BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046631
         (813 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score = 1147 bits (2967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/781 (68%), Positives = 646/781 (82%), Gaps = 26/781 (3%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           IRSRLS +C++G PH A  LFDSI RPTTV+WNTIIIGF+CNN+P +A+L Y++M+ +SP
Sbjct: 40  IRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR-ASP 98

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D+YT+SS LKACA+ R+L++GKA+HCH +R     SR VYNSLLNMYSTCL+  + 
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLT--EV 156

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
             +G  Y   D++  DLV +VFDTMR+RNVVAWNT++SWYVKTER +EA + FR M+RMG
Sbjct: 157 PYLGTAY---DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG 213

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           IRP+ +SFVNVFPA+  + DY +A+V+YGL+VKLGS+YV+D FV SSAIFMYAELGC DF
Sbjct: 214 IRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDF 273

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR+IFD CLERNTEVWNTMIGGYVQNN P+EAI+LFVQV+E ++   DDVTFLSAL+A+S
Sbjct: 274 AREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAIS 333

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
           QLQ LDLG+QLHAYI+K+   L V++LNA+I                    ERDVV+WNT
Sbjct: 334 QLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNT 393

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+SAFVQNGLDDEGLMLV+EMQKQGFM+DSVT+TALLS ASNLR+Q++GKQ HAYL+RHG
Sbjct: 394 MVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG 453

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           I FEGM+ YLIDMYAKSGLI TA+Q+FEKN   DRD+ATWNAMIAGYTQNGL EE F  F
Sbjct: 454 IQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVF 513

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           R+M+E NV PN VT+AS+LPACNPMG I LGKQ+HGF+IR  L+QNVFVGT+L+DMYSKS
Sbjct: 514 RKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKS 573

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G I YA NVFA+  EKNSVTYTTMIL YGQHGM ERALSLF +M G GI+PD++TFVA+L
Sbjct: 574 GAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAIL 633

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACSYAGLVDEGL+IF  M++EYKIQPS+EHYCCVADMLGRVG+V EAYEFVK LGEEGN
Sbjct: 634 SACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGN 693

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              IWGSLLG+CR+HG  EL +VVA KLLEM+  + + GYHVLLSNIYA EGNW+NVD+V
Sbjct: 694 TFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRV 753

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
           RKEMR++GL KE GCSW++V G+VN F S+D +HPQ  +IY+MLE+LAMEM++AG K   
Sbjct: 754 RKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCL 813

Query: 802 N 802
           N
Sbjct: 814 N 814


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score = 1144 bits (2958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/781 (68%), Positives = 647/781 (82%), Gaps = 26/781 (3%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           IRSRLS +C++G PH A  LFDSI RPTTV+WNTIIIGF+CNN+P +A+L Y++M+ +SP
Sbjct: 40  IRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMR-ASP 98

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D+YT+SS LKACA+ R+L++GKA+HCH +R     SR VYNSLLNMYSTCL+  + 
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLT--EV 156

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
             +G  Y   D++  DLV +VFDTMR+RNVVAWNT++SWYVKTER +EA + FR M+RMG
Sbjct: 157 PYLGTAY---DFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG 213

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           IRP+ +SFVNVFPA+  + DY +A+V+YGL+VKLGS++V+D FV SSAIFMYAELGC DF
Sbjct: 214 IRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDF 273

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR+IFD CLERNTEVWNTMIGGYVQNN P+EAI+LFVQV+E ++ V DDVTFLSAL+A+S
Sbjct: 274 AREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAIS 333

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
           QLQ L+LG+QLHAYI+K+   L V++LNA+I                    ERDVV+WNT
Sbjct: 334 QLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNT 393

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+SAFVQNGLDDEGLMLV+ MQKQGFM+DSVT+TALLS ASNLR+Q++GKQ HAYL+RHG
Sbjct: 394 MVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG 453

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           I FEGM+SYLIDMYAKSGLI TA+Q+FEKN   DRD+ATWNAMIAGYTQNGL EE F  F
Sbjct: 454 IQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVF 513

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           R+M+E NV PN VT+AS+LPACNPMG I LGKQ+HGF+IR  L++NVFVGT+L+DMYSKS
Sbjct: 514 RKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKS 573

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G I YA NVFA+  EKNSVTYTTMI  YGQHGM ERALSLF +M G GI+PD++TFVA+L
Sbjct: 574 GAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAIL 633

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACSYAGLVDEGL+IF  M++EYKIQPS EHYCCVADMLGRVG+VVEAYEFVK LGEEGN
Sbjct: 634 SACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGN 693

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              IWGSLLG+CR+HG  EL +VVA KLLEM+  +S+ GYHVLLSNIYA EGNW+NVD+V
Sbjct: 694 TFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRV 753

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
           RKEMR++GL KE GCSW++V G+VN F S+D +HPQ  +IY+MLE+LAMEM++AG K   
Sbjct: 754 RKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCL 813

Query: 802 N 802
           N
Sbjct: 814 N 814


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score = 1135 bits (2936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/835 (65%), Positives = 657/835 (78%), Gaps = 40/835 (4%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLP-QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLAR 59
           MASS+ PLPL       +  P  LP   HS +P     K PTIR RLS++CQEG+ HLAR
Sbjct: 1   MASSATPLPL-------SQSPSHLPLHTHSTNP-----KIPTIRYRLSRLCQEGQLHLAR 48

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           QLFD++ RP+TV+WNTIIIG VCNN P EA+L YS MK SSP   CD+YTYSSVLKACA+
Sbjct: 49  QLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACAD 108

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL-DAEMVGLKYVEVDYSKYDL 178
           TRNL +GKAVH HF+RC  NPSR VYNSLLNMYS C S+  D +MV        YS+ DL
Sbjct: 109 TRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVS------GYSRCDL 162

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
           V KVFDTMR+R VVAWNT+++WYV+TERY EAV+QF MM+++GI+PS +SFVNVFPA SS
Sbjct: 163 VRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSS 222

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           LGD+K+A+VV+G+LVKLGSEYVNDL+V SSAIFMYAELGC +FA+K+FDNCLERNTEVWN
Sbjct: 223 LGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWN 282

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           TMI  +VQNN  +E I+LF Q +E ++   D+VT LSA+SA S LQ+ +L +QLHA++IK
Sbjct: 283 TMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIK 342

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
           N     V V+NA+I                    E+DVVSWNTMISAFVQNGL+DE LML
Sbjct: 343 NVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALML 402

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
            YEM+KQ  M+DSVTVTALLSAAS+LRN D+GKQTH YLLR+GI FEGM+SYLIDMYAKS
Sbjct: 403 FYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYAKS 462

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GLI+ A+ +FEK+ S +RDQATWN+M++GYTQNGL+++AF+  RQML+  V PNVVT+AS
Sbjct: 463 GLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLAS 522

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +LPACNP G I+ GKQLHGFSIR  LDQNVFV T+LIDMYSKSG I +A NVF+K  EK+
Sbjct: 523 ILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKS 582

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            VTY+TMILGYGQHGM E AL +F  M+  GI+PDA+T VAVLSACSYAGLVDEGLQIF+
Sbjct: 583 IVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFE 642

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M+  Y IQPSTEH+CCVADMLGR G+V +AYEFV  LGE+GNV+EIWGSLL +CR+H  
Sbjct: 643 SMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQ 702

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            EL ++VAKKLLEM+  N   GYHVLLSNIYAEE NWENVD VRK+MRERGL+KE G SW
Sbjct: 703 FELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSW 762

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
           I++ GY+N FASKD++HPQS +IY MLE L MEM++AG + +  S +      DE
Sbjct: 763 IEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRPLSTSYLGGFLEPDE 817


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 525/789 (66%), Positives = 633/789 (80%), Gaps = 27/789 (3%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L ++CQEG+ HLARQLFD++ RP+TV+WNTIIIG VCNN P EA+L YS MK SSP   C
Sbjct: 11  LCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 70

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL-DAEMV 164
           D+YTYSSVLKACA+TRNL +GKAVH HF+RC  NPSR VYNSLLNMYS C S+  D +MV
Sbjct: 71  DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 130

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                   YS+ DLV KVFDTMR+R VVAWNT+++WYV+TERY EAV+QF MM+++GI+P
Sbjct: 131 S------GYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKP 184

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           S +SFVNVFPA SSLGD+K+A+VV+G+LVKLGSEYVNDL+V SSAIFMYAELGC +FA+K
Sbjct: 185 SPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKK 244

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FDNCLERNTEVWNTMI  +VQNN  +E I+LF Q +E ++   D+VT LSA+SA S LQ
Sbjct: 245 VFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQ 304

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
           + +L +QLHA++IKN     V V+NA+I                    E+DVVSWNTMIS
Sbjct: 305 KFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMIS 364

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           AFVQNGL+DE LML YEM+KQ  M+DSVTVTALLSAAS+LRN D+GKQTH YLLR+GI F
Sbjct: 365 AFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQF 424

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           EGM+SYLIDMYAKSGLI+ A+ +FEK+ S +RDQATWN+M++GYTQNGL+++AF+  RQM
Sbjct: 425 EGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQM 484

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L+  V PNVVT+AS+LPACNP G I+ GKQLHGFSIR  LDQNVFV T+LIDMYSKSG I
Sbjct: 485 LDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSI 544

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
            +A NVF+K  EK+ VTY+TMILGYGQHGM E AL +F  M+  GI+PDA+T VAVLSAC
Sbjct: 545 AHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC 604

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           SYAGLVDEGLQIF+ M+  Y IQPSTEH+CCVADMLGR G+V +AYEFV  LGE+GNV+E
Sbjct: 605 SYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVME 664

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IWGSLL +CR+H   EL ++VAKKLLEM+  N   GYHVLLSNIYAEE NWENVD VRK+
Sbjct: 665 IWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQ 724

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSN 804
           MRERGL+KE G SWI++ GY+N FASKD++HPQS +IY MLE L MEM++AG + +  S 
Sbjct: 725 MRERGLKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRPLSTSY 784

Query: 805 VDATPRFDE 813
           +      DE
Sbjct: 785 LGGFLEPDE 793


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score = 1083 bits (2801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/785 (64%), Positives = 633/785 (80%), Gaps = 28/785 (3%)

Query: 29  SLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE 88
           + SPP    +TP+IRSRLSKICQEG P LARQLFD+I +PTTV+WNTIIIGF+CNNLP+E
Sbjct: 29  TFSPPTLTPQTPSIRSRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHE 88

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+L YS+MKK++P+T CD YTYSS LKACAET+NL+ GKAVHCH IRC  N SR V+NSL
Sbjct: 89  ALLFYSRMKKTAPFTKCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSL 148

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY +CL++  +E+        D  +YD+V KVFD MRR+NVVAWNT++SWYVKT R  
Sbjct: 149 MNMYVSCLNAPGSEL--------DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNA 200

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA RQF +M+RM I+PS +SFVNVFPA+++    K A+V YGL++KLG EYV DLFV SS
Sbjct: 201 EACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSS 260

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
           AI MYAELG  + +R++FD+C+ERN EVWNTMIG YVQN+  VE+IELF++ +   EIV 
Sbjct: 261 AISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 320

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
           D+VTFL A SAVS LQ+++LG+Q H ++ KNF  LP++++N+++                
Sbjct: 321 DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVF 380

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
               ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF ID +TVTALLSAASNLRN++
Sbjct: 381 HSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 440

Query: 429 VGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           +GKQTH +L+R GI FEGM SYLIDMYAKSGLI+ ++++FE +   +RDQATWN+MI+GY
Sbjct: 441 IGKQTHGFLIRQGIQFEGMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGY 500

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           TQNG  EE F+ FR+MLE N+ PN VT+AS+LPAC+ +G+++LGKQLHGFSIR  LDQNV
Sbjct: 501 TQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNV 560

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           FV ++L+DMYSK+G I YA N+F++  E+NSVTYTTMILGYGQHGM ERA+SLF SM+  
Sbjct: 561 FVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQEL 620

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           GI+PDAI FVAVLSACSY+GLVDEGL+IF+ M++ Y IQPS+EHYCC+ DMLGRVG+V E
Sbjct: 621 GIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCITDMLGRVGRVNE 680

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           AYEFVK LGEEGN+ E+WGSLLGSCRLHG  ELAE V+++L ++D   +  GY VLLSN+
Sbjct: 681 AYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKGKNFSGYEVLLSNM 740

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           YAEE NW++VD+VRK MRE+GL+KEVG S I+V G+VN F S+DQEHP S +IY+ ++ L
Sbjct: 741 YAEEQNWKSVDRVRKGMREKGLKKEVGRSGIEVAGHVNCFVSRDQEHPHSGEIYDAIDGL 800

Query: 789 AMEMR 793
           A  MR
Sbjct: 801 AKNMR 805


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score = 1074 bits (2778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/791 (63%), Positives = 633/791 (80%), Gaps = 32/791 (4%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q     + SPP    +TP+IRSRLSKICQ+G P LARQLFD+I +PTTV+WNTIIIGF+C
Sbjct: 23  QTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFIC 82

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           NNLP+EA+L YS+MKK++P+T+CD YTYSS LKACAET+NL+ GKAVHCH IRC  N SR
Sbjct: 83  NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR 142

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V+NSL+NMY +CL++ D              +YD+V KVFD MRR+NVVAWNT++SWYV
Sbjct: 143 VVHNSLMNMYVSCLNAPDC------------FEYDVVRKVFDNMRRKNVVAWNTLISWYV 190

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           KT R  EA RQF +M+RM ++PS +SFVNVFPA+S     K A+V YGL++KLG EYV D
Sbjct: 191 KTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKD 250

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           LFV SSAI MYAELG  + +R++FD+C+ERN EVWNTMIG YVQN+  VE+IELF++ + 
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
             EIV D+VT+L A SAVS LQ+++LG+Q H ++ KNF  LP++++N+++          
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF ID +TVTALLSAAS
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           NLRN+++GKQTHA+L+R GI FEGM SYLIDMY+KSGLI+ ++++FE +   +RDQATWN
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +MI+GYTQNG  E+ F+ FR+MLE N+ PN VT+AS+LPAC+ +G+++LGKQLHGFSIR 
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LDQNVFV ++L+DMYSK+G I YA ++F++  E+NSVTYTTMILGYGQHGM ERA+SLF
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
            SM+  GI+PDAITFVAVLSACSY+GL+DEGL+IF+ M++ Y IQPS+EHYCC+ DMLGR
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGR 670

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
           VG+V EAYEFVK LGEEGN+ E+WGSLLGSC+LHG  ELAE V+++L + D   +  GY 
Sbjct: 671 VGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYE 730

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           VLLSN+YAEE  W++VDKVR+ MRE+GL+KEVG S I++ GYVN F S+DQEHP S +IY
Sbjct: 731 VLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790

Query: 783 EMLERLAMEMR 793
           ++++ LA +MR
Sbjct: 791 DVIDGLAKDMR 801


>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score = 1018 bits (2633), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/837 (58%), Positives = 620/837 (74%), Gaps = 54/837 (6%)

Query: 9   PLPPPPPTATPPPPQLPQIHSLSPPIP--------KLKTPTIRSRLSKICQEGRPHLARQ 60
           P+ P P + T PP Q   IH+L             K  + +IRSRLSK+C+EG+PHLA  
Sbjct: 14  PIIPLPISTTHPPNQ---IHTLPNQKQKQKQKQWNKAISTSIRSRLSKLCREGQPHLALH 70

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           L DS+ RP+TV+WN++IIGF+CNNLP++A+LLY++M+ +S  ++ D YT+SS LKACA T
Sbjct: 71  LLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKACALT 130

Query: 121 RNLRIGKAVHCHFIRCFSN----PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           +++  GKA+H HF+R  SN    PSR VYNSLLNMY++C                   ++
Sbjct: 131 KDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-------------------QH 171

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +    VFD MRRRNVVAWNT++  +VK  RY +AV  F  M+   + PS ++FVN+FPAL
Sbjct: 172 EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPAL 231

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S LGD ++  + YG + K G +YV+D+FV SSAI M++++GC D+AR +FD CL +NTE+
Sbjct: 232 SKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEI 291

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WNTMI  YVQNN PVEAI++F+Q LE +E V DDVT LS L+AVSQLQ++ L +Q HA++
Sbjct: 292 WNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFV 351

Query: 357 IKNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLDDEGL 396
           IK+     +I+LNAV                    +ERD VSWNT+ISAFVQNG D+E L
Sbjct: 352 IKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEAL 411

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
           MLV EMQKQ F+IDSVT TALLSAASNLRN  VGKQTHAYL+R GI FEGMESYLIDMYA
Sbjct: 412 MLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYA 471

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           KSG I+TA  +FE+N S DRDQATWNA+IAGYTQNGL E+A +  +QML  NV PN VT+
Sbjct: 472 KSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTL 531

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           AS+LPAC+ MG++ L +QLHGFSIR  L++NV+VGTSL D YSK G I+YA NVF + PE
Sbjct: 532 ASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPE 591

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KNSVTYTTM++ YGQHGM +RAL+L+ SM   GI PDA+TFVA+LSAC+Y+GLVDEGLQI
Sbjct: 592 KNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQI 651

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M++ +KI+PS EHYCCVADMLGRVG+VVEAYEFVK LGE+ N +EIWGSLLGSCR H
Sbjct: 652 FESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNH 711

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           GH EL + VAKKLL M     M GYHVLLSNIYAEEG WE VD+VRK+M+E+GL KE GC
Sbjct: 712 GHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGC 771

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
           SW+++ G+VN F S+D++HPQS +IY ML+ L ++M+ AG K   + N++     DE
Sbjct: 772 SWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGYKPQYSLNLNTILDSDE 828


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/643 (68%), Positives = 544/643 (84%), Gaps = 20/643 (3%)

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L+ KVF TM +R+V+AWNT+VSWYVKTERYVEA+RQFR+M++ GI+PS +SFVNVFPA+S
Sbjct: 52  LLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAIS 111

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+GD+K+A+V+YG+L+KLG+EY NDLFV SSAI MYAELGC D  RK+FD+CLE++ EVW
Sbjct: 112 SVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVW 171

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMIGG++QNN  +E + LF+Q ++ +  + DDVTFLSAL+AVSQLQ L LGQQ+HA+ +
Sbjct: 172 NTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTM 231

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           KN   L V VLNA++                    E+DVVSWNTMIS F+QNGLD+EGLM
Sbjct: 232 KNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLM 291

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           LVYEMQKQGF+ DSVTVT+LLSAASNLRN+++GKQTHAYL+RHGI F+GM+SYLIDMYAK
Sbjct: 292 LVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSYLIDMYAK 351

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           SGLI+ ++++FE N+  +RDQATWNA+IAGYTQNGL+E+AF+ FR MLE N+ PN VT+A
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLA 411

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           S+LPAC+ +G+I LGKQLHG SIRY LDQN+FV T+L+DMYSKSG INYA +VF +  E+
Sbjct: 412 SILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSER 471

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           NSVTYTTMILGYGQHGM E ALSLF SMK  GI+PDAITFVAVLSACSYAGLVDEGL+IF
Sbjct: 472 NSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIF 531

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           + M++++KIQPST HYCCVADMLGRVG+V+EAYEFVK+LGEEG+V+EIWGSLLG+CRLHG
Sbjct: 532 ESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHG 591

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           H EL E V+ +LLEM++ + + GY VLLSN+YAEE NWE VDK+RK MRE+GLRKEVGCS
Sbjct: 592 HIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCS 651

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTI 800
           WID GG + RF SKD++H +  +IYEMLERLAMEM +  +K++
Sbjct: 652 WIDTGGLLVRFVSKDKDHTRCEEIYEMLERLAMEMEDNDHKSL 694



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 261/561 (46%), Gaps = 63/561 (11%)

Query: 3   SSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPT-IRSRLSKICQEGRPHLARQL 61
           SS++P PL  P           P + ++SPP         IRSRLS+        L  ++
Sbjct: 5   SSALPFPLSTPYHHTDNINHNNPSLFTISPPPNPTPKTPTIRSRLSR--------LLHKV 56

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F ++ +   + WNT++  +V      EAI  +  M K     S    ++ +V  A +   
Sbjct: 57  FKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPS--PVSFVNVFPAISSVG 114

Query: 122 NLRIGKAVHCHFIRCFSNPSR--FVYNSLLNMYST--CLSSLDAEMVGLKYVEVDYSKYD 177
           + +    ++   ++  +  +   FV +S ++MY+   CL                    D
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCL--------------------D 154

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPAL 236
           L  KVFD+   ++   WNT++  +++   ++E V  F   ++        ++F++   A+
Sbjct: 155 LCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAV 214

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L        ++   +K  +  V  + V ++ + MY+       + ++F+   E++   
Sbjct: 215 SQLQCLGLGQQMHAFTMK--NHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVS 272

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WNTMI G++QN    E + + V  ++    + D VT  S LSA S L+  ++G+Q HAY+
Sbjct: 273 WNTMISGFIQNGLDEEGL-MLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYL 331

Query: 357 IKNFVALP---------------------VIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           I++ +                        V   N +  RD  +WN +I+ + QNGL ++ 
Sbjct: 332 IRHGIKFDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQA 391

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
            +    M +Q    ++VT+ ++L A S+L + ++GKQ H   +R+ +     + + L+DM
Sbjct: 392 FITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDM 451

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+KSG I  A  +F +  S +R+  T+  MI GY Q+G+ E A   F  M +  + P+ +
Sbjct: 452 YSKSGAINYAESVFTQ--SSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAI 509

Query: 515 TIASVLPACNPMGNIELGKQL 535
           T  +VL AC+  G ++ G ++
Sbjct: 510 TFVAVLSACSYAGLVDEGLRI 530



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 238/520 (45%), Gaps = 86/520 (16%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +S   + G   L R++FDS    +  +WNT+I G + NN   E + L+ Q  K + 
Sbjct: 140 VSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMK-TE 198

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           +T  D+ T+ S L A ++ + L +G+ +H   ++  +  S  V N++L MYS C S    
Sbjct: 199 HTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNS---- 254

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                  V+  +       +VF+ M  ++VV+WNT++S +++     E +     M + G
Sbjct: 255 -------VQTSF-------EVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQG 300

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
               +++  ++  A S+L + +     +  L++ G ++     + S  I MYA+ G    
Sbjct: 301 FIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG---MDSYLIDMYAKSGLIRI 357

Query: 282 ARKIFD--NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           ++++F+  N   R+   WN +I GY QN    +A   F  +LE   +  + VT  S L A
Sbjct: 358 SQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLE-QNLRPNAVTLASILPA 416

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSW 379
            S L  ++LG+QLH   I+  +   + V  A++                    ER+ V++
Sbjct: 417 CSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTY 476

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
            TMI  + Q+G+ +  L L + M+K G   D++T  A+LSA S                 
Sbjct: 477 TTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACS----------------- 519

Query: 440 HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ---ATWNAMIAGYTQNGLLEE 496
                          YA  GL+    +IFE      + Q   A +  +     + G + E
Sbjct: 520 ---------------YA--GLVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIE 562

Query: 497 AFVAFRQMLEHNVTPNVVTI-ASVLPACNPMGNIELGKQL 535
           A+   +Q+ E     +V+ I  S+L AC   G+IELG+++
Sbjct: 563 AYEFVKQLGEEG---HVIEIWGSLLGACRLHGHIELGEEV 599


>gi|356499507|ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Glycine max]
          Length = 755

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/786 (54%), Positives = 564/786 (71%), Gaps = 81/786 (10%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           +IRSRLSK+CQ+G+PHLAR L D++ R ++ +WNT+IIGF+CN++P EA+ LY++MK SS
Sbjct: 24  SIRSRLSKLCQQGQPHLARHLLDTLPRASSAVWNTVIIGFICNHMPLEALHLYAEMK-SS 82

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           P T  D YT+SS LKAC+ T+NL  GKA+H HF+R  SN SR VYNSLLNMYS CL    
Sbjct: 83  PDTPSDCYTFSSTLKACSLTQNLLAGKAIHSHFLRSQSN-SRIVYNSLLNMYSVCLPPST 141

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            +           S+ D V KVF  MR+RNVVAWNT++SWYVKT R + A+R F  +++ 
Sbjct: 142 VQ-----------SQLDYVLKVFAFMRKRNVVAWNTLISWYVKTHRQLHALRAFATLIKT 190

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            I P+ ++FVNVFPA+    D K+A + Y LL+K G++Y ND+F  SSAI M+A+LGC D
Sbjct: 191 SITPTPVTFVNVFPAVP---DPKTALMFYALLLKFGADYANDVFAVSSAIVMFADLGCLD 247

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +AR +FD C  +NTEVWNTMIGGYVQNN P++ I++F++ LE +E V D+VTFLS + AV
Sbjct: 248 YARMVFDRCSNKNTEVWNTMIGGYVQNNCPLQGIDVFLRALESEEAVCDEVTFLSVICAV 307

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           S LQ++ L QQLHA+++K+    PVIV+NA++                    +RD VSWN
Sbjct: 308 SLLQQIKLAQQLHAFVLKSLAVTPVIVVNAIMVMYSRCNFVDTSLKVFDNMPQRDAVSWN 367

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           T+IS+FVQNGLD+E LMLV EM+KQ F IDSVT TALLSAASN+R+  +G+QTHAYL+RH
Sbjct: 368 TIISSFVQNGLDEEALMLVCEMEKQKFPIDSVTATALLSAASNIRSSYIGRQTHAYLIRH 427

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           GI FEGMESYLIDMYAKS L++T+  +FE+N   DRD ATWNAMIAGYTQNGL ++A + 
Sbjct: 428 GIQFEGMESYLIDMYAKSRLVRTSELLFEQNCPSDRDLATWNAMIAGYTQNGLSDKAILI 487

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
            R+ L H V PN VT+AS+LPAC+ MG+    +QLH F+IR+  D               
Sbjct: 488 LREALVHKVMPNAVTLASILPACSSMGSTTFARQLHAFAIRHSDDXXX------------ 535

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
                                                AL+L+ SM  CGI+PDA+TFVA+
Sbjct: 536 ---------------------------------XXXXALALYDSMLRCGIKPDAVTFVAI 562

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACSY+GLV+EGL IF+ M + ++++PS EHYCCVADMLGRVG+VVEAYEFV+ LGE+G
Sbjct: 563 LSACSYSGLVEEGLHIFESMDKVHQVKPSIEHYCCVADMLGRVGRVVEAYEFVQRLGEDG 622

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           N +EIWGS+LG+C+ HG+ EL +V+A+KLL M+T   + GYHVLLSNIYAEEG WENVD+
Sbjct: 623 NAIEIWGSILGACKNHGYFELGKVIAEKLLNMETEKRIAGYHVLLSNIYAEEGEWENVDR 682

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTI 800
           VR +M+E+GL+KE+GCSW+++ G VN F S+D++HPQS +IY +L++L M+M++AG K  
Sbjct: 683 VRNQMKEKGLQKEMGCSWVEIAGCVNFFVSRDEKHPQSGEIYYILDKLTMDMKDAGYKPC 742

Query: 801 QNSNVD 806
            NSN++
Sbjct: 743 NNSNLN 748


>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
 gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
          Length = 804

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/773 (49%), Positives = 527/773 (68%), Gaps = 46/773 (5%)

Query: 44  SRLSKICQEGR-PHLARQLFDSITRPT-TVIWNTIIIGFVCNNLPYEAILLYSQMKKSS- 100
           S++ K+C++GR  H  R L +++ RP  T++ N ++I +    LP EA+ LY+ +  ++ 
Sbjct: 39  SQVKKLCKQGRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAAR 98

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVY-NSLLNMYSTCLSS 158
           P    D+YTYS+ L ACA +R LR+G++VH H +R   S P   V  NSLLN+Y++ +  
Sbjct: 99  PPVRSDHYTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSV-- 156

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                   +Y E   ++ D+V ++FD M +RNVV+WNT+  WYVKT R  EA+  F  ML
Sbjct: 157 --------RYRE---ARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML 205

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
             G RP+ +SFVN+FPA  ++ D  S    +YGLLVK G EY+NDLFV SSAI M++E G
Sbjct: 206 EDGFRPTPVSFVNIFPA--AVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFG 263

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
               AR++FD   ++NTEVWNTMI GYVQN    EAI+LF ++L   E+  D VTFLSAL
Sbjct: 264 DVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSAL 323

Query: 338 SAVSQLQELDLGQQLHAYIIKNF-VALPVIVLNAVI--------------------ERDV 376
           +A SQ Q++ LGQQLH Y+IK     LPVI+ NA++                    E+D+
Sbjct: 324 TAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDI 383

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+WNTM++AF+QN  D EGL+LVYEMQK GF  DSVT+TA+LSA+SN  +  +GKQ H Y
Sbjct: 384 VTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGY 443

Query: 437 LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           L+RHGI  EG+ESYLIDMYAKSG ++ A+++F+   +  RD+ TWNAMIAGYTQ+G  E+
Sbjct: 444 LIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEK 503

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           A + FR MLE  + P  VT+ASVLPAC+P+ G +  GKQ+H F++R  LD NVFVGT+LI
Sbjct: 504 AILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALI 563

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMYSK G I  A NVF  +  K++VTYTTMI G GQHG  ++AL+LF SM+  G++PDA+
Sbjct: 564 DMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAV 623

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF++ +SAC+Y+GLVDEGL ++  M   + I  + +H+CCVAD+L + G+V EAYEF++ 
Sbjct: 624 TFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYEFIEG 682

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           LGEEGN + IWGSLL SC+  G  ELA++V KKLL+++ +    GY VLLS + A E NW
Sbjct: 683 LGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNW 742

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDV--GGYVNRFASKDQEHPQSHKIYEMLE 786
            + D +RKEMR RGL+KE G SWI V      ++F  KDQ + ++  ++ +L+
Sbjct: 743 NSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSILD 795


>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  727 bits (1877), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/782 (48%), Positives = 529/782 (67%), Gaps = 47/782 (6%)

Query: 36  KLKTPTIRSRLSKICQEGR-PHLARQLFDSITRPT-TVIWNTIIIGFVCNNLPYEAILLY 93
           K +T    +++ K+C++GR  H  R L D++ RP  T++ N ++I +V   LP  A+ LY
Sbjct: 26  KGRTQLAVAQVKKLCKQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLY 85

Query: 94  SQMKKSS-PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVY-NSLLN 150
           + +  ++ P    D+YTYS  L ACA +R LR+G++VH H +R   S P   V  NSLLN
Sbjct: 86  ALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLN 145

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           +Y++C       +             D+V ++FD M ++NVV+WNT+  WYVKT R  EA
Sbjct: 146 LYASCARHRRGGV-------------DVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEA 192

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  F  ML  G+RP+ +SFVNVFPA  S GD     ++YGLL+K G EYVNDLFV SSAI
Sbjct: 193 LEMFARMLEDGVRPTPVSFVNVFPAAGS-GDPSWPFLLYGLLIKHGVEYVNDLFVVSSAI 251

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            M++E+     AR +FD   ++N EVWNTMI GYVQN    +A++LF+Q+L   E+  D 
Sbjct: 252 GMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDV 311

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNF-VALPVIVLNAVI----------------- 372
           VTFLSA++A SQ Q++ LGQQLH Y++K     LPVI+ NA++                 
Sbjct: 312 VTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFD 371

Query: 373 ---ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
              E+D+VSWNTMI+AFVQN  D EGL+LVY+MQK GF+ D+VT+TA+LSAASN  +  +
Sbjct: 372 RLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQI 431

Query: 430 GKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           GKQ+H YL+RHGI  EG+ESYLIDMY+KSG I  A+++F+   + DRD+ TWNAMIAGYT
Sbjct: 432 GKQSHGYLIRHGIEGEGLESYLIDMYSKSGRIDMAQRVFDGYGN-DRDEVTWNAMIAGYT 490

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNV 548
           Q+G  E+A + FR M+E  V P  VT+ASVLPAC+P+G  +  GKQ+H F++R+ LD NV
Sbjct: 491 QSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNV 550

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           FVGT+L+DMYSK G I+ A NVF  + EK++VTYTTMI G GQHG  ERALSLF SM+  
Sbjct: 551 FVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDK 610

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           G++PDA+TF+A +SAC+Y+GLVDEGL ++  M+  + +  + +H+CC+ D+L + G+V E
Sbjct: 611 GLKPDAVTFLAAISACNYSGLVDEGLSLYRSMET-FGLAATPQHHCCIVDLLAKAGRVDE 669

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           AY+FV+ LGE+GN + IWGSLL SC+  G  ELA    +K+L ++ +    GY+VLLS +
Sbjct: 670 AYDFVESLGEDGNFIAIWGSLLASCKAQGKMELAAWATEKVLNIEKQYGHAGYNVLLSQL 729

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV--GGYVNRFASKD--QEHPQSHKIYEM 784
           +A EGNW + D +RKEMR RGLRKE G +WI V      +R   ++  Q+ P++  ++ M
Sbjct: 730 FAAEGNWSSADSLRKEMRLRGLRKEAGSTWIKVQSAALQDRSTERNRKQDFPENEHVFSM 789

Query: 785 LE 786
           L+
Sbjct: 790 LD 791


>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
          Length = 804

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/773 (49%), Positives = 525/773 (67%), Gaps = 46/773 (5%)

Query: 44  SRLSKICQEGR-PHLARQLFDSITRPT-TVIWNTIIIGFVCNNLPYEAILLYSQMKKSS- 100
           S++ K+C++GR  H  R L +++ RP  T++ N ++I +    L  EA+ L + +  ++ 
Sbjct: 39  SQVKKLCKQGRLDHARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAAR 98

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVY-NSLLNMYSTCLSS 158
           P    D+YTYS+ L ACA +R LR+G++VH H +R   S P   V  NSLLN+Y++ +  
Sbjct: 99  PPVRSDHYTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSV-- 156

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                   +Y E   ++ D+V ++FD M +RNVV+WNT+  WYVKT R  EA+  F  ML
Sbjct: 157 --------RYRE---ARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRML 205

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
             G RP+ +SFVN+FPA  ++ D  S    +YGLLVK G EY+NDLFV SSAI M++E G
Sbjct: 206 EDGFRPTPVSFVNIFPA--AVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFG 263

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
               AR++FD   ++NTEVWNTMI GYVQN    EAI+LF ++L   E+  D VTFLSAL
Sbjct: 264 DVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSAL 323

Query: 338 SAVSQLQELDLGQQLHAYIIKNF-VALPVIVLNAVI--------------------ERDV 376
           +A SQ Q++ LGQQLH Y+IK     LPVI+ NA++                    E+D+
Sbjct: 324 TAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDI 383

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+WNTM++AF+QN  D EGL+LVYEMQK GF  DSVT+TA+LSA+SN  +  +GKQ H Y
Sbjct: 384 VTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGY 443

Query: 437 LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           L+RHGI  EG+ESYLIDMYAKSG ++ A+++F+   +  RD+ TWNAMIAGYTQ+G  E+
Sbjct: 444 LIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEK 503

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           A + FR MLE  + P  VT+ASVLPAC+P+ G +  GKQ+H F++R  LD NVFVGT+LI
Sbjct: 504 AILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALI 563

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMYSK G I  A NVF  +  K++VTYTTMI G GQHG  ++AL+LF SM+  G++PDA+
Sbjct: 564 DMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAV 623

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF++ +SAC+Y+GLVDEGL ++  M   + I  + +H+CCVAD+L + G+V EAYEF++ 
Sbjct: 624 TFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYEFIEG 682

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           LGEEGN + IWGSLL SC+  G  ELA++V KKLL+++ +    GY VLLS + A E NW
Sbjct: 683 LGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNW 742

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDV--GGYVNRFASKDQEHPQSHKIYEMLE 786
            + D +RKEMR RGL+KE G SWI V      ++F  KDQ + ++  ++ +L+
Sbjct: 743 NSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEHMFSILD 795


>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Brachypodium distachyon]
          Length = 779

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/780 (48%), Positives = 524/780 (67%), Gaps = 45/780 (5%)

Query: 13  PPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGR-PHLARQLFDSITRPT-T 70
           PP  A  PPP   +  +      K +T    +++ K+C++GR  H  R L D++ RP  T
Sbjct: 3   PPQCAASPPPAPTKAATAGGGGGKSRTQLAATQVKKLCKQGRLEHARRLLLDALPRPPPT 62

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYSSVLKACAETRNLRIGKAV 129
           ++ N ++I +V   LP  A+ LY  +  ++ P    D+YTYS  L ACA +R LR+G++V
Sbjct: 63  LLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYTYSCALTACARSRRLRLGRSV 122

Query: 130 HCHFIR-CFSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR 187
           H H +R   S P   V  NSLLN+Y++C                 +   D+V ++FD   
Sbjct: 123 HAHLLRRARSLPDTAVLRNSLLNLYASC-------------ARYRHGGVDVVRRLFDATP 169

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           +RNVV+WNT+V WYVKT R  EA+  F  ML  GIRP+ +SFVNVFPA +S  D      
Sbjct: 170 KRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAAS-DDPSWPFF 228

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           +YG+L+K G EYV+DLFV SSAI M++E+G    AR +FD+  ++N EVWNTMI GYVQN
Sbjct: 229 LYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQN 288

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA-LPVI 366
               EA++LF+Q++    +  D VTFLSA++A SQ Q+  LGQQLH Y++K   + LPVI
Sbjct: 289 GQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMKGMRSTLPVI 348

Query: 367 VLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           + NA++                    E+D+VSWNTM++AFVQN  D EGL+LVY+M K G
Sbjct: 349 LGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSG 408

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQ 466
           F+ D+VT+TA+LSAASN  +  +GKQ+H YL+RHGI  EG+ESYLI+MY+KSG I  A++
Sbjct: 409 FVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLINMYSKSGHIDMAQR 468

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+   + DRD+ TWNAMIAGYTQ+G  E+A +AFR M+E  V P  VT+ASVLPAC P+
Sbjct: 469 VFDGYGN-DRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPV 527

Query: 527 G-NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           G  ++ GKQ+H F++R+ LD N+FVGT+L+DMYSK G I  A NVF ++ EK++VTYTTM
Sbjct: 528 GEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTM 587

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I G GQHG  +RAL LF SM+  G++PDA+TF+A +SAC+Y+GLVDEGL ++  M + + 
Sbjct: 588 ISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSM-ETFG 646

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           +  + +H+CC+ D+L + G+V EAY+FV+ LGE+GN + IWGSLL SC+  G  EL   V
Sbjct: 647 LSATPQHHCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTAFV 706

Query: 706 AKKLLEMDTR--NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
             KLL ++ +  ++  GY+VLLS ++A EGNW + D +R+EMR RGLRK+VG SWI V G
Sbjct: 707 TDKLLNIEKQYGHAHAGYNVLLSQLFAAEGNWSSADSLRREMRVRGLRKDVGSSWIKVQG 766


>gi|242074230|ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
 gi|241938234|gb|EES11379.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
          Length = 818

 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/784 (48%), Positives = 517/784 (65%), Gaps = 47/784 (5%)

Query: 10  LPPPP--PTATPPPPQLPQIHSLSPPIPKLKT---PTIRSRLSKICQEGRPHLARQLFDS 64
           + P P    + PPPP      S S     +K    PT  S++ ++C++GR   AR+L   
Sbjct: 29  MSPAPRCSVSLPPPPTNASTTSTSGGGGGMKAQRHPTA-SQVRRLCKQGRLDGARRLLLD 87

Query: 65  ITRPTTVI--WNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYSSVLKACAETR 121
                     +N ++I +V  +LP  A+ LY+ +  ++ P    D+YTYS  L ACA TR
Sbjct: 88  ALPRPPPPPLYNALLIAYVARSLPEHALRLYALLNHAARPAPRSDHYTYSCALTACARTR 147

Query: 122 NLRIGKAVHCHFIR-CFSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
            LR+GK+VH H +R   S P   V  NSLLN+Y++C+       V            D+V
Sbjct: 148 RLRLGKSVHAHLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGGV------------DVV 195

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            ++FD M +RN V+WNT+  WYVKT R  EA+  F  ML  GI+P+ +SFVNVFPA++  
Sbjct: 196 RRLFDVMPKRNAVSWNTLFGWYVKTGRPQEALELFARMLEDGIKPTPVSFVNVFPAVAK- 254

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            D   + V+YGLLVK G EYVNDLFV SSAI M++ELG    A ++F+   ++NTEVWNT
Sbjct: 255 EDPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMFSELGDLQSAWRVFEYTAKKNTEVWNT 314

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI GYVQN    EA++L ++++   E+  D VTFLSAL+A SQ Q+  LGQQLH Y+IK 
Sbjct: 315 MITGYVQNGKFAEAMDLVIRLMGSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIKG 374

Query: 360 FVA-LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
             A LPVI+ NA++                    E+D+VSWNTM++AFVQN  D EGL+L
Sbjct: 375 THATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEGLLL 434

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
           VY+MQK  F  DSVT+TA+LSAASN  +  +GKQ H YL+R GI  EG+ESYLIDMYAKS
Sbjct: 435 VYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDEGLESYLIDMYAKS 494

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G I+ A+++F+   +  RD+ TWNAMIAGYTQ+G  E+A + FR ML+ ++ P  VT+AS
Sbjct: 495 GRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTLAS 554

Query: 519 VLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           VLPAC+P+ G +  GKQ+H F++R  LD NVFVGT+L+DMYSK G I+ A +VFA + EK
Sbjct: 555 VLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAVMIEK 614

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           ++V+YTTMI G GQHG  ERALSLF  M+  G++PD +TF+A +SAC+Y+GLVDEGL ++
Sbjct: 615 STVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNYSGLVDEGLALY 674

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
             M+  + +  + +H CC+ DML + G+V EAYEFV+ELGEEGN + IWGSLL SC+   
Sbjct: 675 RSMET-FGVAVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGNFISIWGSLLVSCKAQD 733

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
             EL  +  ++LL ++ +    GY+VLLS+I+A EGNW + D +RKEMR RGLRK  G S
Sbjct: 734 KQELVNLATERLLCIEKKYGHAGYNVLLSHIFAAEGNWSSADSLRKEMRLRGLRKMAGSS 793

Query: 758 WIDV 761
           WI V
Sbjct: 794 WIKV 797


>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
          Length = 829

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/776 (48%), Positives = 510/776 (65%), Gaps = 43/776 (5%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVI--WNTIIIGFVCNNLPYEAIL 91
           +  L+ PT  S++ ++C++GR   AR L             +N ++I +V   LP  A+ 
Sbjct: 61  MKALRHPTA-SQVRRLCKQGRLDGARLLLLDALPSPPPPPLYNALLIAYVARALPEHALR 119

Query: 92  LYSQMKKSS-PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVY-NSL 148
           LY+ +  ++ P    D+YTYS  L ACA TR LR+GK+VH H +R   S P   V  NSL
Sbjct: 120 LYALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVLRNSL 179

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           LN+Y++C+       V            D+V ++FD M +RN V+WNT+  WYVKT R  
Sbjct: 180 LNVYASCVRYRGDGSV------------DVVRRLFDAMPKRNAVSWNTLFGWYVKTGRPQ 227

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+  F  ML  GI+P+ +SFVNVFPA++   D   + V+YGLLVK G EYVNDLFV SS
Sbjct: 228 EALEMFVRMLEDGIKPTPVSFVNVFPAVAK-EDPSWSFVLYGLLVKHGMEYVNDLFVVSS 286

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
           AI M++ELG    A ++F+   ++NTEVWNTMI GYVQN    EA+ L ++++   E+  
Sbjct: 287 AIVMFSELGDVQSAWRVFEYAAKKNTEVWNTMITGYVQNGKFAEAMGLVIRLMVSKEVPL 346

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNF-VALPVIVLNAVI--------------- 372
           D VTFLSAL+A SQ Q+  LGQQLH Y+IK     LPVI+ NA++               
Sbjct: 347 DVVTFLSALTAASQSQDGRLGQQLHGYLIKGMHTTLPVILGNALVVMYSRCGNVQTAFEL 406

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                E+D+VSWNTMI+AFVQN  D EGL+LVY+MQK GF  D VT+TA+LSAASN  + 
Sbjct: 407 FDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDL 466

Query: 428 DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            +GKQ H+YL+RHGI  EG+ESYLIDMYAKSG I+ A+++F+   +  RD+ TWNAMIAG
Sbjct: 467 HIGKQAHSYLIRHGIEGEGLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAG 526

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQ 546
           YTQ G  E+A +AFR M+E  + P  VT+ASVLPAC+P+ G +  GKQ+H F++R  LD 
Sbjct: 527 YTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDT 586

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           NVFVGT+L+DMYSK G I+ A +VFA + EK++V+YTTMI G GQHG  + ALSLF SM+
Sbjct: 587 NVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQ 646

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
             G++PD +TF+A +SAC+Y+GLVDEGL ++  M+  + +  + +H CC+ DML + G+V
Sbjct: 647 EKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMET-FGVVVTPQHRCCIVDMLAKAGRV 705

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            EAYEFV+ELGEEG+ + IWG+LL SC+     EL  +V ++L+ ++ +    GY VLLS
Sbjct: 706 EEAYEFVQELGEEGDFVSIWGTLLASCKAQDKQELVNLVTERLICIEKKYGHAGYSVLLS 765

Query: 727 NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG-GYVNRFASKDQEHPQSHKI 781
           +I+A EGNW + D +RKEMR RGL K  G SWI V    +  +     EH   H +
Sbjct: 766 HIFAAEGNWSSADSLRKEMRLRGLSKMAGSSWIKVQHAALQSYPKNGHEHSLLHVV 821


>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
          Length = 674

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/666 (51%), Positives = 462/666 (69%), Gaps = 41/666 (6%)

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSLLN+Y++ +          +Y E   ++ D+V ++FD M +RNVV+WNT+  WYVKT 
Sbjct: 16  NSLLNLYASSV----------RYRE---ARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTG 62

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLF 264
           R  EA+  F  ML  G RP+ +SFVN+FPA  ++ D  S    +YGLLVK G EY+NDLF
Sbjct: 63  RPQEALELFVRMLEDGFRPTPVSFVNIFPA--AVADDPSWPFQLYGLLVKYGVEYINDLF 120

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V SSAI M++E G    AR++FD   ++NTEVWNTMI GYVQN    EAI+LF ++L   
Sbjct: 121 VVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSR 180

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF-VALPVIVLNAVI----------- 372
           E+  D VTFLSAL+A SQ Q++ LGQQLH Y+IK     LPVI+ NA++           
Sbjct: 181 EVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQT 240

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                    E+D+V+WNTM++AF+QN  D EGL+LVYEMQK GF  DSVT+TA+LSA+SN
Sbjct: 241 AFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSN 300

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
             +  +GKQ H YL+RHGI  EG+ESYLIDMYAKSG ++ A+++F+   +  RD+ TWNA
Sbjct: 301 TGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNA 360

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM-GNIELGKQLHGFSIRY 542
           MIAGYTQ+G  E+A + FR MLE  + P  VT+ASVLPAC+P+ G +  GKQ+H F++R 
Sbjct: 361 MIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRR 420

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD NVFVGT+LIDMYSK G I  A NVF  +  K++VTYTTMI G GQHG  ++AL+LF
Sbjct: 421 CLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALF 480

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
            SM+  G++PDA+TF++ +SAC+Y+GLVDEGL ++  M   + I  + +H+CCVAD+L +
Sbjct: 481 NSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAK 539

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            G+V EAYEF++ LGEEGN + IWGSLL SC+  G  ELA++V KKLL+++ +    GY 
Sbjct: 540 AGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYS 599

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV--GGYVNRFASKDQEHPQSHK 780
           VLLS + A E NW + D +RKEMR RGL+KE G SWI V      ++F  KDQ + ++  
Sbjct: 600 VLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWIKVQNAALEHKFIEKDQNYVENEH 659

Query: 781 IYEMLE 786
           ++ +L+
Sbjct: 660 MFSILD 665



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/490 (25%), Positives = 226/490 (46%), Gaps = 48/490 (9%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +    + G    AR++FD   +  T +WNT+I G+V N    EAI L+S++  S  
Sbjct: 122 VSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSRE 181

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLD 160
               D  T+ S L A ++++++ +G+ +H + I+        +  N+L+ MYS C +   
Sbjct: 182 -VPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQT 240

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A              +DL    FD +  +++V WNT+V+ +++ +  +E +     M + 
Sbjct: 241 A--------------FDL----FDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKS 282

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G    +++   V  A S+ GD +     +G L++ G E      + S  I MYA+ G  +
Sbjct: 283 GFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEG---LESYLIDMYAKSGRVE 339

Query: 281 FARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            A+++FD+    +R+   WN MI GY Q+  P +AI +F  +LE   +    VT  S L 
Sbjct: 340 MAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPTSVTLASVLP 398

Query: 339 AVSQL-QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVV 377
           A   +   +  G+Q+H + ++  +   V V  A+I+                    +  V
Sbjct: 399 ACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTV 458

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           ++ TMIS   Q+G   + L L   MQ++G   D+VT  + +SA +     D G   +  +
Sbjct: 459 TYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSM 518

Query: 438 LRHGIHFEGMESYLI-DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
              GI         + D+ AK+G ++ A +  E         A W +++A     G  E 
Sbjct: 519 DSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQEL 578

Query: 497 AFVAFRQMLE 506
           A +  +++L+
Sbjct: 579 AKLVTKKLLD 588


>gi|224089601|ref|XP_002308773.1| predicted protein [Populus trichocarpa]
 gi|222854749|gb|EEE92296.1| predicted protein [Populus trichocarpa]
          Length = 465

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/437 (70%), Positives = 364/437 (83%), Gaps = 26/437 (5%)

Query: 32  PPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL 91
           PP P LKTP+IRSRLSK+CQEG+PH+A QLFD+  RPTTVI NTIIIGF+CNNLP EAIL
Sbjct: 35  PPSPSLKTPSIRSRLSKLCQEGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAIL 94

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            YS++K SS  T  D+YTYSS LKACAETR+L+IG+A+HCH IRC SNPSR VYNSLLNM
Sbjct: 95  FYSKLKSSSLGTKFDSYTYSSTLKACAETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNM 154

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
           YS+CLS++      L Y+  DYSKYDLV KVFDTMR+R+VVAWNT+VSWYVKTERYVEA+
Sbjct: 155 YSSCLSNVGC----LSYL--DYSKYDLVHKVFDTMRKRDVVAWNTMVSWYVKTERYVEAI 208

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
           R FR++++MGI+PS +SFVNVFPA SS+ D+K+A+ +YG+LVK+GSEYVNDLFV SSAIF
Sbjct: 209 RLFRLVMKMGIKPSPVSFVNVFPAFSSVEDFKNANALYGMLVKMGSEYVNDLFVVSSAIF 268

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           M+AELG  DFARK+FD+CLE+NTE+WNTMIGGYVQNN  +E I+LF++ +E ++ V DDV
Sbjct: 269 MFAELGHIDFARKVFDHCLEKNTEIWNTMIGGYVQNNLLIEGIDLFLKAVETEQTVLDDV 328

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------- 372
           TFLS L+AVSQLQ LDL QQ HA++IKN    PV++ NA+I                   
Sbjct: 329 TFLSVLTAVSQLQCLDLAQQQHAFVIKNLAVFPVMITNAIIVMYSRCNSVHTSFEVFEKM 388

Query: 373 -ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ERDVVSWNTMISAFVQNG+DDEGLMLVYEMQKQGF IDSVTVTALLSAASNLR+Q++GK
Sbjct: 389 VERDVVSWNTMISAFVQNGMDDEGLMLVYEMQKQGFAIDSVTVTALLSAASNLRSQEIGK 448

Query: 432 QTHAYLLRHGIHFEGME 448
           QT+AYLLRHGI FEGM+
Sbjct: 449 QTYAYLLRHGIQFEGMD 465



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 193/403 (47%), Gaps = 52/403 (12%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI--VFDDVTFLSALSA 339
           A ++FD      T + NT+I G++ NN P+EAI LF   L+   +   FD  T+ S L A
Sbjct: 61  ALQLFDTFPRPTTVICNTIIIGFICNNLPLEAI-LFYSKLKSSSLGTKFDSYTYSSTLKA 119

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------------- 372
            ++ + L +G+ +H ++I+       IV N+++                           
Sbjct: 120 CAETRSLKIGRAIHCHLIRCLSNPSRIVYNSLLNMYSSCLSNVGCLSYLDYSKYDLVHKV 179

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                +RDVV+WNTM+S +V+     E + L   + K G     V+   +  A S++ + 
Sbjct: 180 FDTMRKRDVVAWNTMVSWYVKTERYVEAIRLFRLVMKMGIKPSPVSFVNVFPAFSSVEDF 239

Query: 428 DVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
                 +  L++ G  +     + S  I M+A+ G I  AR++F+     +++   WN M
Sbjct: 240 KNANALYGMLVKMGSEYVNDLFVVSSAIFMFAELGHIDFARKVFDH--CLEKNTEIWNTM 297

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           I GY QN LL E    F + +E   T  + VT  SVL A + +  ++L +Q H F I+ L
Sbjct: 298 IGGYVQNNLLIEGIDLFLKAVETEQTVLDDVTFLSVLTAVSQLQCLDLAQQQHAFVIKNL 357

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
               V +  ++I MYS+   ++ +  VF K+ E++ V++ TMI  + Q+GM +  L L  
Sbjct: 358 AVFPVMITNAIIVMYSRCNSVHTSFEVFEKMVERDVVSWNTMISAFVQNGMDDEGLMLVY 417

Query: 604 SMKGCGIEPDAITFVAVLSACS-----------YAGLVDEGLQ 635
            M+  G   D++T  A+LSA S           YA L+  G+Q
Sbjct: 418 EMQKQGFAIDSVTVTALLSAASNLRSQEIGKQTYAYLLRHGIQ 460


>gi|396582353|gb|AFN88216.1| pentatricopeptide repeat-containing protein [Phaseolus vulgaris]
          Length = 499

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 285/463 (61%), Positives = 366/463 (79%), Gaps = 20/463 (4%)

Query: 364 PVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
           P+IV+NA+I                    ERD VSWNT+I++FVQNGLD+E LMLV EMQ
Sbjct: 30  PIIVVNAIIVMYSRCSSVDTSFKVFEKMSERDGVSWNTIITSFVQNGLDEEALMLVCEMQ 89

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
           KQ F IDSVTVTALLSAASN+R+  +G+QTHAYL+RHGI FEGMESYLIDMYAKSGLI T
Sbjct: 90  KQRFTIDSVTVTALLSAASNMRDSYIGRQTHAYLIRHGIQFEGMESYLIDMYAKSGLITT 149

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           +  +FE+N   DRD A+WNAMIAGYTQNGL ++A +  R+ L   VTPN VT+AS+LP+C
Sbjct: 150 SELLFEQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREALVRKVTPNAVTLASILPSC 209

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           + MG+  + +QLHGFSIR LLD+NV+VGT+L+D YSK G I+YA NVF +   KNSVTYT
Sbjct: 210 SSMGSTAIARQLHGFSIRQLLDENVYVGTALVDAYSKLGAISYAENVFIRTLAKNSVTYT 269

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           TMI+ YGQHGM +RAL+L+ SM   GI+PDA+TF+A+LSACSY+GLV+EGL IF+ M + 
Sbjct: 270 TMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSACSYSGLVEEGLHIFESMDKI 329

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           +KI+PSTEHYCCVADMLGRVG+VVEAYEFV+ LGE+G+ +EIWGS+LG+C+ HG+ EL +
Sbjct: 330 HKIKPSTEHYCCVADMLGRVGRVVEAYEFVERLGEDGDAVEIWGSILGACKNHGYFELGK 389

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           VVA+KLL M     + GYHVLLSNIYAEEG WENVD+VR +M+E+GL+KE+ CSW+++ G
Sbjct: 390 VVAEKLLNMGMEKRIAGYHVLLSNIYAEEGEWENVDRVRNQMKEKGLQKEMACSWVEIAG 449

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
            VN F ++D++HP S +IY +L++L  +M + G K   +SN++
Sbjct: 450 RVNYFVARDEKHPLSGEIYYILDKLTRDMMDVGYKPGYSSNLN 492



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 160/316 (50%), Gaps = 34/316 (10%)

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
           ++ G+L  +G   V  + V ++ I MY+     D + K+F+   ER+   WNT+I  +VQ
Sbjct: 18  LIRGVLSIVG---VTPIIVVNAIIVMYSRCSSVDTSFKVFEKMSERDGVSWNTIITSFVQ 74

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP-- 364
           N    EA+ L  + ++      D VT  + LSA S +++  +G+Q HAY+I++ +     
Sbjct: 75  NGLDEEALMLVCE-MQKQRFTIDSVTVTALLSAASNMRDSYIGRQTHAYLIRHGIQFEGM 133

Query: 365 -------------------VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
                              +   N   +RD+ SWN MI+ + QNGL D+ ++++ E   +
Sbjct: 134 ESYLIDMYAKSGLITTSELLFEQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREALVR 193

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIK 462
               ++VT+ ++L + S++ +  + +Q H + +R  +    + G  + L+D Y+K G I 
Sbjct: 194 KVTPNAVTLASILPSCSSMGSTAIARQLHGFSIRQLLDENVYVG--TALVDAYSKLGAIS 251

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A  +F +  +  ++  T+  MI  Y Q+G+ + A   +  ML   + P+ VT  ++L A
Sbjct: 252 YAENVFIRTLA--KNSVTYTTMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSA 309

Query: 523 CNPMGNIELGKQLHGF 538
           C+  G +E G  LH F
Sbjct: 310 CSYSGLVEEG--LHIF 323



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 170/399 (42%), Gaps = 70/399 (17%)

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V N+++ MYS C                  S  D   KVF+ M  R+ V+WNTI++ +V
Sbjct: 32  IVVNAIIVMYSRC------------------SSVDTSFKVFEKMSERDGVSWNTIITSFV 73

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     EA+     M +      +++   +  A S++ D       +  L++ G ++   
Sbjct: 74  QNGLDEEALMLVCEMQKQRFTIDSVTVTALLSAASNMRDSYIGRQTHAYLIRHGIQFEG- 132

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
             + S  I MYA+ G    +  +F+     +R+   WN MI GY QN    +AI +  + 
Sbjct: 133 --MESYLIDMYAKSGLITTSELLFEQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREA 190

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           L + ++  + VT  S L + S +    + +QLH + I+  +   V V  A+++       
Sbjct: 191 L-VRKVTPNAVTLASILPSCSSMGSTAIARQLHGFSIRQLLDENVYVGTALVDAYSKLGA 249

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        ++ V++ TMI ++ Q+G+    L L   M + G   D+VT  A+LSA
Sbjct: 250 ISYAENVFIRTLAKNSVTYTTMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSA 309

Query: 421 ASNLRNQDVGKQTHAYLLRHGIH-FEGMESY------------LIDMYAKSGLIKTARQI 467
            S           ++ L+  G+H FE M+              + DM  + G +  A + 
Sbjct: 310 CS-----------YSGLVEEGLHIFESMDKIHKIKPSTEHYCCVADMLGRVGRVVEAYEF 358

Query: 468 FEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            E+  + GD  +  W +++     +G  E   V   ++L
Sbjct: 359 VERLGEDGDAVE-IWGSILGACKNHGYFELGKVVAEKLL 396



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 138/285 (48%), Gaps = 28/285 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F+ ++    V WNTII  FV N L  EA++L  +M+K     + D+ T +++L A + 
Sbjct: 52  KVFEKMSERDGVSWNTIITSFVQNGLDEEALMLVCEMQKQR--FTIDSVTVTALLSAASN 109

Query: 120 TRNLRIGKAVHCHFIRC---FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            R+  IG+  H + IR    F     +    L++MY+       +E++  +    D    
Sbjct: 110 MRDSYIGRQTHAYLIRHGIQFEGMESY----LIDMYAKSGLITTSELLFEQNGPSD---- 161

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                       R++ +WN +++ Y +     +A+   R  L   + P+ ++  ++ P+ 
Sbjct: 162 ------------RDLASWNAMIAGYTQNGLSDKAILILREALVRKVTPNAVTLASILPSC 209

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SS+G    A  ++G  ++   +   +++V ++ +  Y++LG   +A  +F   L +N+  
Sbjct: 210 SSMGSTAIARQLHGFSIRQLLD--ENVYVGTALVDAYSKLGAISYAENVFIRTLAKNSVT 267

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           + TMI  Y Q+     A+ L+  +L    I  D VTF++ LSA S
Sbjct: 268 YTTMIMSYGQHGMGKRALALYDSMLR-SGIKPDAVTFIAILSACS 311


>gi|224089599|ref|XP_002308772.1| predicted protein [Populus trichocarpa]
 gi|222854748|gb|EEE92295.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/312 (77%), Positives = 276/312 (88%)

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIAGYTQ+GL+EEAFV FRQMLE NV PN VT+A++LPACNP+GNI+LGKQLHG SIR L
Sbjct: 1   MIAGYTQHGLVEEAFVTFRQMLEKNVMPNAVTLATILPACNPVGNIDLGKQLHGVSIRLL 60

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           LD+N+FV TSL+DMYSKSG INYA +VF K+P+KNSVTYTTMIL YGQHGM ERALSLF 
Sbjct: 61  LDKNIFVSTSLVDMYSKSGSINYAESVFTKLPDKNSVTYTTMILAYGQHGMGERALSLFH 120

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
           SMK  GIEPDAITF+AVLSACS++GLVDEGLQIF+ M++++KIQPST HYCCV DMLGRV
Sbjct: 121 SMKKSGIEPDAITFIAVLSACSHSGLVDEGLQIFESMEKDFKIQPSTPHYCCVTDMLGRV 180

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G+VVEAYEFVK+LGE GNVLEIWGSLLG+CRLH H EL EVVAKKLLEM+   ++ GYHV
Sbjct: 181 GRVVEAYEFVKQLGEAGNVLEIWGSLLGACRLHEHVELGEVVAKKLLEMEKTGNITGYHV 240

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIYAEEGNW NVDKVR+EMRE+GL+KEVG SWID+GG V RF SKDQ+HP S KIYE
Sbjct: 241 LLSNIYAEEGNWVNVDKVRREMREKGLQKEVGSSWIDIGGSVARFTSKDQDHPHSDKIYE 300

Query: 784 MLERLAMEMRNA 795
           ML  LAMEM+ +
Sbjct: 301 MLAGLAMEMKKS 312



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 9/158 (5%)

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA----YL 437
           MI+ + Q+GL +E  +   +M ++  M ++VT+  +L A + + N D+GKQ H      L
Sbjct: 1   MIAGYTQHGLVEEAFVTFRQMLEKNVMPNAVTLATILPACNPVGNIDLGKQLHGVSIRLL 60

Query: 438 LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           L   I    + + L+DMY+KSG I  A  +F K    D++  T+  MI  Y Q+G+ E A
Sbjct: 61  LDKNIF---VSTSLVDMYSKSGSINYAESVFTKLP--DKNSVTYTTMILAYGQHGMGERA 115

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
              F  M +  + P+ +T  +VL AC+  G ++ G Q+
Sbjct: 116 LSLFHSMKKSGIEPDAITFIAVLSACSHSGLVDEGLQI 153



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 3/168 (1%)

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
           +++ Y +     EA   FR ML   + P+ ++   + PA + +G+      ++G+ ++L 
Sbjct: 1   MIAGYTQHGLVEEAFVTFRQMLEKNVMPNAVTLATILPACNPVGNIDLGKQLHGVSIRLL 60

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
            +   ++FV++S + MY++ G  ++A  +F    ++N+  + TMI  Y Q+     A+ L
Sbjct: 61  LD--KNIFVSTSLVDMYSKSGSINYAESVFTKLPDKNSVTYTTMILAYGQHGMGERALSL 118

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           F   ++   I  D +TF++ LSA S    +D G Q+   + K+F   P
Sbjct: 119 F-HSMKKSGIEPDAITFIAVLSACSHSGLVDEGLQIFESMEKDFKIQP 165



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 45/247 (18%)

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-- 357
           MI GY Q+    EA   F Q+LE + ++ + VT  + L A + +  +DLG+QLH   I  
Sbjct: 1   MIAGYTQHGLVEEAFVTFRQMLEKN-VMPNAVTLATILPACNPVGNIDLGKQLHGVSIRL 59

Query: 358 ---KN-FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
              KN FV+  ++              V   + +++ V++ TMI A+ Q+G+ +  L L 
Sbjct: 60  LLDKNIFVSTSLVDMYSKSGSINYAESVFTKLPDKNSVTYTTMILAYGQHGMGERALSLF 119

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMES--------- 449
           + M+K G   D++T  A+LSA S           H+ L+  G+  FE ME          
Sbjct: 120 HSMKKSGIEPDAITFIAVLSACS-----------HSGLVDEGLQIFESMEKDFKIQPSTP 168

Query: 450 ---YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
               + DM  + G +  A +  ++          W +++     +  +E   V  +++LE
Sbjct: 169 HYCCVTDMLGRVGRVVEAYEFVKQLGEAGNVLEIWGSLLGACRLHEHVELGEVVAKKLLE 228

Query: 507 HNVTPNV 513
              T N+
Sbjct: 229 MEKTGNI 235



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 20/165 (12%)

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +I G+  + L  EA + + QM + +   +    T +++L AC    N+ +GK +H   IR
Sbjct: 1   MIAGYTQHGLVEEAFVTFRQMLEKNVMPNA--VTLATILPACNPVGNIDLGKQLHGVSIR 58

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
              + + FV  SL++MYS   S        + Y E           VF  +  +N V + 
Sbjct: 59  LLLDKNIFVSTSLVDMYSKSGS--------INYAE----------SVFTKLPDKNSVTYT 100

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           T++  Y +      A+  F  M + GI P  I+F+ V  A S  G
Sbjct: 101 TMILAYGQHGMGERALSLFHSMKKSGIEPDAITFIAVLSACSHSG 145


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/632 (38%), Positives = 370/632 (58%), Gaps = 33/632 (5%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           R N V W   +  YVK   + +A+R +  M R GI P  + F++V  A  S  D ++   
Sbjct: 82  RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  ++  G E  +D+ V ++   MY + G  + AR++FD   +R+   WN +I GY QN
Sbjct: 142 VHEDIIARGFE--SDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
             P EA+ LF + ++++ I  +  T +S +   + L  L+ G+Q+H Y I++ +   V+V
Sbjct: 200 GQPYEALALFSE-MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +N ++                     RDV SWN +I  +  N    E L     MQ +G 
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---SYLIDMYAKSGLIKTA 464
             +S+T+ ++L A ++L   + G+Q H Y +R G  FE  +   + L++MYAK G + +A
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSG--FESNDVVGNALVNMYAKCGNVNSA 376

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
            ++FE+     ++   WNA+I+GY+Q+G   EA   F +M    + P+   I SVLPAC 
Sbjct: 377 YKLFERMPK--KNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACA 434

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
               +E GKQ+HG++IR   + NV VGT L+D+Y+K G +N A  +F ++PE++ V++TT
Sbjct: 435 HFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTT 494

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MIL YG HG  E AL+LF  M+  G + D I F A+L+ACS+AGLVD+GLQ F  M+ +Y
Sbjct: 495 MILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDY 554

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            + P  EHY C+ D+LGR G + EA   +K +  E +   +WG+LLG+CR+H + EL E 
Sbjct: 555 GLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDA-NVWGALLGACRIHCNIELGEQ 613

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            AK L E+D  N+  GY+VLLSNIYAE   WE+V K+RK M+E+G++K+ GCS + V   
Sbjct: 614 AAKHLFELDPDNA--GYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRD 671

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V  F   D+ HPQS +IY MLE L  +MR AG
Sbjct: 672 VQTFLVGDRTHPQSEQIYAMLEILYEQMRKAG 703



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/451 (33%), Positives = 238/451 (52%), Gaps = 35/451 (7%)

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           +  N  VW   I GYV+N    +A+ L+ Q ++   I  D + FLS + A     +L  G
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQ-MQRTGINPDKLVFLSVIKACGSQSDLQAG 139

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +++H  II       VIV  A+                     +RDVVSWN +I+ + QN
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQN 199

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           G   E L L  EMQ  G   +S T+ +++   ++L   + GKQ H Y +R GI  + +  
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L++MYAK G + TA ++FE+     RD A+WNA+I GY+ N    EA   F +M    
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPI--RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG 317

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           + PN +T+ SVLPAC  +  +E G+Q+HG++IR   + N  VG +L++MY+K G +N A 
Sbjct: 318 IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F ++P+KN V +  +I GY QHG    AL+LF  M+  GI+PD+   V+VL AC++  
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +++G QI       Y I+   E    V     D+  + G V  A +  + + E+  V  
Sbjct: 438 ALEQGKQI-----HGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVS- 491

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
            W +++ +  +HGH E A  +  K+ E  T+
Sbjct: 492 -WTTMILAYGIHGHGEDALALFSKMQETGTK 521



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/600 (27%), Positives = 280/600 (46%), Gaps = 85/600 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q   +  R   V+W   IIG+V N    +A+ LY QM+++    + D   + SV+KAC  
Sbjct: 75  QFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG--INPDKLVFLSVIKACGS 132

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +L+ G+ VH   I         V  +L +MY+ C S  +A                  
Sbjct: 133 QSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENAR----------------- 175

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            +VFD M +R+VV+WN I++ Y +  +  EA+  F  M   GI+P++ + V+V P  + L
Sbjct: 176 -QVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHL 234

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              +    ++   ++ G E  +D+ V +  + MYA+ G  + A K+F+    R+   WN 
Sbjct: 235 LALEQGKQIHCYAIRSGIE--SDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNA 292

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +IGGY  N+   EA+  F + +++  I  + +T +S L A + L  L+ GQQ+H Y I++
Sbjct: 293 IIGGYSLNSQHHEALAFFNR-MQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRS 351

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
                 +V NA++                    +++VV+WN +IS + Q+G   E L L 
Sbjct: 352 GFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALF 411

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYA 456
            EMQ QG   DS  + ++L A ++    + GKQ H Y +R G  FE    + + L+D+YA
Sbjct: 412 IEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG--FESNVVVGTGLVDIYA 469

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G + TA+++FE+    ++D  +W  MI  Y  +G  E+A   F +M E     + +  
Sbjct: 470 KCGNVNTAQKLFERMP--EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAF 527

Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            ++L AC+  G ++ G Q        Y L   +     L+D+  ++G ++ A  +     
Sbjct: 528 TAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGI----- 582

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                                        +K   +EPDA  + A+L AC     ++ G Q
Sbjct: 583 -----------------------------IKNMSLEPDANVWGALLGACRIHCNIELGEQ 613



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 234/484 (48%), Gaps = 72/484 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYTSCDNYTYSSVLK 115
           ARQ+FD + +   V WN II G+  N  PYEA+ L+S+M+ +   P +S    T  SV+ 
Sbjct: 174 ARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS----TLVSVMP 229

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            CA    L  GK +HC+ IR        V N L+NMY+ C                    
Sbjct: 230 VCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKC------------------GN 271

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            +   K+F+ M  R+V +WN I+  Y    ++ EA+  F  M   GI+P++I+ V+V PA
Sbjct: 272 VNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPA 331

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            + L   +    ++G  ++ G E  ND+ V ++ + MYA+ G  + A K+F+   ++N  
Sbjct: 332 CAHLFALEQGQQIHGYAIRSGFE-SNDV-VGNALVNMYAKCGNVNSAYKLFERMPKKNVV 389

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +I GY Q+ HP EA+ LF++ ++   I  D    +S L A +    L+ G+Q+H Y
Sbjct: 390 AWNAIISGYSQHGHPHEALALFIE-MQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGY 448

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            I++     V+V   ++                    E+DVVSW TMI A+  +G  ++ 
Sbjct: 449 TIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDA 508

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMES----- 449
           L L  +MQ+ G  +D +  TA+L+A S           HA L+  G+ +F+ M+S     
Sbjct: 509 LALFSKMQETGTKLDHIAFTAILTACS-----------HAGLVDQGLQYFQCMKSDYGLA 557

Query: 450 -------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
                   L+D+  ++G +  A  I  KN S + D   W A++     +  +E    A +
Sbjct: 558 PKLEHYACLVDLLGRAGHLDEANGII-KNMSLEPDANVWGALLGACRIHCNIELGEQAAK 616

Query: 503 QMLE 506
            + E
Sbjct: 617 HLFE 620



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 191/362 (52%), Gaps = 21/362 (5%)

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I  + V W   I  +V+NG  ++ L L Y+MQ+ G   D +   +++ A  +  +   G+
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 432 QTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           + H  ++  G  FE    + + L  MY K G ++ ARQ+F++     RD  +WNA+IAGY
Sbjct: 141 KVHEDIIARG--FESDVIVGTALASMYTKCGSLENARQVFDRMPK--RDVVSWNAIIAGY 196

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           +QNG   EA   F +M  + + PN  T+ SV+P C  +  +E GKQ+H ++IR  ++ +V
Sbjct: 197 SQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDV 256

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
            V   L++MY+K G +N A  +F ++P ++  ++  +I GY  +     AL+ F  M+  
Sbjct: 257 LVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR 316

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVG 664
           GI+P++IT V+VL AC++   +++G QI       Y I+   E    V     +M  + G
Sbjct: 317 GIKPNSITMVSVLPACAHLFALEQGQQI-----HGYAIRSGFESNDVVGNALVNMYAKCG 371

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
            V  AY+  + + ++ NV+  W +++     HGH   A  +    +EM  +   P    +
Sbjct: 372 NVNSAYKLFERMPKK-NVVA-WNAIISGYSQHGHPHEALAL---FIEMQAQGIKPDSFAI 426

Query: 725 LS 726
           +S
Sbjct: 427 VS 428



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 183/406 (45%), Gaps = 36/406 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + A +LF+ +       WN II G+  N+  +EA+  +++M+        ++ T  S
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRG--IKPNSITMVS 327

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA    L  G+ +H + IR     +  V N+L+NMY+ C                 
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC----------------- 370

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               +   K+F+ M ++NVVAWN I+S Y +     EA+  F  M   GI+P + + V+V
Sbjct: 371 -GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA +     +    ++G  ++ G E  +++ V +  + +YA+ G  + A+K+F+   E+
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRSGFE--SNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ 487

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W TMI  Y  + H  +A+ LF ++ E      D + F + L+A S    +D G Q 
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQETG-TKLDHIAFTAILTACSHAGLVDQGLQY 546

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              +  ++   P           +  +  ++    + G  DE   ++  M  +    D+ 
Sbjct: 547 FQCMKSDYGLAP----------KLEHYACLVDLLGRAGHLDEANGIIKNMSLEP---DAN 593

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
              ALL A     N ++G+Q   +L        G    L ++YA++
Sbjct: 594 VWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEA 639


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/760 (33%), Positives = 417/760 (54%), Gaps = 49/760 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A+Q F        V++N +I     +    EA   Y +M+  S   + +  TY S+L AC
Sbjct: 283  AKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMR--SDGVALNRTTYLSILNAC 340

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            + ++ L  GK +H H      +    + N+L++MY+ C     A                
Sbjct: 341  STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR--------------- 385

Query: 178  LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               ++F TM +R++++WN I++ Y + E   EA+R ++ M   G++P  ++F+++  A +
Sbjct: 386  ---ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACA 442

Query: 238  SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   Y    +++  +++ G +  ++  +A++ + MY   G    A+ +F+    R+   W
Sbjct: 443  NSSAYADGKMIHEDILRSGIK--SNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500

Query: 298  NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            N+MI G+ Q+     A +LF Q ++ +E+  D++TF S LS     + L+LG+Q+H  I 
Sbjct: 501  NSMIAGHAQHGSYETAYKLF-QEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRIT 559

Query: 358  KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            ++ + L V + NA+I                     RDV+SW  MI      G D + + 
Sbjct: 560  ESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIE 619

Query: 398  LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
            L ++MQ +GF     T +++L   ++    D GK+  AY+L  G   + G+ + LI  Y+
Sbjct: 620  LFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYS 679

Query: 457  KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            KSG +  AR++F+K  S  RD  +WN +IAGY QNGL + A     QM E +V PN  + 
Sbjct: 680  KSGSMTDAREVFDKMPS--RDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSF 737

Query: 517  ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             S+L AC+    +E GK++H   ++  L  +V VG +LI MY+K G    A  VF  I E
Sbjct: 738  VSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIE 797

Query: 577  KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            KN VT+  MI  Y QHG++ +AL  F  M+  GI+PD  TF ++LSAC++AGLV EG QI
Sbjct: 798  KNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQI 857

Query: 637  FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
            F  M+ EY + P+ EHY C+  +LGR  +  EA   + ++    +   +W +LLG+CR+H
Sbjct: 858  FSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDA-AVWETLLGACRIH 916

Query: 697  GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            G+  LAE  A   L+++ RN  P  ++LLSN+YA  G W++V K+R+ M  RG+RKE G 
Sbjct: 917  GNIALAEHAANNALKLNARN--PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGR 974

Query: 757  SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SWI+V   ++ F + D+ HP++ +IY  L+RL++EM  AG
Sbjct: 975  SWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 1014



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 192/719 (26%), Positives = 337/719 (46%), Gaps = 52/719 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F  + R   + WN++I  +       +A  L+ +M+ +      +  TY S+L AC
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP--NKITYISILTAC 138

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H   I+        V NSLL+MY  C     A                
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR--------------- 183

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  +  R+VV++NT++  Y +     E +  F  M   GI P  ++++N+  A +
Sbjct: 184 ---QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +         ++ L V+ G    +D+ V ++ + M    G  D A++ F    +R+  V+
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLN--SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVY 298

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I    Q+ H VEA E + + +  D +  +  T+LS L+A S  + L+ G+ +H++I 
Sbjct: 299 NALIAALAQHGHNVEAFEQYYR-MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           ++  +  V + NA+I                    +RD++SWN +I+ + +     E + 
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
           L  +MQ +G     VT   LLSA +N      GK  H  +LR GI   G + + L++MY 
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +  A+ +FE   +  RD  +WN+MIAG+ Q+G  E A+  F++M    + P+ +T 
Sbjct: 478 RCGSLMEAQNVFEGTQA--RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITF 535

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL  C     +ELGKQ+HG      L  +V +G +LI+MY + G +  A NVF  +  
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH 595

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ +++T MI G    G   +A+ LF  M+  G  P   TF ++L  C+ +  +DEG ++
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKV 655

Query: 637 FD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
              ++   Y++     +   +     + G + +A E   ++     V   W  ++     
Sbjct: 656 IAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSRDIV--SWNKIIAGYAQ 711

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +G  + A   A ++ E D   +   +  LL N  +     E   +V  E+ +R L+ +V
Sbjct: 712 NGLGQTAVEFAYQMQEQDVVPNKFSFVSLL-NACSSFSALEEGKRVHAEIVKRKLQGDV 769



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/617 (28%), Positives = 295/617 (47%), Gaps = 49/617 (7%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           T  +  TY ++L+ C   R L   K +H   +  +  P  F+ N L+NMY  C S LDA 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                             +VF  M RR+V++WN+++S Y +     +A + F  M   G 
Sbjct: 83  ------------------QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGF 124

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P+ I+++++  A  S  + ++   ++  ++K G  Y  D  V +S + MY + G    A
Sbjct: 125 IPNKITYISILTACYSPAELENGKKIHSQIIKAG--YQRDPRVQNSLLSMYGKCGDLPRA 182

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++F     R+   +NTM+G Y Q  +  E + LF Q +  + I  D VT+++ L A + 
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQ-MSSEGISPDKVTYINLLDAFTT 241

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
              LD G+++H   ++  +   + V  A++                    +RDVV +N +
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+A  Q+G + E     Y M+  G  ++  T  ++L+A S  +  + GK  H+++   G 
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG- 360

Query: 443 HFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           H   ++  + LI MYA+ G +  AR++F       RD  +WNA+IAGY +     EA   
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPK--RDLISWNAIIAGYARREDRGEAMRL 418

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           ++QM    V P  VT   +L AC        GK +H   +R  +  N  +  +L++MY +
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  A NVF     ++ +++ +MI G+ QHG  E A  LF+ M+   +EPD ITF +V
Sbjct: 479 CGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASV 538

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LS C     ++ G QI   +  E  +Q        + +M  R G + +A      L +  
Sbjct: 539 LSGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHR 596

Query: 681 NVLEIWGSLLGSCRLHG 697
           +V+  W +++G C   G
Sbjct: 597 DVMS-WTAMIGGCADQG 612



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 6/291 (2%)

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           +  T  ALL   +  R     K+ HA ++   +  +  + + LI+MY K   +  A Q+F
Sbjct: 26  ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++     RD  +WN++I+ Y Q G  ++AF  F +M      PN +T  S+L AC     
Sbjct: 86  KEMPR--RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E GK++H   I+    ++  V  SL+ MY K G +  A  VFA I  ++ V+Y TM+  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y Q    +  L LF  M   GI PD +T++ +L A +   ++DEG +I  L  +E  +  
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNS 262

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
                  +  M  R G V  A +  K   +   V  ++ +L+ +   HGH+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVV--VYNALIAALAQHGHN 311



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           +L T    + +S   + G    AR++FD +     V WN II G+  N L   A+    Q
Sbjct: 665 ELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQ 724

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M++       + +++ S+L AC+    L  GK VH   ++        V  +L++MY+ C
Sbjct: 725 MQEQDVVP--NKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKC 782

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            S  +A+                  +VFD +  +NVV WN +++ Y +     +A+  F 
Sbjct: 783 GSQGEAQ------------------EVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFN 824

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            M + GI+P   +F ++  A +  G
Sbjct: 825 CMEKEGIKPDGSTFTSILSACNHAG 849


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/835 (31%), Positives = 445/835 (53%), Gaps = 104/835 (12%)

Query: 13  PPPTATPPPP--QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTT 70
           PP   T PPP  Q P    L+   P    PT  SR                       +T
Sbjct: 23  PPSLQTQPPPSIQKPTASPLTSKTPP--KPTSPSR-----------------------ST 57

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
             W   +     +N   EAI  Y +M  S      DN+ + +VLKA +  ++L+ G+ +H
Sbjct: 58  ASWVDALRSRTRSNDFREAISTYIEMTVSGARP--DNFAFPAVLKAVSGLQDLKTGEQIH 115

Query: 131 CHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
              ++  + + S  V N+L+NMY  C    D                  VCKVFD +  R
Sbjct: 116 AAAVKFGYGSSSVTVANTLVNMYGKCGGIGD------------------VCKVFDRITDR 157

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG---DYKSAD 246
           + V+WN+ ++   + E++ +A+  FR M    +  S+ + V+V  A S+LG     +   
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGK 217

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++G  +++G +     F  ++ + MYA+LG  D ++ +F++ ++R+   WNTMI  + Q
Sbjct: 218 QLHGYSLRVGDQKT---FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQ 274

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------- 359
           ++   EA+  F +++ L+ +  D VT  S L A S L+ LD+G+++HAY+++N       
Sbjct: 275 SDRFSEALAFF-RLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENS 333

Query: 360 FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK- 404
           FV   ++              V + ++ R +  WN MIS + +NGLD++ L+L  EM K 
Sbjct: 334 FVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKV 393

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKT 463
            G + ++ T+ +++ A  +       +  H Y ++ G   +  +++ L+DMY++ G +  
Sbjct: 394 AGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDI 453

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT------------- 510
           +  IF+  +   RD+ +WN MI GY  +G    A V   +M     T             
Sbjct: 454 SETIFDSMEV--RDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKG 511

Query: 511 ----PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
               PN +T+ +VLP C  +  I  GK++H ++IR +L  ++ VG++L+DMY+K G +N 
Sbjct: 512 GPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNL 571

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-----KGCGIEPDAITFVAVL 621
           +  VF ++P KN +T+  +I+  G HG  E AL LF++M     +G   +P+ +TF+ V 
Sbjct: 572 SRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 631

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           +ACS++GL+ EGL +F  M+ ++ ++P+++HY CV D+LGR G++ EAYE V  +  E +
Sbjct: 632 AACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFD 691

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            +  W SLLG+CR+H + EL EV AK LL ++   ++  ++VLLSNIY+  G W    +V
Sbjct: 692 KVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP--NVASHYVLLSNIYSSAGLWNKAMEV 749

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RK MR+ G++KE GCSWI+    V++F + D  HPQS +++  LE L+ +MR  G
Sbjct: 750 RKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEG 804


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 263/778 (33%), Positives = 431/778 (55%), Gaps = 51/778 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYSSVLKA 116
           A +LFD +   T   WN +I  +V N  P  ++ LY +M+ S  P  +C   T+  +LKA
Sbjct: 169 AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDAC---TFPCILKA 225

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   ++ R G  VH   I+       FV NS++ MY+ C      ++ G +         
Sbjct: 226 CGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKC-----NDLNGAR--------- 271

Query: 177 DLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
               ++FD M  + +VV+WN+++S Y    + +EA+R F  M +  + P+T +FV    A
Sbjct: 272 ----QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 327

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
                  K    ++  ++K  S Y  ++FVA++ I MYA  G    A  IF N  + +T 
Sbjct: 328 CEDSSFIKQGMFIHATVLK--SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 385

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+M+ G+VQN    EA++ + ++ +  +   D V  +S ++A ++      G Q+HAY
Sbjct: 386 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP-DLVAVISIIAASARSGNTLNGMQIHAY 444

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            +KN +   + V N++++                    +DVVSW T+I+   QNG     
Sbjct: 445 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 504

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L  E+Q +G  +D + ++++L A S L+     K+ H+Y++R G+    +++ ++D+Y
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVY 564

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            + G +  A ++FE  +   +D  +W +MI+ Y  NGL  EA   F  M E  V P+ ++
Sbjct: 565 GECGNVDYAARMFELIEF--KDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 622

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S+L A   +  ++ GK++HGF IR        + ++L+DMY++ G +  + NVF  I 
Sbjct: 623 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 682

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K+ V +T+MI  YG HG    A+ LFR M+   I PD I FVAVL ACS++GL++EG +
Sbjct: 683 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 742

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             + M+ EY+++P  EHY C+ D+LGR   + EAY+FVK +  E    E+W +LLG+C++
Sbjct: 743 FLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTA-EVWCALLGACQI 801

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + EL E+ A+KLLEMD  N  PG +VL+SN+YA E  W++V++VR  M+  GL+K  G
Sbjct: 802 HSNKELGEIAAQKLLEMDPEN--PGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPG 859

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
           CSWI+VG  V+ F ++D+ HPQS++IY  L ++  ++   G    Q   V    + +E
Sbjct: 860 CSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEE 917



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 215/754 (28%), Positives = 361/754 (47%), Gaps = 105/754 (13%)

Query: 12  PPPPTATPPPPQLPQIHSLSP------PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI 65
           P P       P L +IH   P      P+  ++TP++R    +IC+ G      + F S+
Sbjct: 47  PIPSFYLNCHPVLKKIHQNPPLKISKFPLKPVETPSLR----EICKRGS---VNEAFQSL 99

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
           T                        L  +Q    SP     +  YSSVL+ C   + L  
Sbjct: 100 TD-----------------------LFANQ----SPSQFSLDEAYSSVLELCGSKKALSE 132

Query: 126 GKAVHCHFIRCFSNP---SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           G+ VH H I   SN    S F+   L+ MY  C   +DAE                  K+
Sbjct: 133 GQQVHAHMIT--SNALFNSVFLSTRLVFMYGKCGCLVDAE------------------KL 172

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD M  + +  WN ++  YV     + ++  +R M   GI     +F  +  A   L D 
Sbjct: 173 FDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDR 232

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMI 301
           +    V+GL +K G  YV+ +FVA+S + MY +    + AR++FD   E+   V WN+MI
Sbjct: 233 RCGAEVHGLAIKEG--YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 290

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             Y  N   +EA+ LF + ++   +  +  TF++AL A      +  G  +HA ++K+  
Sbjct: 291 SAYSSNGQSIEALRLFGE-MQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 349

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            + V V NA+I                    + D +SWN+M+S FVQNGL  E L   +E
Sbjct: 350 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 409

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           M+  G   D V V ++++A++   N   G Q HAY +++G+  +  + + L+DMYAK   
Sbjct: 410 MRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 469

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +K    IF+K    D+D  +W  +IAG+ QNG    A   FR++    +  +V+ I+S+L
Sbjct: 470 MKYMDCIFDKMP--DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 527

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+ +  I   K++H + IR  L  ++ +   ++D+Y + G ++YAA +F  I  K+ V
Sbjct: 528 LACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 586

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-L 639
           ++T+MI  Y  +G++  AL LF  MK  G+EPD+I+ V++LSA +    + +G +I   L
Sbjct: 587 SWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFL 646

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVG---KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           +++ + ++ S      + DM  R G   K    + F++        L +W S++ +  +H
Sbjct: 647 IRKGFVLEGSLAS--TLVDMYARCGTLEKSRNVFNFIRN-----KDLVLWTSMINAYGMH 699

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           G    A  + ++   M+  +  P +   ++ +YA
Sbjct: 700 GCGRAAIDLFRR---MEDESIAPDHIAFVAVLYA 730



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 219/487 (44%), Gaps = 69/487 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  +F ++    T+ WN+++ GFV N L +EA+  Y +M+ +      D     S
Sbjct: 367 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP--DLVAVIS 424

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A A + N   G  +H + ++   +    V NSL++MY        A+   +KY++  
Sbjct: 425 IIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMY--------AKFCSMKYMDC- 475

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +FD M  ++VV+W TI++ + +   +  A+  FR +   GI    +   ++
Sbjct: 476 ---------IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 526

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L    S   ++  +++ G   ++DL + +  + +Y E G  D+A ++F+    +
Sbjct: 527 LLACSGLKLISSVKEIHSYIIRKG---LSDLVLQNGIVDVYGECGNVDYAARMFELIEFK 583

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W +MI  YV N    EA+ELF  +++   +  D ++ +S LSA + L  L  G+++
Sbjct: 584 DVVSWTSMISCYVHNGLANEALELF-HLMKETGVEPDSISLVSILSAAASLSALKKGKEI 642

Query: 353 HAYII-KNFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H ++I K FV    +                   V N +  +D+V W +MI+A+  +G  
Sbjct: 643 HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 702

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGM---- 447
              + L   M+ +    D +   A+L A S           H+ L+  G  F E M    
Sbjct: 703 RAAIDLFRRMEDESIAPDHIAFVAVLYACS-----------HSGLMNEGRRFLESMKYEY 751

Query: 448 ------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
                 E Y  L+D+  ++  ++ A Q F K    +     W A++     +   E   +
Sbjct: 752 QLEPWPEHYVCLVDLLGRANHLEEAYQ-FVKGMEVEPTAEVWCALLGACQIHSNKELGEI 810

Query: 500 AFRQMLE 506
           A +++LE
Sbjct: 811 AAQKLLE 817


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 262/778 (33%), Positives = 430/778 (55%), Gaps = 51/778 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYSSVLKA 116
           A +LFD +   T   WN +I  +V N  P  ++ LY +M+ S  P  +C   T+  +LKA
Sbjct: 133 AEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDAC---TFPCILKA 189

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   ++ R G  VH   I+       FV NS++ MY+ C      ++ G +         
Sbjct: 190 CGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKC-----NDLNGAR--------- 235

Query: 177 DLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
               ++FD M  + +VV+WN+++S Y    + +EA+R F  M +  + P+T +FV    A
Sbjct: 236 ----QLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 291

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
                  K    ++  ++K  S Y  ++FVA++ I MYA  G    A  IF N  + +T 
Sbjct: 292 CEDSSFIKQGMFIHATVLK--SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI 349

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+M+ G+VQN    EA++ + ++ +  +   D V  +S ++A ++      G Q+HAY
Sbjct: 350 SWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP-DLVAVISIIAASARSGNTLHGMQIHAY 408

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            +KN +   + V N++++                    +DVVSW T+I+   QNG     
Sbjct: 409 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 468

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L  E+Q +G  +D + ++++L A S L+     K+ H+Y++R G+    +++ ++D+Y
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVY 528

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            + G +  A ++FE  +   +D  +W +MI+ Y  NGL  EA   F  M E  V P+ ++
Sbjct: 529 GECGNVDYAARMFELIEF--KDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSIS 586

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S+L A   +  ++ GK++HGF IR        + ++L+DMY++ G +  + NVF  I 
Sbjct: 587 LVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 646

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K+ V +T+MI  YG HG    A+ LFR M+   I PD I FVAVL ACS++GL++EG +
Sbjct: 647 NKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR 706

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             + M+ EY+++P  EHY C+ D+LGR   + EAY+FVK +  E    E+W +LLG+C++
Sbjct: 707 FLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTA-EVWCALLGACQI 765

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + EL E+ A+KLLEMD  N  PG +VL+SN+Y+ E  W++V+ VR  M+  GL+K  G
Sbjct: 766 HSNKELGEIAAQKLLEMDPEN--PGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPG 823

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
           CSWI+VG  V+ F ++D+ HPQS++IY  L ++  ++   G    Q   V    + +E
Sbjct: 824 CSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEE 881



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 215/754 (28%), Positives = 361/754 (47%), Gaps = 105/754 (13%)

Query: 12  PPPPTATPPPPQLPQIHSLSP------PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI 65
           P P       P L +IH   P      P+  ++TP++R    +IC+ G      + F S+
Sbjct: 11  PIPSFYLNCHPVLKKIHQNPPLKISKFPLKPVETPSLR----EICKRGS---VNEAFQSL 63

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
           T                        L  +Q    SP     +  YSSVL+ C   + L  
Sbjct: 64  TD-----------------------LFANQ----SPSQFSLDEAYSSVLELCGSKKALSE 96

Query: 126 GKAVHCHFIRCFSNP---SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           G+ VH H I   SN    S F+   L+ MY  C   +DAE                  K+
Sbjct: 97  GQQVHAHMIT--SNALFNSVFLSTRLVFMYGKCGCLVDAE------------------KL 136

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD M  + +  WN ++  YV     + ++  +R M   GI     +F  +  A   L D 
Sbjct: 137 FDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDR 196

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMI 301
           +    V+GL +K G  YV+ +FVA+S + MY +    + AR++FD   E+   V WN+MI
Sbjct: 197 RYGAEVHGLAIKEG--YVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMI 254

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             Y  N   +EA+ LF + ++   +  +  TF++AL A      +  G  +HA ++K+  
Sbjct: 255 SAYSSNGQSIEALRLFGE-MQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 313

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            + V V NA+I                    + D +SWN+M+S FVQNGL  E L   +E
Sbjct: 314 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 373

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           M+  G   D V V ++++A++   N   G Q HAY +++G+  +  + + L+DMYAK   
Sbjct: 374 MRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCS 433

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +K    IF+K    D+D  +W  +IAG+ QNG    A   FR++    +  +V+ I+S+L
Sbjct: 434 MKYMDCIFDKMP--DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSIL 491

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+ +  I   K++H + IR  L  ++ +   ++D+Y + G ++YAA +F  I  K+ V
Sbjct: 492 LACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV 550

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-L 639
           ++T+MI  Y  +G++  AL LF  MK  G+EPD+I+ V++LSA +    + +G +I   L
Sbjct: 551 SWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFL 610

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVG---KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           +++ + ++ S      + DM  R G   K    + F++        L +W S++ +  +H
Sbjct: 611 IRKGFVLEGSLAS--TLVDMYARCGTLEKSRNVFNFIRN-----KDLVLWTSMINAYGMH 663

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           G    A  + ++   M+  +  P +   ++ +YA
Sbjct: 664 GCGRAAIDLFRR---MEDESIAPDHIAFVAVLYA 694



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 219/487 (44%), Gaps = 69/487 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  +F ++    T+ WN+++ GFV N L +EA+  Y +M+ +      D     S
Sbjct: 331 GKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKP--DLVAVIS 388

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A A + N   G  +H + ++   +    V NSL++MY        A+   +KY++  
Sbjct: 389 IIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMY--------AKFCSMKYMDC- 439

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +FD M  ++VV+W TI++ + +   +  A+  FR +   GI    +   ++
Sbjct: 440 ---------IFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 490

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L    S   ++  +++ G   ++DL + +  + +Y E G  D+A ++F+    +
Sbjct: 491 LLACSGLKLISSVKEIHSYIIRKG---LSDLVLQNGIVDVYGECGNVDYAARMFELIEFK 547

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W +MI  YV N    EA+ELF  +++   +  D ++ +S LSA + L  L  G+++
Sbjct: 548 DVVSWTSMISCYVHNGLANEALELF-HLMKETGVEPDSISLVSILSAAASLSALKKGKEI 606

Query: 353 HAYII-KNFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H ++I K FV    +                   V N +  +D+V W +MI+A+  +G  
Sbjct: 607 HGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCG 666

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGM---- 447
              + L   M+ +    D +   A+L A S           H+ L+  G  F E M    
Sbjct: 667 RAAIDLFRRMEDESIAPDHIAFVAVLYACS-----------HSGLMNEGRRFLESMKYEY 715

Query: 448 ------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
                 E Y  L+D+  ++  ++ A Q F K    +     W A++     +   E   +
Sbjct: 716 QLEPWPEHYACLVDLLGRANHLEEAYQ-FVKGMEVEPTAEVWCALLGACQIHSNKELGEI 774

Query: 500 AFRQMLE 506
           A +++LE
Sbjct: 775 AAQKLLE 781


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/786 (32%), Positives = 428/786 (54%), Gaps = 76/786 (9%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
            D I   + V WN +I G+V      EA  ++ +M K       DN+T++S L+ C   R
Sbjct: 233 LDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG--VCPDNFTFASALRVCGALR 290

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           +   GK VH   I C      FV N+L++MY+ C    D E   LK              
Sbjct: 291 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC----DDEESCLK-------------- 332

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD M  RN V WN+I+S   +   + +A+  F  M   G + +  +  ++  A + L D
Sbjct: 333 VFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLAD 392

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++G LV+  +   +D+ + S+ + MY++ G  + A ++F + LERN   +N ++
Sbjct: 393 IGKGRELHGHLVR--NLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALL 450

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GYVQ     EA+EL+  +   D I  D  TF + L+  +  +  + G+Q+HA++I+  +
Sbjct: 451 AGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 510

Query: 362 ALPVIV--------------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              +IV                     N + ER+  SWN+MI  + QNG   E L L  +
Sbjct: 511 TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQ 570

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGL 460
           MQ  G   D  +++++LS+  +L +   G++ H +++R+ +  EG ++  L+DMYAK G 
Sbjct: 571 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 630

Query: 461 IKTARQIFEK----------------------NDSGD-------RDQATWNAMIAGYTQN 491
           +  A +++++                      ND+ +       R+ A WN+++AGY   
Sbjct: 631 MDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANK 690

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFV 550
           GL +E+F  F +MLE ++  +V+T+ +++  C+ +  +E G QLH   I+   ++ +V +
Sbjct: 691 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            T+L+DMYSK G I  A  VF  +  KN V++  MI GY +HG S+ AL L+  M   G+
Sbjct: 751 ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM 810

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P+ +TF+A+LSACS+ GLV+EGL+IF  MQ++Y I+   EHY C+ D+LGR G++ +A 
Sbjct: 811 YPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 870

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           EFV+++  E  V   WG+LLG+CR+H   ++  + A++L E+D +N  PG +V++SNIYA
Sbjct: 871 EFVEKMPIEPEV-STWGALLGACRVHKDMDMGRLAAQRLFELDPQN--PGPYVIMSNIYA 927

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
             G W+ V+ +R+ M+ +G++K+ G SWI++   +  F +  + HP++ +IY  L  L +
Sbjct: 928 AAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTL 987

Query: 791 EMRNAG 796
           + +  G
Sbjct: 988 QSKGLG 993



 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 177/705 (25%), Positives = 338/705 (47%), Gaps = 80/705 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ +       WNT+I+ +   +   E + LY +M+ S  ++  D +T+ SV+KAC
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS--DKFTFPSVIKAC 185

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               ++   + +    ++   N + FV  +L++ Y+                   +   D
Sbjct: 186 IAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYAR------------------FGWMD 227

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                 D +   +VV WN +++ YVK   + EA   F  ML++G+ P   +F +      
Sbjct: 228 DAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCG 287

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L        V+  L+  G  +  D FV ++ I MYA+    +   K+FD   ERN   W
Sbjct: 288 ALRSRDGGKQVHSKLIACG--FKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 345

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N++I    Q  H  +A+ LF+++ E      +     S L A + L ++  G++LH +++
Sbjct: 346 NSIISAEAQFGHFNDALVLFLRMQE-SGYKSNRFNLGSILMASAGLADIGKGRELHGHLV 404

Query: 358 KNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           +N +   +I                    V  +++ER+ VS+N +++ +VQ G  +E L 
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALE 464

Query: 398 LVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMY 455
           L ++MQ + G   D  T T LL+  +N RN + G+Q HA+L+R  I    + E+ L+ MY
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMY 524

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           ++ G +  A++IF  N   +R+  +WN+MI GY QNG  +EA   F+QM  + + P+  +
Sbjct: 525 SECGRLNYAKEIF--NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 582

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY--------- 566
           ++S+L +C  + + + G++LH F +R  +++   +   L+DMY+K G ++Y         
Sbjct: 583 LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTI 642

Query: 567 ----------------------AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
                                 A N+F ++ ++N+  + +++ GY   G+ + + + F  
Sbjct: 643 KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M    IE D +T V +++ CS    ++ G Q+  L+ ++  +  S      + DM  + G
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            + +A      +   G  +  W +++     HG S+ A ++ +++
Sbjct: 763 AITKARTVFDNM--NGKNIVSWNAMISGYSKHGCSKEALILYEEM 805



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 304/602 (50%), Gaps = 57/602 (9%)

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY--STCL 156
           + P +  +   YSS+++ C ++ + + GK++H   I    NP  ++   +L +Y  S CL
Sbjct: 63  TKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
             L             Y++     K+F+ M  RN+ AWNT++  Y + + Y+E +R +  
Sbjct: 123 DDLC------------YAR-----KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGR 165

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   G      +F +V  A  ++ D      +   +VK G     +LFV  + +  YA  
Sbjct: 166 MRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNC--NLFVGGALVDGYARF 223

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  D A    D     +   WN +I GYV+     EA  +F ++L++  +  D+ TF SA
Sbjct: 224 GWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIG-VCPDNFTFASA 282

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L     L+  D G+Q+H+ +I         V NA+I                    ER+ 
Sbjct: 283 LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 342

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+WN++ISA  Q G  ++ L+L   MQ+ G+  +   + ++L A++ L +   G++ H +
Sbjct: 343 VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGH 402

Query: 437 LLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           L+R+ ++ +  + S L+DMY+K G+++ A Q+F      +R++ ++NA++AGY Q G  E
Sbjct: 403 LVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRS--LLERNEVSYNALLAGYVQEGKAE 460

Query: 496 EAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EA   +  M  E  + P+  T  ++L  C    N   G+Q+H   IR  + +N+ V T L
Sbjct: 461 EALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETEL 520

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           + MYS+ G +NYA  +F ++ E+N+ ++ +MI GY Q+G ++ AL LF+ M+  GI+PD 
Sbjct: 521 VHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDC 580

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
            +  ++LS+C       +G ++ +      M++E  +Q        + DM  + G +  A
Sbjct: 581 FSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ------VVLVDMYAKCGSMDYA 634

Query: 670 YE 671
           ++
Sbjct: 635 WK 636



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 202/460 (43%), Gaps = 33/460 (7%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           Q  QIH+        K   + + L  +  E GR + A+++F+ +       WN++I G+ 
Sbjct: 497 QGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQ 556

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            N    EA+ L+ QM+ +     C  ++ SS+L +C    + + G+ +H   +R      
Sbjct: 557 QNGETQEALRLFKQMQLNGIKPDC--FSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE 614

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVE-------------VDYSKYDLVCKVFDTMRR 188
             +   L++MY+ C S   A  V  + ++             V+  + +    +FD M +
Sbjct: 615 GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQ 674

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           RN   WN+I++ Y       E+   F  ML   I    ++ V +    SSL   +  D +
Sbjct: 675 RNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQL 734

Query: 249 YGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           + L++K G  +VN   V  +A+  MY++ G    AR +FDN   +N   WN MI GY ++
Sbjct: 735 HSLIIKKG--FVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 792

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               EA+ L+ ++ +   +  ++VTFL+ LSA S    ++ G ++   + +++       
Sbjct: 793 GCSKEALILYEEMPK-KGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDY------- 844

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
               IE     +  M+    + G  ++    V +M  +    +  T  ALL A    ++ 
Sbjct: 845 ---NIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEP---EVSTWGALLGACRVHKDM 898

Query: 428 DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           D+G+     L        G    + ++YA +G  K    I
Sbjct: 899 DMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDI 938


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/760 (34%), Positives = 419/760 (55%), Gaps = 50/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+Q+FD +       WN ++ G+V + L  EA  L+ QM + S     D  T+ S+L AC
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS--VKPDKRTFVSMLNAC 221

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ RN+  G+ ++   ++   +   FV  +L+NM+  C    DA                
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA---------------- 265

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD +  R++V W ++++   +  R+ +A   F+ M   G++P  ++FV++  A +
Sbjct: 266 --TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACN 323

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                +    V+  + ++G  +  +++V ++ + MY + G  + A ++FD    RN   W
Sbjct: 324 HPEALEQGKKVHARMKEVG--WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MI G+ Q+    EA   F +++E   I  + VTF+S L A S    L  GQQ+  +II
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440

Query: 358 K------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           +      + V   ++              V   + +++VV+WN MI+A+VQ+   D  L 
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               + K+G   +S T T++L+   +  + ++GK  H  +++ G+  +  + + L+ M+ 
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
             G + +A+ +F  ND   RD  +WN +IAG+ Q+G  + AF  F+ M E  + P+ +T 
Sbjct: 561 NCGDLMSAKNLF--NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             +L AC     +  G++LH        D +V VGT LI MY+K G I  A  VF K+P+
Sbjct: 619 TGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN  ++T+MI GY QHG  + AL LF  M+  G++PD ITFV  LSAC++AGL++EGL  
Sbjct: 679 KNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHH 738

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M +E+ I+P  EHY C+ D+ GR G + EA EF+ ++  E +   +WG+LLG+C++H
Sbjct: 739 FQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS-RVWGALLGACQVH 796

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + ELAE  A+K LE+D  ++  G  V+LSNIYA  G W+ V K+RK M +RG+ K+ G 
Sbjct: 797 LNVELAEKAAQKKLELDPNDN--GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V G V+ F S D+ HPQ+ +I+  LERL MEMR  G
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894



 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 313/615 (50%), Gaps = 47/615 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYS++L+ C + +NL  G+ ++ H  +    P  F++N+L+NMY+ C +++ A+      
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAK------ 165

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       ++FD MR ++V +WN ++  YV+   Y EA +    M++  ++P   +
Sbjct: 166 ------------QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRT 213

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           FV++  A +   +      +Y L++K G  +  DLFV ++ I M+ + G    A K+FDN
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAG--WDTDLFVGTALINMHIKCGDIGDATKVFDN 271

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   W +MI G  ++    +A  LF Q +E + +  D V F+S L A +  + L+ 
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLF-QRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 349 GQQLHA------YIIKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           G+++HA      +  + +V   ++              V + V  R+VVSW  MI+ F Q
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-M 447
           +G  DE  +   +M + G   + VT  ++L A S+      G+Q   +++  G   +  +
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ MYAK G +K A ++FEK     ++   WNAMI  Y Q+   + A   F+ +L+ 
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEK--ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + PN  T  S+L  C    ++ELGK +H   ++  L+ ++ V  +L+ M+   G +  A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
            N+F  +P+++ V++ T+I G+ QHG ++ A   F+ M+  GI+PD ITF  +L+AC+  
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
             + EG ++  L+  E            +  M  + G + +A++   +L ++ NV   W 
Sbjct: 629 EALTEGRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK-NVYS-WT 685

Query: 688 SLLGSCRLHGHSELA 702
           S++     HG  + A
Sbjct: 686 SMITGYAQHGRGKEA 700



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 239/503 (47%), Gaps = 67/503 (13%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G    A ++FD +     V W  +I GF  +    EA L +++M +S      
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG--IEP 411

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +  T+ S+L AC+    L+ G+ +  H I         V  +LL+MY+ C S  DA    
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH--- 468

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF+ + ++NVVAWN +++ YV+ E+Y  A+  F+ +L+ GI+P+
Sbjct: 469 ---------------RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPN 513

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           + +F ++     S    +    V+ L++K G E  +DL V+++ + M+   G    A+ +
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE--SDLHVSNALVSMFVNCGDLMSAKNL 571

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  +R+   WNT+I G+VQ+     A + F ++++   I  D +TF   L+A +  + 
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF-KMMQESGIKPDKITFTGLLNACASPEA 630

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           L  G++LHA I +      V+V   +I                    +++V SW +MI+ 
Sbjct: 631 LTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITG 690

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HF 444
           + Q+G   E L L Y+MQ++G   D +T    LSA +           HA L+  G+ HF
Sbjct: 691 YAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA-----------HAGLIEEGLHHF 739

Query: 445 EGMESY-----------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + M+ +           ++D++ ++GL+  A +   K    + D   W A++     +  
Sbjct: 740 QSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV-EPDSRVWGALLGACQVHLN 798

Query: 494 LEEAFVAFRQMLEHNVTPNVVTI 516
           +E A  A ++ LE +   N V +
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFV 821



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D    NA++   ++ G   EA     ++   ++     T +++L  C    N+  G+++
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           +    +  +  ++F+  +LI+MY+K G    A  +F  + EK+  ++  ++ GY QHG+ 
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           E A  L   M    ++PD  TFV++L+AC+ A  VD+G ++++L+    K    T+ +  
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI---LKAGWDTDLFVG 249

Query: 656 VA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            A  +M  + G + +A +    L      L  W S++     HG  + A  + +++ E  
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRD--LVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            +     +  LL      E   E   KV   M+E G   E+
Sbjct: 308 VQPDKVAFVSLLRACNHPEA-LEQGKKVHARMKEVGWDTEI 347


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 272/803 (33%), Positives = 431/803 (53%), Gaps = 54/803 (6%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSIT 66
           +PL     T+T     L Q+H+        + P   ++L     Q G    ++++FD+  
Sbjct: 5   MPLFRRCATSTT----LTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           +P + +W  +I  +V      EA+ LY +M      T   N+ + SVLKAC+   +L +G
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ-TQISNFVFPSVLKACSGFGDLSVG 119

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
             VH   I+C       V  SLL MY         EM  L          D  CK FDTM
Sbjct: 120 GKVHGRVIKCGFESDAVVETSLLCMY--------GEMSCL----------DDACKAFDTM 161

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
             R+VVAW++IV  +V+  +  E +  F  M+   + P +++ ++V  A S LG  +   
Sbjct: 162 PIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGR 221

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            V+G +V+   E  ++  + +S I MY +LG    A ++F+N   R T  W  MI  Y Q
Sbjct: 222 SVHGYVVR--REIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-------N 359
           +    EA+ +F ++ E  ++  + VT +  L A ++L  +  G+ +H ++I+       +
Sbjct: 280 SGCFQEALNVFAKMQEF-KMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELD 338

Query: 360 FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           F+   ++              V   + E+ ++SWNT+IS F +NG  +E L+L  +MQ Q
Sbjct: 339 FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQ 398

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
           G M DS ++ + LSA   +    +G Q H Y+++ G   + +++ LIDMYAK G + +A 
Sbjct: 399 GLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSAN 458

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++FEK    ++   TWN+MI G++QNG   EA   F QM  + V  + +T  SV+ AC+ 
Sbjct: 459 KMFEKIK--EKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSH 516

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +G +E GK +H   I Y L ++ ++ T+L DMYSK G +  A  VF ++ E++ V+++ M
Sbjct: 517 LGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVM 576

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GYG HG     +SLF  M G GI+P+ ITF+ +LSACS+AG V+EG   F+ M  E+ 
Sbjct: 577 IAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFG 635

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           ++P  +H+ C+ D+L R G +  AY+ +  L    N   IWG+LL  CR+H   ++ + +
Sbjct: 636 VEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS-SIWGALLNGCRIHKRIDIIKSI 694

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
            K LL++DT ++  GY+ LLSNIYAEEG W+   KVR  M+ +GLRK  G S I++   +
Sbjct: 695 EKNLLDVDTADT--GYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKI 752

Query: 766 NRFASKDQEHPQSHKIYEMLERL 788
            RF   D  H Q+  IY  LE  
Sbjct: 753 YRFGPGDTSHSQTKDIYRFLENF 775


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 259/760 (34%), Positives = 419/760 (55%), Gaps = 50/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+Q+FD +       WN ++ G+V + L  EA  L+ QM + S     D  T+ S+L AC
Sbjct: 164 AKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDS--VKPDKRTFVSMLNAC 221

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ RN+  G+ ++   ++   +   FV  +L+NM+  C    DA                
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA---------------- 265

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD +  R++V W ++++   +  R+ +A   F+ M   G++P  ++FV++  A +
Sbjct: 266 --TKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACN 323

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                +    V+  + ++G  +  +++V ++ + MY + G  + A ++FD    RN   W
Sbjct: 324 HPEALEQGKKVHARMKEVG--WDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MI G+ Q+    EA   F +++E   I  + VTF+S L A S    L  GQQ+  +II
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIE-SGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440

Query: 358 K------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           +      + V   ++              V   + +++VV+WN MI+A+VQ+   D  L 
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               + K+G   +S T T++L+   +  + ++GK  H  +++ G+  +  + + L+ M+ 
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
             G + +A+ +F  ND   RD  +WN +IAG+ Q+G  + AF  F+ M E  + P+ +T 
Sbjct: 561 NCGDLMSAKNLF--NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             +L AC     +  G++LH        D +V VGT LI MY+K G I  A  VF K+P+
Sbjct: 619 TGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN  ++T+MI GY QHG  + AL LF  M+  G++PD ITFV  LSAC++AGL++EGL  
Sbjct: 679 KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHH 738

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M +E+ I+P  EHY C+ D+ GR G + EA EF+ ++  E +   +WG+LLG+C++H
Sbjct: 739 FQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDS-RVWGALLGACQVH 796

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + ELAE  A+K LE+D  ++  G  V+LSNIYA  G W+ V K+RK M +RG+ K+ G 
Sbjct: 797 LNVELAEKAAQKKLELDPNDN--GVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQ 854

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V G V+ F S D+ HPQ+ +I+  LERL MEMR  G
Sbjct: 855 SWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894



 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 172/615 (27%), Positives = 312/615 (50%), Gaps = 47/615 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYS++L+ C + +NL  G+ ++ H  +    P  F+ N+L+NMY+ C +++ A+      
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAK------ 165

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       ++FD MR ++V +WN ++  YV+   Y EA +    M++  ++P   +
Sbjct: 166 ------------QIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRT 213

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           FV++  A +   +      +Y L++K G  +  DLFV ++ I M+ + G    A K+FDN
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAG--WDTDLFVGTALINMHIKCGDIGDATKVFDN 271

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   W +MI G  ++    +A  LF Q +E + +  D V F+S L A +  + L+ 
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLF-QRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330

Query: 349 GQQLHA------YIIKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           G+++HA      +  + +V   ++              V + V  R+VVSW  MI+ F Q
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-M 447
           +G  DE  +   +M + G   + VT  ++L A S+      G+Q   +++  G   +  +
Sbjct: 391 HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRV 450

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ MYAK G +K A ++FEK     ++   WNAMI  Y Q+   + A   F+ +L+ 
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEK--ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + PN  T  S+L  C    ++ELGK +H   ++  L+ ++ V  +L+ M+   G +  A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
            N+F  +P+++ V++ T+I G+ QHG ++ A   F+ M+  GI+PD ITF  +L+AC+  
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
             + EG ++  L+  E            +  M  + G + +A++   +L ++ NV   W 
Sbjct: 629 EALTEGRRLHALI-TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK-NVYS-WT 685

Query: 688 SLLGSCRLHGHSELA 702
           S++     HG  + A
Sbjct: 686 SMIAGYAQHGRGKEA 700



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 239/503 (47%), Gaps = 67/503 (13%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G    A ++FD +     V W  +I GF  +    EA L +++M +S      
Sbjct: 354 LSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG--IEP 411

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +  T+ S+L AC+    L+ G+ +  H I         V  +LL+MY+ C S  DA    
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH--- 468

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF+ + ++NVVAWN +++ YV+ E+Y  A+  F+ +L+ GI+P+
Sbjct: 469 ---------------RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPN 513

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           + +F ++     S    +    V+ L++K G E  +DL V+++ + M+   G    A+ +
Sbjct: 514 SSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE--SDLHVSNALVSMFVNCGDLMSAKNL 571

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  +R+   WNT+I G+VQ+     A + F ++++   I  D +TF   L+A +  + 
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYF-KMMQESGIKPDKITFTGLLNACASPEA 630

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           L  G++LHA I +      V+V   +I                    +++V SW +MI+ 
Sbjct: 631 LTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAG 690

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HF 444
           + Q+G   E L L Y+MQ++G   D +T    LSA +           HA L+  G+ HF
Sbjct: 691 YAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA-----------HAGLIEEGLHHF 739

Query: 445 EGMESY-----------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + M+ +           ++D++ ++GL+  A +   K    + D   W A++     +  
Sbjct: 740 QSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQV-EPDSRVWGALLGACQVHLN 798

Query: 494 LEEAFVAFRQMLEHNVTPNVVTI 516
           +E A  A ++ LE +   N V +
Sbjct: 799 VELAEKAAQKKLELDPNDNGVFV 821



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D    NA++   ++ G   EA     ++   ++     T +++L  C    N+  G+++
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           +    +  +  ++F+  +LI+MY+K G    A  +F  + EK+  ++  ++ GY QHG+ 
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           E A  L   M    ++PD  TFV++L+AC+ A  VD+G ++++L+    K    T+ +  
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI---LKAGWDTDLFVG 249

Query: 656 VA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            A  +M  + G + +A +    L      L  W S++     HG  + A  + +++ E  
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRD--LVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            +     +  LL      E   E   KV   M+E G   E+
Sbjct: 308 VQPDKVAFVSLLRACNHPEA-LEQGKKVHARMKEVGWDTEI 347


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/799 (33%), Positives = 421/799 (52%), Gaps = 52/799 (6%)

Query: 26  QIHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           ++H+L     KL+   + S   ++     G P  +R +FD+       ++N ++ G+  N
Sbjct: 113 KVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRN 172

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
            L  +AI L+ ++  ++     DN+T   V KACA   ++ +G+AVH   ++       F
Sbjct: 173 ALFRDAISLFLELLSATDLAP-DNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAF 231

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           V N+L+ MY  C            +VE          KVF+TMR RN+V+WN+++    +
Sbjct: 232 VGNALIAMYGKC-----------GFVES-------AVKVFETMRNRNLVSWNSVMYACSE 273

Query: 204 TERYVEAVRQFRMML---RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
              + E    F+ +L     G+ P   + V V PA +++G+ +   VV+GL  KLG    
Sbjct: 274 NGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLG--IT 331

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            ++ V +S + MY++ G    AR +FD    +N   WNT+I GY +        EL  ++
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEM 391

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
              +++  ++VT L+ L A S   +L   +++H Y  ++      +V NA +        
Sbjct: 392 QREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSS 451

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        + V SWN +I A  QNG   + L L   M   G   D  T+ +LL A
Sbjct: 452 LDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLA 511

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            + L+    GK+ H ++LR+G+   E +   L+ +Y +   +   + IF+K +  ++   
Sbjct: 512 CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKME--NKSLV 569

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            WN MI G++QN L  EA   FRQML   + P  + +  VL AC+ +  + LGK++H F+
Sbjct: 570 CWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFA 629

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           ++  L ++ FV  +LIDMY+K G +  + N+F ++ EK+   +  +I GYG HG   +A+
Sbjct: 630 LKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAI 689

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            LF  M+  G  PD+ TF+ VL AC++AGLV EGL+    MQ  Y ++P  EHY CV DM
Sbjct: 690 ELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDM 749

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           LGR G++ EA + V E+ +E +   IW SLL SCR +G  E+ E V+KKLLE++  N   
Sbjct: 750 LGRAGQLTEALKLVNEMPDEPDS-GIWSSLLSSCRNYGDLEIGEEVSKKLLELEP-NKAE 807

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
            Y VLLSN+YA  G W+ V KVR+ M+E GL K+ GCSWI++GG V RF   D    +S 
Sbjct: 808 NY-VLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESK 866

Query: 780 KIYEMLERLAMEMRNAGNK 798
           KI +   +L  ++   G K
Sbjct: 867 KIQQTWIKLEKKISKIGYK 885



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 176/730 (24%), Positives = 316/730 (43%), Gaps = 103/730 (14%)

Query: 14  PPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIW 73
           PP   P         + SP         I  RL  +C  G  + A  L  S  +  TV  
Sbjct: 37  PPFTVPKSSLTSHTKTHSP---------ILQRLHNLCDSGNLNDALNLLHSHAQNGTV-- 85

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC-- 131
                    +++  EAI +                    +L+AC   +N+ +G+ VH   
Sbjct: 86  -------SSSDISKEAIGI--------------------LLRACGHHKNIHVGRKVHALV 118

Query: 132 ---HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
              H +R        +   ++ MYS C S  D+                    VFD  + 
Sbjct: 119 SASHKLR----NDVVLSTRIIAMYSACGSPSDSR------------------GVFDAAKE 156

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADV 247
           +++  +N ++S Y +   + +A+  F  +L    + P   +   V  A + + D +  + 
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+ L +K G    +D FV ++ I MY + G  + A K+F+    RN   WN+++    +N
Sbjct: 217 VHALALKAGG--FSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274

Query: 308 NHPVEAIELFVQVL--ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
               E   +F ++L  E + +V D  T ++ + A + + E+ +G  +H    K  +   V
Sbjct: 275 GGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEV 334

Query: 366 IVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM-LVYEMQK 404
            V N++++                    ++VVSWNT+I  + + G D  G+  L+ EMQ+
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEG-DFRGVFELLQEMQR 393

Query: 405 -QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIK 462
            +   ++ VTV  +L A S        K+ H Y  RHG +  E + +  +  YAK   + 
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A ++F   +   +  ++WNA+I  + QNG   ++   F  M++  + P+  TI S+L A
Sbjct: 454 CAERVFCGMEG--KTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLA 511

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +  +  GK++HGF +R  L+ + F+G SL+ +Y +   +     +F K+  K+ V +
Sbjct: 512 CARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCW 571

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             MI G+ Q+ +   AL  FR M   GI+P  I    VL ACS    +  G ++     +
Sbjct: 572 NVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALK 631

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS--- 699
            + +       C + DM  + G + ++      + E+     +W  ++    +HGH    
Sbjct: 632 AH-LSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA--VWNVIIAGYGIHGHGLKA 688

Query: 700 -ELAEVVAKK 708
            EL E++  K
Sbjct: 689 IELFELMQNK 698


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/833 (32%), Positives = 446/833 (53%), Gaps = 77/833 (9%)

Query: 5   SVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDS 64
           S PL      P+  P P QL        P     TPT  +        G P     +F S
Sbjct: 2   SCPLAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAP----SIFIS 57

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
            +R +   W  ++   V +NL  EA+L Y  M         DNY + ++LKA A+ +++ 
Sbjct: 58  QSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDME 114

Query: 125 IGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           +GK +H H  +  +   S  V N+L+N+Y  C                    +  V KVF
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC------------------GDFGAVYKVF 156

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL---- 239
           D +  RN V+WN+++S     E++  A+  FR ML   + PS+ + V+V  A S+L    
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216

Query: 240 GDYKSADV-VYGLLV-KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           G      V  YGL   +L S      F+ ++ + MY +LG    ++ +  +   R+   W
Sbjct: 217 GLMMGKQVHAYGLRKGELNS------FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++    QN   +EA+E +++ + L+ +  D+ T  S L A S L+ L  G++LHAY +
Sbjct: 271 NTVLSSLCQNEQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 358 KN-------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           KN       FV   ++              V + + +R +  WN MI+ + QN  D E L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389

Query: 397 MLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           +L   M++  G + +S T+  ++ A          +  H ++++ G+  +  +++ L+DM
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVT-- 510
           Y++ G I  A +IF K +  DRD  TWN MI GY  +   E+A +   +M  LE  V+  
Sbjct: 450 YSRLGKIDIAMRIFGKME--DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507

Query: 511 -------PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
                  PN +T+ ++LP+C  +  +  GK++H ++I+  L  +V VG++L+DMY+K G 
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  +  VF +IP+KN +T+  +I+ YG HG  + A+ L R M   G++P+ +TF++V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS++G+VDEGL+IF +M+ +Y ++PS++HY CV D+LGR G++ EAY+ +  +  + N  
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
             W SLLG+ R+H + E+ E+ A+ L++++   ++  ++VLL+NIY+  G W+   +VR+
Sbjct: 688 GAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M+E+G+RKE GCSWI+ G  V++F + D  HPQS K+   LE L   MR  G
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/833 (32%), Positives = 446/833 (53%), Gaps = 77/833 (9%)

Query: 5   SVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDS 64
           S PL      P+  P P QL        P     TPT  +        G P     +F S
Sbjct: 2   SCPLAFTFSLPSIFPLPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAP----SIFIS 57

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
            +R +   W  ++   V +NL  EA+L Y  M         DNY + ++LKA A+ +++ 
Sbjct: 58  QSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDME 114

Query: 125 IGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           +GK +H H  +  +   S  V N+L+N+Y  C                    +  V KVF
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC------------------GDFGAVYKVF 156

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL---- 239
           D +  RN V+WN+++S     E++  A+  FR ML   + PS+ + V+V  A S+L    
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216

Query: 240 GDYKSADV-VYGLLV-KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           G      V  YGL   +L S      F+ ++ + MY +LG    ++ +  +   R+   W
Sbjct: 217 GLMMGKQVHAYGLRKGELNS------FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++    QN   +EA+E +++ + L+ +  D+ T  S L A S L+ L  G++LHAY +
Sbjct: 271 NTVLSSLCQNEQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329

Query: 358 KN-------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           KN       FV   ++              V + + +R +  WN MI+ + QN  D E L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389

Query: 397 MLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           +L   M++  G + +S T+  ++ A          +  H ++++ G+  +  +++ L+DM
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVT-- 510
           Y++ G I  A +IF K +  DRD  TWN MI GY  +   E+A +   +M  LE  V+  
Sbjct: 450 YSRLGKIDIAMRIFGKME--DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507

Query: 511 -------PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
                  PN +T+ ++LP+C  +  +  GK++H ++I+  L  +V VG++L+DMY+K G 
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  +  VF +IP+KN +T+  +I+ YG HG  + A+ L R M   G++P+ +TF++V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS++G+VDEGL+IF +M+ +Y ++PS++HY CV D+LGR G++ EAY+ +  +  + N  
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
             W SLLG+ R+H + E+ E+ A+ L++++   ++  ++VLL+NIY+  G W+   +VR+
Sbjct: 688 GAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M+E+G+RKE GCSWI+ G  V++F + D  HPQS K+   LE L   MR  G
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 270/793 (34%), Positives = 427/793 (53%), Gaps = 50/793 (6%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPH-LARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+          P+IR+ L  +  + R    AR+L D  + P  V W+ +I G+  N 
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L   A++ + +M        C+ +T+SSVLKAC+  ++LRIGK VH   +        FV
Sbjct: 137 LGGGALMAFHEMHLLG--VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MY+ C   LD++                  ++FD +  RNVV+WN + S YV+ 
Sbjct: 195 ANTLVVMYAKCDEFLDSK------------------RLFDEIPERNVVSWNALFSCYVQI 236

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           +   EAV  F  M+  GI+P+  S  ++  A + L D     +++G L+KLG ++  D F
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW--DPF 294

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
            A++ + MYA++G    A  +F+   + +   WN +I G V + H  +A+EL  Q ++  
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ-MKRS 353

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------------ 366
            I  +  T  SAL A + +   +LG+QLH+ ++K       FV++ ++            
Sbjct: 354 GICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDA 413

Query: 367 --VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
               N + E+D+++WN +IS + Q   D E L L  EM K+G   +  T++ +L + + L
Sbjct: 414 RMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGL 473

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           +   V +Q H   ++ G H +  + + LID Y K   ++ A +IFE+   GD    ++ +
Sbjct: 474 QVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL--VSFTS 531

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MI  Y Q G  EEA   F +M +  + P+    +S+L AC  +   E GKQLH   ++Y 
Sbjct: 532 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              ++F G SL++MY+K G I+ A   F+++ E+  V+++ MI G  QHG   +AL LF 
Sbjct: 592 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFN 651

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G+ P+ IT V+VL AC++AGLV E    F+ M++ +  +P  EHY C+ D+LGR 
Sbjct: 652 QMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRA 711

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           GK+ EA E V ++  E N   +WG+LLG+ R+H   EL    A+ L  ++   S  G HV
Sbjct: 712 GKINEAVELVNKMPFEANA-SVWGALLGAARIHKDVELGRRAAEMLFILEPEKS--GTHV 768

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LL+NIYA  G WENV +VR+ MR+  ++KE G SWI+V   V  F   D+ H +S +IY 
Sbjct: 769 LLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYA 828

Query: 784 MLERLAMEMRNAG 796
            L+ L+  M  AG
Sbjct: 829 KLDELSDLMDKAG 841



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/625 (25%), Positives = 311/625 (49%), Gaps = 49/625 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +YS +L  C  T++LR G  +H H  +   +    + N L+N+YS C             
Sbjct: 58  SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC------------- 104

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                  +    K+ D     ++V+W+ ++S Y +      A+  F  M  +G++ +  +
Sbjct: 105 -----RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A S + D +    V+G++V  G E   D+FVA++ + MYA+   F  ++++FD 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFE--GDVFVANTLVVMYAKCDEFLDSKRLFDE 217

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERN   WN +   YVQ +   EA+ LF +++ L  I  ++ +  S ++A + L++   
Sbjct: 218 IPERNVVSWNALFSCYVQIDFCGEAVGLFYEMV-LSGIKPNEFSLSSMVNACTGLRDSSR 276

Query: 349 GQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           G+ +H Y+IK                      +A  + V   + + D+VSWN +I+  V 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +   ++ L L+ +M++ G   +  T+++ L A + +  +++G+Q H+ L++  +  +   
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396

Query: 449 SY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           S  L+DMY+K  L++ AR  F  N   ++D   WNA+I+GY+Q     EA   F +M + 
Sbjct: 397 SVGLVDMYSKCDLLEDARMAF--NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE 454

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            +  N  T++++L +   +  + + +Q+HG S++     +++V  SLID Y K   +  A
Sbjct: 455 GIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 514

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F +    + V++T+MI  Y Q+G  E AL LF  M+   ++PD     ++L+AC+  
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 574

Query: 628 GLVDEGLQI-FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
              ++G Q+   +++  + +     +   + +M  + G + +A     EL E G V   W
Sbjct: 575 SAFEQGKQLHVHILKYGFVLDIFAGN--SLVNMYAKCGSIDDAGRAFSELTERGIV--SW 630

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLE 711
            +++G    HGH   A  +  ++L+
Sbjct: 631 SAMIGGLAQHGHGRQALQLFNQMLK 655



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 169/325 (52%), Gaps = 12/325 (3%)

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    Q   D +   ++  + K  F   SV+ + LLS     ++   G Q HA++ + G
Sbjct: 27  LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  +  + ++LI++Y+K      AR++   ++S + D  +W+A+I+GY QNGL   A +A
Sbjct: 87  LSDDPSIRNHLINLYSKCRNFGYARKLV--DESSEPDLVSWSALISGYAQNGLGGGALMA 144

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M    V  N  T +SVL AC+ + ++ +GKQ+HG  +    + +VFV  +L+ MY+K
Sbjct: 145 FHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAK 204

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
                 +  +F +IPE+N V++  +   Y Q      A+ LF  M   GI+P+  +  ++
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264

Query: 621 LSACSYAGLVD--EGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           ++AC+  GL D   G  I   L++  Y   P + +   + DM  +VG + +A    +++ 
Sbjct: 265 VNACT--GLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK 320

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELA 702
           +   V   W +++  C LH H E A
Sbjct: 321 QPDIV--SWNAVIAGCVLHEHHEQA 343


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/760 (32%), Positives = 414/760 (54%), Gaps = 49/760 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A+Q  ++      V++N +I     +    EA   Y QM+  S     +  TY SVL AC
Sbjct: 338  AKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR--SDGVVMNRTTYLSVLNAC 395

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            + ++ L  G+ +H H      +    + NSL++MY+ C     A                
Sbjct: 396  STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR--------------- 440

Query: 178  LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               ++F+TM +R++++WN I++ Y + E   EA++ ++ M   G++P  ++F+++  A +
Sbjct: 441  ---ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT 497

Query: 238  SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   Y    +++  +++ G +  ++  +A++ + MY   G    A+ +F+    R+   W
Sbjct: 498  NSSAYSDGKMIHEDILRSGIK--SNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISW 555

Query: 298  NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            N+MI G+ Q+     A +LF++ ++ + +  D +TF S L      + L+LG+Q+H  II
Sbjct: 556  NSMIAGHAQHGSYEAAYKLFLE-MKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLII 614

Query: 358  KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            ++ + L V + NA+I                     R+V+SW  MI  F   G D +   
Sbjct: 615  ESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFE 674

Query: 398  LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
            L ++MQ  GF     T +++L A  +    D GK+  A++L  G   + G+ + LI  Y+
Sbjct: 675  LFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYS 734

Query: 457  KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            KSG +  AR++F+K    +RD  +WN MIAGY QNGL   A     QM E  V  N  + 
Sbjct: 735  KSGSMTDARKVFDKMP--NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSF 792

Query: 517  ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             S+L AC+    +E GK++H   ++  +  +V VG +LI MY+K G +  A  VF    E
Sbjct: 793  VSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTE 852

Query: 577  KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            KN VT+  MI  Y QHG++ +AL  F  M   GI+PD  TF ++LSAC+++GLV EG +I
Sbjct: 853  KNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRI 912

Query: 637  FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
            F  ++ ++ + P+ EHY C+  +LGR G+  EA   + ++    +   +W +LLG+CR+H
Sbjct: 913  FSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDA-AVWETLLGACRIH 971

Query: 697  GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            G+  LAE  A   L+++ RN  P  +VLLSN+YA  G W++V K+R+ M  RG+RKE G 
Sbjct: 972  GNVALAEHAANNALKLNARN--PAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGR 1029

Query: 757  SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SWI+V   ++ F + D+ HP++ +IYE L+RL++EM  AG
Sbjct: 1030 SWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAG 1069



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 174/601 (28%), Positives = 288/601 (47%), Gaps = 46/601 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F  + R   + WN++I  +       +A  L+ +M+ +    S    TY S+L AC
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS--KITYISILTAC 193

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H   I         V NSLLNMY  C     A                
Sbjct: 194 CSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSAR--------------- 238

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  + RR+VV++NT++  Y +     E +  F  M   GI P  ++++N+  A +
Sbjct: 239 ---QVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFT 295

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +         ++ L V  G    +D+ V ++   M+   G    A++  +   +R+  V+
Sbjct: 296 TPSMLDEGKRIHKLAVNEGLN--SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVY 353

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I    Q+ H  EA E + Q +  D +V +  T+LS L+A S  + L  G+ +H++I 
Sbjct: 354 NALIAALAQHGHYEEAFEQYYQ-MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +   +  V + N++I                    +RD++SWN +I+ + +     E + 
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
           L  +MQ +G     VT   LLSA +N      GK  H  +LR GI   G + + L++MY 
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G I  A+ +FE   +  RD  +WN+MIAG+ Q+G  E A+  F +M +  + P+ +T 
Sbjct: 533 RCGSIMEAQNVFEGTRA--RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITF 590

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL  C     +ELG+Q+H   I   L  +V +G +LI+MY + G +  A  VF  +  
Sbjct: 591 ASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRH 650

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N +++T MI G+   G   +A  LF  M+  G +P   TF ++L AC  +  +DEG ++
Sbjct: 651 RNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKV 710

Query: 637 F 637
            
Sbjct: 711 I 711



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 178/611 (29%), Positives = 288/611 (47%), Gaps = 49/611 (8%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           T  +   Y  +++ C   R+L   K +H   +     P  F+ N L+NMY  C S  DA 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
            V LK                  M RR+V++WN+++S Y +     +A + F  M   G 
Sbjct: 138 QVFLK------------------MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGF 179

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            PS I+++++  A  S  + +    ++  +++ G  Y  D  V +S + MY +      A
Sbjct: 180 IPSKITYISILTACCSPAELEYGKKIHSKIIEAG--YQRDPRVQNSLLNMYGKCEDLPSA 237

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++F     R+   +NTM+G Y Q  +  E I LF Q +  + I  D VT+++ L A + 
Sbjct: 238 RQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQ-MSSEGIPPDKVTYINLLDAFTT 296

Query: 343 LQELDLGQQLHAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTM 382
              LD G+++H   +                       VA     L A  +RDVV +N +
Sbjct: 297 PSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNAL 356

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+A  Q+G  +E     Y+M+  G +++  T  ++L+A S  +    G+  H+++   G 
Sbjct: 357 IAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG- 415

Query: 443 HFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           H   ++  + LI MYA+ G +  AR++F  N    RD  +WNA+IAGY +     EA   
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELF--NTMPKRDLISWNAIIAGYARREDRGEAMKL 473

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           ++QM    V P  VT   +L AC        GK +H   +R  +  N  +  +L++MY +
Sbjct: 474 YKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRR 533

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G I  A NVF     ++ +++ +MI G+ QHG  E A  LF  MK  G+EPD ITF +V
Sbjct: 534 CGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASV 593

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L  C     ++ G QI  L+  E  +Q        + +M  R G + +AYE    L    
Sbjct: 594 LVGCKNPEALELGRQIHMLI-IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSL-RHR 651

Query: 681 NVLEIWGSLLG 691
           NV+  W +++G
Sbjct: 652 NVMS-WTAMIG 661



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 226/481 (46%), Gaps = 34/481 (7%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+F+++  I MY +      A ++F     R+   WN++I  Y Q     +A +LF + +
Sbjct: 116 DIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEE-M 174

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI-------------- 366
           +    +   +T++S L+A     EL+ G+++H+ II+  +   P +              
Sbjct: 175 QTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDL 234

Query: 367 -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                V + +  RDVVS+NTM+  + Q    +E + L  +M  +G   D VT   LL A 
Sbjct: 235 PSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAF 294

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +     D GK+ H   +  G++ +  + + L  M+ + G +  A+Q  E     DRD   
Sbjct: 295 TTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEA--FADRDVVV 352

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           +NA+IA   Q+G  EEAF  + QM    V  N  T  SVL AC+    +  G+ +H    
Sbjct: 353 YNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS 412

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
                 +V +G SLI MY++ G +  A  +F  +P+++ +++  +I GY +      A+ 
Sbjct: 413 EVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMK 472

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYC-CVAD 658
           L++ M+  G++P  +TF+ +LSAC+ +    +G  I  D+++   K   S  H    + +
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIK---SNGHLANALMN 529

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           M  R G ++EA    +  G     +  W S++     HG  E A    K  LEM      
Sbjct: 530 MYRRCGSIMEAQNVFE--GTRARDIISWNSMIAGHAQHGSYEAA---YKLFLEMKKEGLE 584

Query: 719 P 719
           P
Sbjct: 585 P 585



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 6/287 (2%)

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           L+   +  R+    K+ HA ++  G+  +  + + LI+MY K   +  A Q+F K     
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR-- 145

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           RD  +WN++I+ Y Q G  ++AF  F +M      P+ +T  S+L AC     +E GK++
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKI 205

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H   I     ++  V  SL++MY K   +  A  VF+ I  ++ V+Y TM+  Y Q    
Sbjct: 206 HSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           E  + LF  M   GI PD +T++ +L A +   ++DEG +I  L   E  +         
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE-GLNSDIRVGTA 324

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +A M  R G V  A + ++   +   V  ++ +L+ +   HGH E A
Sbjct: 325 LATMFVRCGDVAGAKQALEAFADRDVV--VYNALIAALAQHGHYEEA 369



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           +L T    + +S   + G    AR++FD +     + WN +I G+  N L   A+    Q
Sbjct: 720 ELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQ 779

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M++       + +++ S+L AC+    L  GK VH   ++        V  +L++MY+ C
Sbjct: 780 MQEQG--VVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKC 837

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            S  +A+                  +VFD    +NVV WN +++ Y +     +A+  F 
Sbjct: 838 GSLEEAQ------------------EVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFN 879

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            M + GI+P   +F ++  A +  G
Sbjct: 880 CMDKEGIKPDGSTFTSILSACNHSG 904


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 258/767 (33%), Positives = 415/767 (54%), Gaps = 48/767 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYS 111
           GR   AR+LF+ +   T   WN ++  ++ +    EA+ +Y  M+ S+ P ++ D  T +
Sbjct: 109 GRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLA 168

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           SVLKAC    + R G  VH   ++   + S  V N+L+ MY+ C   LD+ +   ++++ 
Sbjct: 169 SVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC-GLLDSALRVFEWLQQ 227

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           D                R+V +WN++VS  V+  R +EA+  FR M   G   ++ + V 
Sbjct: 228 DA---------------RDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVA 272

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCL 290
           V    + LG       ++  L+K GSE    L +  +A+  MYA+ G  D A ++F    
Sbjct: 273 VLQVCAELGLLSLGRELHAALLKCGSE----LNIQCNALLVMYAKYGRVDSALRVFGQIA 328

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E++   WN+M+  YVQN+   EAI+ F ++L+      D    +S  SA+  L  L+ G+
Sbjct: 329 EKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQ-HGFQPDHACVVSLSSALGHLSRLNNGR 387

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           + HAY IK  +   + V N +++                    RD +SW T+++ F Q+ 
Sbjct: 388 EFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSS 447

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
              E L ++ E+QK+G M+DS+ + ++L     L++  + KQ H Y +R+G+    +E+ 
Sbjct: 448 RHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLDLILENR 507

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LID+Y + G    +  +F++ +   +D  +W +MI   T NG L  A   F +M + N+ 
Sbjct: 508 LIDIYGECGEFDHSLNLFQRVEK--KDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ V + S+L A   + ++  GKQ+HGF IR        V +SL+DMYS  G +NYA  V
Sbjct: 566 PDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRV 625

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F +   K+ V +T MI   G HG  ++A+ LF+ M   G+ PD ++F+A+L ACS++ LV
Sbjct: 626 FERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLV 685

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG    D+M  +Y+++P  EHY CV D+LGR G+  EAYEF+K +  +     +W +LL
Sbjct: 686 EEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKS-AVWCALL 744

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+CR+H +  LA V A KLLE++  N  PG ++L+SN++AE G W N  + R  M ERGL
Sbjct: 745 GACRVHRNYGLAVVAANKLLELEPDN--PGNYILVSNVFAEMGKWNNAKETRTRMAERGL 802

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           RK   CSWI++G  ++ F S D  H  S  I+  L  +   +R  G 
Sbjct: 803 RKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGG 849



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 195/406 (48%), Gaps = 33/406 (8%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF--V 318
           +D F+A+  +FMY   G  D AR++F+    R    WN ++G Y+ +    EA+ ++  +
Sbjct: 93  DDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAM 152

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------ 372
           +         D  T  S L A     +   G ++H   +K  +    +V NA+I      
Sbjct: 153 RASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKC 212

Query: 373 ----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                            RDV SWN+++S  VQNG   E L L   MQ  GF ++S T  A
Sbjct: 213 GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVA 272

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           +L   + L    +G++ HA LL+ G       + L+ MYAK G + +A ++F      ++
Sbjct: 273 VLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVF--GQIAEK 330

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WN+M++ Y QN    EA   F +ML+H   P+   + S+  A   +  +  G++ H
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            ++I+  L  ++ VG +L+DMY K G I  +A VF  +  ++ +++TT++  + Q     
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
            AL +   ++  GI  D++   ++L  C        GL+   L++Q
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCC-------GLKSISLLKQ 489


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 256/771 (33%), Positives = 419/771 (54%), Gaps = 53/771 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +FD ++  +   WN ++ G+V N     A+ +Y +M+      S D+YT+  +LKAC
Sbjct: 11  AEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLG--VSFDSYTFPVLLKAC 68

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +L  G  +H   I+   +   FV NSL+ +Y+ C      ++ G +          
Sbjct: 69  GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKC-----NDINGAR---------- 113

Query: 178 LVCKVFDTMRRRN-VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              K+FD M  RN VV+WN+I+S Y       EA+  F  ML+ G+  +T +F     A 
Sbjct: 114 ---KLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQAC 170

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
                 K    ++  ++K G   V D++VA++ + MY   G    A  IF N   ++   
Sbjct: 171 EDSSFIKLGMQIHAAILKSGR--VLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVT 228

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M+ G++QN    EA+E F  +   D +  D V+ +S + A  +L  L  G+++HAY 
Sbjct: 229 WNSMLTGFIQNGLYSEALEFFYDLQNAD-LKPDQVSIISIIVASGRLGYLLNGKEIHAYA 287

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           IKN     ++V N +I+                    +D++SW T  + + QN    + L
Sbjct: 288 IKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQAL 347

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L+ ++Q +G  +D+  + ++L A   L      K+ H Y +R G+    +++ +ID+Y 
Sbjct: 348 ELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYG 407

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G+I  A +IFE  +   +D  +W +MI+ Y  NGL  +A   F  M E  + P+ VT+
Sbjct: 408 ECGIIDYAVRIFESIEC--KDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTL 465

Query: 517 ASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            S+L A   +  ++ GK++HGF IR  ++L+ ++    +L+DMY++ G +  A  +F   
Sbjct: 466 VSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSI--SNTLVDMYARCGSVEDAYKIFTCT 523

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
             +N + +T MI  YG HG  E A+ LF  MK   I PD ITF+A+L ACS++GLV+EG 
Sbjct: 524 KNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK 583

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
              ++M+ EY+++P  EHY C+ D+LGR   + EAY+ VK +  E    E+W +LLG+CR
Sbjct: 584 SFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTP-EVWCALLGACR 642

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +H + E+ EV A+KLLE+D  N  PG +VL+SN++A  G W++V++VR  M+  GL K  
Sbjct: 643 IHSNKEIGEVAAEKLLELDLDN--PGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNP 700

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           GCSWI+VG  ++ F S+D+ HP+  KIY+ L ++  +++  G    Q   V
Sbjct: 701 GCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFV 751



 Score =  262 bits (670), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 301/603 (49%), Gaps = 54/603 (8%)

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           MY  C S LDAEM                  +FD M  R++  WN ++  YV     + A
Sbjct: 1   MYGKCGSVLDAEM------------------IFDKMSERSIFTWNAMMGGYVSNGEALGA 42

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  +R M  +G+   + +F  +  A   + D      ++GL +K G +  + +FV +S +
Sbjct: 43  LEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCD--SFVFVVNSLV 100

Query: 271 FMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
            +YA+    + ARK+FD    RN  V WN++I  Y  N    EA+ LF ++L+   +V +
Sbjct: 101 ALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAG-VVTN 159

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------- 373
             TF +AL A      + LG Q+HA I+K+   L V V NA++                 
Sbjct: 160 TYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFG 219

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               +D+V+WN+M++ F+QNGL  E L   Y++Q      D V++ +++ A+  L     
Sbjct: 220 NLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLN 279

Query: 430 GKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           GK+ HAY +++G     +  + LIDMYAK   +    + F+      +D  +W    AGY
Sbjct: 280 GKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDL--MAHKDLISWTTAAAGY 337

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            QN    +A    RQ+    +  +   I S+L AC  +  +   K++HG++IR  L   V
Sbjct: 338 AQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV 397

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
              T +ID+Y + G+I+YA  +F  I  K+ V++T+MI  Y  +G++ +AL +F SMK  
Sbjct: 398 LQNT-IIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKET 456

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
           G+EPD +T V++LSA      + +G +I   ++++ + ++ S  +   + DM  R G V 
Sbjct: 457 GLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNT--LVDMYARCGSVE 514

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSN 727
           +AY+       +   L +W +++ +  +HG+ E A    +  + M     +P +   L+ 
Sbjct: 515 DAYKIFT--CTKNRNLILWTAMISAYGMHGYGEAA---VELFMRMKDEKIIPDHITFLAL 569

Query: 728 IYA 730
           +YA
Sbjct: 570 LYA 572



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 225/503 (44%), Gaps = 51/503 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  +F ++     V WN+++ GF+ N L  EA+  +  ++ +      D  +  S
Sbjct: 209 GKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP--DQVSIIS 266

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A      L  GK +H + I+   + +  V N+L++MY+ C               + 
Sbjct: 267 IIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCC-------------MS 313

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y       + FD M  +++++W T  + Y + + Y++A+   R +   G+        ++
Sbjct: 314 YGG-----RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSI 368

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A   L        ++G  ++ G   ++D  + ++ I +Y E G  D+A +IF++   +
Sbjct: 369 LLACRGLNCLGKIKEIHGYTIRGG---LSDPVLQNTIIDVYGECGIIDYAVRIFESIECK 425

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W +MI  YV N    +A+E+F  + E   +  D VT +S LSAV  L  L  G+++
Sbjct: 426 DVVSWTSMISCYVHNGLANKALEVFSSMKETG-LEPDYVTLVSILSAVCSLSTLKKGKEI 484

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H +II+    L   + N +++                    R+++ W  MISA+  +G  
Sbjct: 485 HGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYG 544

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESY- 450
           +  + L   M+ +  + D +T  ALL A S+    + GK +   +++     E   E Y 
Sbjct: 545 EAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGK-SFLEIMKCEYQLEPWPEHYT 603

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D+  +   ++ A QI  K+   +     W A++     +   E   VA  ++LE ++
Sbjct: 604 CLVDLLGRRNCLEEAYQIV-KSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDL 662

Query: 510 T--PNVVTIASVLPACNPMGNIE 530
               N V +++V  A     ++E
Sbjct: 663 DNPGNYVLVSNVFAANGRWKDVE 685


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/771 (33%), Positives = 412/771 (53%), Gaps = 56/771 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTY 110
           GR   A +LFD +   T   WN +I   + +    EA+ +Y  M+ S P      D  T 
Sbjct: 107 GRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTL 166

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +SVLKAC    + R G  VH   ++   + S  V N+L+ MY+ C         GL    
Sbjct: 167 ASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKC---------GL---- 213

Query: 171 VDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                 D   +VF+ MR  R+V +WN+ +S  V+   ++EA+  FR M   G   ++ + 
Sbjct: 214 -----LDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTT 268

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEY---VNDLFVASSAIFMYAELGCFDFARKIF 286
           V V    + L        ++  L+K G+E+    N L V      MYA  G  D A ++F
Sbjct: 269 VGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV------MYARCGWVDSALRVF 322

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               +++   WN+M+  YVQN    EAI+ F ++++ +    D    +S LSAV  L  L
Sbjct: 323 REIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQ-NGFNPDHACIVSLLSAVGHLGRL 381

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
             G+++HAY +K  +   + + N +++                    +D VSW T+I+ +
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACY 441

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q+    E +      QK+G  +D + + ++L A S L++  + KQ H+Y +R+G+    
Sbjct: 442 AQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLI 501

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +++ +ID+Y + G +  A  IFE  D   +D  TW +M+  + +NGLL EA   F +ML 
Sbjct: 502 LKNRIIDIYGECGEVCYALNIFEMLDK--KDIVTWTSMVNCFAENGLLHEAVALFGKMLN 559

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+ V +  +L A   + ++  GK++HGF IR        V +SL+DMYS  G +NY
Sbjct: 560 AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 619

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +   K+ V +T MI   G HG  ++A+ +F+ M   G+ PD ++F+A+L ACS+
Sbjct: 620 ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           + LVDEG    D+M  +YK+QP  EHY CV D+LGR G+  EAY+F+K +  E   + +W
Sbjct: 680 SKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSV-VW 738

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR+H + ELA +   KLLE++  N  PG +VL+SN++AE G W NV ++R +M 
Sbjct: 739 CALLGACRIHKNHELAMIATDKLLELEPDN--PGNYVLVSNVFAEMGKWNNVKEIRTKMT 796

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           E+GLRK+  CSWI++G  V+ F ++D  H  S  I+  L  +  ++R  G 
Sbjct: 797 EQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQ 847



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 35/404 (8%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A+  +FMY + G    A ++FD    R    WN +IG  + +    EA+ ++ + +  
Sbjct: 94  FLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVY-RAMRA 152

Query: 324 DEIVF----DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
            E V     D  T  S L A     +   G ++H   +K+ +    +V NA++       
Sbjct: 153 SEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCG 212

Query: 373 --------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          RDV SWN+ IS  VQNG+  E L L   MQ  GF ++S T   +L
Sbjct: 213 LLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVL 272

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
              + L   + G++ HA LL+ G  F    + L+ MYA+ G + +A ++F   + GD+D 
Sbjct: 273 QVCAELAQLNHGRELHAALLKCGTEFNIQCNALLVMYARCGWVDSALRVFR--EIGDKDY 330

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +WN+M++ Y QN L  EA   F +M+++   P+   I S+L A   +G +  G+++H +
Sbjct: 331 ISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAY 390

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           +++  LD ++ +  +L+DMY K   +  +A VF ++  K+ V++TT+I  Y Q      A
Sbjct: 391 AVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEA 450

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           +  FR+ +  GI+ D +   ++L ACS       GL+   L++Q
Sbjct: 451 IGKFRTAQKEGIKVDPMMMGSILEACS-------GLKSISLLKQ 487


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 249/725 (34%), Positives = 405/725 (55%), Gaps = 59/725 (8%)

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYS 153
           SS  ++ D   Y S+L+ CAE +++R G+ V     R     S  + + +L      MY 
Sbjct: 142 SSQNSNFDLGAYCSILQLCAERKSIRDGRRV-----RSIIESSGVMIDGILGVKLVFMYV 196

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C    +  MV                  FD +    +  WN ++S Y  +  Y E++  
Sbjct: 197 KCGDLKEGRMV------------------FDKLSESKIFLWNLMISEYSGSGNYGESINL 238

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F+ ML +GI+P++ +F ++    +++   +    V+GL+ KLG    N   V +S I  Y
Sbjct: 239 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNT--VVNSLISFY 296

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
                   A+K+FD   +R+   WN+MI GYV+N      IE+F+++L    +  D  T 
Sbjct: 297 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFG-VDIDLATM 355

Query: 334 LSALSAVSQLQELDLGQQLHAYIIK----------NFVALPVIV----LNAVI------- 372
           ++   A + +  L LG+ LH+Y IK          N   L +      LN+ I       
Sbjct: 356 VNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMD 415

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           E+ VVSW +MI+ +V+ GL D  + L  EM+ +G + D   VT++L+A +   N   GK 
Sbjct: 416 EKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKI 475

Query: 433 THAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            H Y+  + +      S  L DMYAK G +K A  +F  +    +D  +WN MI GYT+N
Sbjct: 476 VHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVF--SHMKKKDVISWNTMIGGYTKN 533

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
            L  EA   F +M +    P+  T+A +LPAC  +  ++ G+++HG+++R    ++ +V 
Sbjct: 534 SLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVT 592

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +++DMY K G++  A ++F  IP K+ V++T MI GYG HG    A++ F  M+  GIE
Sbjct: 593 NAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD ++F+++L ACS++GL+DEG +IF++M++E +I+P+ EHY C+ D+L R G +V+A++
Sbjct: 653 PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
           F+K +  + +   IWG+LL  CR+H   +LAE VA+++ E++  N+  GY+VLL+NIYAE
Sbjct: 713 FIKAMPIKPDA-TIWGALLCGCRIHHDVKLAEKVAERIFELEPENT--GYYVLLANIYAE 769

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
              WE V K+RK++ +RGL+K  GCSWI++ G +N F + D   PQ+ KI  +L+RL  +
Sbjct: 770 AEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSK 829

Query: 792 MRNAG 796
           M+  G
Sbjct: 830 MKEEG 834



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 171/645 (26%), Positives = 294/645 (45%), Gaps = 83/645 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R +FD ++     +WN +I  +  +    E+I L+ QM +       ++YT+SS+LK  
Sbjct: 204 GRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELG--IKPNSYTFSSILKCF 261

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +  G+ VH    +   N    V NSL++ Y           VG         K  
Sbjct: 262 AAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY----------FVG--------RKVR 303

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+FD +  R+V++WN+++S YVK       +  F  ML  G+     + VNVF A +
Sbjct: 304 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++G      V++   +K  +    ++   ++ + MY++ G  + A ++F+   E+    W
Sbjct: 364 NIGTLLLGKVLHSYSIK-AATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSW 422

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            +MI GYV+      AI+LF + ++   +V D     S L+A +    L  G+ +H YI 
Sbjct: 423 TSMITGYVREGLSDGAIKLFDE-MKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +N +     V NA+ +                    +DV+SWNTMI  + +N L +E L 
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALT 541

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
           L  EMQ++    D  TV  +L A ++L   D G++ H Y LR+G   +  + + ++DMY 
Sbjct: 542 LFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYV 600

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K GL+  AR +F+     ++D  +W  MIAGY  +G   EA   F QM    + P+ V+ 
Sbjct: 601 KCGLLVLARSLFDMIP--NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF 658

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S+L AC+  G               LLD+    G  + ++  K   I           E
Sbjct: 659 ISILYACSHSG---------------LLDE----GWKIFNIMKKECQI-----------E 688

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            N   Y  M+    + G   +A    ++M    I+PDA  + A+L  C     V    ++
Sbjct: 689 PNLEHYACMVDLLARTGNLVKAHKFIKAMP---IKPDATIWGALLCGCRIHHDVKLAEKV 745

Query: 637 FDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
               ++ ++++P +T +Y  +A++     K  E  +  K++G+ G
Sbjct: 746 ---AERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRG 787



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 222/487 (45%), Gaps = 51/487 (10%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRP-HLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H L   +      T+ + L      GR    A++LFD +T    + WN++I G+V N 
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSR 142
           L    I ++ +M         D  T  +V  ACA    L +GK +H + I+        R
Sbjct: 332 LDDRGIEIFIKMLVFG--VDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           F  N+LL+MYS C   L++ +                 +VF+ M  + VV+W ++++ YV
Sbjct: 390 F-NNTLLDMYSKC-GDLNSAI-----------------RVFERMDEKTVVSWTSMITGYV 430

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +      A++ F  M   G+ P   +  ++  A +  G+ KS  +V+  + +   E   +
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE--TN 488

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
            FV+++   MYA+ G    A  +F +  +++   WNTMIGGY +N+ P EA+ LF ++  
Sbjct: 489 SFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR 548

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
             E   D  T    L A + L  LD G+++H Y ++N  +    V NAV++         
Sbjct: 549 --ESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLV 606

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      +D+VSW  MI+ +  +G   E +    +M+  G   D V+  ++L A S
Sbjct: 607 LARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +    D G +    + +       +E Y  ++D+ A++G +  A + F K      D   
Sbjct: 667 HSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK-FIKAMPIKPDATI 725

Query: 481 WNAMIAG 487
           W A++ G
Sbjct: 726 WGALLCG 732


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 268/802 (33%), Positives = 433/802 (53%), Gaps = 59/802 (7%)

Query: 26  QIHSLSPPIPKLKTPTIR-SRLS---KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           +IH+     P  +   +  +RL     IC    P+ +  +F++  R    +WN ++ G++
Sbjct: 114 KIHNFISTSPHFQNDVVLITRLVTMYSICDS--PYDSCLVFNASRRKNLFLWNALLSGYL 171

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            N+L  +A+ ++ +M   + +   DN+T   V+KAC    ++R+G+AVH   ++      
Sbjct: 172 RNSLFRDAVFVFVEMISLTEFVP-DNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSD 230

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
            FV N+L+ MY               +VE          KVFD M +RN+V+WN+++   
Sbjct: 231 VFVGNALIAMYGK-----------FGFVES-------AVKVFDKMPQRNLVSWNSVMYAC 272

Query: 202 VKTERYVEAVRQFRMMLR--MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
           ++   + E+   F+ +L    G+ P   + V V P  +  G+ +   V +GL +KLG   
Sbjct: 273 LENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLG--L 330

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             +L V SS + MY++ G    AR +FD   E+N   WN+MIGGY ++     A EL  +
Sbjct: 331 CGELKVNSSLLDMYSKCGYLCEARVLFDTN-EKNVISWNSMIGGYSKDRDFRGAFELLRK 389

Query: 320 VLELDEIVFDDVTFLSALSAVSQ-LQELDLGQQLHAYIIKN-FVALPVIVLNAVI----- 372
           +   D++  ++VT L+ L    + +Q L L +++H Y +++ F+    +V NA +     
Sbjct: 390 MQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KEIHGYALRHGFIQSDELVANAFVAGYAK 448

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           + V SWN +I   VQNG   + L L   M+  G   D  T+ +L
Sbjct: 449 CGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASL 508

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           LSA + L++   GK+ H  +LR+G    E +   L+ +Y + G I  A+  F+  +  ++
Sbjct: 509 LSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME--EK 566

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           +   WN MI G++QN    +A   F QML   + P+ ++I   L AC+ +  + LGK+LH
Sbjct: 567 NLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELH 626

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            F+++  L ++ FV  SLIDMY+K G +  + N+F ++  K  VT+  +I GYG HG   
Sbjct: 627 CFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGR 686

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
           +A+ LF+SM+  G  PD++TF+A+L+AC++AGLV EGL+    MQ  + I+P  EHY CV
Sbjct: 687 KAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACV 746

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            DMLGR G++ EA E V EL ++ +   IW SLL SCR +   ++ E VA KLLE+    
Sbjct: 747 VDMLGRAGRLNEALELVNELPDKPDS-RIWSSLLSSCRNYRDLDIGEKVANKLLELGPDK 805

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           +    +VL+SN YA  G W+ V K+R+ M+E GL+K+ GCSWI++GG V+RF   D+   
Sbjct: 806 AEN--YVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLL 863

Query: 777 QSHKIYEMLERLAMEMRNAGNK 798
           QS KI +    L  ++   G K
Sbjct: 864 QSMKIQQTWIELEKKINKIGYK 885



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/620 (26%), Positives = 290/620 (46%), Gaps = 60/620 (9%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRC---FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +L+ C E +N+ IG+ +H +FI     F N    +   L+ MYS C S  D+        
Sbjct: 99  LLQLCGEYKNIEIGRKIH-NFISTSPHFQNDVVLI-TRLVTMYSICDSPYDS-------- 148

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTIS 228
                     C VF+  RR+N+  WN ++S Y++   + +AV  F  M+ +    P   +
Sbjct: 149 ----------CLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFT 198

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
              V  A   + D +  + V+G  +K  ++ ++D+FV ++ I MY + G  + A K+FD 
Sbjct: 199 LPCVIKACVGVYDVRLGEAVHGFALK--TKVLSDVFVGNALIAMYGKFGFVESAVKVFDK 256

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV-TFLSALSAVSQLQELD 347
             +RN   WN+++   ++N    E+  LF  +L  DE +  DV T ++ +   ++  E+ 
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVR 316

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQ 388
           LG   H   +K  +   + V ++++                   E++V+SWN+MI  + +
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSK 376

Query: 389 NGLDDEGLMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFE 445
           +        L+ +MQ +    ++ VT+  +L            K+ H Y LRHG     E
Sbjct: 377 DRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDE 436

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + +  +  YAK G +  A  +F   +S  +  ++WNA+I G+ QNG   +A   +  M 
Sbjct: 437 LVANAFVAGYAKCGSLHYAEGVFCGMES--KMVSSWNALIGGHVQNGFPRKALDLYLLMR 494

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              + P++ TIAS+L AC  + ++  GK++HG  +R   + + F+  SL+ +Y + G I 
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F  + EKN V + TMI G+ Q+     AL +F  M    I PD I+ +  L ACS
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEH---YCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
               +  G ++     + +     TEH    C + DM  + G + ++      +  +G V
Sbjct: 615 QVSALRLGKELHCFAVKSH----LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV 670

Query: 683 LEIWGSLLGSCRLHGHSELA 702
              W  L+    +HGH   A
Sbjct: 671 --TWNVLITGYGIHGHGRKA 688



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 9/202 (4%)

Query: 516 IASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           I  +L  C    NIE+G+++H F S       +V + T L+ MYS       +  VF   
Sbjct: 96  IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSAC--SYAGLVD 631
             KN   +  ++ GY ++ +   A+ +F  M       PD  T   V+ AC   Y   + 
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           E +  F L   + K+         +  M G+ G V  A +   ++ +    L  W S++ 
Sbjct: 216 EAVHGFAL---KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRN--LVSWNSVMY 270

Query: 692 SCRLHGHSELAEVVAKKLLEMD 713
           +C  +G  E +  + K LL  D
Sbjct: 271 ACLENGVFEESYGLFKGLLNGD 292


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/714 (34%), Positives = 403/714 (56%), Gaps = 51/714 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D++T+  VLKAC    ++  G  +H   I+C  +   FV NSL++MY+ C   L A    
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGAR--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRN-VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                          K+FD M  RN VV+WN+I+S Y    + +EA+  FR M + G+  
Sbjct: 66  ---------------KLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGA 110

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +T + V    A       K    ++  ++K  S  V D++VA++ + M+   G   +A +
Sbjct: 111 NTYTLVAALQACEDSSFKKLGMEIHAAILK--SNQVLDVYVANALVAMHVRFGKMSYAAR 168

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           IFD   E++   WN+MI G+ QN    EA++ F   L+   +  D+V+ +S L+A  +L 
Sbjct: 169 IFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCG-LQDANLKPDEVSLISILAASGRLG 227

Query: 345 ELDLGQQLHAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTMIS 384
            L  G+++HAY +KN+                    VA   +V + +I +D++SW T+I+
Sbjct: 228 YLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIA 287

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           A+ QN    E L L+ ++Q +G  +D++ + + L A S LR     K+ H Y L+ G+  
Sbjct: 288 AYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSD 347

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             M++ +ID+YA  G I  A ++FE      +D  +W +MI+ Y  NGL  EA   F  M
Sbjct: 348 LMMQNMIIDVYADCGNINYATRMFESIKC--KDVVSWTSMISCYVHNGLANEALGVFYLM 405

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSG 562
            E +V P+ +T+ S+L A   +  +  GK++HGF  R  ++L+ +     SL+DMY+  G
Sbjct: 406 KETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTV--NSLVDMYACCG 463

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A  VF     K+ V +TTMI  YG HG  + A+ LF  M+   + PD ITF+A+L 
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLY 523

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS++GL++EG ++ + M+ +Y+++P  EHY C+ D+LGR   + EAY FVK +  E   
Sbjct: 524 ACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA 583

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
            E+W + LG+CR+H + +L E+ A+KLL++D  +  PG +VL+SN++A  G W++V++VR
Sbjct: 584 -EVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDS--PGSYVLISNVFAASGRWKDVEEVR 640

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             M+  GL+K  GCSWI+VG  V+ F  +D+ HP+S+KIY+ L ++  ++   G
Sbjct: 641 MRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEG 694



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 276/537 (51%), Gaps = 36/537 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M  +G+   + +F  V  A   + D      ++GL++K G  Y + +FVA+S + MYA+ 
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCG--YDSIVFVANSLVSMYAKC 58

Query: 277 GCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
                ARK+FD   ERN  V WN++I  Y  N   +EA+ LF + ++   +  +  T ++
Sbjct: 59  NDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFRE-MQKAGVGANTYTLVA 117

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
           AL A        LG ++HA I+K+   L V V NA++                    E+D
Sbjct: 118 ALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            ++WN+MI+ F QNGL +E L     +Q      D V++ ++L+A+  L     GK+ HA
Sbjct: 178 NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           Y +++ +     + + LIDMY+K   +  A  +F+K    ++D  +W  +IA Y QN   
Sbjct: 238 YAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMI--NKDLISWTTVIAAYAQNNCH 295

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            EA    R++    +  + + I S L AC+ +  +   K++HG++++  L  ++ +   +
Sbjct: 296 TEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMI 354

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           ID+Y+  G INYA  +F  I  K+ V++T+MI  Y  +G++  AL +F  MK   +EPD+
Sbjct: 355 IDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDS 414

Query: 615 ITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
           IT V++LSA +    +++G +I   + ++ + ++ ST +   + DM    G +  AY+  
Sbjct: 415 ITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNS--LVDMYACCGSLENAYKVF 472

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             +      L +W +++ +  +HG  + A    +    M+ +  +P +   L+ +YA
Sbjct: 473 --ICTRSKSLVLWTTMINAYGMHGRGKAA---VELFSIMEDQKLIPDHITFLALLYA 524



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/590 (25%), Positives = 274/590 (46%), Gaps = 83/590 (14%)

Query: 58  ARQLFDSIT-RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           AR+LFD +  R   V WN+II  +  N    EA+ L+ +M+K+      + YT  + L+A
Sbjct: 64  ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAG--VGANTYTLVAALQA 121

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C ++   ++G  +H   ++       +V N+L+ M+                  V + K 
Sbjct: 122 CEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMH------------------VRFGKM 163

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++FD +  ++ + WN++++ + +   Y EA++ F  +    ++P  +S +++  A 
Sbjct: 164 SYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAAS 223

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             LG   +   ++   +K  +   ++L + ++ I MY++  C  +A  +FD  + ++   
Sbjct: 224 GRLGYLLNGKEIHAYAMK--NWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLIS 281

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W T+I  Y QNN   EA++L  +V +   +  D +   S L A S L+ L   +++H Y 
Sbjct: 282 WTTVIAAYAQNNCHTEALKLLRKV-QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYT 340

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           +K  ++  +++ N +I+                    +DVVSW +MIS +V NGL +E L
Sbjct: 341 LKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEAL 399

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMY 455
            + Y M++     DS+T+ ++LSAA++L   + GK+ H ++ R G   EG   + L+DMY
Sbjct: 400 GVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMY 459

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A  G ++ A ++F    S  +    W  MI  Y  +G  + A   F  M +  + P+ +T
Sbjct: 460 ACCGSLENAYKVFICTRS--KSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHIT 517

Query: 516 IASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             ++L AC+  G I  GK+ L     +Y L+                             
Sbjct: 518 FLALLYACSHSGLINEGKRLLETMKCKYQLE---------------------------PW 550

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           PE     Y  ++   G+    E A    +SM+   IEP A  + A L AC
Sbjct: 551 PEH----YACLVDLLGRANHLEEAYHFVKSMQ---IEPTAEVWCAFLGAC 593



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 184/391 (47%), Gaps = 44/391 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A ++FD +     + WN++I GF  N L  EA+  +  ++ ++     D  +  S
Sbjct: 161 GKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKP--DEVSLIS 218

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A      L  GK +H + ++ + + +  + N+L++MYS C     A +         
Sbjct: 219 ILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGL--------- 269

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VFD M  +++++W T+++ Y +   + EA++  R +   G+   T+   + 
Sbjct: 270 ---------VFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGST 320

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L     A  V+G  +K G   ++DL + +  I +YA+ G  ++A ++F++   +
Sbjct: 321 LLACSGLRCLSHAKEVHGYTLKRG---LSDLMMQNMIIDVYADCGNINYATRMFESIKCK 377

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W +MI  YV N    EA+ +F  + E   +  D +T +S LSA + L  L+ G+++
Sbjct: 378 DVVSWTSMISCYVHNGLANEALGVFYLMKE-TSVEPDSITLVSILSAAASLSALNKGKEI 436

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H +I +    L    +N++++                    + +V W TMI+A+  +G  
Sbjct: 437 HGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRG 496

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              + L   M+ Q  + D +T  ALL A S+
Sbjct: 497 KAAVELFSIMEDQKLIPDHITFLALLYACSH 527


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/770 (32%), Positives = 430/770 (55%), Gaps = 50/770 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD ++  T   WN +I   V      EAI LY +M+      S D +T+  VLKAC
Sbjct: 101 AVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLG--VSLDAFTFPCVLKAC 158

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              +  R+G  +H   ++C      FV N+L+ MY+ C      ++ G + +        
Sbjct: 159 GAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKC-----GDLGGARVL-------- 205

Query: 178 LVCKVFDT--MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                FD+  M + + V+WN+I+S +V     +EA+  FR M  +G+  +T +FV+   A
Sbjct: 206 -----FDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQA 260

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
                  K    ++ +++K  S +  D++V+++ I MYA  G  + A ++F + L ++  
Sbjct: 261 CEGPTFIKIGRGIHAVILK--SNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCV 318

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WNT++ G VQN+   +AI  F Q ++      D V+ L+ ++A  +   L  G ++HAY
Sbjct: 319 SWNTLLSGMVQNDMYSDAINHF-QDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            IK+ +   + + N++I                    E+D++SW T+I+ + QN    + 
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA 437

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L+ ++Q +   +D + + ++L A S L+++ + K+ H Y+L+ G+    +++ ++++Y
Sbjct: 438 LNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVY 497

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            +  L+  AR +FE  +S  +D  +W +MI     NGL  EA   F  ++E N+ P+++T
Sbjct: 498 GELALVDYARHVFESINS--KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLIT 555

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + SVL A   + +++ GK++HGF IR        +  SL+DMY++ G +  A N+F  + 
Sbjct: 556 LVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVK 615

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           +++ + +T+MI   G HG  + A+ LF  M    + PD ITF+A+L ACS++GLV EG Q
Sbjct: 616 QRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            F++M+ EYK++P  EHY C+ D+L R   + EAY FV+ +  E +  E+W +LLG+CR+
Sbjct: 676 HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSA-EVWCALLGACRI 734

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H +++L EV AKKLL+++T NS  G +VL+SN +A +G W +V++VR  M+   L+K+ G
Sbjct: 735 HSNNDLGEVAAKKLLQLNTENS--GNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPG 792

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           CSWI+V   ++ F ++D+ HPQ + IY  L +    ++  G    Q   V
Sbjct: 793 CSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLV 842



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 185/650 (28%), Positives = 323/650 (49%), Gaps = 62/650 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSN-PSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
            YS  L+ CA  + L  G+ +H HF++  +   S F+    ++MY  C S  DA      
Sbjct: 48  AYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDA------ 101

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                        KVFD M  R +  WN ++   V   RYVEA+  ++ M  +G+     
Sbjct: 102 ------------VKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAF 149

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V  A  +  + +    ++G+ VK G  Y   +FV ++ I MYA+ G    AR +FD
Sbjct: 150 TFPCVLKACGAFKERRLGCEIHGVAVKCG--YGGFVFVCNALIAMYAKCGDLGGARVLFD 207

Query: 288 NCL-ERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           + L E++  V WN++I  +V     +EA+ LF ++ E+  +  +  TF+SAL A      
Sbjct: 208 SGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG-VESNTYTFVSALQACEGPTF 266

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           + +G+ +HA I+K+     V V NA+I                     +D VSWNT++S 
Sbjct: 267 IKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSG 326

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            VQN +  + +    +MQ  G   D V+V  +++A+    N   G + HAY ++HGI   
Sbjct: 327 MVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSN 386

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + LIDMY K   +K     FE     ++D  +W  +IAGY QN    +A    R++
Sbjct: 387 MHIGNSLIDMYGKCCCVKYMGSAFEY--MPEKDLISWTTIIAGYAQNECHLDALNLLRKV 444

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               +  + + I S+L AC+ + + +L K++HG+ ++  L  ++ +  +++++Y +  ++
Sbjct: 445 QLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALV 503

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           +YA +VF  I  K+ V++T+MI     +G++  AL LF S+    IEPD IT V+VL A 
Sbjct: 504 DYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAA 563

Query: 625 SYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEA---YEFVKELGEEG 680
           +    + +G +I   L+++ + ++    +   + DM  R G +  A   + +VK+     
Sbjct: 564 AALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVDMYARCGTMENARNIFNYVKQRD--- 618

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             L +W S++ +  +HG  + A  +  K   M   N +P +   L+ +YA
Sbjct: 619 --LILWTSMINANGMHGCGKDAIDLFSK---MTDENVLPDHITFLALLYA 663



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 242/508 (47%), Gaps = 61/508 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A ++F S+     V WNT++ G V N++  +AI  +  M+ S      D  +  +
Sbjct: 300 GQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKP--DQVSVLN 357

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A   + NL  G  VH + I+   + +  + NSL++MY  C          +KY+   
Sbjct: 358 MIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC--------VKYMG-- 407

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR--MMLRMGIRPSTISFV 230
                     F+ M  +++++W TI++ Y + E +++A+   R   + +M + P  I   
Sbjct: 408 --------SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG-- 457

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  A S L   K    ++G ++K G   + D+ + ++ + +Y EL   D+AR +F++  
Sbjct: 458 SILLACSGLKSEKLIKEIHGYVLKGG---LADILIQNAIVNVYGELALVDYARHVFESIN 514

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            ++   W +MI   V N   +EA+ELF  ++E + I  D +T +S L A + L  L  G+
Sbjct: 515 SKDIVSWTSMITCCVHNGLAIEALELFNSLIETN-IEPDLITLVSVLYAAAALSSLKKGK 573

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           ++H ++I+    L  ++ N+++                    +RD++ W +MI+A   +G
Sbjct: 574 EIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHG 633

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
              + + L  +M  +  + D +T  ALL A S+      GKQ H  ++++    E    +
Sbjct: 634 CGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEH 692

Query: 451 ---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG---YTQNGLLEEAFVAFRQM 504
              L+D+ A+S  ++ A   F +N   +     W A++     ++ N L E   VA +++
Sbjct: 693 YACLVDLLARSNSLEEAYH-FVRNMPIEPSAEVWCALLGACRIHSNNDLGE---VAAKKL 748

Query: 505 LEHNV--TPNVVTIASVLPACNPMGNIE 530
           L+ N   + N V +++   A     ++E
Sbjct: 749 LQLNTENSGNYVLVSNTFAADGRWNDVE 776



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 62/144 (43%), Gaps = 20/144 (13%)

Query: 494 LEEAFVAFRQMLEHNVTPNVVTI---------ASVLPACNPMGNIELGKQLHGFSIRYLL 544
           L+EAF    Q L H  T  + T          +  L  C     +  G+QLH     +L 
Sbjct: 22  LKEAF----QSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHA---HFLK 74

Query: 545 DQN----VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
            QN    VF+ T  + MY K G    A  VF K+ E+   T+  MI      G    A+ 
Sbjct: 75  TQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIE 134

Query: 601 LFRSMKGCGIEPDAITFVAVLSAC 624
           L++ M+  G+  DA TF  VL AC
Sbjct: 135 LYKEMRVLGVSLDAFTFPCVLKAC 158


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 247/709 (34%), Positives = 402/709 (56%), Gaps = 52/709 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y SVL+ CAE ++L  GK VH          S  + N +         S+D E +G K 
Sbjct: 96  SYCSVLQLCAEKKSLEDGKRVH----------SVIISNGI---------SVD-EALGAKL 135

Query: 169 VEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           V +  +  DLV   K+FD +    V  WN ++S Y K   + E+V  F+ M ++G+  + 
Sbjct: 136 VFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC 195

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  V    ++LG  K    V+G ++KLG  + ++  V +S I  Y + G  + A  +F
Sbjct: 196 YTFTCVLKCFAALGKVKECKRVHGYVLKLG--FGSNTAVVNSLIAAYFKFGGVESAHNLF 253

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   E +   WN+MI G V N      +E+F+Q+L L  +  D  T +S L A + +  L
Sbjct: 254 DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVACANIGNL 312

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
            LG+ LH + +K   +  V+  N +++                      +VSW ++I+A+
Sbjct: 313 SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
           V+ GL  + + L  EMQ +G   D  TVT+++ A +   + D G+  H+Y++++G+    
Sbjct: 373 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 432

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + LI+MYAK G ++ AR +F K     +D  +WN MI GY+QN L  EA   F  M 
Sbjct: 433 PVTNALINMYAKCGSVEEARLVFSKIPV--KDIVSWNTMIGGYSQNLLPNEALELFLDM- 489

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +    P+ +T+A VLPAC  +  ++ G+++HG  +R     ++ V  +L+DMY+K G++ 
Sbjct: 490 QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 549

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  +F  IP+K+ +++T MI GYG HG    A+S F  M+  GIEPD  +F A+L+ACS
Sbjct: 550 LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS 609

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++GL++EG + F+ M+ E  ++P  EHY CV D+L R+G + +AY+F++ +  + +   I
Sbjct: 610 HSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDT-TI 668

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG LL  CR+H   +LAE VA+ + E++  N+   Y+V+L+N+YAE   WE V K+RK M
Sbjct: 669 WGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTR--YYVVLANVYAEAEKWEEVKKLRKRM 726

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           ++RG ++  GCSWI+VGG  N F + + +HPQ+ KI  +L +L M+M+N
Sbjct: 727 QKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQN 775



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 241/497 (48%), Gaps = 49/497 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++FD I      +WN ++  +       E++ L+ +M+K     +C  YT++ VLK  
Sbjct: 148 GRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC--YTFTCVLKCF 205

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    ++  K VH + ++     +  V NSL+  Y              K+  V+ S ++
Sbjct: 206 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY-------------FKFGGVE-SAHN 251

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L    FD +   +VV+WN++++  V        +  F  ML +G+     + V+V  A +
Sbjct: 252 L----FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACA 307

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++G+      ++G  VK  + +  ++  +++ + MY++ G  + A ++F    +     W
Sbjct: 308 NIGNLSLGRALHGFGVK--ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 365

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I  YV+     +AI LF + ++   +  D  T  S + A +    LD G+ +H+Y+I
Sbjct: 366 TSIIAAYVREGLYSDAIGLFDE-MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVI 424

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           KN +   + V NA+I                     +D+VSWNTMI  + QN L +E L 
Sbjct: 425 KNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALE 484

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  +MQKQ F  D +T+  +L A + L   D G++ H ++LR G +F  +     L+DMY
Sbjct: 485 LFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG-YFSDLHVACALVDMY 542

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK GL+  A+ +F+      +D  +W  MIAGY  +G   EA   F +M    + P+  +
Sbjct: 543 AKCGLLVLAQLLFDMIPK--KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 600

Query: 516 IASVLPACNPMGNIELG 532
            +++L AC+  G +  G
Sbjct: 601 FSAILNACSHSGLLNEG 617



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 216/483 (44%), Gaps = 71/483 (14%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T  + S ++   + G    A  LFD ++ P  V WN++I G V N      + ++ QM  
Sbjct: 230 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 289

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLS 157
                  D  T  SVL ACA   NL +G+A+H   ++ CFS    F  N+LL+MYS C  
Sbjct: 290 LG--VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVF-SNTLLDMYSKC-- 344

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                              +   +VF  M    +V+W +I++ YV+   Y +A+  F  M
Sbjct: 345 ----------------GNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEM 388

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
              G+RP   +  ++  A +          V+  ++K G    ++L V ++ I MYA+ G
Sbjct: 389 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMG--SNLPVTNALINMYAKCG 446

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + AR +F     ++   WNTMIGGY QN  P EA+ELF+ + +  +   DD+T    L
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK--QFKPDDITMACVL 504

Query: 338 SAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVV 377
            A + L  LD G+++H +I++                      + L  ++ + + ++D++
Sbjct: 505 PACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLI 564

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SW  MI+ +  +G  +E +    EM+  G   D  + +A+L+A S           H+ L
Sbjct: 565 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS-----------HSGL 613

Query: 438 LRHGIHF-----------EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           L  G  F             +E Y  ++D+ A+ G +  A +  E       D   W  +
Sbjct: 614 LNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI-KPDTTIWGVL 672

Query: 485 IAG 487
           ++G
Sbjct: 673 LSG 675


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/709 (34%), Positives = 400/709 (56%), Gaps = 52/709 (7%)

Query: 109  TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
            +Y SVL+ CAE ++L  GK VH          S  + N +         S+D E +G K 
Sbjct: 371  SYCSVLQLCAEKKSLEDGKRVH----------SVIISNGI---------SID-EALGAKL 410

Query: 169  VEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
            V +  +  DLV   K+FD +    V  WN ++S Y K   + E+V  F+ M ++G+  + 
Sbjct: 411  VFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC 470

Query: 227  ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
             +F  V    ++LG  K    V+G ++KLG  + ++  V +S I  Y + G  + A  +F
Sbjct: 471  YTFTCVLKCFAALGKVKECKRVHGYVLKLG--FGSNTAVVNSLIAAYFKFGGVESAHNLF 528

Query: 287  DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            D   E +   WN+MI G V N      +E+F+Q+L L  +  D  T +S L A + +  L
Sbjct: 529  DELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVAWANIGNL 587

Query: 347  DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
             LG+ LH + +K   +  V+  N +++                      +VSW + I+A+
Sbjct: 588  SLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647

Query: 387  VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            V+ GL  + + L  EMQ +G   D  TVT+++ A +   + D G+  H+Y++++G+    
Sbjct: 648  VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 707

Query: 446  GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
             + + LI+MYAK G ++ AR +F K     +D  +WN MI GY+QN L  EA   F  M 
Sbjct: 708  PVTNALINMYAKCGSVEEARLVFSKIPV--KDIVSWNTMIGGYSQNSLPNEALELFLDM- 764

Query: 506  EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
            +    P+ +T+A VLPAC  +  ++ G+++HG  +R     ++ V  +L+DMY+K G++ 
Sbjct: 765  QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 824

Query: 566  YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             A  +F  IP+K+ +++T MI GYG HG    A+S F  M+  GIEPD  +F  +L+ACS
Sbjct: 825  LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS 884

Query: 626  YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            ++GL++EG + F+ M+ E  ++P  EHY CV D+L R+G + +AY+F++ +  + +   I
Sbjct: 885  HSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDT-TI 943

Query: 686  WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
            WG LL  CR+H   +LAE VA+ + E++  N+   Y+V+L+N+YAE   WE V K+RK M
Sbjct: 944  WGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTR--YYVVLANVYAEAEKWEEVKKLRKRM 1001

Query: 746  RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
            ++RG ++  GCSWI+VGG  N F + + +HPQ+ +I  +L +L M+M+N
Sbjct: 1002 QKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQN 1050



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/553 (25%), Positives = 261/553 (47%), Gaps = 50/553 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++FD I      +WN ++  +       E++ L+ +M+K     +C  YT++ VLK  
Sbjct: 423 GRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNC--YTFTCVLKCF 480

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    ++  K VH + ++     +  V NSL+  Y              K+  V+ S ++
Sbjct: 481 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAY-------------FKFGGVE-SAHN 526

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L    FD +   +VV+WN++++  V        +  F  ML +G+     + V+V  A +
Sbjct: 527 L----FDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWA 582

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++G+      ++G  VK  + +  ++  +++ + MY++ G  + A ++F    +     W
Sbjct: 583 NIGNLSLGRALHGFGVK--ACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSW 640

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            + I  YV+     +AI LF + ++   +  D  T  S + A +    LD G+ +H+Y+I
Sbjct: 641 TSTIAAYVREGLYSDAIGLFDE-MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVI 699

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           KN +   + V NA+I                     +D+VSWNTMI  + QN L +E L 
Sbjct: 700 KNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALE 759

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  +MQKQ F  D +T+  +L A + L   D G++ H ++LR G +F  +     L+DMY
Sbjct: 760 LFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRG-YFSDLHVACALVDMY 817

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK GL+  A+ +F+      +D  +W  MIAGY  +G   EA   F +M    + P+  +
Sbjct: 818 AKCGLLVLAQLLFDMIPK--KDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 875

Query: 516 IASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            + +L AC+  G +  G K  +       ++  +     ++D+ ++ G ++ A      +
Sbjct: 876 FSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESM 935

Query: 575 PEKNSVTYTTMIL 587
           P K   T   ++L
Sbjct: 936 PIKPDTTIWGVLL 948



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 214/483 (44%), Gaps = 71/483 (14%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T  + S ++   + G    A  LFD ++ P  V WN++I G V N      + ++ QM  
Sbjct: 505 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 564

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLS 157
                  D  T  SVL A A   NL +G+A+H   ++ CFS    F  N+LL+MYS C  
Sbjct: 565 LG--VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVF-SNTLLDMYSKC-- 619

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                              +   +VF  M    +V+W + ++ YV+   Y +A+  F  M
Sbjct: 620 ----------------GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEM 663

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
              G+RP   +  ++  A +          V+  ++K G    ++L V ++ I MYA+ G
Sbjct: 664 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMG--SNLPVTNALINMYAKCG 721

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + AR +F     ++   WNTMIGGY QN+ P EA+ELF+ + +  +   DD+T    L
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVL 779

Query: 338 SAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVV 377
            A + L  LD G+++H +I++                      + L  ++ + + ++D++
Sbjct: 780 PACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLI 839

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SW  MI+ +  +G  +E +    EM+  G   D  + + +L+A S           H+ L
Sbjct: 840 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS-----------HSGL 888

Query: 438 LRHGIHF-----------EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           L  G  F             +E Y  ++D+ A+ G +  A +  E       D   W  +
Sbjct: 889 LNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPI-KPDTTIWGVL 947

Query: 485 IAG 487
           ++G
Sbjct: 948 LSG 950


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/767 (34%), Positives = 405/767 (52%), Gaps = 51/767 (6%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            GR   A  LF  +     V WN +I G V      EAI  +  M K+   ++    T  S
Sbjct: 297  GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKST--RSTLGS 354

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL A A    L  G  VH   I+   N + +V +SL+NMY+ C                 
Sbjct: 355  VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKC----------------- 397

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              K +   KVFD +  RN+V WN ++  Y +     + ++ F  M   G  P   ++ ++
Sbjct: 398  -EKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSI 456

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              A + L   +    ++  ++K   EY  +LFV ++ + MYA+ G  + AR+ F+    R
Sbjct: 457  LSACACLECLEMGRQLHSFIIKHNFEY--NLFVENTLVDMYAKCGALEEARQQFEFIRNR 514

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            +   WN +I GYVQ     EA  +F +++ LD I  D+V+  S LS  + LQ L+ G+Q+
Sbjct: 515  DNVSWNAIIVGYVQEEDEDEAFNMFRRMI-LDGIAPDEVSLASILSGCANLQALEQGEQV 573

Query: 353  HAYIIKN---------------FVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLD 392
            H +++K+               +V    I     V + +  R VVS N +I+ + QN L 
Sbjct: 574  HCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV 633

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESY 450
             E + L  EMQ +G     +T  +LL A +     ++G+Q H  + + G+ ++G  +   
Sbjct: 634  -EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVS 692

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            L+ MY  S   KT   I        +    W A+I+G+TQNG  EEA   +++M  +N  
Sbjct: 693  LLVMYMNSQR-KTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNAR 751

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            P+  T ASVL AC+ + ++  G+ +H       LD +   G++++DMY+K G +  +  V
Sbjct: 752  PDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQV 811

Query: 571  FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  KN V ++ +MI+G+ ++G +E AL +F  MK   I PD +TF+ VL+ACS+AG 
Sbjct: 812  FEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGR 871

Query: 630  VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            V EG +IFD+M   YKI P  +H  C+ D+LGR G + EA EF+ +L  E N + IW +L
Sbjct: 872  VSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAM-IWATL 930

Query: 690  LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
            LG+CR+HG        A+KL+E++  NS P  +VLLSNIYA  GNW+ V+ VR+ MRE+G
Sbjct: 931  LGACRIHGDDIRGRRAAEKLIELEPENSSP--YVLLSNIYAASGNWDEVNSVRRAMREKG 988

Query: 750  LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            LRK  GCSWI VG   N F + D+ HP + +I+ +L+ L   M+  G
Sbjct: 989  LRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDG 1035



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 212/727 (29%), Positives = 353/727 (48%), Gaps = 93/727 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A + F+ + +   + WN+++  +       + I  +  ++      S + +TY+ 
Sbjct: 130 GNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG--VSPNQFTYAI 187

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV-------- 164
           VL +CA   ++ +GK VHC  I+     + F   SL++MYS C S +DA  +        
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPD 247

Query: 165 -------------------GLKYVE---------------------VDYSKYDLVCKVFD 184
                               LK  E                     V   + D  C +F 
Sbjct: 248 TVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFV 307

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M   NVVAWN ++S +VK    +EA+  F+ M + G++ +  +  +V  A++SL     
Sbjct: 308 QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY 367

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
             +V+   +K G    ++++V SS I MYA+    + A+K+FD   ERN  +WN M+GGY
Sbjct: 368 GLLVHAQAIKQGLN--SNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGY 425

Query: 305 VQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            QN +  + ++LF    E+    F  D+ T+ S LSA + L+ L++G+QLH++IIK+   
Sbjct: 426 AQNGYASKVMKLFS---EMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFE 482

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + V N +++                    RD VSWN +I  +VQ   +DE   +   M
Sbjct: 483 YNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRM 542

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSG 459
              G   D V++ ++LS  +NL+  + G+Q H +L++ G+    + G  S LIDMY K G
Sbjct: 543 ILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAG--SSLIDMYVKCG 600

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I+ AR +F    S  R   + NA+IAGY QN L+ EA   F++M    + P+ +T AS+
Sbjct: 601 AIEAARYVFSCMPS--RSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASL 657

Query: 520 LPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EK 577
           L AC     + LG+Q+H     R LL    F+G SL+ MY  S     A  +F++    K
Sbjct: 658 LDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPK 717

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           +++ +T +I G+ Q+G SE AL L++ M      PD  TF +VL ACS    + +G  I 
Sbjct: 718 STILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIH 777

Query: 638 DLMQQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            L+   + +   ++      V DM  + G +  + +  +E+G + +V+  W S++     
Sbjct: 778 SLI---FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVIS-WNSMIVGFAK 833

Query: 696 HGHSELA 702
           +G++E A
Sbjct: 834 NGYAENA 840



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 175/349 (50%), Gaps = 24/349 (6%)

Query: 431 KQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           K  HA  L+ G   +G + S ++D+YAK G ++ A + F  N    RD   WN++++ Y+
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAF--NQLEKRDILAWNSVLSMYS 158

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           + G LE+    F  +    V+PN  T A VL +C  + +I+LGKQ+H   I+   + N F
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
              SLIDMYSK G +  A  +F  + + ++V++T MI GY Q G+ E AL +F  M+  G
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLG 278

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV--GKVV 667
           + PD + FV V++AC   G +D+   +F  M       P+T        + G V  G  +
Sbjct: 279 LVPDQVAFVTVITACVGLGRLDDACDLFVQM-------PNTNVVAWNVMISGHVKRGCDI 331

Query: 668 EAYEFVKELGEEG--NVLEIWGSLLGS-CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           EA +F K + + G  +     GS+L +   L   +    V A+ + +    N   G  ++
Sbjct: 332 EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLI 391

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW-IDVGGYV-NRFASK 771
             N+YA+    E   KV   + ER L       W   +GGY  N +ASK
Sbjct: 392 --NMYAKCEKMEAAKKVFDALDERNL-----VLWNAMLGGYAQNGYASK 433


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 257/770 (33%), Positives = 407/770 (52%), Gaps = 54/770 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +FD + R     WN I+  +  N L  +A+ ++S++   + +   DN+T   
Sbjct: 48  GSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP-DNFTLPC 106

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KACA   +L +G+ +H    +       FV N+L+ MY  C   L  E V        
Sbjct: 107 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC--GLVEEAV-------- 156

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMGIRPSTISFV 230
                   KVF+ M  RN+V+WN+I+  + +     E+   FR ML       P   + V
Sbjct: 157 --------KVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLV 208

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V P  +   D +    V+GL VKLG     +L V +S I MY++      A+ +FD   
Sbjct: 209 TVLPVCAGEEDIEKGMAVHGLAVKLGLN--EELMVNNSLIDMYSKCRFLSEAQLLFDKND 266

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDDVTFLSALSAVSQLQELDLG 349
           ++N   WN+MIGGY +         L  ++   D ++  D+ T L+ L    +  EL   
Sbjct: 267 KKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSL 326

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           ++LH Y  ++ +    +V NA I                     + V SWN ++  + QN
Sbjct: 327 KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQN 386

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEG 446
               + L L  +M   G   D  T+ +LL A S +++   G++ H + LR+G+    F G
Sbjct: 387 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 446

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +   L+ +Y   G    A+ +F+  +   R   +WN MIAGY+QNGL +EA   FRQML 
Sbjct: 447 IS--LLSLYICCGKPFAAQVLFDGMEH--RSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P  + I  V  AC+ +  + LGK+LH F+++  L +++FV +S+IDMY+K G I  
Sbjct: 503 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGL 562

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  +F ++ EK+  ++  +I GYG HG  + AL LF  M   G++PD  TF  +L ACS+
Sbjct: 563 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 622

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV++GL+ F+ M   + I+P  EHY CV DMLGR G++ +A   ++E+  + +   IW
Sbjct: 623 AGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDS-RIW 681

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            SLL SCR+HG+  L E VA KLLE++     P  +VL+SN++A  G W++V +VR  M+
Sbjct: 682 SSLLSSCRIHGNLGLGEKVANKLLELEPEK--PENYVLISNLFAGSGKWDDVRRVRGRMK 739

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + GL+K+ GCSWI+VGG V+ F   D+  P+  ++ E   RL +++ + G
Sbjct: 740 DIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIG 789



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/634 (25%), Positives = 307/634 (48%), Gaps = 61/634 (9%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS-LLNMYSTCLSSLDAEMVGLKYVEV 171
           +L+AC + +++ +G+ +H          + FV N+ ++ MYS C S  D+ M        
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRM-------- 55

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                     VFD +RR+N+  WN IVS Y + E + +A+  F  ++ +   +P   +  
Sbjct: 56  ----------VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 105

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V  A + L D     +++G+  K+  + V+D+FV ++ I MY + G  + A K+F++  
Sbjct: 106 CVIKACAGLLDLGLGQIIHGMATKM--DLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV-TFLSALSAVSQLQELDLG 349
           ERN   WN++I G+ +N    E+   F ++L  +E    DV T ++ L   +  ++++ G
Sbjct: 164 ERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKG 223

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
             +H   +K  +   ++V N++I+                    +++VSWN+MI  + + 
Sbjct: 224 MAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYARE 283

Query: 390 GLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EG 446
                   L+ +MQ +   +  D  T+  +L            K+ H Y  RHG+   E 
Sbjct: 284 EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNEL 343

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + +  I  Y + G + ++ ++F+  D+  +  ++WNA++ GY QN    +A   + QM +
Sbjct: 344 VANAFIAAYTRCGALCSSERVFDLMDT--KTVSSWNALLCGYAQNSDPRKALDLYLQMTD 401

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  TI S+L AC+ M ++  G+++HGF++R  L  + F+G SL+ +Y   G    
Sbjct: 402 SGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFA 461

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F  +  ++ V++  MI GY Q+G+ + A++LFR M   GI+P  I  + V  ACS 
Sbjct: 462 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521

Query: 627 AGLVDEG--LQIFDL---MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
              +  G  L  F L   + ++  +  S      + DM  + G +  +      L E+  
Sbjct: 522 LSALRLGKELHCFALKAHLTEDIFVSSS------IIDMYAKGGCIGLSQRIFDRLREKD- 574

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
            +  W  ++    +HG  + A  + +K+L +  +
Sbjct: 575 -VASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/732 (33%), Positives = 411/732 (56%), Gaps = 70/732 (9%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           DNY + ++LKA A+ +++ +GK +H H  +  +   S  V N+L+N+Y  C         
Sbjct: 9   DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC--------- 59

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                      +  V KVFD +  RN V+WN+++S     E++  A+  FR ML   + P
Sbjct: 60  ---------GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 110

Query: 225 STISFVNVFPALSSL----GDYKSADV-VYGLLV-KLGSEYVNDLFVASSAIFMYAELGC 278
           S+ + V+V  A S+L    G      V  YGL   +L S      F+ ++ + MY +LG 
Sbjct: 111 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS------FIINTLVAMYGKLGK 164

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              ++ +  +   R+   WNT++    QN   +EA+E +++ + L+ +  D+ T  S L 
Sbjct: 165 LASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE-YLREMVLEGVEPDEFTISSVLP 223

Query: 339 AVSQLQELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVV 377
           A S L+ L  G++LHAY +KN       FV   ++              V + + +R + 
Sbjct: 224 ACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            WN MI+ + QN  D E L+L   M++  G + +S T+  ++ A          +  H +
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 343

Query: 437 LLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           +++ G+  +  +++ L+DMY++ G I  A +IF K +  DRD  TWN MI GY  +   E
Sbjct: 344 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME--DRDLVTWNTMITGYVFSEHHE 401

Query: 496 EAFVAFRQM--LEHNVT---------PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           +A +   +M  LE  V+         PN +T+ ++LP+C  +  +  GK++H ++I+  L
Sbjct: 402 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 461

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
             +V VG++L+DMY+K G +  +  VF +IP+KN +T+  +I+ YG HG  + A+ L R 
Sbjct: 462 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 521

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M   G++P+ +TF++V +ACS++G+VDEGL+IF +M+ +Y ++PS++HY CV D+LGR G
Sbjct: 522 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 581

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           ++ EAY+ +  +  + N    W SLLG+ R+H + E+ E+ A+ L++++   ++  ++VL
Sbjct: 582 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVL 639

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           L+NIY+  G W+   +VR+ M+E+G+RKE GCSWI+ G  V++F + D  HPQS K+   
Sbjct: 640 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 699

Query: 785 LERLAMEMRNAG 796
           LE L   MR  G
Sbjct: 700 LETLWERMRKEG 711



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 143/456 (31%), Positives = 235/456 (51%), Gaps = 40/456 (8%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M+ +GI+P   +F  +  A++ L D +    ++  + K G   V+ + VA++ + +Y + 
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYG-VDSVTVANTLVNLYRKC 59

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G F    K+FD   ERN   WN++I           A+E F  +L+ + +     T +S 
Sbjct: 60  GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSV 118

Query: 337 LSAVSQL---QELDLGQQLHAY----------IIKNFVAL---------PVIVLNAVIER 374
           ++A S L   + L +G+Q+HAY          II   VA+           ++L +   R
Sbjct: 119 VTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D+V+WNT++S+  QN    E L  + EM  +G   D  T++++L A S+L     GK+ H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238

Query: 435 AYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           AY L++G   E   + S L+DMY     + + R++F+     DR    WNAMIAGY+QN 
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD--GMFDRKIGLWNAMIAGYSQNE 296

Query: 493 LLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
             +EA + F  M E   +  N  T+A V+PAC   G     + +HGF ++  LD++ FV 
Sbjct: 297 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 356

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM------ 605
            +L+DMYS+ G I+ A  +F K+ +++ VT+ TMI GY      E AL L   M      
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 416

Query: 606 --KGC---GIEPDAITFVAVLSACSYAGLVDEGLQI 636
             KG     ++P++IT + +L +C+    + +G +I
Sbjct: 417 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 452



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 292/629 (46%), Gaps = 77/629 (12%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           ++FD I+    V WN+ +I  +C+   +E A+  +  M   +   S  ++T  SV+ AC+
Sbjct: 67  KVFDRISERNQVSWNS-LISSLCSFEKWEMALEAFRCMLDENVEPS--SFTLVSVVTACS 123

Query: 119 ET---RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
                  L +GK VH + +R     + F+ N+L+ MY   L  L +  V           
Sbjct: 124 NLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGK-LGKLASSKV----------- 170

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 +  +   R++V WNT++S   + E+ +EA+   R M+  G+ P   +  +V PA
Sbjct: 171 ------LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA 224

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S L   ++   ++   +K GS   N  FV S+ + MY         R++FD   +R   
Sbjct: 225 CSHLEMLRTGKELHAYALKNGSLDENS-FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIG 283

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +WN MI GY QN H  EA+ LF+ + E   ++ +  T    + A  +       + +H +
Sbjct: 284 LWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 343

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
           ++K  +     V N ++                    +RD+V+WNTMI+ +V +   ++ 
Sbjct: 344 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 403

Query: 396 LMLVYEMQ-----------KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           L+L+++MQ           +     +S+T+  +L + + L     GK+ HAY +++ +  
Sbjct: 404 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 463

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + S L+DMYAK G ++ +R++F++     ++  TWN +I  Y  +G  +EA    R 
Sbjct: 464 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQ--KNVITWNVIIMAYGMHGNGQEAIDLLRM 521

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS------LIDM 557
           M+   V PN VT  SV  AC+  G ++      G  I Y++  +  V  S      ++D+
Sbjct: 522 MMVQGVKPNEVTFISVFAACSHSGMVD-----EGLRIFYVMKPDYGVEPSSDHYACVVDL 576

Query: 558 YSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQ-HGMSERALSLFRSMKGCGIEPD-A 614
             ++G I  A  +   +P   N     + +LG  + H   E  +    +     +EP+ A
Sbjct: 577 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE--IGEIAAQNLIQLEPNVA 634

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
             +V + +  S AGL D+  ++   M+++
Sbjct: 635 SHYVLLANIYSSAGLWDKATEVRRNMKEQ 663



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 244/541 (45%), Gaps = 63/541 (11%)

Query: 19  PPPPQL---PQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
           P P  L    Q+H+      +L +  I + ++   + G+   ++ L  S      V WNT
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 185

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           ++     N    EA+    +M         D +T SSVL AC+    LR GK +H + ++
Sbjct: 186 VLSSLCQNEQLLEALEYLREMVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243

Query: 136 CFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
             S + + FV ++L++MY  C   L                     +VFD M  R +  W
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGR------------------RVFDGMFDRKIGLW 285

Query: 195 NTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           N +++ Y + E   EA+  F  M    G+  ++ +   V PA    G +   + ++G +V
Sbjct: 286 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 345

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K G +   D FV ++ + MY+ LG  D A +IF    +R+   WNTMI GYV + H  +A
Sbjct: 346 KRGLD--RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 403

Query: 314 IELFVQVLELDEIVF----------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           + L  ++  L+  V           + +T ++ L + + L  L  G+++HAY IKN +A 
Sbjct: 404 LLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT 463

Query: 364 PVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            V V +A++                    +++V++WN +I A+  +G   E + L+  M 
Sbjct: 464 DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMM 523

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LIDMYAKSGL 460
            QG   + VT  ++ +A S+    D G +   Y+++     E    +   ++D+  ++G 
Sbjct: 524 VQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGR 582

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIAS 518
           IK A Q+             W++++     +  LE   +A + +  LE NV  + V +A+
Sbjct: 583 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 642

Query: 519 V 519
           +
Sbjct: 643 I 643



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 10/194 (5%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG--FSIRYLLDQNVFVGTSLIDMYSKS 561
           M+   + P+     ++L A   + ++ELGKQ+H   +   Y +D +V V  +L+++Y K 
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD-SVTVANTLVNLYRKC 59

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G       VF +I E+N V++ ++I         E AL  FR M    +EP + T V+V+
Sbjct: 60  GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV---ADMLGRVGKVVEAYEFVKELGE 678
           +ACS   +  EGL +   +   Y ++    +   +     M G++GK+  +   +   G 
Sbjct: 120 TACSNLPM-PEGLMMGKQVHA-YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG- 176

Query: 679 EGNVLEIWGSLLGS 692
            G  L  W ++L S
Sbjct: 177 -GRDLVTWNTVLSS 189


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 262/783 (33%), Positives = 414/783 (52%), Gaps = 57/783 (7%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPH-LARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+          P+IR+ L  +  + R    AR+L D  + P  V W+ +I G+  N 
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNG 136

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L   A++ + +M        C+ +T+SSVLKAC+  ++LRIGK VH   +        FV
Sbjct: 137 LGGGALMAFHEMHLLG--VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MY+ C   LD++                  ++FD +  RNVV+WN + S YV+ 
Sbjct: 195 ANTLVVMYAKCDEFLDSK------------------RLFDEIPERNVVSWNALFSCYVQX 236

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           +   EAV  F  M+  GI+P+  S  ++  A + L D     +++G L+KLG ++  D F
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW--DPF 294

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV---- 320
            A++ + MYA++G    A  +F+   + +   WN +I G V + H  +A+EL  Q+    
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQL 354

Query: 321 ------LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER 374
                 ++++  +F  V  +   S    L++  +           F  LP        E+
Sbjct: 355 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMA----------FNLLP--------EK 396

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D+++WN +IS + Q   D E L L  EM K+G   +  T++ +L + + L+   V +Q H
Sbjct: 397 DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 456

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
              ++ G H +  + + LID Y K   ++ A +IFE+   GD    ++ +MI  Y Q G 
Sbjct: 457 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDL--VSFTSMITAYAQYGQ 514

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA   F +M +  + P+    +S+L AC  +   E GKQLH   ++Y    ++F G S
Sbjct: 515 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 574

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L++MY+K G I+ A   F+++ E+  V+++ MI G  QHG   +AL LF  M   G+ P+
Sbjct: 575 LVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 634

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            IT V+VL AC++AGLV E    F+ M++ +  +P  EHY C+ D+LGR GK+ EA E V
Sbjct: 635 HITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELV 694

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
            ++  E N   +WG+LLG+ R+H   EL    A+ L  ++   S  G HVLL+NIYA  G
Sbjct: 695 NKMPFEANA-SVWGALLGAARIHKDVELGRRAAEMLFILEPEKS--GTHVLLANIYASAG 751

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            WENV +VR+ MR+  ++KE G SWI+V   V  F   D+ H +S +IY  L+ L+  M 
Sbjct: 752 KWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMD 811

Query: 794 NAG 796
            AG
Sbjct: 812 KAG 814



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 158/624 (25%), Positives = 293/624 (46%), Gaps = 74/624 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +YS +L  C  T++LR G  +H H  +   +    + N L+N+YS C             
Sbjct: 58  SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC------------- 104

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                  +    K+ D     ++V+W+ ++S Y +      A+  F  M  +G++ +  +
Sbjct: 105 -----RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFT 159

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A S + D +    V+G++V  G E   D+FVA++ + MYA+   F  ++++FD 
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFE--GDVFVANTLVVMYAKCDEFLDSKRLFDE 217

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERN   WN +   YVQ +   EA+ LF +++ L  I  ++ +  S ++A + L++   
Sbjct: 218 IPERNVVSWNALFSCYVQXDFCGEAVGLFYEMV-LSGIKPNEFSLSSMVNACTGLRDSSR 276

Query: 349 GQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           G+ +H Y+IK                      +A  + V   + + D+VSWN +I+  V 
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +   ++ L L+ +M+                           +Q H+ L++  +  +   
Sbjct: 337 HEHHEQALELLGQMK---------------------------RQLHSSLMKMDMESDLFV 369

Query: 449 SY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           S  L+DMY+K  L++ AR  F  N   ++D   WNA+I+GY+Q     EA   F +M + 
Sbjct: 370 SVGLVDMYSKCDLLEDARMAF--NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE 427

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            +  N  T++++L +   +  + + +Q+HG S++     +++V  SLID Y K   +  A
Sbjct: 428 GIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 487

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F +    + V++T+MI  Y Q+G  E AL LF  M+   ++PD     ++L+AC+  
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
              ++G Q+  +   +Y           + +M  + G + +A     EL E G V   W 
Sbjct: 548 SAFEQGKQL-HVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV--SWS 604

Query: 688 SLLGSCRLHGHSELAEVVAKKLLE 711
           +++G    HGH   A  +  ++L+
Sbjct: 605 AMIGGLAQHGHGRQALQLFNQMLK 628



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 162/305 (53%), Gaps = 12/305 (3%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           + K  F   SV+ + LLS     ++   G Q HA++ + G+  +  + ++LI++Y+K   
Sbjct: 47  IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRX 106

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
              AR++   ++S + D  +W+A+I+GY QNGL   A +AF +M    V  N  T +SVL
Sbjct: 107 FGYARKLV--DESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+ + ++ +GKQ+HG  +    + +VFV  +L+ MY+K      +  +F +IPE+N V
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD--EGLQIFD 638
           ++  +   Y Q      A+ LF  M   GI+P+  +  ++++AC+  GL D   G  I  
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHG 282

Query: 639 -LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
            L++  Y   P + +   + DM  +VG + +A    +++ +   V   W +++  C LH 
Sbjct: 283 YLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIKQPDIV--SWNAVIAGCVLHE 338

Query: 698 HSELA 702
           H E A
Sbjct: 339 HHEQA 343


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 265/763 (34%), Positives = 409/763 (53%), Gaps = 55/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +F  +    +  WN +I GF        A+L Y +M      T  D YT+  V+KAC
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCG--TLPDKYTFPYVIKAC 157

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               ++ +G+ VH            FV +SL+  YS      DA  +             
Sbjct: 158 GGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYL------------- 204

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD M  ++ V WN +++ YVK   +  A   F  M R    P++++F  V    +
Sbjct: 205 -----FDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++GL+V  G E   D  VA++ + MYA+ G    AR++FD   + +   W
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEM--DSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTW 317

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GYVQN    EA  LF +++    +  D +TF S L  +S+   L  G+++H YII
Sbjct: 318 NGMISGYVQNGFMDEASCLFHEMISA-RMKPDSITFSSFLPLLSEGATLRQGKEIHCYII 376

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +N V+L V + +A+I+                     D+V    MIS +V NG+++  L 
Sbjct: 377 RNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALE 436

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY----LID 453
           +   + ++    +SVT+ ++L A + L    +GK+ H ++L++G    G   Y    ++D
Sbjct: 437 IFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG---HGGSCYVGSAIMD 493

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G +  A Q F      D+D   WN+MI   +QNG  EEA   FRQM       + 
Sbjct: 494 MYAKCGRLDLAHQTFI--GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           V+I++ L AC  +  +  GK++H F +R     ++F  ++LIDMYSK G ++ A  VF  
Sbjct: 552 VSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDT 611

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + EKN V++ ++I  YG HG  + +L+LF  M G GI+PD +TF+A++SAC +AG VDEG
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 671

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  F  M +E  I    EHY C+ D+ GR G++ EA+  +  +    +   +WG+LLG+C
Sbjct: 672 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA-GVWGTLLGAC 730

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           RLHG+ ELAEV ++ L ++D +NS  GY+VLLSN++A  G WE+V K+R  M+ERG++K 
Sbjct: 731 RLHGNVELAEVASRNLFDLDPQNS--GYYVLLSNVHANAGQWESVLKIRSLMKERGVQKV 788

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            GCSWIDV    + F + D+ HPQS +IY +L+ L +E+R  G
Sbjct: 789 PGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEG 831



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 302/621 (48%), Gaps = 59/621 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G  H AR LFD +     V+WN ++ G+V N     A  ++ +M+++   T+ ++ T+
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE--TNPNSVTF 251

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + VL  CA    +  G  +H   +         V N+LL MY+ C    DA         
Sbjct: 252 ACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDAR-------- 303

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     ++FD M + ++V WN ++S YV+     EA   F  M+   ++P +I+F 
Sbjct: 304 ----------RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFS 353

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +  P LS     +    ++  +++ G     D+F+ S+ I +Y +    + ARKIFD   
Sbjct: 354 SFLPLLSEGATLRQGKEIHCYIIRNGVSL--DVFLKSALIDIYFKCRDVEMARKIFDQRT 411

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +  V   MI GYV N     A+E+F  +L+ + +  + VT  S L A + L  L LG+
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ-ERMRANSVTLASVLPACAGLAALTLGK 470

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           +LH +I+KN       V +A++                    ++D V WN+MI++  QNG
Sbjct: 471 ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNG 530

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ES 449
             +E + L  +M   G   D V+++A LSA +NL     GK+ HA+++R     +   ES
Sbjct: 531 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 590

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LIDMY+K G +  A ++F+  +  ++++ +WN++IA Y  +G L+++   F  ML   +
Sbjct: 591 ALIDMYSKCGNLDLACRVFDTME--EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 648

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVI 564
            P+ VT  +++ AC   G ++ G  +H F  R + ++   +        ++D++ ++G +
Sbjct: 649 QPDHVTFLAIISACGHAGQVDEG--IHYF--RCMTEELGIMARMEHYACMVDLFGRAGRL 704

Query: 565 NYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           N A  +   +P   ++  + T++     HG  E A    R++    ++P    +  +LS 
Sbjct: 705 NEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF--DLDPQNSGYYVLLSN 762

Query: 624 C-SYAGLVDEGLQIFDLMQQE 643
             + AG  +  L+I  LM++ 
Sbjct: 763 VHANAGQWESVLKIRSLMKER 783



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 227/493 (46%), Gaps = 46/493 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           ++ +P   + L+   + G    AR+LFD + +   V WN +I G+V N    EA  L+ +
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M   S     D+ T+SS L   +E   LR GK +HC+ IR   +   F+ ++L+++Y  C
Sbjct: 340 MI--SARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKC 397

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
               D EM                 K+FD     ++V    ++S YV       A+  FR
Sbjct: 398 ---RDVEMAR---------------KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFR 439

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            +L+  +R ++++  +V PA + L        ++G ++K G  +    +V S+ + MYA+
Sbjct: 440 WLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG--HGGSCYVGSAIMDMYAK 497

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  D A + F    +++   WN+MI    QN  P EAI+LF Q + +    +D V+  +
Sbjct: 498 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ-MGMAGTKYDCVSISA 556

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNF--------------------VALPVIVLNAVIERD 375
           ALSA + L  L  G+++HA++++                      + L   V + + E++
Sbjct: 557 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKN 616

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSWN++I+A+  +G   + L L + M   G   D VT  A++SA  +    D G     
Sbjct: 617 EVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFR 676

Query: 436 YLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            +         ME Y  ++D++ ++G +  A  +         D   W  ++     +G 
Sbjct: 677 CMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPF-SPDAGVWGTLLGACRLHGN 735

Query: 494 LEEAFVAFRQMLE 506
           +E A VA R + +
Sbjct: 736 VELAEVASRNLFD 748



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 214/456 (46%), Gaps = 35/456 (7%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY   G F  A+ IF       +E WN MI G+        A+  + ++L    +  D  
Sbjct: 90  MYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLP-DKY 148

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------ 373
           TF   + A   L  + LG+ +H  I      L V V +++I+                  
Sbjct: 149 TFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRM 208

Query: 374 --RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             +D V WN M++ +V+NG  D    +  EM++     +SVT   +LS  ++    + G 
Sbjct: 209 PSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGS 268

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H  ++  G+  +  + + L+ MYAK G +  AR++F+       D  TWN MI+GY Q
Sbjct: 269 QLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK--TDLVTWNGMISGYVQ 326

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG ++EA   F +M+   + P+ +T +S LP  +    +  GK++H + IR  +  +VF+
Sbjct: 327 NGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFL 386

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            ++LID+Y K   +  A  +F +    + V  T MI GY  +GM+  AL +FR +    +
Sbjct: 387 KSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKV 666
             +++T  +VL AC+    +  G ++       + ++      C V     DM  + G++
Sbjct: 447 RANSVTLASVLPACAGLAALTLGKEL-----HGHILKNGHGGSCYVGSAIMDMYAKCGRL 501

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             A++    + ++  V   W S++ SC  +G  E A
Sbjct: 502 DLAHQTFIGISDKDAV--CWNSMITSCSQNGKPEEA 535



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 124/229 (54%), Gaps = 5/229 (2%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           + ++L   ++      G+Q HA +L +GI + G + + L+ MY   G    A+ IF +  
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
               +   WN MI G+T  G  + A + + +ML     P+  T   V+ AC  + ++ LG
Sbjct: 109 LWCSE--PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 533 KQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           + +H   I+++  + +VFVG+SLI  YS++G I+ A  +F ++P K+ V +  M+ GY +
Sbjct: 167 RVVHD-KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           +G  + A  +F  M+     P+++TF  VLS C+   +++ G Q+  L+
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLV 274



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 58/135 (42%)

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           HN       + S+L  C     +  G+Q H   +   +  N  +GT L+ MY   G    
Sbjct: 40  HNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A N+F ++    S  +  MI G+   G  + AL  +  M GCG  PD  TF  V+ AC  
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGG 159

Query: 627 AGLVDEGLQIFDLMQ 641
              V  G  + D +Q
Sbjct: 160 LNSVALGRVVHDKIQ 174


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 251/770 (32%), Positives = 420/770 (54%), Gaps = 56/770 (7%)

Query: 57  LARQLFDSIT---------RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           LAR+  D++            +++ WN +I GF      + A+L Y +M       S D 
Sbjct: 82  LARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDA 141

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +T   V+K+CA    + +G+ VH            +V ++L+ MY+      DA ++G  
Sbjct: 142 HTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYA------DAGLLGNA 195

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                          FD +  R+ V WN ++   +K      AVR FR M   G  P+  
Sbjct: 196 R------------DAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFA 243

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +        ++  D  S   ++ L VK G E   ++ VA++ + MYA+  C D A ++F+
Sbjct: 244 TLACFLSVCATDADLLSGAQLHSLAVKCGLE--PEVAVANTLLAMYAKCQCLDDAWRLFE 301

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              + +   WN MI G VQN   VEA  LF   ++      D +T +S L A++ L  L 
Sbjct: 302 LMPQDDLVTWNGMISGCVQNGLFVEAFGLFYD-MQRSGARPDSITLVSLLPALTDLNGLK 360

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFV 387
            G+++H YI++N V + V +++A+++                     DVV  +TMIS +V
Sbjct: 361 QGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYV 420

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
            NG+ +E L +   + +Q    ++VT+ ++L   +++    +G+Q H Y+LR+    +  
Sbjct: 421 LNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCY 480

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +ES L+DMYAK G +  +  IF K     +D+ TWN+MI+ ++QNG  +EA   FRQM  
Sbjct: 481 VESALMDMYAKCGRLDLSHYIFLK--MSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCM 538

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             +  N +TI++ L AC  +  I  GK++HG +I+  +  ++F  ++LIDMY+K G +  
Sbjct: 539 EGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLEL 598

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF  +P+KN V++ ++I  YG HG+ + ++SL   M+  G +PD +TF+A++SAC++
Sbjct: 599 ALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAH 658

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV+EG+Q+F  M ++Y I P  EH+ C+ D+  R GK+ +A +F+ ++  + +   IW
Sbjct: 659 AGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDA-GIW 717

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
           G+LL +CR+H + ELA++ +++L ++D  NS  GY+VL+SNI A  G W+ V KVR+ M+
Sbjct: 718 GALLHACRVHRNVELADIASQELFKLDPANS--GYYVLMSNINAVAGRWDGVSKVRRLMK 775

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +  + K  G SW+DV    + F + D+ HP+S  IY  L+ L  E+R  G
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEG 825



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 38/381 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C++ R  +A+ L+D+      VI +T+I G+V N +  EA+ ++  + +       +  T
Sbjct: 391 CRDVR--MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQC--IKPNAVT 446

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +SVL  CA    L +G+ +H + +R       +V ++L++MY+ C              
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKC-------------- 492

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                + DL   +F  M +++ V WN+++S + +  +  EA+  FR M   GI+ + I+ 
Sbjct: 493 ----GRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
                A +SL        ++G+ +K       D+F  S+ I MYA+ G  + A ++F+  
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIK--GPIKADIFAESALIDMYAKCGNLELALRVFEFM 606

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ++N   WN++I  Y  +    E++ L   + E +    D VTFL+ +SA +    ++ G
Sbjct: 607 PDKNEVSWNSIISAYGAHGLVKESVSLLHGMQE-EGYKPDHVTFLALISACAHAGLVEEG 665

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            QL   + K ++  P           +  +  M+  + ++G  D+ +  + +M    F  
Sbjct: 666 VQLFQCMTKKYLIAP----------RMEHFACMVDLYSRSGKLDKAIQFIADMP---FKP 712

Query: 410 DSVTVTALLSAASNLRNQDVG 430
           D+    ALL A    RN ++ 
Sbjct: 713 DAGIWGALLHACRVHRNVELA 733


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/765 (33%), Positives = 416/765 (54%), Gaps = 50/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + A+Q+FD +       WN ++ G+V +    EA  L+ QM +       D YT+  
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDG--VKPDKYTFVY 210

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L ACA+ +N+  G  +    +    +   FV  +L+NM+  C    DA           
Sbjct: 211 MLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDA----------- 259

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVF+ + RR+++ W ++++   +  ++ +A   F++M   G++P  ++FV++
Sbjct: 260 -------LKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +     +    V+  + ++G +   +++V ++ + MY + G  + A ++F+    R
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLD--TEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  MI G+ Q+    EA   F +++E   I  + VTF+S L A S+   L  G+Q+
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIE-SGIEPNRVTFMSILGACSRPSALKQGRQI 429

Query: 353 H------AYIIKNFVALPVIVLNA----------VIER----DVVSWNTMISAFVQNGLD 392
           H       YI  + V   ++ + A          V ER    +VV+WN MI+A+VQ+   
Sbjct: 430 HDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKY 489

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           D  +     + K+G   DS T T++L+   +    ++GK   + ++R G   +  + + L
Sbjct: 490 DNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNAL 549

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + M+   G + +A  +F  ND  +RD  +WN +IAG+ Q+G  + AF  F+ M E  V P
Sbjct: 550 VSMFVNCGDLMSAMNLF--NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKP 607

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + +T   +L AC     +  G++LH       LD +V VGT LI MY+K G I+ A  VF
Sbjct: 608 DQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVF 667

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +P+KN  ++T+MI GY QHG  + AL LF  M+  G++PD ITFV  LSAC++AGL+ 
Sbjct: 668 HNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIK 727

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL  F+ M +++ I+P  EHY C+ D+ GR G + EA EF+ ++  + +   +WG+LLG
Sbjct: 728 EGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDS-RLWGALLG 785

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C++H   ELAE VA+K LE+D  +   G +V+LSNIYA  G W+ V K+RK M +RG+ 
Sbjct: 786 ACQVHLDVELAEKVAQKKLELDPNDD--GVYVILSNIYAAAGMWKEVTKMRKVMLDRGVV 843

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K+ G SWI+V G V+ F S D+ HPQ  +I+  L RL MEM+  G
Sbjct: 844 KKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLG 888



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 294/576 (51%), Gaps = 46/576 (7%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA+L+   +   SP+      TYSS+L+ C + +NL  G+ +H H       P  F++N 
Sbjct: 87  EAMLVL--LSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNM 144

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L++MY+ C ++  A+                  ++FD M  ++V +WN ++  YV+  RY
Sbjct: 145 LISMYAKCGNTNSAK------------------QIFDEMPDKDVYSWNLLLGGYVQHRRY 186

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
            EA R    M++ G++P   +FV +  A +   +      ++ L++  G  +  DLFV +
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAG--WDTDLFVGT 244

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + I M+ + G  D A K+F+N   R+   W +MI G  ++    +A  LF QV+E + + 
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLF-QVMEEEGVQ 303

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHA-----------YIIKNFVAL---------PVIV 367
            D V F+S L A +  + L+ G+++HA           Y+    +++          + V
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
            N V  R+VVSW  MI+ F Q+G  +E  +   +M + G   + VT  ++L A S     
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423

Query: 428 DVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             G+Q H  +++ G I  + + + L+ MYAK G +  AR +FE+     ++   WNAMI 
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER--ISKQNVVAWNAMIT 481

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
            Y Q+   + A   F+ +L+  + P+  T  S+L  C     +ELGK +    IR   + 
Sbjct: 482 AYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFES 541

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           ++ +  +L+ M+   G +  A N+F  +PE++ V++ T+I G+ QHG ++ A   F+ M+
Sbjct: 542 DLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQ 601

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             G++PD ITF  +L+AC+    + EG ++  L+ +
Sbjct: 602 ESGVKPDQITFTGLLNACASPEALTEGRRLHALITE 637



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 238/464 (51%), Gaps = 31/464 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+F+ +  I MYA+ G  + A++IFD   +++   WN ++GGYVQ+    EA  L  Q++
Sbjct: 138 DIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------- 366
           + D +  D  TF+  L+A +  + +D G +L + I+        FV   +I         
Sbjct: 198 Q-DGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGV 256

Query: 367 -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                V N +  RD+++W +MI+   ++    +   L   M+++G   D V   +LL A 
Sbjct: 257 DDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKAC 316

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           ++    + GK+ HA +   G+  E  + + L+ MY K G ++ A ++F  N    R+  +
Sbjct: 317 NHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF--NLVKGRNVVS 374

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           W AMIAG+ Q+G +EEAF+ F +M+E  + PN VT  S+L AC+    ++ G+Q+H   I
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434

Query: 541 R--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           +  Y+ D    V T+L+ MY+K G +  A NVF +I ++N V +  MI  Y QH   + A
Sbjct: 435 KAGYITDDR--VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNA 492

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           ++ F+++   GI+PD+ TF ++L+ C     ++ G  +  L+ +    +        +  
Sbjct: 493 VATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVS 551

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           M    G ++ A     ++ E    L  W +++     HG ++ A
Sbjct: 552 MFVNCGDLMSAMNLFNDMPERD--LVSWNTIIAGFVQHGENQFA 593



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 85/159 (53%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NA +   ++ G L EA +    +   ++  +  T +S+L  C    N+  G+++H     
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             +  ++F+   LI MY+K G  N A  +F ++P+K+  ++  ++ GY QH   E A  L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
              M   G++PD  TFV +L+AC+ A  VD+G ++F L+
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLI 231


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 256/765 (33%), Positives = 415/765 (54%), Gaps = 54/765 (7%)

Query: 58  ARQLFDSITRP---TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +F ++ R    +++ WN +I GF        A+L Y +M       S D +T   V+
Sbjct: 89  AVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVV 148

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K+CA    + +G+ VH            +V ++L+ MYS      DA             
Sbjct: 149 KSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDAR------------ 196

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                   FD M  R+ V WN ++  Y+K      AVR FR M   G  P+  +      
Sbjct: 197 ------DAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLS 250

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             ++  D  S   ++ L VK G E   ++ VA++ + MYA+  C D A ++F+     + 
Sbjct: 251 VCAAEADLLSGVQLHSLAVKCGLE--QEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDL 308

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI G VQN    EA+ LF  +L       D VT +S L A++ L  L  G+++H 
Sbjct: 309 VTWNGMISGCVQNGLLDEALGLFCDMLR-SGARPDSVTLVSLLPALTDLNGLKQGKEVHG 367

Query: 355 YIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDE 394
           YII+N V +   +++A+++                     DVV  +T+IS +V NG+ ++
Sbjct: 368 YIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEK 427

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYL 451
            L +   + +Q    ++VTV ++L A +++    +G++ H Y+LR+   +EG   +ES L
Sbjct: 428 ALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNA--YEGKCYVESAL 485

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAK G +  +  IF K     +D+ TWN+MI+ ++QNG  +EA   FRQM    +  
Sbjct: 486 MDMYAKCGRLDLSHYIFSKMSL--KDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N VTI+S L AC  +  I  GK++HG  I+  +  ++F  ++LIDMY+K G +  A  VF
Sbjct: 544 NNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVF 603

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +P+KN V++ ++I  YG HG+ + ++S    M+  G +PD +TF+A++SAC++AGLV+
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVE 663

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGLQ+F  M +EY I P  EH+ C+ D+  R G++ +A +F+ ++  + +   IWG+LL 
Sbjct: 664 EGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDA-GIWGALLH 722

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+H + ELA++ +++L ++D  NS  GY+VL+SNI A  G W+ V KVR+ M++  + 
Sbjct: 723 ACRVHRNVELADIASQELFKLDPGNS--GYYVLMSNINAVAGRWDGVSKVRRLMKDNKIL 780

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  G SW+DV    + F + D+ HP+S  IY  L+ L  E+R  G
Sbjct: 781 KIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEG 825



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  L+  +F  ++    V WN++I  F  N  P EA+ L+ QM         +N T SS
Sbjct: 493 GRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEG--IKYNNVTISS 550

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L ACA    +  GK +H   I+       F  ++L++MY+ C                 
Sbjct: 551 ALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKC----------------- 593

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               +L  +VF+ M  +N V+WN+I+S Y       E+V     M   G +P  ++F+ +
Sbjct: 594 -GNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLAL 652

Query: 233 FPALSSLG 240
             A +  G
Sbjct: 653 ISACAHAG 660


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 241/744 (32%), Positives = 412/744 (55%), Gaps = 79/744 (10%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIR----CFSNPSRFVYNSLLNMYSTCLSSL 159
           S DN+ + +VLKA A  + L +GK +H H  +     FS+ +  + N+L+NMY  C    
Sbjct: 7   SPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVT--IDNTLVNMYGKCGGLG 64

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           DA                   KVFD +  R+ V+WN+I+S   + E +  A++ FR+ML 
Sbjct: 65  DAY------------------KVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLM 106

Query: 220 MGIRPSTISFVNVFPALSSLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
            G  PS+ + V++  A S+L           ++G   + G       F  ++ + MYA+L
Sbjct: 107 EGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT---FSNNALMAMYAKL 163

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  D A+ +     +R+   WN+MI  + QN   +EA+ +F++++ L+ +  D VTF S 
Sbjct: 164 GRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASV 222

Query: 337 LSAVSQLQELDLGQQLHAYIIK-------NFVALPVI--------------VLNAVIERD 375
           L A S L  L  G+++HAY ++       +FV   ++              V ++V++R 
Sbjct: 223 LPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRK 282

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           +  WN MI+ + Q+  D++ LML  EM+   G   ++ T+++++ A          +  H
Sbjct: 283 IGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIH 342

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            Y+++ G+     +++ LIDMY++ G IKT+++IF+  +  DRD  +WN +I  Y   G 
Sbjct: 343 GYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSME--DRDIVSWNTIITSYVICGR 400

Query: 494 LEEAFVAFRQM--LEHNVT--------------PNVVTIASVLPACNPMGNIELGKQLHG 537
             +A +   +M  +E   T              PN +T+ +VLP C  +  +  GK++H 
Sbjct: 401 SSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
           ++IR LL   V VG++L+DMY+K G +N A  VF ++P +N +T+  +I+ YG HG  + 
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE 520

Query: 598 ALSLFRSM-----KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           +L LF  M     KG  ++P  +TF+A+ ++CS++G+VDEGL +F  M+ E+ I+P+ +H
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDH 580

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D++GR GKV EAY  V  +    + +  W SLLG+CR++ + E+ E+ A+ LL++
Sbjct: 581 YACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQL 640

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
             +  +  ++VLLSNIY+  G W+    +R+ M+  G++KE GCSWI+ G  V++F + D
Sbjct: 641 --QPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGD 698

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
             HPQS K+++ LE L+  ++  G
Sbjct: 699 LSHPQSEKLHDFLETLSERLKKEG 722



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 167/640 (26%), Positives = 306/640 (47%), Gaps = 89/640 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A ++FD IT    V WN+II   +C    +E AI  +  M       S  ++T  S+  A
Sbjct: 66  AYKVFDRITERDQVSWNSIISA-LCRFEEWEVAIKAFRLMLMEGFEPS--SFTLVSMALA 122

Query: 117 CAETR---NLRIGKAVH-CHF----IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           C+  R    L +GK +H C F     R FSN      N+L+ MY+             K 
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN------NALMAMYA-------------KL 163

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
             +D +K  LV  +F+    R++V WN+++S + + ER++EA+   R+M+  G++P  ++
Sbjct: 164 GRLDDAKSLLV--LFED---RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVT 218

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V PA S L   ++   ++   ++   + + + FV S+ + MY   G  +  R +FD+
Sbjct: 219 FASVLPACSHLDLLRTGKEIHAYALRT-DDVIENSFVGSALVDMYCNCGQVESGRLVFDS 277

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            L+R   +WN MI GY Q+ H  +A+ LF+++     +  +  T  S + A  + + +  
Sbjct: 278 VLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR 337

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
            + +H Y+IK  +     + NA+I                    +RD+VSWNT+I+++V 
Sbjct: 338 KEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVI 397

Query: 389 NGLDDEGLMLVYEMQK-------QG---------FMIDSVTVTALLSAASNLRNQDVGKQ 432
            G   + L+L++EMQ+        G         F  +S+T+  +L   ++L     GK+
Sbjct: 398 CGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE 457

Query: 433 THAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            HAY +R+ +  +  + S L+DMYAK G +  AR++F++     R+  TWN +I  Y  +
Sbjct: 458 IHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI--RNVITWNVIIMAYGMH 515

Query: 492 GLLEEAFVAFRQMLEHN-----VTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLD 545
           G  +E+   F  M+        V P  VT  ++  +C+  G ++ G  L H     + ++
Sbjct: 516 GKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIE 575

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQ--HGMSERALSLF 602
                   ++D+  ++G +  A  +   +P   + V   + +LG  +  H +    ++  
Sbjct: 576 PAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAE 635

Query: 603 RSMKGCGIEPDAITFVAVLSAC-SYAGLVDEGLQIFDLMQ 641
             ++   ++PD  +   +LS   S AGL D+ + +   M+
Sbjct: 636 NLLQ---LQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMK 672



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 44/461 (9%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M+  G  P   +F  V  A++ + +      ++  + K G    + + + ++ + MY + 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    A K+FD   ER+   WN++I    +      AI+ F +++ ++       T +S 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAF-RLMLMEGFEPSSFTLVSM 119

Query: 337 LSAVSQLQELD---LGQQLHAYIIKN-----FVALPVIVLNAVI--------------ER 374
             A S L++ D   LG+Q+H    +      F    ++ + A +              +R
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D+V+WN+MIS+F QN    E LM +  M  +G   D VT  ++L A S+L     GK+ H
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 435 AYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           AY LR     E   + S L+DMY   G +++ R +F+     DR    WNAMIAGY Q+ 
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDS--VLDRKIGLWNAMIAGYAQSE 297

Query: 493 LLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
             E+A + F +M     +  N  T++S++PA      I   + +HG+ I+  L+ N ++ 
Sbjct: 298 HDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQ 357

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM------ 605
            +LIDMYS+ G I  +  +F  + +++ V++ T+I  Y   G S  AL L   M      
Sbjct: 358 NALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEK 417

Query: 606 ----------KGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
                     K    +P++IT + VL  C+    + +G +I
Sbjct: 418 STYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEI 458



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 154/323 (47%), Gaps = 41/323 (12%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C  G+    R +FDS+      +WN +I G+  +    +A++L+ +M+ ++   S +  T
Sbjct: 263 CNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYS-NATT 321

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            SS++ A      +   + +H + I+     +R++ N+L++MYS             +  
Sbjct: 322 MSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYS-------------RMG 368

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-------- 221
           ++  SK     ++FD+M  R++V+WNTI++ YV   R  +A+     M R+         
Sbjct: 369 DIKTSK-----RIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGD 423

Query: 222 --------IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
                    +P++I+ + V P  +SL        ++   ++  +   + + V S+ + MY
Sbjct: 424 YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIR--NLLASQVTVGSALVDMY 481

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL----ELDEIVFD 329
           A+ GC + AR++FD    RN   WN +I  Y  +    E++ELF  ++    +  E+   
Sbjct: 482 AKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPT 541

Query: 330 DVTFLSALSAVSQLQELDLGQQL 352
           +VTF++  ++ S    +D G  L
Sbjct: 542 EVTFIALFASCSHSGMVDEGLSL 564


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 257/830 (30%), Positives = 440/830 (53%), Gaps = 97/830 (11%)

Query: 25  PQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSIT---------RPTTVI--- 72
           P   + S P P    P  R +         P+L R    S+T          P+  I   
Sbjct: 4   PLAFTFSLPFPSQPLPFSRQK--------HPYLLRATPTSVTDDVASTVYGAPSKFISQS 55

Query: 73  -----WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
                W  ++   V +NL  EA+L Y  M         DN+ + ++LKA A+ +++ +GK
Sbjct: 56  HSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLG--IKPDNFAFPALLKAVADLQDMDLGK 113

Query: 128 AVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
            +H H  +  +   S  V N+L+N+Y  C                    +  V KVFD +
Sbjct: 114 QIHAHVYKFGYGVDSVTVANTLVNLYRKC------------------GDFGAVYKVFDRI 155

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL----GDY 242
             RN V+WN+++S     E++  A+  FR ML   + PS+ + V+V  A S+     G  
Sbjct: 156 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL 215

Query: 243 KSADV-VYGLLV-KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
               V  YGL   +L S      F+ ++ + MY ++G    ++ +  +   R+   WNT+
Sbjct: 216 MGKQVHAYGLRKGELNS------FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTV 269

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           +    QN   +EA+E +++ + L+ +  D  T  S L A S L+ L  G++LHAY +KN 
Sbjct: 270 LSSLCQNEQFLEALE-YLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNG 328

Query: 360 ------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                 FV   ++              V + + +R +  WN MI+ + QN  D+E L+L 
Sbjct: 329 SLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLF 388

Query: 400 YEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAK 457
            EM++  G + +S T+  ++ A          +  H ++++ G+  +  +++ L+DMY++
Sbjct: 389 IEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSR 448

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVT----- 510
            G I  A++IF K +  DRD  TWN +I GY  +   E+A +   +M  LE   +     
Sbjct: 449 LGKIDIAKRIFGKME--DRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASR 506

Query: 511 ----PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
               PN +T+ ++LP+C  +  +  GK++H ++I+  L  +V VG++L+DMY+K G +  
Sbjct: 507 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 566

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  VF +IP +N +T+  +++ YG HG S+ A+ + R M   G++P+ +TF++V +ACS+
Sbjct: 567 SRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSH 626

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +G+V+EGL+IF  M+++Y ++PS++HY CV D+LGR G+V EAY+ +  +    +    W
Sbjct: 627 SGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAW 686

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            SLLG+CR+H + E+ E+ A+ L++++   ++  ++VLL+NIY+  G W    +VR+ M+
Sbjct: 687 SSLLGACRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLWYKATEVRRNMK 744

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +G+RKE GCSWI+ G  V++F + D  HPQS K+   LE L   MR  G
Sbjct: 745 AQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEG 794


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/760 (33%), Positives = 410/760 (53%), Gaps = 49/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LF ++    T  WN +I GF        A+L Y +M  +    S D YT+  V+KAC
Sbjct: 11  AKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG--VSPDKYTFPYVVKAC 68

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              +++++GK VH            FV +SL+ +Y+      DA+ +             
Sbjct: 69  CGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL------------- 115

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD + +++ V WN +++ YVK      A++ F  M    I+P++++F  V    +
Sbjct: 116 -----FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCA 170

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++G+ V  G E   D  VA++ + MY++  C   ARK+FD   + +   W
Sbjct: 171 SEAMLDLGTQLHGIAVSCGLEL--DSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSW 228

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I GYVQN    EA  LF  ++    I  D +TF S L  V++L  L   +++H YII
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAG-IKPDSITFASFLPCVNELLSLKHCKEIHGYII 287

Query: 358 KNFVALPVIVLNAVIE-----RDV---------------VSWNTMISAFVQNGLDDEGLM 397
           ++ V L V + +A+I+     RDV               V   TMIS +V NG + E L 
Sbjct: 288 RHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALE 347

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               + ++     SVT +++  A + L   ++GK+ H  +++  +  +  + S ++DMYA
Sbjct: 348 AFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA 407

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +  A ++F  N   ++D   WN+MI   +QNG   EA   FRQM       + V+I
Sbjct: 408 KCGRLDLACRVF--NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSI 465

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           +  L AC  +  +  GK++HG  I+  L  +++  +SLIDMY+K G +N++  VF ++ E
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQE 525

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ ++I  YG HG  +  L+LF  M   GI+PD +TF+ ++SAC +AG VDEG++ 
Sbjct: 526 RNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           + LM +EY I    EHY CVADM GR G++ EA+E +  +    +   +WG+LLG+C +H
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDA-GVWGTLLGACHIH 644

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+ ELAEV +K L ++D  NS  GY+VLL+N+ A  G W  V KVR  M+ERG+RK  G 
Sbjct: 645 GNVELAEVASKHLFDLDPLNS--GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGY 702

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V    + F + D  HP + +IY +L+ L +E++  G
Sbjct: 703 SWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 163/571 (28%), Positives = 280/571 (49%), Gaps = 48/571 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    A+ LFD+I +  +V+WN ++ G+V N     AI ++ +M+ S      ++ T+
Sbjct: 105 ENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE--IKPNSVTF 162

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + VL  CA    L +G  +H   + C       V N+LL MYS C     A         
Sbjct: 163 ACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAAR-------- 214

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     K+FDT  + ++V+WN I+S YV+     EA   FR M+  GI+P +I+F 
Sbjct: 215 ----------KLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +  P ++ L   K    ++G +++     V D+F+ S+ I +Y +    + A+KI     
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIR--HAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSS 322

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +T V  TMI GYV N    EA+E F  +++ + +    VTF S   A + L  L+LG+
Sbjct: 323 SFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAFAGLAALNLGK 381

Query: 351 QLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           +LH  IIK                      + L   V N + E+D + WN+MI++  QNG
Sbjct: 382 ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNG 441

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              E + L  +M  +G   D V+++  LSA +NL     GK+ H  +++  +  +   ES
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAES 501

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LIDMYAK G +  +R++F++    +R++ +WN++I+ Y  +G L+E    F +ML + +
Sbjct: 502 SLIDMYAKCGNLNFSRRVFDRMQ--ERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559

Query: 510 TPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            P+ VT   ++ AC   G ++ G +  H  +  Y +   +     + DM+ ++G ++ A 
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAF 619

Query: 569 NVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
                +P   ++  + T++     HG  E A
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELA 650



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 217/447 (48%), Gaps = 27/447 (6%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY   G    A+ +F       T  WN MI G+        A+  ++++L    +  D  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG-VSPDKY 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYI----IKN--FVALPVIVLNA--------------V 371
           TF   + A   L+ + +G+ +H  +    +K   FV   +I L A              +
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ++D V WN M++ +V+NG     + +  EM+      +SVT   +LS  ++    D+G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H   +  G+  +  + + L+ MY+K   ++ AR++F+   S   D  +WN +I+GY Q
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDT--SPQSDLVSWNGIISGYVQ 237

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NGL+ EA   FR M+   + P+ +T AS LP  N + +++  K++HG+ IR+ +  +VF+
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            ++LID+Y K   +  A  +  +    ++V  TTMI GY  +G ++ AL  FR +    +
Sbjct: 298 KSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           +P ++TF ++  A +    ++ G ++   + +  K+         + DM  + G++  A 
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHG 697
                + E+  +   W S++ SC  +G
Sbjct: 417 RVFNRITEKDAI--CWNSMITSCSQNG 441


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 259/760 (34%), Positives = 410/760 (53%), Gaps = 49/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LF ++    T  WN +I GF        A+L Y +M  +    S D YT+  V+KAC
Sbjct: 11  AKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG--VSPDKYTFPYVVKAC 68

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              +++++GK VH            FV +SL+ +Y+      DA+ +             
Sbjct: 69  CGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYL------------- 115

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD + +++ V WN +++ YVK      A++ F  M    I+P++++F  V    +
Sbjct: 116 -----FDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCA 170

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++G+ V  G E   D  VA++ + MY++  C   ARK+FD   + +   W
Sbjct: 171 SEAMLDLGTQLHGIAVGCGLEL--DSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSW 228

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I GYVQN    EA  LF  ++    I  D +TF S L  V++L  L   +++H YII
Sbjct: 229 NGIISGYVQNGLMGEAEHLFRGMISAG-IKPDSITFASFLPCVNELLSLKHCKEIHGYII 287

Query: 358 KNFVALPVIVLNAVIE-----RDV---------------VSWNTMISAFVQNGLDDEGLM 397
           ++ V L V + +A+I+     RDV               V   TMIS +V NG + E L 
Sbjct: 288 RHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALE 347

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               + ++     SVT +++  A + L   ++GK+ H  +++  +  +  + S ++DMYA
Sbjct: 348 AFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYA 407

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +  A ++F  N   ++D   WN+MI   +QNG   EA   FRQM       + V+I
Sbjct: 408 KCGRLDLACRVF--NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSI 465

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           +  L AC  +  +  GK++HG  I+  L  +++  +SLIDMY+K G +N++  VF ++ E
Sbjct: 466 SGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQE 525

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN V++ ++I  YG HG  +  L+LF  M   GI+PD +TF+ ++SAC +AG VDEG++ 
Sbjct: 526 KNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           + LM +EY I    EHY CVADM GR G++ EA+E +  +    +   +WG+LLG+C +H
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDA-GVWGTLLGACHIH 644

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+ ELAEV +K L ++D  NS  GY+VLL+N+ A  G W  V KVR  M+ERG+RK  G 
Sbjct: 645 GNVELAEVASKHLFDLDPLNS--GYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGY 702

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V    + F + D  HP + +IY +L+ L +E++  G
Sbjct: 703 SWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 280/571 (49%), Gaps = 48/571 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    A+ LFD+I +  +V+WN ++ G+V N     AI ++ +M+ S      ++ T+
Sbjct: 105 ENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSE--IKPNSVTF 162

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + VL  CA    L +G  +H   + C       V N+LL MYS C     A         
Sbjct: 163 ACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAAR-------- 214

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     K+FDT+ + ++V+WN I+S YV+     EA   FR M+  GI+P +I+F 
Sbjct: 215 ----------KLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFA 264

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +  P ++ L   K    ++G +++     V D+F+ S+ I +Y +    + A+K      
Sbjct: 265 SFLPCVNELLSLKHCKEIHGYIIR--HAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSS 322

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +T V  TMI GYV N    EA+E F  +++ + +    VTF S   A + L  L+LG+
Sbjct: 323 SFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERMKPTSVTFSSIFPAFAGLAALNLGK 381

Query: 351 QLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           +LH  IIK                      + L   V N + E+D + WN+MI++  QNG
Sbjct: 382 ELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNG 441

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              E + L  +M  +G   D V+++  LSA +NL     GK+ H  +++  +  +   ES
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAES 501

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LIDMYAK G +  +R++F++    ++++ +WN++I+ Y  +G L+E    F +ML + +
Sbjct: 502 SLIDMYAKCGNLNFSRRVFDRMQ--EKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559

Query: 510 TPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            P+ VT   ++ AC   G ++ G +  H  +  Y +   +     + DM+ ++G ++ A 
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAF 619

Query: 569 NVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
                +P   ++  + T++     HG  E A
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELA 650



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 215/447 (48%), Gaps = 27/447 (6%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY   G    A+ +F       T  WN MI G+        A+  ++++L    +  D  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAG-VSPDKY 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYI----IKN--FVALPVIVLNA--------------V 371
           TF   + A   L+ + +G+ +H  +    +K   FV   +I L A              +
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ++D V WN M++ +V+NG     + +  EM+      +SVT   +LS  ++    D+G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H   +  G+  +  + + L+ MY+K   ++ AR++F+       D  +WN +I+GY Q
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLP--QSDLVSWNGIISGYVQ 237

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NGL+ EA   FR M+   + P+ +T AS LP  N + +++  K++HG+ IR+ +  +VF+
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFL 297

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            ++LID+Y K   +  A     +    ++V  TTMI GY  +G ++ AL  FR +    +
Sbjct: 298 KSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           +P ++TF ++  A +    ++ G ++   + +  K+         + DM  + G++  A 
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHG 697
                + E+  +   W S++ SC  +G
Sbjct: 417 RVFNRITEKDAI--CWNSMITSCSQNG 441


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/765 (33%), Positives = 413/765 (53%), Gaps = 54/765 (7%)

Query: 58  ARQLFDSITRPTTVI---WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +F S+ R        WN +I G         A+L Y +M         D++T+  V+
Sbjct: 94  AVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVV 153

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K+CA    + +G+ VH        +   FV ++L+ MY+      DA             
Sbjct: 154 KSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDAR------------ 201

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD M  R+ V WN ++  YVK      AV  F  M   G  P+  +      
Sbjct: 202 ------QVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             ++  D      ++ L VK G E  +++ VA++ + MYA+  C D   K+F      + 
Sbjct: 256 VSATESDLFFGVQLHTLAVKYGLE--SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI G VQN    +A+ LF   ++   I  D VT +S L A++ L   + G++LH 
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCD-MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHG 372

Query: 355 YIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDE 394
           YI++N V + V +++A+++                     DVV  +TMIS +V NG+  E
Sbjct: 373 YIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQE 432

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYL 451
            + +   + +QG   ++V + ++L A +++    +G++ H+Y L++   +EG   +ES L
Sbjct: 433 AVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA--YEGRCYVESAL 490

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAK G +  +  IF K  +  +D+ TWN+MI+ + QNG  EEA   FR+M    V  
Sbjct: 491 MDMYAKCGRLDLSHYIFSKISA--KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + VTI+SVL AC  +  I  GK++HG  I+  +  ++F  ++LIDMY K G + +A  VF
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +PEKN V++ ++I  YG +G+ + ++SL R M+  G + D +TF+A++SAC++AG V 
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL++F  M +EY+I P  EH+ C+ D+  R GK+ +A E + ++  + +   IWG+LL 
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA-GIWGALLH 727

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+H + ELAE+ +++L ++D  NS  GY+VL+SNI A  G W+ V KVR+ M++  ++
Sbjct: 728 ACRVHRNVELAEIASQELFKLDPHNS--GYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQ 785

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  G SW+DV    + F + D+ HP S  IY  L+ + +E+R  G
Sbjct: 786 KIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEG 830



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 185/403 (45%), Gaps = 36/403 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +A+ ++DS      VI +T+I G+V N +  EA+ ++  + +       +    +SVL A
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG--IRPNAVAIASVLPA 458

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    +++G+ +H + ++       +V ++L++MY+ C                   + 
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC------------------GRL 500

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           DL   +F  +  ++ V WN+++S + +     EA+  FR M   G++ S ++  +V  A 
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +SL        ++G+++K       DLF  S+ I MY + G  ++A ++F++  E+N   
Sbjct: 561 ASLPAIYYGKEIHGVVIK--GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN++I  Y       E++ L   + E +    D VTFL+ +SA +   ++  G +L   +
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQE-EGFKADHVTFLALVSACAHAGQVQEGLRLFRCM 677

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            + +   P           +  +  M+  + + G  D+ + L+ +M    F  D+    A
Sbjct: 678 TEEYQIAP----------RMEHFACMVDLYSRAGKLDKAMELIVDMP---FKPDAGIWGA 724

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LL A    RN ++ +     L +   H  G    + ++ A +G
Sbjct: 725 LLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  L+  +F  I+    V WN++I  F  N  P EA+ L+ +M       S  N T SS
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYS--NVTISS 555

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA    +  GK +H   I+       F  ++L++MY  C                 
Sbjct: 556 VLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKC----------------- 598

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               +   +VF++M  +N V+WN+I++ Y       E+V   R M   G +   ++F+ +
Sbjct: 599 -GNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657

Query: 233 FPALSSLG 240
             A +  G
Sbjct: 658 VSACAHAG 665


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/711 (35%), Positives = 402/711 (56%), Gaps = 57/711 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++S+  +C +T    + K +H   +      S F+   L+N+Y++         +G    
Sbjct: 79  FNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYAS---------LG---- 122

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTIS 228
           +V  S+       FD ++R++V  WN+++S YV+   + EA+  F +++L    +    +
Sbjct: 123 DVSLSR-----GTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYT 177

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  V  A  +L D +    ++  + KLG ++  D+FVA+S I MY+  G    AR +FD+
Sbjct: 178 FPPVLKACQTLVDGRK---IHCWVFKLGFQW--DVFVAASLIHMYSRFGFVGIARSLFDD 232

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WN MI G +QN +  +A+++  + + L+ I  D VT  S L   +QL ++  
Sbjct: 233 MPFRDMGSWNAMISGLIQNGNAAQALDVLDE-MRLEGINMDSVTVASILPVCAQLGDIST 291

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
              +H Y+IK+ +   + V NA+I                     RDVVSWN++I+A+ Q
Sbjct: 292 ATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQ 351

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-- 446
           N          ++MQ  G   D +T+ +L S A+  R+    +  H +++R G   E   
Sbjct: 352 NDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVV 411

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + ++DMYAK G+I +A ++F  N    +D  +WN +I+GYTQNGL  EA   +R M E
Sbjct: 412 IGNAVMDMYAKLGVIDSAHKVF--NLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469

Query: 507 -HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              +  N  T  S+L A   +G ++ G ++HG  I+  L  +VFVGT LID+Y K G + 
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLV 529

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  +F ++P ++SV +  +I  +G HG  E+AL LFR M+  G++PD +TF+++LSACS
Sbjct: 530 DAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACS 589

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++GLVDEG   F LM QEY I+PS +HY C+ D+LGR G +  AY+F+K++    +   I
Sbjct: 590 HSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDA-SI 647

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LLG+CR+HG+ EL +  + +L E+D+ N   GY+VLLSNIYA  G WE VDKVR   
Sbjct: 648 WGALLGACRIHGNIELGKFASDRLFEVDSENV--GYYVLLSNIYANVGKWEGVDKVRSLA 705

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RERGL+K  G S I+V   V+ F + +Q HP+  +IY  L  L  +M++ G
Sbjct: 706 RERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLG 756



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 184/745 (24%), Positives = 347/745 (46%), Gaps = 104/745 (13%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           ++H+L     K+++  I  RL  +    G   L+R  FD I R     WN++I  +V N 
Sbjct: 94  RLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNG 153

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EAI  + Q+   + + + D YT+  VLKAC   + L  G+ +HC   +       FV
Sbjct: 154 HFREAIDCFYQLLLVTKFQA-DFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDVFV 209

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SL++MYS              +V +  S       +FD M  R++ +WN ++S  ++ 
Sbjct: 210 AASLIHMYSR-----------FGFVGIARS-------LFDDMPFRDMGSWNAMISGLIQN 251

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               +A+     M   GI   +++  ++ P  + LGD  +A +++  ++K G E+  +LF
Sbjct: 252 GNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEF--ELF 309

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V+++ I MYA+ G    A+K+F     R+   WN++I  Y QN+ PV A   F + ++L+
Sbjct: 310 VSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFK-MQLN 368

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVIE---------- 373
            +  D +T +S  S  +Q ++    + +H +I+ + ++   V++ NAV++          
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDS 428

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ--GFMIDSVTVTALLSAA 421
                     +DVVSWNT+IS + QNGL  E +  VY M ++     ++  T  ++L+A 
Sbjct: 429 AHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIE-VYRMMEECREIKLNQGTWVSILAAY 487

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +++     G + H +L++  +H +  + + LID+Y K G +  A  +F +          
Sbjct: 488 AHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPR--ESSVP 545

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WNA+I+ +  +G  E+A   FR+M +  V P+ VT  S+L AC+  G ++ GK       
Sbjct: 546 WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ 605

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
            Y +  ++     ++D+  ++G +  A +    +P                         
Sbjct: 606 EYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMP------------------------- 640

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP-STEHYCCVADM 659
                    + PDA  + A+L AC   G ++ G    D +   +++   +  +Y  ++++
Sbjct: 641 ---------LHPDASIWGALLGACRIHGNIELGKFASDRL---FEVDSENVGYYVLLSNI 688

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRL-------HGHSELAEVVAK-KL 709
              VGK  E  + V+ L  E  + +   W S+  + R+         H +  E+ A+ ++
Sbjct: 689 YANVGK-WEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRI 747

Query: 710 L--EMDTRNSMPGYHVLLSNIYAEE 732
           L  +M +   +P Y  +L ++  +E
Sbjct: 748 LTAKMKSLGYIPDYSFVLQDVEEDE 772


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 253/766 (33%), Positives = 414/766 (54%), Gaps = 54/766 (7%)

Query: 58  ARQLFDSITRPTTVI---WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +F S+ R        WN +I G         A+L Y +M         D++T+  V+
Sbjct: 94  AVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVV 153

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K+CA    + +G+ VH        +   FV ++L+ MY+      DA             
Sbjct: 154 KSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDAR------------ 201

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD M  R+ V WN ++  YVK      AV  F  M   G  P+  +      
Sbjct: 202 ------QVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLS 255

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             ++  D      ++ L VK G E  +++ VA++ + MYA+  C D   K+F      + 
Sbjct: 256 VSATESDLFFGVQLHTLAVKYGLE--SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI G VQN    +A+ LF   ++   I  D VT +S L A++ L   + G++LH 
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCD-MQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHG 372

Query: 355 YIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDE 394
           YI++N V + V +++A+++                     DVV  +TMIS +V NG+  E
Sbjct: 373 YIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQE 432

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYL 451
            + +   + +QG   ++V + ++L A +++    +G++ H+Y L++   +EG   +ES L
Sbjct: 433 AVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA--YEGRCYVESAL 490

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAK G +  +  IF K  +  +D+ TWN+MI+ + QNG  EEA   FR+M    V  
Sbjct: 491 MDMYAKCGRLDLSHYIFSKISA--KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + VTI+SVL AC  +  I  GK++HG  I+  +  ++F  ++LIDMY K G + +A  VF
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +PEKN V++ ++I  YG +G+ + ++SL R M+  G + D +TF+A++SAC++AG V 
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL++F  M +EY+I P  EH+ C+ D+  R GK+ +A E + ++  + +   IWG+LL 
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA-GIWGALLH 727

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+H + ELAE+ +++L ++D  NS  GY+VL+SNI A  G W+ V KVR+ M++  ++
Sbjct: 728 ACRVHRNVELAEIASQELFKLDPHNS--GYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQ 785

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           K  G SW+DV    + F + D+ HP S  IY  L+ + +E+R  G+
Sbjct: 786 KIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 185/403 (45%), Gaps = 36/403 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +A+ ++DS      VI +T+I G+V N +  EA+ ++  + +       +    +SVL A
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQG--IRPNAVAIASVLPA 458

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    +++G+ +H + ++       +V ++L++MY+ C                   + 
Sbjct: 459 CASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC------------------GRL 500

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           DL   +F  +  ++ V WN+++S + +     EA+  FR M   G++ S ++  +V  A 
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSAC 560

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +SL        ++G+++K       DLF  S+ I MY + G  ++A ++F++  E+N   
Sbjct: 561 ASLPAIYYGKEIHGVVIK--GPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN++I  Y       E++ L   + E +    D VTFL+ +SA +   ++  G +L   +
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQE-EGFKADHVTFLALVSACAHAGQVQEGLRLFRCM 677

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            + +   P           +  +  M+  + + G  D+ + L+ +M    F  D+    A
Sbjct: 678 TEEYQIAP----------RMEHFACMVDLYSRAGKLDKAMELIVDMP---FKPDAGIWGA 724

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LL A    RN ++ +     L +   H  G    + ++ A +G
Sbjct: 725 LLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  L+  +F  I+    V WN++I  F  N  P EA+ L+ +M       S  N T SS
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYS--NVTISS 555

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA    +  GK +H   I+       F  ++L++MY  C                 
Sbjct: 556 VLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKC----------------- 598

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               +   +VF++M  +N V+WN+I++ Y       E+V   R M   G +   ++F+ +
Sbjct: 599 -GNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657

Query: 233 FPALSSLG 240
             A +  G
Sbjct: 658 VSACAHAG 665


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/775 (33%), Positives = 413/775 (53%), Gaps = 49/775 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPY-TSCDNYTYS 111
           GR   AR LFD ++  T   WN +I  ++ +    EA+ +Y  M+ S+    + D  T +
Sbjct: 109 GRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA 168

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           SVLKA     + R G  VH   ++   + S FV N+L+ MY+ C   LD+ M        
Sbjct: 169 SVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKC-GILDSAM-------- 219

Query: 172 DYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                    +VF+ M   R+V +WN+++S  ++   +++A+  FR M R  +  ++ + V
Sbjct: 220 ---------RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTV 270

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V    + L        ++  L+K GSE VN     ++ + MY + G  D A ++F    
Sbjct: 271 GVLQVCTELAQLNLGRELHAALLKSGSE-VN--IQCNALLVMYTKCGRVDSALRVFREID 327

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E++   WN+M+  YVQN    EAIE   ++L       D    +S  SAV  L  L  G+
Sbjct: 328 EKDYISWNSMLSCYVQNGLYAEAIEFISEMLR-GGFQPDHACIVSLSSAVGHLGWLLNGK 386

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++HAY IK  +     V N +++                    +D +SW T+I+ + Q+ 
Sbjct: 387 EVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSS 446

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
              E L +  E QK+G  +D + + ++L A S L    + KQ H Y +R+G+    +++ 
Sbjct: 447 RHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNR 506

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           +ID+Y + G +  + ++FE  +   +D  TW +MI  Y  +GLL EA V F +M   +V 
Sbjct: 507 IIDIYGECGEVYHSLKMFETVE--QKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQ 564

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ V + S+L A   + ++  GK++HGF IR        + +SL+DMYS  G ++ A  V
Sbjct: 565 PDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKV 624

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +  K+ V +T MI   G HG  ++A+ LF+ M   G+ PD ++F+A+L ACS++ LV
Sbjct: 625 FNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLV 684

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG    D+M   Y+++P  EHY CV D+LGR G+  EAYEF+K +  +   + +W SLL
Sbjct: 685 NEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSV-VWCSLL 743

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+CR+H + ELA V A +LLE++  N  PG +VL+SN++AE G W N  +VR  + ERGL
Sbjct: 744 GACRVHKNHELAVVAANRLLELEPDN--PGNYVLVSNVFAEMGKWNNAKEVRARISERGL 801

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           RK+  CSWI++G  V+ F ++D  H  + +I   L  +   +R  G  T    +V
Sbjct: 802 RKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSV 856



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 207/418 (49%), Gaps = 32/418 (7%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+   V  GS   +D F+A+  +FMY + G    AR +FD    R    WN +IG Y+ +
Sbjct: 80  VHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSS 139

Query: 308 NHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
               EA+ ++  +++     +  D  T  S L A     +   G ++H   +K+ +    
Sbjct: 140 GSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRST 199

Query: 366 IVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            V NA+I                      RDV SWN+MIS  +QNG+  + L L   MQ+
Sbjct: 200 FVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
               ++S T   +L   + L   ++G++ HA LL+ G       + L+ MY K G + +A
Sbjct: 260 AVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSA 319

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
            ++F + D  ++D  +WN+M++ Y QNGL  EA     +ML     P+   I S+  A  
Sbjct: 320 LRVFREID--EKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVG 377

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G +  GK++H ++I+  LD +  VG +L+DMY K   I Y+A+VF ++  K+ +++TT
Sbjct: 378 HLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTT 437

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           +I  Y Q      AL +FR  +  GI+ D +   ++L ACS       GL+   L +Q
Sbjct: 438 IITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS-------GLETILLAKQ 488


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/773 (32%), Positives = 415/773 (53%), Gaps = 58/773 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +FD++     + WN ++ G+  N L  + + ++  +   + +   DN+T+ S
Sbjct: 93  GSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQP-DNFTFPS 151

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC    ++R+G+ +H   I+       FV N+L+ MY  C  ++D  M         
Sbjct: 152 VIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC-GAVDEAM--------- 201

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTIS 228
                   KVFD M   N+V+WN+++  + +     ++   F +++ M    G+ P  ++
Sbjct: 202 --------KVFDFMPETNLVSWNSMICAFSENGFSRDS---FDLLMEMLGEEGLLPDVVT 250

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V + P  +  G+      ++GL VKLG     ++ V ++ ++MY++ G  + A+  F  
Sbjct: 251 VVTILPVCAGEGEVDIGMGIHGLAVKLG--LSEEVMVNNAMVYMYSKCGYLNEAQMSFVK 308

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELD 347
              +N   WNTMI  +       EA  L  ++ ++ +E+  ++VT L+ L A     +L 
Sbjct: 309 NNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLR 368

Query: 348 LGQQLHAYIIKN----------FV-------ALPVI--VLNAVIERDVVSWNTMISAFVQ 388
             ++LH Y  ++          F+       AL     V + + ++ V SWN +I    Q
Sbjct: 369 SLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQ 428

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FE 445
           NG   + L L+++M   G   D  T+++LL A ++L++   GK+ H Y+LR+G+    F 
Sbjct: 429 NGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFV 488

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           G  + L+  Y   G   +AR +F++    D++  +WNAMI+GY+QNGL  E+   FR+ L
Sbjct: 489 G--TSLLSHYIHCGKASSARVLFDRMK--DKNLVSWNAMISGYSQNGLPYESLALFRKSL 544

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              +  + + I SV  AC+ +  + LGK+ HG+ ++ L  ++ FVG S+IDMY+KSG I 
Sbjct: 545 SEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIK 604

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF  + +KN  ++  +I+ +G HG  + A+ L+  MK  G  PD  T++ +L AC 
Sbjct: 605 ESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACG 664

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AGLV+EGL+ F  MQ    I+P  EHY C+ DML R G++ +A   V E+ EE +   I
Sbjct: 665 HAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADN-RI 723

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W SLL SCR  G  E+ E VAKKLLE++   +    +VLLSN+YA  G W+ V +VR+ M
Sbjct: 724 WSSLLRSCRTFGALEIGEKVAKKLLELEPDKAEN--YVLLSNLYAGLGKWDGVRRVRQMM 781

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +E GL+K+ GCSWI+VGG V  F   D   P+S +I  +  RL   +   G K
Sbjct: 782 KEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYK 834



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 181/644 (28%), Positives = 321/644 (49%), Gaps = 49/644 (7%)

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +NL    IL+ S  + ++  +         +L+AC   +++  G+ +H          + 
Sbjct: 19  DNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRND 78

Query: 143 FVYNS-LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           +V N+ L+ MY+ C S LD+ +                  VFD M  +N++ WN +VS Y
Sbjct: 79  YVLNTRLIKMYAMCGSPLDSRL------------------VFDNMETKNLIQWNALVSGY 120

Query: 202 VKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
            +   Y + V+ F  ++     +P   +F +V  A   + D +  +V++G+++K+G   V
Sbjct: 121 TRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMG--LV 178

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            D+FV ++ + MY + G  D A K+FD   E N   WN+MI  + +N    ++ +L +++
Sbjct: 179 LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM 238

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           L  + ++ D VT ++ L   +   E+D+G  +H   +K  ++  V+V NA++        
Sbjct: 239 LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGY 298

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG--FMIDSVTVTALL 418
                        ++VVSWNTMISAF   G  +E   L+ EMQ QG     + VT+  +L
Sbjct: 299 LNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVL 358

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            A  +       K+ H Y  RH      + +  I  YAK G + +A ++F  +  GD+  
Sbjct: 359 PACLDKLQLRSLKELHGYSFRHCFQHVELSNAFILAYAKCGALNSAEKVF--HGIGDKTV 416

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           ++WNA+I G+ QNG   +A     QM      P+  TI+S+L AC  + +++ GK++HG+
Sbjct: 417 SSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGY 476

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            +R  L+ + FVGTSL+  Y   G  + A  +F ++ +KN V++  MI GY Q+G+   +
Sbjct: 477 VLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYES 536

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L+LFR     GI+   I  V+V  ACS    +  G +    + +  + + +    C + D
Sbjct: 537 LALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVG-CSIID 595

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           M  + G + E+ +    L ++ NV   W +++ +  +HGH + A
Sbjct: 596 MYAKSGCIKESRKVFDGL-KDKNVAS-WNAIIVAHGIHGHGKEA 637



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 24/199 (12%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS     G+   AR LFD +     V WN +I G+  N LPYE++ L+   K  S   
Sbjct: 491 SLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFR--KSLSEGI 548

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY--STCLSSLDA 161
                   SV  AC++   LR+GK  H + ++       FV  S+++MY  S C+     
Sbjct: 549 QSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESR- 607

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              KVFD ++ +NV +WN I+  +       EA+  +  M ++G
Sbjct: 608 -------------------KVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVG 648

Query: 222 IRPSTISFVNVFPALSSLG 240
             P   +++ +  A    G
Sbjct: 649 QMPDRFTYIGILMACGHAG 667


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 244/742 (32%), Positives = 402/742 (54%), Gaps = 55/742 (7%)

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N L  +AI ++ ++   + + + DN+T+  V+KAC  + +  +G+ +H   I+       
Sbjct: 8   NELYSDAIDMFVKLITDTEFNA-DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV N+L+ MY                    +   D   KVF  M  RN+V+WN+I+S + 
Sbjct: 67  FVGNALIAMYGK------------------FGFVDAAVKVFHYMPVRNLVSWNSIISGFS 108

Query: 203 KTERYVEAVRQFRMMLRM-----GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           +     +    F M++ M     G+ P   + V V P  +   D +    ++GL VKLG 
Sbjct: 109 ENGFSKDC---FDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLG- 164

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
               D+ V +S + MY++ G    A+ +FD    +N   WNTMIGG     +  EA  LF
Sbjct: 165 -LSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLF 223

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            ++   ++I  ++VT L+ L A  ++ +L   ++LH Y I++      +V N  +     
Sbjct: 224 REMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAK 283

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           + V SWN +I    QNG   + L L  +M   G + D  T+ +L
Sbjct: 284 CGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSL 343

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDR 476
           L A+++L++   GK+ H ++LRHG+  +      L+ +Y   G   +AR +F+  +  ++
Sbjct: 344 LLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME--EK 401

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
              +WNAMI+GY+QNGL E+A + FR+++     P+ + + SVL AC+    + LGK+ H
Sbjct: 402 SSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETH 461

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            ++++ LL ++VFV  S IDMY+KSG I  + +VF  +  K+  ++  +I  YG HG  E
Sbjct: 462 CYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGE 521

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            ++ LF  M+  G  PD  TF+ +L+ CS+AGLV+EGL+ F+ MQ  + I+P  EHY CV
Sbjct: 522 ESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACV 581

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            DMLGR G++ +A   V E+ E+ +   +W SLL  CR  G  E+ ++VA+KLLE++ +N
Sbjct: 582 MDMLGRAGRLDDALRLVHEMPEQPDS-RVWSSLLSFCRNFGELEIGQIVAEKLLELEPKN 640

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
                +V LSN+YA  G W++V +VR+ +++ GL+K+ GCSWI++GG V+ F + D   P
Sbjct: 641 VEN--YVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLP 698

Query: 777 QSHKIYEMLERLAMEMRNAGNK 798
           QS ++     +L  +M   G K
Sbjct: 699 QSKEMSMTWRKLEKKMCKIGYK 720



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 269/566 (47%), Gaps = 73/566 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  +     V WN+II GF  N    +   +  +M         D  T  +VL  C
Sbjct: 85  AVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC 144

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++++G  +H   ++   +    V NSL++MYS C    +A+M              
Sbjct: 145 AREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQM-------------- 190

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPAL 236
               +FD   R+N V+WNT++          EA   FR M ++  I  + ++ +N+ PA 
Sbjct: 191 ----LFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             +   +S   ++G  ++ G +Y  D  VA+  +  YA+ G    A ++F +   +    
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQY--DELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +IGG  QN  P +A+ L++Q +    +V D  T  S L A + L+ L  G+++H ++
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQ-MTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 357 IKN------FVALPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +++      F+ + ++ L              + + E+  VSWN MIS + QNGL ++ L
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL----- 451
           +L  ++   GF    + V ++L A S      +GK+TH Y L+  +    ME        
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALL----MEDVFVACST 479

Query: 452 IDMYAKSGLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
           IDMYAKSG IK +R +F+  KN    +D A+WNA+IA Y  +G  EE+   F +M +   
Sbjct: 480 IDMYAKSGCIKESRSVFDGLKN----KDLASWNAIIAAYGVHGDGEESIELFERMRKVGQ 535

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG--------TSLIDMYSKS 561
            P+  T   +L  C+  G +E G       ++Y  +   F G          ++DM  ++
Sbjct: 536 MPDGFTFIGILTVCSHAGLVEEG-------LKYFNEMQNFHGIEPKLEHYACVMDMLGRA 588

Query: 562 GVINYAANVFAKIPEK-NSVTYTTMI 586
           G ++ A  +  ++PE+ +S  +++++
Sbjct: 589 GRLDDALRLVHEMPEQPDSRVWSSLL 614



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 207/482 (42%), Gaps = 67/482 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LFD   R   V WNT+I G       +EA  L+ +M+        +  T  ++L AC
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQED-IEVNEVTVLNILPAC 246

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E   LR  K +H + IR        V N  +  Y+ C   + AE               
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAE--------------- 291

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF +M  + V +WN ++    +     +A+  +  M   G+ P   +  ++  A +
Sbjct: 292 ---RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASA 348

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    V+G +++ G E   D F+  S + +Y   G    AR +FD   E+++  W
Sbjct: 349 HLKSLRYGKEVHGFVLRHGLEI--DSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSW 406

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN  P +A+ LF +++  D     D+  +S L A SQ   L LG++ H Y +
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVS-DGFQPSDIAVVSVLGACSQQSALRLGKETHCYAL 465

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K       FVA   I              V + +  +D+ SWN +I+A+  +G  +E + 
Sbjct: 466 KALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIE 525

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-------HFEGMESY 450
           L   M+K G M D  T   +L+  S           HA L+  G+       +F G+E  
Sbjct: 526 LFERMRKVGQMPDGFTFIGILTVCS-----------HAGLVEEGLKYFNEMQNFHGIEPK 574

Query: 451 L------IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           L      +DM  ++G +  A ++  +      D   W+++++     G LE   +   ++
Sbjct: 575 LEHYACVMDMLGRAGRLDDALRLVHEMPE-QPDSRVWSSLLSFCRNFGELEIGQIVAEKL 633

Query: 505 LE 506
           LE
Sbjct: 634 LE 635



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 35/222 (15%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS     G    AR LFD +   ++V WN +I G+  N LP +A++L+ ++       
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQP 436

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY--STCLSSLDA 161
           S  +    SVL AC++   LR+GK  HC+ ++       FV  S ++MY  S C+    +
Sbjct: 437 S--DIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRS 494

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                               VFD ++ +++ +WN I++ Y       E++  F  M ++G
Sbjct: 495 --------------------VFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVG 534

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
             P   +F+ +    S  G           LV+ G +Y N++
Sbjct: 535 QMPDGFTFIGILTVCSHAG-----------LVEEGLKYFNEM 565


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/767 (31%), Positives = 407/767 (53%), Gaps = 53/767 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + A ++F  I     V W  +I GFV       A+ L+ +M++       + +TY++
Sbjct: 177 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREG--VEANEFTYAT 234

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            LKAC+   +L  GK VH   I+       FV ++L+++Y+ C      EMV        
Sbjct: 235 ALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKC-----GEMV-------- 281

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                L  +VF  M ++N V+WN +++ + +     + +  F  M    I  S  +   V
Sbjct: 282 -----LAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTV 336

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               ++ G+ ++  +V+ L +++G E   D F++   + MY++ G    A K+F    + 
Sbjct: 337 LKGCANSGNLRAGQIVHSLAIRIGCEL--DEFISCCLVDMYSKCGLAGDALKVFVRIEDP 394

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W+ +I    Q     EA E+F + +    ++ +  T  S +SA + L +L  G+ +
Sbjct: 395 DVVSWSAIITCLDQKGQSREAAEVF-KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453

Query: 353 HAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           HA + K      N V   ++              V  A   RD++SWN ++S F  N   
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHFEGMES 449
           D GL +  +M  +GF  +  T  ++L + S+L + D+GKQ HA ++++   G  F G  +
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG--T 571

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMYAK+  ++ A  IF  N    RD   W  ++AGY Q+G  E+A   F QM    V
Sbjct: 572 ALVDMYAKNRFLEDAETIF--NRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN  T+AS L  C+ +  ++ G+QLH  +I+     ++FV ++L+DMY+K G +  A  
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEV 689

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  +  +++V++ T+I GY QHG   +AL  F +M   G  PD +TF+ VLSACS+ GL
Sbjct: 690 VFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGL 749

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           ++EG + F+ + + Y I P+ EHY C+ D+LGR GK  E   F++E+    NVL IW ++
Sbjct: 750 IEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVL-IWETV 808

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+C++HG+ E  E  A KL E++    +   ++LLSN++A +G W++V  VR  M  RG
Sbjct: 809 LGACKMHGNIEFGERAAMKLFELEPE--IDSNYILLSNMFAAKGMWDDVTNVRALMSTRG 866

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++KE GCSW++V G V+ F S D  HP+  +I+  L+ L  ++ + G
Sbjct: 867 VKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 913



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 169/628 (26%), Positives = 302/628 (48%), Gaps = 51/628 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           YS +L+ CA   +L  GKA+H   I+   NP   ++NSL+N+Y+ C S+           
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSA----------- 179

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                  +  CKVF  +  R+VV+W  +++ +V       AV  F  M R G+  +  ++
Sbjct: 180 -------NYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTY 232

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
                A S   D +    V+   +K+G    +DLFV S+ + +YA+ G    A ++F   
Sbjct: 233 ATALKACSMCLDLEFGKQVHAEAIKVGD--FSDLFVGSALVDLYAKCGEMVLAERVFLCM 290

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ++N   WN ++ G+ Q     + + LF + +   EI F   T  + L   +    L  G
Sbjct: 291 PKQNAVSWNALLNGFAQMGDAEKVLNLFCR-MTGSEINFSKFTLSTVLKGCANSGNLRAG 349

Query: 350 QQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           Q +H+  I+       F++  ++              V   + + DVVSW+ +I+   Q 
Sbjct: 350 QIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQK 409

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           G   E   +   M+  G + +  T+ +L+SAA++L +   G+  HA + ++G  ++  + 
Sbjct: 410 GQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+ MY K G ++   ++FE   + +RD  +WNA+++G+  N   +     F QML   
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEA--TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEG 527

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             PN+ T  S+L +C+ + +++LGKQ+H   ++  LD N FVGT+L+DMY+K+  +  A 
Sbjct: 528 FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAE 587

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F ++ +++   +T ++ GY Q G  E+A+  F  M+  G++P+  T  + LS CS   
Sbjct: 588 TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 647

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            +D G Q+  +     K   S + +   A  DM  + G V +A      L     V   W
Sbjct: 648 TLDSGRQLHSMA---IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV--SW 702

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            +++     HG    A    + +L+  T
Sbjct: 703 NTIICGYSQHGQGGKALKAFEAMLDEGT 730


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 240/746 (32%), Positives = 395/746 (52%), Gaps = 86/746 (11%)

Query: 106  DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNP--SRFVYNSLLNMYSTCLSSLDAEM 163
            DN+ + +VLKA A   +L +GK +H H  +    P  S  V NSL+NMY  C     A  
Sbjct: 329  DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAAR- 387

Query: 164  VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             +VFD +  R+ V+WN++++   + E +  ++  FR+ML   + 
Sbjct: 388  -----------------QVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVD 430

Query: 224  PSTISFVNVFPALSSL-GDYKSADVVYGLLVKLGS--EYVNDLFVASSAIFMYAELGCFD 280
            P++ + V+V  A S + G  +    V+   ++ G    Y N+  V      MYA LG  +
Sbjct: 431  PTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVT-----MYARLGRVN 485

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             A+ +F     ++   WNT+I    QN+   EA+ ++V ++ +D +  D VT  S L A 
Sbjct: 486  DAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL-MYVYLMIVDGVRPDGVTLASVLPAC 544

Query: 341  SQLQELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSW 379
            SQL+ L +G+++H Y ++N       FV   ++              V + V+ R V  W
Sbjct: 545  SQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVW 604

Query: 380  NTMISAFVQNGLDDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            N +++ + +N  DD+ L L  EM  +  F  ++ T  ++L A    +     +  H Y++
Sbjct: 605  NALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIV 664

Query: 439  RHGIHFEGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            + G    G + Y    L+DMY++ G ++ ++ IF + +   RD  +WN MI G    G  
Sbjct: 665  KRGF---GKDKYVQNALMDMYSRMGRVEISKTIFGRMNK--RDIVSWNTMITGCIVCGRY 719

Query: 495  EEAFVAFRQMLEHN------------------VTPNVVTIASVLPACNPMGNIELGKQLH 536
            ++A     +M                        PN VT+ +VLP C  +  +  GK++H
Sbjct: 720  DDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIH 779

Query: 537  GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
             ++++  L  +V VG++L+DMY+K G +N A+ VF ++P +N +T+  +I+ YG HG  E
Sbjct: 780  AYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGE 839

Query: 597  RALSLFRSMKGCG------IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
             AL LFR M   G      I P+ +T++A+ +ACS++G+VDEGL +F  M+  + ++P  
Sbjct: 840  EALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRG 899

Query: 651  EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
            +HY C+ D+LGR G+V EAYE +  +    N ++ W SLLG+CR+H   E  E+ AK L 
Sbjct: 900  DHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLF 959

Query: 711  EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
             ++   ++  ++VL+SNIY+  G W+    VRK+M+E G+RKE GCSWI+ G  V++F S
Sbjct: 960  VLEP--NVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLS 1017

Query: 771  KDQEHPQSHKIYEMLERLAMEMRNAG 796
             D  HPQS +++E LE L+  MR  G
Sbjct: 1018 GDASHPQSKELHEYLETLSQRMRKEG 1043



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 170/640 (26%), Positives = 291/640 (45%), Gaps = 86/640 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           ARQ+FD I     V WN+ +I  +C    +E ++ L+  M   S      ++T  SV  A
Sbjct: 386 ARQVFDDIPDRDHVSWNS-MIATLCRFEEWELSLHLFRLML--SENVDPTSFTLVSVAHA 442

Query: 117 CAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           C+  R  +R+GK VH + +R   +   +  N+L+ MY+      DA+             
Sbjct: 443 CSHVRGGVRLGKQVHAYTLR-NGDLRTYTNNALVTMYARLGRVNDAK------------- 488

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 +F     +++V+WNT++S   + +R+ EA+    +M+  G+RP  ++  +V PA
Sbjct: 489 -----ALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPA 543

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S L   +    ++   ++ G + + + FV ++ + MY         R +FD  + R   
Sbjct: 544 CSQLERLRIGREIHCYALRNG-DLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           VWN ++ GY +N    +A+ LFV+++   E   +  TF S L A  + +     + +H Y
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY 662

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           I+K        V NA+++                    RD+VSWNTMI+  +  G  D+ 
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722

Query: 396 LMLVYEMQ-KQG-----------------FMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           L L++EMQ +QG                 F  +SVT+  +L   + L     GK+ HAY 
Sbjct: 723 LNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYA 782

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++  +  +  + S L+DMYAK G +  A ++F++     R+  TWN +I  Y  +G  EE
Sbjct: 783 VKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI--RNVITWNVLIMAYGMHGKGEE 840

Query: 497 AFVAFRQMLEHN------VTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVF 549
           A   FR M          + PN VT  ++  AC+  G ++ G  L H     + ++    
Sbjct: 841 ALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGD 900

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQ-HGMSE----RALSLFR 603
               L+D+  +SG +  A  +   +P   N V   + +LG  + H   E     A  LF 
Sbjct: 901 HYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFV 960

Query: 604 SMKGCGIEPDAITFVAVLSAC-SYAGLVDEGLQIFDLMQQ 642
                 +EP+  +   ++S   S AGL D+ L +   M++
Sbjct: 961 ------LEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKE 994



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 261/560 (46%), Gaps = 51/560 (9%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           + RR+   W  ++     +  + +A+  +  ML     P   +F  V  A +++ D    
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++  + K G    + + VA+S + MY + G    AR++FD+  +R+   WN+MI    
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 306 QNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQLQ-ELDLGQQLHAYIIKN--- 359
           +      ++ LF  +L   +D   F   T +S   A S ++  + LG+Q+HAY ++N   
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSF---TLVSVAHACSHVRGGVRLGKQVHAYTLRNGDL 466

Query: 360 --FVALPVIVLNAVIER--------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             +    ++ + A + R              D+VSWNT+IS+  QN   +E LM VY M 
Sbjct: 467 RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI 526

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLI 461
             G   D VT+ ++L A S L    +G++ H Y LR+G   E   + + L+DMY      
Sbjct: 527 VDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVL 520
           K  R +F+      R  A WNA++AGY +N   ++A   F +M+ E    PN  T ASVL
Sbjct: 587 KKGRLVFD--GVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVL 644

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
           PAC         + +HG+ ++    ++ +V  +L+DMYS+ G +  +  +F ++ +++ V
Sbjct: 645 PACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIV 704

Query: 581 TYTTMILGYGQHGMSERALSLFRSMK------------------GCGIEPDAITFVAVLS 622
           ++ TMI G    G  + AL+L   M+                  G   +P+++T + VL 
Sbjct: 705 SWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
            C+    + +G +I     ++ K+         + DM  + G +  A     ++    NV
Sbjct: 765 GCAALAALGKGKEIHAYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NV 822

Query: 683 LEIWGSLLGSCRLHGHSELA 702
           +  W  L+ +  +HG  E A
Sbjct: 823 I-TWNVLIMAYGMHGKGEEA 841



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 238/543 (43%), Gaps = 71/543 (13%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           Q+H+ +     L+T T  + ++   + GR + A+ LF        V WNT+I     N+ 
Sbjct: 455 QVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDR 514

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFV 144
             EA++    M         D  T +SVL AC++   LRIG+ +HC+ +R      + FV
Sbjct: 515 FEEALMYVYLMIVDG--VRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFV 572

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             +L++MY  C       +                  VFD + RR V  WN +++ Y + 
Sbjct: 573 GTALVDMYCNCKQPKKGRL------------------VFDGVVRRTVAVWNALLAGYARN 614

Query: 205 ERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           E   +A+R F  M+      P+  +F +V PA      +   + ++G +VK G  +  D 
Sbjct: 615 EFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRG--FGKDK 672

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV---------------QNN 308
           +V ++ + MY+ +G  + ++ IF    +R+   WNTMI G +               Q  
Sbjct: 673 YVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRR 732

Query: 309 HPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
              +  + FV   +   + F  + VT ++ L   + L  L  G+++HAY +K  +A+ V 
Sbjct: 733 QGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVA 792

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V +A+++                    R+V++WN +I A+  +G  +E L L   M   G
Sbjct: 793 VGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGG 852

Query: 407 ------FMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAKS 458
                    + VT  A+ +A S+    D G    H     HG+   G   + L+D+  +S
Sbjct: 853 GSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRS 912

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTI 516
           G +K A ++     S       W++++     +  +E   +A + +  LE NV  + V +
Sbjct: 913 GRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLM 972

Query: 517 ASV 519
           +++
Sbjct: 973 SNI 975


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/773 (31%), Positives = 419/773 (54%), Gaps = 50/773 (6%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L ++C + R     ++FD +   T   WN +I  +V N  P  A+ +Y  M+        
Sbjct: 103 LLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEG--VPL 160

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D Y++  +LKAC + R++R G  +HC  ++   N + F+ N+L++MY+            
Sbjct: 161 DLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYA------------ 208

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            K   +  +K     ++FD  + + + V WN+I+S Y  + + +E ++ FR M   G   
Sbjct: 209 -KTDHLSAAK-----RLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPAS 262

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           ++ + V+   A       K    ++  ++K  S +  +++V ++ I MYA  G    A +
Sbjct: 263 NSYTIVSALTACEGFSYAKLGKEIHAAVLK--STHSFEVYVCNALIAMYARCGKMLEAGR 320

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           I       +   WN++I GYVQN    EA++ F  ++       D+V+  S ++A  +L 
Sbjct: 321 ILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKP-DEVSLTSVIAASGRLS 379

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            L  G +LHAY+IK+     ++V N +I                    E+D++SW T+I+
Sbjct: 380 NLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA 439

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +  N    E L L  ++ K+   ID + + ++L A S L++  + K+ H ++LR G+  
Sbjct: 440 GYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLID 499

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             +++ L+D+Y K   +  A ++FE      +D  +W +MI+    NG   EA   FR+M
Sbjct: 500 TVIQNELVDVYGKCRNMGYASRVFESIKG--KDVVSWTSMISSSALNGNENEAVELFRRM 557

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
            E  +  + V +  +L A   +  ++ G+++HG+ +R        +  +++DMY+  G +
Sbjct: 558 AETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDL 617

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  VF +I  K  + YT+MI  YG HG  + ++ LF  M+   + PD I+F+A+L AC
Sbjct: 618 QSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYAC 677

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S+AGL+DEG +   +M+ EYK++P  EHY C+ DMLGR   VVEA+EFVK +  E    E
Sbjct: 678 SHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTT-E 736

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +W +LL +CR H   E+ E+ A++LLE++ +N  PG  VL+SN++AE+G W +V+KVR +
Sbjct: 737 VWCALLAACRSHSEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAK 794

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM-RNAG 796
           M+  G+ K  GCSWI++ G V++F ++D+ HP++ +IYE L  +  ++ R +G
Sbjct: 795 MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESG 847


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 227/640 (35%), Positives = 374/640 (58%), Gaps = 35/640 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD M  ++ V WN +++ +VK      AV+ F  M     +P++I+F +V    +S  
Sbjct: 28  RLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEA 87

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +  + ++GL++  G  +  D  VA++ + MY++ G    A K+F+   + N   WN M
Sbjct: 88  LSEFGNQLHGLVISCGFHF--DPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGM 145

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I G+VQN    EA  LF +++    +  D +TF S L +V++   L  G+++H YI+++ 
Sbjct: 146 IAGFVQNGFMDEASLLFSEMISAG-VSPDSITFASFLPSVTESASLKQGKEIHGYILRHG 204

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +AL V + +A+I+                     D+V    +IS +V NGL+++ L +  
Sbjct: 205 IALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFR 264

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSG 459
            + ++    ++VT+ ++L A + L   ++GK+ HA +L+HG+     + S ++DMYAK G
Sbjct: 265 WLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCG 324

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A QIF +    ++D   WNA+I   +QNG  +EA   FRQM    ++ + V+I++ 
Sbjct: 325 RLDLAYQIFRRMP--EKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAA 382

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +  +  GK +H F I+   D  VF  ++LIDMY K G ++ A  VF  + EKN 
Sbjct: 383 LSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNE 442

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++ ++I  YG HG  E +L+LF  M   GI+PD +TF+ +LSAC +AG VD+G+Q F  
Sbjct: 443 VSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRC 502

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL---GEEGNVLEIWGSLLGSCRLH 696
           M +EY I    EHY C+ D+ GR G++ EA+E +K +    ++G    +WG+LLG+CR+H
Sbjct: 503 MTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDG----VWGTLLGACRVH 558

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+ ELAEV ++ LL++D  NS  G +VLLSN++A+ G W +V K+R  M++RG++K  G 
Sbjct: 559 GNVELAEVASRCLLDLDPENS--GCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGY 616

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V    + F + D  HP+S +IY +L  L +E+R  G
Sbjct: 617 SWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEG 656



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 162/501 (32%), Positives = 261/501 (52%), Gaps = 33/501 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D FV SS I +YAE GC + AR++FD    ++  +WN M+ G+V+   P  A+++F  + 
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
              +   + +TF S LS  +     + G QLH  +I        +V NA++         
Sbjct: 66  NC-QTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQL 124

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      + +VV+WN MI+ FVQNG  DE  +L  EM   G   DS+T  + L + 
Sbjct: 125 SDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSV 184

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +   +   GK+ H Y+LRHGI  +  ++S LID+Y K   +  A +IF++  S + D   
Sbjct: 185 TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ--STNVDIVV 242

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
             A+I+GY  NGL  +A   FR +LE  ++PN VT+ASVLPAC  +  + LGK+LH   +
Sbjct: 243 CTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANIL 302

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           ++ LD+   VG++++DMY+K G ++ A  +F ++PEK++V +  +I    Q+G  + A+ 
Sbjct: 303 KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAID 362

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM-QQEYKIQPSTEHYCCVADM 659
           LFR M   G+  D ++  A LSAC+    +  G  I   M +  +  +   E    + DM
Sbjct: 363 LFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAES--ALIDM 420

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
            G+ G +  A      + E+  V   W S++ +   HGH E++  +  K+LE    + + 
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEV--SWNSIIAAYGSHGHLEVSLALFHKMLE----DGIQ 474

Query: 720 GYHVLLSNIYAEEGNWENVDK 740
             HV    I +  G+   VDK
Sbjct: 475 PDHVTFLTILSACGHAGQVDK 495



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/564 (28%), Positives = 272/564 (48%), Gaps = 48/564 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V+WN ++ GFV    P  A+ ++  M+     T  ++ T++SVL  C
Sbjct: 26  ARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQ--TKPNSITFASVLSIC 83

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A       G  +H   I C  +    V N+L+ MYS                   + +  
Sbjct: 84  ASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK------------------FGQLS 125

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F+TM   NVV WN +++ +V+     EA   F  M+  G+ P +I+F +  P+++
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                K    ++G +++ G     D+F+ S+ I +Y +      A KIF      +  V 
Sbjct: 186 ESASLKQGKEIHGYILRHGIAL--DVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVC 243

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             +I GYV N    +A+E+F  +LE +++  + VT  S L A + L  L+LG++LHA I+
Sbjct: 244 TAIISGYVLNGLNNDALEIFRWLLE-EKMSPNAVTLASVLPACAGLATLNLGKELHANIL 302

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K+ +     V +A++                    E+D V WN +I+   QNG   E + 
Sbjct: 303 KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAID 362

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYA 456
           L  +M ++G   D V+++A LSA +NL     GK  H+++++     E   ES LIDMY 
Sbjct: 363 LFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYG 422

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +  AR +F+     ++++ +WN++IA Y  +G LE +   F +MLE  + P+ VT 
Sbjct: 423 KCGNLSVARCVFDMMR--EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            ++L AC   G ++ G Q     +  Y +   +     ++D++ ++G +N A      +P
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540

Query: 576 -EKNSVTYTTMILGYGQHGMSERA 598
              +   + T++     HG  E A
Sbjct: 541 FSPDDGVWGTLLGACRVHGNVELA 564



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 225/472 (47%), Gaps = 48/472 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LF+++     V WN +I GFV N    EA LL+S+M  +    S D+ T++S L + 
Sbjct: 127 ALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAG--VSPDSITFASFLPSV 184

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E+ +L+ GK +H + +R       F+ ++L+++Y  C        VG+           
Sbjct: 185 TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRD------VGM----------- 227

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CK+F      ++V    I+S YV      +A+  FR +L   + P+ ++  +V PA +
Sbjct: 228 -ACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACA 286

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        ++  ++K G +      V S+ + MYA+ G  D A +IF    E++   W
Sbjct: 287 GLATLNLGKELHANILKHGLD--ERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCW 344

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I    QN  P EAI+LF Q +  + + +D V+  +ALSA + L  L  G+ +H+++I
Sbjct: 345 NAIITNCSQNGKPQEAIDLFRQ-MGREGLSYDCVSISAALSACANLPALHHGKAIHSFMI 403

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V   +A+I                    E++ VSWN++I+A+  +G  +  L 
Sbjct: 404 KGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLA 463

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDM 454
           L ++M + G   D VT   +LSA  +    D G Q    +   +GI    ME Y  ++D+
Sbjct: 464 LFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPAR-MEHYACIVDL 522

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + ++G +  A +   KN     D   W  ++     +G +E A VA R +L+
Sbjct: 523 FGRAGRLNEAFETI-KNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLD 573



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LA Q+F  +     V WN II     N  P EAI L+ QM +     S D  + S+
Sbjct: 324 GRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREG--LSYDCVSISA 381

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L ACA    L  GKA+H   I+   +   F  ++L++MY  C                 
Sbjct: 382 ALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC----------------- 424

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                +   VFD MR +N V+WN+I++ Y        ++  F  ML  GI+P  ++F+ +
Sbjct: 425 -GNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTI 483

Query: 233 FPALSSLG 240
             A    G
Sbjct: 484 LSACGHAG 491


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 245/726 (33%), Positives = 398/726 (54%), Gaps = 51/726 (7%)

Query: 95   QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS-LLNMYS 153
            ++ + S  +  D   YSS+L+ CAE + L+ GK VH   I     P   V  + L+ MY 
Sbjct: 439  ELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVH-SVISSNGIPIEGVLGAKLVFMYV 497

Query: 154  TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN-VVAWNTIVSWYVKTERYVEAVR 212
            +C +  +                    ++FD +   N V  WN ++S Y K   Y E++ 
Sbjct: 498  SCGALREGR------------------RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIY 539

Query: 213  QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
             F+ M ++GI  ++ +F  +    ++LG       ++G + KLG    N   V +S I  
Sbjct: 540  LFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNT--VVNSLIAT 597

Query: 273  YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
            Y + G  D A K+FD   +R+   WN+MI G V N     A+E FVQ+L L  +  D  T
Sbjct: 598  YFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLIL-RVGVDLAT 656

Query: 333  FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------------- 372
             +++++A + +  L LG+ LH   +K   +  V+  N ++                    
Sbjct: 657  LVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMG 716

Query: 373  ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            ++ VVSW ++I+A+V+ GL D+ + L YEM+ +G   D  ++T++L A +   + D G+ 
Sbjct: 717  QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRD 776

Query: 433  THAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
             H Y+ ++ +     + + L+DMYAK G ++ A  +F +     +D  +WN MI GY++N
Sbjct: 777  VHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPV--KDIVSWNTMIGGYSKN 834

Query: 492  GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
             L  EA   F +M +    P+ +T+A +LPAC  +  +E+G+ +HG  +R      + V 
Sbjct: 835  SLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVA 893

Query: 552  TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             +LIDMY K G + +A  +F  IPEK+ +T+T MI G G HG+   A++ F+ M+  GI+
Sbjct: 894  NALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIK 953

Query: 612  PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
            PD ITF ++L ACS++GL++EG   F+ M  E  ++P  EHY C+ D+L R G + +AY 
Sbjct: 954  PDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYN 1013

Query: 672  FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
             ++ +  + +   IWG+LL  CR+H   ELAE VA+ + E++  N+  GY+VLL+NIYAE
Sbjct: 1014 LIETMPIKPDAT-IWGALLCGCRIHHDVELAEKVAEHVFELEPDNA--GYYVLLANIYAE 1070

Query: 732  EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
               WE V K+R+ + +RGL+K  GCSWI+V G    F S D  HPQ+  I+ +L  L ++
Sbjct: 1071 AEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIK 1130

Query: 792  MRNAGN 797
            M+N G+
Sbjct: 1131 MKNEGH 1136



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 216/480 (45%), Gaps = 71/480 (14%)

Query: 42   IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
            + S ++   + G    A +LFD +     V WN++I G V N   + A+  + QM     
Sbjct: 591  VNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQML--IL 648

Query: 102  YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLD 160
                D  T  + + ACA   +L +G+A+H   ++ CFS    F  N+LL+MYS C +  D
Sbjct: 649  RVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF-NNTLLDMYSKCGNLND 707

Query: 161  AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            A                   + F+ M ++ VV+W ++++ YV+   Y +A+R F  M   
Sbjct: 708  A------------------IQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESK 749

Query: 221  GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            G+ P   S  +V  A +          V+  + K  +     L V+++ + MYA+ G  +
Sbjct: 750  GVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK--NNMALCLPVSNALMDMYAKCGSME 807

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             A  +F     ++   WNTMIGGY +N+ P EA++LF ++ +  E   D +T    L A 
Sbjct: 808  EAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK--ESRPDGITMACLLPAC 865

Query: 341  SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
              L  L++G+ +H  I++N  +  + V NA+I                    E+D+++W 
Sbjct: 866  GSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWT 925

Query: 381  TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
             MIS    +GL +E +    +M+  G   D +T T++L A S           H+ LL  
Sbjct: 926  VMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACS-----------HSGLLNE 974

Query: 441  GIHF-----------EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            G  F             +E Y  ++D+ A++G +  A  + E       D   W A++ G
Sbjct: 975  GWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPI-KPDATIWGALLCG 1033


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 251/772 (32%), Positives = 408/772 (52%), Gaps = 52/772 (6%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           IC  G P  +R +FD +       WN ++ G+V N L  EAI  + ++   + +   DN+
Sbjct: 155 IC--GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP-DNF 211

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+  ++KAC    ++ +GK+VH   ++       FV N+++ +Y  C             
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC------------- 258

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPST 226
                   D   ++FD M  +N+++WN+++  + +   ++EA R FR +L  G  + P  
Sbjct: 259 -----GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV 313

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            + V + P  S  G+     V++G+ VKLG   V++L V ++ I MY++ GC   A  +F
Sbjct: 314 ATMVTLLPVCSGEGNVDVGMVIHGMAVKLG--LVHELMVCNALIDMYSKCGCLSEAAILF 371

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQE 345
                ++   WN+MIG Y +     E  +L  ++   +E++  ++VT L+ L A  +  E
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L   + LH Y +++      ++ NA I                     + V SWN +I  
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
             QNG   + L   +EM + G + D  ++ +LL A   L     GK+ H ++LR+G+   
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN 551

Query: 446 GMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
              +  L+ +Y         R  FE+   GD++   WNAM++GY+QN L  EA   FRQM
Sbjct: 552 SFVAVSLLSLYFHCSKPFYGRTYFER--MGDKNSVCWNAMLSGYSQNELPNEALSLFRQM 609

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L   + P+ + IAS+L AC+ +  + LGK++H F+++  L ++ FV  SL+DMY+KSG +
Sbjct: 610 LSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFL 669

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
            ++  +F ++  K   ++  MI G+G HG   +A+ LF  MK    +PD  TF+ VL AC
Sbjct: 670 GHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +AGLV EGL     MQ  YK++P  EHY CV DMLGR G++ EA  F+ E+ EE +  +
Sbjct: 730 CHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDA-K 788

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW SLL S   +   E+ E  A+KLL ++  N    Y +LLSN+YA  G W+ V  VR++
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEA-NKADSY-ILLSNLYATAGKWDVVRMVRQK 846

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M++  L+K+VGCSWI++ G V  F + +  +P S +I +M  RL  ++   G
Sbjct: 847 MKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 898



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 291/619 (47%), Gaps = 57/619 (9%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS-LLNMYSTCLSSLDAEMVGLKYVEV 171
           +L+ C + +N+ IG+ +             FV N+ L+ MYS C   L++ +V       
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLV------- 165

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                      FD +  +N+  WN +VS YV+ E Y EA+  F  ++ +   +P   +F 
Sbjct: 166 -----------FDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFP 214

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A +   D      V+G+ VK+G   + DLFV ++ I +Y + G  D A ++FD   
Sbjct: 215 CLIKACTGKCDIHLGKSVHGMAVKMG--LIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-DEIVFDDVTFLSALSAVSQLQELDLG 349
           E+N   WN++I G+ +N   +EA   F  +LE  D ++ D  T ++ L   S    +D+G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
             +H   +K  +   ++V NA+I+                    + VVSWN+MI A+ + 
Sbjct: 333 MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSRE 392

Query: 390 GLDDEGLMLVYEM--QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EG 446
           G   E   L+ +M  +++   ++ VT+  LL A          +  H Y LRH   + E 
Sbjct: 393 GFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL 452

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + +  I  YAK G +  A  +F   ++  +  ++WNA+I G+ QNG   +A   + +M  
Sbjct: 453 INNAFIAAYAKCGSLVFAEHVFFGMNT--KSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  +I S+L AC  +G ++ GK++HGF +R  L+ N FV  SL+ +Y       Y
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
               F ++ +KNSV +  M+ GY Q+ +   ALSLFR M   G+EPD I   ++L ACS 
Sbjct: 571 GRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 627 A---GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
               GL  E +  F L      +       C + DM  + G +  +      L   G  +
Sbjct: 631 LSALGLGKE-VHCFALKNS---LMEDNFVACSLMDMYAKSGFLGHSQRIFNRL--NGKEV 684

Query: 684 EIWGSLLGSCRLHGHSELA 702
             W  ++    +HG    A
Sbjct: 685 ASWNVMITGFGVHGQGNKA 703



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 5/202 (2%)

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVF 549
           NG L+    A++    +++      +  +L  C    N+E+G++L     +      +  
Sbjct: 85  NGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFV 144

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           + T LI MYS  G    +  VF ++  KN   +  ++ GY ++ + + A+  F  +    
Sbjct: 145 LNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204

Query: 610 -IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
             +PD  TF  ++ AC+    +  G  +  +  +   I         +A + G+ G + E
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIA-LYGKCGFLDE 263

Query: 669 AYEFVKELGEEGNVLEIWGSLL 690
           A E   ++ E+   L  W SL+
Sbjct: 264 AVELFDKMPEQN--LISWNSLI 283


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/809 (33%), Positives = 436/809 (53%), Gaps = 56/809 (6%)

Query: 13  PPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSK---ICQEGRPHLARQLFDSITRPT 69
           P   A+    Q+ QIH+         + T+ SR+     +C+  +      LF  +    
Sbjct: 84  PNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKD--VGNLFCRLQLCY 141

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
           ++ WN +I GF        A++ + +M  S+   + D YT+  V+KAC    N+ + K V
Sbjct: 142 SLPWNWLIRGFSMLGCFDFALMFFFRMLGSN--VAPDKYTFPYVIKACGGLNNVPLCKMV 199

Query: 130 HCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           H    R    +   F+ +SL+ +Y+      DA             KY     +FD +  
Sbjct: 200 H-ELARSMGFHMDLFIGSSLIKLYTDNGYIHDA-------------KY-----LFDELPV 240

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+ + WN +++ YVK   +  A+  F+ M    ++P+++SFV +    ++ G  ++   +
Sbjct: 241 RDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQL 300

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +GL+++ G E  +D  VA++ I MY++ G    ARKIFD   + +T  WN +I GYVQN 
Sbjct: 301 HGLVIRSGFE--SDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              EA+ LF + +    +  D +TF S L +V +   L   +++H+YI+++ V   V + 
Sbjct: 359 FTDEAVALF-KAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLK 417

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A+++                     DV     MIS +V NGL+ E L L   + ++G +
Sbjct: 418 SALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMV 477

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQI 467
            + +T+ ++L A + L +  +GK+ H  +L+ G+ +   + S +  MYAKSG +  A Q 
Sbjct: 478 PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQF 537

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F +     +D   WN MI  ++QNG  E A   FRQM       + V++++ L AC    
Sbjct: 538 FRRMPV--KDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYP 595

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            +  GK+LH F +R     + FV ++LIDMYSK G +  A +VF  +  KN V++ ++I 
Sbjct: 596 ALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIA 655

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            YG HG     L LF  M   GI+PD +TF+ ++SAC +AGLVDEG+  F  M +EY I 
Sbjct: 656 AYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGIC 715

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
              EH+ C+ D+ GR G++ EA++ +K +    +    WGSLLG+CRLHG+ ELA++ +K
Sbjct: 716 ARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDA-GTWGSLLGACRLHGNVELAKLASK 774

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            L+E+D  NS  GY+VLLSN++A  G WE+V KVR  M+E+G++K  G SWIDV G  + 
Sbjct: 775 HLVELDPNNS--GYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHM 832

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F++ D  HPQS +IY +L+ L +E+R  G
Sbjct: 833 FSAADGCHPQSVEIYLILKNLLLELRKHG 861


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 238/638 (37%), Positives = 373/638 (58%), Gaps = 36/638 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGD 241
           FD + +++V AWN+++S YV    + EA+  F +++L   IRP   +F  V  A  +L D
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    ++    KLG ++  ++FVA+S I MY+  G    AR +FD+   R+   WN MI
Sbjct: 234 GRK---IHCWAFKLGFQW--NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            G +QN +  +A+++  + + L+ I  + VT +S L    QL ++     +H Y+IK+ +
Sbjct: 289 SGLIQNGNAAQALDVLDE-MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + V NA+I                      DVVSWN++I+A+ QN           +
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK 407

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSG 459
           MQ  GF  D +T+ +L S  +  R+    +  H +++R G   E   + + ++DMYAK G
Sbjct: 408 MQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLG 467

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIAS 518
           L+ +A ++FE      +D  +WN +I GY QNGL  EA   ++ M E   + PN  T  S
Sbjct: 468 LLDSAHKVFEIIPV--KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +LPA   +G ++ G ++HG  I+  L  +VFV T LID+Y K G +  A ++F ++P+++
Sbjct: 526 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           SVT+  +I  +G HG +E+ L LF  M   G++PD +TFV++LSACS++G V+EG   F 
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM QEY I+PS +HY C+ D+LGR G +  AY+F+K++  + +   IWG+LLG+CR+HG+
Sbjct: 646 LM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDA-SIWGALLGACRIHGN 703

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            EL +  + +L E+D++N   GY+VLLSNIYA  G WE VDKVR   RERGL+K  G S 
Sbjct: 704 IELGKFASDRLFEVDSKNV--GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWST 761

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           I+V   V+ F + +Q HP+  +IYE L  L  +M++ G
Sbjct: 762 IEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/542 (28%), Positives = 278/542 (51%), Gaps = 45/542 (8%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           A  ++ LLV  G   V  +F+++  + +YA LG    +R  FD   +++   WN+MI  Y
Sbjct: 135 AKCLHALLVVAGK--VQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAY 192

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           V N H  EAI  F Q+L + EI  D  TF   L A   L +   G+++H +  K      
Sbjct: 193 VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWN 249

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V  ++I                     RD+ SWN MIS  +QNG   + L ++ EM+ 
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           +G  ++ VTV ++L     L +       H Y+++HG+ F+  + + LI+MYAK G ++ 
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR+ F++      D  +WN++IA Y QN     A   F +M  +   P+++T+ S+    
Sbjct: 370 ARKAFQQ--MFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIV 427

Query: 524 NPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
               + +  + +HGF +R   L ++V +G +++DMY+K G+++ A  VF  IP K+ +++
Sbjct: 428 AQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISW 487

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
            T+I GY Q+G++  A+ +++ M+ C  I P+  T+V++L A ++ G + +G++I   + 
Sbjct: 488 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVI 547

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           +   +        C+ D+ G+ G++V+A     ++ +E +V   W +++    +HGH+E 
Sbjct: 548 KT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV--TWNAIISCHGIHGHAEK 604

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNI----YAEEGNWENVDKVRKEMRERGLR---KEV 754
              +  ++L+   +     +  LLS      + EEG W       + M+E G++   K  
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLMQEYGIKPSLKHY 659

Query: 755 GC 756
           GC
Sbjct: 660 GC 661



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 316/679 (46%), Gaps = 92/679 (13%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           +H+L     K+++  I +RL  +    G   L+R  FD I +     WN++I  +V N  
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
            +EAI  + Q+   S     D YT+  VLKAC     L  G+ +HC   +     + FV 
Sbjct: 198 FHEAIGCFYQLLLVSEIRP-DFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVA 253

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            SL++MYS                   +    +   +FD M  R++ +WN ++S  ++  
Sbjct: 254 ASLIHMYSR------------------FGFTGIARSLFDDMPFRDMGSWNAMISGLIQNG 295

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
              +A+     M   GI+ + ++ V++ P    LGD  +A +++  ++K G E+  DLFV
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF--DLFV 353

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           +++ I MYA+ G  + ARK F      +   WN++I  Y QN+ PV A   FV+ ++L+ 
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK-MQLNG 412

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVIE----------- 373
              D +T +S  S V+Q ++    + +H +I+ + ++   V++ NAV++           
Sbjct: 413 FQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSA 472

Query: 374 ---------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAAS 422
                    +DV+SWNT+I+ + QNGL  E +  VY+M ++   I  +  T  ++L A +
Sbjct: 473 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIE-VYKMMEECKEIIPNQGTWVSILPAYA 531

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           ++     G + H  +++  +H +  + + LID+Y K G +  A  +F +         TW
Sbjct: 532 HVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ--VPQESSVTW 589

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NA+I+ +  +G  E+    F +ML+  V P+ VT  S+L AC+  G +E GK        
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
           Y +  ++     ++D+  ++G +  A +    +P                          
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP-------------------------- 683

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADML 660
                   ++PDA  + A+L AC   G ++ G    D L + + K   +  +Y  ++++ 
Sbjct: 684 --------LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSK---NVGYYVLLSNIY 732

Query: 661 GRVGKVVEAYEFVKELGEE 679
             VGK  E  + V+ L  E
Sbjct: 733 ANVGK-WEGVDKVRSLARE 750


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/772 (32%), Positives = 407/772 (52%), Gaps = 52/772 (6%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           IC  G P  +R +FD +       WN ++ G+V N L  EAI  + ++   + +   DN+
Sbjct: 155 IC--GYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP-DNF 211

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+  ++KAC    ++ +GK+VH   ++       FV N+++ +Y  C             
Sbjct: 212 TFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC------------- 258

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPST 226
                   D   ++FD M  +N+++WN+++  + +   ++EA R FR +L  G  + P  
Sbjct: 259 -----GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDV 313

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            + V + P  S  G+     V++G+ VKLG   V++L V ++ I MY++ GC   A  +F
Sbjct: 314 ATMVTLLPVCSGEGNVDVGMVIHGMAVKLG--LVHELMVCNALIDMYSKCGCLSEAAILF 371

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQE 345
                ++   WN+MIG Y +     E  +L  ++   +E++  ++VT L+ L A  +  E
Sbjct: 372 RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L   + LH Y +++      ++ NA I                     + V SWN +I  
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
             QNG   + L   +EM + G + D  ++ +LL A   L     GK+ H ++LR+G+   
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN 551

Query: 446 GMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
              +  L+ +Y         R  FE    GD++   WNAM++GY+QN L  EA   FRQM
Sbjct: 552 SFVAVSLLSLYFHCSKPFYGRTYFET--MGDKNSVCWNAMLSGYSQNELPNEALSLFRQM 609

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L   + P+ + IAS+L AC+ +  + LGK++H F+++  L ++ FV  SL+DMY+KSG +
Sbjct: 610 LSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFL 669

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
            ++  +F ++  K   ++  MI G+G HG   +A+ LF  MK    +PD  TF+ VL AC
Sbjct: 670 GHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +AGLV EGL     MQ  YK++P  EHY CV DMLGR G++ EA  F+ E+ EE +  +
Sbjct: 730 CHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDA-K 788

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW SLL S   +   E+ E  A+KLL ++  N    Y +LLSN+YA  G W+ V  VR++
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEA-NKADSY-ILLSNLYATAGKWDVVRMVRQK 846

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M++  L+K+VGCSWI++ G V  F + +  +P S +I +M  RL  ++   G
Sbjct: 847 MKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIG 898



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 290/619 (46%), Gaps = 57/619 (9%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS-LLNMYSTCLSSLDAEMVGLKYVEV 171
           +L+ C + +N+ IG+ +             FV N+ L+ MYS C   L++ +V       
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLV------- 165

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                      FD +  +N+  WN +VS YV+ E Y EA+  F  ++ +   +P   +F 
Sbjct: 166 -----------FDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFP 214

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A +   D      V+G+ VK+G   + DLFV ++ I +Y + G  D A ++FD   
Sbjct: 215 CLIKACTGKCDIHLGKSVHGMAVKMG--LIMDLFVGNAMIALYGKCGFLDEAVELFDKMP 272

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-DEIVFDDVTFLSALSAVSQLQELDLG 349
           E+N   WN++I G+ +N   +EA   F  +LE  D ++ D  T ++ L   S    +D+G
Sbjct: 273 EQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVG 332

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
             +H   +K  +   ++V NA+I+                    + VVSWN+MI A+ + 
Sbjct: 333 MVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSRE 392

Query: 390 GLDDEGLMLVYEM--QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EG 446
           G   E   L+ +M  +++   ++ VT+  LL A          +  H Y LRH   + E 
Sbjct: 393 GFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL 452

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + +  I  YAK G +  A  +F   ++  +  ++WNA+I G+ QNG   +A   + +M  
Sbjct: 453 INNAFIAAYAKCGSLVFAEHVFFGMNT--KSVSSWNAVIGGHAQNGDPIKALDFYFEMTR 510

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  +I S+L AC  +G ++ GK++HGF +R  L+ N FV  SL+ +Y       Y
Sbjct: 511 LGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFY 570

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
               F  + +KNSV +  M+ GY Q+ +   ALSLFR M   G+EPD I   ++L ACS 
Sbjct: 571 GRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQ 630

Query: 627 A---GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
               GL  E +  F L      +       C + DM  + G +  +      L   G  +
Sbjct: 631 LSALGLGKE-VHCFALKNS---LMEDNFVACSLMDMYAKSGFLGHSQRIFNRL--NGKEV 684

Query: 684 EIWGSLLGSCRLHGHSELA 702
             W  ++    +HG    A
Sbjct: 685 ASWNVMITGFGVHGQGNKA 703



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 87/202 (43%), Gaps = 5/202 (2%)

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVF 549
           NG L+    A++    +++      +  +L  C    N+E+G++L     +      +  
Sbjct: 85  NGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFV 144

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           + T LI MYS  G    +  VF ++  KN   +  ++ GY ++ + + A+  F  +    
Sbjct: 145 LNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVT 204

Query: 610 -IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
             +PD  TF  ++ AC+    +  G  +  +  +   I         +A + G+ G + E
Sbjct: 205 EFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIA-LYGKCGFLDE 263

Query: 669 AYEFVKELGEEGNVLEIWGSLL 690
           A E   ++ E+   L  W SL+
Sbjct: 264 AVELFDKMPEQN--LISWNSLI 283


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/761 (32%), Positives = 399/761 (52%), Gaps = 50/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F  + R   + WN++I  +       +A  L+ +M+ +      +  TY S+L AC
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP--NKITYISILTAC 138

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H   I+        V NSLL+MY  C     A                
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR--------------- 183

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  +  R+VV++NT++  Y +     E +  F  M   GI P  ++++N+  A +
Sbjct: 184 ---QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFT 240

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +         ++ L V+ G    +D+ V ++ + M    G  D A++ F    +R+  V+
Sbjct: 241 TPSMLDEGKRIHKLTVEEGLN--SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVY 298

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I    Q+ H VEA E + + +  D +  +  T+LS L+A S  + L+ G+ +H++I 
Sbjct: 299 NALIAALAQHGHNVEAFEQYYR-MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           ++  +  V + NA+I                    +RD++SWN +I+ + +     E + 
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMR 417

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
           L  +MQ +G     VT   LLSA +N      GK  H  +LR GI   G + + L++MY 
Sbjct: 418 LYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYR 477

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +  A+ +FE   +  RD  +WN+MIAG+ Q+G  E A+  F++M    + P+ +T 
Sbjct: 478 RCGSLMEAQNVFEGTQA--RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITF 535

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL  C     +ELGKQ+HG      L  +V +G +LI+MY + G +  A NVF  +  
Sbjct: 536 ASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH 595

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE-PDAITFVAVLSACSYAGLVDEGLQ 635
           ++ +++T MI G    G   +A+ LF  M+  G   PD  TF ++LSAC++AGLV EG Q
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQ 655

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           IF  M+ EY + P+ EHY C+  +LGR  +  EA   + ++    +   +W +LLG+CR+
Sbjct: 656 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDA-AVWETLLGACRI 714

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG+  LAE  A   L+++ RN  P  ++LLSN+YA  G W++V K+R+ M  RG+RKE G
Sbjct: 715 HGNIALAEHAANNALKLNARN--PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 772

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SWI+V   ++ F + D+ HP++ +IY  L+RL++EM  AG
Sbjct: 773 RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 813



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/617 (28%), Positives = 294/617 (47%), Gaps = 49/617 (7%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           T  D  TY ++L+ C   R L   K +H   +     P  F+ N L+NMY  C S LDA 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                             +VF  M RR+V++WN+++S Y +     +A + F  M   G 
Sbjct: 83  ------------------QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGF 124

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P+ I+++++  A  S  + ++   ++  ++K G  Y  D  V +S + MY + G    A
Sbjct: 125 IPNKITYISILTACYSPAELENGKKIHSQIIKAG--YQRDPRVQNSLLSMYGKCGDLPRA 182

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++F     R+   +NTM+G Y Q  +  E + LF Q +  + I  D VT+++ L A + 
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQ-MSSEGISPDKVTYINLLDAFTT 241

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
              LD G+++H   ++  +   + V  A++                    +RDVV +N +
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+A  Q+G + E     Y M+  G  ++  T  ++L+A S  +  + GK  H+++   G 
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG- 360

Query: 443 HFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           H   ++  + LI MYA+ G +  AR++F       RD  +WNA+IAGY +     EA   
Sbjct: 361 HSSDVQIGNALISMYARCGDLPKARELFYTMPK--RDLISWNAIIAGYARREDRGEAMRL 418

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           ++QM    V P  VT   +L AC        GK +H   +R  +  N  +  +L++MY +
Sbjct: 419 YKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRR 478

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  A NVF     ++ +++ +MI G+ QHG  E A  LF+ M+   +EPD ITF +V
Sbjct: 479 CGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASV 538

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LS C     ++ G QI   +  E  +Q        + +M  R G + +A      L +  
Sbjct: 539 LSGCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHR 596

Query: 681 NVLEIWGSLLGSCRLHG 697
           +V+  W +++G C   G
Sbjct: 597 DVMS-WTAMIGGCADQG 612



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 6/291 (2%)

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T  ALL   +  R     K+ HA ++  G+  +  + + LI+MY K   +  A Q+F
Sbjct: 26  DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++     RD  +WN++I+ Y Q G  ++AF  F +M      PN +T  S+L AC     
Sbjct: 86  KEMPR--RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E GK++H   I+    ++  V  SL+ MY K G +  A  VFA I  ++ V+Y TM+  
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y Q    +  L LF  M   GI PD +T++ +L A +   ++DEG +I  L  +E  +  
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNS 262

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
                  +  M  R G V  A +  K + +   V  ++ +L+ +   HGH+
Sbjct: 263 DIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV--VYNALIAALAQHGHN 311


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 246/785 (31%), Positives = 424/785 (54%), Gaps = 55/785 (7%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
           L   T+ + ++   Q G    ARQ+++ +  T  T   WN +++G+V      EA+ L  
Sbjct: 174 LDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLR 233

Query: 95  QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
           +M++     +    T   +L +C     L  G+ +H   ++        V N +LNMY+ 
Sbjct: 234 EMQQHG--LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAK 291

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
           C S  +A                   +VFD M  ++VV+W  I+  Y        A   F
Sbjct: 292 CGSIHEAR------------------EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIF 333

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           + M + G+ P+ I+++NV  A S     K    V+  ++  G E  +DL V ++ + MYA
Sbjct: 334 QKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE--SDLAVGTALVKMYA 391

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G +   R++F+  + R+   WNTMIGG  +  +  EA E++ Q ++ + ++ + +T++
Sbjct: 392 KCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQ-MQREGMMPNKITYV 450

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
             L+A      L  G+++H+ ++K+     + V NA+I                     +
Sbjct: 451 ILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK 510

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D++SW  MI    ++GL  E L +  +MQ+ G   + VT T++L+A S+    D G++ H
Sbjct: 511 DIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIH 570

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
             ++  G+  +  + + L++MY+  G +K ARQ+F++     RD   +NAMI GY  + L
Sbjct: 571 QQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ--RDIVAYNAMIGGYAAHNL 628

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVG 551
            +EA   F ++ E  + P+ VT  ++L AC   G++E  K++H   ++  YL D ++  G
Sbjct: 629 GKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSL--G 686

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +L+  Y+K G  + A  VF K+ ++N +++  +I G  QHG  +  L LF  MK  GI+
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIK 746

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +TFV++LSACS+AGL++EG + F  M +++ I P+ EHY C+ D+LGR G++ E   
Sbjct: 747 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA 806

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            +K +  + N   IWG+LLG+CR+HG+  +AE  A+  L++D  N+    +V LS++YA 
Sbjct: 807 LIKTMPFQANT-RIWGALLGACRIHGNVPVAERAAESSLKLDPDNA--AVYVALSHMYAA 863

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G W++  K+RK M +RG+ KE G SWI+VG  ++ F ++D+ HP+S KIY  L++L   
Sbjct: 864 AGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHA 923

Query: 792 MRNAG 796
           M+  G
Sbjct: 924 MKMEG 928



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 314/628 (50%), Gaps = 54/628 (8%)

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
           ++ +   SCD   Y  +LK C E ++L  G+ VH H I+  +   ++  N+L+NMY  C 
Sbjct: 134 QQGARVNSCD---YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCG 190

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
           S  +A  V  K    +                R V +WN +V  YV+     EA++  R 
Sbjct: 191 SIEEARQVWNKLNHTE----------------RTVHSWNAMVVGYVQYGYIEEALKLLRE 234

Query: 217 MLRMGI---RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           M + G+   R +T+  ++   + S+L   +   V       + +  + D+ VA+  + MY
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHV-----EAMKARLLFDVNVANCILNMY 289

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+ G    AR++FD    ++   W  +IGGY    H   A E+F Q ++ + +V + +T+
Sbjct: 290 AKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIF-QKMQQEGVVPNRITY 348

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIE 373
           ++ L+A S    L  G+ +H++I+         V   ++              V   ++ 
Sbjct: 349 INVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN 408

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD+++WNTMI    + G  +E   + ++MQ++G M + +T   LL+A  N      G++ 
Sbjct: 409 RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI 468

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H+ +++ G  F+  +++ LI MYA+ G IK AR +F  N    +D  +W AMI G  ++G
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLF--NKMVRKDIISWTAMIGGLAKSG 526

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           L  EA   F+ M +  + PN VT  S+L AC+    ++ G+++H   I   L  +  V  
Sbjct: 527 LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVAN 586

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L++MYS  G +  A  VF ++ +++ V Y  MI GY  H + + AL LF  ++  G++P
Sbjct: 587 TLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP 646

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D +T++ +L+AC+ +G ++   +I  L+ ++  +  ++     V+    + G   +A   
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVS-TYAKCGSFSDALLV 705

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSE 700
             ++ +  NV+  W +++G C  HG  +
Sbjct: 706 FDKMMKR-NVIS-WNAIIGGCAQHGRGQ 731



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 168/330 (50%), Gaps = 25/330 (7%)

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
           VQ L+      +   ++  L    ++++L  G+++H +II++   L    +NA+I     
Sbjct: 129 VQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQ 188

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                            ER V SWN M+  +VQ G  +E L L+ EMQ+ G  +   T  
Sbjct: 189 CGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTM 248

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
            LLS+  +    + G++ H   ++  + F+  + + +++MYAK G I  AR++F+K ++ 
Sbjct: 249 RLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMET- 307

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            +   +W  +I GY   G  E AF  F++M +  V PN +T  +VL A +    ++ GK 
Sbjct: 308 -KSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKT 366

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H   +    + ++ VGT+L+ MY+K G       VF K+  ++ + + TMI G  + G 
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSAC 624
            E A  ++  M+  G+ P+ IT+V +L+AC
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNAC 456



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 132/234 (56%), Gaps = 1/234 (0%)

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYL 451
           D  + +V  +Q+QG  ++S     +L     +++   G++ H ++++H    +    + L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I+MY + G I+ ARQ++ K +  +R   +WNAM+ GY Q G +EEA    R+M +H +  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
              T   +L +C     +E G+++H  +++  L  +V V   +++MY+K G I+ A  VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            K+  K+ V++T +I GY   G SE A  +F+ M+  G+ P+ IT++ VL+A S
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI--PE 576
           +L  C  + ++  G+++H   I++    + +   +LI+MY + G I  A  V+ K+   E
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTE 206

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +   ++  M++GY Q+G  E AL L R M+  G+     T + +LS+C     ++ G +I
Sbjct: 207 RTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREI 266

Query: 637 -FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             + M+       +  +  C+ +M  + G + EA E   ++  E   +  W  ++G    
Sbjct: 267 HVEAMKARLLFDVNVAN--CILNMYAKCGSIHEAREVFDKM--ETKSVVSWTIIIGGYAD 322

Query: 696 HGHSELAEVVAKKL 709
            GHSE+A  + +K+
Sbjct: 323 CGHSEIAFEIFQKM 336


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/779 (31%), Positives = 420/779 (53%), Gaps = 51/779 (6%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSIT--RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T+ + ++   Q G    ARQ++  ++    T   WN +++G++      +A+ L  QM++
Sbjct: 60  TVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQ 119

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                + D  T  S L +C     L  G+ +H   ++        V N +LNMY+ C S 
Sbjct: 120 HG--LAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSI 177

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            +A                   +VFD M +++VV+W   +  Y    R   A   F+ M 
Sbjct: 178 EEAR------------------EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKME 219

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           + G+ P+ I++++V  A SS    K    V+  ++  G E  +D  V ++ + MYA+ G 
Sbjct: 220 QEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHE--SDTAVGTALVKMYAKCGS 277

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           +   R++F+  + R+   WNTMIGG  +  +  EA E++ Q ++ + ++ + +T++  L+
Sbjct: 278 YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ-MQREGVMPNKITYVILLN 336

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVS 378
           A      L  G+++H+ + K      + V NA+I                     +DV+S
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVIS 396

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W  MI    ++G   E L +  EMQ+ G   + VT T++L+A S+    + G++ H  ++
Sbjct: 397 WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV 456

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
             G+  +  + + L++MY+  G +K ARQ+F++     RD   +NAMI GY  + L +EA
Sbjct: 457 EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ--RDIVAYNAMIGGYAAHNLGKEA 514

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F ++ E  + P+ VT  ++L AC   G++E  +++H    +     +  VG +L+  
Sbjct: 515 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVST 574

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G  + A+ VF K+ ++N +++  +I G  QHG  + AL LF  MK  G++PD +TF
Sbjct: 575 YAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTF 634

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V++LSACS+AGL++EG + F  M Q++ I P+ EHY C+ D+LGR G++ EA   +K + 
Sbjct: 635 VSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMP 694

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + N   IWG+LLG+CR+HG+  +AE  A+  L++D  N++   +V LS++YA  G W++
Sbjct: 695 FQANT-RIWGALLGACRIHGNVPVAERAAESSLKLDLDNAV--VYVALSHMYAAAGMWDS 751

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             K+RK M +RG+ KE G SWI VG  ++ F ++D+ HPQS KIY  L+RL   M+  G
Sbjct: 752 AAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKG 810



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 171/616 (27%), Positives = 308/616 (50%), Gaps = 49/616 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLK 167
           Y  +LK C E ++L  G+ VH H I+  + P ++  N+L+NMY  C S  +A  V   L 
Sbjct: 26  YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLS 85

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
           Y+E                  R V +WN +V  Y++     +A++  R M + G+ P   
Sbjct: 86  YME------------------RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRT 127

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + ++   +  S G  +    ++   ++ G  +  D+ VA+  + MYA+ G  + AR++FD
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQAGLLF--DVKVANCILNMYAKCGSIEEAREVFD 185

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              +++   W   IGGY        A E+F Q +E + +V + +T++S L+A S    L 
Sbjct: 186 KMEKKSVVSWTITIGGYADCGRSETAFEIF-QKMEQEGVVPNRITYISVLNAFSSPAALK 244

Query: 348 LGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFV 387
            G+ +H+ I+         V   ++              V   ++ RD+++WNTMI    
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           + G  +E   +  +MQ++G M + +T   LL+A  N      GK+ H+ + + G   + G
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +++ LI MY++ G IK AR +F+K     +D  +W AMI G  ++G   EA   +++M +
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVR--KDVISWTAMIGGLAKSGFGAEALTVYQEMQQ 422

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V PN VT  S+L AC+    +E G+++H   +   L  +  VG +L++MYS  G +  
Sbjct: 423 AGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKD 482

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF ++ +++ V Y  MI GY  H + + AL LF  ++  G++PD +T++ +L+AC+ 
Sbjct: 483 ARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACAN 542

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +G ++   +I  L+++      ++     V+    + G   +A   V E   + NV+  W
Sbjct: 543 SGSLEWAREIHTLVRKGGFFSDTSVGNALVS-TYAKCGSFSDA-SIVFEKMTKRNVIS-W 599

Query: 687 GSLLGSCRLHGHSELA 702
            +++G    HG  + A
Sbjct: 600 NAIIGGSAQHGRGQDA 615



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 25/342 (7%)

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
           VQ L+      +   ++  L    ++++L  G+Q+H +II++        +NA+I     
Sbjct: 11  VQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQ 70

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                            ER V SWN M+  ++Q G  ++ L L+ +MQ+ G   D  T+ 
Sbjct: 71  CGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIM 130

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           + LS+  +    + G++ H   ++ G+ F+  + + +++MYAK G I+ AR++F+K +  
Sbjct: 131 SFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK- 189

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            +   +W   I GY   G  E AF  F++M +  V PN +T  SVL A +    ++ GK 
Sbjct: 190 -KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKA 248

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H   +    + +  VGT+L+ MY+K G       VF K+  ++ + + TMI G  + G 
Sbjct: 249 VHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGY 308

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            E A  ++  M+  G+ P+ IT+V +L+AC  +  +  G +I
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEI 350



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 137/234 (58%), Gaps = 1/234 (0%)

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEGMESYL 451
           D  + +V  +Q+QG  ++S     +L     +++   G+Q H ++++H  +  +   + L
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I+MY + G I+ ARQ+++K    +R   +WNAM+ GY Q G +E+A    RQM +H + P
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  TI S L +C   G +E G+++H  +++  L  +V V   +++MY+K G I  A  VF
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            K+ +K+ V++T  I GY   G SE A  +F+ M+  G+ P+ IT+++VL+A S
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFS 238


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/769 (32%), Positives = 410/769 (53%), Gaps = 54/769 (7%)

Query: 58  ARQLFDSITRPTTVI---WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +F S+ R        WN +I GF        A+L Y +M         D +T   V+
Sbjct: 95  AVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVV 154

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K+CA    L +G+ VH        +   +V ++L+ MY+                  D  
Sbjct: 155 KSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYA------------------DAG 196

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
             D   +VFD M  R+ V WN ++  YVK      AV  FR+M   G  P+  +      
Sbjct: 197 LLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLS 256

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             ++  D  S   ++ L VK G E   ++ VA++ + MYA+  C + A ++F      + 
Sbjct: 257 VCAAEADLLSGVQLHTLAVKYGLE--PEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL 314

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI G VQN    +A+ LF   ++   +  D VT  S L A+++L     G+++H 
Sbjct: 315 VTWNGMISGCVQNGLVDDALRLFCD-MQKSGLQPDSVTLASLLPALTELNGFKQGKEIHG 373

Query: 355 YIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDE 394
           YI++N   + V +++A+++                     DVV  +TMIS +V N + + 
Sbjct: 374 YIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEA 433

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYL 451
            + +   +   G   ++V V + L A +++    +G++ H Y+L++   +EG   +ES L
Sbjct: 434 AVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNA--YEGRCYVESAL 491

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY+K G +  +  +F K  +  +D+ TWN+MI+ + QNG  EEA   FRQM+   V  
Sbjct: 492 MDMYSKCGRLDLSHYMFSKMSA--KDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKY 549

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N VTI+S+L AC  +  I  GK++HG  I+  +  ++F  ++LIDMY K G +  A  VF
Sbjct: 550 NNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVF 609

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +PEKN V++ ++I  YG HG+ + ++ L   M+  G + D +TF+A++SAC++AG V 
Sbjct: 610 EHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQ 669

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL++F  M +EY I+P  EH  C+ D+  R GK+ +A +F+ ++  + +   IWG+LL 
Sbjct: 670 EGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDA-GIWGALLH 728

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+H + ELAE+ +++L ++D  N   GY+VL+SNI A  G W+ V K+R+ M+++ ++
Sbjct: 729 ACRVHRNVELAEIASQELFKLDPHNC--GYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQ 786

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTI 800
           K  G SW+DV    + F + D+ HP S +IY  L+ L +E++  GN  +
Sbjct: 787 KIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEGNGNL 835



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 179/631 (28%), Positives = 304/631 (48%), Gaps = 47/631 (7%)

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
           +S+   S+   S   Y   ++L+ C    +L +G  +H          +R V + LL+  
Sbjct: 22  FSETASSATNASPCAYRLLALLRGCVAPSHLPLGLRIH----------ARAVTSGLLDAA 71

Query: 153 STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVE 209
               ++L   +VG+  +     ++     VF ++ R      + WN ++  +     +  
Sbjct: 72  GPGPAALQTRLVGMYVLA---RRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRL 128

Query: 210 AVRQFRMMLRM--GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           AV  +  M       RP   +   V  + ++LG      +V+     LG +   D++V S
Sbjct: 129 AVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLD--RDMYVGS 186

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + I MYA+ G  D AR++FD   ER+  +WN M+ GYV+      A+ LF +V+      
Sbjct: 187 ALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLF-RVMRASGCD 245

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------- 372
            +  T    LS  +   +L  G QLH   +K  +   V V N ++               
Sbjct: 246 PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRL 305

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                  D+V+WN MIS  VQNGL D+ L L  +MQK G   DSVT+ +LL A + L   
Sbjct: 306 FGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGF 365

Query: 428 DVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             GK+ H Y++R+  H +  + S L+D+Y K   ++ A+ +F+   S   D    + MI+
Sbjct: 366 KQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKS--IDVVIGSTMIS 423

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           GY  N + E A   FR +L   + PN V +AS LPAC  M  + +G++LHG+ ++   + 
Sbjct: 424 GYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEG 483

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
             +V ++L+DMYSK G ++ +  +F+K+  K+ VT+ +MI  + Q+G  E AL LFR M 
Sbjct: 484 RCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMI 543

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
             G++ + +T  ++LSAC+    +  G +I  ++ +   I+        + DM G+ G +
Sbjct: 544 MEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNL 602

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
             A    + + E+  V   W S++ +   HG
Sbjct: 603 ELALRVFEHMPEKNEV--SWNSIISAYGAHG 631



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 187/410 (45%), Gaps = 38/410 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C++ R  +A+ +FD+      VI +T+I G+V N +   A+ ++  +         +   
Sbjct: 397 CRDVR--MAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALG--IKPNAVM 452

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +S L ACA    +RIG+ +H + ++       +V ++L++MYS C              
Sbjct: 453 VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKC-------------- 498

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                + DL   +F  M  ++ V WN+++S + +     EA+  FR M+  G++ + ++ 
Sbjct: 499 ----GRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTI 554

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++  A + L        ++G+++K       DLF  S+ I MY + G  + A ++F++ 
Sbjct: 555 SSILSACAGLPAIYYGKEIHGIIIK--GPIRADLFAESALIDMYGKCGNLELALRVFEHM 612

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   WN++I  Y  +    E+++L   + E +    D VTFL+ +SA +   ++  G
Sbjct: 613 PEKNEVSWNSIISAYGAHGLVKESVDLLCCMQE-EGFKADHVTFLALISACAHAGQVQEG 671

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            +L   + + +           IE  V   + M+  + + G  D+ +  + +M    F  
Sbjct: 672 LRLFRCMTEEY----------HIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMP---FKP 718

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           D+    ALL A    RN ++ +     L +   H  G    + ++ A +G
Sbjct: 719 DAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAG 768


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/764 (32%), Positives = 409/764 (53%), Gaps = 46/764 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+FDS+     + WN+ I G+  N     A+ L+S+M   S  T   + T  SVL AC
Sbjct: 252 AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMW--SEGTEISSVTVLSVLPAC 309

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE     +GK VH + ++          + LL    +  S +D E +G K V +     D
Sbjct: 310 AELGFELVGKVVHGYSMK----------SGLLWDLESVQSGID-EALGSKLVFMYVKCGD 358

Query: 178 L--VCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           +    +VFD M  + NV  WN I+  Y K   + E++  F  M  +GI P   +   +  
Sbjct: 359 MGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLK 418

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            ++ L   +   V +G LVKLG  +     V ++ I  YA+    D A  +FD    ++T
Sbjct: 419 CITCLSCARDGLVAHGYLVKLG--FGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDT 476

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN++I G   N    EAIELFV+ + +     D  T LS L A ++     +G+ +H 
Sbjct: 477 ISWNSVISGCTSNGLNSEAIELFVR-MWMQGHELDSTTLLSVLPACARSHYWFVGRVVHG 535

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
           Y +K  +     + NA++                    +++VVSW  MI+++ + GL D+
Sbjct: 536 YSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDK 595

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLID 453
              L+ EM   G   D   VT++L   +   +   GK  H Y +R+G+     + + L++
Sbjct: 596 VAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALME 655

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY     ++ AR +F+     ++D  +WN +I GY++N    E+F  F  ML     PN 
Sbjct: 656 MYVNCRNMEEARLVFDHVT--NKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNT 712

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+  +LPA   + ++E G+++H +++R    ++ +   +L+DMY K G +  A  +F +
Sbjct: 713 VTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDR 772

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + +KN +++T MI GYG HG  + A++LF  M+G G+EPD  +F A+L AC ++GL  EG
Sbjct: 773 LTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEG 832

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            + F+ M++EYKI+P  +HY C+ D+L   G + EA+EF++ +  E +   IW SLL  C
Sbjct: 833 WKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDS-SIWVSLLHGC 891

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R+H   +LAE VA ++ +++  N+  GY+VLL+NIYAE   WE V K++ ++  RGLR+ 
Sbjct: 892 RIHRDVKLAEKVADRVFKLEPENT--GYYVLLANIYAEAERWEAVKKLKNKIGGRGLREN 949

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
            GCSWI+V G V+ F + ++ HP+ ++I E L+ +A  MR  G+
Sbjct: 950 TGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGH 993



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 254/563 (45%), Gaps = 65/563 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNP--SRFVYNSLLNMYSTCLSSLDAEMVGL 166
           +Y +V++ C E R+L   +  H   +R  +       +   L+  Y  C     A MV  
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMV-- 152

Query: 167 KYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           FD M  R  +V  W +++S Y K   + E V  FR M   G+ P
Sbjct: 153 ----------------FDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSP 196

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
              +   V   ++SLG     +V++GLL KLG        VA++ I +Y+  GC + A +
Sbjct: 197 DAHAVSCVLKCIASLGSITEGEVIHGLLEKLG--LGEACAVANALIALYSRCGCMEDAMQ 254

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVTFLSALSAVSQL 343
           +FD+   R+   WN+ I GY  N     A++LF ++  E  EI    VT LS L A ++L
Sbjct: 255 VFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEI--SSVTVLSVLPACAEL 312

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS------------------------- 378
               +G+ +H Y +K+ +   +  + + I+  + S                         
Sbjct: 313 GFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSK 372

Query: 379 -----WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
                WN ++  + +    +E L+L  +M + G   D   ++ LL   + L     G   
Sbjct: 373 GNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVA 432

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H YL++ G   +  + + LI  YAKS +I  A  +F++     +D  +WN++I+G T NG
Sbjct: 433 HGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMP--HQDTISWNSVISGCTSNG 490

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           L  EA   F +M       +  T+ SVLPAC       +G+ +HG+S++  L     +  
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLAN 550

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMYS     +    +F  + +KN V++T MI  Y + G+ ++   L + M   GI+P
Sbjct: 551 ALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKP 610

Query: 613 DAITFVAVLSACSYAGLVDEGLQ 635
           D     +VL    +AG  DE L+
Sbjct: 611 DVFAVTSVLHG--FAG--DESLK 629



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 145/316 (45%), Gaps = 26/316 (8%)

Query: 425 RNQDVGKQTHAYLLRHG---IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           R+ +  ++ HA L+R G   I    +   L+  Y K G +  AR +F++      D   W
Sbjct: 108 RSLEAARRAHA-LVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVW 166

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            ++++ Y + G  +E    FRQM    V+P+   ++ VL     +G+I  G+ +HG   +
Sbjct: 167 TSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEK 226

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             L +   V  +LI +YS+ G +  A  VF  +  ++++++ + I GY  +G  +RA+ L
Sbjct: 227 LGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDL 286

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGL-----------VDEGLQIFDLMQQEYKIQPST 650
           F  M   G E  ++T ++VL AC+  G            +  GL ++DL   +  I  + 
Sbjct: 287 FSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGL-LWDLESVQSGIDEAL 345

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
                +  M  + G +  A      +  +GNV  +W  ++G     G+++ AE     LL
Sbjct: 346 GSK--LVFMYVKCGDMGSARRVFDAMPSKGNV-HVWNLIMG-----GYAKAAEFEESLLL 397

Query: 711 --EMDTRNSMPGYHVL 724
             +M      P  H L
Sbjct: 398 FEQMHELGITPDEHAL 413



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +AR LFD +T+   + W  +I G+  +    +A+ L+ QM+ S      D  ++S++L A
Sbjct: 765 VARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSG--VEPDTASFSAILYA 822

Query: 117 CAET 120
           C  +
Sbjct: 823 CCHS 826


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 256/769 (33%), Positives = 411/769 (53%), Gaps = 45/769 (5%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            GR   A ++FDS+     + WN++I G   N     A+ L+S+M   S  T   + T  S
Sbjct: 253  GRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMW--SQGTEISSVTVLS 310

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL ACA      IGKAVH + ++          + LL    +  S +D   +G K V + 
Sbjct: 311  VLPACAGLGYGLIGKAVHGYSVK----------SGLLWGLDSVQSGIDDAALGSKLVFMY 360

Query: 173  YSKYDLVC--KVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                D+    +VFD M  + NV  WN I+  Y K   + E++  F  M  +GI P   + 
Sbjct: 361  VKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI 420

Query: 230  VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
              +   ++ L   +   V +G +VKLG  +     V ++ I  YA+      A  +F+  
Sbjct: 421  SCLLKCITCLSCARDGLVAHGYIVKLG--FGAQCAVCNALISFYAKSNMIGDAVLVFNRM 478

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              ++T  WN++I G   N    EAIELF+++    +   D VT LS L A +Q +    G
Sbjct: 479  PRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQ-ELDSVTLLSVLPACAQSRYWFAG 537

Query: 350  QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
            + +H Y +K  +     + NA++                    +++VVSW  MI+++++ 
Sbjct: 538  RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597

Query: 390  GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGME 448
            GL D+   L+ EM   G   D   VT+ L A +   +   GK  H Y +R+G+     + 
Sbjct: 598  GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657

Query: 449  SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            + L++MY K   ++ AR IF++    ++D  +WN +I GY++N    E+F  F  ML   
Sbjct: 658  NALMEMYVKCRNVEEARLIFDRVT--NKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ- 714

Query: 509  VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
              PN VT+  +LPA   + ++E G+++H +++R    ++ +   +L+DMY K G +  A 
Sbjct: 715  FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVAR 774

Query: 569  NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
             +F ++ +KN +++T MI GYG HG  + A++LF  M+G GIEPDA +F A+L AC ++G
Sbjct: 775  VLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSG 834

Query: 629  LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            L  EG + F  MQ+EYKI+P  +HY C+ D+L R G + EA EF++ +  E +   IW S
Sbjct: 835  LAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDS-SIWVS 893

Query: 689  LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
            LL  CR+H + +LAE VA K+ +++  N+  GY+VLL+NIYAE   WE V K++ ++  R
Sbjct: 894  LLHGCRIHKNVKLAEKVADKVFKLEPENT--GYYVLLANIYAEAERWEAVKKLKNKIGGR 951

Query: 749  GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
            GLR+  G SWI+V   V+ F + ++ HP  ++I E L+ +A  MR  G+
Sbjct: 952  GLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGH 1000



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 252/566 (44%), Gaps = 61/566 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  +Y  V++ C E R+L   K  H                +L+   S   +     ++G
Sbjct: 96  DVRSYCMVVQLCGEERSLEAAKRAH----------------ALIRASSAAATGGKGSVLG 139

Query: 166 LKYVEVDYSKYDL--VCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            + V       DL     VFD M  +  +V  W +++S Y K   + EAV  FR M   G
Sbjct: 140 KRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCG 199

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           + P   +   V   +SSLG     +V++GLL KLG        VA++ I +Y+  G  + 
Sbjct: 200 VSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLG--LGQACAVANALIAVYSRCGRMED 257

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A ++FD+   R+   WN+MIGG   N     A++LF ++      +   VT LS L A +
Sbjct: 258 AARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEI-SSVTVLSVLPACA 316

Query: 342 QLQELDLGQQLHAYIIKNFV------------------------------ALPVIVLNAV 371
            L    +G+ +H Y +K+ +                              A    V +A+
Sbjct: 317 GLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAM 376

Query: 372 IER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
             + +V  WN ++  + + G  +E L L  +M + G   D   ++ LL   + L     G
Sbjct: 377 SSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDG 436

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
              H Y+++ G   +  + + LI  YAKS +I  A  +F  N    +D  +WN++I+G +
Sbjct: 437 LVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVF--NRMPRQDTISWNSVISGCS 494

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
            NGL  EA   F +M       + VT+ SVLPAC        G+ +HG+S++  L     
Sbjct: 495 SNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETS 554

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +  +L+DMYS          +F  + +KN V++T MI  Y + G+ ++   L + M   G
Sbjct: 555 LANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG 614

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQ 635
           I PD     + L A  +AG  DE L+
Sbjct: 615 IRPDVFAVTSALHA--FAG--DESLK 636



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 18/216 (8%)

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF----SIRYLLDQNVFVGTSLIDMY 558
           ++L  +   +V +   V+  C    ++E  K+ H      S      +   +G  L+  Y
Sbjct: 87  RLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAY 146

Query: 559 SKSGVINYAANVFAKIPEKNS--VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
            K G +  A  VF  +P + +    +T+++  Y + G  + A+SLFR M+ CG+ PDA  
Sbjct: 147 LKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHA 206

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML----GRVGKVVEAYEF 672
              VL   S  G + EG  I  L+++    Q      C VA+ L     R G++ +A   
Sbjct: 207 VSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQA-----CAVANALIAVYSRCGRMEDAARV 261

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHG-HSELAEVVAK 707
              +     +   W S++G C  +G H    ++ +K
Sbjct: 262 FDSMHPRDAI--SWNSMIGGCFSNGWHGTAVDLFSK 295


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/766 (31%), Positives = 416/766 (54%), Gaps = 48/766 (6%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           ++C + R     ++FD +   T   WNT+I  +V N  P  A+ LY  M+          
Sbjct: 88  ELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS- 146

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
            ++ ++LKACA+ R++R G  +H   ++   + + F+ N+L++MY+             K
Sbjct: 147 -SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------------K 192

Query: 168 YVEVDYSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
             ++  ++     ++FD  + + + V WN+I+S Y  + + +E +  FR M   G  P++
Sbjct: 193 NDDLSAAR-----RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 247

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            + V+   A       K    ++  ++K  S + ++L+V ++ I MY   G    A +I 
Sbjct: 248 YTIVSALTACDGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERIL 306

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                 +   WN++I GYVQN    EA+E F  ++       D+V+  S ++A  +L  L
Sbjct: 307 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNL 365

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
             G +LHAY+IK+     + V N +I+                    +D++SW T+I+ +
Sbjct: 366 LAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGY 425

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QN    E L L  ++ K+   ID + + ++L A+S L++  + K+ H ++LR G+    
Sbjct: 426 AQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV 485

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +++ L+D+Y K   +  A ++FE      +D  +W +MI+    NG   EA   FR+M+E
Sbjct: 486 IQNELVDVYGKCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVE 543

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             ++ + V +  +L A   +  +  G+++H + +R        +  +++DMY+  G +  
Sbjct: 544 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 603

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +I  K  + YT+MI  YG HG  + A+ LF  M+   + PD I+F+A+L ACS+
Sbjct: 604 AKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSH 663

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGL+DEG     +M+ EY+++P  EHY C+ DMLGR   VVEA+EFVK +  E    E+W
Sbjct: 664 AGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVW 722

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LL +CR H   E+ E+ A++LLE++ +N  PG  VL+SN++AE+G W +V+KVR +M+
Sbjct: 723 CALLAACRSHSEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMK 780

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
             G+ K  GCSWI++ G V++F ++D+ HP+S +IYE L  +  ++
Sbjct: 781 ASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 826


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/765 (31%), Positives = 416/765 (54%), Gaps = 49/765 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +   T   WNT+I  +V N  P  A+ LY  M+           ++ ++LKAC
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS--SFPALLKAC 192

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ R++R G  +H   ++   + + F+ N+L++MY+             K  ++  ++  
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------------KNDDLSAAR-- 237

Query: 178 LVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              ++FD  + + + V WN+I+S Y  + + +E +  FR M   G  P++ + V+   A 
Sbjct: 238 ---RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
                 K    ++  ++K  S + ++L+V ++ I MY   G    A +I       +   
Sbjct: 295 DGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN++I GYVQN    EA+E F  ++       D+V+  S ++A  +L  L  G +LHAY+
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYV 412

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           IK+     + V N +I+                    +D++SW T+I+ + QN    E L
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L  ++ K+   ID + + ++L A+S L++  + K+ H ++LR G+    +++ L+D+Y 
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   +  A ++FE      +D  +W +MI+    NG   EA   FR+M+E  ++ + V +
Sbjct: 533 KCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             +L A   +  +  G+++H + +R        +  +++DMY+  G +  A  VF +I  
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K  + YT+MI  YG HG  + A+ LF  M+   + PD I+F+A+L ACS+AGL+DEG   
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 710

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
             +M+ EY+++P  EHY C+ DMLGR   VVEA+EFVK +  E    E+W +LL +CR H
Sbjct: 711 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVWCALLAACRSH 769

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
              E+ E+ A++LLE++ +N  PG  VL+SN++AE+G W +V+KVR +M+  G+ K  GC
Sbjct: 770 SEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 827

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM-RNAGNKTI 800
           SWI++ G V++F ++D+ HP+S +IYE L  +  ++ R  G + +
Sbjct: 828 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKREL 872



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 26/385 (6%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A   +FMY + G  D A K+FD   +R    WNTMIG YV N  P  A+ L+   + +
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN-MRV 175

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
           + +     +F + L A ++L+++  G +LH+ ++K        ++NA++           
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     + D V WN+++S++  +G   E L L  EM   G   +S T+ + L+A  
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
                 +GK+ HA +L+   H   +   + LI MY + G +  A +I  + ++   D  T
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVT 353

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN++I GY QN + +EA   F  M+      + V++ S++ A   + N+  G +LH + I
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           ++  D N+ VG +LIDMYSK  +  Y    F ++ +K+ +++TT+I GY Q+     AL 
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473

Query: 601 LFRSMKGCGIEPDAITFVAVLSACS 625
           LFR +    +E D +   ++L A S
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASS 498



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 166/342 (48%), Gaps = 45/342 (13%)

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           +NN PVEA   F  VLEL               AVSQ      G+QLH+ I K F +  +
Sbjct: 75  ENNSPVEA---FAYVLEL----------CGKRRAVSQ------GRQLHSRIFKTFPSFEL 115

Query: 366 ---------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                 V + + +R   +WNTMI A+V NG     L L + M+ 
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKT 463
           +G  +   +  ALL A + LR+   G + H+ L++ G H  G + + L+ MYAK+  +  
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 464 ARQIFEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           AR++F+   + G  D   WN++++ Y+ +G   E    FR+M      PN  TI S L A
Sbjct: 236 ARRLFDGFQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           C+     +LGK++H   ++     + ++V  +LI MY++ G +  A  +  ++   + VT
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + ++I GY Q+ M + AL  F  M   G + D ++  ++++A
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/480 (22%), Positives = 218/480 (45%), Gaps = 55/480 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A ++   +     V WN++I G+V N +  EA+  +S M  +   +  D  + +S
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS--DEVSMTS 391

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A     NL  G  +H + I+   + +  V N+L++MYS C                 
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC----------------- 434

Query: 173 YSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
               +L C   + F  M  +++++W T+++ Y + + +VEA+  FR + +  +    +  
Sbjct: 435 ----NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++  A S L   KS  +V  +   +  + + D  + +  + +Y +     +A ++F++ 
Sbjct: 491 GSILRASSVL---KSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESI 547

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   W +MI     N +  EA+ELF +++E   +  D V  L  LSA + L  L+ G
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKG 606

Query: 350 QQLHAYII-KNF-----VALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           +++H Y++ K F     +A+ V+              V + +  + ++ + +MI+A+  +
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           G     + L  +M+ +    D ++  ALL A S+    D G+     ++ H    E   E
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR-GFLKIMEHEYELEPWPE 725

Query: 449 SY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            Y  L+DM  ++  +  A + F K    +     W A++A    +   E   +A +++LE
Sbjct: 726 HYVCLVDMLGRANCVVEAFE-FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/839 (30%), Positives = 436/839 (51%), Gaps = 71/839 (8%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLS----------PPIPKLKTPTIRSRLSKICQE----- 52
           L L    P ATP   +L   HSL           P   +L    ++S LS          
Sbjct: 31  LTLLSTHPLATPS--RLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLSAFLATKLVLM 88

Query: 53  ----GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
               G    A ++FD ++  T   WN ++  FV +    EAI LY  M+      + D  
Sbjct: 89  YGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLG--VAIDAC 146

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+ SVLKAC      R+G  +H   ++C      FV N+L+ MY  C      ++ G + 
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKC-----GDLGGARV 201

Query: 169 VEVDYSKYDLVCKVFD--TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           +             FD   M + + V+WN+I+S +V     +EA+  FR M  +G+  +T
Sbjct: 202 L-------------FDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNT 248

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +FV     +      K    ++G ++K  S +  D++VA++ I MYA+ G  + A ++F
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAVLK--SNHFADVYVANALIAMYAKCGRMEDAGRVF 306

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           ++ L R+   WNT++ G VQN    +A+  F  +    +   D V+ L+ ++A  +   L
Sbjct: 307 ESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKP-DQVSVLNLIAASGRSGNL 365

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G+++HAY I+N +   + + N ++                    E+D++SW T+I+ +
Sbjct: 366 LKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGY 425

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QN    E + L  ++Q +G  +D + + ++L A S L++++  ++ H Y+ +  +    
Sbjct: 426 AQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM 485

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +++ ++++Y + G I  AR+ FE   S  +D  +W +MI     NGL  EA   F  + +
Sbjct: 486 LQNAIVNVYGEVGHIDYARRAFESIRS--KDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            N+ P+ + I S L A   + +++ GK++HGF IR        + +SL+DMY+  G +  
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  +F  + +++ + +T+MI   G HG   +A++LF+ M    + PD ITF+A+L ACS+
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSH 663

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GL+ EG + F++M+  Y+++P  EHY C+ D+L R   + EAY FV+ +  + +  EIW
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSS-EIW 722

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+C +H + EL E+ AK+LL+ DT NS  G + L+SNI+A +G W +V++VR  M+
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTENS--GKYALISNIFAADGRWNDVEEVRLRMK 780

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
             GL+K  GCSWI+V   ++ F ++D+ HPQ+  IY  L +    +   G    Q   V
Sbjct: 781 GNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFV 839


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 265/804 (32%), Positives = 434/804 (53%), Gaps = 65/804 (8%)

Query: 38  KTPTIRSRLSKICQEGRPH-LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           + P++R+ L  +  + R    AR+L D  +    V W++++ G+V N    EA+L++++M
Sbjct: 14  RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
                   C+ +T+ SVLKAC+  R+L +G+ VH   +        FV N+L+ MY+ C 
Sbjct: 74  --CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKC- 130

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                   GL    +D S+     ++F  +  RNVV+WN + S YV++E   EAV  F+ 
Sbjct: 131 --------GL----LDDSR-----RLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M+R GI P+  S   +  A + L +      ++GL++K+G +   D F A++ + MY++ 
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDL--DQFSANALVDMYSKA 231

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV----- 331
           G  + A  +F +    +   WN +I G V   H    + L +    LDE+          
Sbjct: 232 GEIEGAVAVFQDIAHPDVVSWNAIIAGCVL--HDCNDLALML----LDEMKGSGTRPNMF 285

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVIVL--------------NAV 371
           T  SAL A + +   +LG+QLH+ +IK       F A+ ++ +              +++
Sbjct: 286 TLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSM 345

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ++D+++WN +IS + Q G   + + L  +M  +    +  T++ +L + ++L+   V K
Sbjct: 346 PKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCK 405

Query: 432 QTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           Q H   ++ GI+  F  + S L+D Y K   I  A +IFE+      D   + +MI  Y+
Sbjct: 406 QIHTISIKSGIYSDFYVINS-LLDTYGKCNHIDEASKIFEERTW--EDLVAYTSMITAYS 462

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           Q G  EEA   + QM + ++ P+    +S+L AC  +   E GKQLH  +I++    ++F
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIF 522

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
              SL++MY+K G I  A   F++IP +  V+++ MI GY QHG  + AL LF  M   G
Sbjct: 523 ASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDG 582

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           + P+ IT V+VL AC++AGLV+EG Q F+ M+  + I+P+ EHY C+ D+LGR GK+ EA
Sbjct: 583 VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEA 642

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            E V  +  E +   +WG+LLG+ R+H + EL +  AK L +++   S  G HVLL+NIY
Sbjct: 643 VELVNSIPFEADGF-VWGALLGAARIHKNIELGQKAAKMLFDLEPEKS--GTHVLLANIY 699

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A  G WENV KVRK M++  ++KE G SWI++   V  F   D+ H +S +IY  L++L 
Sbjct: 700 ASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLG 759

Query: 790 MEMRNAGNKTIQN---SNVDATPR 810
             +  AG  +I      NVD + +
Sbjct: 760 DLLSKAGYSSIVEIDIHNVDKSEK 783



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 169/627 (26%), Positives = 310/627 (49%), Gaps = 63/627 (10%)

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           +H H I+   +    + N L+ +YS C                   ++    K+ D    
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKC------------------RRFGYARKLVDESSE 44

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
            +VV+W++++S YV+     EA+  F  M  +G++ +  +F +V  A S   D      V
Sbjct: 45  LDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKV 104

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +G+ V  G E  +D FVA++ + MYA+ G  D +R++F   +ERN   WN +   YVQ+ 
Sbjct: 105 HGMAVVTGFE--SDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSE 162

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              EA+ LF +++    I+ ++ +    L+A + LQE DLG+++H  ++K  + L     
Sbjct: 163 LCGEAVGLFKEMVR-SGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSA 221

Query: 369 NAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           NA+++                     DVVSWN +I+  V +  +D  LML+ EM+  G  
Sbjct: 222 NALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTR 281

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSGLIKTARQI 467
            +  T+++ L A + +  +++G+Q H+ L++   H +   +  L+DMY+K  ++  AR+ 
Sbjct: 282 PNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRA 341

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           ++      +D   WNA+I+GY+Q G   +A   F +M   ++  N  T+++VL +   + 
Sbjct: 342 YDSMPK--KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQ 399

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            I++ KQ+H  SI+  +  + +V  SL+D Y K   I+ A+ +F +   ++ V YT+MI 
Sbjct: 400 AIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMIT 459

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI------FDLMQ 641
            Y Q+G  E AL L+  M+   I+PD     ++L+AC+     ++G Q+      F  M 
Sbjct: 460 AYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMC 519

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
             +           + +M  + G + +A     E+   G V   W +++G    HGH + 
Sbjct: 520 DIFASNS-------LVNMYAKCGSIEDADRAFSEIPNRGIV--SWSAMIGGYAQHGHGKE 570

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A  +  ++L    R+ +P  H+ L ++
Sbjct: 571 ALRLFNQML----RDGVPPNHITLVSV 593



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 51/92 (55%)

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           +LH   I++   ++  +   L+ +YSK     YA  +  +  E + V++++++ GY Q+G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             E AL +F  M   G++ +  TF +VL ACS
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACS 93


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/839 (30%), Positives = 438/839 (52%), Gaps = 71/839 (8%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLS----------PPIPKLKTPTIRSRLSKICQEGRPHL 57
           L L    P ATP   +L   HSL           P   +L    ++S LS        H+
Sbjct: 31  LTLLSTHPLATPS--RLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSAFLATKLLHM 88

Query: 58  ---------ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
                    A ++FD +T  T   WN ++  FV +    EAI LY +M+      + D  
Sbjct: 89  YEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLG--VAIDAC 146

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+ SVLKAC      R+G  +H   ++C      FV N+L+ MY  C      ++ G + 
Sbjct: 147 TFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKC-----GDLGGARV 201

Query: 169 VEVDYSKYDLVCKVFD--TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           +             FD   M + + V+WN+I+S +V   + +EA+  FR M  +G+  +T
Sbjct: 202 L-------------FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNT 248

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +FV     +      K    ++G  +K  S +  D++VA++ I MYA+ G  + A ++F
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAALK--SNHFADVYVANALIAMYAKCGRMEDAERVF 306

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            + L R+   WNT++ G VQN    +A+  F + ++      D V+ L+ ++A  +   L
Sbjct: 307 ASMLCRDYVSWNTLLSGLVQNELYRDALNYF-RDMQNSAQKPDQVSVLNLIAASGRSGNL 365

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G+++HAY I+N +   + + N +I                    E+D++SW T+I+ +
Sbjct: 366 LNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGY 425

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QN    E + L  ++Q +G  +D + + ++L A S L++++  ++ H Y+ +  +    
Sbjct: 426 AQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM 485

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +++ ++++Y + G    AR+ FE   S  +D  +W +MI     NGL  EA   F  + +
Sbjct: 486 LQNAIVNVYGEVGHRDYARRAFESIRS--KDIVSWTSMITCCVHNGLPVEALELFYSLKQ 543

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            N+ P+ + I S L A   + +++ GK++HGF IR        + +SL+DMY+  G +  
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVEN 603

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  +F  + +++ + +T+MI   G HG    A++LF+ M    + PD ITF+A+L ACS+
Sbjct: 604 SRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSH 663

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GL+ EG + F++M+  Y+++P  EHY C+ D+L R   + EAY+FV+ +  + +  E+W
Sbjct: 664 SGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSS-EVW 722

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+C +H + EL E+ AK+LL+ DT+NS  G + L+SNI+A +G W +V++VR  M+
Sbjct: 723 CALLGACHIHSNKELGELAAKELLQSDTKNS--GKYALISNIFAADGRWNDVEEVRLRMK 780

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
             GL+K  GCSWI+V   ++ F ++D+ HPQ+  IY  L +    +   G    Q   V
Sbjct: 781 GNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFV 839


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 249/764 (32%), Positives = 409/764 (53%), Gaps = 59/764 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ++QLFD   +      N ++  F  N+   EA+ L+  +++S   T  D  + S VLK C
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT--DGSSLSCVLKVC 102

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +  +GK VHC  I+C       V  SL++MY    S  D E               
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGE--------------- 147

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD MR +NVV+W ++++ Y +     +A++ F  M   GI+P+  +F  V   L+
Sbjct: 148 ---RVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLA 204

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           + G  +    V+ +++K G +  + +FV +S + MY++      A+ +FD+   RN   W
Sbjct: 205 ADGAVEKGVQVHTMVIKSGLD--STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSW 262

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+MI G+V N   +EA ELF + + L+ +      F + +   + ++E+   +QLH  +I
Sbjct: 263 NSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVI 321

Query: 358 KNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGL 396
           KN     + +  A++                      ++VVSW  +IS +VQNG  D  +
Sbjct: 322 KNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM 381

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LID 453
            L  +M+++G   +  T + +L+A + +       Q HA +++   ++E   S    L D
Sbjct: 382 NLFCQMRREGVRPNHFTYSTILTANAAVSPS----QIHALVVK--TNYENSPSVGTALSD 435

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            Y+K G    A +IFE  D  ++D   W+AM++GY Q G +E A   F Q+ +  V PN 
Sbjct: 436 SYSKIGDANEAAKIFELID--EKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNE 493

Query: 514 VTIASVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            T +SVL AC  P  ++E GKQ H  SI+      + V ++L+ MY+K G I  A  VF 
Sbjct: 494 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 553

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +  +++ V++ +MI GY QHG  +++L +F  M+   +E D ITF+ V+SAC++AGLV+E
Sbjct: 554 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 613

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G + FDLM ++Y I P+ EHY C+ D+  R G + +A + + ++        IW +LL +
Sbjct: 614 GQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGA-TIWRTLLAA 672

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+H + +L E+ A+KL+ +  ++S    +VLLSNIYA  GNW+   KVRK M  + ++K
Sbjct: 673 CRVHLNVQLGELAAEKLISLQPQDSAA--YVLLSNIYATAGNWQERAKVRKLMDMKKVKK 730

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           E G SWI+V      F + D  HPQS +IY  LE L++ +++AG
Sbjct: 731 EAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAG 774


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/638 (37%), Positives = 371/638 (58%), Gaps = 36/638 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGD 241
           FD + +++V  WN+++S YV    + EA+  F +++L   IRP   +F  V  A  +L D
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 233

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    ++    KLG ++  ++FVA+S I MY+  G    AR +FD+   R+   WN MI
Sbjct: 234 GRR---IHCWAFKLGFQW--NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 288

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            G +QN +  +A+++  + + L+ I  + VT +S L    QL ++     +H Y+IK+ +
Sbjct: 289 SGLIQNGNAAQALDVLDE-MRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGL 347

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + V NA+I                      DVVSWN++I+A+ QN           +
Sbjct: 348 EFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK 407

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSG 459
           MQ  GF  D +T+ +L S  +  R+    +  H +++R G   E   + + ++DMYAK G
Sbjct: 408 MQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLG 467

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIAS 518
           L+ +A ++FE      +D  +WN +I GY QNGL  EA   ++ M E   + PN  T  S
Sbjct: 468 LLDSAHKVFEIILV--KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 525

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +LPA   +G ++ G ++HG  I+  L  +VFV T LID+Y K G +  A ++F ++P+++
Sbjct: 526 ILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 585

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           SVT+  +I  +G HG +E+ L LF  M   G++PD +TFV++LSACS++G V+EG   F 
Sbjct: 586 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 645

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM QEY I+PS +HY C+ D+LGR G +  AY F+K++  + +   IWG+LLG+CR+HG+
Sbjct: 646 LM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDA-SIWGALLGACRIHGN 703

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            EL +  + +L E+D++N   GY+VLLSNIYA  G WE VDKVR   RERGL+K  G S 
Sbjct: 704 IELGKFASDRLFEVDSKNV--GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWST 761

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           I+V   V+ F + +Q HP+  +IYE L  L  +M++ G
Sbjct: 762 IEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 277/542 (51%), Gaps = 45/542 (8%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           A  ++ LLV  G   V  +F+++  + +YA LG    +R  FD   +++   WN+MI  Y
Sbjct: 135 AKCLHALLVVAGK--VQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAY 192

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           V N H  EAI  F Q+L + EI  D  TF   L A   L +   G+++H +  K      
Sbjct: 193 VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWN 249

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V  ++I                     RD+ SWN MIS  +QNG   + L ++ EM+ 
Sbjct: 250 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 309

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           +G  ++ VTV ++L     L +       H Y+++HG+ F+  + + LI+MYAK G ++ 
Sbjct: 310 EGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLED 369

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR+ F++      D  +WN++IA Y QN     A   F +M  +   P+++T+ S+    
Sbjct: 370 ARKAFQQ--MFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIV 427

Query: 524 NPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
               + +  + +HGF +R   L ++V +G +++DMY+K G+++ A  VF  I  K+ +++
Sbjct: 428 AQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISW 487

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
            T+I GY Q+G++  A+ +++ M+ C  I P+  T+V++L A ++ G + +G++I   + 
Sbjct: 488 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVI 547

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           +   +        C+ D+ G+ G++V+A     ++ +E +V   W +++    +HGH+E 
Sbjct: 548 KT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV--TWNAIISCHGIHGHAEK 604

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNI----YAEEGNWENVDKVRKEMRERGLR---KEV 754
              +  ++L+   +     +  LLS      + EEG W       + M+E G++   K  
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLMQEYGIKPSLKHY 659

Query: 755 GC 756
           GC
Sbjct: 660 GC 661



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 175/679 (25%), Positives = 315/679 (46%), Gaps = 92/679 (13%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           +H+L     K+++  I +RL  +    G   L+R  FD I +     WN++I  +V N  
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
            +EAI  + Q+   S     D YT+  VLKAC     L  G+ +HC   +     + FV 
Sbjct: 198 FHEAIGCFYQLLLVSEIRP-DFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVA 253

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            SL++MYS                   +    +   +FD M  R++ +WN ++S  ++  
Sbjct: 254 ASLIHMYSR------------------FGFTGIARSLFDDMPFRDMGSWNAMISGLIQNG 295

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
              +A+     M   GI+ + ++ V++ P    LGD  +A +++  ++K G E+  DLFV
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF--DLFV 353

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           +++ I MYA+ G  + ARK F      +   WN++I  Y QN+ PV A   FV+ ++L+ 
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVK-MQLNG 412

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVIE----------- 373
              D +T +S  S V+Q ++    + +H +I+ + ++   V++ NAV++           
Sbjct: 413 FQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSA 472

Query: 374 ---------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAAS 422
                    +DV+SWNT+I+ + QNGL  E +  VY+M ++   I  +  T  ++L A +
Sbjct: 473 HKVFEIILVKDVISWNTLITGYAQNGLASEAIE-VYKMMEECKEIIPNQGTWVSILPAYA 531

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           ++     G + H  +++  +H +  + + LID+Y K G +  A  +F +         TW
Sbjct: 532 HVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ--VPQESSVTW 589

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NA+I+ +  +G  E+    F +ML+  V P+ VT  S+L AC+  G +E GK        
Sbjct: 590 NAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE 649

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
           Y +  ++     ++D+  ++G +  A      +P                          
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP-------------------------- 683

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADML 660
                   ++PDA  + A+L AC   G ++ G    D L + + K   +  +Y  ++++ 
Sbjct: 684 --------LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSK---NVGYYVLLSNIY 732

Query: 661 GRVGKVVEAYEFVKELGEE 679
             VGK  E  + V+ L  E
Sbjct: 733 ANVGK-WEGVDKVRSLARE 750


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/756 (31%), Positives = 412/756 (54%), Gaps = 48/756 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +   T   WNT+I  +V N  P  A+ LY  M+           ++ ++LKAC
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS--SFPALLKAC 192

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ R++R G  +H   ++   + + F+ N+L++MY+             K  ++  ++  
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------------KNDDLSAAR-- 237

Query: 178 LVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              ++FD  + + + V WN+I+S Y  + + +E +  FR M   G  P++ + V+   A 
Sbjct: 238 ---RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
                 K    ++  ++K  S + ++L+V ++ I MY   G    A +I       +   
Sbjct: 295 DGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN++I GYVQN    EA+E F  ++       D+V+  S ++A  +L  L  G +LHAY+
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYV 412

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           IK+     + V N +I+                    +D++SW T+I+ + QN    E L
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L  ++ K+   ID + + ++L A+S L++  + K+ H ++LR G+    +++ L+D+Y 
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   +  A ++FE      +D  +W +MI+    NG   EA   FR+M+E  ++ + V +
Sbjct: 533 KCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             +L A   +  +  G+++H + +R        +  +++DMY+  G +  A  VF +I  
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K  + YT+MI  YG HG  + A+ LF  M+   + PD I+F+A+L ACS+AGL+DEG   
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 710

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
             +M+ EY+++P  EHY C+ DMLGR   VVEA+EFVK +  E    E+W +LL +CR H
Sbjct: 711 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVWCALLAACRSH 769

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
              E+ E+ A++LLE++ +N  PG  VL+SN++AE+G W +V+KVR +M+  G+ K  GC
Sbjct: 770 SEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 827

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           SWI++ G V++F ++D+ HP+S +IYE L  +  ++
Sbjct: 828 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 26/385 (6%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A   +FMY + G  D A K+FD   +R    WNTMIG YV N  P  A+ L+   + +
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN-MRV 175

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
           + +     +F + L A ++L+++  G +LH+ ++K        ++NA++           
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     + D V WN+++S++  +G   E L L  EM   G   +S T+ + L+A  
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
                 +GK+ HA +L+   H   +   + LI MY + G +  A +I  + ++   D  T
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVT 353

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN++I GY QN + +EA   F  M+      + V++ S++ A   + N+  G +LH + I
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           ++  D N+ VG +LIDMYSK  +  Y    F ++ +K+ +++TT+I GY Q+     AL 
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473

Query: 601 LFRSMKGCGIEPDAITFVAVLSACS 625
           LFR +    +E D +   ++L A S
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASS 498



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 166/342 (48%), Gaps = 45/342 (13%)

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           +NN PVEA   F  VLEL               AVSQ      G+QLH+ I K F +  +
Sbjct: 75  ENNSPVEA---FAYVLEL----------CGKRRAVSQ------GRQLHSRIFKTFPSFEL 115

Query: 366 ---------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                 V + + +R   +WNTMI A+V NG     L L + M+ 
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKT 463
           +G  +   +  ALL A + LR+   G + H+ L++ G H  G + + L+ MYAK+  +  
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 464 ARQIFEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           AR++F+   + G  D   WN++++ Y+ +G   E    FR+M      PN  TI S L A
Sbjct: 236 ARRLFDGFQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           C+     +LGK++H   ++     + ++V  +LI MY++ G +  A  +  ++   + VT
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + ++I GY Q+ M + AL  F  M   G + D ++  ++++A
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 217/480 (45%), Gaps = 55/480 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A ++   +     V WN++I G+V N +  EA+  +S M  +   +  D  + +S
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS--DEVSMTS 391

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A     NL  G  +H + I+   + +  V N+L++MYS C                 
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC----------------- 434

Query: 173 YSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
               +L C   + F  M  +++++W T+++ Y + + +VEA+  FR + +  +    +  
Sbjct: 435 ----NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++  A S L   KS  +V  +   +  + + D  + +  + +Y +     +A ++F++ 
Sbjct: 491 GSILRASSVL---KSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESI 547

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   W +MI     N +  EA+ELF +++E   +  D V  L  LSA + L  L+ G
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKG 606

Query: 350 QQLHAYII-KNF-----VALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           +++H Y++ K F     +A+ V+              V + +  + ++ + +MI+A+  +
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G     + L  +M+ +    D ++  ALL A S+    D G+     ++ H    E    
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR-GFLKIMEHEYELEPWPE 725

Query: 450 Y---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +   L+DM  ++  +  A + F K    +     W A++A    +   E   +A +++LE
Sbjct: 726 HYVCLVDMLGRANCVVEAFE-FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/765 (31%), Positives = 415/765 (54%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR+ F  +     V WN++I GF+ N    ++I ++ +M +       D  + + 
Sbjct: 129 GEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCG--VGFDRASLAV 186

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC       +G  VH   ++   +      ++LL MY+ C                 
Sbjct: 187 VLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC----------------- 229

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + D    VF  +  +N V+W+ +++  V+ +R VE +  F+ M  +G+  S   + ++
Sbjct: 230 -KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F + ++L   +    ++   +K  S + +D+ V ++ + MYA+ G    A+K+  +  + 
Sbjct: 289 FRSCAALSALRLGKELHSHALK--SAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKC 346

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           + + +N +I GY +++   +A++ F Q+L    + FD++T   AL+A + ++    G+Q+
Sbjct: 347 SLQSYNAIIVGYARSDRGFQALKSF-QLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H   +K+     + V NA+++                    RD VSWN +I+A  QNG +
Sbjct: 406 HGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNE 465

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           +E L     M       D  T  ++L A +  +  + G + H  +++ G+ F+  + + L
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G+I+ A +I ++ +   +   +WNA+I+G++     E+A   F +MLE  V P
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQ--KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T A+VL  C  +  + LGKQ+H   I+  L  +V++ ++L+DMYSK G +  +  +F
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMF 643

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            K P ++ VT+  M+ GY  HG+ E AL LF SM+   ++P+  TFV+VL AC++ GLVD
Sbjct: 644 EKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVD 703

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +GL  FD+M  EY + P +EHY C+ D+LGR G++ EA   V+++  E + + IW +LL 
Sbjct: 704 KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAV-IWRNLLS 762

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            C++HG+ E+AE   + LL++D ++S     VLLSNIYA+ G W NV ++RK MR   L+
Sbjct: 763 VCKIHGNVEVAEKATRALLQLDPQDSSAC--VLLSNIYADAGMWGNVSEMRKMMRHNKLK 820

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCSWI++   V+ F   D+ HP+  +IYE L  L  EM++ G
Sbjct: 821 KEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVG 865



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 175/659 (26%), Positives = 297/659 (45%), Gaps = 51/659 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+S + + C++  +L  GK  H   I C   P+ FV N L+ MY  CL    A  V  K 
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 169 VEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
              D   Y             D+  K F  M  R+VV+WN+++S +++     +++  F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M R G+     S   V  A  +L +      V+GL+VK G  +  D+   S+ + MYA+
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFG--FDCDVVTGSALLGMYAK 228

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               D +  +F    E+N   W+ MI G VQN+  VE +ELF ++  +   V   + + S
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSI-YAS 287

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------D 375
              + + L  L LG++LH++ +K+     +IV  A ++                      
Sbjct: 288 LFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCS 347

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           + S+N +I  + ++    + L     + K G   D +T++  L+A +++R    G+Q H 
Sbjct: 348 LQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG 407

Query: 436 YLLRH-GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
             ++   +    + + ++DMY K   +  A  +F+  +   RD  +WNA+IA   QNG  
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER--RDAVSWNAIIAACEQNGNE 465

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EE    F  M+   + P+  T  SVL AC     +  G ++H   I+  +  + FVG +L
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +DMY K G+I  A  +  +  +K  V++  +I G+     SE A   F  M   G+ PD 
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDN 585

Query: 615 ITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYE 671
            T+ AVL  C+    V  G QI   +++QE +    ++ Y C  + DM  + G + ++  
Sbjct: 586 FTYAAVLDTCANLATVGLGKQIHAQIIKQELQ----SDVYICSTLVDMYSKCGNMQDSQL 641

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             ++      V   W ++L     + H  L E   K    M   N  P +   +S + A
Sbjct: 642 MFEKAPNRDFV--TWNAMLCG---YAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRA 695



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 33/173 (19%)

Query: 501 FRQMLEHNVTP--NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
           F  + ++   P   + T + +   C+   ++  GKQ H   I    +   FV   L+ MY
Sbjct: 35  FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYG---------------------------- 590
            K   ++YA  VF K+  ++ V+Y ++I GY                             
Sbjct: 95  IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154

Query: 591 ---QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
              Q+G   +++ +F  M  CG+  D  +   VL AC      D G+Q+  L+
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLV 207


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 249/720 (34%), Positives = 394/720 (54%), Gaps = 58/720 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLD 160
           D+ +Y +VL+ C+E R+L  GK    HF+   S+  R   +++L      MY  C    +
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGK--RAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLEN 147

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           A                   +VFD M +  +V  W  ++S Y K     E V  FR M  
Sbjct: 148 AR------------------RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHC 189

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G+RP   +   V   ++ LG  +  +VV+GLL KLG  + +   V ++ +  YA+    
Sbjct: 190 CGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLG--FGSQCAVGNALMAFYAKSNRT 247

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALS 338
             A  +FD    R+   WN+MI G   N    +AIELFV++ LE +E+  D  T LS L 
Sbjct: 248 KDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEEL--DSATLLSVLP 305

Query: 339 AVSQLQELDLGQQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVS 378
           A ++L  L LG+ +H Y +K  F++   +                   +   +++++VVS
Sbjct: 306 ACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVS 365

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W  MI+++ + GL D+   L  EM  +G   D   +T+ L A +       GK  H Y +
Sbjct: 366 WTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAI 425

Query: 439 RHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           R+G+     + + L++MY K G ++ A+ IF+   S  +D  +WN +I GY++N L  EA
Sbjct: 426 RNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVS--KDMISWNTLIGGYSRNNLANEA 483

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           F  F +ML   + PN VT+  +LPA   + ++E G+++H +++R    ++ FV  +LIDM
Sbjct: 484 FSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDM 542

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y K G +  A  +F ++  KN +++T M+ GYG HG    A++LF  M+  GI PDA +F
Sbjct: 543 YVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASF 602

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            A+L ACS++GL DEG + FD M++E+KI+P  +HY C+ D+L   G + EAYEF+  + 
Sbjct: 603 SAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMP 662

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E +   IW SLL  CR+H + +LAE VA+++ E++  N+  GY+VLL+NIYAE   WE 
Sbjct: 663 IEPDS-SIWVSLLRGCRIHRNVKLAEEVAERVFELEPENT--GYYVLLANIYAEAERWEA 719

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           V K++ ++  RGLR+  GCSWI+  G V+ F + ++ HPQ  +I E L  +A  M+  G+
Sbjct: 720 VRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGH 779



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 206/449 (45%), Gaps = 47/449 (10%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +FD +     + WN++I G   N L  +AI L+ +M         D+ T  SVL ACAE 
Sbjct: 253 VFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGE--ELDSATLLSVLPACAEL 310

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
             L +G+ VH + ++        + N LL+MYS C                  S +    
Sbjct: 311 HLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNC------------------SDWRSTN 352

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+F  M ++NVV+W  +++ Y +   Y +    F+ M   G RP   +  +   A +   
Sbjct: 353 KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNE 412

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             K    V+G  ++ G E V  L V ++ + MY + G  + A+ IFD  + ++   WNT+
Sbjct: 413 LLKHGKSVHGYAIRNGMEKV--LAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTL 470

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IGGY +NN   EA  LF ++L   ++  + VT    L A + L  L+ G+++HAY ++  
Sbjct: 471 IGGYSRNNLANEAFSLFTEMLL--QLRPNAVTMTCILPAAASLSSLERGREMHAYALRRG 528

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
                 V NA+I+                    ++++SW  M++ +  +G   + + L  
Sbjct: 529 YLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFE 588

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKS 458
           +M+  G   D+ + +A+L A S+   +D G +    + +       ++ Y  ++D+   +
Sbjct: 589 QMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINT 648

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           G +K A +  +     + D + W +++ G
Sbjct: 649 GNLKEAYEFIDSMPI-EPDSSIWVSLLRG 676



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 5/221 (2%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY----LIDMYAKSGLIKTA 464
           +D  +  A+L   S +R+ + GK+ H  +    +  +GM++     L+ MY K G ++ A
Sbjct: 89  VDDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENA 148

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R++F++      D   W A+++GY + G L E  + FR+M    V P+  TI+ VL    
Sbjct: 149 RRVFDEMPQVS-DVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIA 207

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G+IE G+ +HG   +        VG +L+  Y+KS     A  VF  +P ++ +++ +
Sbjct: 208 GLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNS 267

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           MI G   +G+ ++A+ LF  M   G E D+ T ++VL AC+
Sbjct: 268 MISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACA 308



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 24/293 (8%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F ++ +   V W  +I  +    L  +   L+ +M      T  D +  +S L A A 
Sbjct: 353 KIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEG--TRPDIFAITSALHAFAG 410

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L+ GK+VH + IR        V N+L+ MY  C +  +A++                
Sbjct: 411 NELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL---------------- 454

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +FD +  +++++WNT++  Y +     EA   F  ML + +RP+ ++   + PA +SL
Sbjct: 455 --IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASL 511

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              +    ++   ++ G  Y+ D FVA++ I MY + G    AR++FD    +N   W  
Sbjct: 512 SSLERGREMHAYALRRG--YLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTI 569

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           M+ GY  +    +AI LF Q + +  I  D  +F + L A S     D G + 
Sbjct: 570 MVAGYGMHGRGRDAIALFEQ-MRVSGIAPDAASFSAILYACSHSGLRDEGWRF 621



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 23/184 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYSSVLKA 116
           A+ +FD +     + WNT+I G+  NNL  EA  L+++M  +  P    +  T + +L A
Sbjct: 452 AKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRP----NAVTMTCILPA 507

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A   +L  G+ +H + +R       FV N+L++MY  C + L                 
Sbjct: 508 AASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALL----------------- 550

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            L  ++FD +  +N+++W  +V+ Y    R  +A+  F  M   GI P   SF  +  A 
Sbjct: 551 -LARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYAC 609

Query: 237 SSLG 240
           S  G
Sbjct: 610 SHSG 613


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 248/761 (32%), Positives = 405/761 (53%), Gaps = 53/761 (6%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G   LA+ +F+ +    +V W  +I G   N    EAILL+ QM KS+   +   Y +
Sbjct: 159 KNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPT--PYVF 216

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC +    ++G+ +H   ++   +   FV N+L+ +YS   + + AE        
Sbjct: 217 SSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAE-------- 268

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     ++F  M RR+ +++N+++S   +      A++ F  M    ++P  ++  
Sbjct: 269 ----------QIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF--ARKIFDN 288
           ++  A +S+G       ++  ++K+G    +DL +  S + +Y +  CFD   A + F  
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKMGMS--SDLIIEGSLLDLYVK--CFDIETAHEYFLT 374

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
               N  +WN M+  Y Q  +  E+  +F+Q ++++ ++ +  T+ S L   + L  LDL
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQ-MQIEGLMPNQYTYPSILRTCTSLGALDL 433

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+Q+H  +IK+     V V + +I                    E DVVSW  MI+ + Q
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           + L  E L L  EM+ QG   D++  ++ +SA + ++  + G+Q HA     G   +  +
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ +YA+ G  + A   FEK D+  +D  +WNA+I+G+ Q+G  EEA   F QM + 
Sbjct: 554 GNALVSLYARCGRAQDAYLAFEKIDA--KDNISWNALISGFAQSGHCEEALQVFSQMNQA 611

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V  N+ T  S + A     NI+ GKQ+H   I+   D        LI +YSK G I  A
Sbjct: 612 GVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDA 671

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
              F ++PEKN V++  MI GY QHG    A+SLF  MK  G+ P+ +TFV VLSACS+ 
Sbjct: 672 KREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+EGL  F  M +E+ + P  EHY CV D+LGR   +  A EF++E+  E + + IW 
Sbjct: 732 GLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAM-IWR 790

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL +C +H + E+ E  A+ LLE++  +S    +VLLSN+YA  G W+  D+ R+ M++
Sbjct: 791 TLLSACTVHKNIEIGEFAARHLLELEPEDSAT--YVLLSNMYAVSGKWDYRDRTRQMMKD 848

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           RG++KE G SWI+V   ++ F   D+ HP + +IYE ++ L
Sbjct: 849 RGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDL 889



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 189/701 (26%), Positives = 336/701 (47%), Gaps = 54/701 (7%)

Query: 44  SRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPY 102
           SRL  I    G    A +LFD I       WN +I G +   L  + + L+S M   +  
Sbjct: 49  SRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITEN-- 106

Query: 103 TSCDNYTYSSVLKACAETRN-LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
            + D  T++SVL+AC+  +   ++ + +H   I      S  V N L+++YS        
Sbjct: 107 VTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS-------- 158

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                K   VD +K      VF+ +  ++ V+W  ++S   +  R  EA+  F  M +  
Sbjct: 159 -----KNGHVDLAKL-----VFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSA 208

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           + P+   F +V  A + +  +K  + ++G +VK G    ++ FV ++ + +Y+  G    
Sbjct: 209 VIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG--LSSETFVCNALVTLYSRWGNLIA 266

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A +IF     R+   +N++I G  Q      A++LF + ++LD +  D VT  S LSA +
Sbjct: 267 AEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLF-EKMQLDCMKPDCVTVASLLSACA 325

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            +     G+QLH+Y+IK  ++  +I+  ++++                     +VV WN 
Sbjct: 326 SVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNV 385

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+ A+ Q G   E   +  +MQ +G M +  T  ++L   ++L   D+G+Q H  +++ G
Sbjct: 386 MLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSG 445

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
             F   + S LIDMYAK G + TAR I ++    + D  +W AMIAGYTQ+ L  EA   
Sbjct: 446 FQFNVYVCSVLIDMYAKHGELDTARGILQRLR--EEDVVSWTAMIAGYTQHDLFAEALKL 503

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F++M    +  + +  +S + AC  +  +  G+Q+H  S      +++ +G +L+ +Y++
Sbjct: 504 FQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYAR 563

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G    A   F KI  K+++++  +I G+ Q G  E AL +F  M   G+E +  TF + 
Sbjct: 564 CGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSA 623

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           +SA +    + +G QI  +M +       TE    +  +  + G + +A     E+ E+ 
Sbjct: 624 VSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK- 681

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           NV+  W +++     HG+   A  + +   EM     MP +
Sbjct: 682 NVVS-WNAMITGYSQHGYGSEAVSLFE---EMKQLGLMPNH 718



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/619 (27%), Positives = 299/619 (48%), Gaps = 54/619 (8%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TY  + + C  + +L   K +H    +   +    + + L+++Y             L +
Sbjct: 12  TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIY-------------LAH 58

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            EVD +      K+FD +   NV  WN ++S  +  +   + +  F +M+   + P   +
Sbjct: 59  GEVDNA-----IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDEST 113

Query: 229 FVNVFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           F +V  A S     ++  + ++  ++  G  + +   V +  I +Y++ G  D A+ +F+
Sbjct: 114 FASVLRACSGGKAPFQVTEQIHAKIIHHG--FGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               +++  W  MI G  QN    EAI LF Q +    ++     F S LSA ++++   
Sbjct: 172 RLFLKDSVSWVAMISGLSQNGREDEAILLFCQ-MHKSAVIPTPYVFSSVLSACTKIELFK 230

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           LG+QLH +I+K  ++    V NA++                     RD +S+N++IS   
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           Q G  D  L L  +MQ      D VTV +LLSA +++     GKQ H+Y+++ G+  +  
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI 350

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +E  L+D+Y K   I+TA + F   ++   +   WN M+  Y Q G L E++  F QM  
Sbjct: 351 IEGSLLDLYVKCFDIETAHEYFLTTET--ENVVLWNVMLVAYGQLGNLSESYWIFLQMQI 408

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN  T  S+L  C  +G ++LG+Q+H   I+     NV+V + LIDMY+K G ++ 
Sbjct: 409 EGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +  ++ E++ V++T MI GY QH +   AL LF+ M+  GI  D I F + +SAC+ 
Sbjct: 469 ARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG 528

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYC---CVADMLGRVGKVVEAYEFVKELGEEGNVL 683
              +++G QI     Q Y I   +E       +  +  R G+  +AY   +++  + N+ 
Sbjct: 529 IQALNQGQQIH---AQSY-ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNI- 583

Query: 684 EIWGSLLGSCRLHGHSELA 702
             W +L+      GH E A
Sbjct: 584 -SWNALISGFAQSGHCEEA 601



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 231/487 (47%), Gaps = 32/487 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   GIR +  +++ +F    + G    A  ++  + K G  +  +  + S  I +Y   
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSG--FDGEDVLGSRLIDIYLAH 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  D A K+FD+    N   WN +I G +      + + LF  ++  + +  D+ TF S 
Sbjct: 59  GEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLF-SLMITENVTPDESTFASV 117

Query: 337 LSAVSQLQE-LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RD 375
           L A S  +    + +Q+HA II +      +V N +I+                    +D
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSW  MIS   QNG +DE ++L  +M K   +      +++LSA + +    +G+Q H 
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237

Query: 436 YLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           ++++ G+  E    + L+ +Y++ G +  A QIF K     RD+ ++N++I+G  Q G  
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHR--RDRISYNSLISGLAQRGFS 295

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           + A   F +M    + P+ VT+AS+L AC  +G    GKQLH + I+  +  ++ +  SL
Sbjct: 296 DRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSL 355

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +D+Y K   I  A   F     +N V +  M++ YGQ G    +  +F  M+  G+ P+ 
Sbjct: 356 LDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQ 415

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEF 672
            T+ ++L  C+  G +D G QI     Q  K       Y C  + DM  + G++  A   
Sbjct: 416 YTYPSILRTCTSLGALDLGEQIH---TQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472

Query: 673 VKELGEE 679
           ++ L EE
Sbjct: 473 LQRLREE 479



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 11/312 (3%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGL 460
           M+++G   +  T   L     N  +    K+ HA + + G   E  + S LID+Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  A ++F+  D    + + WN +I+G     L  +    F  M+  NVTP+  T ASVL
Sbjct: 61  VDNAIKLFD--DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118

Query: 521 PACNP-MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
            AC+      ++ +Q+H   I +    +  V   LID+YSK+G ++ A  VF ++  K+S
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI G  Q+G  + A+ LF  M    + P    F +VLSAC+   L   G Q+   
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238

Query: 640 MQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           +    K   S+E + C A   +  R G ++ A +   ++     +   + SL+      G
Sbjct: 239 I---VKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRI--SYNSLISGLAQRG 293

Query: 698 HSELAEVVAKKL 709
            S+ A  + +K+
Sbjct: 294 FSDRALQLFEKM 305


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 237/765 (30%), Positives = 414/765 (54%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+ LFD++     V WN+++  ++ N +  ++I ++ +M+  S     D  T+S 
Sbjct: 86  GNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR--SLKIPHDYATFSV 143

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC+   +  +G  VHC  I+          ++L++MYS C                 
Sbjct: 144 VLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC----------------- 186

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             K D   ++F  M  RN+V W+ +++ YV+ +R++E ++ F+ ML++G+  S  ++ +V
Sbjct: 187 -KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F + + L  +K    ++G  +K  S++  D  + ++ + MYA+      A K+F+     
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALK--SDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
             + +N +I GY + +  ++A+E+F Q L+   + FD+++   AL+A S ++    G QL
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIF-QSLQRTYLSFDEISLSGALTACSVIKGHLEGIQL 362

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H   +K  +   + V N +++                    RD VSWN +I+A  QN   
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            + L L   M +     D  T  +++ A +  +  + G + H  +++ G+  +  + S L
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G++  A +I ++ +  ++   +WN++I+G++     E A   F QMLE  V P
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLE--EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T A+VL  C  M  IELGKQ+H   ++  L  +V++ ++L+DMYSK G +  +  +F
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            K P+++ VT++ MI  Y  HG  E+A+ LF  M+   ++P+   F++VL AC++ G VD
Sbjct: 601 EKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +GL  F +MQ  Y + P  EHY C+ D+LGR  +V EA + ++ +  E + + IW +LL 
Sbjct: 661 KGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDV-IWRTLLS 719

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C++ G+ E+AE     LL++D ++S    +VLL+N+YA  G W  V K+R  M+   L+
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQLDPQDSSA--YVLLANVYANVGMWGEVAKIRSIMKNCKLK 777

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCSWI+V   V+ F   D+ HP+S +IYE    L  EM+ AG
Sbjct: 778 KEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 304/677 (44%), Gaps = 85/677 (12%)

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +T+S +L+ C+  + L  GK  H   I     P+ +V N L+  Y  C SS         
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFY--CKSS--------- 55

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNT-------------------------IVSW-- 200
              ++Y+      KVFD M  R+V++WNT                         +VSW  
Sbjct: 56  --NMNYA-----FKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNS 108

Query: 201 ----YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
               Y+      +++  F  M  + I     +F  V  A S + DY     V+ L +++G
Sbjct: 109 LLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMG 168

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
            E  ND+   S+ + MY++    D A +IF    ERN   W+ +I GYVQN+  +E ++L
Sbjct: 169 FE--NDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKL 226

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---- 372
           F  +L++   V    T+ S   + + L    LG QLH + +K+  A   I+  A +    
Sbjct: 227 FKDMLKVGMGV-SQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYA 285

Query: 373 --ERDVVSW--------------NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
             +R   +W              N +I  + +     + L +   +Q+     D ++++ 
Sbjct: 286 KCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSG 345

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            L+A S ++    G Q H   ++ G+ F   + + ++DMY K G +  A  IF+  D   
Sbjct: 346 ALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFD--DMER 403

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           RD  +WNA+IA + QN  + +    F  ML   + P+  T  SV+ AC     +  G ++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           HG  ++  +  + FVG++L+DMY K G++  A  +  ++ EK +V++ ++I G+     S
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQS 523

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           E A   F  M   G+ PD  T+  VL  C+    ++ G QI     Q  K+   ++ Y  
Sbjct: 524 ENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIH---AQILKLNLHSDVYIA 580

Query: 656 --VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
             + DM  + G + ++    ++  +   V   W +++ +   HGH E A    K   EM 
Sbjct: 581 STLVDMYSKCGNMQDSRLMFEKTPKRDYV--TWSAMICAYAYHGHGEQA---IKLFEEMQ 635

Query: 714 TRNSMPGYHVLLSNIYA 730
             N  P + + +S + A
Sbjct: 636 LLNVKPNHTIFISVLRA 652


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 245/776 (31%), Positives = 427/776 (55%), Gaps = 56/776 (7%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S     G  +LA + F    +   V WN+++ GF+ N    ++I ++  M +S      
Sbjct: 116 ISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEE-VGF 174

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  T++ VLKAC+   +  +G  VH   +R          ++LL+MY+ C          
Sbjct: 175 DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC---------- 224

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + D   K+F  +  +N V W+ I++  V+ + ++  +  F+ M ++GI  S
Sbjct: 225 --------KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVS 276

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
              + +VF + + L   K    ++   +K   ++ +D+ V ++ + MYA+ G    A++I
Sbjct: 277 QSIYASVFRSCAGLSALKVGTQLHAHALK--CDFGSDITVGTATLDMYAKCGSLADAQRI 334

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ- 344
           F++  + + + +N +I G V+N    EA++ F Q+L    + F++++   A SA + ++ 
Sbjct: 335 FNSLPKHSLQCYNAIIVGCVRNEKGFEALQFF-QLLLKSGLGFNEISLSGAFSACASIKG 393

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
           +LD G+QLH+  +K+ +   + V N++++                    RD VSWN +I+
Sbjct: 394 DLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIA 452

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           A  QNG ++E L L   M +     D  T  ++L A S+ +  + G + H  +++ G+  
Sbjct: 453 AHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGL-- 510

Query: 445 EGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
            G++S+    LIDMY K G+I+ A++I ++ +   +   +WNA+IAG+T     E+A   
Sbjct: 511 -GLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQ--QTMVSWNAIIAGFTLLKHSEDAHSF 567

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +ML+ +V P+  T A VL AC  + ++ LGKQ+HG  I+  L  +V++ ++L+DMYSK
Sbjct: 568 FYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSK 627

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  +A VF K P K+ VT+  MI GY QHG+ E AL  F  M+   + P+  TFV++
Sbjct: 628 CGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSI 687

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L AC++ G +D+GL  F+ M  EY ++P  EHY C+ D++GR G++ EA + ++E+  E 
Sbjct: 688 LRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEA 747

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           + + IW +LL  C++HG+ E+AE     +L+++  +S     +LLSNIYA+ G W  V +
Sbjct: 748 DAV-IWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSAC--ILLSNIYADAGMWGKVSE 804

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +RK MR   L+KE GCSWI+V   V+ F   ++ HP+  +IY++L  L  EM+  G
Sbjct: 805 MRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIG 860



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 169/661 (25%), Positives = 298/661 (45%), Gaps = 54/661 (8%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+S +++ C++  +L+ GK  H   I     P  ++ N L+ MY  C     A  V  K 
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 169 VEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            + D   Y             +L  + F    +R+VV+WN+++S +++     +++  F 
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 216 MMLR---MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
            M R   +G   +T  F  V  A S L D      V+GL+V++G  +  D+   S+ + M
Sbjct: 165 DMGRSEEVGFDQTT--FAVVLKACSVLEDGGLGIQVHGLIVRMG--FYKDVVTGSALLDM 220

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA+    D + KIF     +N   W+ +I G VQN+  +  +ELF ++ ++  I      
Sbjct: 221 YAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVG-IGVSQSI 279

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV--------------------LNAVI 372
           + S   + + L  L +G QLHA+ +K      + V                     N++ 
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           +  +  +N +I   V+N    E L     + K G   + ++++   SA ++++    G+Q
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399

Query: 433 THAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            H+  ++  +     + + ++DMY K   +  A  +F++ +   RD  +WNA+IA + QN
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMER--RDAVSWNAVIAAHEQN 457

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  EE    F  ML   + P+  T  SVL AC+    +  G ++H   I+  L  + FVG
Sbjct: 458 GNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG 517

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +LIDMY K G+I  A  +  +I ++  V++  +I G+     SE A S F  M    ++
Sbjct: 518 GALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVK 577

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEA 669
           PD  T+  VL AC+    V  G QI     Q  K++  ++ Y    + DM  + G + ++
Sbjct: 578 PDNFTYAIVLDACANLASVGLGKQIHG---QIIKLELHSDVYITSTLVDMYSKCGNMQDS 634

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
               ++   +  V   W +++     HG   L E        M   N  P +   +S + 
Sbjct: 635 ALVFEKAPNKDFV--TWNAMICGYAQHG---LGEEALGYFERMQLENVRPNHATFVSILR 689

Query: 730 A 730
           A
Sbjct: 690 A 690



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 149/611 (24%), Positives = 281/611 (45%), Gaps = 60/611 (9%)

Query: 140 PSRFVYNSLLNMYSTC-LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
            SR +YN  L +++ C +S+L      L      +S     C  +++++         IV
Sbjct: 12  ASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIV 71

Query: 199 SWYVKTERYVEAVRQFRMMLRMGIRPSTISFV-NVFPALSSLGDYKSADVVYGLLVKLGS 257
           S ++  + Y+        +++M +R S +++   VF  +S                    
Sbjct: 72  SGFI-PDVYIS-----NCLMKMYLRCSHLNYAYKVFEKMSQ------------------- 106

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
               D+   ++ I  YA+ G  + A + F +  +R+   WN+M+ G++QN    ++I++F
Sbjct: 107 ---RDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVF 163

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
           + +   +E+ FD  TF   L A S L++  LG Q+H  I++      V+  +A+++    
Sbjct: 164 LDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAK 223

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           ++ V W+ +I+  VQN     GL L  EMQK G  +      ++
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
             + + L    VG Q HA+ L+     +  + +  +DMYAK G +  A++IF  N     
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIF--NSLPKH 341

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
               +NA+I G  +N    EA   F+ +L+  +  N ++++    AC  +     G+QLH
Sbjct: 342 SLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLH 401

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
             S++  L  N+ V  S++DMY K   ++ A  +F ++  +++V++  +I  + Q+G  E
Sbjct: 402 SLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEE 461

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC-- 654
             L+LF SM    +EPD  T+ +VL ACS    ++ G++I + +    K     + +   
Sbjct: 462 ETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI---IKSGLGLDSFVGG 518

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            + DM  + G + EA +    +  E   +  W +++    L  HSE A     ++L+M  
Sbjct: 519 ALIDMYCKCGMIEEAKKIHDRI--EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576

Query: 715 RNSMPGYHVLL 725
           +     Y ++L
Sbjct: 577 KPDNFTYAIVL 587


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 244/729 (33%), Positives = 396/729 (54%), Gaps = 53/729 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TY SVL+ CAE ++L  GK VH                   ++ S+   ++D E++G K 
Sbjct: 59  TYCSVLQLCAELKSLEDGKRVH-------------------SIISSNGMAID-EVLGAKL 98

Query: 169 VEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           V +  +  DLV   ++FD +    +  WN ++S Y K   Y E+V  F  M  +GIR  +
Sbjct: 99  VFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDS 158

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  V    ++    +    V+G ++KLG    N   V +S I  Y + G  + AR +F
Sbjct: 159 YTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNA--VVNSLIAAYFKCGEVESARILF 216

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   +R+   WN+MI G   N      +E F+Q+L L  +  D  T ++ L A + +  L
Sbjct: 217 DELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG-VDVDSATLVNVLVACANVGNL 275

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
            LG+ LHAY +K   +  V+  N ++                    E  +VSW ++I+A 
Sbjct: 276 TLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAH 335

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
           V+ GL  E + L  EMQ +G   D   VT+++ A +   + D G++ H ++ ++ +    
Sbjct: 336 VREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNL 395

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L++MYAK G ++ A  IF +     ++  +WN MI GY+QN L  EA   F  M 
Sbjct: 396 PVSNALMNMYAKCGSMEEANLIFSQLPV--KNIVSWNTMIGGYSQNSLPNEALQLFLDM- 452

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +  + P+ VT+A VLPAC  +  +E G+++HG  +R     ++ V  +L+DMY K G++ 
Sbjct: 453 QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLV 512

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  +F  IP+K+ + +T MI GYG HG  + A+S F  M+  GIEP+  +F ++L AC+
Sbjct: 513 LAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACT 572

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++GL+ EG ++FD M+ E  I+P  EHY C+ D+L R G +  AY+F++ +  + +   I
Sbjct: 573 HSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDA-AI 631

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LL  CR+H   ELAE VA+ + E++  N+   Y+VLL+N+YAE   WE V K+++ +
Sbjct: 632 WGALLSGCRIHHDVELAEKVAEHIFELEPENTR--YYVLLANVYAEAEKWEEVKKIQRRI 689

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG-NKTIQNSN 804
            + GL+ + GCSWI+V G  N F + D  HPQ+  I  +L +L M+M   G +  I+ + 
Sbjct: 690 SKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYAL 749

Query: 805 VDATPRFDE 813
           ++A  R  E
Sbjct: 750 INADDRLKE 758



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 160/646 (24%), Positives = 287/646 (44%), Gaps = 86/646 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++FD I      +WN ++  +       E++ L+ +M++       D+YT++ VLK  
Sbjct: 111 GRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELG--IRGDSYTFTCVLKGF 168

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A +  +R  K VH + ++        V NSL+  Y  C              EV+ ++  
Sbjct: 169 AASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKC-------------GEVESARI- 214

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD +  R+VV+WN+++S           +  F  ML +G+   + + VNV  A +
Sbjct: 215 ----LFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACA 270

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++G+      ++   VK G  +   +   ++ + MY++ G  + A ++F    E     W
Sbjct: 271 NVGNLTLGRALHAYGVKAG--FSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSW 328

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I  +V+     EAI LF + ++   +  D     S + A +    LD G+++H +I 
Sbjct: 329 TSIIAAHVREGLHYEAIGLFDE-MQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIK 387

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           KN +   + V NA++                     +++VSWNTMI  + QN L +E L 
Sbjct: 388 KNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQ 447

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  +MQKQ    D VT+  +L A + L   + G++ H ++LR G +F  +     L+DMY
Sbjct: 448 LFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKG-YFSDLHVACALVDMY 505

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K GL+  A+Q+F+      +D   W  MIAGY  +G  +EA   F +M    + P   +
Sbjct: 506 VKCGLLVLAQQLFDMIPK--KDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESS 563

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             S+L AC   G ++ G +L                     M S+        N+  K+ 
Sbjct: 564 FTSILYACTHSGLLKEGWKL------------------FDSMKSE-------CNIEPKLE 598

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                 Y  M+    + G   RA     +M    I+PDA  + A+LS C     V+   +
Sbjct: 599 H-----YACMVDLLIRSGNLSRAYKFIETMP---IKPDAAIWGALLSGCRIHHDVELAEK 650

Query: 636 IFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           +    +  ++++P +T +Y  +A++     K  E  +  + + + G
Sbjct: 651 V---AEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGG 693



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 213/470 (45%), Gaps = 73/470 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR LFD ++    V WN++I G   N      +  + QM         D+ T  +
Sbjct: 207 GEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG--VDVDSATLVN 264

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   NL +G+A+H + ++   +      N+LL+MYS C +   A           
Sbjct: 265 VLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGAN---------- 314

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF  M    +V+W +I++ +V+   + EA+  F  M   G+RP   +  +V
Sbjct: 315 --------EVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSV 366

Query: 233 FPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
             A +          V+  + K  +GS    +L V+++ + MYA+ G  + A  IF    
Sbjct: 367 VHACACSNSLDKGREVHNHIKKNNMGS----NLPVSNALMNMYAKCGSMEEANLIFSQLP 422

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            +N   WNTMIGGY QN+ P EA++LF+ + +  ++  DDVT    L A + L  L+ G+
Sbjct: 423 VKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK--QLKPDDVTMACVLPACAGLAALEKGR 480

Query: 351 QLHAYIIKN---------------FVALPVIVL-----NAVIERDVVSWNTMISAFVQNG 390
           ++H +I++                +V   ++VL     + + ++D++ W  MI+ +  +G
Sbjct: 481 EIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHG 540

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMES 449
              E +    +M+  G   +  + T++L A            TH+ LL+ G   F+ M+S
Sbjct: 541 FGKEAISTFEKMRVAGIEPEESSFTSILYAC-----------THSGLLKEGWKLFDSMKS 589

Query: 450 ------------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                        ++D+  +SG +  A +  E       D A W A+++G
Sbjct: 590 ECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPI-KPDAAIWGALLSG 638



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 23/207 (11%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           P   + ++   + G    A  +F  +     V WNT+I G+  N+LP EA+ L+  M+K 
Sbjct: 396 PVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ 455

Query: 100 -SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
             P    D+ T + VL ACA    L  G+ +H H +R        V  +L++MY  C   
Sbjct: 456 LKP----DDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKC--- 508

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                 GL           L  ++FD + +++++ W  +++ Y       EA+  F  M 
Sbjct: 509 ------GLLV---------LAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMR 553

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSA 245
             GI P   SF ++  A +  G  K  
Sbjct: 554 VAGIEPEESSFTSILYACTHSGLLKEG 580


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/761 (31%), Positives = 399/761 (52%), Gaps = 52/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + +   V WN +I G   +  P EA+  +  M+      S  + +  ++    
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS--SVSLLNLFPGI 240

Query: 118 AETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            +  N+ + +++H + F R FS+    V N L+++YS C                     
Sbjct: 241 CKLSNIELCRSIHGYVFRRDFSSA---VSNGLIDLYSKC------------------GDV 279

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D+  +VFD M  ++ V+W T+++ Y     +VE +  F  M    +R + +S V+ F A 
Sbjct: 280 DVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAA 339

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +   D +    ++G    L     +D+ VA+  + MYA+ G  + A+++F     R+   
Sbjct: 340 AETIDLEKGKEIHG--CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ +I   VQ  +P EA+ LF Q ++  ++  + VT +S L A + L  L LG+ +H + 
Sbjct: 398 WSAIIAALVQTGYPEEALSLF-QEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456

Query: 357 IK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K                     F    +   N +  RD+V+WN++I+ + Q G     +
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            + Y+++      D+ T+  ++ A + L + D G   H  +++ G   +  +++ LIDMY
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G + +A  +F K D   +D+ TWN +IA Y QNG  +EA  +F QM   N  PN VT
Sbjct: 577 AKCGSLPSAEFLFNKTDF-TKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             SVLPA   +     G   H   I+     N  VG SLIDMY+K G ++Y+  +F ++ 
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 695

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K++V++  M+ GY  HG  +RA++LF  M+   ++ D+++FV+VLSAC +AGLV+EG +
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRK 755

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           IF  M  +Y I+P  EHY C+ D+LGR G   E   F+K +  E +   +WG+LLGSCR+
Sbjct: 756 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA-GVWGALLGSCRM 814

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + +L EV    L++++ RN  P + V+LS+IYA+ G W +  K R +M + GL+K  G
Sbjct: 815 HSNVKLGEVALDHLVKLEPRN--PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSW+++   V+ F   D+ HPQ   ++ +   L  +M   G
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913



 Score =  288 bits (738), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 195/670 (29%), Positives = 336/670 (50%), Gaps = 56/670 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVL 114
           LAR +FDS   P+ ++WN++I  +  +    EA+ +Y  M  K   P    D YT++ VL
Sbjct: 81  LARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP----DKYTFTFVL 136

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC    NL+ G   H    R       F+   L++MYS        +M  LK       
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS--------KMGDLKRAR---- 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD M +R+VVAWN +++   ++E   EAV  FR M  +G+ PS++S +N+FP
Sbjct: 185 ------EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            +  L + +    ++G + +          V++  I +Y++ G  D AR++FD  ++++ 
Sbjct: 239 GICKLSNIELCRSIHGYVFRRDFSSA----VSNGLIDLYSKCGDVDVARRVFDQMVDQDD 294

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W TM+ GY  N   VE +ELF + ++L  +  + V+ +SA  A ++  +L+ G+++H 
Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDK-MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 355 YIIKN------FVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDE 394
             ++        VA P++V+ A              +  RD+V+W+ +I+A VQ G  +E
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            L L  EMQ Q    + VT+ ++L A ++L    +GK  H + ++  +  +    + L+ 
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G    A   F +  S  RD  TWN++I GY Q G    A   F ++    + P+ 
Sbjct: 474 MYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDA 531

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            T+  V+PAC  + +++ G  +HG  ++   + +  V  +LIDMY+K G +  A  +F K
Sbjct: 532 GTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591

Query: 574 IP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
               K+ VT+  +I  Y Q+G ++ A+S F  M+     P+++TFV+VL A +Y     E
Sbjct: 592 TDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 651

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G+     + Q      +T     + DM  + G++  + +   E+  +  V   W ++L  
Sbjct: 652 GMAFHACIIQ-MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTV--SWNAMLSG 708

Query: 693 CRLHGHSELA 702
             +HGH + A
Sbjct: 709 YAVHGHGDRA 718



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 276/553 (49%), Gaps = 34/553 (6%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + K DL   VFD+    + + WN+++  Y ++++Y EA+  +  M+  G+ P   +F  V
Sbjct: 76  FHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFV 135

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +   + +     +G + + G E   D+F+ +  + MY+++G    AR++FD   +R
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLE--RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR 193

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI G  Q+  P EA++ F + ++L  +    V+ L+    + +L  ++L + +
Sbjct: 194 DVVAWNAMIAGLSQSEDPCEAVDFF-RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSI 252

Query: 353 HAYIIKNFVALPVI------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           H Y+ +   +  V                   V + ++++D VSW TM++ +  NG   E
Sbjct: 253 HGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
            L L  +M+     I+ V+  +   AA+   + + GK+ H   L+  I  + +  + L+ 
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G  + A+Q+F       RD   W+A+IA   Q G  EEA   F++M    + PN 
Sbjct: 373 MYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNR 430

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+ S+LPAC  +  ++LGK +H F+++  +D ++  GT+L+ MY+K G    A   F +
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++ VT+ ++I GY Q G    A+ +F  ++   I PDA T V V+ AC+    +D+G
Sbjct: 491 MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
             I  L+     ++   E  C V     DM  + G +  A EF+    +       W  +
Sbjct: 551 TCIHGLI-----VKLGFESDCHVKNALIDMYAKCGSLPSA-EFLFNKTDFTKDEVTWNVI 604

Query: 690 LGSCRLHGHSELA 702
           + +   +GH++ A
Sbjct: 605 IAAYMQNGHAKEA 617



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/652 (24%), Positives = 297/652 (45%), Gaps = 86/652 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD +     V W T++ G+  N    E + L+ +MK  +     +  +  S
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN--VRINKVSAVS 334

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
              A AET +L  GK +H   ++   +    V   L+ MY+ C  +  A+          
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK---------- 384

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F  ++ R++VAW+ I++  V+T    EA+  F+ M    ++P+ ++ +++
Sbjct: 385 --------QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA + L   K    ++   VK  ++  +DL   ++ + MYA+ G F  A   F+    R
Sbjct: 437 LPACADLSLLKLGKSIHCFTVK--ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN++I GY Q   P  AI++F + L L  I  D  T +  + A + L +LD G  +
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCI 553

Query: 353 HAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGL 391
           H  I+K        V NA+I+                     +D V+WN +I+A++QNG 
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESY 450
             E +   ++M+ + F  +SVT  ++L AA+ L     G   HA +++ G     +  + 
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMYAK G +  + ++F + D   +D  +WNAM++GY  +G  + A   F  M E  V 
Sbjct: 674 LIDMYAKCGQLDYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 511 PNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            + V+  SVL AC   G +E G+++ H  S +Y +  ++     ++D+  ++G+ +    
Sbjct: 732 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
               +P                                  +EPDA  + A+L +C     
Sbjct: 792 FIKVMP----------------------------------VEPDAGVWGALLGSCRMHSN 817

Query: 630 VDEGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           V  G    D +    K++P +  H+  ++ +  + G+  +A +   ++ + G
Sbjct: 818 VKLGEVALDHL---VKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 186/387 (48%), Gaps = 24/387 (6%)

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           I +Y+     D AR +FD+    +  +WN+MI  Y ++    EA+E++  ++E   +  D
Sbjct: 70  INLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVE-KGLEPD 128

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLN 369
             TF   L A +    L  G   H  I +       F+   ++              V +
Sbjct: 129 KYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD 188

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
            + +RDVV+WN MI+   Q+    E +     MQ  G    SV++  L      L N ++
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248

Query: 430 GKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            +  H Y+ R       + + LID+Y+K G +  AR++F++    D+D  +W  M+AGY 
Sbjct: 249 CRSIHGYVFRRDFS-SAVSNGLIDLYSKCGDVDVARRVFDQ--MVDQDDVSWGTMMAGYA 305

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
            NG   E    F +M   NV  N V+  S   A     ++E GK++HG +++  +D ++ 
Sbjct: 306 HNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V T L+ MY+K G    A  +F  +  ++ V ++ +I    Q G  E ALSLF+ M+   
Sbjct: 366 VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++P+ +T +++L AC+   L+  G  I
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSI 452



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 432 QTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           Q HA ++  G       ++LI++Y+       AR +F+   +  R    WN+MI  YT++
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSR--ILWNSMIRAYTRS 107

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
               EA   +  M+E  + P+  T   VL AC    N++ G   HG   R  L+++VF+G
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             L+DMYSK G +  A  VF K+P+++ V +  MI G  Q      A+  FRSM+  G+E
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 612 PDAITFV 618
           P +++ +
Sbjct: 228 PSSVSLL 234



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 505 LEHNVTPNVVTIASVLPAC---NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           L  +   N +    +L +C   NP+  I     + GF   + +       T LI++YS  
Sbjct: 24  LSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSI-------THLINLYSLF 76

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
              + A +VF   P  + + + +MI  Y +      AL ++  M   G+EPD  TF  VL
Sbjct: 77  HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136

Query: 622 SACSYAGLVDEGL 634
            AC+ A  + EG+
Sbjct: 137 KACTGALNLQEGV 149


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 241/638 (37%), Positives = 371/638 (58%), Gaps = 35/638 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPALSSLGD 241
           F  ++R+N+ +WN++VS YV+  RY +++     +L + G+RP   +F  V  A  SL D
Sbjct: 106 FKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD 165

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
               + ++  ++K+G E+  D++VA+S I +Y+  G  + A K+F +   R+   WN MI
Sbjct: 166 ---GEKMHCWVLKMGFEH--DVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMI 220

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            G+ QN +  EA+ +  + ++ +E+  D VT  S L   +Q  ++  G  +H Y+IK+ +
Sbjct: 221 SGFCQNGNVAEALRVLDR-MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGL 279

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              V V NA+I                     RD+VSWN++I+A+ QN      L    E
Sbjct: 280 ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKE 339

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFE-GMESYLIDMYAKSG 459
           M   G   D +TV +L S    L ++ +G+  H +++R   +  +  + + L++MYAK G
Sbjct: 340 MLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLG 399

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIAS 518
            I  AR +FE+  S  RD  +WN +I GY QNGL  EA  A+  M E   + PN  T  S
Sbjct: 400 SIDCARAVFEQLPS--RDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVS 457

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +LPA + +G ++ G ++HG  I+  L  +VFV T LIDMY K G +  A ++F +IP++ 
Sbjct: 458 ILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET 517

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           SV +  +I   G HG  E+AL LF+ M+  G++ D ITFV++LSACS++GLVDE    FD
Sbjct: 518 SVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFD 577

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            MQ+EY+I+P+ +HY C+ D+ GR G + +AY  V  +  + +   IWG+LL +CR+HG+
Sbjct: 578 TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADA-SIWGTLLAACRIHGN 636

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           +EL    + +LLE+D+ N   GY+VLLSNIYA  G WE   KVR   R+RGLRK  G S 
Sbjct: 637 AELGTFASDRLLEVDSENV--GYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSS 694

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + VG  V  F + +Q HPQ  +IYE L  L  +M++ G
Sbjct: 695 VVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLG 732



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/624 (23%), Positives = 297/624 (47%), Gaps = 57/624 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H+L   + K +   + ++L  +    G   L+   F  I R     WN+++  +V   
Sbjct: 69  QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRG 128

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +++   +++   S     D YT+  VLKAC    +L  G+ +HC  ++       +V
Sbjct: 129 RYRDSMDCVTELLSLSGVRP-DFYTFPPVLKACL---SLADGEKMHCWVLKMGFEHDVYV 184

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SL+++YS                   +   ++  KVF  M  R+V +WN ++S + + 
Sbjct: 185 AASLIHLYSR------------------FGAVEVAHKVFVDMPVRDVGSWNAMISGFCQN 226

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               EA+R    M    ++  T++  ++ P  +   D     +V+  ++K G E  +D+F
Sbjct: 227 GNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLE--SDVF 284

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V+++ I MY++ G    A+++FD    R+   WN++I  Y QN+ PV A+  F ++L + 
Sbjct: 285 VSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG 344

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVI----------- 372
            +  D +T +S  S   QL +  +G+ +H ++++  ++ + +++ NA++           
Sbjct: 345 -MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDC 403

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAA 421
                     RDV+SWNT+I+ + QNGL  E +   Y M ++G  I  +  T  ++L A 
Sbjct: 404 ARAVFEQLPSRDVISWNTLITGYAQNGLASEAID-AYNMMEEGRTIVPNQGTWVSILPAY 462

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S++     G + H  L+++ +  +  + + LIDMY K G ++ A  +F   +        
Sbjct: 463 SHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFY--EIPQETSVP 520

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFS 539
           WNA+I+    +G  E+A   F+ M    V  + +T  S+L AC+  G ++  +       
Sbjct: 521 WNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQ 580

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
             Y +  N+     ++D++ ++G +  A N+ + +P + ++  + T++     HG +E  
Sbjct: 581 KEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAE-- 638

Query: 599 LSLFRSMKGCGIEPDAITFVAVLS 622
           L  F S +   ++ + + +  +LS
Sbjct: 639 LGTFASDRLLEVDSENVGYYVLLS 662


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 243/720 (33%), Positives = 394/720 (54%), Gaps = 62/720 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLD 160
           D  T  SVL+ CA++++L+ GK V  +FIR     + FV +S L      MY+ C    +
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVD-NFIR----GNGFVLDSNLGSKLALMYTNCGDLKE 147

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   +VFD ++    + WN +++   K+  +  ++  F+ M+  
Sbjct: 148 AS------------------RVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+   + +F  V  + SSL      + ++G ++K G    N   V +S +  Y +    D
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNS--VGNSLVAFYLKNHRVD 247

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            ARK+FD   ER+   WN++I GYV N    + + +FVQ+L    I  D  T +S  +  
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-FSGIEIDLATIVSVFAGC 306

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           +  + + LG+ +H + +K   +      N +++                    R VVS+ 
Sbjct: 307 ADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYT 366

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MI+ + + GL  E + L  EM+++G   D  TVTA+L+  +  R  D GK+ H ++  +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKEN 426

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            + F+  + + L+DMYAK G ++ A  +F +     +D  +WN +I GY++N    EA  
Sbjct: 427 DMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV--KDIISWNTVIGGYSKNCYANEALS 484

Query: 500 AFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLID 556
            F  +L E   +P+  T+A VLPAC  +   + G+++HG+ +R  Y  D++V    SL+D
Sbjct: 485 LFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHV--ANSLVD 542

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY+K G +  A  +F  I  K+ V++T MI GYG HG  + A++LF  M+  GIEPD I+
Sbjct: 543 MYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEIS 602

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           FV++L ACS++GLVDEG + F++M+ E KI+P+ EHY C+ DML R G + +AY F++ +
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENM 662

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
               +   IWG+LL  CR+H   +LAE VA+K+ E++  N+  GY+VL++NIYAE   WE
Sbjct: 663 PIPPDA-TIWGALLCGCRIHHDVKLAERVAEKVFELEPENT--GYYVLMANIYAEAEKWE 719

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V ++RK + +RGLRK  GCSWI++ G VN F + D  +P++ KI   L  +   M   G
Sbjct: 720 EVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEG 779



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 163/651 (25%), Positives = 297/651 (45%), Gaps = 94/651 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     + WN ++     +     +I L+ +M  S      D+YT+S V K+ 
Sbjct: 148 ASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSCVSKSF 205

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  R++  G+ +H + ++        V NSL+  Y             LK   VD ++  
Sbjct: 206 SSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFY-------------LKNHRVDSAR-- 250

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP--A 235
              KVFD M  R+V++WN+I++ YV      + +  F  ML  GI     + V+VF   A
Sbjct: 251 ---KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCA 307

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S L     A   +G+      E   D F  ++ + MY++ G  D A+ +F     R+  
Sbjct: 308 DSRLISLGRAVHCFGVKACFSRE---DRF-CNTLLDMYSKCGDLDSAKVVFREMSGRSVV 363

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            + +MI GY +     EA++LF + +E + I  D  T  + L+  ++ + LD G+++H +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLF-EEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEW 422

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           I +N +   + V NA+++                    +D++SWNT+I  + +N   +E 
Sbjct: 423 IKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEA 482

Query: 396 LMLV-YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
           L L    + ++ F  D  TV  +L A ++L   D G++ H Y++R+G   +  + + L+D
Sbjct: 483 LSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G +  AR +F+  D   +D  +W  MIAGY  +G  +EA   F QM +  + P+ 
Sbjct: 543 MYAKCGALLLARLLFD--DITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDE 600

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           ++  S+L AC+  G ++ G +   F+I      ++  V     ++DM +++G ++ A   
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRF--FNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRF 658

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
              +P                                  I PDA  + A+L  C     V
Sbjct: 659 IENMP----------------------------------IPPDATIWGALLCGCRIHHDV 684

Query: 631 DEGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
               ++    ++ ++++P +T +Y  +A++     K  E     K +G+ G
Sbjct: 685 KLAERV---AEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRG 732



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR LFD IT    V W  +I G+  +    EAI L++QM+++      D  ++ S+L A
Sbjct: 552 LARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG--IEPDEISFVSLLYA 609

Query: 117 CAET 120
           C+ +
Sbjct: 610 CSHS 613


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/707 (32%), Positives = 390/707 (55%), Gaps = 48/707 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D     S+LK C +++ L+ GK +H   +      +  +  SL+N+Y +C     A++V 
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV- 60

Query: 166 LKYVEVDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IR 223
                            F T+    ++  WN +++   K   ++E +  F  +L    ++
Sbjct: 61  -----------------FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLK 103

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   ++ +V  A S LG      +V+  ++K G  +  D+ V SSA+ MYA+   F+ A 
Sbjct: 104 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG--FAMDVVVMSSAVGMYAKCNVFEDAI 161

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K+FD   ER+   WN +I  Y Q+  P +A+ELF + +++     D VT  + +S+ ++L
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEE-MKVSGFKPDSVTLTTVISSCARL 220

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
            +L+ G+++H  ++++  AL   V +A+++                    ++VVSWN+MI
Sbjct: 221 LDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMI 280

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + +   G     + L   M ++G      T++++L A S   N  +GK  H Y++R+ + 
Sbjct: 281 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 340

Query: 444 FE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + S LID+Y K G I +A  +F+  +    +  +WN MI+GY + G   EA V F 
Sbjct: 341 ADIFVNSSLIDLYFKCGNIGSAENVFQ--NMPKTNVVSWNVMISGYVKVGSYLEALVIFT 398

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            M +  V P+ +T  SVLPAC+ +  +E GK++H F I   L+ N  V  +L+DMY+K G
Sbjct: 399 DMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCG 458

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A ++F ++PE++ V++T+MI  YG HG +  AL LF  M+    +PD +TF+A+LS
Sbjct: 459 AVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILS 518

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+AGLVDEG   F+ M  EY  +P+ EHY C+ D+LGRVG++ EAYE ++   +    
Sbjct: 519 ACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIRED 578

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +  +L  +C LH   +L E + + L+E D  +  P  +++LSN+YA    W+ V KVR
Sbjct: 579 VGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDD--PSTYIILSNMYASVKKWDEVRKVR 636

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
            +++E GL+K  GCSWI+VG  ++ F  +D+ HPQ+  IYE +  LA
Sbjct: 637 LKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILA 683



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 182/651 (27%), Positives = 298/651 (45%), Gaps = 87/651 (13%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +F +I  P  + +WN ++     N +  E + ++ ++    PY   D +TY SVLKA
Sbjct: 57  AKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHF-PYLKPDAFTYPSVLKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+    +  GK VH H I+        V +S + MY+ C    DA               
Sbjct: 116 CSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDA--------------- 160

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+FD M  R+V +WN ++S Y +  +  +A+  F  M   G +P +++   V  + 
Sbjct: 161 ---IKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L D +    ++  LV+ G  +  D FV+S+ + MY + GC + A+++F+    +N   
Sbjct: 218 ARLLDLERGKEIHMELVRSG--FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAY 355
           WN+MI GY         IELF ++ E  E +   +T LS+ L A S+   L LG+ +H Y
Sbjct: 276 WNSMIAGYSLKGDSKSCIELFRRMDE--EGIRPTLTTLSSILMACSRSVNLQLGKFIHGY 333

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           II+N V   + V +++I+                     +VVSWN MIS +V+ G   E 
Sbjct: 334 IIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEA 393

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDM 454
           L++  +M+K G   D++T T++L A S L   + GK+ H +++   +   E +   L+DM
Sbjct: 394 LVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDM 453

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G +  A  IF  N   +RD  +W +MIA Y  +G   EA   F +M + +  P+ V
Sbjct: 454 YAKCGAVDEALHIF--NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKV 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T  ++L AC+  G ++ G       I  Y     V   + LID+  + G +  A  +  +
Sbjct: 512 TFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 571

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            P+                                 I  D      + SAC     +D G
Sbjct: 572 TPD---------------------------------IREDVGLLSTLFSACHLHKKLDLG 598

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF---VKELGEEGN 681
            QI  L+ ++    PST  Y  +++M   V K  E  +    +KELG + N
Sbjct: 599 EQIGRLLIEKDPDDPST--YIILSNMYASVKKWDEVRKVRLKIKELGLKKN 647


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/765 (31%), Positives = 406/765 (53%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+ LFDS+     V WN+++  ++ N    ++I ++++M+        D  T++ 
Sbjct: 118 GNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLE--IQHDYATFAV 175

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC    +  +G  VHC  I+   +       +L++MYSTC                 
Sbjct: 176 VLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC----------------- 218

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             K D    +F  M  RN V W+ +++ YV+ +R+ E ++ +++ML  G+  S  +F + 
Sbjct: 219 -KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F + + L  ++    ++   +K    Y N   V ++ + MYA+      ARK+F+     
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDN--IVGTATLDMYAKCDRMVDARKVFNTFPNP 335

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
             +  N +I GY + +  +EA+E+F + L+   + FD+++   AL+A S ++    G QL
Sbjct: 336 TRQSHNALIVGYARQDQVLEALEIF-RSLQKSYLDFDEISLSGALTACSAIKGYLEGIQL 394

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H   +K  +   + V N +++                    +D VSWN +I+A  QN   
Sbjct: 395 HGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHV 454

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           +E L L   M +     D  T  +++ A +  +  + G + H  +++ G+  +  + S +
Sbjct: 455 EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAI 514

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           IDMY K G++  A +I E+ +  +R   +WN++I+G++     E A   F +ML+  V P
Sbjct: 515 IDMYCKCGMLVEAEKIHERLE--ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T A+VL  C  +  +ELGKQ+HG  ++  L  +V++ ++++DMYSK G +  +  +F
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMF 632

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            K P+++ VT++ MI  Y  HG+ E A+ LF  M+   ++P+   F++VL AC++ G VD
Sbjct: 633 EKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVD 692

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +GL  F  M+  Y + P  EHY C+ D+LGR G+V EA E ++ +  E + + IW +LLG
Sbjct: 693 KGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDV-IWRTLLG 751

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            CRL G+ E+AE  A  LL++D ++S    +VLLSN+YA  G W  V K+R  M+   L+
Sbjct: 752 ICRLQGNVEVAEKAANSLLQLDPQDSSA--YVLLSNVYAIAGMWGEVAKIRSFMKNYKLK 809

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCSWI V   V+ F   D+ HP+S +IY+    L  EM+  G
Sbjct: 810 KEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDG 854



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 178/676 (26%), Positives = 306/676 (45%), Gaps = 85/676 (12%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+S + + C+  + +  GK  H         P+ FV N LL  Y  CL+        L Y
Sbjct: 40  TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLN--------LNY 91

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNT-------------------------IVSW--- 200
                        VFD M +R+V++WNT                         +VSW   
Sbjct: 92  A----------FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSM 141

Query: 201 ---YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
              Y++   + +++  F  M  + I+    +F  V  A + + DY     V+ L +++G 
Sbjct: 142 LSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG- 200

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            + +D+   ++ + MY+     D A  IF    ERN+  W+ +I GYV+N+   E ++L+
Sbjct: 201 -FDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLY 259

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVIVLNAV 371
             +L+ + +     TF SA  + + L   +LG QLHAY +K      N V    + + A 
Sbjct: 260 KVMLD-EGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAK 318

Query: 372 IERDV--------------VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            +R V               S N +I  + +     E L +   +QK     D ++++  
Sbjct: 319 CDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGA 378

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L+A S ++    G Q H   ++ G+ F   + + ++DMYAK G +  A  IF+  D   +
Sbjct: 379 LTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFD--DMEIK 436

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WNA+IA + QN  +EE    F  ML   + P+  T  SV+ AC     +  G ++H
Sbjct: 437 DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVH 496

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           G  I+  +  + FVG+++IDMY K G++  A  +  ++ E+ +V++ ++I G+      E
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGE 556

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC- 655
            ALS F  M   G+ PD  T+  VL  C+    V+ G QI     Q  K+Q  ++ Y   
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG---QILKLQLHSDVYIAS 613

Query: 656 -VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            + DM  + G + ++    ++  +   V   W +++ +   HG   L E   K   EM  
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAPKRDYV--TWSAMICAYAYHG---LGEDAIKLFEEMQL 668

Query: 715 RNSMPGYHVLLSNIYA 730
           +N  P + + +S + A
Sbjct: 669 QNVKPNHTIFISVLRA 684



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/521 (24%), Positives = 239/521 (45%), Gaps = 70/521 (13%)

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           ++F ++F   S+L         +  +   G  +V  +FV++  +  Y +    ++A  +F
Sbjct: 39  LTFSHIFQKCSNLKAINPGKQAHAQITVTG--FVPTVFVSNCLLQFYCKCLNLNYAFNVF 96

Query: 287 DNCLERNTEVWNTMIGG-------------------------------YVQNNHPVEAIE 315
           D   +R+   WNTMI G                               Y+QN    ++IE
Sbjct: 97  DKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIE 156

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--- 372
           +F + + L EI  D  TF   L A + +++  LG Q+H   I+      V+   A++   
Sbjct: 157 IFTK-MRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMY 215

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                            ER+ V W+ +I+ +V+N    EGL L   M  +G  +   T  
Sbjct: 216 STCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFA 275

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSG 474
           +   + + L   ++G Q HAY L+    ++ +  +  +DMYAK   +  AR++F  N   
Sbjct: 276 SAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVF--NTFP 333

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           +  + + NA+I GY +   + EA   FR + +  +  + ++++  L AC+ +     G Q
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           LHG +++  LD N+ V  +++DMY+K G +  A  +F  +  K++V++  +I  + Q+  
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEH 453

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKIQPS 649
            E  L+LF SM    +EPD  TF +V+ AC+    ++ G+++        M  ++ +  +
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSA 513

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
                 + DM  + G +VEA +  + L E   V   W S++
Sbjct: 514 ------IIDMYCKCGMLVEAEKIHERLEERTTV--SWNSII 546



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 20/191 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    A ++ + +   TTV WN+II GF        A+  +S+M +       DN+T
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP--DNFT 576

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y++VL  CA    + +GK +H   ++   +   ++ +++++MYS C +  D+ +      
Sbjct: 577 YATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRI------ 630

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +F+   +R+ V W+ ++  Y       +A++ F  M    ++P+   F
Sbjct: 631 ------------MFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678

Query: 230 VNVFPALSSLG 240
           ++V  A + +G
Sbjct: 679 ISVLRACAHMG 689


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 241/720 (33%), Positives = 395/720 (54%), Gaps = 62/720 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLD 160
           D  T  SVL+ CA++++L+ GK V  +FIR     + FV +S L      MY+ C    +
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVD-NFIR----GNGFVIDSNLGSKLSLMYTNCGDLKE 147

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   +VFD ++    + WN +++   K+  +  ++  F+ M+  
Sbjct: 148 AS------------------RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+   + +F  V  + SSL      + ++G ++K G    N   V +S +  Y +    D
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVD 247

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            ARK+FD   ER+   WN++I GYV N    + + +FVQ+L +  I  D  T +S  +  
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGC 306

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           +  + + LG+ +H+  +K   +      N ++                    +R VVS+ 
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MI+ + + GL  E + L  EM+++G   D  TVTA+L+  +  R  D GK+ H ++  +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            + F+  + + L+DMYAK G ++ A  +F +     +D  +WN +I GY++N    EA  
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALS 484

Query: 500 AFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLID 556
            F  +LE    +P+  T+A VLPAC  +   + G+++HG+ +R  Y  D++  V  SL+D
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH--VANSLVD 542

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY+K G +  A  +F  I  K+ V++T MI GYG HG  + A++LF  M+  GIE D I+
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           FV++L ACS++GLVDEG + F++M+ E KI+P+ EHY C+ DML R G +++AY F++ +
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
               +   IWG+LL  CR+H   +LAE VA+K+ E++  N+  GY+VL++NIYAE   WE
Sbjct: 663 PIPPDAT-IWGALLCGCRIHHDVKLAEKVAEKVFELEPENT--GYYVLMANIYAEAEKWE 719

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V ++RK + +RGLRK  GCSWI++ G VN F + D  +P++  I   L ++   M   G
Sbjct: 720 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 155/649 (23%), Positives = 294/649 (45%), Gaps = 90/649 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     + WN ++     +     +I L+ +M  S      D+YT+S V K+ 
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSCVSKSF 205

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  R++  G+ +H   ++        V NSL+  Y             LK   VD ++  
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY-------------LKNQRVDSAR-- 250

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD M  R+V++WN+I++ YV      + +  F  ML  GI     + V+VF   +
Sbjct: 251 ---KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                     V+ + VK  + +  +    ++ + MY++ G  D A+ +F    +R+   +
Sbjct: 308 DSRLISLGRAVHSIGVK--ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            +MI GY +     EA++LF + +E + I  D  T  + L+  ++ + LD G+++H +I 
Sbjct: 366 TSMIAGYAREGLAGEAVKLF-EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +N +   + V NA+++                    +D++SWNT+I  + +N   +E L 
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484

Query: 398 LV-YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
           L    ++++ F  D  TV  +L A ++L   D G++ H Y++R+G   +  + + L+DMY
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G +  A  +F+  D   +D  +W  MIAGY  +G  +EA   F QM +  +  + ++
Sbjct: 545 AKCGALLLAHMLFD--DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602

Query: 516 IASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             S+L AC+  G ++ G +   F+I      ++  V     ++DM +++G +  A     
Sbjct: 603 FVSLLYACSHSGLVDEGWRF--FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            +P                                  I PDA  + A+L  C     V  
Sbjct: 661 NMP----------------------------------IPPDATIWGALLCGCRIHHDVKL 686

Query: 633 GLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             ++    ++ ++++P +T +Y  +A++     K  +     K +G+ G
Sbjct: 687 AEKV---AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA  LFD I     V W  +I G+  +    EAI L++QM+++      D  ++ S+L A
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG--IEADEISFVSLLYA 609

Query: 117 CAET 120
           C+ +
Sbjct: 610 CSHS 613


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 254/774 (32%), Positives = 399/774 (51%), Gaps = 53/774 (6%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD I  P  V W++++  +  N LP  AI  +  M+       C+ +    V
Sbjct: 52  RPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG--VCCNEFALPVV 109

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK   + R   +G  VH   +        FV N+L+ MY       DA  V   + E D 
Sbjct: 110 LKCVPDAR---LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRV---FNEAD- 162

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                          RN V+WN ++S YVK ++  +A++ F  M+  GI+P+   F  V 
Sbjct: 163 -------------SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVV 209

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +   + ++   V+ ++V++G  Y  D+F A++ + MY ++G  D A  IF+   + +
Sbjct: 210 NACTGSRNIEAGRQVHAMVVRMG--YDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN +I G V N H   AIEL +Q ++   +V +  T  S L A S     DLG+Q+H
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQ-MKYSGLVPNVFTLSSILKACSGAGAFDLGRQIH 326

Query: 354 AYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
            ++IK      +++ + ++              V + +  RD++  N +IS     G  D
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L YE++K+G  ++  T+ A+L + ++L      +Q HA  ++ G  F+  + + LI
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D Y K   +  A ++FE+  SGD    T  +MI   +Q    E A   F +ML   + P+
Sbjct: 447 DSYWKCSCLSDANRVFEECSSGDIIACT--SMITALSQCDHGEGAIKLFMEMLRKGLEPD 504

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
              ++S+L AC  +   E GKQ+H   I+     + F G +L+  Y+K G I  A   F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFS 564

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            +PE+  V+++ MI G  QHG  +RAL LF  M   GI P+ IT  +VL AC++AGLVDE
Sbjct: 565 SLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             + F+ M++ + I  + EHY C+ D+LGR GK+ +A E V  +  + N   IWG+LLG+
Sbjct: 625 AKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA-SIWGALLGA 683

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
            R+H   EL ++ A+KL  ++   S  G HVLL+N YA  G W  V KVRK M++  ++K
Sbjct: 684 SRVHKDPELGKLAAEKLFILEPEKS--GTHVLLANTYASAGMWNEVAKVRKLMKDSNIKK 741

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           E   SWI+V   V+ F   D+ HP + +IY  L  L   M  AG   + N +VD
Sbjct: 742 EPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAG--FVPNVDVD 793



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 201/461 (43%), Gaps = 56/461 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +A  +F+ +     V WN +I G V N   + AI L  QMK S    +   +T SS
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNV--FTLSS 308

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKAC+      +G+ +H   I+  ++   ++   L++MY+      DA           
Sbjct: 309 ILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR---------- 358

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVFD M  R+++  N ++S      R+ EA+  F  + + G+  +  +   V
Sbjct: 359 --------KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAV 410

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +SL    +   V+ L VK+G  ++ D  V +  I  Y +  C   A ++F+ C   
Sbjct: 411 LKSTASLEAASTTRQVHALAVKIG--FIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSG 468

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +     +MI    Q +H   AI+LF+++L    +  D     S L+A + L   + G+Q+
Sbjct: 469 DIIACTSMITALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA++IK          NA++                    ER VVSW+ MI    Q+G  
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-HFEGMESY 450
              L L   M  +G   + +T+T++L A ++    D  K+    +    GI   E   S 
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647

Query: 451 LIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIA 486
           +ID+  ++G +  A ++     F+ N S       W A++ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANAS------IWGALLG 682


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 260/805 (32%), Positives = 409/805 (50%), Gaps = 54/805 (6%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           LP  H  +  +      + R+ L S   +  RP  AR+ FD I  P  V W++++  +  
Sbjct: 21  LPGAHLHASLLKSGSLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N LP  AI  +  M+       C+ +    VLK   + R   +G  VH   +        
Sbjct: 81  NGLPRSAIQAFHGMRAEG--VCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDV 135

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV N+L+ MY       DA  V   + E D                RN V+WN ++S YV
Sbjct: 136 FVANALVAMYGGFGFMDDARRV---FNEAD--------------SERNAVSWNGLMSAYV 178

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           K ++  +A++ F  M+  GI+P+   F  V  A +   + ++   V+ ++V++G  Y  D
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG--YDKD 236

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +F A++ + MY ++G  D A  IF+   + +   WN +I G V N H   AIEL +Q ++
Sbjct: 237 VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ-MK 295

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI---------- 366
              +V +  T  S L A S     DLG+Q+H ++IK      +++ + ++          
Sbjct: 296 YSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLD 355

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               V + +  RD++  N +IS     G  DE L L YE++K+G  ++  T+ A+L + +
Sbjct: 356 DARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTA 415

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           +L      +Q HA  ++ G  F+  + + LID Y K   +  A ++FE+  SGD    T 
Sbjct: 416 SLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT- 474

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            +MI   +Q    E A   F +ML   + P+   ++S+L AC  +   E GKQ+H   I+
Sbjct: 475 -SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                + F G +L+  Y+K G I  A   F+ +PE+  V+++ MI G  QHG  +RAL L
Sbjct: 534 RQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALEL 593

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  M   GI P+ IT  +VL AC++AGLVDE  + F+ M++ + I  + EHY C+ D+LG
Sbjct: 594 FGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLG 653

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R GK+ +A E V  +  + N   IWG+LLG+ R+H   EL ++ A+KL  ++   S  G 
Sbjct: 654 RAGKLDDAMELVNSMPFQANA-SIWGALLGASRVHKDPELGKLAAEKLFILEPEKS--GT 710

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           HVLL+N YA  G W  V KVRK M++  ++KE   SWI+V   V+ F   D+ HP + +I
Sbjct: 711 HVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEI 770

Query: 782 YEMLERLAMEMRNAGNKTIQNSNVD 806
           Y  L  L   M  AG   + N +VD
Sbjct: 771 YAKLVELGDLMSKAG--FVPNVDVD 793


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/765 (30%), Positives = 415/765 (54%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+ LFDS+     V WN+++  ++ N +  ++I ++ +M+  S     D  T++ 
Sbjct: 86  GNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR--SLKIPHDYATFAV 143

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKAC+   +  +G  VHC  I+          ++L++MYS C                 
Sbjct: 144 ILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC----------------- 186

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             K D   +VF  M  RN+V W+ +++ YV+ +R++E ++ F+ ML++G+  S  ++ +V
Sbjct: 187 -KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F + + L  +K    ++G  +K  S++  D  + ++ + MYA+      A K+F+     
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALK--SDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNP 303

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
             + +N +I GY + +  ++A+++F Q L+ + + FD+++   AL+A S ++    G QL
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIF-QSLQRNNLGFDEISLSGALTACSVIKRHLEGIQL 362

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H   +K  +   + V N +++                    RD VSWN +I+A  QN   
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            + L L   M +     D  T  +++ A +  +  + G + H  +++ G+  +  + S L
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSAL 482

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G++  A +I  + +  ++   +WN++I+G++     E A   F QMLE  + P
Sbjct: 483 VDMYGKCGMLMEAEKIHARLE--EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T A+VL  C  M  IELGKQ+H   ++  L  +V++ ++L+DMYSK G +  +  +F
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            K P+++ VT++ MI  Y  HG+ E+A++LF  M+   ++P+   F++VL AC++ G VD
Sbjct: 601 EKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +GL  F  M   Y + P  EHY C+ D+LGR G+V EA + ++ +  E + + IW +LL 
Sbjct: 661 KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDV-IWRTLLS 719

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C++ G+ E+AE     LL++D ++S    +VLL+N+YA  G W  V K+R  M+   L+
Sbjct: 720 NCKMQGNVEVAEKAFNSLLQLDPQDSSA--YVLLANVYAIVGMWGEVAKMRSIMKNCKLK 777

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCSWI+V   V+ F   D+ HP+S +IYE    L  EM+ AG
Sbjct: 778 KEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 179/676 (26%), Positives = 304/676 (44%), Gaps = 85/676 (12%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+S +L+ C+  + L  GK VH   I     P+ +V N LL  Y  C SS          
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFY--CKSS---------- 55

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNT-------------------------IVSW--- 200
                 K +   KVFD M +R+V++WNT                         +VSW   
Sbjct: 56  ------KMNYAFKVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSL 109

Query: 201 ---YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
              Y+      +++  F  M  + I     +F  +  A S + DY     V+ L +++G 
Sbjct: 110 LSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGF 169

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           E  ND+   S+ + MY++    D A ++F    ERN   W+ +I GYVQN+  +E ++LF
Sbjct: 170 E--NDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLF 227

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
             +L++   V    T+ S   + + L    LG QLH + +K+  A   I+  A +     
Sbjct: 228 KDMLKVGMGV-SQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAK 286

Query: 373 -ERDVVSW--------------NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            ER   +W              N +I  + +     + L +   +Q+     D ++++  
Sbjct: 287 CERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGA 346

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L+A S ++    G Q H   ++ G+ F   + + ++DMY K G +  A  IFE+ +   R
Sbjct: 347 LTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER--R 404

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WNA+IA + QN  + +    F  ML   + P+  T  SV+ AC     +  G ++H
Sbjct: 405 DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIH 464

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           G  I+  +  + FVG++L+DMY K G++  A  + A++ EK +V++ ++I G+     SE
Sbjct: 465 GRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSE 524

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC- 655
            A   F  M   GI PD  T+  VL  C+    ++ G QI     Q  K+Q  ++ Y   
Sbjct: 525 NAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIH---AQILKLQLHSDVYIAS 581

Query: 656 -VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            + DM  + G + ++    ++  +   V   W +++ +   HG   L E       EM  
Sbjct: 582 TLVDMYSKCGNMQDSRLMFEKAPKRDYV--TWSAMICAYAYHG---LGEKAINLFEEMQL 636

Query: 715 RNSMPGYHVLLSNIYA 730
            N  P + + +S + A
Sbjct: 637 LNVKPNHTIFISVLRA 652



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 251/543 (46%), Gaps = 70/543 (12%)

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           ++F ++    S+L        V+  ++  G  +V  ++VA+  +  Y +    ++A K+F
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTG--FVPTIYVANCLLQFYCKSSKMNYAFKVF 64

Query: 287 DNCLERNTEVWNTMIGG-------------------------------YVQNNHPVEAIE 315
           D   +R+   WNT+I G                               Y+ N    ++IE
Sbjct: 65  DRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--- 372
           +FV++  L +I  D  TF   L A S +++  LG Q+H   I+      V+  +A++   
Sbjct: 125 IFVRMRSL-KIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                            ER++V W+ +I+ +VQN    EGL L  +M K G  +   T  
Sbjct: 184 SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSG 474
           ++  + + L    +G Q H + L+    ++  + +  +DMYAK   +  A ++F  N   
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVF--NTLP 301

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           +  + ++NA+I GY +     +A   F+ +  +N+  + ++++  L AC+ +     G Q
Sbjct: 302 NPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQ 361

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           LHG +++  L  N+ V  +++DMY K G +  A  +F ++  +++V++  +I  + Q+  
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEE 421

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKIQPS 649
             + LSLF SM    +EPD  T+ +V+ AC+    ++ G +I        M  ++ +  +
Sbjct: 422 IVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSA 481

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
                 + DM G+ G ++EA +    L E+  V   W S++        SE A+    ++
Sbjct: 482 ------LVDMYGKCGMLMEAEKIHARLEEKTTV--SWNSIISGFSSQKQSENAQRYFSQM 533

Query: 710 LEM 712
           LEM
Sbjct: 534 LEM 536


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 254/816 (31%), Positives = 430/816 (52%), Gaps = 58/816 (7%)

Query: 4   SSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLF 62
           SS+   L     T      QL ++HSL   +    +    ++L +K      P  +  +F
Sbjct: 17  SSISRALASAATTT-----QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 71

Query: 63  DSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
              +    V +WN+II     N L  EA+ LYS+ ++       D YT+ SV+ ACA   
Sbjct: 72  RLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQP--DTYTFPSVINACAGLL 129

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           +  + K++H   +        ++ N+L++MY              ++ ++D ++     K
Sbjct: 130 DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYC-------------RFNDLDKAR-----K 171

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+ M  R+VV+WN+++S Y     + EA+  +     +G+ P + +  +V  A   LG 
Sbjct: 172 VFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGS 231

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +  D+++GL+ K+G +   D+ V +  + MY +       R+IFD  + R+   WNTMI
Sbjct: 232 VEEGDIIHGLIEKIGIK--KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMI 289

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q     E+I+LF++++  ++   D +T  S L A   L +L+ G+ +H Y+I +  
Sbjct: 290 CGYSQVGLYEESIKLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 347

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                  N +I                     +D VSWN+MI+ ++QNG  DE + L ++
Sbjct: 348 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKL-FK 406

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGL 460
           M K     DSVT   LLS ++ L +  +GK+ H  L + G +   + S  L+DMYAK G 
Sbjct: 407 MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGE 466

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  + ++FE   +  RD  TWN +IA    +           +M    VTP++ T+ S+L
Sbjct: 467 MGDSLKVFENMKA--RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSIL 524

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
           P C+ +     GK++HG   +  L+ +V VG  LI+MYSK G +  +  VF  +  K+ V
Sbjct: 525 PVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVV 584

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           T+T +I   G +G  ++A+  F  M+  GI PD + FVA++ ACS++GLV+EGL  F  M
Sbjct: 585 TWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRM 644

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           +++YKI+P  EHY CV D+L R   + +A +F+  +  + +   IWG+LL +CR+ G +E
Sbjct: 645 KKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS-SIWGALLSACRMSGDTE 703

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           +AE V+++++E++  ++  GY+VL+SNIYA  G W+ V  +RK ++ RGL+K+ GCSW++
Sbjct: 704 IAERVSERIIELNPDDT--GYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWME 761

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   V  F +  +   Q  ++ ++L  LA  M   G
Sbjct: 762 IQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEG 797


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/761 (31%), Positives = 397/761 (52%), Gaps = 52/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + +   V WN +I G   +  P EA+  +  M+      S  + +  ++    
Sbjct: 183 AREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS--SVSLLNLFPGI 240

Query: 118 AETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            +  N+ + +++H + F R FS+    V N L+++YS C                     
Sbjct: 241 CKLSNIELCRSIHGYVFRRDFSSA---VSNGLIDLYSKC------------------GDV 279

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D+  +VFD M  ++ V+W T+++ Y     +VE +  F  M    +R + +S V+ F A 
Sbjct: 280 DVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAA 339

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +   D +    ++G    L     +D+ VA+  + MYA+ G  + A+++F     R+   
Sbjct: 340 AETIDLEKGKEIHG--CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVA 397

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ +I   VQ  +P EA+ LF Q ++  ++  + VT +S L A + L  L LG+ +H + 
Sbjct: 398 WSAIIAALVQTGYPEEALSLF-QEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFT 456

Query: 357 IK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K                     F    +   N +  RD+V+WN++I+ + Q G     +
Sbjct: 457 VKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAI 516

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            + Y+++      D+ T+  ++ A + L + D G   H  +++ G   +  +++ LIDMY
Sbjct: 517 DMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMY 576

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G + +A  +F K D   +D+ TWN +IA Y QNG  +EA  +F QM   N  PN VT
Sbjct: 577 AKCGSLPSAEFLFNKTDF-TKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             SVLPA   +     G   H   I+     N  VG SLIDMY+K G + Y+  +F ++ 
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD 695

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K++V++  M+ GY  HG  +RA++LF  M+   ++ D+++FV+VLSAC + GLV+EG +
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRK 755

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           IF  M  +Y I+P  EHY C+ D+LGR G   E   F+K +  E +   +WG+LLGSCR+
Sbjct: 756 IFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA-GVWGALLGSCRM 814

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + +L EV    L++++ RN  P + V+LS+IYA+ G W +  K R +M + GL+K  G
Sbjct: 815 HSNVKLGEVALDHLVKLEPRN--PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPG 872

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSW+++   V+ F   D+ HPQ   ++ +   L  +M   G
Sbjct: 873 CSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 195/670 (29%), Positives = 336/670 (50%), Gaps = 56/670 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVL 114
           LAR +FDS   P+ ++WN++I  +  +    EA+ +Y  M  K   P    D YT++ VL
Sbjct: 81  LARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEP----DKYTFTFVL 136

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC    NL+ G   H    R       F+   L++MYS        +M  LK       
Sbjct: 137 KACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYS--------KMGDLKRAR---- 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD M +R+VVAWN +++   ++E   EAV  FR M  +G+ PS++S +N+FP
Sbjct: 185 ------EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFP 238

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            +  L + +    ++G + +          V++  I +Y++ G  D AR++FD  ++++ 
Sbjct: 239 GICKLSNIELCRSIHGYVFRRDFSSA----VSNGLIDLYSKCGDVDVARRVFDQMVDQDD 294

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W TM+ GY  N   VE +ELF + ++L  +  + V+ +SA  A ++  +L+ G+++H 
Sbjct: 295 VSWGTMMAGYAHNGCFVEVLELFDK-MKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 355 YIIKN------FVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDE 394
             ++        VA P++V+ A              +  RD+V+W+ +I+A VQ G  +E
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            L L  EMQ Q    + VT+ ++L A ++L    +GK  H + ++  +  +    + L+ 
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G    A   F +  S  RD  TWN++I GY Q G    A   F ++    + P+ 
Sbjct: 474 MYAKCGFFTAALTTFNRMSS--RDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDA 531

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            T+  V+PAC  + +++ G  +HG  ++   + +  V  +LIDMY+K G +  A  +F K
Sbjct: 532 GTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNK 591

Query: 574 IP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
               K+ VT+  +I  Y Q+G ++ A+S F  M+     P+++TFV+VL A +Y     E
Sbjct: 592 TDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFRE 651

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G+     + Q      +T     + DM  + G++  + +   E+  +  V   W ++L  
Sbjct: 652 GMAFHACIIQ-MGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTV--SWNAMLSG 708

Query: 693 CRLHGHSELA 702
             +HGH + A
Sbjct: 709 YAVHGHGDRA 718



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 276/553 (49%), Gaps = 34/553 (6%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + K DL   VFD+    + + WN+++  Y ++++Y EA+  +  M+  G+ P   +F  V
Sbjct: 76  FHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFV 135

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +   + +     +G + + G E   D+F+ +  + MY+++G    AR++FD   +R
Sbjct: 136 LKACTGALNLQEGVWFHGEIDRRGLE--RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR 193

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI G  Q+  P EA++ F + ++L  +    V+ L+    + +L  ++L + +
Sbjct: 194 DVVAWNAMIAGLSQSEDPCEAVDFF-RSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSI 252

Query: 353 HAYIIKNFVALPVI------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           H Y+ +   +  V                   V + ++++D VSW TM++ +  NG   E
Sbjct: 253 HGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVE 312

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
            L L  +M+     I+ V+  +   AA+   + + GK+ H   L+  I  + +  + L+ 
Sbjct: 313 VLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMV 372

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G  + A+Q+F       RD   W+A+IA   Q G  EEA   F++M    + PN 
Sbjct: 373 MYAKCGETEKAKQLFWGLQG--RDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNR 430

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+ S+LPAC  +  ++LGK +H F+++  +D ++  GT+L+ MY+K G    A   F +
Sbjct: 431 VTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++ VT+ ++I GY Q G    A+ +F  ++   I PDA T V V+ AC+    +D+G
Sbjct: 491 MSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQG 550

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
             I  L+     ++   E  C V     DM  + G +  A EF+    +       W  +
Sbjct: 551 TCIHGLI-----VKLGFESDCHVKNALIDMYAKCGSLPSA-EFLFNKTDFTKDEVTWNVI 604

Query: 690 LGSCRLHGHSELA 702
           + +   +GH++ A
Sbjct: 605 IAAYMQNGHAKEA 617



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/652 (24%), Positives = 297/652 (45%), Gaps = 86/652 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD +     V W T++ G+  N    E + L+ +MK  +     +  +  S
Sbjct: 277 GDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN--VRINKVSAVS 334

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
              A AET +L  GK +H   ++   +    V   L+ MY+ C  +  A+          
Sbjct: 335 AFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAK---------- 384

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F  ++ R++VAW+ I++  V+T    EA+  F+ M    ++P+ ++ +++
Sbjct: 385 --------QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA + L   K    ++   VK  ++  +DL   ++ + MYA+ G F  A   F+    R
Sbjct: 437 LPACADLSLLKLGKSIHCFTVK--ADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR 494

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN++I GY Q   P  AI++F + L L  I  D  T +  + A + L +LD G  +
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYK-LRLSAINPDAGTMVGVVPACALLNDLDQGTCI 553

Query: 353 HAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGL 391
           H  I+K        V NA+I+                     +D V+WN +I+A++QNG 
Sbjct: 554 HGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESY 450
             E +   ++M+ + F  +SVT  ++L AA+ L     G   HA +++ G     +  + 
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMYAK G +  + ++F + D   +D  +WNAM++GY  +G  + A   F  M E  V 
Sbjct: 674 LIDMYAKCGQLXYSEKLFNEMDH--KDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 511 PNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            + V+  SVL AC   G +E G+++ H  S +Y +  ++     ++D+  ++G+ +    
Sbjct: 732 IDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
               +P                                  +EPDA  + A+L +C     
Sbjct: 792 FIKVMP----------------------------------VEPDAGVWGALLGSCRMHSN 817

Query: 630 VDEGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           V  G    D +    K++P +  H+  ++ +  + G+  +A +   ++ + G
Sbjct: 818 VKLGEVALDHL---VKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLG 866



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 186/387 (48%), Gaps = 24/387 (6%)

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           I +Y+     D AR +FD+    +  +WN+MI  Y ++    EA+E++  ++E   +  D
Sbjct: 70  INLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVE-KGLEPD 128

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLN 369
             TF   L A +    L  G   H  I +       F+   ++              V +
Sbjct: 129 KYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFD 188

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
            + +RDVV+WN MI+   Q+    E +     MQ  G    SV++  L      L N ++
Sbjct: 189 KMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIEL 248

Query: 430 GKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            +  H Y+ R       + + LID+Y+K G +  AR++F++    D+D  +W  M+AGY 
Sbjct: 249 CRSIHGYVFRRDFS-SAVSNGLIDLYSKCGDVDVARRVFDQ--MVDQDDVSWGTMMAGYA 305

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
            NG   E    F +M   NV  N V+  S   A     ++E GK++HG +++  +D ++ 
Sbjct: 306 HNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V T L+ MY+K G    A  +F  +  ++ V ++ +I    Q G  E ALSLF+ M+   
Sbjct: 366 VATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQK 425

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++P+ +T +++L AC+   L+  G  I
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSI 452



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 2/187 (1%)

Query: 432 QTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           Q HA ++  G       ++LI++Y+       AR +F+   +  R    WN+MI  YT++
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSR--ILWNSMIRAYTRS 107

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
               EA   +  M+E  + P+  T   VL AC    N++ G   HG   R  L+++VF+G
Sbjct: 108 KQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIG 167

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             L+DMYSK G +  A  VF K+P+++ V +  MI G  Q      A+  FRSM+  G+E
Sbjct: 168 AGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVE 227

Query: 612 PDAITFV 618
           P +++ +
Sbjct: 228 PSSVSLL 234



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 505 LEHNVTPNVVTIASVLPAC---NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           L  +   N +    +L +C   NP+  I     + GF   + +       T LI++YS  
Sbjct: 24  LSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSI-------THLINLYSLF 76

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
              + A +VF   P  + + + +MI  Y +      AL ++  M   G+EPD  TF  VL
Sbjct: 77  HKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVL 136

Query: 622 SACSYAGLVDEGL 634
            AC+ A  + EG+
Sbjct: 137 KACTGALNLQEGV 149


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/666 (33%), Positives = 374/666 (56%), Gaps = 39/666 (5%)

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
             ++T L+SL A+   L+             KVFD     NV  WN+ +  Y + +++ E
Sbjct: 36  TFFATKLNSLYAKCASLQAAR----------KVFDETPHPNVHLWNSTLRSYCREKQWEE 85

Query: 210 AVRQFRMML-RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
            +R F +M+   G  P   +      A + L   +   V++G   K   E  +D+FV S+
Sbjct: 86  TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGF-AKKNDEIGSDMFVGSA 144

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + +Y++ G    A K+F+     +T +W +M+ GY QNN P EA+ LF Q++ +D +V 
Sbjct: 145 LVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVL 204

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
           D VT +S +SA +QL  +  G  +H  +I+      + ++N+++                
Sbjct: 205 DPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLF 264

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
               E+DV+SW+TMI+ +  N   +E L L +EM ++ F  +SVTV + L A +  RN +
Sbjct: 265 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLE 324

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            GK+ H   +  G   +  + + LIDMY K      A  +F++     +D  +W A+++G
Sbjct: 325 EGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPK--KDVVSWVALLSG 382

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           Y QNG+  ++   FR ML   + P+ V +  +L A + +G  +    LHG+ +R   + N
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-K 606
           VFVG SLI++YSK G +  A  +F  +  ++ V +++MI  YG HG    AL +F  M K
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
              + P+ +TF+++LSACS+AGLV+EGL+IFD M  +Y+++P +EH+  + D+LGR+G++
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQL 562

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            +A + +  +        +WG+LLG+CR+H + E+ E  AK L  +D   S  GY++LLS
Sbjct: 563 GKAMDIINRMPIPAGP-HVWGALLGACRIHHNIEMGEAAAKNLFWLDP--SHAGYYILLS 619

Query: 727 NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           NIYA +G W+NV ++R  ++ERGL+K  G S ++V G V+ F + D+ HP S KIYE+L 
Sbjct: 620 NIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLR 679

Query: 787 RLAMEM 792
           +L  +M
Sbjct: 680 KLEAQM 685



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 160/419 (38%), Positives = 237/419 (56%), Gaps = 6/419 (1%)

Query: 379  WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            WN MI  F  +G     L L  +M ++G   D       L + + L +   GK  H +L+
Sbjct: 786  WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845

Query: 439  RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
              G   +  +++ L+DMYAK G I+ AR +F+K     RD  +W +MI+GY  NG   E 
Sbjct: 846  CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDK--MAVRDLVSWTSMISGYAHNGYNSET 903

Query: 498  FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
               F  M    V PN V+I SVL AC  +G +  G+  H + I+   + ++ V T+++DM
Sbjct: 904  LGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDM 963

Query: 558  YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
            YSK G ++ A  +F +   K+ V ++ MI  YG HG   +A+ LF  M   G+ P  +TF
Sbjct: 964  YSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTF 1023

Query: 618  VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
              VLSACS++GL++EG   F LM +E+ I     +Y C+ D+LGR G++ EA + ++ + 
Sbjct: 1024 TCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMP 1083

Query: 678  EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
             E +   IWGSLLG+CR+H + +LAE +A  L  +D  ++  GYHVLLSNIYA +  W  
Sbjct: 1084 VEPDA-SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHA--GYHVLLSNIYAAKSRWNE 1140

Query: 738  VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V+KVRK M  RG  K  G S ++    V++F   D+ HPQ  K+Y  LE LA  M++ G
Sbjct: 1141 VEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLG 1199



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 230/471 (48%), Gaps = 48/471 (10%)

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           ++D F A+    +YA+      ARK+FD     N  +WN+ +  Y +     E + LF  
Sbjct: 33  LHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHL 92

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNA-- 370
           ++       D+ T   AL A + L+ L+LG+ +H +  KN       FV   ++ L +  
Sbjct: 93  MICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC 152

Query: 371 --------VIER----DVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTAL 417
                   V E     D V W +M++ + QN   +E L L  +M      ++D VT+ ++
Sbjct: 153 GQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSV 212

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSG 474
           +SA + L N   G   H  ++R    F+G   + + L+++YAK+G  K A  +F K    
Sbjct: 213 VSACAQLLNVKAGSCVHGLVIRR--EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP-- 268

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           ++D  +W+ MIA Y  N    EA   F +M+E    PN VT+ S L AC    N+E GK+
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  ++    + +  V T+LIDMY K    + A ++F ++P+K+ V++  ++ GY Q+GM
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGM 388

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
           + +++ +FR+M   GI+PDA+  V +L+A S  G+  + L +       Y ++       
Sbjct: 389 AYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCL-----HGYVVRSGFNSNV 443

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLE--------IWGSLLGSCRLHG 697
            V         ++E Y     LG+   + +        IW S++ +  +HG
Sbjct: 444 FVG------ASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 488



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 260/549 (47%), Gaps = 61/549 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD    P   +WN+ +  + C    +E  L    +   +   + DN+T    LKAC
Sbjct: 55  ARKVFDETPHPNVHLWNSTLRSY-CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKAC 113

Query: 118 AETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           A  R L +GK +H    +        FV ++L+ +YS C    +A               
Sbjct: 114 AGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEA--------------- 158

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPA 235
               KVF+  +R + V W ++V+ Y +     EA+  F  M+ M  +    ++ V+V  A
Sbjct: 159 ---LKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSA 215

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            + L + K+   V+GL+++   E+  DL + +S + +YA+ GC   A  +F    E++  
Sbjct: 216 CAQLLNVKAGSCVHGLVIR--REFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVI 273

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+TMI  Y  N    EA+ LF +++E      + VT +SAL A +  + L+ G+++H  
Sbjct: 274 SWSTMIACYANNEAANEALNLFHEMIE-KRFEPNSVTVVSALQACAVSRNLEEGKKIHKI 332

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            +     L   V  A+I+                    +DVVSW  ++S + QNG+  + 
Sbjct: 333 AVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKS 392

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLI 452
           + +   M   G   D+V V  +L+A+S L         H Y++R G +   F G  + LI
Sbjct: 393 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVG--ASLI 450

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTP 511
           ++Y+K G +  A ++F+      RD   W++MIA Y  +G   EA   F QM++++ V P
Sbjct: 451 ELYSKCGSLGDAVKLFKGMIV--RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRP 508

Query: 512 NVVTIASVLPACNPMGNIELG-----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           N VT  S+L AC+  G +E G     + +H + +R   D   F    ++D+  + G +  
Sbjct: 509 NNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRP--DSEHF--GIMVDLLGRIGQLGK 564

Query: 567 AANVFAKIP 575
           A ++  ++P
Sbjct: 565 AMDIINRMP 573



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 186/405 (45%), Gaps = 40/405 (9%)

Query: 54   RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYS 111
            R   A  +F+ I  P + +WN +I GF  +     ++ LYS+M  K   P    D + + 
Sbjct: 767  RIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKP----DKFAFP 822

Query: 112  SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
              LK+CA   +L+ GK +H H + C  +   FV  +L++MY+ C    D E   L     
Sbjct: 823  FALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC---GDIEAARL----- 874

Query: 172  DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                      VFD M  R++V+W +++S Y       E +  F +M   G+ P+ +S ++
Sbjct: 875  ----------VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILS 924

Query: 232  VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
            V  A  +LG  +  +  +  +++ G E+  D+ VA++ + MY++ G  D AR +FD    
Sbjct: 925  VLLACGNLGALRKGEWFHSYVIQTGFEF--DILVATAIMDMYSKCGSLDLARCLFDETAG 982

Query: 292  RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            ++   W+ MI  Y  + H  +AI+LF Q+++   +    VTF   LSA S    L+ G+ 
Sbjct: 983  KDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAG-VRPSHVTFTCVLSACSHSGLLEEGKM 1041

Query: 352  LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                + + F          VI R + ++  M+    + G   E + L+  M  +    D+
Sbjct: 1042 YFQLMTEEF----------VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEP---DA 1088

Query: 412  VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
                +LL A     N D+ ++   +L        G    L ++YA
Sbjct: 1089 SIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYA 1133



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 163/327 (49%), Gaps = 26/327 (7%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--K 97
           P + S L+   + G   +A  LF  +     + W+T+I  +  N    EA+ L+ +M  K
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           +  P    ++ T  S L+ACA +RNL  GK +H   +         V  +L++MY  C  
Sbjct: 302 RFEP----NSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC-- 355

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                           S  D    +F  + +++VV+W  ++S Y +     +++  FR M
Sbjct: 356 ----------------SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNM 399

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           L  GI+P  ++ V +  A S LG ++ A  ++G +V+ G  + +++FV +S I +Y++ G
Sbjct: 400 LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG--FNSNVFVGASLIELYSKCG 457

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
               A K+F   + R+  +W++MI  Y  +    EA+E+F Q+++   +  ++VTFLS L
Sbjct: 458 SLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSIL 517

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALP 364
           SA S    ++ G ++   ++ ++   P
Sbjct: 518 SACSHAGLVEEGLKIFDRMVHDYQLRP 544



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 175/403 (43%), Gaps = 54/403 (13%)

Query: 119  ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKY-------- 168
            E++   IG A     I CFS                CL    A++   GL+Y        
Sbjct: 715  ESKYKTIGSAPGTDTISCFS----------------CLKKTHAKIFAYGLQYDSRILTKF 758

Query: 169  --VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
              + V +++ D    VF+ +       WN ++  +    R++ ++  +  M+  G++P  
Sbjct: 759  AIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDK 818

Query: 227  ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
             +F     + + L D +   V++  LV  G    NDLFV ++ + MYA+ G  + AR +F
Sbjct: 819  FAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS--NDLFVDAALVDMYAKCGDIEAARLVF 876

Query: 287  DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            D    R+   W +MI GY  N +  E +  F  ++    ++ + V+ LS L A   L  L
Sbjct: 877  DKMAVRDLVSWTSMISGYAHNGYNSETLGFF-DLMRSSGVIPNRVSILSVLLACGNLGAL 935

Query: 347  DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
              G+  H+Y+I+      ++V  A+++                    +D+V W+ MI+++
Sbjct: 936  RKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASY 995

Query: 387  VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
              +G   + + L  +M K G     VT T +LSA S+    + GK     +    +    
Sbjct: 996  GIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARK 1055

Query: 447  MESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            + +Y  ++D+  ++G +  A  + E N   + D + W +++  
Sbjct: 1056 LSNYACMVDLLGRAGQLSEAVDLIE-NMPVEPDASIWGSLLGA 1097



 Score = 46.2 bits (108), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 3/117 (2%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           TI S  P  + +      K+ H     Y L  +  + T    MY     I+ A+ VF  I
Sbjct: 720 TIGSA-PGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDI 778

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           P   S  +  MI G+   G    +L L+  M   G++PD   F   L +C  AGL D
Sbjct: 779 PNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSC--AGLSD 833


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 238/787 (30%), Positives = 422/787 (53%), Gaps = 55/787 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + L      G   +A++LFD++     V WN++I G++ N    + I ++
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            QM +    T  D  T++ VLK+C+   +   G  +H   ++   +      ++LL+MY+
Sbjct: 163 LQMGRMG--TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C                   K D   + F +M  +N V+W+ I++  V+ +     +  
Sbjct: 221 KC------------------KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F+ M + G+  S  +F +VF + + L   +    ++G  +K  +++  D+ + ++ + MY
Sbjct: 263 FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALK--TDFGTDVVIGTATLDMY 320

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            +      A+K+F++    N + +N +I GY +++  +EA+ +F ++L+   +  D+V+ 
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF-RLLQKSGLGLDEVSL 379

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
             A  A + ++    G Q+H   +K+     + V NA+++                    
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 439

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD VSWN +I+A  QNG +++ L L   M + G   D  T  ++L A +  +  + G + 
Sbjct: 440 RDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEI 499

Query: 434 HAYLLRHGIHFEGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           H  +++  +   G++S+    LIDMY+K G+++ A ++ ++    ++   +WNA+I+G++
Sbjct: 500 HNRIIKSRL---GLDSFVGIALIDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFS 554

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
                EEA   F +MLE  V P+  T A++L  C  +  +ELGKQ+H   I+  L  + +
Sbjct: 555 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 614

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           + ++L+DMYSK G +     +F K P ++ VT+  M+ GY QHG+ E AL +F  M+   
Sbjct: 615 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 674

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           ++P+  TF+AVL AC + GLV++GL  F  M   Y + P  EHY CV D++GR G+V +A
Sbjct: 675 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 734

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            E ++ +  E + + IW +LL  C++HG+ E+AE  A  +L+++  +S    +VLLSNIY
Sbjct: 735 LELIEGMPFEADAV-IWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA--YVLLSNIY 791

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A  G W  V K+RK MR  GL+KE GCSWI++   V+ F   D+ HP+S +IYE L+ L 
Sbjct: 792 ANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLT 851

Query: 790 MEMRNAG 796
            EM+  G
Sbjct: 852 DEMKWVG 858



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 184/716 (25%), Positives = 320/716 (44%), Gaps = 70/716 (9%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS-----CDNYT 109
           PH +R LF     P    +N        +  P++ + +       SP++S         T
Sbjct: 3   PHTSRHLF-----PIRFFFN------FQSKSPFKTLPI-------SPFSSYQATPTKKKT 44

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------LSSLDA-- 161
           +S + + C++ + L  GK  H   I     P+ FV N L+ MY  C          D   
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMP 104

Query: 162 --EMVGLKYVEVDYS---KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
             + V    +   Y+      +  K+FD M  R+VV+WN+++S Y+    + + +  F  
Sbjct: 105 QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQ 164

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M RMG      +F  V  + SSL D+     ++GL VK+G  +  D+   S+ + MYA+ 
Sbjct: 165 MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG--FDCDVVTGSALLDMYAKC 222

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
              D + + F +  E+N   W+ +I G VQN+     +ELF + ++   +     TF S 
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE-MQKAGVGVSQSTFASV 281

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIV--------------------LNAVIERDV 376
             + + L  L LG QLH + +K      V++                     N++   ++
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            S+N +I  + ++    E L +   +QK G  +D V+++    A + ++    G Q H  
Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGL 401

Query: 437 LLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            ++        + + ++DMY K G +  A  +FE+  S  RD  +WNA+IA + QNG  E
Sbjct: 402 SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS--RDAVSWNAIIAAHEQNGNEE 459

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           +    F  ML+  + P+  T  SVL AC     +  G ++H   I+  L  + FVG +LI
Sbjct: 460 KTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALI 519

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMYSK G++  A  +  ++ E+  V++  +I G+     SE A   F  M   G++PD  
Sbjct: 520 DMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 579

Query: 616 TFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           T+  +L  C+    V+ G QI   ++++E  +Q        + DM  + G  ++ ++ + 
Sbjct: 580 TYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGN-MQDFQLIF 636

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           E     + +  W +++     HG   L E   K    M   N  P +   L+ + A
Sbjct: 637 EKAPNRDFV-TWNAMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVLRA 688


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 247/758 (32%), Positives = 403/758 (53%), Gaps = 58/758 (7%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           + R +   WN+II  FV N L  +A+  Y +M       S D  T+  ++KAC   +N +
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG--VSPDVSTFPCLVKACVALKNFK 155

Query: 125 ----IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
               +   V    + C    + FV +SL+  Y                  ++Y K D+  
Sbjct: 156 GIDFLSDTVSSLGMDC----NEFVASSLIKAY------------------LEYGKIDVPS 193

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FD + +++ V WN +++ Y K       ++ F +M    I P+ ++F  V    +S  
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  ++GL+V  G ++     + +S + MY++ G FD A K+F      +T  WN M
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GYVQ+    E++  F +++    ++ D +TF S L +VS+ + L+  +Q+H YI+++ 
Sbjct: 312 ISGYVQSGLMEESLTFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370

Query: 361 VALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVY 400
           ++L + + +A+I+                     DVV +  MIS ++ NGL  + L +  
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
            + K     + +T+ ++L     L    +G++ H ++++ G      +   +IDMYAK G
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A +IFE+     RD  +WN+MI    Q+     A   FRQM    +  + V+I++ 
Sbjct: 491 RMNLAYEIFER--LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  + +   GK +HGF I++ L  +V+  ++LIDMY+K G +  A NVF  + EKN 
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608

Query: 580 VTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           V++ ++I   G HG  + +L LF  M +  GI PD ITF+ ++S+C + G VDEG++ F 
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M ++Y IQP  EHY CV D+ GR G++ EAYE VK +    +   +WG+LLG+CRLH +
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA-GVWGTLLGACRLHKN 727

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ELAEV + KL+++D  NS  GY+VL+SN +A    WE+V KVR  M+ER ++K  G SW
Sbjct: 728 VELAEVASSKLMDLDPSNS--GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           I++    + F S D  HP+S  IY +L  L  E+R  G
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 182/608 (29%), Positives = 301/608 (49%), Gaps = 45/608 (7%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S +L+AC+    LR GK VH   I    +   +    +L MY+ C S  D    G  +  
Sbjct: 39  SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC---GKMFYR 95

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           +D             +RR ++  WN+I+S +V+     +A+  +  ML  G+ P   +F 
Sbjct: 96  LD-------------LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A  +L ++K  D +   +  LG +  N+ FVASS I  Y E G  D   K+FD  L
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMD-CNE-FVASSLIKAYLEYGKIDVPSKLFDRVL 200

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +++  +WN M+ GY +       I+ F  V+ +D+I  + VTF   LS  +    +DLG 
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           QLH  ++ + V     + N+++                      D V+WN MIS +VQ+G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
           L +E L   YEM   G + D++T ++LL + S   N +  KQ H Y++RH I  +  + S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID Y K   +  A+ IF + +S   D   + AMI+GY  NGL  ++   FR +++  +
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNS--VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           +PN +T+ S+LP    +  ++LG++LHGF I+   D    +G ++IDMY+K G +N A  
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F ++ +++ V++ +MI    Q      A+ +FR M   GI  D ++  A LSAC+    
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
              G  I   M + + +         + DM  + G +  A    K + +E N++  W S+
Sbjct: 558 ESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVS-WNSI 614

Query: 690 LGSCRLHG 697
           + +C  HG
Sbjct: 615 IAACGNHG 622



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 264/546 (48%), Gaps = 48/546 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  +  +LFD + +   VIWN ++ G+         I  +S M+      S +  T+  
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ--ISPNAVTFDC 244

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL  CA    + +G  +H   +    +    + NSLL+MYS C                 
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC----------------- 287

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             ++D   K+F  M R + V WN ++S YV++    E++  F  M+  G+ P  I+F ++
Sbjct: 288 -GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P++S   + +    ++  +++       D+F+ S+ I  Y +      A+ IF  C   
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISL--DIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  V+  MI GY+ N   ++++E+F  ++++ +I  +++T +S L  +  L  L LG++L
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGREL 463

Query: 353 HAYIIKNF------VALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H +IIK        +   VI              +   + +RD+VSWN+MI+   Q+   
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNP 523

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
              + +  +M   G   D V+++A LSA +NL ++  GK  H ++++H +  +   ES L
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VT 510
           IDMYAK G +K A  +F+     +++  +WN++IA    +G L+++   F +M+E + + 
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641

Query: 511 PNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           P+ +T   ++ +C  +G+++ G +     +  Y +         ++D++ ++G +  A  
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 701

Query: 570 VFAKIP 575
               +P
Sbjct: 702 TVKSMP 707



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 237/487 (48%), Gaps = 49/487 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + GR   A +LF  ++R  TV WN +I G+V + L  E++  + +M  S    
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D  T+SS+L + ++  NL   K +HC+ +R   +   F+ ++L++ Y  C     A+ 
Sbjct: 339 --DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ- 395

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             +F      +VV +  ++S Y+    Y++++  FR ++++ I 
Sbjct: 396 -----------------NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I+ V++ P +  L   K    ++G ++K G  + N   +  + I MYA+ G  + A 
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAY 496

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +IF+   +R+   WN+MI    Q+++P  AI++F Q + +  I +D V+  +ALSA + L
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ-MGVSGICYDCVSISAALSACANL 555

Query: 344 QELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMI 383
                G+ +H ++IK+ +A  V                     V   + E+++VSWN++I
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSII 615

Query: 384 SAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HG 441
           +A   +G   + L L +EM +K G   D +T   ++S+  ++ + D G +    +   +G
Sbjct: 616 AACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYG 675

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           I  +  E Y  ++D++ ++G +  A +   K+     D   W  ++     +  +E A V
Sbjct: 676 IQPQ-QEHYACVVDLFGRAGRLTEAYETV-KSMPFPPDAGVWGTLLGACRLHKNVELAEV 733

Query: 500 AFRQMLE 506
           A  ++++
Sbjct: 734 ASSKLMD 740



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 3/229 (1%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           ++ LL A SN      GKQ HA+L+ + I  +   +  ++ MYA  G      ++F + D
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
                   WN++I+ + +NGLL +A   + +ML   V+P+V T   ++ AC  + N + G
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 156

Query: 533 KQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
                 ++  L +D N FV +SLI  Y + G I+  + +F ++ +K+ V +  M+ GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            G  +  +  F  M+   I P+A+TF  VLS C+   L+D G+Q+  L+
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 237/719 (32%), Positives = 390/719 (54%), Gaps = 53/719 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ T+SS+LK+C   R+ R+GK VH   I     P   +YNSL+++YS    S  AE   
Sbjct: 61  DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE--- 117

Query: 166 LKYVEVDYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                           VF+TMRR   R+VV+W+ +++ Y    R ++A++ F   L +G+
Sbjct: 118 ---------------DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE-LGCFDF 281
            P+   +  V  A S+        V  G L+K G  + +D+ V  S I M+ +    F+ 
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCSLIDMFVKGENSFEN 221

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   E N   W  MI   +Q   P EAI  F+ ++ L     D  T  S  SA +
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACA 280

Query: 342 QLQELDLGQQLHAYIIKNFVALPV---------------------IVLNAVIERDVVSWN 380
           +L+ L LG+QLH++ I++ +   V                      V + + +  V+SW 
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 381 TMISAFVQN-GLDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            +I+ +++N  L  E + L  EM  QG +  +  T ++   A  NL +  VGKQ      
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 439 RHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G+     + + +I M+ KS  ++ A++ FE     +++  ++N  + G  +N   E+A
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFES--LSEKNLVSYNTFLDGTCRNLNFEQA 458

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           F    ++ E  +  +  T AS+L     +G+I  G+Q+H   ++  L  N  V  +LI M
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G I+ A+ VF  +  +N +++T+MI G+ +HG + R L  F  M   G++P+ +T+
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           VA+LSACS+ GLV EG + F+ M +++KI+P  EHY C+ D+L R G + +A+EF+  + 
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +VL +W + LG+CR+H ++EL ++ A+K+LE+D     P  ++ LSNIYA  G WE 
Sbjct: 639 FQADVL-VWRTFLGACRVHSNTELGKLAARKILELDPNE--PAAYIQLSNIYACAGKWEE 695

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             ++R++M+ER L KE GCSWI+VG  +++F   D  HP +H+IY+ L+RL  E++  G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 220/480 (45%), Gaps = 51/480 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD ++    V W  +I   +    P EAI  +  M  S      D +T SSV  AC
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG--FESDKFTLSSVFSAC 279

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  NL +GK +H   IR  S     V  SL++MY+ C  S D  +             D
Sbjct: 280 AELENLSLGKQLHSWAIR--SGLVDDVECSLVDMYAKC--SADGSV-------------D 322

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMG-IRPSTISFVNVFPA 235
              KVFD M   +V++W  +++ Y+K      EA+  F  M+  G + P+  +F + F A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             +L D +    V G   K G    ++  VA+S I M+ +    + A++ F++  E+N  
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRG--LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            +NT + G  +N +  +A +L  ++ E  E+     TF S LS V+ +  +  G+Q+H+ 
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           ++K  ++    V NA+I                     R+V+SW +MI+ F ++G     
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LI 452
           L    +M ++G   + VT  A+LSA S++     G +  ++    H I    ME Y  ++
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK-PKMEHYACMV 618

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+  ++GL+  A + F        D   W   +     +   E   +A R++LE  + PN
Sbjct: 619 DLLCRAGLLTDAFE-FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPN 675



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 178/405 (43%), Gaps = 15/405 (3%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
           +DSVT ++LL +    R+  +GK  HA L+   I  +  + + LI +Y+KSG    A  +
Sbjct: 60  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119

Query: 468 FEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           FE     G RD  +W+AM+A Y  NG   +A   F + LE  + PN     +V+ AC+  
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179

Query: 527 GNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKS-GVINYAANVFAKIPEKNSVTYTT 584
             + +G+   GF ++    + +V VG SLIDM+ K       A  VF K+ E N VT+T 
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI    Q G    A+  F  M   G E D  T  +V SAC+    +  G Q+     +  
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299

Query: 645 KIQPSTEHYCCVADMLGRV---GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
            +    +  C + DM  +    G V +  +    + E+ +V+  W +L+       +  L
Sbjct: 300 LVD---DVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMS-WTALITG--YMKNCNL 352

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           A        EM T+  +   H   S+ +   GN  +  +V K++  +  ++ +  +    
Sbjct: 353 ATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLASNSSVA 411

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
              ++ F   D+          + E+  +      + T +N N +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 150/299 (50%), Gaps = 25/299 (8%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSC 105
           +K   +G     R++FD +   + + W  +I G++ N NL  EAI L+S+M  +  +   
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEP 371

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           +++T+SS  KAC    + R+GK V    F R  ++ S  V NS+++M+       DA+  
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS-VANSVISMFVKSDRMEDAQ-- 428

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           + F+++  +N+V++NT +    +   + +A +    +    +  
Sbjct: 429 ----------------RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           S  +F ++   ++++G  +  + ++  +VKLG        V ++ I MY++ G  D A +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP--VCNALISMYSKCGSIDTASR 530

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +F+    RN   W +MI G+ ++   +  +E F Q++E + +  ++VT+++ LSA S +
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEVTYVAILSACSHV 588



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 22/198 (11%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPY 102
           S +S   +  R   A++ F+S++    V +NT + G  C NL +E A  L S++ +    
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG-TCRNLNFEQAFKLLSEITERELG 471

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
            S   +T++S+L   A   ++R G+ +H   ++   + ++ V N+L++MYS C S     
Sbjct: 472 VSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS----- 524

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                         D   +VF+ M  RNV++W ++++ + K    +  +  F  M+  G+
Sbjct: 525 -------------IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571

Query: 223 RPSTISFVNVFPALSSLG 240
           +P+ +++V +  A S +G
Sbjct: 572 KPNEVTYVAILSACSHVG 589


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/723 (33%), Positives = 400/723 (55%), Gaps = 62/723 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  TYS +LK+C   RN ++GK VH   ++        V N+L+++YS C  +  A ++ 
Sbjct: 43  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI- 101

Query: 166 LKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                            F+ M  +R++V+W+ +VS +       +A+  F  ML +G  P
Sbjct: 102 -----------------FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 144

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAE-LGCFDFA 282
           +   F  V  A S+       +++YG +VK G  Y+  D+ V    I M+ +  G    A
Sbjct: 145 NEYCFAAVIRACSNANYAWVGEIIYGFVVKTG--YLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K+FD   ERN   W  MI  + Q     +AI+LF+  +EL   V D  T+ S LSA ++
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLD-MELSGYVPDRFTYSSVLSACTE 261

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI-----------------------ERDVVSW 379
           L  L LG+QLH+ +I+  +AL V V  +++                       E +V+SW
Sbjct: 262 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 321

Query: 380 NTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
             +I+A+VQ+G  D E + L  +M       +  + +++L A  NL +   G+Q ++Y +
Sbjct: 322 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 381

Query: 439 RHGI-HFEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + GI     + + LI MYA+SG ++ AR+    +FEKN        ++NA++ GY +N  
Sbjct: 382 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN------LVSYNAIVDGYAKNLK 435

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEAF+ F ++ +  +  +  T AS+L     +G +  G+Q+HG  ++     N  +  +
Sbjct: 436 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 495

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MYS+ G I  A  VF ++ ++N +++T+MI G+ +HG + RAL +F  M   G +P+
Sbjct: 496 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 555

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            IT+VAVLSACS+ G++ EG + F+ M +E+ I P  EHY C+ D+LGR G +VEA EF+
Sbjct: 556 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 615

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +    + L +W +LLG+CR+HG++EL    A+ +LE +  +  P  ++LLSN++A  G
Sbjct: 616 NSMPLMADAL-VWRTLLGACRVHGNTELGRHAAEMILEQEPDD--PAAYILLSNLHASAG 672

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W++V K+RK M+ER L KE GCSWI+V   V+RF   +  HPQ+ +IY+ L++LA +++
Sbjct: 673 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 732

Query: 794 NAG 796
             G
Sbjct: 733 EMG 735



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 219/474 (46%), Gaps = 46/474 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V W  +I  F       +AI L+  M+ S      D +TYSSVL AC
Sbjct: 202 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--DRFTYSSVLSAC 259

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E   L +GK +H   IR        V  SL++MY+ C +             VD S+  
Sbjct: 260 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD----------GSVDDSR-- 307

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              KVF+ M   NV++W  I++ YV++ E   EA+  F  M+   IRP+  SF +V  A 
Sbjct: 308 ---KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 364

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +L D  + + VY   VKLG   VN   V +S I MYA  G  + ARK FD   E+N   
Sbjct: 365 GNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKAFDILFEKNLVS 422

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +N ++ GY +N    EA  LF ++ +   I     TF S LS  + +  +  G+Q+H  +
Sbjct: 423 YNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRL 481

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K        + NA+I                    +R+V+SW +MI+ F ++G     L
Sbjct: 482 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 541

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LID 453
            + ++M + G   + +T  A+LSA S++     G K  ++    HGI    ME Y  ++D
Sbjct: 542 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI-VPRMEHYACMVD 600

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +  +SGL+  A + F  +     D   W  ++     +G  E    A   +LE 
Sbjct: 601 LLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ 653



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 4/238 (1%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGL 460
           M +Q    D  T + LL +    RN  +GK  H  L++ G+  + +  + LI +Y+K G 
Sbjct: 35  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 94

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
            +TAR IFE      RD  +W+AM++ +  N +  +A   F  MLE    PN    A+V+
Sbjct: 95  TETARLIFE-GMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 153

Query: 521 PACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSK-SGVINYAANVFAKIPEKN 578
            AC+      +G+ ++GF ++   L+ +V VG  LIDM+ K SG +  A  VF K+PE+N
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            VT+T MI  + Q G +  A+ LF  M+  G  PD  T+ +VLSAC+  GL+  G Q+
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 194/430 (45%), Gaps = 41/430 (9%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    +R++F+ +     + W  II  +V       EAI L+ +M   S +   
Sbjct: 295 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM--ISGHIRP 352

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++++SSVLKAC    +   G+ V+ + ++        V NSL++MY+      DA    
Sbjct: 353 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR--- 409

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N+V++N IV  Y K  +  EA   F  +   GI  S
Sbjct: 410 ---------------KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++G L+K G  Y ++  + ++ I MY+  G  + A ++
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQV 512

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   +RN   W +MI G+ ++     A+E+F ++LE      +++T+++ LSA S +  
Sbjct: 513 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP-NEITYVAVLSACSHVGM 571

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +  GQ+    + K    +P           +  +  M+    ++GL  E +  +  M   
Sbjct: 572 ISEGQKHFNSMYKEHGIVP----------RMEHYACMVDLLGRSGLLVEAMEFINSMP-- 619

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG----LI 461
             M D++    LL A     N ++G+     +L            L +++A +G    ++
Sbjct: 620 -LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 678

Query: 462 KTARQIFEKN 471
           K  + + E+N
Sbjct: 679 KIRKSMKERN 688



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     V +N I+ G+  N    EA LL++++  +    
Sbjct: 394 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 453

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   ++     ++ + N+L++MYS C  +++A  
Sbjct: 454 SA--FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC-GNIEAAF 510

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF+ M  RNV++W ++++ + K      A+  F  ML  G +
Sbjct: 511 -----------------QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 553

Query: 224 PSTISFVNVFPALSSLG 240
           P+ I++V V  A S +G
Sbjct: 554 PNEITYVAVLSACSHVG 570



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G L  AF     M + N  P++ T + +L +C    N +LGK +H   ++  L+ +  V 
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            +LI +YSK G    A  +F  +  K   V+++ M+  +  + M  +A+  F  M   G 
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR-VGKVVEA 669
            P+   F AV+ ACS A     G  I+  + +   ++      C + DM  +  G +  A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 670 YEFVKELGE 678
           Y+   ++ E
Sbjct: 203 YKVFDKMPE 211


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 252/817 (30%), Positives = 431/817 (52%), Gaps = 60/817 (7%)

Query: 4   SSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLF 62
           SS+   L     T      QL ++HSL   +    +    ++L +K      P  +  +F
Sbjct: 76  SSISRALASAATTT-----QLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVF 130

Query: 63  DSITRPTTVI--WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
             +  P+  +  WN+II     N L  EA+ LYS+ ++       D YT+ SV+ ACA  
Sbjct: 131 -RLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQP--DTYTFPSVINACAGL 187

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            +  + K++H   +        ++ N+L++MY              ++ ++D ++     
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYC-------------RFNDLDKAR----- 229

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVF+ M  R+VV+WN+++S Y     + EA+  +     +G+ P + +  +V  A   LG
Sbjct: 230 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLG 289

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +  D+++GL+ K+G +   D+ V +  + MY +       R+IFD  + R+   WNTM
Sbjct: 290 SVEEGDIIHGLIEKIGIK--KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY Q     E+I+LF++++  ++   D +T  S L A   L +L+ G+ +H Y+I + 
Sbjct: 348 ICGYSQVGLYEESIKLFMEMV--NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 405

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
                   N +I                     +D VSWN+MI+ ++QNG  DE + L +
Sbjct: 406 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKL-F 464

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSG 459
           +M K     DSVT   LLS ++ L +  +GK+ H  L + G +   + S  L+DMYAK G
Sbjct: 465 KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCG 524

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  + ++FE   +  RD  TWN +IA    +           +M    VTP++ T+ S+
Sbjct: 525 EMGDSLKVFENMKA--RDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSI 582

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           LP C+ +     GK++HG   +  L+ +V VG  LI+MYSK G +  +  VF  +  K+ 
Sbjct: 583 LPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDV 642

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           VT+T +I   G +G  ++A+  F  M+  GI PD + FVA++ ACS++GLV+EGL  F  
Sbjct: 643 VTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHR 702

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+++YKI+P  EHY CV D+L R   + +A +F+  +  + +   IWG+LL +CR+ G +
Sbjct: 703 MKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS-SIWGALLSACRMSGDT 761

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           E+A+ V+++++E++  ++  GY+VL+SN+YA  G W+ V  +RK ++ RGL+K+ GCSW+
Sbjct: 762 EIAQRVSERIIELNPDDT--GYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 819

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++   V  F +  +   Q  ++ ++L  LA  M   G
Sbjct: 820 EIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEG 856


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/723 (33%), Positives = 400/723 (55%), Gaps = 62/723 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  TYS +LK+C   RN ++GK VH   ++        V N+L+++YS C  +  A ++ 
Sbjct: 25  DLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI- 83

Query: 166 LKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                            F+ M  +R++V+W+ +VS +       +A+  F  ML +G  P
Sbjct: 84  -----------------FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYP 126

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAE-LGCFDFA 282
           +   F  V  A S+       +++YG +VK G  Y+  D+ V    I M+ +  G    A
Sbjct: 127 NEYCFAAVIRACSNANYAWVGEIIYGFVVKTG--YLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K+FD   ERN   W  MI  + Q     +AI+LF+  +EL   V D  T+ S LSA ++
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLD-MELSGYVPDRFTYSSVLSACTE 243

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI-----------------------ERDVVSW 379
           L  L LG+QLH+ +I+  +AL V V  +++                       E +V+SW
Sbjct: 244 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 303

Query: 380 NTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
             +I+A+VQ+G  D E + L  +M       +  + +++L A  NL +   G+Q ++Y +
Sbjct: 304 TAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 363

Query: 439 RHGI-HFEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + GI     + + LI MYA+SG ++ AR+    +FEKN        ++NA++ GY +N  
Sbjct: 364 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN------LVSYNAIVDGYAKNLK 417

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEAF+ F ++ +  +  +  T AS+L     +G +  G+Q+HG  ++     N  +  +
Sbjct: 418 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 477

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MYS+ G I  A  VF ++ ++N +++T+MI G+ +HG + RAL +F  M   G +P+
Sbjct: 478 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 537

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            IT+VAVLSACS+ G++ EG + F+ M +E+ I P  EHY C+ D+LGR G +VEA EF+
Sbjct: 538 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 597

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +    + L +W +LLG+CR+HG++EL    A+ +LE +  +  P  ++LLSN++A  G
Sbjct: 598 NSMPLMADAL-VWRTLLGACRVHGNTELGRHAAEMILEQEPDD--PAAYILLSNLHASAG 654

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W++V K+RK M+ER L KE GCSWI+V   V+RF   +  HPQ+ +IY+ L++LA +++
Sbjct: 655 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 714

Query: 794 NAG 796
             G
Sbjct: 715 EMG 717



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 219/474 (46%), Gaps = 46/474 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V W  +I  F       +AI L+  M+ S      D +TYSSVL AC
Sbjct: 184 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--DRFTYSSVLSAC 241

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E   L +GK +H   IR        V  SL++MY+ C +             VD S+  
Sbjct: 242 TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD----------GSVDDSR-- 289

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              KVF+ M   NV++W  I++ YV++ E   EA+  F  M+   IRP+  SF +V  A 
Sbjct: 290 ---KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 346

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +L D  + + VY   VKLG   VN   V +S I MYA  G  + ARK FD   E+N   
Sbjct: 347 GNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKAFDILFEKNLVS 404

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +N ++ GY +N    EA  LF ++ +   I     TF S LS  + +  +  G+Q+H  +
Sbjct: 405 YNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRL 463

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K        + NA+I                    +R+V+SW +MI+ F ++G     L
Sbjct: 464 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 523

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LID 453
            + ++M + G   + +T  A+LSA S++     G K  ++    HGI    ME Y  ++D
Sbjct: 524 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI-VPRMEHYACMVD 582

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +  +SGL+  A + F  +     D   W  ++     +G  E    A   +LE 
Sbjct: 583 LLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ 635



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 131/238 (55%), Gaps = 4/238 (1%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGL 460
           M +Q    D  T + LL +    RN  +GK  H  L++ G+  + +  + LI +Y+K G 
Sbjct: 17  MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGD 76

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
            +TAR IFE      RD  +W+AM++ +  N +  +A   F  MLE    PN    A+V+
Sbjct: 77  TETARLIFE-GMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 135

Query: 521 PACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSK-SGVINYAANVFAKIPEKN 578
            AC+      +G+ ++GF ++   L+ +V VG  LIDM+ K SG +  A  VF K+PE+N
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            VT+T MI  + Q G +  A+ LF  M+  G  PD  T+ +VLSAC+  GL+  G Q+
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 194/430 (45%), Gaps = 41/430 (9%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    +R++F+ +     + W  II  +V       EAI L+ +M   S +   
Sbjct: 277 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM--ISGHIRP 334

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++++SSVLKAC    +   G+ V+ + ++        V NSL++MY+      DA    
Sbjct: 335 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR--- 391

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N+V++N IV  Y K  +  EA   F  +   GI  S
Sbjct: 392 ---------------KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++G L+K G  Y ++  + ++ I MY+  G  + A ++
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQV 494

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   +RN   W +MI G+ ++     A+E+F ++LE      +++T+++ LSA S +  
Sbjct: 495 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP-NEITYVAVLSACSHVGM 553

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +  GQ+    + K    +P           +  +  M+    ++GL  E +  +  M   
Sbjct: 554 ISEGQKHFNSMYKEHGIVP----------RMEHYACMVDLLGRSGLLVEAMEFINSMP-- 601

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG----LI 461
             M D++    LL A     N ++G+     +L            L +++A +G    ++
Sbjct: 602 -LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 660

Query: 462 KTARQIFEKN 471
           K  + + E+N
Sbjct: 661 KIRKSMKERN 670



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     V +N I+ G+  N    EA LL++++  +    
Sbjct: 376 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 435

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   ++     ++ + N+L++MYS C  +++A  
Sbjct: 436 SA--FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC-GNIEAAF 492

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF+ M  RNV++W ++++ + K      A+  F  ML  G +
Sbjct: 493 -----------------QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 535

Query: 224 PSTISFVNVFPALSSLG 240
           P+ I++V V  A S +G
Sbjct: 536 PNEITYVAVLSACSHVG 552



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 2/189 (1%)

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G L  AF     M + N  P++ T + +L +C    N +LGK +H   ++  L+ +  V 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            +LI +YSK G    A  +F  +  K   V+++ M+  +  + M  +A+  F  M   G 
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR-VGKVVEA 669
            P+   F AV+ ACS A     G  I+  + +   ++      C + DM  +  G +  A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 670 YEFVKELGE 678
           Y+   ++ E
Sbjct: 185 YKVFDKMPE 193


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/713 (33%), Positives = 389/713 (54%), Gaps = 47/713 (6%)

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           C+ + + SVLKAC  T++L +GK VH   +    +   FV NSL+ +Y+ C    DA   
Sbjct: 8   CNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR-- 65

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                            +FD +  R+VV+WN + S YV ++ + EAV  F  M+  GIRP
Sbjct: 66  ----------------SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRP 109

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  S  ++    + L D      ++G L+KLG  Y +D F A++ + MYA++G  + A  
Sbjct: 110 NEFSLSSMINVCTGLEDSVQGRKIHGYLIKLG--YDSDAFSANALVDMYAKVGILEDASS 167

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD   + +   WN +I G V + +   A+EL  + +    +  +  T  SAL A + + 
Sbjct: 168 VFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLRE-MNKSGMCPNMFTLSSALKACAGMA 226

Query: 345 ELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMIS 384
             +LG+QLH+ +IK      +F+ + +I              V   + ERD+++WN +IS
Sbjct: 227 LRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVIS 286

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              QN  D+E   L   M  +G   +  T++ +L + + L+   + +Q HA  L+ G  F
Sbjct: 287 GHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF 346

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + + LID Y K G ++ A ++FE  +S   D   + +++  Y Q+G  EEA   + +
Sbjct: 347 DNYVVNSLIDTYGKCGHVEDATRVFE--ESPIVDLVLFTSLVTAYAQDGQGEEALRLYLE 404

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M +  + P+    +S+L AC  +   E GKQ+H   +++    ++F G SL++MY+K G 
Sbjct: 405 MQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGS 464

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I  A+  F++IP +  V+++ MI G  QHG  + AL LF+ M   G+ P+ IT V+VL A
Sbjct: 465 IEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCA 524

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           C++AGLV E    F+ M+  + I+P  EHY C+ D+LGR GK+  A E V ++  + N L
Sbjct: 525 CNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANAL 584

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +WG+LLG+ R+H + +L E  A+ LL ++   S  G HVLL+NIYA  G W+ V +VR+
Sbjct: 585 -VWGALLGAARIHKNIDLGEQAAEMLLALEPEKS--GTHVLLANIYASVGMWDKVARVRR 641

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M++  ++KE G SW++V   V  F   D+ H +S +IY  L+ L+  ++ AG
Sbjct: 642 LMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAG 694



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 269/554 (48%), Gaps = 52/554 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD+I   + V WN +   +V +++  EA+ L+  M  S      + ++ SS++  C
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRP--NEFSLSSMINVC 121

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +   G+ +H + I+   +   F  N+L++MY+      DA                
Sbjct: 122 TGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDAS--------------- 166

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VFD + + ++V+WN I++  V  E +  A+   R M + G+ P+  +  +   A +
Sbjct: 167 ---SVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA 223

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   +    ++  L+K+  +  +D F+    I MY++    D AR +F    ER+   W
Sbjct: 224 GMALRELGRQLHSSLIKM--DMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAW 281

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I G+ QN    EA  LF  ++  + I F+  T  + L +++ LQ   + +Q+HA  +
Sbjct: 282 NAVISGHSQNEEDEEAASLF-PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSL 340

Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
           K+       V+N++I+                     D+V + ++++A+ Q+G  +E L 
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALR 400

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
           L  EMQ +G   DS   ++LL+A ++L   + GKQ H ++L+ G     F G  + L++M
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAG--NSLVNM 458

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G I+ A   F +     R   +W+AMI G  Q+G  +EA   F+QML+  V PN +
Sbjct: 459 YAKCGSIEDASCAFSRIPV--RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHI 516

Query: 515 TIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T+ SVL ACN  G +   K   +   I + ++        +ID+  ++G +  A  +  K
Sbjct: 517 TLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNK 576

Query: 574 IP-EKNSVTYTTMI 586
           +P + N++ +  ++
Sbjct: 577 MPFQANALVWGALL 590


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/712 (32%), Positives = 387/712 (54%), Gaps = 47/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+Y Y  +L++C + ++L +GK VH H +RC   P+ ++ N+LL +Y+ C S  +A    
Sbjct: 27  DSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEAR--- 83

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          ++FD    ++VV+WN ++S Y       EA   F +M +  + P 
Sbjct: 84  ---------------QLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +FV++  A SS         ++  +++ G    ND  V ++ I MYA+ G    AR++
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAG--LANDTTVGNALISMYAKCGSVRDARRV 186

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    R+   W T+ G Y ++ +  E+++ +  +L+ + +    +T+++ LSA   L  
Sbjct: 187 FDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQ-ERVRPSRITYMNVLSACGSLAA 245

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L+ G+Q+HA+I+++     V V  A+ +                    RDV++WNTMI  
Sbjct: 246 LEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRG 305

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           FV +G  +E     + M ++G   D  T T +LSA +       GK+ HA   + G+  +
Sbjct: 306 FVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSD 365

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               + LI+MY+K+G +K ARQ+F++     RD  +W  ++  Y     + E+F  F+QM
Sbjct: 366 VRFGNALINMYSKAGSMKDARQVFDRMPK--RDVVSWTTLLGRYADCDQVVESFTTFKQM 423

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L+  V  N +T   VL AC+    ++ GK++H   ++  L  ++ V  +L+ MY K G +
Sbjct: 424 LQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSV 483

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  VF  +  ++ VT+ T+I G GQ+G    AL  +  MK  G+ P+A TFV VLSAC
Sbjct: 484 EDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSAC 543

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
               LV+EG + F  M ++Y I P+ +HY C+ D+L R G + EA + +  +  + +   
Sbjct: 544 RVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSA-A 602

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +WG+LL +CR+H + E+ E  A+  L+++ +N+  G +V LS IYA  G W +V K+RK 
Sbjct: 603 MWGALLAACRIHCNVEIGERAAEHCLKLEPQNA--GLYVSLSAIYAAAGMWRDVAKLRKF 660

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M+ERG++KE G SWI++ G V+ F ++DQ HP++ +IY  LE L  +M++ G
Sbjct: 661 MKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLG 712



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 264/558 (47%), Gaps = 47/558 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + ARQLFD  +  + V WN +I G+    L  EA  L++ M++       D +T+ S
Sbjct: 77  GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQER--LEPDKFTFVS 134

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC+    L  G+ +H   +         V N+L++MY+ C S  DA           
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDAR---------- 184

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VFD M  R+ V+W T+   Y ++    E+++ +  ML+  +RPS I+++NV
Sbjct: 185 --------RVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNV 236

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A  SL   +    ++  +V+  SEY +D+ V+++   MY + G F  AR++F+    R
Sbjct: 237 LSACGSLAALEKGKQIHAHIVE--SEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYR 294

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNTMI G+V +    EA   F ++LE + +  D  T+ + LSA ++   L  G+++
Sbjct: 295 DVIAWNTMIRGFVDSGQLEEAHGTFHRMLE-EGVAPDRATYTTVLSACARPGGLARGKEI 353

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA   K+ +   V   NA+I                    +RDVVSW T++  +      
Sbjct: 354 HARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQV 413

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E      +M +QG   + +T   +L A SN      GK+ HA +++ G+  +  + + L
Sbjct: 414 VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNAL 473

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + MY K G ++ A ++FE      RD  TWN +I G  QNG   EA   +  M    + P
Sbjct: 474 MSMYFKCGSVEDAIRVFEGMSM--RDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRP 531

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N  T  +VL AC     +E G++   F S  Y +         ++D+ +++G +  A +V
Sbjct: 532 NAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDV 591

Query: 571 FAKIPEKNSVTYTTMILG 588
              IP K S      +L 
Sbjct: 592 ILTIPLKPSAAMWGALLA 609



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 131/245 (53%), Gaps = 4/245 (1%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           + ++G  +DS     LL +    ++  VGKQ H ++LR G+     + + L+ +YA  G 
Sbjct: 19  LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  ARQ+F+K    ++   +WN MI+GY   GL +EAF  F  M +  + P+  T  S+L
Sbjct: 79  VNEARQLFDK--FSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSIL 136

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+    +  G+++H   +   L  +  VG +LI MY+K G +  A  VF  +  ++ V
Sbjct: 137 SACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEV 196

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DL 639
           ++TT+   Y + G  E +L  + +M    + P  IT++ VLSAC     +++G QI   +
Sbjct: 197 SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHI 256

Query: 640 MQQEY 644
           ++ EY
Sbjct: 257 VESEY 261


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 248/820 (30%), Positives = 410/820 (50%), Gaps = 52/820 (6%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKIC-QEGRPHLARQLFDSIT 66
           L LP P P +    P L    +  PP PK        R+S +   +G   +  Q    I 
Sbjct: 63  LSLPIPKPCSARTTPFLRTWRT--PPWPK----PCGGRISPLGFSDGLDEIPCQFVCLIK 116

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           + +  +     I  +C    Y   L        +     ++ TY +++ AC   R+L+ G
Sbjct: 117 QHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYG 176

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           K +H H ++    P   + N +LNMY  C S  DA                   K FDTM
Sbjct: 177 KKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR------------------KAFDTM 218

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           + RNVV+W  ++S Y +  +  +A+  +  ML+ G  P  ++F ++  A    GD     
Sbjct: 219 QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGR 278

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++G ++K G  Y + L   ++ I MY   G    A  +F     ++   W +MI G+ Q
Sbjct: 279 QLHGHVIKSG--YDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQ 336

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-------- 358
             + +EA+ LF  +        ++  F S  SA   L E + G+Q+H    K        
Sbjct: 337 LGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVF 396

Query: 359 ------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                        F+   +     +   D+VSWN +I+AF  +G  +E +    +M   G
Sbjct: 397 AGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTG 456

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTAR 465
            M D +T  +LL A  +    + G Q H+Y+++ G+  E  + + L+ MY K   +  A 
Sbjct: 457 LMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAF 516

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F K+ S + +  +WNA+++   Q+    E F  F+ ML     P+ +TI ++L  C  
Sbjct: 517 NVF-KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAE 575

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           + ++E+G Q+H FS++  L  +V V   LIDMY+K G + +A +VF      + V+++++
Sbjct: 576 LASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSL 635

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I+GY Q G+   AL+LFR MK  G++P+ +T++ VLSACS+ GLV+EG   ++ M+ E  
Sbjct: 636 IVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELG 695

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I P+ EH  C+ D+L R G + EA  F+K++G   ++  +W +LL SC+ HG+ ++AE  
Sbjct: 696 IPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDI-TMWKTLLASCKTHGNVDIAERA 754

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ +L++D  NS     VLLSNI+A  GNW+ V ++R  M++ G++K  G SWI V   +
Sbjct: 755 AENILKLDPSNS--AALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQI 812

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           + F S+D  H Q   IY MLE L ++M + G    Q  ++
Sbjct: 813 HVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQRLDI 852


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 254/762 (33%), Positives = 394/762 (51%), Gaps = 52/762 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +FD +     + W  +I G        EA   + QM++       ++YTY S+L A 
Sbjct: 84  AQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIP--NSYTYVSILNAN 141

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L   K VH H +         V N+L++MY+   S  DA +V             
Sbjct: 142 ASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV------------- 188

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF--PA 235
                FD M  R++ +W  ++    +  R  EA   F  M R G  P+  +++++    A
Sbjct: 189 -----FDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           ++S G  +    V+    K G  +++DL V ++ I MYA+ G  D AR +FD   +R+  
Sbjct: 244 ITSTGALEWVKEVHKHAGKAG--FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVI 301

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA---------------- 339
            WN MIGG  QN    EA  +F++ ++ +  V D  T+LS L+                 
Sbjct: 302 SWNAMIGGLAQNGCGHEAFTIFLK-MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 340 ---VSQLQELDLGQQ-LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
              V  + +L +G   +H YI    +    ++ + +  R+V +WN MI    Q     E 
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L  +M+++GF  D+ T   +LSA       +  K+ H+Y +  G+    + + L+ MY
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMY 480

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G    A+Q+F+  D  +R+  TW  MI+G  Q+G   EAF  F QML   + P+  T
Sbjct: 481 AKCGNTMYAKQVFD--DMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             S+L AC   G +E  K++H  ++   L  ++ VG +L+ MY+K G ++ A  VF  + 
Sbjct: 539 YVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML 598

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E++  ++T MI G  QHG    AL LF  MK  G +P+  +FVAVLSACS+AGLVDEG +
Sbjct: 599 ERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRR 658

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCR 694
            F  + Q+Y I+P+ EHY C+ D+LGR G++ EA  F+  +  E G+    WG+LLG+C 
Sbjct: 659 QFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDA--PWGALLGACV 716

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            +G+ E+AE  AK+ L++  +++    +VLLSNIYA  GNWE    VR  M+ RG+RKE 
Sbjct: 717 TYGNLEMAEFAAKERLKLKPKSAST--YVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEP 774

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           G SWI+V   ++ F   D  HP+S +IY  L+ L   ++  G
Sbjct: 775 GRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEG 816



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 184/579 (31%), Positives = 282/579 (48%), Gaps = 49/579 (8%)

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +I G+       +A+ +YSQM++       +  TY S+LKAC    +L+ GK +H H I+
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQP--NEITYLSILKACCSPVSLKWGKKIHAHIIQ 58

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
                   V  +L+NMY  C S  DA++                  +FD M  RNV++W 
Sbjct: 59  SGFQSDVRVETALVNMYVKCGSIDDAQL------------------IFDKMVERNVISWT 100

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
            ++       R  EA  +F  M R G  P++ ++V++  A +S G  +    V+   V  
Sbjct: 101 VMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA 160

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G     DL V ++ + MYA+ G  D AR +FD  +ER+   W  MIGG  Q+    EA  
Sbjct: 161 G--LALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFS 218

Query: 316 LFVQVLELDEIVFDDVTFLSAL--SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI- 372
           LF+Q +E    + +  T+LS L  SA++    L+  +++H +  K      + V NA+I 
Sbjct: 219 LFLQ-MERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIH 277

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                              +RDV+SWN MI    QNG   E   +  +MQ++GF+ DS T
Sbjct: 278 MYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTT 337

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKND 472
             +LL+   +    +  K+ H + +  G+  +  + S  + MY + G I  A+ IF+K  
Sbjct: 338 YLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDK-- 395

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              R+  TWNAMI G  Q     EA   F QM      P+  T  ++L A      +E  
Sbjct: 396 LAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWV 455

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K++H ++I   L  ++ VG +L+ MY+K G   YA  VF  + E+N  T+T MI G  QH
Sbjct: 456 KEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           G    A SLF  M   GI PDA T+V++LSAC+  G ++
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALE 553



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 81/188 (43%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+Q+FD +       W  +I G   +   +EA  L+ QM +       D  TY S
Sbjct: 484 GNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP--DATTYVS 541

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L ACA T  L   K VH H +         V N+L++MY+ C S  DA           
Sbjct: 542 ILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDAR---------- 591

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VFD M  R+V +W  ++    +  R ++A+  F  M   G +P+  SFV V
Sbjct: 592 --------RVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAV 643

Query: 233 FPALSSLG 240
             A S  G
Sbjct: 644 LSACSHAG 651


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 249/775 (32%), Positives = 396/775 (51%), Gaps = 55/775 (7%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD I  P  V W++++  +  N LP  AI  +  M+       C+ +    V
Sbjct: 52  RPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEG--VCCNEFALPVV 109

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK   + +   +G  VH   +        FV N+L+ MY            G  ++    
Sbjct: 110 LKCVPDAQ---LGAQVHAMAMATGFGSDVFVANALVAMYG-----------GFGFM---- 151

Query: 174 SKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              D   +VFD     RN V+WN ++S YVK ++  +A++ F  M+  GI+P+   F  V
Sbjct: 152 ---DDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCV 208

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +   +  +   V+ ++V++G  Y  D+F A++ + MY ++G  D A  IF+   + 
Sbjct: 209 VNACTGSRNIDAGRQVHAMVVRMG--YEKDVFTANALVDMYVKMGRVDIASVIFEKMPDS 266

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I G V N H   AIEL +Q ++   +V +     S L A +     DLG+Q+
Sbjct: 267 DVVSWNALISGCVLNGHDHRAIELLLQ-MKSSGLVPNVFMLSSILKACAGAGAFDLGRQI 325

Query: 353 HAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           H ++IK                    +F+   + V + +  RD++ WN +IS     G  
Sbjct: 326 HGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRH 385

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           DE   + Y ++K+G  ++  T+ A+L + ++L      +Q HA   + G  F+  + + L
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ID Y K   +  A ++FE+  SGD    T  +MI   +Q    E A   F +ML   + P
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVT--SMITALSQCDHGEGAIKLFMEMLRKGLEP 503

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +   ++S+L AC  +   E GKQ+H   I+     + F G +L+  Y+K G I  A   F
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           + +PE+  V+++ MI G  QHG  +RAL LF  M   GI P+ IT  +VL AC++AGLVD
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           E  + F+ M++ + I  + EHY C+ D+LGR GK+ +A E V  +  + N   +WG+LLG
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA-SVWGALLG 682

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           + R+H   EL ++ A+KL  ++   S  G HVLL+N YA  G W  V KVRK M++  ++
Sbjct: 683 ASRVHKDPELGKLAAEKLFILEPEKS--GTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 740

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           KE   SW++V   V+ F   D+ HP + +IY  L+ L   M  AG   I N +VD
Sbjct: 741 KEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG--YIPNVDVD 793



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 200/461 (43%), Gaps = 56/461 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +A  +F+ +     V WN +I G V N   + AI L  QMK S    +   +  SS
Sbjct: 251 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNV--FMLSS 308

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKACA      +G+ +H   I+  ++   ++   L++MY+     LD  M         
Sbjct: 309 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN-HFLDDAM--------- 358

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVFD M  R+++ WN ++S      R+ EA   F  + + G+  +  +   V
Sbjct: 359 --------KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 410

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +SL    +   V+ L  K+G  ++ D  V +  I  Y +  C   A ++F+ C   
Sbjct: 411 LKSTASLEAASATRQVHALAEKIG--FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSG 468

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +     +MI    Q +H   AI+LF+++L    +  D     S L+A + L   + G+Q+
Sbjct: 469 DIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA++IK          NA++                    ER VVSW+ MI    Q+G  
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-HFEGMESY 450
              L L   M  +G   + +T+T++L A ++    D  K+    +    GI   E   S 
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647

Query: 451 LIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIA 486
           +ID+  ++G +  A ++     F+ N S       W A++ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANAS------VWGALLG 682


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 237/719 (32%), Positives = 390/719 (54%), Gaps = 53/719 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ T+SS+LK+C   R+ R+GK VH   I     P   +YNSL+++YS    S  AE   
Sbjct: 61  DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE--- 117

Query: 166 LKYVEVDYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                           VF+TMRR   R+VV+W+ +++ Y    R ++A++ F   L +G+
Sbjct: 118 ---------------DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE-LGCFDF 281
            P+   +  V  A S+        V  G L+K G  + +D+ V  S I M+ +    F+ 
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCSLIDMFVKGENSFEN 221

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   E N   W  MI   +Q   P EAI  F+ ++ L     D  T  S  SA +
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACA 280

Query: 342 QLQELDLGQQLHAYIIKNFVALPV---------------------IVLNAVIERDVVSWN 380
           +L+ L LG+QLH++ I++ +   V                      V + + +  V+SW 
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 381 TMISAFVQN-GLDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            +I+ +++N  L  E + L  EM  QG +  +  T ++   A  NL +  VGKQ      
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 439 RHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G+     + + +I M+ KS  ++ A++ FE     +++  ++N  + G  +N   E+A
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFES--LSEKNLVSYNTFLDGTCRNLNFEQA 458

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           F    ++ E  +  +  T AS+L     +G+I  G+Q+H   ++  L  N  V  +LI M
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G I+ A+ VF  +  +N +++T+MI G+ +HG + R L  F  M   G++P+ +T+
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           VA+LSACS+ GLV EG + F+ M +++KI+P  EHY C+ D+L R G + +A+EF+  + 
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +VL +W + LG+CR+H ++EL ++ A+K+LE+D     P  ++ LSNIYA  G WE 
Sbjct: 639 FQADVL-VWRTFLGACRVHSNTELGKLAARKILELDPNE--PAAYIQLSNIYACAGKWEE 695

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             ++R++M+ER L KE GCSWI+VG  +++F   D  HP +H+IY+ L+RL  E++  G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 51/480 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD ++    V W  +I   +    P EAI  +  M  S   +  D +T SSV  AC
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES--DKFTLSSVFSAC 279

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  NL +GK +H   IR  S     V  SL++MY+ C  S D  +             D
Sbjct: 280 AELENLSLGKQLHSWAIR--SGLVDDVECSLVDMYAKC--SADGSV-------------D 322

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMG-IRPSTISFVNVFPA 235
              KVFD M   +V++W  +++ Y+K      EA+  F  M+  G + P+  +F + F A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             +L D +    V G   K G    ++  VA+S I M+ +    + A++ F++  E+N  
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRG--LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            +NT + G  +N +  +A +L  ++ E  E+     TF S LS V+ +  +  G+Q+H+ 
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           ++K  ++    V NA+I                     R+V+SW +MI+ F ++G     
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LI 452
           L    +M ++G   + VT  A+LSA S++     G +  ++    H I    ME Y  ++
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK-PKMEHYACMV 618

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+  ++GL+  A + F        D   W   +     +   E   +A R++LE  + PN
Sbjct: 619 DLLCRAGLLTDAFE-FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPN 675



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 112/221 (50%), Gaps = 4/221 (1%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
           +DSVT ++LL +    R+  +GK  HA L+   I  +  + + LI +Y+KSG    A  +
Sbjct: 60  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119

Query: 468 FEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           FE     G RD  +W+AM+A Y  NG   +A   F + LE  + PN     +V+ AC+  
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179

Query: 527 GNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKS-GVINYAANVFAKIPEKNSVTYTT 584
             + +G+   GF ++    + +V VG SLIDM+ K       A  VF K+ E N VT+T 
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           MI    Q G    A+  F  M   G E D  T  +V SAC+
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 150/299 (50%), Gaps = 25/299 (8%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSC 105
           +K   +G     R++FD +   + + W  +I G++ N NL  EAI L+S+M  +  +   
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEP 371

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           +++T+SS  KAC    + R+GK V    F R  ++ S  V NS+++M+       DA+  
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS-VANSVISMFVKSDRMEDAQ-- 428

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           + F+++  +N+V++NT +    +   + +A +    +    +  
Sbjct: 429 ----------------RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           S  +F ++   ++++G  +  + ++  +VKLG        V ++ I MY++ G  D A +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP--VCNALISMYSKCGSIDTASR 530

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +F+    RN   W +MI G+ ++   +  +E F Q++E + +  ++VT+++ LSA S +
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEVTYVAILSACSHV 588



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 22/198 (11%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPY 102
           S +S   +  R   A++ F+S++    V +NT + G  C NL +E A  L S++ +    
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG-TCRNLNFEQAFKLLSEITERELG 471

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
            S   +T++S+L   A   ++R G+ +H   ++   + ++ V N+L++MYS C S     
Sbjct: 472 VSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS----- 524

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                         D   +VF+ M  RNV++W ++++ + K    +  +  F  M+  G+
Sbjct: 525 -------------IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571

Query: 223 RPSTISFVNVFPALSSLG 240
           +P+ +++V +  A S +G
Sbjct: 572 KPNEVTYVAILSACSHVG 589


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/801 (30%), Positives = 418/801 (52%), Gaps = 59/801 (7%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPTTV-IWNTIII 78
           PQL  +HSL      L    I S   +SK  Q   P  +  +F SI+    V +WN+II 
Sbjct: 36  PQLRTVHSL-IITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIR 94

Query: 79  GFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
               N L  +A+  Y++M  KK  P    D +T+ SV+ +CA   +L +G  VH H +  
Sbjct: 95  ALTHNGLFTQALGYYTEMREKKLQP----DAFTFPSVINSCARILDLELGCIVHEHAMEM 150

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
                 ++ N+L++MYS             ++V++D ++Y     VF+ M  R+ V+WN+
Sbjct: 151 GFESDLYIGNALIDMYS-------------RFVDLDNARY-----VFEEMSNRDSVSWNS 192

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
           ++S Y     + +A+  +      G+ P   +  +V  A  SL   K    V+G++ K+G
Sbjct: 193 LISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIG 252

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
                D+ + +  + MY +      AR++F     +++  WNTMI GY Q      +++L
Sbjct: 253 --IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKL 310

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--- 373
           F+ ++  D  V D ++  S + A  Q  +L +G+ +H Y+I +      +  N +I+   
Sbjct: 311 FMDMI--DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYA 368

Query: 374 -----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                            +D V+WN++I+ + Q+G   EGL   ++M K     DSVT   
Sbjct: 369 KCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPDSVTFVL 427

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LLS  S L + + G+  H  +++ G   E +  + L+D+YAK G +    ++F    +  
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA-- 485

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
            D  +WN +IA           F    +M    + P+  T+  +LP C+ +     GK++
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           HG+  +   + NV +G +LI+MYSK G +     VF  + EK+ VT+T +I  +G +G  
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           ++AL  F+ M+  G+ PD++ F+A + ACS++G+V EGL+ FD M+ +Y ++P  EHY C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           V D+L R G + +A EF+  +  + +   +WG+LL +CR  G++ +A+ V+KK+LE+++ 
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDA-SLWGALLSACRARGNTNIAQRVSKKILELNSD 724

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           ++  GY+VL+SNIYA  G W+ V  VR  M+ +GL+KE G SWI++   V  F + D+  
Sbjct: 725 DT--GYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSF 782

Query: 776 PQSHKIYEMLERLAMEMRNAG 796
            Q  K+ ++LE L   M   G
Sbjct: 783 EQYDKVKDLLEYLVRLMAKEG 803


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/807 (30%), Positives = 420/807 (52%), Gaps = 59/807 (7%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPTTV-I 72
           ++    PQL  +HSL      L    I S   +SK  Q   P  +  +F SI+    V +
Sbjct: 30  SSAKNTPQLRTVHSL-IITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYL 88

Query: 73  WNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           WN+II     N L  +A+  Y++M  KK  P    D +T+ SV+ +CA   +L +G  VH
Sbjct: 89  WNSIIRALTHNGLFTQALGYYTEMREKKLQP----DAFTFPSVINSCARILDLELGCIVH 144

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
            H +        ++ N+L++MYS             ++V++D ++Y     VF+ M  R+
Sbjct: 145 EHAMEMGFESDLYIGNALIDMYS-------------RFVDLDNARY-----VFEEMSNRD 186

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
            V+WN+++S Y     + +A+  +      G+ P   +  +V  A  SL   K    V+G
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           ++ K+G     D+ + +  + MY +      AR++F     +++  WNTMI GY Q    
Sbjct: 247 VIEKIG--IAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRH 304

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
             +++LF+ ++  D  V D ++  S + A  Q  +L +G+ +H Y+I +      +  N 
Sbjct: 305 EASVKLFMDMI--DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNI 362

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I+                    +D V+WN++I+ + Q+G   EGL   ++M K     D
Sbjct: 363 LIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLE-SFKMMKMERKPD 421

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFE 469
           SVT   LLS  S L + + G+  H  +++ G   E +  + L+D+YAK G +    ++F 
Sbjct: 422 SVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFS 481

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
              +   D  +WN +IA           F    +M    + P+  T+  +LP C+ +   
Sbjct: 482 YMSA--HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVR 539

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             GK++HG+  +   + NV +G +LI+MYSK G +     VF  + EK+ VT+T +I  +
Sbjct: 540 RQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAF 599

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
           G +G  ++AL  F+ M+  G+ PD++ F+A + ACS++G+V EGL+ FD M+ +Y ++P 
Sbjct: 600 GMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPR 659

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY CV D+L R G + +A EF+  +  + +   +WG+LL +CR  G++ +A+ V+KK+
Sbjct: 660 MEHYACVVDLLARSGLLAQAEEFILSMPMKPDA-SLWGALLSACRARGNTNIAQRVSKKI 718

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE+++ ++  GY+VL+SNIYA  G W+ V  VR  M+ +GL+KE G SWI++   V  F 
Sbjct: 719 LELNSDDT--GYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFR 776

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + D+   Q  K+ ++LE L   M   G
Sbjct: 777 TGDKSFEQYDKVKDLLEYLVRLMAKEG 803


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/688 (32%), Positives = 380/688 (55%), Gaps = 48/688 (6%)

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           +GK +H   +      +  +  SL+N+Y +C     A++V                  F 
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV------------------FQ 254

Query: 185 TMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDY 242
           T+    ++  WN +++   K   ++E +  F  +L    ++P   ++ +V  A S LG  
Sbjct: 255 TIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRV 314

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
               +V+  ++K G  +  D+ V SSA+ MYA+   F+ A K+FD   ER+   WN +I 
Sbjct: 315 GYGKMVHTHVIKSG--FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 372

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            Y Q+  P +A+ELF + +++     D VT  + +S+ ++L +L+ G+++H  ++++  A
Sbjct: 373 CYYQDGQPEKALELFEE-MKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFA 431

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
           L   V +A+++                    ++VVSWN+MI+ +   G     + L   M
Sbjct: 432 LDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 491

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
            ++G      T++++L A S   N  +GK  H Y++R+ +  +  + S LID+Y K G I
Sbjct: 492 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 551

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
            +A  +F+  +    +  +WN MI+GY + G   EA V F  M +  V P+ +T  SVLP
Sbjct: 552 GSAENVFQ--NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLP 609

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC+ +  +E GK++H F I   L+ N  V  +L+DMY+K G ++ A ++F ++PE++ V+
Sbjct: 610 ACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS 669

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T+MI  YG HG +  AL LF  M+    +PD +TF+A+LSACS+AGLVDEG   F+ M 
Sbjct: 670 WTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMI 729

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
            EY  +P+ EHY C+ D+LGRVG++ EAYE ++   +    + +  +L  +C LH   +L
Sbjct: 730 AEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDL 789

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
            E + + L+E D  +  P  +++LSN+YA    W+ V KVR +++E GL+K  GCSWI+V
Sbjct: 790 GEQIGRLLIEKDPDD--PSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 847

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLA 789
           G  ++ F  +D+ HPQ+  IYE +  LA
Sbjct: 848 GKRIHPFVVEDKSHPQADMIYECMSILA 875



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 182/651 (27%), Positives = 298/651 (45%), Gaps = 87/651 (13%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +F +I  P  + +WN ++     N +  E + ++ ++    PY   D +TY SVLKA
Sbjct: 249 AKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHF-PYLKPDAFTYPSVLKA 307

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+    +  GK VH H I+        V +S + MY+ C    DA               
Sbjct: 308 CSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDA--------------- 352

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+FD M  R+V +WN ++S Y +  +  +A+  F  M   G +P +++   V  + 
Sbjct: 353 ---IKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSC 409

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L D +    ++  LV+ G  +  D FV+S+ + MY + GC + A+++F+    +N   
Sbjct: 410 ARLLDLERGKEIHMELVRSG--FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 467

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAY 355
           WN+MI GY         IELF ++ E  E +   +T LS+ L A S+   L LG+ +H Y
Sbjct: 468 WNSMIAGYSLKGDSKSCIELFRRMDE--EGIRPTLTTLSSILMACSRSVNLQLGKFIHGY 525

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           II+N V   + V +++I+                     +VVSWN MIS +V+ G   E 
Sbjct: 526 IIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEA 585

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDM 454
           L++  +M+K G   D++T T++L A S L   + GK+ H +++   +   E +   L+DM
Sbjct: 586 LVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDM 645

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G +  A  IF  N   +RD  +W +MIA Y  +G   EA   F +M + +  P+ V
Sbjct: 646 YAKCGAVDEALHIF--NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKV 703

Query: 515 TIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T  ++L AC+  G ++ G       I  Y     V   + LID+  + G +  A  +  +
Sbjct: 704 TFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 763

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            P+                                 I  D      + SAC     +D G
Sbjct: 764 TPD---------------------------------IREDVGLLSTLFSACHLHKKLDLG 790

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF---VKELGEEGN 681
            QI  L+ ++    PST  Y  +++M   V K  E  +    +KELG + N
Sbjct: 791 EQIGRLLIEKDPDDPST--YIILSNMYASVKKWDEVRKVRLKIKELGLKKN 839


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/706 (30%), Positives = 387/706 (54%), Gaps = 52/706 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVE 170
           +L+ C + R L+  K VH   ++  FSN    V  N + + YS C               
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC--------------- 118

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S  D  C++FD M +RN  +W  +++   +   +++    F  M   GI P   ++ 
Sbjct: 119 ---SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +      L   +  ++V+  +V  G  + +  FV+++ + MYA+L   + + K+F+   
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRG--FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E N   WN MI G+  N+  ++A +LF++++  + +  D  TF+    A+  L++++  +
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAK 292

Query: 351 QLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMISAFVQ 388
           ++  Y ++  V    +V  A+I+                      R    WN MIS +++
Sbjct: 293 EVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLR 352

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG--IHFEG 446
           +G +++ L L  +M +    +D  T  ++ +A + L+   +GK+ HA  ++ G  +++  
Sbjct: 353 SGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS 412

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + + + YAK G ++  R++F + +  DRD  +W +++  Y+Q    ++A   F  M  
Sbjct: 413 ISNAVANAYAKCGSLEDVRKVFNRME--DRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN  T +SVL +C  +  +E G+Q+HG   +  LD +  + ++L+DMY+K G +  
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +I   ++V++T +I G+ QHG+ + AL LFR M   G+EP+A+TF+ VL ACS+
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            GLV+EGLQ F LM++ Y + P  EHY C+ D+L RVG + +A EF+  +  E N + +W
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM-VW 649

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR+HG+ EL E+ A+K+L     NS    +VLLSN Y E G++++   +R  M+
Sbjct: 650 QTLLGACRVHGNVELGELAAQKILSFKAENSAT--YVLLSNTYIESGSYKDGLSLRHVMK 707

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           E+G++KE GCSWI V G +++F + DQ+HP+  KIY  LE L +++
Sbjct: 708 EQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKL 753



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 173/618 (27%), Positives = 314/618 (50%), Gaps = 64/618 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +++  T  W  +I G   N L  +    + +M+    +   D + YS +L+ C
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFP--DQFAYSGILQIC 181

Query: 118 AETRNLRIGKAVHCHF-IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
               ++ +G  VH    IR F++ + FV  +LLNMY+            L+ +E  Y   
Sbjct: 182 IGLDSIELGNMVHAQIVIRGFTSHT-FVSTALLNMYAK-----------LQEIEDSY--- 226

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVF+TM   NVV+WN +++ +   + Y++A   F  M+  G+ P   +F+ V  A+
Sbjct: 227 ----KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAI 282

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN----CLER 292
             L D   A  V G  ++LG +  ++  V ++ I M ++ G    AR IF++    C  R
Sbjct: 283 GMLRDVNKAKEVSGYALELGVD--SNTLVGTALIDMNSKCGSLQEARSIFNSHFITC--R 338

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
               WN MI GY+++    +A+ELF ++ + ++I  D  T+ S  +A++ L+ L LG+++
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQ-NDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 353 HAYIIK-----NFVALPVIVLNAVI----------------ERDVVSWNTMISAFVQNGL 391
           HA  IK     N+V++   V NA                  +RD++SW ++++A+ Q   
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
            D+ + +   M+ +G   +  T +++L + +NL   + G+Q H  + + G+  +  +ES 
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMYAK G +  A+++F  N   + D  +W A+IAG+ Q+G++++A   FR+M++  V 
Sbjct: 518 LVDMYAKCGCLGDAKKVF--NRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE 575

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN VT   VL AC+  G +E G Q      + Y L   +     ++D+ S+ G +N A  
Sbjct: 576 PNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAME 635

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             +++P E N + + T++     HG   + E A     S K      ++ T+V + +   
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA----ENSATYVLLSNTYI 691

Query: 626 YAGLVDEGLQIFDLMQQE 643
            +G   +GL +  +M+++
Sbjct: 692 ESGSYKDGLSLRHVMKEQ 709


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/692 (33%), Positives = 396/692 (57%), Gaps = 54/692 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D++T+  VLKACA++ +++ G+ +H    +   +   FV N+LL  Y  C         G
Sbjct: 6   DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNC--------GG 57

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRP 224
           LK V+          +VFD M  R+VV+WN+++  +     Y EA+  F  M LR G RP
Sbjct: 58  LKDVK----------RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRP 107

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + +S V+V P  + L D  +   ++  +VK G +  + + V ++ + +Y + G    +R+
Sbjct: 108 NMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLD--SQVTVGNALVDVYGKCGYVKDSRR 165

Query: 285 IFDNCLERNTEVWNTMIG--GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           +FD   ERN   WN +I    Y++ N   +A+E+F  +++   +  + VTF S L  + +
Sbjct: 166 VFDEISERNGVSWNAIITSLAYLERNQ--DALEMFRLMID-GGVKPNSVTFSSMLPVLVE 222

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
           L+  D G+++H + ++  +   + V NA+I                    E+++VSWN M
Sbjct: 223 LKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAM 282

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++ F QN L+   + LV +MQ  G + +SVT T +L A + +     GK+ HA  +R G 
Sbjct: 283 VANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGS 342

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + + L DMYAK G +  AR++F+ +    RD+ ++N +I GY+Q     E+   F
Sbjct: 343 SVDLFVSNALTDMYAKCGCLNLARRVFKISL---RDEVSYNILIIGYSQTTNCSESLRLF 399

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M    +  +VV+   V+ AC  +  ++ GK++HG ++R  L  ++F+  +L+D Y K 
Sbjct: 400 LEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKC 459

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G I+ A  VF +IP +++ ++ +MILGYG  G    A++LF +MK  G+E D+++++AVL
Sbjct: 460 GRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVL 519

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACS+ GLV+EG + F+ MQ +  I+P+  HY C+ D+LGR G + EA + ++ L  E +
Sbjct: 520 SACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPD 578

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              +WG+LLG+CR+HG+ ELA   A+ L ++  ++S  GY+ +LSN+YAE G W+  ++V
Sbjct: 579 A-NVWGALLGACRIHGYIELAHWAAEHLFKLKPQHS--GYYSVLSNMYAEAGKWDEANQV 635

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
           RK M+ RG +K  GCSW+ +   V+ F + ++
Sbjct: 636 RKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 174/643 (27%), Positives = 302/643 (46%), Gaps = 82/643 (12%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           +++FD +     V WN++I  F  +    EAI L+ +M   S +   +  +  SVL  CA
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRP-NMVSIVSVLPVCA 120

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
              +   G+ +HC+ ++   +    V N+L+++Y  C    D+                 
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSR---------------- 164

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VFD +  RN V+WN I++     ER  +A+  FR+M+  G++P++++F ++ P L  
Sbjct: 165 --RVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVE 222

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L  +     ++G  ++ G E  +D+FVA++ I MYA+ G    A  +F+   E+N   WN
Sbjct: 223 LKLFDFGKEIHGFSLRFGLE--SDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWN 280

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            M+  + QN   + A++L V+ ++ D  + + VTF + L A +++  L  G+++HA  I+
Sbjct: 281 AMVANFAQNRLELAAVDL-VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIR 339

Query: 359 NFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
              ++ + V NA+ +                   RD VS+N +I  + Q     E L L 
Sbjct: 340 TGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDEVSYNILIIGYSQTTNCSESLRLF 399

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
            EM  +G  +D V+   ++SA +NL     GK+ H   +R  +H    + + L+D Y K 
Sbjct: 400 LEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKC 459

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G I  A ++F +  S  RD A+WN+MI GY   G L  A   F  M E  V  + V+  +
Sbjct: 460 GRIDLAGKVFRQIPS--RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIA 517

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL AC+  G +E GK+       ++  QN+                           +  
Sbjct: 518 VLSACSHGGLVEEGKKY----FEHMQVQNI---------------------------KPT 546

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            + Y  M+   G+ G+ E A+ L  S+    IEPDA  + A+L AC   G ++       
Sbjct: 547 QMHYACMVDLLGRAGLIEEAVKLIESLP---IEPDANVWGALLGACRIHGYIELAHWA-- 601

Query: 639 LMQQEYKIQPS-TEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             +  +K++P  + +Y  +++M    GK  EA +  K +   G
Sbjct: 602 -AEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRG 643



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 220/470 (46%), Gaps = 46/470 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++FD I+    V WN II          +A+ ++  M         ++ T+SS+L   
Sbjct: 163 SRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGG--VKPNSVTFSSMLPVL 220

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E +    GK +H   +R       FV N+L++MY+    SL A                
Sbjct: 221 VELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQAS--------------- 265

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF+ +  +N+V+WN +V+ + +    + AV   R M   G  P++++F NV PA +
Sbjct: 266 ---NVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACA 322

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G  +    ++   ++ GS    DLFV+++   MYA+ GC + AR++F   L R+   +
Sbjct: 323 RIGFLRPGKEIHARAIRTGSSV--DLFVSNALTDMYAKCGCLNLARRVFKISL-RDEVSY 379

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I GY Q  +  E++ LF++ + +  +  D V+++  +SA + L  L  G+++H   +
Sbjct: 380 NILIIGYSQTTNCSESLRLFLE-MGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAV 438

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   + + NA+++                    RD  SWN+MI  +   G     + 
Sbjct: 439 RKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAIN 498

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
           L   M++ G   DSV+  A+LSA S+    + GK+   ++    I    M  + ++D+  
Sbjct: 499 LFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLG 558

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++GLI+ A ++ E     + D   W A++     +G +E A  A   + +
Sbjct: 559 RAGLIEEAVKLIESLPI-EPDANVWGALLGACRIHGYIELAHWAAEHLFK 607



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 190/418 (45%), Gaps = 40/418 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + GR   A  +F+ I     V WN ++  F  N L   A+ L  QM+        ++ T+
Sbjct: 257 KSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIP--NSVTF 314

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           ++VL ACA    LR GK +H   IR  S+   FV N+L +MY+ C               
Sbjct: 315 TNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKC--------------- 359

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                 +L  +VF  +  R+ V++N ++  Y +T    E++R F  M   G++   +S++
Sbjct: 360 ---GCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYM 415

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V  A ++L   K    V+GL V+        LF+A++ +  Y + G  D A K+F    
Sbjct: 416 GVISACANLAALKQGKEVHGLAVR--KHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP 473

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+T  WN+MI GY        AI LF + ++ D + +D V++++ LSA S    ++ G+
Sbjct: 474 SRDTASWNSMILGYGMLGELTIAINLF-EAMKEDGVEYDSVSYIAVLSACSHGGLVEEGK 532

Query: 351 QLHAYI-IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           +   ++ ++N            I+   + +  M+    + GL +E + L+  +  +    
Sbjct: 533 KYFEHMQVQN------------IKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEP--- 577

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           D+    ALL A       ++      +L +      G  S L +MYA++G    A Q+
Sbjct: 578 DANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQV 635


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/706 (30%), Positives = 387/706 (54%), Gaps = 52/706 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVE 170
           +L+ C + R L+  K VH   ++  FSN    V  N + + YS C               
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC--------------- 118

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S  D  C++FD M +RN  +W  +++   +   +++    F  M   GI P   ++ 
Sbjct: 119 ---SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYS 175

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +      L   +  ++V+  +V  G  + +  FV+++ + MYA+L   + + K+F+   
Sbjct: 176 GILQICIGLDSIELGNMVHAQIVIRG--FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT 233

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E N   WN MI G+  N+  ++A +LF++++  + +  D  TF+    A+  L++++  +
Sbjct: 234 EVNVVSWNAMITGFTSNDLYLDAFDLFLRMMG-EGVTPDAQTFIGVAKAIGMLRDVNKAK 292

Query: 351 QLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMISAFVQ 388
           ++  Y ++  V    +V  A+I+                      R    WN MIS +++
Sbjct: 293 EVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLR 352

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG--IHFEG 446
           +G +++ L L  +M +    +D  T  ++ +A + L+   +GK+ HA  ++ G  +++  
Sbjct: 353 SGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS 412

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + + + YAK G ++  R++F + +  DRD  +W +++  Y+Q    ++A   F  M  
Sbjct: 413 ISNAVANAYAKCGSLEDVRKVFNRME--DRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN  T +SVL +C  +  +E G+Q+HG   +  LD +  + ++L+DMY+K G +  
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +I   ++V++T +I G+ QHG+ + AL LFR M   G+EP+A+TF+ VL ACS+
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSH 590

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            GLV+EGLQ F LM++ Y + P  EHY C+ D+L RVG + +A EF+  +  E N + +W
Sbjct: 591 GGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEM-VW 649

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR+HG+ EL E+ A+K+L     NS    +VLLSN Y E G++++   +R  M+
Sbjct: 650 QTLLGACRVHGNVELGELAAQKILSFKAENSAT--YVLLSNTYIESGSYKDGLSLRHLMK 707

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           E+G++KE GCSWI V G +++F + DQ+HP+  KIY  LE L +++
Sbjct: 708 EQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKL 753



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 314/618 (50%), Gaps = 64/618 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +++  T  W  +I G   N L  +    + +M+    +   D + YS +L+ C
Sbjct: 124 ACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFP--DQFAYSGILQIC 181

Query: 118 AETRNLRIGKAVHCHF-IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
               ++ +G  VH    IR F++ + FV  +LLNMY+            L+ +E  Y   
Sbjct: 182 IGLDSIELGNMVHAQIVIRGFTSHT-FVSTALLNMYAK-----------LQEIEDSY--- 226

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVF+TM   NVV+WN +++ +   + Y++A   F  M+  G+ P   +F+ V  A+
Sbjct: 227 ----KVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAI 282

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN----CLER 292
             L D   A  V G  ++LG +  ++  V ++ I M ++ G    AR IF++    C  R
Sbjct: 283 GMLRDVNKAKEVSGYALELGVD--SNTLVGTALIDMNSKCGSLQEARSIFNSHFITC--R 338

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
               WN MI GY+++    +A+ELF ++ + ++I  D  T+ S  +A++ L+ L LG+++
Sbjct: 339 FNAPWNAMISGYLRSGFNEKALELFAKMCQ-NDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 353 HAYIIK-----NFVALPVIVLNAVI----------------ERDVVSWNTMISAFVQNGL 391
           HA  IK     N+V++   V NA                  +RD++SW ++++A+ Q   
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSE 457

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
            D+ + +   M+ +G   +  T +++L + +NL   + G+Q H  + + G+  +  +ES 
Sbjct: 458 WDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESA 517

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMYAK G +  A+++F  N   + D  +W A+IAG+ Q+G++++A   FR+M++  V 
Sbjct: 518 LVDMYAKCGCLGDAKKVF--NRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE 575

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN VT   VL AC+  G +E G Q      + Y L   +     ++D+ S+ G +N A  
Sbjct: 576 PNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAME 635

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             +++P E N + + T++     HG   + E A     S K      ++ T+V + +   
Sbjct: 636 FISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKA----ENSATYVLLSNTYI 691

Query: 626 YAGLVDEGLQIFDLMQQE 643
            +G   +GL +  LM+++
Sbjct: 692 ESGSYKDGLSLRHLMKEQ 709


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 227/637 (35%), Positives = 359/637 (56%), Gaps = 33/637 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD ++ ++V  WN+++S Y +   +  AV  F   L      S        P + + G+ 
Sbjct: 98  FDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQS--DHYTFPPVIRACGNL 155

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                V+ L++KLG E   D+++A+S I  Y+  G    A  +FDN + R+   WN MI 
Sbjct: 156 DDGRKVHCLVLKLGFE--CDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMIS 213

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G+  N    EA+E+F + +    +  D VT  S L    QL ++  G  +H Y IK  + 
Sbjct: 214 GFYLNGKVAEALEVFDE-MRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLE 272

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + V NA+I                     RD+VSWN++++AF QN      L +  +M
Sbjct: 273 FDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKM 332

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG--IHFEGMESYLIDMYAKSGL 460
              G + D +T+ +L S A+ L N    +  H ++ R    +H   + + +IDMYAK G 
Sbjct: 333 HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGF 392

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASV 519
           I +AR++FE      +D  +WN++I GY+QNGL  EA   +  M  ++   PN  T  S+
Sbjct: 393 IDSARKVFEGLPV--KDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSI 450

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L A + +G ++ G + HG  I+  L  ++FV T L+DMY K G +  A ++F ++P ++S
Sbjct: 451 LTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS 510

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  +I  +G HG   +A+ LF+ M+  G++PD ITFV++LSACS++GLVDEG   F L
Sbjct: 511 VSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQL 570

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           MQ+ Y I+PS +HY C+ D+ GR G + +A+ FVK +    +V  +WG+LLG+CR+H + 
Sbjct: 571 MQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDV-SVWGALLGACRIHENV 629

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL   V+  LL++++ N   GY+VLLSNIYA+ G+WE VD+VR   R+RGL+K  G S I
Sbjct: 630 ELVRTVSDHLLKVESEN--VGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSI 687

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V   ++ F + +Q HP+  +IY  L  L  +M++ G
Sbjct: 688 EVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIG 724



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 259/525 (49%), Gaps = 51/525 (9%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           A  ++ LLV  G      +F+++  I  YA LG    AR  FD    ++   WN+MI  Y
Sbjct: 59  AKQLHALLVVSGK--TQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAY 116

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------ 358
            +  H   A++ F + L    +  D  TF   + A      LD G+++H  ++K      
Sbjct: 117 ARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRKVHCLVLKLGFECD 173

Query: 359 --------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                          FV+L   + + ++ RD+ +WN MIS F  NG   E L +  EM+ 
Sbjct: 174 VYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRF 233

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           +   +DSVT+++LL     L +   G   H Y ++ G+ F+  + + LI+MYAK G +++
Sbjct: 234 KSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRS 293

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           A  IF  N    RD  +WN+++A + QN     A   + +M    V P+++T+ S+    
Sbjct: 294 AETIF--NQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVA 351

Query: 524 NPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
             +GN    + +HGF  R  + L  ++ +G ++IDMY+K G I+ A  VF  +P K+ ++
Sbjct: 352 AELGNFLSSRSIHGFVTRRCWFL-HDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVIS 410

Query: 582 YTTMILGYGQHGMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           + ++I GY Q+G++  A+ ++ SM+   G  P+  T+V++L+A S  G + +G++    +
Sbjct: 411 WNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL 470

Query: 641 QQE---YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
            +    + I  ST    C+ DM G+ GK+ +A     E+  + +V   W +++    LHG
Sbjct: 471 IKNFLYFDIFVST----CLVDMYGKCGKLADALSLFYEVPHQSSV--SWNAIISCHGLHG 524

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA-------EEGNW 735
           +   A    K   EM +    P +   +S + A       +EG W
Sbjct: 525 YGLKA---VKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQW 566



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 265/562 (47%), Gaps = 60/562 (10%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           PH AR  FD I       WN++I  +      + A+  +++   S+ +   D+YT+  V+
Sbjct: 92  PH-ARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFL-STSFLQSDHYTFPPVI 149

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           +AC    NL  G+ VHC  ++       ++  S ++ YS                   + 
Sbjct: 150 RACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSR------------------FG 188

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
              L C +FD M  R++  WN ++S +    +  EA+  F  M    +   +++  ++ P
Sbjct: 189 FVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLP 248

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
               L D  S  +++   +KLG E+  DLFV ++ I MYA+ G    A  IF+    R+ 
Sbjct: 249 ICVQLDDIISGVLIHVYAIKLGLEF--DLFVCNALINMYAKFGELRSAETIFNQMKVRDI 306

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN+++  + QN  PV A+ ++ ++  +  +V D +T +S  S  ++L      + +H 
Sbjct: 307 VSWNSLLAAFEQNKKPVIALGVYNKMHSIG-VVPDLLTLVSLASVAAELGNFLSSRSIHG 365

Query: 355 YIIKNFVALPVIVL-NAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
           ++ +    L  I L NA+I+                    +DV+SWN++I+ + QNGL +
Sbjct: 366 FVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLAN 425

Query: 394 EGLMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           E + +   M+   G + +  T  ++L+A S L     G + H  L+++ ++F+  + + L
Sbjct: 426 EAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCL 485

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G +  A  +F   +   +   +WNA+I+ +  +G   +A   F++M    V P
Sbjct: 486 VDMYGKCGKLADALSLFY--EVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKP 543

Query: 512 NVVTIASVLPACNPMGNIELGK---QL--HGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           + +T  S+L AC+  G ++ G+   QL    + IR  L         ++D++ ++G +  
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHY----GCMVDLFGRAGHLEK 599

Query: 567 AANVFAKIPEKNSVTYTTMILG 588
           A N    +P +  V+    +LG
Sbjct: 600 AFNFVKNMPVRPDVSVWGALLG 621


>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 249/831 (29%), Positives = 412/831 (49%), Gaps = 99/831 (11%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC-NNLPYE 88
           L P   K      +  L+   + G      +LF  + +   VIWN ++ G     +   E
Sbjct: 4   LCPFSSKGYDSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAE 63

Query: 89  AILLYSQM---KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
            + L+  M    ++ P    ++ T + VL  CA  R    GK+VH + I+          
Sbjct: 64  VMRLFRAMHMVNEAKP----NSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAG 118

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK----VFDTMRRRNVVAWNTIVSWY 201
           N+L++MY+ C                      LVC      F+ +  ++VV+WN +++ +
Sbjct: 119 NALISMYAKC---------------------GLVCSDAYAAFNRIEFKDVVSWNAVIAGF 157

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL---GDYKSADVVYGLLVKLGSE 258
            + +   EA + F  ML+  I+P+  +  ++ P  +SL     Y+    V+  +++   E
Sbjct: 158 SENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRR-ME 216

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
            V D+ V +S +  Y  +G  + A  +F N   R+   WN +I GY  N   ++A+ELF 
Sbjct: 217 LVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFS 276

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-------------------- 358
           + + L+ I  D VT +S L A + +  L + + +H YII+                    
Sbjct: 277 EFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAK 336

Query: 359 -NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            N+    +     +  +D++SWN ++ AF ++G +   + L++ M ++G   DS+T+  +
Sbjct: 337 CNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTI 396

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG-----MESYLIDMYAKSGLIKTARQIF---- 468
           +   + +      K+TH+Y +R G+  +G     + + ++D YAK G +K A  IF    
Sbjct: 397 IQYYAAVSRVKKVKETHSYSIRFGL-LQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 455

Query: 469 EK--------------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           EK                          N   + D  TWN M+  Y +N   ++A   F 
Sbjct: 456 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFH 515

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           ++    + P++VTI S+LPAC  M ++ + +Q HG+ IR   + +V +  + IDMYSK G
Sbjct: 516 ELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCG 574

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A  +F   P+K+ V +T M+ G+  HGM E AL +F  M   G++PD +   AVL 
Sbjct: 575 SVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLF 634

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+AGLVDEG +IF+ +++ +  QP+ E Y CV D+L R G++ +AY FV  +  E N 
Sbjct: 635 ACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANA 694

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LLG+CR H   EL  VVA  L ++++ N   G +V++SN+YA +  W+ V ++R
Sbjct: 695 -NIWGTLLGACRTHHEVELGRVVADHLFKIESDN--IGNYVVMSNLYAADARWDGVMEIR 751

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           + MR R L+K  GCSWI+VG   N F + D  HPQ   IY  L  L   M+
Sbjct: 752 RLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQLMK 802


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/712 (32%), Positives = 382/712 (53%), Gaps = 47/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ TY  + + C   R+  +GK V  H I+     + +  N+L+ ++S C + L+A    
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEAR--- 116

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          + FD++  + VV WN I++ Y +     EA   FR M+   + PS
Sbjct: 117 ---------------QTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+F+ V  A SS    K     +  ++K+G  +V+D  + ++ + MY + G  D AR++
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVG--FVSDFRIGTALVSMYVKGGSMDGARQV 219

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD   +R+   +N MIGGY ++    +A +LF + ++ +    + ++FLS L   S  + 
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYR-MQQEGFKPNRISFLSILDGCSTPEA 278

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L  G+ +HA  +   +   V V  A+I                     RDVVSW  MI  
Sbjct: 279 LAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRG 338

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + +N   ++   L   MQ++G   D +T   +++A ++  +  + ++ H+ ++R G   +
Sbjct: 339 YAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTD 398

Query: 446 GM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            + ++ L+ MYAK G IK ARQ+F+      RD  +W+AMI  Y +NG  EEAF  F  M
Sbjct: 399 LLVDTALVHMYAKCGAIKDARQVFDAMSR--RDVVSWSAMIGAYVENGCGEEAFETFHLM 456

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             +NV P+VVT  ++L AC  +G ++LG +++  +I+  L  ++ VG +LI+M  K G I
Sbjct: 457 KRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSI 516

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F  + +++ VT+  MI GY  HG +  AL LF  M      P+++TFV VLSAC
Sbjct: 517 ERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSAC 576

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S AG V+EG + F  +     I P+ E Y C+ D+LGR G++ EA   +  +  + N   
Sbjct: 577 SRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNS-S 635

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW +LL +CR++G+ ++AE  A++ L  +  +     +V LS++YA  G WENV KVRK 
Sbjct: 636 IWSTLLAACRIYGNLDVAERAAERCLMSEPYDG--AVYVQLSHMYAAAGMWENVAKVRKV 693

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M  RG+RKE GC+WI+V G ++ F  +D+ HPQ+ +IY  L RL   ++  G
Sbjct: 694 MESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREG 745



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 171/585 (29%), Positives = 280/585 (47%), Gaps = 63/585 (10%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           +L  IC  G    ARQ FDS+   T V WN II G+       EA  L+ QM   +   S
Sbjct: 104 KLHSIC--GNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
               T+  VL AC+    L++GK  H   I+        +  +L++MY            
Sbjct: 162 I--ITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMY------------ 207

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                 V     D   +VFD + +R+V  +N ++  Y K+    +A + F  M + G +P
Sbjct: 208 ------VKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKP 261

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + ISF+++    S+         V+   +  G   V+D+ VA++ I MY   G  + AR+
Sbjct: 262 NRISFLSILDGCSTPEALAWGKAVHAQCMNTG--LVDDVRVATALIRMYMGCGSIEGARR 319

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD    R+   W  MI GY +N++  +A  LF  + E + I  D +T++  ++A +   
Sbjct: 320 VFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE-EGIQPDRITYIHIINACASSA 378

Query: 345 ELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMIS 384
           +L L +++H+ +++      ++                    V +A+  RDVVSW+ MI 
Sbjct: 379 DLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIG 438

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-- 442
           A+V+NG  +E     + M++     D VT   LL+A  +L   D+G + +   ++  +  
Sbjct: 439 AYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVS 498

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           H   + + LI+M  K G I+ AR IFE  +   RD  TWN MI GY+ +G   EA   F 
Sbjct: 499 HIP-VGNALINMNVKHGSIERARYIFE--NMVQRDVVTWNVMIGGYSLHGNAREALDLFD 555

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT-----SLIDM 557
           +ML+    PN VT   VL AC+  G +E G++   FS  YLLD    V T      ++D+
Sbjct: 556 RMLKERFRPNSVTFVGVLSACSRAGFVEEGRRF--FS--YLLDGRGIVPTMELYGCMVDL 611

Query: 558 YSKSGVINYAANVFAKIPEK-NSVTYTTMILG---YGQHGMSERA 598
             ++G ++ A  +  ++P K NS  ++T++     YG   ++ERA
Sbjct: 612 LGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERA 656



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 124/218 (56%), Gaps = 3/218 (1%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQI 467
           IDS T   L      LR+  +GKQ   ++++ G      E + LI +++  G +  ARQ 
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+  +  ++   TWNA+IAGY Q G ++EAF  FRQM++  + P+++T   VL AC+   
Sbjct: 119 FDSVE--NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPA 176

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            ++LGK+ H   I+     +  +GT+L+ MY K G ++ A  VF  + +++  T+  MI 
Sbjct: 177 GLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIG 236

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           GY + G  E+A  LF  M+  G +P+ I+F+++L  CS
Sbjct: 237 GYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCS 274


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 413/784 (52%), Gaps = 49/784 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + L+     G    A  LFD +  P  V WN ++ G+    +  E++ L+
Sbjct: 120 MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 179

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M +     S D  T++ +LK+C+    L +G  VH   ++          ++L++MY 
Sbjct: 180 VEMARRG--VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 237

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C  SLD                D +C  F  M  RN V+W   ++  V+ E+YV  +  
Sbjct: 238 KC-RSLD----------------DALC-FFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 279

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R+G+  S  S+ + F + +++    +   ++   +K  +++ +D  V ++ + +Y
Sbjct: 280 FIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK--NKFSSDRVVGTAIVDVY 337

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+      AR+ F        E  N M+ G V+    +EA+ LF Q +    I FD V+ 
Sbjct: 338 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSL 396

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
               SA ++ +    GQQ+H   IK+   + + V NAV+                    +
Sbjct: 397 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 456

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D VSWN +I+A  QNG  D+ ++   EM + G   D  T  ++L A + LR+ + G   
Sbjct: 457 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 516

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H  +++ G+  +  + S ++DMY K G+I  A+++ ++   G +   +WNA+++G++ N 
Sbjct: 517 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNK 574

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEA   F +ML+  + P+  T A+VL  C  +  IELGKQ+HG  I+  +  + ++ +
Sbjct: 575 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 634

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  +  VF K+ +++ V++  MI GY  HG+   AL +F  M+   + P
Sbjct: 635 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 694

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           +  TFVAVL ACS+ GL D+G + F LM   YK++P  EH+ C+ D+LGR     EA +F
Sbjct: 695 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 754

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  +  + + + IW +LL  C++    E+AE+ A  +L +D  +S    ++LLSN+YAE 
Sbjct: 755 INSMPFQADAV-IWKTLLSICKIRQDVEIAELAASNVLLLDPDDS--SVYILLSNVYAES 811

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W +V + R+ +++  L+KE GCSWI+V   ++ F   D+ HP+S ++YEML  L  EM
Sbjct: 812 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 871

Query: 793 RNAG 796
           + +G
Sbjct: 872 KLSG 875



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 178/702 (25%), Positives = 299/702 (42%), Gaps = 111/702 (15%)

Query: 97  KKSSPYTSCDNYTYSSVLKACAET-------RNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           ++  P  +    T+S V ++CA+              + V   F+     P+ FV N LL
Sbjct: 47  QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFV-----PTAFVSNCLL 101

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT------------- 196
            MY+ C  +  A                   +VFD M RR+ V+WNT             
Sbjct: 102 QMYARCAGAACAR------------------RVFDAMPRRDTVSWNTMLTAYSHAGDIST 143

Query: 197 ------------IVSW------YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
                       +VSW      Y +   + E+V  F  M R G+ P   +F  +  + S+
Sbjct: 144 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 203

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L +      V+ L VK G E   D+   S+ + MY +    D A   F    ERN   W 
Sbjct: 204 LEELSLGVQVHALAVKTGLEI--DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 261

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
             I G VQN   V  +ELF+++  L  +     ++ SA  + + +  L+ G+QLHA+ IK
Sbjct: 262 AAIAGCVQNEQYVRGLELFIEMQRLG-LGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 320

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           N  +   +V  A+++                      V + N M+   V+ GL  E + L
Sbjct: 321 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGL 380

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M +     D V+++ + SA +  +    G+Q H   ++ G   +  + + ++D+Y K
Sbjct: 381 FQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 440

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
              +  A  IF+      +D  +WNA+IA   QNG  ++  + F +ML   + P+  T  
Sbjct: 441 CKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 498

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SVL AC  + ++E G  +H   I+  L  + FV ++++DMY K G+I+ A  +  +I  +
Sbjct: 499 SVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ 558

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             V++  ++ G+  +  SE A   F  M   G++PD  TF  VL  C+    ++ G QI 
Sbjct: 559 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 618

Query: 638 ------DLMQQEYKIQPSTEHYCCVADMLGR--VGKVVEAYEFVKELGEEGNVLEIWGSL 689
                 +++  EY      + Y    DM     V + VE  +FV            W ++
Sbjct: 619 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-----------WNAM 667

Query: 690 LGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNIYA 730
           +    LHG      V A ++ E M   N +P +   ++ + A
Sbjct: 668 ICGYALHGLG----VEALRMFERMQKENVVPNHATFVAVLRA 705



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 91/238 (38%), Gaps = 38/238 (15%)

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV- 548
           +  L E A +   Q     V P  VT + V  +C   G  E          R ++   V 
Sbjct: 34  RRALAEHARMPAEQQQPPPVAPARVTFSRVFQSCAQAGR-EALAAGRAAHARMVVSGFVP 92

Query: 549 --FVGTSLIDM-------------------------------YSKSGVINYAANVFAKIP 575
             FV   L+ M                               YS +G I+ A  +F  +P
Sbjct: 93  TAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP 152

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           + + V++  ++ GY Q GM + ++ LF  M   G+ PD  TF  +L +CS    +  G+Q
Sbjct: 153 DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ 212

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  L  +   ++        + DM G+   + +A  F   + E   V   WG+ +  C
Sbjct: 213 VHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWV--SWGAAIAGC 267


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 413/784 (52%), Gaps = 49/784 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + L+     G    A  LFD +  P  V WN ++ G+    +  E++ L+
Sbjct: 78  MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 137

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M +     S D  T++ +LK+C+    L +G  VH   ++          ++L++MY 
Sbjct: 138 VEMARRG--VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C  SLD                D +C  F  M  RN V+W   ++  V+ E+YV  +  
Sbjct: 196 KC-RSLD----------------DALC-FFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 237

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R+G+  S  S+ + F + +++    +   ++   +K  +++ +D  V ++ + +Y
Sbjct: 238 FIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK--NKFSSDRVVGTAIVDVY 295

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+      AR+ F        E  N M+ G V+    +EA+ LF Q +    I FD V+ 
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSL 354

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
               SA ++ +    GQQ+H   IK+   + + V NAV+                    +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D VSWN +I+A  QNG  D+ ++   EM + G   D  T  ++L A + LR+ + G   
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H  +++ G+  +  + S ++DMY K G+I  A+++ ++   G +   +WNA+++G++ N 
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNK 532

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEA   F +ML+  + P+  T A+VL  C  +  IELGKQ+HG  I+  +  + ++ +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  +  VF K+ +++ V++  MI GY  HG+   AL +F  M+   + P
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 652

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           +  TFVAVL ACS+ GL D+G + F LM   YK++P  EH+ C+ D+LGR     EA +F
Sbjct: 653 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 712

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  +  + + + IW +LL  C++    E+AE+ A  +L +D  +S    ++LLSN+YAE 
Sbjct: 713 INSMPFQADAV-IWKTLLSICKIRQDVEIAELAASNVLLLDPDDS--SVYILLSNVYAES 769

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W +V + R+ +++  L+KE GCSWI+V   ++ F   D+ HP+S ++YEML  L  EM
Sbjct: 770 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829

Query: 793 RNAG 796
           + +G
Sbjct: 830 KLSG 833



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 178/702 (25%), Positives = 299/702 (42%), Gaps = 111/702 (15%)

Query: 97  KKSSPYTSCDNYTYSSVLKACAET-------RNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           ++  P  +    T+S V ++CA+              + V   F+     P+ FV N LL
Sbjct: 5   QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFV-----PTAFVSNCLL 59

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT------------- 196
            MY+ C  +  A                   +VFD M RR+ V+WNT             
Sbjct: 60  QMYARCAGAACAR------------------RVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 197 ------------IVSW------YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
                       +VSW      Y +   + E+V  F  M R G+ P   +F  +  + S+
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L +      V+ L VK G E   D+   S+ + MY +    D A   F    ERN   W 
Sbjct: 162 LEELSLGVQVHALAVKTGLEI--DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 219

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
             I G VQN   V  +ELF+++  L  +     ++ SA  + + +  L+ G+QLHA+ IK
Sbjct: 220 AAIAGCVQNEQYVRGLELFIEMQRLG-LGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           N  +   +V  A+++                      V + N M+   V+ GL  E + L
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGL 338

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M +     D V+++ + SA +  +    G+Q H   ++ G   +  + + ++D+Y K
Sbjct: 339 FQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 398

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
              +  A  IF+      +D  +WNA+IA   QNG  ++  + F +ML   + P+  T  
Sbjct: 399 CKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 456

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SVL AC  + ++E G  +H   I+  L  + FV ++++DMY K G+I+ A  +  +I  +
Sbjct: 457 SVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ 516

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             V++  ++ G+  +  SE A   F  M   G++PD  TF  VL  C+    ++ G QI 
Sbjct: 517 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 576

Query: 638 ------DLMQQEYKIQPSTEHYCCVADMLGR--VGKVVEAYEFVKELGEEGNVLEIWGSL 689
                 +++  EY      + Y    DM     V + VE  +FV            W ++
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-----------WNAM 625

Query: 690 LGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNIYA 730
           +    LHG      V A ++ E M   N +P +   ++ + A
Sbjct: 626 ICGYALHGLG----VEALRMFERMQKENVVPNHATFVAVLRA 663


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/784 (30%), Positives = 413/784 (52%), Gaps = 49/784 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + L+     G    A  LFD +  P  V WN ++ G+    +  E++ L+
Sbjct: 78  MPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLF 137

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M +     S D  T++ +LK+C+    L +G  VH   ++          ++L++MY 
Sbjct: 138 VEMARRG--VSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C  SLD                D +C  F  M  RN V+W   ++  V+ E+YV  +  
Sbjct: 196 KC-RSLD----------------DALC-FFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 237

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R+G+  S  S+ + F + +++    +   ++   +K  +++ +D  V ++ + +Y
Sbjct: 238 FIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK--NKFSSDRVVGTAIVDVY 295

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+      AR+ F        E  N M+ G V+    +EA+ LF Q +    I FD V+ 
Sbjct: 296 AKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLF-QFMIRSSIRFDVVSL 354

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
               SA ++ +    GQQ+H   IK+   + + V NAV+                    +
Sbjct: 355 SGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQ 414

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D VSWN +I+A  QNG  D+ ++   EM + G   D  T  ++L A + LR+ + G   
Sbjct: 415 KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMV 474

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H  +++ G+  +  + S ++DMY K G+I  A+++ ++   G +   +WNA+++G++ N 
Sbjct: 475 HDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNK 532

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEA   F +ML+  + P+  T A+VL  C  +  IELGKQ+HG  I+  +  + ++ +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  +  VF K+ +++ V++  MI GY  HG+   AL +F  M+   + P
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 652

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           +  TFVAVL ACS+ GL D+G + F LM   YK++P  EH+ C+ D+LGR     EA +F
Sbjct: 653 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 712

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  +  + + + IW +LL  C++    E+AE+ A  +L +D  +S    ++LLSN+YAE 
Sbjct: 713 INSMPFQADAV-IWKTLLSICKIRQDVEIAELAASNVLLLDPDDS--SVYILLSNVYAES 769

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W +V + R+ +++  L+KE GCSWI+V   ++ F   D+ HP+S ++YEML  L  EM
Sbjct: 770 GKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEM 829

Query: 793 RNAG 796
           + +G
Sbjct: 830 KLSG 833



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 178/702 (25%), Positives = 299/702 (42%), Gaps = 111/702 (15%)

Query: 97  KKSSPYTSCDNYTYSSVLKACAET-------RNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           ++  P  +    T+S V ++CA+              + V   F+     P+ FV N LL
Sbjct: 5   QQQPPPVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFV-----PNAFVSNCLL 59

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT------------- 196
            MY+ C  +  A                   +VFD M RR+ V+WNT             
Sbjct: 60  QMYARCAGAACAR------------------RVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 197 ------------IVSW------YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
                       +VSW      Y +   + E+V  F  M R G+ P   +F  +  + S+
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L +      V+ L VK G E   D+   S+ + MY +    D A   F    ERN   W 
Sbjct: 162 LEELSLGVQVHALAVKTGLEI--DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWG 219

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
             I G VQN   V  +ELF+++  L  +     ++ SA  + + +  L+ G+QLHA+ IK
Sbjct: 220 AAIAGCVQNEQYVRGLELFIEMQRLG-LGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           N  +   +V  A+++                      V + N M+   V+ GL  E + L
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGL 338

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M +     D V+++ + SA +  +    G+Q H   ++ G   +  + + ++D+Y K
Sbjct: 339 FQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGK 398

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
              +  A  IF+      +D  +WNA+IA   QNG  ++  + F +ML   + P+  T  
Sbjct: 399 CKALMEAYLIFQGMKQ--KDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYG 456

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SVL AC  + ++E G  +H   I+  L  + FV ++++DMY K G+I+ A  +  +I  +
Sbjct: 457 SVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQ 516

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             V++  ++ G+  +  SE A   F  M   G++PD  TF  VL  C+    ++ G QI 
Sbjct: 517 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 576

Query: 638 ------DLMQQEYKIQPSTEHYCCVADMLGR--VGKVVEAYEFVKELGEEGNVLEIWGSL 689
                 +++  EY      + Y    DM     V + VE  +FV            W ++
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS-----------WNAM 625

Query: 690 LGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNIYA 730
           +    LHG      V A ++ E M   N +P +   ++ + A
Sbjct: 626 ICGYALHGLG----VEALRMFERMQKENVVPNHATFVAVLRA 663


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/764 (31%), Positives = 396/764 (51%), Gaps = 81/764 (10%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EAI L   +K+     + +  TY  V++ CA+ R    GK VH            ++ NS
Sbjct: 39  EAIQLLGIIKQRGLLVNSN--TYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L+N YS       AE                  +VF  M  R+VV W+++++ Y      
Sbjct: 97  LINFYSKFEDVASAE------------------QVFRRMTLRDVVTWSSMIAAYAGNNHP 138

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
            +A   F  M    I P+ I+F+++  A ++    +    ++ ++  +G E   D+ VA+
Sbjct: 139 AKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGME--TDVAVAT 196

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + I MY++ G    A ++F    ERN   W  +I    Q+    EA EL+ Q+L+   I 
Sbjct: 197 ALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG-IS 255

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------- 372
            + VTF+S L++ +  + L+ G+++H++I +  +   +IV NA+I               
Sbjct: 256 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREI 315

Query: 373 -----ERDVVSWNTMISAFVQNGLDD-----EGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                +RDV+SW+ MI+ + Q+G  D     E   L+  M+++G   + VT  ++L A +
Sbjct: 316 FDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACT 375

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN---------- 471
                + G+Q HA L + G   +  +++ + +MYAK G I  A Q+F K           
Sbjct: 376 AHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTS 435

Query: 472 ------DSGD-------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
                   GD             R+  +WN MIAGY QNG + + F     M      P+
Sbjct: 436 FLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPD 495

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VT+ ++L AC  +  +E GK +H  +++  L+ +  V TSLI MYSK G +  A  VF 
Sbjct: 496 RVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFD 555

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           K+  +++V +  M+ GYGQHG    A+ LF+ M    + P+ IT  AV+SACS AGLV E
Sbjct: 556 KMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQE 615

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G +IF +MQ+++K+ P  +HY C+ D+LGR G++ EA EF++ +  E ++  +W +LLG+
Sbjct: 616 GREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDI-SVWHALLGA 674

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           C+ H + +LAE  A  +LE++   S    ++ LSNIYA+ G W++  KVR+ M +RGL+K
Sbjct: 675 CKSHNNVQLAERAAHHILELEP--SYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + G S I++ G ++ F ++D  HP+   I+  LE L  EM+ AG
Sbjct: 733 DRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAG 776



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 271/594 (45%), Gaps = 93/594 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F  +T    V W+++I  +  NN P +A   + +M  ++     +  T+ S+LKAC
Sbjct: 110 AEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN--IEPNRITFLSILKAC 167

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+ +H             V  +L+ MYS C                   +  
Sbjct: 168 NNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKC------------------GEIS 209

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           + C+VF  M  RNVV+W  I+    +  +  EA   +  ML+ GI P+ ++FV++  + +
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +         ++  + + G E   D+ VA++ I MY +      AR+IFD   +R+   W
Sbjct: 270 TPEALNRGRRIHSHISERGLE--TDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISW 327

Query: 298 NTMIGGYVQNNHP-VEAIELFVQVLE--LDEIVF-DDVTFLSALSAVSQLQELDLGQQLH 353
           + MI GY Q+ +   E+I+   Q+LE    E VF + VTF+S L A +    L+ G+Q+H
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387

Query: 354 AYII------------------------------------KNFVALPVI----------- 366
           A +                                     KN VA               
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLS 447

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               V + +  R+VVSWN MI+ + QNG   +   L+  M+ +GF  D VTV  +L A  
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            L   + GK  HA  ++ G+  +  + + LI MY+K G +  AR +F+K    +RD   W
Sbjct: 508 ALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDK--MSNRDTVAW 565

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAM+AGY Q+G   EA   F++ML+  V+PN +T+ +V+ AC+  G ++ G+++      
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREI------ 619

Query: 542 YLLDQNVFVGT-------SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + + Q  F  T        ++D+  ++G +  A      +P +  ++    +LG
Sbjct: 620 FRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLG 673



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 264/566 (46%), Gaps = 65/566 (11%)

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           K  R  EA++   ++ + G+  ++ ++  V    +    ++   +V+  L +LG E   D
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEI--D 90

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +++ +S I  Y++      A ++F     R+   W++MI  Y  NNHP +A + F ++ +
Sbjct: 91  IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
            + I  + +TFLS L A +    L+ G+++H  +    +   V V  A+I          
Sbjct: 151 AN-IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEIS 209

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     ER+VVSW  +I A  Q+   +E   L  +M + G   ++VT  +LL++ +
Sbjct: 210 VACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCN 269

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
                + G++ H+++   G+  + +  + LI MY K   ++ AR+IF++     RD  +W
Sbjct: 270 TPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDR--MSKRDVISW 327

Query: 482 NAMIAGYTQNGL-----LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           +AMIAGY Q+G      ++E F    +M    V PN VT  S+L AC   G +E G+Q+H
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387

Query: 537 ------GFSIRYLL-------------------------DQNVFVGTSLIDMYSKSGVIN 565
                 GF +   L                         ++NV   TS + MY K G ++
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLS 447

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF+++P +N V++  MI GY Q+G   +   L  SMK  G +PD +T + +L AC 
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
               ++ G ++      +  ++  T     +  M  + G+V EA     ++     V   
Sbjct: 508 ALAGLERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTV--A 564

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLE 711
           W ++L     HG    A  + K++L+
Sbjct: 565 WNAMLAGYGQHGDGLEAVDLFKRMLK 590



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 233/484 (48%), Gaps = 44/484 (9%)

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           EVW     G ++     EAI+L + +++   ++ +  T+   +   ++ +  + G+ +H 
Sbjct: 27  EVWRLCKAGRLR-----EAIQL-LGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHK 80

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
            + +  V + + + N++I                     RDVV+W++MI+A+  N    +
Sbjct: 81  QLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 140

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
                  M       + +T  ++L A +N    + G++ H  +   G+  +  + + LI 
Sbjct: 141 AFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALIT 200

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I  A ++F K    +R+  +W A+I    Q+  L EAF  + QML+  ++PN 
Sbjct: 201 MYSKCGEISVACEVFHK--MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNA 258

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT  S+L +CN    +  G+++H       L+ ++ V  +LI MY K   +  A  +F +
Sbjct: 259 VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDR 318

Query: 574 IPEKNSVTYTTMILGYGQHGMSER-----ALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           + +++ ++++ MI GY Q G  ++        L   M+  G+ P+ +TF+++L AC+  G
Sbjct: 319 MSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHG 378

Query: 629 LVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
            +++G QI  +L +  +++  S +    + +M  + G + EA +   ++  +  V   W 
Sbjct: 379 ALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMANKNVV--AWT 434

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           S L      G    AE   K   EM TRN +  ++++++  YA+ G+   V ++   M+ 
Sbjct: 435 SFLSMYIKCGDLSSAE---KVFSEMPTRNVVS-WNLMIAG-YAQNGDIVKVFELLSSMKA 489

Query: 748 RGLR 751
            G +
Sbjct: 490 EGFQ 493



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 161/333 (48%), Gaps = 23/333 (6%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY-----EAILLYSQMKKSSPYTS 104
           C+      AR++FD +++   + W+ +I G+  +         E   L  +M++   +  
Sbjct: 304 CKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP- 362

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            +  T+ S+L+AC     L  G+ +H    +      R +  ++ NMY+ C S  +AE V
Sbjct: 363 -NKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421

Query: 165 GLKYVE---VDYSKY--------DLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
             K      V ++ +        DL    KVF  M  RNVV+WN +++ Y +    V+  
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
                M   G +P  ++ + +  A  +L   +   +V+   VKLG E  +D  VA+S I 
Sbjct: 482 ELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLE--SDTVVATSLIG 539

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY++ G    AR +FD    R+T  WN M+ GY Q+   +EA++LF ++L+ + +  +++
Sbjct: 540 MYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLK-ERVSPNEI 598

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           T  + +SA S+   +  G+++   + ++F   P
Sbjct: 599 TLTAVISACSRAGLVQEGREIFRMMQEDFKMTP 631



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/510 (23%), Positives = 214/510 (41%), Gaps = 78/510 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +A ++F  +T    V W  II     +    EA  LY QM ++    S +  T+ S
Sbjct: 206 GEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAG--ISPNAVTFVS 263

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L +C     L  G+ +H H           V N+L+ MY  C S  +A           
Sbjct: 264 LLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAR---------- 313

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----ERYVEAVRQFRMMLRMGIRPSTI 227
                   ++FD M +R+V++W+ +++ Y ++     E   E  +    M R G+ P+ +
Sbjct: 314 --------EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKV 365

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA--------------------- 266
           +F+++  A ++ G  +    ++  L K+G E    L  A                     
Sbjct: 366 TFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425

Query: 267 --------SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
                   +S + MY + G    A K+F     RN   WN MI GY QN   V+  EL +
Sbjct: 426 ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFEL-L 484

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------ 366
             ++ +    D VT ++ L A   L  L+ G+ +HA  +K        VA  +I      
Sbjct: 485 SSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 544

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V + +  RD V+WN M++ + Q+G   E + L   M K+    + +T+TA++
Sbjct: 545 GQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVI 604

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDR 476
           SA S       G++    +          + Y  ++D+  ++G ++ A + F ++   + 
Sbjct: 605 SACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEE-FIQSMPCEP 663

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           D + W+A++     +  ++ A  A   +LE
Sbjct: 664 DISVWHALLGACKSHNNVQLAERAAHHILE 693


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/711 (33%), Positives = 374/711 (52%), Gaps = 55/711 (7%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S+L+ C +   L  G+  H   +      +  +   LL MY  C + LDA+         
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAK--------- 101

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     +F  +R      WN ++  +    ++  A+  +  ML  G  P   +F  
Sbjct: 102 ---------NIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPY 152

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A   L       VV+  +  +G E   D+FV SS I  Y+E GC   AR +FD    
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFEL--DVFVGSSLIKFYSENGCIHDARYLFDRMPS 210

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++  +WN M+ GYV+N     A  +F++ +   E   + VTF   LS  +    ++ G Q
Sbjct: 211 KDGVLWNVMLNGYVKNGDWDNATGVFME-MRRTETNPNSVTFACVLSVCASEIMINFGSQ 269

Query: 352 LHAYIIKNFVAL--PVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           LH  ++ + + +  PV    A+I+                     D+V    MIS +V N
Sbjct: 270 LHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 329

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G+++  L +   + ++    +SVT+ ++L A + L    +GK+ H ++L++G    G   
Sbjct: 330 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG---HGGSC 386

Query: 450 Y----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           Y    ++DMYAK G +  A Q F      D+D   WN+MI   +QNG  EEA   FRQM 
Sbjct: 387 YVGSAIMDMYAKCGRLDLAHQTFI--GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMG 444

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
                 + V+I++ L AC  +  +  GK++H F +R     ++F  ++LIDMYSK G ++
Sbjct: 445 MAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLD 504

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF  + EKN V++ ++I  YG HG  + +L+LF  M G GI+PD +TF+A++SAC 
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AG VDEG+  F  M +E  I    EHY C+ D+ GR G++ EA+  +  +    +   +
Sbjct: 565 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA-GV 623

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LLG+CRLHG+ ELAEV ++ L ++D +NS  GY+VLLSN++A  G WE+V K+R  M
Sbjct: 624 WGTLLGACRLHGNVELAEVASRNLFDLDPQNS--GYYVLLSNVHANAGQWESVLKIRSLM 681

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +ERG++K  GCSWIDV    + F + D+ HPQS +IY +L+ L +E+R  G
Sbjct: 682 KERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEG 732



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 287/614 (46%), Gaps = 57/614 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +F  +    +  WN +I GF        A+L Y +M      T  D YT+  V+KAC
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCG--TLPDKYTFPYVIKAC 157

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               ++ +G+ VH            FV +SL+  YS      DA                
Sbjct: 158 GGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARY-------------- 203

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  ++ V WN +++ YVK   +  A   F  M R    P++++F  V    +
Sbjct: 204 ----LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCA 259

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++GL+V  G E  + +    + I +Y +    + ARKIFD     +  V 
Sbjct: 260 SEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVC 319

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MI GYV N     A+E+F  +L+ + +  + VT  S L A + L  L LG++LH +I+
Sbjct: 320 TAMISGYVLNGMNNNALEIFRWLLQ-ERMRANSVTLASVLPACAGLAALTLGKELHGHIL 378

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           KN       V +A++                    ++D V WN+MI++  QNG  +E + 
Sbjct: 379 KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAID 438

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYA 456
           L  +M   G   D V+++A LSA +NL     GK+ HA+++R     +   ES LIDMY+
Sbjct: 439 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 498

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +  A ++F+  +  ++++ +WN++IA Y  +G L+++   F  ML   + P+ VT 
Sbjct: 499 KCGNLDLACRVFDTME--EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTF 556

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVINYAANVF 571
            +++ AC   G ++ G  +H F  R + ++   +        ++D++ ++G +N A  + 
Sbjct: 557 LAIISACGHAGQVDEG--IHYF--RCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMI 612

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC-SYAGL 629
             +P   ++  + T++     HG  E A    R++    ++P    +  +LS   + AG 
Sbjct: 613 NSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLF--DLDPQNSGYYVLLSNVHANAGQ 670

Query: 630 VDEGLQIFDLMQQE 643
            +  L+I  LM++ 
Sbjct: 671 WESVLKIRSLMKER 684



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 218/478 (45%), Gaps = 44/478 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G  H AR LFD +     V+WN ++ G+V N     A  ++ +M+++   T+ ++ T+
Sbjct: 194 ENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTE--TNPNSVTF 251

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + VL  CA    +  G  +H             V +S L M S   ++     +  K  +
Sbjct: 252 ACVLSVCASEIMINFGSQLH-----------GLVVSSGLEMDSPVANTFALIDIYFKCRD 300

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           V+ ++     K+FD     ++V    ++S YV       A+  FR +L+  +R ++++  
Sbjct: 301 VEMAR-----KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 355

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V PA + L        ++G ++K G  +    +V S+ + MYA+ G  D A + F    
Sbjct: 356 SVLPACAGLAALTLGKELHGHILKNG--HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGIS 413

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +++   WN+MI    QN  P EAI+LF Q + +    +D V+  +ALSA + L  L  G+
Sbjct: 414 DKDAVCWNSMITSCSQNGKPEEAIDLFRQ-MGMAGTKYDCVSISAALSACANLPALHYGK 472

Query: 351 QLHAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           ++HA++++                      + L   V + + E++ VSWN++I+A+  +G
Sbjct: 473 EIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHG 532

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
              + L L + M   G   D VT  A++SA  +    D G      +         ME Y
Sbjct: 533 RLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHY 592

Query: 451 --LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             ++D++ ++G +  A  +         D   W  ++     +G +E A VA R + +
Sbjct: 593 ACMVDLFGRAGRLNEAFGMINSMPF-SPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 124/229 (54%), Gaps = 5/229 (2%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           + ++L   ++      G+Q HA +L +GI + G + + L+ MY   G    A+ IF +  
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
               +   WN MI G+T  G  + A + + +ML     P+  T   V+ AC  + ++ LG
Sbjct: 109 LWCSE--PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166

Query: 533 KQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           + +H   I+++  + +VFVG+SLI  YS++G I+ A  +F ++P K+ V +  M+ GY +
Sbjct: 167 RVVHD-KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           +G  + A  +F  M+     P+++TF  VLS C+   +++ G Q+  L+
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLV 274



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 58/135 (42%)

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           HN       + S+L  C     +  G+Q H   +   +  N  +GT L+ MY   G    
Sbjct: 40  HNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLD 99

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A N+F ++    S  +  MI G+   G  + AL  +  M GCG  PD  TF  V+ AC  
Sbjct: 100 AKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGG 159

Query: 627 AGLVDEGLQIFDLMQ 641
              V  G  + D +Q
Sbjct: 160 LNSVALGRVVHDKIQ 174


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 245/810 (30%), Positives = 406/810 (50%), Gaps = 99/810 (12%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVC-NNLPYEAILLYSQM---KKSSPYTSCD 106
           + G      +LF  + +   VIWN ++ G     +   E + L+  M    ++ P    +
Sbjct: 86  KSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKP----N 141

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           + T + VL  CA  R    GK+VH + I+          N+L++MY+ C           
Sbjct: 142 SVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKC----------- 189

Query: 167 KYVEVDYSKYDLVCK----VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                      LVC      F+ +  ++VV+WN +++ + + +   EA + F  ML+  I
Sbjct: 190 ----------GLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPI 239

Query: 223 RPSTISFVNVFPALSSL---GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           +P+  +  ++ P  +SL     Y+    V+  +++   E V D+ V +S +  Y  +G  
Sbjct: 240 QPNYATIASILPVCASLEENAGYRYGKEVHCHVLRR-MELVEDVSVINSLMSFYLRIGQM 298

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           + A  +F N   R+   WN +I GY  N   ++A+ELF + + L+ I  D VT +S L A
Sbjct: 299 EKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPA 358

Query: 340 VSQLQELDLGQQLHAYIIK---------------------NFVALPVIVLNAVIERDVVS 378
            + +  L + + +H YII+                     N+    +     +  +D++S
Sbjct: 359 CAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLIS 418

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN ++ AF ++G +   + L++ M ++G   DS+T+  ++   + +      K+TH+Y +
Sbjct: 419 WNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSI 478

Query: 439 RHGIHFEG-----MESYLIDMYAKSGLIKTARQIF----EK------------------- 470
           R G+  +G     + + ++D YAK G +K A  IF    EK                   
Sbjct: 479 RFGL-LQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSH 537

Query: 471 -------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
                  N   + D  TWN M+  Y +N   ++A   F ++    + P++VTI S+LPAC
Sbjct: 538 DDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPAC 597

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             M ++ + +Q HG+ IR   + +V +  + IDMYSK G +  A  +F   P+K+ V +T
Sbjct: 598 AHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFT 656

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            M+ G+  HGM E AL +F  M   G++PD +   AVL ACS+AGLVDEG +IF+ +++ 
Sbjct: 657 AMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKV 716

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           +  QP+ E Y CV D+L R G++ +AY FV  +  E N   IWG+LLG+CR H   EL  
Sbjct: 717 HGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANA-NIWGTLLGACRTHHEVELGR 775

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           VVA  L ++++ N   G +V++SN+YA +  W+ V ++R+ MR R L+K  GCSWI+VG 
Sbjct: 776 VVADHLFKIESDN--IGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGR 833

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             N F + D  HPQ   IY  L  L   M+
Sbjct: 834 RKNVFIAGDSSHPQRSIIYRTLSTLDQLMK 863



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 175/732 (23%), Positives = 327/732 (44%), Gaps = 112/732 (15%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA+ L+ +  + S     +    +++LK+C     +R G  +H + ++      + +   
Sbjct: 20  EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           LLN+Y+             K   +DY       K+F  M +R+ V WN ++S     + +
Sbjct: 80  LLNLYA-------------KSGALDYCN-----KLFGEMDQRDPVIWNIVLSGLAGFQSH 121

Query: 208 -VEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
             E +R FR M  +   +P++++   V P  + L +  +   V+  ++K G E  +    
Sbjct: 122 EAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLE--SHTLA 178

Query: 266 ASSAIFMYAELG--CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            ++ I MYA+ G  C D A   F+    ++   WN +I G+ +N    EA +LF  +L+ 
Sbjct: 179 GNALISMYAKCGLVCSD-AYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLK- 236

Query: 324 DEIVFDDVTFLSALSAVSQLQE---LDLGQQLHAYIIKNF-VALPVIVLNAVI------- 372
             I  +  T  S L   + L+E      G+++H ++++   +   V V+N+++       
Sbjct: 237 GPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIG 296

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFMIDSVTVTALL 418
                         RD+VSWN +I+ +  NG   + L L  E +  +    DSVT+ ++L
Sbjct: 297 QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVL 356

Query: 419 SAASNLRNQDVGKQTHAYLLRH-GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
            A +++ N  V K  H Y++RH G+  +  + + L+  YAK    + A Q F       +
Sbjct: 357 PACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISR--K 414

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WNA++  +T++G           ML   + P+ +TI +++     +  ++  K+ H
Sbjct: 415 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 474

Query: 537 GFSIRYLL---DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILG---- 588
            +SIR+ L   D    +G  ++D Y+K G + YA N+F  + EK N VT  +MI G    
Sbjct: 475 SYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNS 534

Query: 589 ---------------------------YGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
                                      Y ++   ++ALSLF  ++G G++PD +T +++L
Sbjct: 535 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 594

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY---CCVADMLGRVGKVVEAYEFVKELGE 678
            AC++   V    Q        Y I+             DM  + G V  AY+    L  
Sbjct: 595 PACAHMASVHMLRQC-----HGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLF--LSS 647

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA-------E 731
               L ++ +++G   +HG  E A  +   +LE+  +   P + ++ + ++A       +
Sbjct: 648 PQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVK---PDHVIITAVLFACSHAGLVD 704

Query: 732 EGNWENVDKVRK 743
           EG W+  + + K
Sbjct: 705 EG-WKIFNSIEK 715



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 211/485 (43%), Gaps = 87/485 (17%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
            I S +S   + G+   A  LF ++     V WN II G+  N    +A+ L+S+   S 
Sbjct: 284 VINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF-ISL 342

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS----RFVYNSLLNMYSTCL 156
                D+ T  SVL ACA   NL++ K +H + IR   +P       V N+LL+ Y+ C 
Sbjct: 343 ETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIR---HPGLREDTSVGNALLSFYAKC- 398

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                          +Y++  L  + F  + R+++++WN I+  + ++      V     
Sbjct: 399 ---------------NYTQAAL--QTFLMISRKDLISWNAILDAFTESGCETHLVNLLHW 441

Query: 217 MLRMGIRPSTISFVNV---FPALSSLGDYK---SADVVYGLL----------------VK 254
           MLR GIRP +I+ + +   + A+S +   K   S  + +GLL                 K
Sbjct: 442 MLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAK 501

Query: 255 LGS-EYVNDLF----------VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
            G+ +Y  ++F            +S I  Y      D A  IF+   E +   WN M+  
Sbjct: 502 CGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRV 561

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           Y +N+ P +A+ LF + L+   +  D VT +S L A + +  + + +Q H Y+I+     
Sbjct: 562 YAENDFPDQALSLFHE-LQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR--ACF 618

Query: 364 PVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + LN                        ++D+V +  M+  F  +G+ +E L +   M
Sbjct: 619 NDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYM 678

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSG 459
            + G   D V +TA+L A S+    D G +    + + HG     ME Y  ++D+ A+ G
Sbjct: 679 LELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQ-PTMEQYACVVDLLARGG 737

Query: 460 LIKTA 464
            IK A
Sbjct: 738 RIKDA 742


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 251/787 (31%), Positives = 410/787 (52%), Gaps = 50/787 (6%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           + Q+HS +       +P + + L  +  + G    A+++F+ I     V W  +I G   
Sbjct: 179 VKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N L  EAILL+  M  S  + +   Y  SSVL A  + +   +G+ +HC  I+   +   
Sbjct: 239 NGLEEEAILLFCDMHASEIFPT--PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           +V N L+ +YS     + AE                  ++F TM  R+ V++N+++S  V
Sbjct: 297 YVCNGLVALYSRSRKLISAE------------------RIFSTMNSRDGVSYNSLISGLV 338

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +      A+  F  M R  ++P  I+  ++  A +S+G       ++   +K G     D
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS--AD 396

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           + +  S + +Y++    + A K F      N  +WN M+  Y Q ++  ++ E+F Q ++
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ-MQ 455

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
           ++ ++ +  T+ S L   + L  L LG+Q+H ++IK    L V V + +I          
Sbjct: 456 MEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     E DVVSW  MI+ +VQ+ +  E L L  EM+ +G   D++   + +SA +
Sbjct: 516 LALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA 575

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            +R    G+Q HA     G   +  + + LI +YA+ G I+ A   FEK   GD++  +W
Sbjct: 576 GIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK--IGDKNNISW 633

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N++++G  Q+G  EEA   F +ML      N+ T  S + A   + NI+ G+Q+H   ++
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
              D    V  SLI +Y+KSG I+ A   F  + E+N +++  MI GY QHG    AL L
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  MK CGI P+ +TFV VLSACS+ GLV EGL  F+ M + + + P +EHY CV D+LG
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLG 813

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G++  A E++KE+    + + IW +LL +C +H + E+ E  A  LLE++  +S    
Sbjct: 814 RAGQLDRAMEYIKEMPIPADAM-IWRTLLSACVIHKNIEIGERAAHHLLELEPEDSAT-- 870

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VL+SNIYA    W + D  RK M++RG++KE G SWI+V   V+ F + D+ HP +++I
Sbjct: 871 YVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQI 930

Query: 782 YEMLERL 788
           YE +  L
Sbjct: 931 YEYIGHL 937



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 275/569 (48%), Gaps = 42/569 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD    R+V +WN ++  +V  +   +    FR ML  GI P+  +F  V  A     
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV--- 170

Query: 241 DYKSADVVYGLLVKLGSE-----YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
                D+ +  + ++ S      + +   VA+  I +Y++ G  + A+K+F+    ++  
Sbjct: 171 ---GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  MI G  QN    EAI LF   +   EI        S LSA +++Q  +LG+QLH  
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCD-MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
           +IK        V N ++                     RD VS+N++IS  VQ G  D  
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L  +MQ+     D +TV +LLSA +++     G Q H++ ++ G+  +  +E  L+D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K   ++TA + F   ++   +   WN M+  Y Q   L ++F  FRQM    + PN  
Sbjct: 407 YSKCADVETAHKFFLTTET--ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQF 464

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  S+L  C  +G + LG+Q+H   I+     NV+V + LIDMY+K G +  A  +  ++
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL 524

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           PE + V++T MI GY QH M   AL LF  M+  GI+ D I F + +SAC+    + +G 
Sbjct: 525 PEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584

Query: 635 QIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           QI     Q Y      +      +  +  R G++ EAY   +++G++ N+   W SL+  
Sbjct: 585 QIH---AQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI--SWNSLVSG 639

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
               G+ E A  V  ++L  +   +M  Y
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 162/679 (23%), Positives = 312/679 (45%), Gaps = 52/679 (7%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           I S +    + G  H A ++FD  +  +   WN +I  FV     ++   L+ +M     
Sbjct: 96  IDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG- 154

Query: 102 YTSCDNYTYSSVLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
             + + YT++ VLKAC          K VH        + S  V N L+++YS       
Sbjct: 155 -ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYS------- 206

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                 K   ++ +K     KVF+ +  +++V W  ++S   +     EA+  F  M   
Sbjct: 207 ------KNGYIESAK-----KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            I P+     +V  A + +  ++  + ++ L++K G  + ++ +V +  + +Y+      
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG--FHSETYVCNGLVALYSRSRKLI 313

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A +IF     R+   +N++I G VQ      A+ELF + ++ D +  D +T  S LSA 
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK-MQRDCLKPDCITVASLLSAC 372

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           + +  L  G QLH++ IK  ++  +I+  ++++                     ++V WN
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWN 432

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            M+ A+ Q     +   +  +MQ +G + +  T  ++L   ++L    +G+Q H ++++ 
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G      + S LIDMYAK G +  A +I  +    + D  +W AMIAGY Q+ +  EA  
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRR--LPEDDVVSWTAMIAGYVQHDMFSEALQ 550

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +M    +  + +  AS + AC  +  +  G+Q+H  S       ++ +  +LI +Y+
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           + G I  A   F KI +KN++++ +++ G  Q G  E AL +F  M     E +  T+ +
Sbjct: 611 RCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS 670

Query: 620 VLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            +SA +    + +G QI  + ++  Y  +    +   +  +  + G + +A+    ++ E
Sbjct: 671 AISAAASLANIKQGQQIHSMVLKTGYDSEREVSN--SLISLYAKSGSISDAWREFNDMSE 728

Query: 679 EGNVLEIWGSLLGSCRLHG 697
             NV+  W +++     HG
Sbjct: 729 R-NVIS-WNAMITGYSQHG 745



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 51/121 (42%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M E  V  N      +L  C   G++    +LH    +   D    +  SL+D Y + G 
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
            + A  VF +   ++  ++  MI  +     + +   LFR M   GI P+  TF  VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 624 C 624
           C
Sbjct: 169 C 169


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/719 (32%), Positives = 390/719 (54%), Gaps = 53/719 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ T+SS+LK+C   R+ R+GK VH   I     P   +YNSL+++YS            
Sbjct: 61  DSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYS------------ 108

Query: 166 LKYVEVDYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
            K  ++  +K      VF+TM R   R+VV+W+ +++ +    R  +A++ F   L MG+
Sbjct: 109 -KSGDLTKAK-----DVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGL 162

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE-LGCFDF 281
            P+   +  V  A S+        V+ G L+K G  + +D+ V  S I M+ +    F+ 
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTG-HFESDVCVGCSLIDMFVKGENSFEN 221

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   E N   W  MI   +Q   P EAI  F+ ++ L     D  T  S  SA +
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACA 280

Query: 342 QLQELDLGQQLHAYIIKNFVALPV---------------------IVLNAVIERDVVSWN 380
           +L+ L LG+QLH++ I++ +A  V                      V + + +  V+SW 
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340

Query: 381 TMISAFVQN-GLDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            +I+ ++QN  L  E + L  EM  QG +  +  T ++   A  N+ +  VGKQ   +  
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400

Query: 439 RHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G+     + + +I M+ K   ++ AR  FE     +++  ++N  + G  +N   E A
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFES--LSEKNLVSYNTFLDGTCRNLDFEHA 458

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           F    ++ E  +  +  T AS+L     +G++  G+Q+H   ++  L  N  V  +LI M
Sbjct: 459 FELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISM 518

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G I+ A+ VF+ +  +N +++T+MI G+ +HG +ER L  F  M   G++P+ +T+
Sbjct: 519 YSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTY 578

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           VA+LSACS+ GLV EG + F+ M +++KI+P  EHY C+ D+L R G + +A+EF+  + 
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +VL +W + LG+CR+H ++EL ++ A+K+LE D     P  ++ LSNIYA  G WE 
Sbjct: 639 FQADVL-VWRTFLGACRVHSNTELGKLAARKILEFDPNE--PAAYIQLSNIYASAGKWEE 695

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             ++R++M+ER L KE GCSWI+VG  V++F   D  HP +H+IY+ L+ L  E++  G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCG 754



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 243/556 (43%), Gaps = 74/556 (13%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           S  DL+ +  D +R  + V +++++   ++   +         ++   I P ++ + ++ 
Sbjct: 47  SALDLMAR--DGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              S  GD   A  V+  + + G                                  +R+
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFG----------------------------------KRD 130

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+ M+  +  N    +AI+LFV+ LE+  +V +D  + + + A S    + +G+ + 
Sbjct: 131 VVSWSAMMACFGNNGREFDAIKLFVEFLEMG-LVPNDYCYTAVIRACSNSDFVGVGRVIL 189

Query: 354 AYIIKN-------FVALPVI---------------VLNAVIERDVVSWNTMISAFVQNGL 391
            +++K         V   +I               V + + E +VV+W  MI+  +Q G 
Sbjct: 190 GFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
             E +    +M   GF  D  T++++ SA + L N  +G+Q H++ +R G+  + +E  L
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLA-DDVECSL 308

Query: 452 IDMYAK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN-GLLEEAFVAFRQML-E 506
           +DMYAK    G +   R++F++    D    +W A+I GY QN  L  EA   F +M+ +
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMQ--DHSVMSWTALITGYMQNCNLATEAINLFSEMITQ 366

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            +V PN  T +S   AC  + +  +GKQ+ G + +  L  N  V  S+I M+ K   +  
Sbjct: 367 GHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMED 426

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A   F  + EKN V+Y T + G  ++   E A  L   +    +   A TF ++LS  + 
Sbjct: 427 ARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVAN 486

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLE 684
            G + +G QI     Q  K+  S     C A   M  + G +  A   V  L +  NV+ 
Sbjct: 487 VGSLRKGEQIH---SQVLKLGLSCNQPVCNALISMYSKCGSIDTASR-VFSLMDNRNVIS 542

Query: 685 IWGSLLGSCRLHGHSE 700
            W S++     HG +E
Sbjct: 543 -WTSMITGFAKHGFAE 557



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 218/480 (45%), Gaps = 51/480 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD ++    V W  +I   +    P EAI  +  M  S      D +T SSV  AC
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG--FESDKFTLSSVFSAC 279

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  NL +G+ +H   IR  S  +  V  SL++MY+ C  S D  +             D
Sbjct: 280 AELENLSLGRQLHSWAIR--SGLADDVECSLVDMYAKC--SADGSV-------------D 322

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMG-IRPSTISFVNVFPA 235
              KVFD M+  +V++W  +++ Y++      EA+  F  M+  G + P+  +F + F A
Sbjct: 323 DCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             ++ D +    V G   K G    + +  +  ++F+  +    + AR  F++  E+N  
Sbjct: 383 CGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDR--MEDARTAFESLSEKNLV 440

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            +NT + G  +N     A EL  ++ E  E+     TF S LS V+ +  L  G+Q+H+ 
Sbjct: 441 SYNTFLDGTCRNLDFEHAFELLSEIAE-RELGVSAFTFASLLSGVANVGSLRKGEQIHSQ 499

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           ++K  ++    V NA+I                     R+V+SW +MI+ F ++G  +  
Sbjct: 500 VLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERV 559

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LI 452
           L    +M K+G   + VT  A+LSA S++     G +  ++    H I    ME Y  ++
Sbjct: 560 LETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK-PKMEHYACMV 618

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+  ++GL+  A + F        D   W   +     +   E   +A R++LE +  PN
Sbjct: 619 DLLCRAGLLTDAFE-FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFD--PN 675



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 142/298 (47%), Gaps = 23/298 (7%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSC 105
           +K   +G     R++FD +   + + W  +I G++ N NL  EAI L+S+M  +  +   
Sbjct: 313 AKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEM-ITQGHVEP 371

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++T+SS  KAC    + R+GK V  H  +     +  V NS+++M+  C    DA    
Sbjct: 372 NHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDAR--- 428

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                            F+++  +N+V++NT +    +   +  A      +    +  S
Sbjct: 429 ---------------TAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVS 473

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++   ++++G  +  + ++  ++KLG        V ++ I MY++ G  D A ++
Sbjct: 474 AFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQP--VCNALISMYSKCGSIDTASRV 531

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           F     RN   W +MI G+ ++      +E F Q+ + + +  ++VT+++ LSA S +
Sbjct: 532 FSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTK-EGVKPNEVTYVAILSACSHV 588


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 259/809 (32%), Positives = 425/809 (52%), Gaps = 62/809 (7%)

Query: 6   VPLPLPPPPPTATPPPPQLPQIHSLSPPI---PKLKTPTIRSRLSKICQEGRPHLARQLF 62
           + L +P      +  P  L   H L   +   P+  T  I S      Q G    ++ +F
Sbjct: 1   MTLYMPLFRSCTSLRPLTLLHSHLLVTGLHHDPQASTKLIES----YSQIGCLQSSKLVF 56

Query: 63  DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYSSVLKACAETR 121
           ++   P + +W  +I   V +N   EAI LY++M  K  P +   ++ +SSVL+ACA   
Sbjct: 57  ETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPIS---DFIFSSVLRACAGFG 113

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEMVGLKYVEVDYSKYDLV 179
           NL +G+ VH   I+   +    V  SLL MY    CLS+                     
Sbjct: 114 NLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAK------------------- 154

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            KVFD M  R++V+W++I+S YV      E +  FR+++   +   +++ +++  A   L
Sbjct: 155 -KVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGEL 213

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G  + A  V+G +++   E    L    + + MY+    F  A +IF N   R+   W  
Sbjct: 214 GFLRLAKSVHGCIIRQRIETRGPL--NDALVLMYSRCDDFSSAERIFSNMFNRSIASWTA 271

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI  Y ++    +A+++FV++LE  ++  + VT ++ LS+ +    L  G+ +H Y +K+
Sbjct: 272 MISCYNRSRWFKQALQVFVEMLEF-KVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKH 330

Query: 360 ------------------FVALPVI--VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                             F  L     VL+ + +R+++SWN +IS +   GL  E L + 
Sbjct: 331 IDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIF 390

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
            +MQ+QG + DS ++++ +SA +N+    +G Q H Y ++  I  E +++ LIDMY+K G
Sbjct: 391 VQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQNSLIDMYSKCG 450

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A  IF++  S  +    WN+MI G++Q G   EA   F QM  + +  N VT  + 
Sbjct: 451 HVDLAYLIFDRIQS--KSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTA 508

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + AC+ MG++E GK LH   I Y + +++F+ T+LIDMY+K G +  A  VF  + E++ 
Sbjct: 509 IQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSV 568

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V+++ MI G G HG  + A+SLF  M    ++P+ ITF+ +LSACS++G V+EG   F+ 
Sbjct: 569 VSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNS 628

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+  ++++P+ EH+ C+ D+L R G + EAY  +  +        IWG+LL  CR+H   
Sbjct: 629 MKN-FEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEA-SIWGALLNGCRIHQRM 686

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           ++   + + LL+M T ++  GY+ LLSNIYAEEGNW+   KVR  M+  GL+K  G S I
Sbjct: 687 DMIRNIERDLLDMRTDDT--GYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTI 744

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           ++   V RF + D  H Q  +I   LE  
Sbjct: 745 ELDKKVYRFGAGDVSHWQVKEINTFLENF 773


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/722 (33%), Positives = 389/722 (53%), Gaps = 54/722 (7%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           N ++ + L      R+L+ GKA+H   I+  S+   ++ NSL+N+Y+ C    +A+ V  
Sbjct: 6   NRSFFTALLQYTHNRSLQKGKALHAQIIKS-SSSCVYIANSLVNLYAKCQRLREAKFV-- 62

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK--TERYVEAVRQFRMMLRMGIRP 224
                           F+ ++ ++VV+WN I++ Y +         +  F+ M      P
Sbjct: 63  ----------------FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAP 106

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  +F  VF A S+L D     + + + +K+ S    D+FV SS + MY + G    ARK
Sbjct: 107 NAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS--CRDVFVGSSLMNMYCKAGLTPEARK 164

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD   ERN+  W TMI GY       EA+ LF +++  +E   ++  F S LSA++  +
Sbjct: 165 VFDTMPERNSVSWATMISGYASQKLAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPE 223

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            ++ G+Q+H   +KN +   V V NA++                    +++ ++W+ MI+
Sbjct: 224 LVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMIT 283

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + Q+G  D+ L L   M   G      T   +++A S+L     GKQ H YLL+ G  F
Sbjct: 284 GYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG--F 341

Query: 445 EG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           E    + + L+DMYAK   I  AR+ F+     + D   W +MI GY QNG  E+A   +
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQ--EPDIVLWTSMIGGYVQNGENEDALSLY 399

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M    + PN +T+ASVL AC+ +  +E GKQ+H  +++Y     V +G++L  MY+K 
Sbjct: 400 GRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC 459

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +     VF ++P ++ +++  MI G  Q+G  + AL LF  M+  G +PD +TFV +L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACS+ GLV+ G   F +M  E+ + P  EHY C+ D+L R GK+ EA EF  E     +
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFT-ESATIDH 578

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + +W  +LG+CR + + EL     +KL+E+ ++ S    +VLLS+IY+  G WE+V++V
Sbjct: 579 GMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSA--YVLLSSIYSALGRWEDVERV 636

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
           R+ M+ RG+ KE GCSWI++   V+ F  KDQ HPQ   I+  L +L+ +M++ G +   
Sbjct: 637 RRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPAT 696

Query: 802 NS 803
           +S
Sbjct: 697 DS 698



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 261/540 (48%), Gaps = 47/540 (8%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           CQ  R   A+ +F+ I     V WN II G+  +     + ++    +  +  T+ + +T
Sbjct: 53  CQRLRE--AKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHT 110

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ V  A +   +   G+  H   I+  S    FV +SL+NMY  C + L  E       
Sbjct: 111 FAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY--CKAGLTPEAR----- 163

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      KVFDTM  RN V+W T++S Y   +   EA+  FR+M R     +   F
Sbjct: 164 -----------KVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  AL+      +   ++ + VK G   ++ + V ++ + MYA+ G  D A + F+  
Sbjct: 213 TSVLSALTLPELVNNGKQIHCIAVKNG--LLSIVSVGNALVTMYAKCGSLDDALQTFETS 270

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ++N+  W+ MI GY Q+    +A++LF   + L  I   + TF+  ++A S L     G
Sbjct: 271 SDKNSITWSAMITGYAQSGDSDKALKLF-SSMHLSGIRPSEFTFVGVINACSDLGAAWEG 329

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +Q+H Y++K      + V+ A++                    E D+V W +MI  +VQN
Sbjct: 330 KQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQN 389

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G +++ L L   M+ +G + + +T+ ++L A S+L   + GKQ HA  +++G   E  + 
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L  MYAK G +K    +F +  +  RD  +WNAMI+G +QNG  +EA   F +M    
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPA--RDVISWNAMISGLSQNGCGKEALELFEEMQLEG 507

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYA 567
             P+ VT  ++L AC+ MG +E G          + +D  V     ++D+ S++G +  A
Sbjct: 508 TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA 567



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 226/470 (48%), Gaps = 47/470 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S ++  C+ G    AR++FD++    +V W T+I G+    L  EA+ L+  M++     
Sbjct: 148 SLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGE 207

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             + + ++SVL A      +  GK +HC  ++        V N+L+ MY+ C S  DA  
Sbjct: 208 --NEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA-- 263

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            + F+T   +N + W+ +++ Y ++    +A++ F  M   GIR
Sbjct: 264 ----------------LQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIR 307

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  +FV V  A S LG       V+  L+KLG E  + ++V ++ + MYA+      AR
Sbjct: 308 PSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFE--SQIYVMTALVDMYAKCSSIVDAR 365

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K FD   E +  +W +MIGGYVQN    +A+ L+ + +E++ I+ +++T  S L A S L
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR-MEMEGILPNELTMASVLKACSSL 424

Query: 344 QELDLGQQLHAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMI 383
             L+ G+Q+HA  +K    L V                    +V   +  RDV+SWN MI
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   QNG   E L L  EMQ +G   D VT   +LSA S++   + G      +      
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGM 544

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
              +E Y  ++D+ +++G +K A + F ++ + D     W  +I G  +N
Sbjct: 545 DPRVEHYACMVDILSRAGKLKEAIE-FTESATIDHGMCLWR-IILGACRN 592


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/712 (32%), Positives = 391/712 (54%), Gaps = 49/712 (6%)

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
           +  +WN++       +LP EA+ +Y+ M +S+       + ++    A A       G  
Sbjct: 81  SAFLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLE 140

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           +H   +R       F  N+L+  Y+ C  + DA                   +VFD M  
Sbjct: 141 LHASALRRGHLADVFTGNTLVAFYAACGKACDAR------------------RVFDEMPE 182

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+VV+WN++VS ++    + +A R    M+R G   +  S V+V PA  +  + K    +
Sbjct: 183 RDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSI 242

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L VK+G   + +L  A++ + MY + G  + + ++FD  LE+N   WN+ IG ++   
Sbjct: 243 HALAVKVGLNTMVNL--ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAG 300

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              + + +F ++ E   ++   +T  S L A+ +L   DLG+++H Y IK  + L + V 
Sbjct: 301 FYGDVLRMFRKMSE-HNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 359

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           N++++                    R+VVSWN MI+  VQNG + E   LV +MQK G  
Sbjct: 360 NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGEC 419

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            +S+T+  +L A + + +  +GKQ HA+ +R G+ F+  + + LIDMY+K G +  AR I
Sbjct: 420 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 479

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           FE+++   +D  ++N +I GY+Q+    E+ + F+QM    +  + V+    L AC  + 
Sbjct: 480 FERSE---KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLS 536

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             + GK++H   +R LL  + F+  SL+D+Y+K G++  A+ +F KI +K+  ++ TMIL
Sbjct: 537 VFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMIL 596

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GYG HG  + A  LF  MKG G++ D ++++AVL+ACS+ GLVD+G + F  M  +  I+
Sbjct: 597 GYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIE 655

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P   HY C+ D+LGR G++ +  E ++++    N  ++WG+LLG+CR+HG+ ELA+  A+
Sbjct: 656 PQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANS-DVWGALLGACRIHGNIELAQWAAE 714

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            L E+   +S  GY+ L+ N+YAE G W   +K+RK M+ R ++K    SW+
Sbjct: 715 HLFELKPEHS--GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 764



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 275/570 (48%), Gaps = 52/570 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA-ILLYSQMKKSSPYTSCDNYTYS 111
           G+   AR++FD +     V WN+++  F+ N + ++A   L S M+   P       +  
Sbjct: 168 GKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVA---SLV 224

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           SV+ AC   +  + G ++H   ++   N    + N+L++MY              K+ +V
Sbjct: 225 SVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYG-------------KFGDV 271

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           + S      +VFD M  +N V+WN+ +  ++    Y + +R FR M    + P +I+  +
Sbjct: 272 EAS-----MQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSS 326

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           + PAL  LG +     V+G  +K   +   D+FVA+S + MYA+ G  + A  IF+   +
Sbjct: 327 LLPALVELGSFDLGREVHGYSIKRAMDL--DIFVANSLVDMYAKFGSLEKASTIFEQMKD 384

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN   WN MI   VQN    EA  L   + +  E   + +T ++ L A +++  L +G+Q
Sbjct: 385 RNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECP-NSITLVNVLPACARMASLKMGKQ 443

Query: 352 LHAYIIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLD 392
           +HA+ I+  +   + + NA+I                   E+D VS+NT+I  + Q+   
Sbjct: 444 IHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWC 503

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHFEGMES 449
            E L+L  +M+  G   D+V+    LSA +NL     GK+ H  L+R    G  F  + +
Sbjct: 504 FESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPF--LSN 561

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D+Y K G++ TA +IF  N    +D A+WN MI GY  +G ++ AF  F  M    +
Sbjct: 562 SLLDLYTKGGMLVTASKIF--NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 619

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             + V+  +VL AC+  G ++ GK+     +   ++        ++D+  ++G ++  A 
Sbjct: 620 DYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAE 679

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
           +   +P   NS  +  ++     HG  E A
Sbjct: 680 IIRDMPFPANSDVWGALLGACRIHGNIELA 709



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 223/469 (47%), Gaps = 48/469 (10%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q+FD +     V WN+ I  F+      + + ++ +M + +      + T SS+L A  E
Sbjct: 276 QVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPG--SITLSSLLPALVE 333

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +  +G+ VH + I+   +   FV NSL++MY+                   +   +  
Sbjct: 334 LGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAK------------------FGSLEKA 375

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +F+ M+ RNVV+WN +++  V+     EA R    M + G  P++I+ VNV PA + +
Sbjct: 376 STIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARM 435

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              K    ++   ++ G  +  DLF++++ I MY++ G    AR IF+   E++   +NT
Sbjct: 436 ASLKMGKQIHAWSIRRGLMF--DLFISNALIDMYSKCGQLSLARNIFERS-EKDDVSYNT 492

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I GY Q+    E++ LF Q+  +  I +D V+F+ ALSA + L     G+++H  +++ 
Sbjct: 493 LILGYSQSPWCFESLLLFKQMRSVG-IDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRR 551

Query: 360 FVA-LPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            ++  P +                   + N + ++DV SWNTMI  +  +G  D    L 
Sbjct: 552 LLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELF 611

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKS 458
             M+  G   D V+  A+L+A S+    D GK+  + ++   I  + M  + ++D+  ++
Sbjct: 612 ELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRA 671

Query: 459 G-LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           G L K A  I +     + D   W A++     +G +E A  A   + E
Sbjct: 672 GQLSKCAEIIRDMPFPANSD--VWGALLGACRIHGNIELAQWAAEHLFE 718


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 249/765 (32%), Positives = 411/765 (53%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A  LF  +     + WN +I G         A+L Y +M  S+   S D YT+  
Sbjct: 60  GRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSN--VSPDKYTFPY 117

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC    N+ +   VH        +   F  ++L+ +Y+      DA           
Sbjct: 118 VIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDAR---------- 167

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VFD +  R+ + WN ++  YVK+  +  A+  F  M       +++++  +
Sbjct: 168 --------RVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCI 219

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               ++ G++ +   ++GL++  G E+  D  VA++ + MY++ G   +ARK+F+   + 
Sbjct: 220 LSICATRGNFCAGTQLHGLVIGSGFEF--DPQVANTLVAMYSKCGNLLYARKLFNTMPQT 277

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  WN +I GYVQN    EA  LF  ++    +  D VTF S L ++ +   L   +++
Sbjct: 278 DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG-VKPDSVTFASFLPSILESGSLRHCKEV 336

Query: 353 HAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLD 392
           H+YI+++ V   V + +A+I+                     DV     MIS +V +GL+
Sbjct: 337 HSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLN 396

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYL 451
            + +     + ++G + +S+T+ ++L A + +     GK+ H ++L+  + +   + S +
Sbjct: 397 IDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAI 456

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            DMYAK G +  A + F +    DRD   WN+MI+ ++QNG  E A   FRQM       
Sbjct: 457 TDMYAKCGRLDLAYEFFRR--MSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKF 514

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + V+++S L A   +  +  GK++HG+ IR     + FV ++LIDMYSK G +  A  VF
Sbjct: 515 DSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVF 574

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +  KN V++ ++I  YG HG     L L+  M   GI PD +TF+ ++SAC +AGLVD
Sbjct: 575 NLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVD 634

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG+  F  M +EY I    EHY C+ D+ GR G+V EA++ +K +    +   +WG+LLG
Sbjct: 635 EGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDA-GVWGTLLG 693

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CRLHG+ ELA++ ++ LLE+D +NS  GY+VLLSN++A+ G W +V KVR  M+E+G++
Sbjct: 694 ACRLHGNVELAKLASRHLLELDPKNS--GYYVLLSNVHADAGEWASVLKVRSLMKEKGVQ 751

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  G SWIDV G  + F++ D  HP+S +IY +L+ L +E+R  G
Sbjct: 752 KIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQG 796



 Score = 40.4 bits (93), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 49/110 (44%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S+  AC+    ++  +Q+H   I   +       + ++ +Y   G    A N+F ++ 
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            + ++ +  MI G    G  + AL  +  M G  + PD  TF  V+ AC 
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACG 123


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 242/764 (31%), Positives = 400/764 (52%), Gaps = 81/764 (10%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EAI L   +K+     + +  TY  +++ CA+ R    GK VH            ++ NS
Sbjct: 61  EAIQLLGIIKQRGLLVNSN--TYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L+N YS                   +     V +VF  M  R+VV W+++++ Y      
Sbjct: 119 LINFYS------------------KFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHP 160

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
            +A   F  M    I P+ I+F+++  A ++    + A  ++ ++   G E   D+ VA+
Sbjct: 161 AKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGME--TDVAVAT 218

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + I MY++ G    A +IF    ERN   W  +I    Q+    EA EL+ ++L+   I 
Sbjct: 219 ALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG-IS 277

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------- 372
            + VTF+S L++ +  + L+ G+++H++I +  +   V+V NA+I               
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337

Query: 373 -----ERDVVSWNTMISAFVQNGLD-----DEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                +RDV+SW+ MI+ + Q+G       DE   L+  M+++G   + VT  ++L A S
Sbjct: 338 FDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACS 397

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS-------- 473
                + G+Q HA + + G   +  +++ + +MYAK G I  A Q+F K ++        
Sbjct: 398 VHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWAS 457

Query: 474 --------GD-------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
                   GD             R+  +WN MIAGY Q+G + + F     M      P+
Sbjct: 458 LLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPD 517

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VTI S+L AC  +  +E GK +H  +++  L+ +  V TSLI MYSK G +  A  VF 
Sbjct: 518 RVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFD 577

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           KI  +++V +  M+ GYGQHG+   A+ LF+ M    + P+ ITF AV+SAC  AGLV E
Sbjct: 578 KISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQE 637

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G +IF +MQ++++++P  +HY C+ D+LGR G++ EA EF++ +  E ++  +W +LLG+
Sbjct: 638 GREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDI-SVWHALLGA 696

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           C+ H + +LAE  A  +L ++  N+    +V LSNIYA+ G W++  KVRK M ++GL+K
Sbjct: 697 CKSHDNVQLAEWAAHHILRLEPSNA--SVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKK 754

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + G S I++ G ++ F ++D  HP+   I+  LE L  EM+ AG
Sbjct: 755 DRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAG 798



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/588 (26%), Positives = 271/588 (46%), Gaps = 85/588 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q+F  +T    V W+++I  +  NN P +A   + +MK ++     +  T+ S+LKAC  
Sbjct: 134 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN--IEPNRITFLSILKACNN 191

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L   + +H             V  +L+ MYS C                   +  L 
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKC------------------GEISLA 233

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
           C++F  M+ RNVV+W  I+    +  +  EA   +  ML+ GI P+ ++FV++  + ++ 
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   ++  + + G E   D+ VA++ I MY +  C   AR+ FD   +R+   W+ 
Sbjct: 294 EALNRGRRIHSHISERGLE--TDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSA 351

Query: 300 MIGGYVQNNHP-VEAIELFVQVLE--LDEIVF-DDVTFLSALSAVSQLQELDLGQQLHAY 355
           MI GY Q+ +   E+++   Q+LE    E VF + VTF+S L A S    L+ G+Q+HA 
Sbjct: 352 MIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAE 411

Query: 356 II------------------------------------KNFVALPVI------------- 366
           I                                     KN VA   +             
Sbjct: 412 ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSA 471

Query: 367 --VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             V + +  R+VVSWN MI+ + Q+G   +   L+  M+ +GF  D VT+ ++L A   L
Sbjct: 472 EKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGAL 531

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              + GK  HA  ++ G+  +  + + LI MY+K G +  AR +F+K    +RD   WNA
Sbjct: 532 SALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDK--ISNRDTVAWNA 589

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI--- 540
           M+AGY Q+G+  EA   F++ML+  V PN +T  +V+ AC   G ++ G+++  F I   
Sbjct: 590 MLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREI--FRIMQE 647

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
            + +         ++D+  ++G +  A     ++P +  ++    +LG
Sbjct: 648 DFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLG 695



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 263/566 (46%), Gaps = 65/566 (11%)

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           K  R  EA++   ++ + G+  ++ ++  +    + L  ++   +V+  L +LG     D
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELG--LAID 112

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +++ +S I  Y++ G      ++F     R+   W++MI  Y  NNHP +A + F ++ +
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
            + I  + +TFLS L A +    L+  +++H  +  + +   V V  A+I          
Sbjct: 173 AN-IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEIS 231

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     ER+VVSW  +I A  Q+   +E   L  +M + G   ++VT  +LL++ +
Sbjct: 232 LACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCN 291

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
                + G++ H+++   G+  +  + + LI MY K   I+ AR+ F++     RD  +W
Sbjct: 292 TPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDR--MSKRDVISW 349

Query: 482 NAMIAGYTQNGL-----LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           +AMIAGY Q+G      L+E F    +M    V PN VT  S+L AC+  G +E G+Q+H
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409

Query: 537 ------GF-SIRYLL------------------------DQNVFVGTSLIDMYSKSGVIN 565
                 GF S R L                         ++NV    SL+ MY K G + 
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLT 469

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF+++  +N V++  MI GY Q G   +   L  SMK  G +PD +T +++L AC 
Sbjct: 470 SAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACG 529

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
               ++ G ++      +  ++  T     +  M  + G+V EA     ++     V   
Sbjct: 530 ALSALERG-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTV--A 586

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLE 711
           W ++L     HG    A  + K++L+
Sbjct: 587 WNAMLAGYGQHGIGPEAVDLFKRMLK 612



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 233/483 (48%), Gaps = 42/483 (8%)

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           EVW     G ++     EAI+L + +++   ++ +  T+   +   ++L+  + G+ +H 
Sbjct: 49  EVWRLCKAGRLK-----EAIQL-LGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHK 102

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
            + +  +A+ + + N++I                     RDVV+W++MI+A+  N    +
Sbjct: 103 QLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 162

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
                  M+      + +T  ++L A +N    +  ++ H  +   G+  +  + + LI 
Sbjct: 163 AFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALIT 222

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I  A +IF+K    +R+  +W A+I    Q+  L EAF  + +ML+  ++PN 
Sbjct: 223 MYSKCGEISLACEIFQKMK--ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNA 280

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT  S+L +CN    +  G+++H       L+ +V V  +LI MY K   I  A   F +
Sbjct: 281 VTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDR 340

Query: 574 IPEKNSVTYTTMILGYGQHGMSER-----ALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           + +++ ++++ MI GY Q G  ++        L   M+  G+ P+ +TF+++L ACS  G
Sbjct: 341 MSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHG 400

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            +++G QI   + +    +        + +M  + G + EA +   ++ E  NV+  W S
Sbjct: 401 ALEQGRQIHAEISK-VGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM-ENKNVV-AWAS 457

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL      G    AE   K   EM TRN +  ++++++  YA+ G+   V ++   M+  
Sbjct: 458 LLTMYIKCGDLTSAE---KVFSEMSTRNVVS-WNLMIAG-YAQSGDIAKVFELLSSMKVE 512

Query: 749 GLR 751
           G +
Sbjct: 513 GFQ 515



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 128/567 (22%), Positives = 223/567 (39%), Gaps = 116/567 (20%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LA ++F  +     V W  II     +    EA  LY +M ++    S +  T+ S
Sbjct: 228 GEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAG--ISPNAVTFVS 285

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L +C     L  G+ +H H           V N+L+ MY  C    DA           
Sbjct: 286 LLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDAR---------- 335

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----ERYVEAVRQFRMMLRMGIRPSTI 227
                   + FD M +R+V++W+ +++ Y ++     E   E  +    M R G+ P+ +
Sbjct: 336 --------ETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKV 387

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA--------------------- 266
           +F+++  A S  G  +    ++  + K+G E    L  A                     
Sbjct: 388 TFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM 447

Query: 267 --------SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
                   +S + MY + G    A K+F     RN   WN MI GY Q+    +  EL +
Sbjct: 448 ENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFEL-L 506

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------ 366
             ++++    D VT +S L A   L  L+ G+ +HA  +K        VA  +I      
Sbjct: 507 SSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 566

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V + +  RD V+WN M++ + Q+G+  E + L   M K+    + +T TA++
Sbjct: 567 GEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVI 626

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR-- 476
           SA                                    ++GL++  R+IF       R  
Sbjct: 627 SAC----------------------------------GRAGLVQEGREIFRIMQEDFRMK 652

Query: 477 -DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
             +  +  M+    + G L+EA    ++M      P++    ++L AC    N++L  + 
Sbjct: 653 PGKQHYGCMVDLLGRAGRLQEAEEFIQRM---PCEPDISVWHALLGACKSHDNVQLA-EW 708

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSG 562
               I  L   N  V  +L ++Y+++G
Sbjct: 709 AAHHILRLEPSNASVYVTLSNIYAQAG 735


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/738 (32%), Positives = 373/738 (50%), Gaps = 88/738 (11%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN++I  +  N    + + L+  M   S +T  DNYT+  V KAC E  ++R G++ H  
Sbjct: 95  WNSLIRSYGDNGCANKCLYLFGLMHSLS-WTP-DNYTFPFVFKACGEISSVRCGESAHAL 152

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            +      + FV N+L+ MYS C S  DA                   KVFD M   +VV
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDAR------------------KVFDEMSVWDVV 194

Query: 193 AWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           +WN+I+  Y K  +   A+  F RM    G RP  I+ VNV P  +SLG +     ++  
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            V   SE + ++FV +  + MYA+ G  D A  +F N   ++   WN M+ GY Q     
Sbjct: 255 AVT--SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           +A+ LF                        ++QE                          
Sbjct: 313 DAVRLF-----------------------EKMQE------------------------EK 325

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I+ DVV+W+  IS + Q GL  E L +  +M   G   + VT+ ++LS  +++     GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385

Query: 432 QTHAYLLRHGIHF----EGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           + H Y +++ I       G E+     LIDMYAK   + TAR +F+     +RD  TW  
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           MI GY+Q+G   +A     +M E +    PN  TI+  L AC  +  + +GKQ+H +++R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505

Query: 542 YLLDQN---VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
               QN   +FV   LIDMY+K G I+ A  VF  +  KN VT+T+++ GYG HG  E A
Sbjct: 506 N--QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L +F  M+  G + D +T + VL ACS++G++D+G++ F+ M+  + + P  EHY C+ D
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G++  A   ++E+  E   + +W + L  CR+HG  EL E  A+K+ E+ + +  
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHD- 681

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G + LLSN+YA  G W++V ++R  MR +G++K  GCSW++       F   D+ HP +
Sbjct: 682 -GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740

Query: 779 HKIYEMLERLAMEMRNAG 796
            +IY++L      +++ G
Sbjct: 741 KEIYQVLLDHMQRIKDIG 758



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/466 (26%), Positives = 223/466 (47%), Gaps = 59/466 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLK 115
           AR++FD ++    V WN+II  +     P  A+ ++S+M        C  DN T  +VL 
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE---FGCRPDNITLVNVLP 237

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------LSSLDA-EMVG 165
            CA      +GK +HC  +      + FV N L++MY+ C          S++   ++V 
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297

Query: 166 LKYVEVDYS---KYDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
              +   YS   +++   ++F+ M+    + +VV W+  +S Y +     EA+   R ML
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL-----GSEYVNDLFVASSAIFMY 273
             GI+P+ ++ ++V    +S+G       ++   +K       + + ++  V +  I MY
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417

Query: 274 AELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDD 330
           A+    D AR +FD+    ER+   W  MIGGY Q+    +A+EL  ++ E D +   + 
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVIE---------------- 373
            T   AL A + L  L +G+Q+HAY ++N   A+P+ V N +I+                
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               ++ V+W ++++ +  +G  +E L +  EM++ GF +D VT+  +L A S+    D 
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597

Query: 430 GKQTHAYLLRHGIHF---EGMESY--LIDMYAKSGLIKTARQIFEK 470
           G +   Y  R    F    G E Y  L+D+  ++G +  A ++ E+
Sbjct: 598 GME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 173/386 (44%), Gaps = 49/386 (12%)

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           V  WN++I ++  NG  ++ L L   M    +  D+ T   +  A   + +   G+  HA
Sbjct: 92  VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151

Query: 436 YLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
             L  G I    + + L+ MY++   +  AR++F++      D  +WN++I  Y + G  
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV--WDVVSWNSIIESYAKLGKP 209

Query: 495 EEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           + A   F +M  E    P+ +T+ +VLP C  +G   LGKQLH F++   + QN+FVG  
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF----------- 602
           L+DMY+K G+++ A  VF+ +  K+ V++  M+ GY Q G  E A+ LF           
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329

Query: 603 ------------------------RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI-- 636
                                   R M   GI+P+ +T ++VLS C+  G +  G +I  
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 637 ------FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
                  DL +  +  +    +   + DM  +  KV  A      L  +   +  W  ++
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRN 716
           G    HG +  A  +  ++ E D + 
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQT 473



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 5/322 (1%)

Query: 431 KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           K  H  LL  GI    + S+LI  Y   G +  A  +  +    D     WN++I  Y  
Sbjct: 45  KLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG   +    F  M   + TP+  T   V  AC  + ++  G+  H  S+      NVFV
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CG 609
           G +L+ MYS+   ++ A  VF ++   + V++ ++I  Y + G  + AL +F  M    G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
             PD IT V VL  C+  G    G Q+         IQ      C V DM  + G + EA
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV-DMYAKCGMMDEA 283

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
                 +  +  V   W +++      G  E A  + +K+ E   +  +  +   +S  Y
Sbjct: 284 NTVFSNMSVKDVV--SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG-Y 340

Query: 730 AEEGNWENVDKVRKEMRERGLR 751
           A+ G       V ++M   G++
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIK 362



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 176/457 (38%), Gaps = 53/457 (11%)

Query: 51  QEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           Q GR   A +LF+ +     +   V W+  I G+    L YEA+ +  QM  S      +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG--IKPN 364

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRC-------FSNPSRFVYNSLLNMYSTCLSSL 159
             T  SVL  CA    L  GK +HC+ I+               V N L++MY+ C    
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC---- 420

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                          K D    +FD++  + R+VV W  ++  Y +     +A+     M
Sbjct: 421 --------------KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466

Query: 218 LR--MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                  RP+  +      A +SL   +    ++   ++     V  LFV++  I MYA+
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV-PLFVSNCLIDMYAK 525

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    AR +FDN + +N   W +++ GY  + +  EA+ +F ++  +     D VT L 
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLV 584

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G +    +   F   P              +  ++    + G  +  
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSP----------GPEHYACLVDLLGRAGRLNAA 634

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L+ EM  +      V   A LS        ++G+     +     + +G  + L ++Y
Sbjct: 635 LRLIEEMPMEP---PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691

Query: 456 AKSGLIKTA---RQIFEKNDSGDRDQATWNAMIAGYT 489
           A +G  K     R +        R   +W   I G T
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/639 (32%), Positives = 371/639 (58%), Gaps = 35/639 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F  M +R++  WNT++    + +++ E +  F  M R   +P   +      A   L 
Sbjct: 15  QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74

Query: 241 DYKSADVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +    ++++G +   V LGS    DL+V SS I+MY + G    A ++FD   + +   W
Sbjct: 75  EVNYGEMIHGFVKKDVTLGS----DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           ++M+ G+ +N  P +A+E F +++   ++  D VT ++ +SA ++L    LG+ +H ++I
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +   +  + ++N+++                    E+DV+SW+T+I+ +VQNG   E L+
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           +  +M   G   +  TV  +L A +   + + G++TH   +R G+  E  + + L+DMY 
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVT 515
           K    + A  +F +     +D  +W A+I+G+T NG+   +   F  ML E+N  P+ + 
Sbjct: 311 KCFSPEEAYAVFSRIPR--KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +  VL +C+ +G +E  K  H + I+Y  D N F+G SL+++YS+ G +  A+ VF  I 
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            K++V +T++I GYG HG   +AL  F  M K   ++P+ +TF+++LSACS+AGL+ EGL
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           +IF LM  +Y++ P+ EHY  + D+LGRVG +  A E  K +       +I G+LLG+CR
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM-PFSPTPQILGTLLGACR 547

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +H + E+AE VAKKL E+++ ++  GY++L+SN+Y  +G WENV+K+R  +++RG++K +
Sbjct: 548 IHQNGEMAETVAKKLFELESNHA--GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             S I++   V+RF + D+ HP+   +Y +L+ L + M+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 214/440 (48%), Gaps = 30/440 (6%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++F    +R+   WNT++    +     E +  F  +   DE   D+ T   AL A  
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACG 71

Query: 342 QLQELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSWN 380
           +L+E++ G+ +H ++ K+       +V   +I              + + + + D+V+W+
Sbjct: 72  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131

Query: 381 TMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           +M+S F +NG   + +     M        D VT+  L+SA + L N  +G+  H +++R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G   +  + + L++ YAKS   K A  +F+     ++D  +W+ +IA Y QNG   EA 
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKM--IAEKDVISWSTVIACYVQNGAAAEAL 249

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
           + F  M++    PNV T+  VL AC    ++E G++ H  +IR  L+  V V T+L+DMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITF 617
            K      A  VF++IP K+ V++  +I G+  +GM+ R++  F  M       PDAI  
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V VL +CS  G +++  + F     +Y    +      + ++  R G +  A +    + 
Sbjct: 370 VKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428

Query: 678 EEGNVLEIWGSLLGSCRLHG 697
            +  V  +W SL+    +HG
Sbjct: 429 LKDTV--VWTSLITGYGIHG 446



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 258/550 (46%), Gaps = 63/550 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+F  +T+ +   WNT++          E +  +S M +       DN+T    LKAC
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP--DNFTLPVALKAC 70

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            E R +  G+ +H    +  +  S  +V +SL+ MY  C   ++A               
Sbjct: 71  GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA--------------- 115

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPA 235
               ++FD + + ++V W+++VS + K     +AV  F RM++   + P  ++ + +  A
Sbjct: 116 ---LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA 172

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            + L + +    V+G +++ G  + NDL + +S +  YA+   F  A  +F    E++  
Sbjct: 173 CTKLSNSRLGRCVHGFVIRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+T+I  YVQN    EA+ +F  +++ D    +  T L  L A +   +L+ G++ H  
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL---- 391
            I+  +   V V  A+++                    +DVVSW  +IS F  NG+    
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRS 349

Query: 392 -DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGM 447
            ++  +ML+    +     D++ +  +L + S L   +  K  H+Y++++G     F G 
Sbjct: 350 IEEFSIMLLENNTRP----DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG- 404

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+++Y++ G +  A ++F  N    +D   W ++I GY  +G   +A   F  M++ 
Sbjct: 405 -ASLVELYSRCGSLGNASKVF--NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461

Query: 508 N-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVIN 565
           + V PN VT  S+L AC+  G I  G ++    +  Y L  N+     L+D+  + G ++
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521

Query: 566 YAANVFAKIP 575
            A  +  ++P
Sbjct: 522 TAIEITKRMP 531



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 203/455 (44%), Gaps = 72/455 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A ++FD + +P  V W++++ GF  N  PY+A+  + +M  +S  T  D  T  +
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP-DRVTLIT 168

Query: 113 VLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++ AC +  N R+G+ VH   I R FSN    V NSLLN Y+   +  +A          
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV-NSLLNCYAKSRAFKEA---------- 217

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     +F  +  ++V++W+T+++ YV+     EA+  F  M+  G  P+  + + 
Sbjct: 218 --------VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--DFARKIFDNC 289
           V  A ++  D +     + L ++ G E   ++ V+++ + MY  + CF  + A  +F   
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLE--TEVKVSTALVDMY--MKCFSPEEAYAVFSRI 325

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   W  +I G+  N     +IE F  +L  +    D +  +  L + S+L  L+  
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385

Query: 350 QQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQN 389
           +  H+Y+IK  F + P I                   V N +  +D V W ++I+ +  +
Sbjct: 386 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445

Query: 390 GLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF---- 444
           G   + L     M K   +  + VT  ++LSA S           HA L+  G+      
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGLRIFKLM 494

Query: 445 -------EGMESY--LIDMYAKSGLIKTARQIFEK 470
                    +E Y  L+D+  + G + TA +I ++
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 529


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 229/713 (32%), Positives = 388/713 (54%), Gaps = 49/713 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+Y Y  +L++C + ++L +GK VH H +R    P+ ++ N+LL +Y  C S  +A    
Sbjct: 43  DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEAR--- 99

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          ++FD    ++VV+WN ++S Y       EA   F +M + G+ P 
Sbjct: 100 ---------------RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPD 144

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +FV++  A SS         V+  +++ G    N+  V ++ I MYA+ G    AR++
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAG--LANNATVGNALISMYAKCGSVRDARRV 202

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    R+   W T+ G Y ++ +  E+++ +  +L+ + +    +T+++ LSA   L  
Sbjct: 203 FDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQ-EGVRPSRITYMNVLSACGSLAA 261

Query: 346 LDLGQQLHAYII---------------KNFVALPVI-----VLNAVIERDVVSWNTMISA 385
           L+ G+Q+HA I+               K ++    +     V   +  RDV++WNTMI  
Sbjct: 262 LEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGG 321

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            V +G  +E   + + M K+    D VT  A+LSA +       GK+ HA  ++ G+  +
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               + LI+MY+K+G +K ARQ+F++     RD  +W A++ GY   G + E+F  F++M
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPK--RDVVSWTALVGGYADCGQVVESFSTFKKM 439

Query: 505 LEHNVTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           L+  V  N +T   VL AC NP+  ++ GK++H   ++  +  ++ V  +L+ MY K G 
Sbjct: 440 LQQGVEANKITYMCVLKACSNPVA-LKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGS 498

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A  V   +  ++ VT+ T+I G  Q+G    AL  F  MK   + P+A TFV V+SA
Sbjct: 499 VEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSA 558

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           C    LV+EG + F  M+++Y I P+ +HY C+ D+L R G + EA + +  +  + +  
Sbjct: 559 CRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSA- 617

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +WG+LL +CR HG+ E+ E  A++ L+++ +N+  G +V LS IYA  G W +V K+RK
Sbjct: 618 AMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNA--GTYVSLSFIYAAAGMWRDVAKLRK 675

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M+ERG++KE G SWI+V G V+ F + DQ HP++ +IY  LE L  ++++ G
Sbjct: 676 LMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLG 728



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 169/614 (27%), Positives = 295/614 (48%), Gaps = 51/614 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + AR+LFD  +  + V WN +I G+    L  EA  L++ M++       D +T+ S
Sbjct: 93  GSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEG--LEPDKFTFVS 150

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC+    L  G+ VH   +      +  V N+L++MY+ C S  DA           
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDAR---------- 200

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VFD M  R+ V+W T+   Y ++    E+++ +  ML+ G+RPS I+++NV
Sbjct: 201 --------RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNV 252

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A  SL   +    ++  +V+  SE+ +D+ V+++   MY + G    AR++F+    R
Sbjct: 253 LSACGSLAALEKGKQIHAQIVE--SEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR 310

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNTMIGG V +    EA  +F ++L+ + +  D VT+L+ LSA ++   L  G+++
Sbjct: 311 DVIAWNTMIGGLVDSGQLEEAHGMFHRMLK-ECVAPDRVTYLAILSACARPGGLACGKEI 369

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA  +K+ +   V   NA+I                    +RDVVSW  ++  +   G  
Sbjct: 370 HARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQV 429

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E      +M +QG   + +T   +L A SN      GK+ HA +++ GI  +  + + L
Sbjct: 430 VESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANAL 489

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + MY K G ++ A ++ E   +  RD  TWN +I G  QNG   EA   F  M    + P
Sbjct: 490 MSMYFKCGSVEDAIRVSEGMST--RDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRP 547

Query: 512 NVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N  T  +V+ AC     +E G +Q       Y +         ++D+ +++G +  A +V
Sbjct: 548 NATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDV 607

Query: 571 FAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEP-DAITFVAVLSACSYAG 628
              +P K S   +  ++     HG  E  +    + +   +EP +A T+V++    + AG
Sbjct: 608 ILTMPFKPSAAMWGALLAACRAHGNVE--IGEQAAEQCLKLEPQNAGTYVSLSFIYAAAG 665

Query: 629 LVDEGLQIFDLMQQ 642
           +  +  ++  LM++
Sbjct: 666 MWRDVAKLRKLMKE 679


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/712 (32%), Positives = 399/712 (56%), Gaps = 47/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D YT+  V+K C    N+R+GK +    +    +   FV +SL+ +Y+      DA    
Sbjct: 9   DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDAR--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          + FD M  ++ V WN +++ YV+      A++ F+ M+    +P 
Sbjct: 66  ---------------RFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPD 110

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +++F  V     S    +    ++GL+V+ G ++V    V ++ + +Y++      ARK+
Sbjct: 111 SVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVP--LVGNTLVTVYSKGRQLGDARKL 168

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD   + +  VWN MIGGYVQN    +A  LF +++    I  D +TF S L ++++   
Sbjct: 169 FDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAG-IKPDSITFTSFLPSLAESSS 227

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISA 385
           L   +++H YI+++ V L V + +A+I+                     D+V +  MIS 
Sbjct: 228 LKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISG 287

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +V NG++ + L +   + ++  + +++T +++L A + L    +G++ H Y++++ +  +
Sbjct: 288 YVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEK 347

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + S +++MYAK G +  A  IF +     +D   WN++I  ++Q+G  EEA   FRQM
Sbjct: 348 CPVGSAIMNMYAKCGRLDLAHLIFGRISI--KDAICWNSIITSFSQDGKPEEAIYLFRQM 405

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               V  + VT+++ L AC  +  +  GK++HGF I+   + ++F  ++LI+MY+K G +
Sbjct: 406 GMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKL 465

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           N A  VF  + EKN V + ++I  YG HG    +L+LF +M   GI+PD ITF+ +LS+C
Sbjct: 466 NIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSC 525

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +AG V++G++ F  M +EY I    EHY C+AD+ GR G + EA+E +  +        
Sbjct: 526 GHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSM-PFPPAAS 584

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +WG+LLG+CR+HG+ ELAEV ++ LL+++ +NS  GY++LL+++ A+ G W +V K++  
Sbjct: 585 VWGTLLGACRVHGNVELAEVASRYLLDLEPKNS--GYYLLLTHVLADAGKWRSVHKIQHL 642

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M+ERG++K  GCSWI+V      F + D  HP+S +IY +L+ L +E+R  G
Sbjct: 643 MKERGVQKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVG 694



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 286/614 (46%), Gaps = 72/614 (11%)

Query: 32  PPIPKLKTPTIRSRLSKICQE------------------------GRPHLARQLFDSITR 67
           PP+ K  T     RL K+ Q+                        G    AR+ FD +  
Sbjct: 14  PPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMID 73

Query: 68  PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
              V+WN +I G+V       AI L+  M  S      D+ T++ VL        +  G+
Sbjct: 74  KDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKP--DSVTFACVLSISCSEAMVEYGR 131

Query: 128 AVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR 187
            +H   +R   +    V N+L+ +YS      DA                   K+FD M 
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDAR------------------KLFDMMP 173

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + ++V WN ++  YV+     +A   F  M+  GI+P +I+F +  P+L+     K    
Sbjct: 174 QIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKE 233

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++G +V+ G   + D+++ S+ I +Y +      A K+F+   + +  ++  MI GYV N
Sbjct: 234 IHGYIVRHG--VILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLN 291

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               +A+E+F  +L+  +++ + +TF S L A + L  + LG++LH YIIKN +     V
Sbjct: 292 GMNKDALEIFRWLLQ-KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPV 350

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            +A++                     +D + WN++I++F Q+G  +E + L  +M  +G 
Sbjct: 351 GSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGV 410

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQ 466
             D VTV+A LSA +N+     GK+ H ++++     +  + S LI+MYAK G +  AR 
Sbjct: 411 KYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARL 470

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F  N   ++++  WN++IA Y  +G L ++   F  MLE  + P+ +T  ++L +C   
Sbjct: 471 VF--NLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528

Query: 527 GNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           G +E G +     +  Y +   +     + D++ ++G ++ A  V   +P   + +    
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGT 588

Query: 586 ILGYGQ-HGMSERA 598
           +LG  + HG  E A
Sbjct: 589 LLGACRVHGNVELA 602



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 246/505 (48%), Gaps = 49/505 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRP-HLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H L         P + + L  +  +GR    AR+LFD + +   V+WN +I G+V N 
Sbjct: 132 QLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNG 191

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A +L+++M  +      D+ T++S L + AE+ +L+  K +H + +R       ++
Sbjct: 192 FMDDASMLFNEMISAG--IKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYL 249

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            ++L+++Y  C  ++                  + CK+F+   + ++V +  ++S YV  
Sbjct: 250 NSALIDLYFKCRDAV------------------MACKMFNLSTKFDIVIYTAMISGYVLN 291

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               +A+  FR +L+  + P+ ++F ++ PA + L   K    ++G ++K  +E      
Sbjct: 292 GMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIK--NELEEKCP 349

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V S+ + MYA+ G  D A  IF     ++   WN++I  + Q+  P EAI LF Q + ++
Sbjct: 350 VGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQ-MGME 408

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------NFVA------LP 364
            + +D VT  +ALSA + +  L  G+++H ++IK              N  A      + 
Sbjct: 409 GVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIA 468

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
            +V N + E++ V+WN++I+A+  +G   + L L + M ++G   D +T   +LS+  + 
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528

Query: 425 RNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
              + G +    +   +GI  + ME Y  + D++ ++G +  A ++           + W
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQ-MEHYACMADLFGRAGHLDEAFEVITSMPFPPA-ASVW 586

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLE 506
             ++     +G +E A VA R +L+
Sbjct: 587 GTLLGACRVHGNVELAEVASRYLLD 611



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 73/137 (53%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           ML   V P+  T   V+  C  + N+ LGK +    +    D ++FV +SLI +Y+ +G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I  A   F K+ +K+ V +  MI GY Q G S+ A+ LF+ M     +PD++TF  VLS 
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 624 CSYAGLVDEGLQIFDLM 640
                +V+ G Q+  L+
Sbjct: 121 SCSEAMVEYGRQLHGLV 137


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 239/771 (30%), Positives = 408/771 (52%), Gaps = 53/771 (6%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    AR +FD+++    V+WN ++ G+V      EA+LL  +M + +     ++ T
Sbjct: 99  CKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRP--NSRT 156

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             ++L AC     LR+G+ VH + +R          N + +      ++L    +G  Y+
Sbjct: 157 MVALLLACEGASELRLGRGVHGYCLR----------NGMFDSNPHVATAL----IGF-YL 201

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
             D     L+   FD M  RN+V+WN ++S Y     Y +A+  F  ML   ++   ++ 
Sbjct: 202 RFDMRVLPLL---FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 258

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +    A + LG  K    ++ L +K   E+V DL++ ++ + MY+  G  + + ++F++ 
Sbjct: 259 LVAVQACAELGSLKLGKQIHQLAIKF--EFVEDLYILNALLNMYSNNGSLESSHQLFESV 316

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDL 348
             R+  +WN+MI  Y       EA++LF++ ++ + +  D+ T +  LS   +L   L  
Sbjct: 317 PNRDAPLWNSMISAYAAFGCHEEAMDLFIR-MQSEGVKKDERTVVIMLSMCEELASGLLK 375

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQ 388
           G+ LHA++IK+ + +   + NA++                      D++SWNTMI A  +
Sbjct: 376 GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALAR 435

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGM 447
           N L  +   L   M++     +S T+ ++L+A  ++   D G+  H Y+++H I   + +
Sbjct: 436 NTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPL 495

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L DMY   G   TAR +FE     DRD  +WNAMIA Y +N    +A + F +M+  
Sbjct: 496 RTALADMYMNCGDEATARDLFE--GCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISE 553

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVIN 565
              PN VTI +VL +   +  +  G+ LH +  R  + L  ++ +  + I MY++ G + 
Sbjct: 554 -AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQ 612

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A N+F  +P++N +++  MI GYG +G    A+  F  M   G  P+ +TFV+VLSACS
Sbjct: 613 SAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACS 672

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++G ++ GLQ+F  M Q++ + P   HY C+ D+L R G + EA EF+  +  E +   +
Sbjct: 673 HSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDA-SV 731

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL SCR +  ++ A+ + +KL +++  N+  G +VLLSN+YA  G W  V ++R  +
Sbjct: 732 WRALLSSCRAYSDAKQAKTIFEKLDKLEPMNA--GNYVLLSNVYATAGLWLEVRRIRTWL 789

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +E+GLRK  G SWI V   V+ F++ D+ HPQS KIY  L  L   MR  G
Sbjct: 790 KEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETG 840



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 182/664 (27%), Positives = 314/664 (47%), Gaps = 55/664 (8%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN++I      NL  +  +L +  +  S     +N T   VLKACA    +  GK++H  
Sbjct: 21  WNSVIKHQA--NLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRS 78

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                      V  ++++ Y  C            +VE      D  C VFD M  R+VV
Sbjct: 79  IQGTDLMDDVRVGTAVVDFYCKC-----------GFVE------DARC-VFDAMSDRDVV 120

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
            WN +V  YV    Y EA+   R M R  +RP++ + V +  A     + +    V+G  
Sbjct: 121 LWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYC 180

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFA--RKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           ++ G  + ++  VA++ I  Y     FD      +FD  + RN   WN MI GY      
Sbjct: 181 LRNGM-FDSNPHVATALIGFYLR---FDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDY 236

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            +A+ELFVQ+L +DE+ FD VT L A+ A ++L  L LG+Q+H   IK      + +LNA
Sbjct: 237 FKALELFVQML-VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 295

Query: 371 VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++                     RD   WN+MISA+   G  +E + L   MQ +G   D
Sbjct: 296 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 355

Query: 411 SVTVTALLSAASNLRNQDV-GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF 468
             TV  +LS    L +  + GK  HA++++ G+  +  + + L+ MY +   +++ ++IF
Sbjct: 356 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 415

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++      D  +WN MI    +N L  +A   F +M E  + PN  TI S+L AC  +  
Sbjct: 416 DRMKG--VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTC 473

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++ G+ +HG+ +++ ++ N  + T+L DMY   G    A ++F   P+++ +++  MI  
Sbjct: 474 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIAS 533

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQ 647
           Y ++  + +AL LF  M     EP+++T + VLS+ ++   + +G  +   + ++ + + 
Sbjct: 534 YVKNNQAHKALLLFHRMIS-EAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLG 592

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
                      M  R G +  A    K L +  N++  W +++    ++G    A +   
Sbjct: 593 LDLSLANAFITMYARCGSLQSAENIFKTLPKR-NIIS-WNAMIAGYGMNGRGSDAMLAFS 650

Query: 708 KLLE 711
           ++LE
Sbjct: 651 QMLE 654



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 260/559 (46%), Gaps = 38/559 (6%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WN+++      +     +  +  M  +G+ P+  +   V  A ++    +    ++  + 
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
             G++ ++D+ V ++ +  Y + G  + AR +FD   +R+  +WN M+ GYV      EA
Sbjct: 81  --GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEA 138

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVI 366
           + L V+ +  + +  +  T ++ L A     EL LG+ +H Y ++N        VA  +I
Sbjct: 139 M-LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALI 197

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        + + ++ R++VSWN MIS +   G   + L L  +M       D VT
Sbjct: 198 GFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 257

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-----LIDMYAKSGLIKTARQIF 468
           +   + A + L +  +GKQ H    +  I FE +E       L++MY+ +G ++++ Q+F
Sbjct: 258 MLVAVQACAELGSLKLGKQIH----QLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 313

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E     +RD   WN+MI+ Y   G  EEA   F +M    V  +  T+  +L  C  + +
Sbjct: 314 ES--VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELAS 371

Query: 529 IEL-GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             L GK LH   I+  +  +  +G +L+ MY++   +     +F ++   + +++ TMIL
Sbjct: 372 GLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMIL 431

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
              ++ +  +A  LF  M+   I+P++ T +++L+AC     +D G  I   + + + I+
Sbjct: 432 ALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMK-HSIE 490

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
            +      +ADM    G    A +  +  G     L  W +++ S   +  +  A ++  
Sbjct: 491 INQPLRTALADMYMNCGDEATARDLFE--GCPDRDLISWNAMIASYVKNNQAHKALLLFH 548

Query: 708 KLLEMDTRNSMPGYHVLLS 726
           +++     NS+   +VL S
Sbjct: 549 RMISEAEPNSVTIINVLSS 567



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 238/524 (45%), Gaps = 57/524 (10%)

Query: 26  QIHSLSPPIPKLKTPTI-RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH L+     ++   I  + L+     G    + QLF+S+      +WN++I  +    
Sbjct: 276 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 335

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE-TRNLRIGKAVHCHFIRCFSNPSRF 143
              EA+ L+ +M+  S     D  T   +L  C E    L  GK++H H I+        
Sbjct: 336 CHEEAMDLFIRMQ--SEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 393

Query: 144 VYNSLLNMYS--TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           + N+LL+MY+   C+ S                    V K+FD M+  ++++WNT++   
Sbjct: 394 LGNALLSMYTELNCVES--------------------VQKIFDRMKGVDIISWNTMILAL 433

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            +     +A   F  M    I+P++ + +++  A   +        ++G ++K   E   
Sbjct: 434 ARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQ 493

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
            L  A +   MY   G    AR +F+ C +R+   WN MI  YV+NN   +A+ LF +++
Sbjct: 494 PLRTALAD--MYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI 551

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--FVALPVIVLNAVI------- 372
              E   + VT ++ LS+ + L  L  GQ LHAY+ +    + L + + NA I       
Sbjct: 552 S--EAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCG 609

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        +R+++SWN MI+ +  NG   + ++   +M + GF  + VT  ++LS
Sbjct: 610 SLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLS 669

Query: 420 AASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A S+    ++G Q  H+ +    +  E +  S ++D+ A+ G I  AR+ F  +   + D
Sbjct: 670 ACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE-FIDSMPIEPD 728

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASV 519
            + W A+++        ++A   F ++  LE     N V +++V
Sbjct: 729 ASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNV 772



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D   WN++I         +    A+ QM    V PN  T+  VL AC     +E GK +
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H       L  +V VGT+++D Y K G +  A  VF  + +++ V +  M+ GY   G  
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
           E A+ L R M    + P++ T VA+L AC  A
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGA 167


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 250/787 (31%), Positives = 409/787 (51%), Gaps = 50/787 (6%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           + Q+HS +       +P + + L  +  + G    A+++F+ I     V W  +I G   
Sbjct: 179 VKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQ 238

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N L  EAILL+  M  S  + +   Y  SSVL A  + +   +G+ +HC  I+   +   
Sbjct: 239 NGLEEEAILLFCDMHASEIFPT--PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSET 296

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           +V N L+ +YS     + AE                  ++F TM  R+ V++N+++S  V
Sbjct: 297 YVCNGLVALYSRSRKLISAE------------------RIFSTMNSRDGVSYNSLISGLV 338

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +      A+  F  M R  ++P  I+  ++  A +S+G       ++   +K G     D
Sbjct: 339 QQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS--AD 396

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           + +  S + +Y++    + A K F      N  +WN M+  Y Q ++  ++ E+F Q ++
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQ-MQ 455

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
           ++ ++ +  T+ S L   + L  L LG+Q+H ++IK    L V V + +I          
Sbjct: 456 MEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                     E DVVSW  MI+ +VQ+ +  E L L  EM+ +G   D++   + +SA +
Sbjct: 516 LALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACA 575

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            +R    G+Q HA     G   +  + + LI +YA+ G I+ A   FEK   GD++  +W
Sbjct: 576 GIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK--IGDKNNISW 633

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N++++G  Q+G  EEA   F +ML      N+ T  S + A   + NI+ G+Q+H   ++
Sbjct: 634 NSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLK 693

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
              D    V  SLI +Y+KSG I+ A   F  + E+N +++  MI GY QHG    AL L
Sbjct: 694 TGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRL 753

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  MK CGI P+ +TFV VLSACS+ GLV EGL  F+ M + + + P +EHY CV D+LG
Sbjct: 754 FEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLG 813

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G++  A E++KE+    + + IW +LL +C +H + E+ E  A  LLE++  +S    
Sbjct: 814 RAGQLDRAMEYIKEMPIPADAM-IWRTLLSACVIHKNIEIGERAAHHLLELEPEDSAT-- 870

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VL+SNIYA    W + D  RK M++ G++KE G SWI+V   V+ F + D+ HP +++I
Sbjct: 871 YVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQI 930

Query: 782 YEMLERL 788
           YE +  L
Sbjct: 931 YEYIGHL 937



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 275/569 (48%), Gaps = 42/569 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD    R+V +WN ++  +V  +   +    FR ML  GI P+  +F  V  A     
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV--- 170

Query: 241 DYKSADVVYGLLVKLGSE-----YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
                D+ +  + ++ S      + +   VA+  I +Y++ G  + A+K+F+    ++  
Sbjct: 171 ---GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  MI G  QN    EAI LF   +   EI        S LSA +++Q  +LG+QLH  
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCD-MHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
           +IK        V N ++                     RD VS+N++IS  VQ G  D  
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L  +MQ+     D +TV +LLSA +++     G Q H++ ++ G+  +  +E  L+D+
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDL 406

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K   ++TA + F   ++   +   WN M+  Y Q   L ++F  FRQM    + PN  
Sbjct: 407 YSKCADVETAHKFFLXTET--ENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQF 464

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  S+L  C  +G + LG+Q+H   I+     NV+V + LIDMY+K G +  A  +  ++
Sbjct: 465 TYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRL 524

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           PE + V++T MI GY QH M   AL LF  M+  GI+ D I F + +SAC+    + +G 
Sbjct: 525 PEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQ 584

Query: 635 QIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           QI     Q Y      +      +  +  R G++ EAY   +++G++ N+   W SL+  
Sbjct: 585 QIH---AQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI--SWNSLVSG 639

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
               G+ E A  V  ++L  +   +M  Y
Sbjct: 640 LAQSGYFEEALQVFVRMLRTEAEVNMFTY 668



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 162/679 (23%), Positives = 312/679 (45%), Gaps = 52/679 (7%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           I S +    + G  H A ++FD  +  +   WN +I  FV     ++   L+ +M     
Sbjct: 96  IDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEG- 154

Query: 102 YTSCDNYTYSSVLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
             + + YT++ VLKAC          K VH        + S  V N L+++YS       
Sbjct: 155 -ITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYS------- 206

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                 K   ++ +K     KVF+ +  +++V W  ++S   +     EA+  F  M   
Sbjct: 207 ------KNGYIESAK-----KVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHAS 255

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            I P+     +V  A + +  ++  + ++ L++K G  + ++ +V +  + +Y+      
Sbjct: 256 EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG--FHSETYVCNGLVALYSRSRKLI 313

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A +IF     R+   +N++I G VQ      A+ELF + ++ D +  D +T  S LSA 
Sbjct: 314 SAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTK-MQRDCLKPDCITVASLLSAC 372

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           + +  L  G QLH++ IK  ++  +I+  ++++                     ++V WN
Sbjct: 373 ASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWN 432

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            M+ A+ Q     +   +  +MQ +G + +  T  ++L   ++L    +G+Q H ++++ 
Sbjct: 433 VMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT 492

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G      + S LIDMYAK G +  A +I  +    + D  +W AMIAGY Q+ +  EA  
Sbjct: 493 GFQLNVYVCSVLIDMYAKYGQLALALRILRR--LPEDDVVSWTAMIAGYVQHDMFSEALQ 550

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +M    +  + +  AS + AC  +  +  G+Q+H  S       ++ +  +LI +Y+
Sbjct: 551 LFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYA 610

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           + G I  A   F KI +KN++++ +++ G  Q G  E AL +F  M     E +  T+ +
Sbjct: 611 RCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGS 670

Query: 620 VLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            +SA +    + +G QI  + ++  Y  +    +   +  +  + G + +A+    ++ E
Sbjct: 671 AISAAASLANIKQGQQIHSMVLKTGYDSEREVSN--SLISLYAKSGSISDAWREFNDMSE 728

Query: 679 EGNVLEIWGSLLGSCRLHG 697
             NV+  W +++     HG
Sbjct: 729 R-NVIS-WNAMITGYSQHG 745



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 51/121 (42%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M E  V  N      +L  C   G++    +LH    +   D    +  SL+D Y + G 
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
            + A  VF +   ++  ++  MI  +     + +   LFR M   GI P+  TF  VL A
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 624 C 624
           C
Sbjct: 169 C 169


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 246/761 (32%), Positives = 390/761 (51%), Gaps = 50/761 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A+ +FD +     + W  +I G        EA  L+ QM++       ++YTY S+L A 
Sbjct: 273  AQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIP--NSYTYVSILNAN 330

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            A    L   K VH H +         V N+L++MY+   S  DA +V             
Sbjct: 331  ASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV------------- 377

Query: 178  LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF--PA 235
                 FD M  R++ +W  ++    +  R  EA   F  M R G  P+  +++++    A
Sbjct: 378  -----FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432

Query: 236  LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            ++S    +   VV+    + G  +++DL + ++ I MYA+ G  D AR +FD   +R+  
Sbjct: 433  IASTSALEWVKVVHKHAEEAG--FISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVI 490

Query: 296  VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
             WN M+GG  QN    EA  +F+Q ++ + +V D  T+LS L+       L+   ++H +
Sbjct: 491  SWNAMMGGLAQNGCGHEAFTVFLQ-MQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKH 549

Query: 356  IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
             ++  +     V +A I                     R V +WN MI    Q     E 
Sbjct: 550  AVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREA 609

Query: 396  LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
            L L  +MQ++GF+ D+ T   +LSA  +    +  K+ H++    G+    + + L+  Y
Sbjct: 610  LSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTY 669

Query: 456  AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            +K G +K A+Q+F+  D  +R+  TW  MI G  Q+G   +AF  F QML   + P+  T
Sbjct: 670  SKCGNVKYAKQVFD--DMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATT 727

Query: 516  IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
              S+L AC   G +E  K++H  ++   L  ++ VG +L+ MY+K G I+ A +VF  + 
Sbjct: 728  YVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV 787

Query: 576  EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            E++  ++T MI G  QHG    AL  F  MK  G +P+  ++VAVL+ACS+AGLVDEG +
Sbjct: 788  ERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRR 847

Query: 636  IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             F  M Q+Y I+P+ EHY C+ D+LGR G + EA  F+  +  E +    WG+LLG+C  
Sbjct: 848  QFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP-WGALLGACVT 906

Query: 696  HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            +G+ E+AE  AK+ L++  +++    +VLLSNIYA  G WE    VR  M+ +G+RKE G
Sbjct: 907  YGNLEMAEFAAKERLKLKPKSAST--YVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPG 964

Query: 756  CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             SWI+V   ++ F   D  HP+S +IY  L  L   ++  G
Sbjct: 965  RSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKG 1005



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 187/602 (31%), Positives = 287/602 (47%), Gaps = 49/602 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   ARQ+FD + +    IW T+I G+       +A+ +Y +M++       +  TY S
Sbjct: 167 GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQP--NEITYLS 224

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKAC    NL+ GK +H H I+        V  +L+NMY  C S  DA++         
Sbjct: 225 ILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQL--------- 275

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +FD M  RNV++W  ++       R  EA   F  M R G  P++ ++V++
Sbjct: 276 ---------IFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSI 326

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +S G  +    V+   V  G     DL V ++ + MYA+ G  D AR +FD   ER
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAG--LALDLRVGNALVHMYAKSGSIDDARVVFDGMTER 384

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL-----SALSAVSQLQ--- 344
           +   W  MIGG  Q+    EA  LF+Q ++ +  + +  T+L     SA+++ S L+   
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQ-MQRNGCLPNLTTYLSILNASAIASTSALEWVK 443

Query: 345 -------------ELDLGQQL-HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
                        +L +G  L H Y     +    +V + + +RDV+SWN M+    QNG
Sbjct: 444 VVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNG 503

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              E   +  +MQ++G + DS T  +LL+   +    +   + H + +  G+  +  + S
Sbjct: 504 CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGS 563

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
             I MY + G I  AR +F+K     R   TWNAMI G  Q     EA   F QM     
Sbjct: 564 AFIHMYIRCGSIDDARLLFDKLSV--RHVTTWNAMIGGAAQQRCGREALSLFLQMQREGF 621

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+  T  ++L A      +E  K++H  +    L  ++ VG +L+  YSK G + YA  
Sbjct: 622 IPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQ 680

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  + E+N  T+T MI G  QHG    A S F  M   GI PDA T+V++LSAC+  G 
Sbjct: 681 VFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGA 740

Query: 630 VD 631
           ++
Sbjct: 741 LE 742



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 260/541 (48%), Gaps = 46/541 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+++Y ++L+ C +  ++ + K VH   I+     + +V N LL +Y  C          
Sbjct: 117 DSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRC---------- 166

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    +     +VFD + ++N+  W T++  Y +     +A+R +  M +   +P+
Sbjct: 167 --------GRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+++++  A     + K    ++  +++ G  + +D+ V ++ + MY + G  + A+ I
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSG--FQSDVRVETALVNMYVKCGSIEDAQLI 276

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD  +ERN   W  MIGG        EA  LF+Q ++ +  + +  T++S L+A +    
Sbjct: 277 FDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQ-MQREGFIPNSYTYVSILNANASAGA 335

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           L+  +++H++ +   +AL + V NA++                    ERD+ SW  MI  
Sbjct: 336 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL--SAASNLRNQDVGKQTHAYLLRHG-I 442
             Q+G   E   L  +MQ+ G + +  T  ++L  SA ++    +  K  H +    G I
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
               + + LI MYAK G I  AR +F+     DRD  +WNAM+ G  QNG   EAF  F 
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFD--GMCDRDVISWNAMMGGLAQNGCGHEAFTVFL 513

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           QM +  + P+  T  S+L        +E   ++H  ++   L  +  VG++ I MY + G
Sbjct: 514 QMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG 573

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I+ A  +F K+  ++  T+  MI G  Q      ALSLF  M+  G  PDA TF+ +LS
Sbjct: 574 SIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILS 633

Query: 623 A 623
           A
Sbjct: 634 A 634



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 227/437 (51%), Gaps = 28/437 (6%)

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           +AV   ++ ++ GI   + S+VN+        D   A  V+  ++K G E   +L+VA+ 
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGME--QNLYVANK 158

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + +Y   G    AR++FD  L++N  +W TMIGGY +  H  +A+ ++ ++ + +    
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQ-ECGQP 217

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV--------------------IVL 368
           +++T+LS L A      L  G+++HA+II++     V                    ++ 
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
           + ++ER+V+SW  MI      G   E   L  +MQ++GF+ +S T  ++L+A ++    +
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
             K+ H++ +  G+  +  + + L+ MYAKSG I  AR +F+     +RD  +W  MI G
Sbjct: 338 WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT--ERDIFSWTVMIGG 395

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL--PACNPMGNIELGKQLHGFSIRYLLD 545
             Q+G  +EAF  F QM  +   PN+ T  S+L   A      +E  K +H  +      
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            ++ +G +LI MY+K G I+ A  VF  + +++ +++  M+ G  Q+G    A ++F  M
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQM 515

Query: 606 KGCGIEPDAITFVAVLS 622
           +  G+ PD+ T++++L+
Sbjct: 516 QQEGLVPDSTTYLSLLN 532



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 127/231 (54%), Gaps = 7/231 (3%)

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDV--GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           +QG  IDS +   +L     L+ +D+   KQ H  +++ G+     + + L+ +Y + G 
Sbjct: 111 QQGIAIDSFSYVNILQRC--LKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGR 168

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           ++ ARQ+F+K     ++   W  MI GY + G  E+A   + +M +    PN +T  S+L
Sbjct: 169 LQCARQVFDK--LLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSIL 226

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC    N++ GK++H   I+     +V V T+L++MY K G I  A  +F K+ E+N +
Sbjct: 227 KACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVI 286

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           ++T MI G   +G  + A  LF  M+  G  P++ T+V++L+A + AG ++
Sbjct: 287 SWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 12/260 (4%)

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           ++A    +  ++  +  +  +  ++L  C    +I L KQ+H   I+  ++QN++V   L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CGIEPD 613
           + +Y + G +  A  VF K+ +KN   +TTMI GY ++G +E A+ ++  M+  CG +P+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPN 218

Query: 614 AITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
            IT++++L AC     +  G +I   ++Q  ++     E    + +M  + G + +A   
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSIEDAQLI 276

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS--NIYA 730
             ++ E  NV+  W  ++G    +G  + A       L+M     +P  +  +S  N  A
Sbjct: 277 FDKMVER-NVIS-WTVMIGGLAHYGRGQEA---FHLFLQMQREGFIPNSYTYVSILNANA 331

Query: 731 EEGNWENVDKVRKEMRERGL 750
             G  E V +V       GL
Sbjct: 332 SAGALEWVKEVHSHAVNAGL 351


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 238/738 (32%), Positives = 369/738 (50%), Gaps = 88/738 (11%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN++I  +  N    + +  +  M   S   + DNYT+  V KAC E  ++R G + H  
Sbjct: 95  WNSLIRSYGNNGRANKCLSSFCLMHSLS--WTPDNYTFPFVFKACGEISSVRCGDSSHAL 152

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                   + FV N+L+ MYS C S  DA                   KVFD M   +VV
Sbjct: 153 SRVTGFMSNVFVGNALVAMYSRCGSLSDAR------------------KVFDEMPVWDVV 194

Query: 193 AWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           +WN+I+  Y K  +   A+  F +M    G RP  I+ VNV P  +S+G        +G 
Sbjct: 195 SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGF 254

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            V   SE + ++FV +  + MYA+ G  D A  +F N   ++   WN M+ GY Q     
Sbjct: 255 AVT--SEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           +A+ LF                        Q+QE                          
Sbjct: 313 DAVRLF-----------------------EQMQE------------------------EK 325

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I+ DVV+W+  IS + Q GL  E L +  +M   G   + VT+ ++LS  +++     GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385

Query: 432 QTHAYLLRHGIHF----EGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           + H Y +++ +       G E+     LIDMYAK   +  AR +F+     +RD  TW  
Sbjct: 386 EIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTV 445

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           MI GY+Q+G   +A     +M E +    PN  TI+  L AC  +  + +GKQ+H +++R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALR 505

Query: 542 YLLDQN---VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
               QN   +FV   LIDMY+K G I  A  VF  + EKN VT+T+++ GYG HG  E A
Sbjct: 506 N--QQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEA 563

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L +F  M+  G + D +T + VL ACS++G++D+G++ F+ M+ ++ + P  EHY C+ D
Sbjct: 564 LGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVD 623

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G++  A   ++E+  E   + +W +LL  CR+HG  EL E  AKK+ E+ + N  
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPV-VWVALLSCCRIHGKVELGEYAAKKITELASNND- 681

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G + LLSN+YA  G W++V ++R  MR +G++K  GCSW++       F   D+ HP +
Sbjct: 682 -GSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740

Query: 779 HKIYEMLERLAMEMRNAG 796
            +IY++L      +++ G
Sbjct: 741 KEIYQVLSDHMQRIKDIG 758



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 235/500 (47%), Gaps = 56/500 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V WN+II  +     P  A+ ++S+M     +   D+ T  +VL  C
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRP-DDITLVNVLPPC 239

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS---------TCLSSLDA-EMVGLK 167
           A      +GK  H   +      + FV N L++MY+         T  S++   ++V   
Sbjct: 240 ASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWN 299

Query: 168 YVEVDYS---KYDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            +   YS   +++   ++F+ M+    + +VV W+  +S Y +     EA+   R ML  
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE-----YVNDLFVASSAIFMYAE 275
           GI+P+ ++ ++V    +S+G       ++   +K   +     + ++  V +  I MYA+
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAK 419

Query: 276 LGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDDVT 332
               D AR +FD+    ER+   W  MIGGY Q+    +A+EL  ++ E D +   +  T
Sbjct: 420 CKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVI------------------- 372
              AL A + L  L +G+Q+HAY ++N   A+P+ V N +I                   
Sbjct: 480 ISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM 539

Query: 373 -ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            E++ V+W ++++ +  +G  +E L +  EM++ GF +D VT+  +L A S+    D G 
Sbjct: 540 MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599

Query: 432 QTHAYLLRHGIHF---EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           +   Y  R    F    G E Y  L+D+  ++G +  A ++ E+    +     W A+++
Sbjct: 600 E---YFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPM-EPPPVVWVALLS 655

Query: 487 GYTQNGLLEEAFVAFRQMLE 506
               +G +E    A +++ E
Sbjct: 656 CCRIHGKVELGEYAAKKITE 675



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 150/300 (50%), Gaps = 9/300 (3%)

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           V  WN++I ++  NG  ++ L     M    +  D+ T   +  A   + +   G  +HA
Sbjct: 92  VYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA 151

Query: 436 YLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
                G     F G  + L+ MY++ G +  AR++F++      D  +WN++I  Y + G
Sbjct: 152 LSRVTGFMSNVFVG--NALVAMYSRCGSLSDARKVFDEMPV--WDVVSWNSIIESYAKLG 207

Query: 493 LLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
             + A   F +M  E    P+ +T+ +VLP C  +G   LGKQ HGF++   + QN+FVG
Sbjct: 208 KPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVG 267

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             L+DMY+K G+++ A  VF+ +P K+ V++  M+ GY Q G  E A+ LF  M+   I+
Sbjct: 268 NCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIK 327

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
            D +T+ A +S  +  GL  E L +   M     I+P+      V      VG ++   E
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPNEVTLISVLSGCASVGALMHGKE 386



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 105/240 (43%), Gaps = 2/240 (0%)

Query: 431 KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           K  H  LL  GI    + S+LI  Y   G +  A  +  +    D     WN++I  Y  
Sbjct: 45  KLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGN 104

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG   +   +F  M   + TP+  T   V  AC  + ++  G   H  S       NVFV
Sbjct: 105 NGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFV 164

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CG 609
           G +L+ MYS+ G ++ A  VF ++P  + V++ ++I  Y + G  + AL +F  M    G
Sbjct: 165 GNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFG 224

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
             PD IT V VL  C+  G    G Q          IQ      C V DM  + G + EA
Sbjct: 225 FRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLV-DMYAKFGMMDEA 283



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 181/457 (39%), Gaps = 53/457 (11%)

Query: 51  QEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           Q GR   A +LF+ +     +   V W+  I G+    L YEA+ +  QM  S      +
Sbjct: 307 QIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG--IKPN 364

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-------FVYNSLLNMYSTCLSSL 159
             T  SVL  CA    L  GK +HC+ I+   +  +        V N L++MY+ C    
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKC---- 420

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                          K D+   +FD++  + R+VV W  ++  Y +     +A+     M
Sbjct: 421 --------------KKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466

Query: 218 LR--MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                  RP+  +      A +SL        ++   ++     V  LFV++  I MYA+
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV-PLFVSNCLIDMYAK 525

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    AR +FDN +E+N   W +++ GY  + +  EA+ +F ++  +     D VT L 
Sbjct: 526 CGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIG-FKLDGVTLLV 584

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G +    +  +F   P              +  ++    + G  +  
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTDFGVSP----------GPEHYACLVDLLGRAGRLNAA 634

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L+ EM  +      V   ALLS        ++G+     +     + +G  + L +MY
Sbjct: 635 LRLIEEMPMEP---PPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMY 691

Query: 456 AKSGLIKTA---RQIFEKNDSGDRDQATWNAMIAGYT 489
           A +G  K     R +        R   +W   I G T
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTT 728


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/638 (34%), Positives = 361/638 (56%), Gaps = 34/638 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD ++    + WN +++   K+  +  ++  F+ M+  G+   + +F  V  + SSL   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
              + ++G ++K G    N   V +S +  Y +    D ARK+FD   ER+   WN++I 
Sbjct: 61  HGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 118

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GYV N    + + +FVQ+L +  I  D  T +S  +  +  + + LG+ +H+  +K   +
Sbjct: 119 GYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 177

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
                 N ++                    +R VVS+ +MI+ + + GL  E + L  EM
Sbjct: 178 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 237

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +++G   D  TVTA+L+  +  R  D GK+ H ++  + + F+  + + L+DMYAK G +
Sbjct: 238 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVL 520
           + A  +F  ++   +D  +WN +I GY++N    EA   F  +LE    +P+  T+A VL
Sbjct: 298 QEAELVF--SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 355

Query: 521 PACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           PAC  +   + G+++HG+ +R  Y  D++  V  SL+DMY+K G +  A  +F  I  K+
Sbjct: 356 PACASLSAFDKGREIHGYIMRNGYFSDRH--VANSLVDMYAKCGALLLAHMLFDDIASKD 413

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V++T MI GYG HG  + A++LF  M+  GIE D I+FV++L ACS++GLVDEG + F+
Sbjct: 414 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 473

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           +M+ E KI+P+ EHY C+ DML R G +++AY F++ +    +   IWG+LL  CR+H  
Sbjct: 474 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT-IWGALLCGCRIHHD 532

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            +LAE VA+K+ E++  N+  GY+VL++NIYAE   WE V ++RK + +RGLRK  GCSW
Sbjct: 533 VKLAEKVAEKVFELEPENT--GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSW 590

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           I++ G VN F + D  +P++  I   L ++   M   G
Sbjct: 591 IEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 628



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 154/645 (23%), Positives = 291/645 (45%), Gaps = 90/645 (13%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           FD +     + WN ++     +     +I L+ +M  S      D+YT+S V K+ +  R
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSCVSKSFSSLR 58

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           ++  G+ +H   ++        V NSL+  Y             LK   VD ++     K
Sbjct: 59  SVHGGEQLHGFILKSGFGERNSVGNSLVAFY-------------LKNQRVDSAR-----K 100

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD M  R+V++WN+I++ YV      + +  F  ML  GI     + V+VF   +    
Sbjct: 101 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRL 160

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+ + VK  + +  +    ++ + MY++ G  D A+ +F    +R+   + +MI
Sbjct: 161 ISLGRAVHSIGVK--ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 218

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +     EA++LF + +E + I  D  T  + L+  ++ + LD G+++H +I +N +
Sbjct: 219 AGYAREGLAGEAVKLF-EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDL 277

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLV-Y 400
              + V NA+++                    +D++SWNT+I  + +N   +E L L   
Sbjct: 278 GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 337

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
            ++++ F  D  TV  +L A ++L   D G++ H Y++R+G   +  + + L+DMYAK G
Sbjct: 338 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 397

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A  +F  +D   +D  +W  MIAGY  +G  +EA   F QM +  +  + ++  S+
Sbjct: 398 ALLLAHMLF--DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 455

Query: 520 LPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           L AC+  G ++ G +   F+I      ++  V     ++DM +++G +  A      +P 
Sbjct: 456 LYACSHSGLVDEGWRF--FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMP- 512

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
                                            I PDA  + A+L  C     V    ++
Sbjct: 513 ---------------------------------IPPDATIWGALLCGCRIHHDVKLAEKV 539

Query: 637 FDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
               ++ ++++P +T +Y  +A++     K  +     K +G+ G
Sbjct: 540 ---AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 581



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 219/459 (47%), Gaps = 51/459 (11%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R   AR++FD +T    + WN+II G+V N L  + + ++ QM  S      D  T  SV
Sbjct: 94  RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG--IEIDLATIVSV 151

Query: 114 LKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
              CA++R + +G+AVH   ++ CFS   RF  N+LL+MYS C              ++D
Sbjct: 152 FAGCADSRLISLGRAVHSIGVKACFSREDRFC-NTLLDMYSKC-------------GDLD 197

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            +K      VF  M  R+VV++ ++++ Y +     EAV+ F  M   GI P   +   V
Sbjct: 198 SAK-----AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 252

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               +          V+  + +  ++   D+FV+++ + MYA+ G    A  +F     +
Sbjct: 253 LNCCARYRLLDEGKRVHEWIKE--NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 310

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT+IGGY +N +  EA+ LF  +LE      D+ T    L A + L   D G+++
Sbjct: 311 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 370

Query: 353 HAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           H YI++N                     + L  ++ + +  +D+VSW  MI+ +  +G  
Sbjct: 371 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 430

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY- 450
            E + L  +M++ G   D ++  +LL A S+    D G +    ++RH    E  +E Y 
Sbjct: 431 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN-IMRHECKIEPTVEHYA 489

Query: 451 -LIDMYAKSG-LIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++DM A++G LIK  R  F +N     D   W A++ G
Sbjct: 490 CIVDMLARTGDLIKAYR--FIENMPIPPDATIWGALLCG 526


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/600 (35%), Positives = 340/600 (56%), Gaps = 32/600 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           +VFD M RRN  AWN ++   V   R+ EA+  F  M+  G +     ++  V  A ++L
Sbjct: 109 RVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAAL 168

Query: 240 GDYKSADVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           G       V+ ++   +  G+   N +FV  + + M+A+ GC D AR +F++   R+   
Sbjct: 169 GAVAQGRKVWEMVETDIASGNARPN-VFVQCALVDMFAKCGCLDEARNVFESMQVRDLAA 227

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  MIGG V + + +E ++LF   +  +    D +   + +SA  +  EL +G  LH   
Sbjct: 228 WTAMIGGTVHSGNWLEVVDLFNH-MRSEGFGVDSLIAATVISACGRAGELQVGTALHGCA 286

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           +K+  +  + V NA+++                    +DVVSW+++I  + QNG+ +  +
Sbjct: 287 VKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSV 346

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMY 455
            L  EM   G   +S T+ ++L   S L+    GK+ H + +RHG+   E + S LID+Y
Sbjct: 347 SLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLY 406

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K GLI+ A  IF    + D+D A WN+M+AGY  NG  + AF A R + +  + P+ VT
Sbjct: 407 SKQGLIRVAETIFWL--TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVT 464

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + SVLP CN    +  GK+LH + I+Y ++    V  +L+DMY K G +  A  VF  + 
Sbjct: 465 VVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMT 524

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E+N+VTY  +I  +G+H   ++ALS F  MK  GI PD +TFVA+LS CS+AGL+D+GL 
Sbjct: 525 ERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLH 584

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           ++  M  +Y I P  EHY C+ D+  R GK+ EA+ F+  + EE  + ++ G LL +CR+
Sbjct: 585 LYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI-DVLGGLLAACRV 643

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H   ++AE+V K++ E +  +  PGYH+LLSNIYA+ G W +V ++R  ++ER L+KE G
Sbjct: 644 HNRMDIAELVGKRIFEQNPND--PGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETG 701



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 243/506 (48%), Gaps = 40/506 (7%)

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +S  ++   L S  D++ A  ++  ++  G  + +   + +  +  YA+LG    A ++
Sbjct: 53  VVSHASLLLRLQSCPDFQEARRLHAAVLVGG--HGHGTVLVAQLVRAYAKLGDVAHALRV 110

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF------LSALSA 339
           FD    RN+  WN +I G V      EA+E+F  ++    +  D  T+       +AL A
Sbjct: 111 FDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGA 170

Query: 340 VSQ------LQELDLGQQ-------LHAYIIKNFVALPVI-----VLNAVIERDVVSWNT 381
           V+Q      + E D+          +   ++  F     +     V  ++  RD+ +W  
Sbjct: 171 VAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTA 230

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI   V +G   E + L   M+ +GF +DS+    ++SA        VG   H   ++ G
Sbjct: 231 MIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSG 290

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + + L+DMY K G ++ A  +F   +S  +D  +W+++I GY+QNG+   +   
Sbjct: 291 ASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS--KDVVSWSSLIVGYSQNGMHNVSVSL 348

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M+   + PN  T+AS+LP  + +  I  GK++H FSIR+ L+++ FV ++LID+YSK
Sbjct: 349 FCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSK 408

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I  A  +F    +K+   + +M+ GY  +G S+ A    R ++  G++PD +T V+V
Sbjct: 409 QGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSV 468

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKVVEAYEFVKEL 676
           L  C+   ++ +G ++       Y I+      C V     DM  + G +  A E  + +
Sbjct: 469 LPLCNQHHMLIQGKEL-----HAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLM 523

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELA 702
            E   V   +  L+ S   H H + A
Sbjct: 524 TERNTV--TYNILISSFGKHNHEDQA 547



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 257/546 (47%), Gaps = 50/546 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD + R  +  WN +I G V      EA+ ++  M       + D +TY  V+KAC
Sbjct: 107 ALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGS-VAVDGFTYPPVIKAC 165

Query: 118 AE----TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A      +  ++ + V        + P+ FV  +L++M++ C   LD             
Sbjct: 166 AALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKC-GCLDEAR---------- 214

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VF++M+ R++ AW  ++   V +  ++E V  F  M   G    ++    V 
Sbjct: 215 -------NVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVI 267

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A    G+ +    ++G  VK G+    D++V+++ + MY + GC + A  +F +   ++
Sbjct: 268 SACGRAGELQVGTALHGCAVKSGAS--GDIYVSNALVDMYCKCGCVEMADCLFWSTNSKD 325

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+++I GY QN     ++ LF +++ L  I  +  T  S L  +S L+ +  G+++H
Sbjct: 326 VVSWSSLIVGYSQNGMHNVSVSLFCEMISLG-INPNSSTLASILPCLSVLKLIRSGKEIH 384

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
            + I++ +     V++A+I                    ++D+  WN+M++ +  NG  D
Sbjct: 385 CFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSD 444

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLI 452
                +  +QK G   D VTV ++L   +       GK+ HAY++++ I+    + + L+
Sbjct: 445 SAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALL 504

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G ++ A+++F+     +R+  T+N +I+ + ++   ++A   F  M    + P+
Sbjct: 505 DMYCKCGFLEVAKEVFQLMT--ERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPD 562

Query: 513 VVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  ++L  C+  G I+ G  L H     Y +       + ++D+YS+ G ++ A    
Sbjct: 563 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 622

Query: 572 AKIPEK 577
           + + E+
Sbjct: 623 SNMAEE 628



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 222/477 (46%), Gaps = 48/477 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F+S+       W  +I G V +    E + L++ M+  S     D+   ++V+ AC
Sbjct: 213 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR--SEGFGVDSLIAATVISAC 270

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L++G A+H   ++  ++   +V N+L++MY  C                     +
Sbjct: 271 GRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKC------------------GCVE 312

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   +F +   ++VV+W++++  Y +   +  +V  F  M+ +GI P++ +  ++ P LS
Sbjct: 313 MADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLS 372

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +S   ++   ++ G E     FV S+ I +Y++ G    A  IF   L+++  +W
Sbjct: 373 VLKLIRSGKEIHCFSIRHGLERSE--FVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIW 430

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+ GY  N +   A    +++L+   +  D VT +S L   +Q   L  G++LHAY+I
Sbjct: 431 NSMVAGYAVNGYSDSAF-CALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVI 489

Query: 358 K--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K                     F+ +   V   + ER+ V++N +IS+F ++  +D+ L 
Sbjct: 490 KYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALS 549

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMY 455
               M++ G   D VT  ALLS  S+    D G    H+ L  + I  E    S ++D+Y
Sbjct: 550 FFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 609

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           ++ G +  A   F  N + + +      ++A    +  ++ A +  +++ E N  PN
Sbjct: 610 SRCGKLDEA-WCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQN--PN 663



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 191/420 (45%), Gaps = 40/420 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A  LF S      V W+++I+G+  N +   ++ L+ +M   S   + ++ T
Sbjct: 306 CKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMI--SLGINPNSST 363

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +S+L   +  + +R GK +HC  IR     S FV ++L+++YS           GL  V
Sbjct: 364 LASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSK---------QGLIRV 414

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +F     +++  WN++V+ Y        A    R++ ++G++P  ++ 
Sbjct: 415 AE---------TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTV 465

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDN 288
           V+V P  +          ++  ++K     +N +   ++A+  MY + G  + A+++F  
Sbjct: 466 VSVLPLCNQHHMLIQGKELHAYVIKY---CINSVCSVNNALLDMYCKCGFLEVAKEVFQL 522

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERNT  +N +I  + ++NH  +A+  F  +++ D I  D VTF++ LS  S    +D 
Sbjct: 523 MTERNTVTYNILISSFGKHNHEDQALSFF-DLMKRDGIAPDKVTFVALLSCCSHAGLIDK 581

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G  L+  ++ ++   P        E++   ++ ++  + + G  DE    +  M ++   
Sbjct: 582 GLHLYHSMLHDYNISP--------EKE--HYSCIVDLYSRCGKLDEAWCFMSNMAEE--- 628

Query: 409 IDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
              + V   L AA  + N+ D+ +     +     +  G    L ++YA +G+     +I
Sbjct: 629 -PEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRI 687


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/600 (35%), Positives = 340/600 (56%), Gaps = 32/600 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           +VFD M RRN  AWN ++   V   R+ EA+  F  M+  G +     ++  V  A ++L
Sbjct: 104 RVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAAL 163

Query: 240 GDYKSADVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           G       V+ ++   +  G+   N +FV  + + M+A+ GC D AR +F++   R+   
Sbjct: 164 GAVAQGRKVWEMVEADIASGNARPN-VFVQCALVDMFAKCGCLDEARNVFESMQVRDLAA 222

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  MIGG V + + +E ++LF   +  +    D +   + +SA  +  EL +G  LH   
Sbjct: 223 WTAMIGGTVHSGNWLEVVDLFNH-MRSEGFGVDSLIAATVISACGRAGELQVGTALHGCA 281

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           +K+  +  + V NA+++                    +DVVSW+++I  + QNG+ +  +
Sbjct: 282 VKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSV 341

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMY 455
            L  EM   G   +S T+ ++L   S L+    GK+ H + +RHG+   E + S LID+Y
Sbjct: 342 SLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLY 401

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K GLI+ A  IF    + D+D A WN+M+AGY  NG  + AF A R + +  + P+ VT
Sbjct: 402 SKQGLIRVAETIFWL--TLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVT 459

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + SVLP CN    +  GK+LH + I+Y ++    V  +L+DMY K G +  A  VF  + 
Sbjct: 460 VVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMT 519

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E+N+VTY  +I  +G+H   ++ALS F  MK  GI PD +TFVA+LS CS+AGL+D+GL 
Sbjct: 520 ERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLH 579

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           ++  M  +Y I P  EHY C+ D+  R GK+ EA+ F+  + EE  + ++ G LL +CR+
Sbjct: 580 LYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI-DVLGGLLAACRV 638

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H   ++AE+V K++ E +  +  PGYH+LLSNIYA+ G W +V ++R  ++ER L+KE G
Sbjct: 639 HNRMDIAELVGKRIFEQNPND--PGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETG 696



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 243/506 (48%), Gaps = 40/506 (7%)

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +S  ++   L S  D++ A  ++  ++  G  + +   + +  +  YA+LG    A ++
Sbjct: 48  VVSHASLLLRLQSCPDFQEARRLHAAVLVGG--HGHGTVLVAQLVRAYAKLGDVAHALRV 105

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF------LSALSA 339
           FD    RN+  WN +I G V      EA+E+F  ++    +  D  T+       +AL A
Sbjct: 106 FDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGA 165

Query: 340 VSQ------LQELDLGQQ-------LHAYIIKNFVALPVI-----VLNAVIERDVVSWNT 381
           V+Q      + E D+          +   ++  F     +     V  ++  RD+ +W  
Sbjct: 166 VAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTA 225

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI   V +G   E + L   M+ +GF +DS+    ++SA        VG   H   ++ G
Sbjct: 226 MIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSG 285

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + + L+DMY K G ++ A  +F   +S  +D  +W+++I GY+QNG+   +   
Sbjct: 286 ASGDIYVSNALVDMYCKCGCVEMADCLFWSTNS--KDVVSWSSLIVGYSQNGMHNVSVSL 343

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M+   + PN  T+AS+LP  + +  I  GK++H FSIR+ L+++ FV ++LID+YSK
Sbjct: 344 FCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSK 403

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I  A  +F    +K+   + +M+ GY  +G S+ A    R ++  G++PD +T V+V
Sbjct: 404 QGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSV 463

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKVVEAYEFVKEL 676
           L  C+   ++ +G ++       Y I+      C V     DM  + G +  A E  + +
Sbjct: 464 LPLCNQHHMLIQGKEL-----HAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLM 518

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELA 702
            E   V   +  L+ S   H H + A
Sbjct: 519 TERNTV--TYNILISSFGKHNHEDQA 542



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 257/546 (47%), Gaps = 50/546 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD + R  +  WN +I G V      EA+ ++  M       + D +TY  V+KAC
Sbjct: 102 ALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGS-VAVDGFTYPPVIKAC 160

Query: 118 AE----TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A      +  ++ + V        + P+ FV  +L++M++ C   LD             
Sbjct: 161 AALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKC-GCLDEAR---------- 209

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VF++M+ R++ AW  ++   V +  ++E V  F  M   G    ++    V 
Sbjct: 210 -------NVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVI 262

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A    G+ +    ++G  VK G+    D++V+++ + MY + GC + A  +F +   ++
Sbjct: 263 SACGRAGELQVGTALHGCAVKSGAS--GDIYVSNALVDMYCKCGCVEMADCLFWSTNSKD 320

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+++I GY QN     ++ LF +++ L  I  +  T  S L  +S L+ +  G+++H
Sbjct: 321 VVSWSSLIVGYSQNGMHNVSVSLFCEMISLG-INPNSSTLASILPCLSVLKLIRSGKEIH 379

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
            + I++ +     V++A+I                    ++D+  WN+M++ +  NG  D
Sbjct: 380 CFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSD 439

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLI 452
                +  +QK G   D VTV ++L   +       GK+ HAY++++ I+    + + L+
Sbjct: 440 SAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALL 499

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G ++ A+++F+     +R+  T+N +I+ + ++   ++A   F  M    + P+
Sbjct: 500 DMYCKCGFLEVAKEVFQLMT--ERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPD 557

Query: 513 VVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  ++L  C+  G I+ G  L H     Y +       + ++D+YS+ G ++ A    
Sbjct: 558 KVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFM 617

Query: 572 AKIPEK 577
           + + E+
Sbjct: 618 SNMAEE 623



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 222/477 (46%), Gaps = 48/477 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F+S+       W  +I G V +    E + L++ M+  S     D+   ++V+ AC
Sbjct: 208 ARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMR--SEGFGVDSLIAATVISAC 265

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L++G A+H   ++  ++   +V N+L++MY  C                     +
Sbjct: 266 GRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKC------------------GCVE 307

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   +F +   ++VV+W++++  Y +   +  +V  F  M+ +GI P++ +  ++ P LS
Sbjct: 308 MADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLS 367

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +S   ++   ++ G E     FV S+ I +Y++ G    A  IF   L+++  +W
Sbjct: 368 VLKLIRSGKEIHCFSIRHGLERSE--FVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIW 425

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+ GY  N +   A    +++L+   +  D VT +S L   +Q   L  G++LHAY+I
Sbjct: 426 NSMVAGYAVNGYSDSAF-CALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVI 484

Query: 358 K--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K                     F+ +   V   + ER+ V++N +IS+F ++  +D+ L 
Sbjct: 485 KYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALS 544

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMY 455
               M++ G   D VT  ALLS  S+    D G    H+ L  + I  E    S ++D+Y
Sbjct: 545 FFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLY 604

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           ++ G +  A   F  N + + +      ++A    +  ++ A +  +++ E N  PN
Sbjct: 605 SRCGKLDEA-WCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQN--PN 658



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/420 (22%), Positives = 191/420 (45%), Gaps = 40/420 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A  LF S      V W+++I+G+  N +   ++ L+ +M   S   + ++ T
Sbjct: 301 CKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMI--SLGINPNSST 358

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +S+L   +  + +R GK +HC  IR     S FV ++L+++YS           GL  V
Sbjct: 359 LASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSK---------QGLIRV 409

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +F     +++  WN++V+ Y        A    R++ ++G++P  ++ 
Sbjct: 410 AE---------TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTV 460

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDN 288
           V+V P  +          ++  ++K     +N +   ++A+  MY + G  + A+++F  
Sbjct: 461 VSVLPLCNQHHMLIQGKELHAYVIKY---CINSVCSVNNALLDMYCKCGFLEVAKEVFQL 517

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERNT  +N +I  + ++NH  +A+  F  +++ D I  D VTF++ LS  S    +D 
Sbjct: 518 MTERNTVTYNILISSFGKHNHEDQALSFF-DLMKRDGIAPDKVTFVALLSCCSHAGLIDK 576

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G  L+  ++ ++   P        E++   ++ ++  + + G  DE    +  M ++   
Sbjct: 577 GLHLYHSMLHDYNISP--------EKE--HYSCIVDLYSRCGKLDEAWCFMSNMAEE--- 623

Query: 409 IDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
              + V   L AA  + N+ D+ +     +     +  G    L ++YA +G+     +I
Sbjct: 624 -PEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRI 682


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 239/747 (31%), Positives = 396/747 (53%), Gaps = 52/747 (6%)

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
           IWN+II  F  N    +A+  Y ++++S    S D YT+ SV+KACA   +  +G  V+ 
Sbjct: 73  IWNSIIRAFSKNGWFPKALEFYGKLRESK--VSPDKYTFPSVIKACAGLFDAEMGDLVYK 130

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             +        +V N+L++MYS          +GL              +VFD M  R++
Sbjct: 131 QILEMGFESDLYVGNALVDMYSR---------MGL---------LSRARQVFDEMPVRDL 172

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+WN+++S Y     Y EA+  +  +    I P + +  +V PA ++L   K    ++G 
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGF 232

Query: 252 LVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            +K G   VN + V ++ +  MY +      AR++FD  + R++  +NTMI GY++    
Sbjct: 233 TLKSG---VNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMV 289

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            E++++F++   LD+   D +T  S L A   L++L L + ++ Y+++    L   V N 
Sbjct: 290 EESVKMFLE--NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNI 347

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I+                    +D VSWN++IS ++Q+G   E + L   M       D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
            +T   L+S ++ L +   GK  H+  ++ GI+ +  + + LIDMYAK G +  + +IF 
Sbjct: 408 HITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIF- 466

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
            N  G  D  TWN +I+   + G          QM ++ V P++ T    LP C  +   
Sbjct: 467 -NSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
            LGK++H   +R+  +  + +G +LI+MYSK G +  +  VF ++  ++ VT+T MI  Y
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAY 585

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
           G +G  E+AL  F  M+  GI PD++ F+A++ ACS++GLV++GL  F+ M+  YKI P 
Sbjct: 586 GMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPM 645

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY CV D+L R  K+ +A EF++ +  E +   IW S+L +CR  G  E AE V++++
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIEPDA-SIWASVLRACRTSGDMETAERVSRRI 704

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           +E++  +  PGY +L SN YA    W+ V  +RK +R++ ++K  G SWI++G  V+ F 
Sbjct: 705 IELNPDD--PGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFC 762

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S D   PQS  I++ LE L   M   G
Sbjct: 763 SGDDSAPQSEAIHKSLEILYSLMAKEG 789



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 163/593 (27%), Positives = 278/593 (46%), Gaps = 82/593 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+FD +     V WN++I G+  +    EA+ +Y +++ S  +   D++T SSVL A 
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNS--WIVPDSFTVSSVLPAF 217

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    ++ G+ +H   ++   N    V N LL MY       DA                
Sbjct: 218 ANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDAR--------------- 262

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  R+ V +NT++  Y+K E   E+V+ F   L    +P  ++  +V  A  
Sbjct: 263 ---RVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVTSVLCACG 318

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L D   A  +Y  +++ G  +V +  V +  I +YA+ G    AR +F++   ++T  W
Sbjct: 319 HLRDLSLAKYIYNYMLRAG--FVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N++I GY+Q+   +EA++LF  ++ ++E   D +T+L  +S  ++L +L  G+ LH+  I
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISLSTRLADLKFGKGLHSNGI 435

Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
           K+ + + + V NA+I+                     D V+WNT+ISA V+ G    GL 
Sbjct: 436 KSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQ 495

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           +  +M+K   + D  T    L   ++L  + +GK+ H  LLR G   E  + + LI+MY+
Sbjct: 496 VTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G ++++ ++FE+     RD  TW  MI  Y   G  E+A  +F  M +  + P+ V  
Sbjct: 556 KCGCLESSFRVFERMSR--RDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVF 613

Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            +++ AC+  G +E G          Y +D  +     ++D+ S+S  I+ A      +P
Sbjct: 614 IALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
                                             IEPDA  + +VL AC  +G
Sbjct: 674 ----------------------------------IEPDASIWASVLRACRTSG 692



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/583 (25%), Positives = 285/583 (48%), Gaps = 37/583 (6%)

Query: 173 YSKYDLVCKVFDTMRR----RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
           YS +          RR    +NV  WN+I+  + K   + +A+  +  +    + P   +
Sbjct: 49  YSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYT 108

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A + L D +  D+VY  ++++G E  +DL+V ++ + MY+ +G    AR++FD 
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYKQILEMGFE--SDLYVGNALVDMYSRMGLLSRARQVFDE 166

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WN++I GY  + +  EA+E++ + L    IV D  T  S L A + L  +  
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHE-LRNSWIVPDSFTVSSVLPAFANLLVVKQ 225

Query: 349 GQQLHAYIIKNFV-ALPVI-------------------VLNAVIERDVVSWNTMISAFVQ 388
           GQ LH + +K+ V ++ V+                   V + ++ RD V++NTMI  +++
Sbjct: 226 GQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-M 447
             + +E + +  E   Q F  D +TVT++L A  +LR+  + K  + Y+LR G   E  +
Sbjct: 286 LEMVEESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTV 344

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           ++ LID+YAK G + TAR +F  N    +D  +WN++I+GY Q+G L EA   F+ M+  
Sbjct: 345 KNILIDVYAKCGDMITARDVF--NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIM 402

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
               + +T   ++     + +++ GK LH   I+  +  ++ V  +LIDMY+K G +  +
Sbjct: 403 EEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDS 462

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  +   ++VT+ T+I    + G     L +   M+   + PD  TF+  L  C+  
Sbjct: 463 LKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASL 522

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
                G +I   + + +  +   +    + +M  + G +  ++   + +     V   W 
Sbjct: 523 AAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVV--TWT 579

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            ++ +  ++G  E A    +  ++M+    +P   V ++ IYA
Sbjct: 580 GMIYAYGMYGEGEKA---LESFVDMEKSGIVPDSVVFIALIYA 619



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 233/489 (47%), Gaps = 71/489 (14%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY-SQMKKSSPYTSCDNYTYSS 112
           RP  AR++FD +    +V +NT+I G++   +  E++ ++   + +  P    D  T +S
Sbjct: 257 RPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKP----DILTVTS 312

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC   R+L + K ++ + +R        V N L+++Y+ C   + A           
Sbjct: 313 VLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITAR---------- 362

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VF++M  ++ V+WN+I+S Y+++   +EA++ F+MM+ M  +   I+++ +
Sbjct: 363 --------DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               + L D K    ++   +K G  Y+ DL V+++ I MYA+ G    + KIF++    
Sbjct: 415 ISLSTRLADLKFGKGLHSNGIKSGI-YI-DLSVSNALIDMYAKCGEVGDSLKIFNSMGTL 472

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  WNT+I   V+       +++  Q +  +++V D  TFL  L   + L    LG+++
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQ-MRKNKVVPDMATFLVTLPMCASLAAKRLGKEI 531

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  +++      + + NA+IE                    RDVV+W  MI A+   G  
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEG 591

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESY- 450
           ++ L    +M+K G + DSV   AL+ A S           H+ L+  G+  FE M+++ 
Sbjct: 592 EKALESFVDMEKSGIVPDSVVFIALIYACS-----------HSGLVEKGLACFEKMKTHY 640

Query: 451 -----------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
                      ++D+ ++S  I  A + F +    + D + W +++     +G +E A  
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEE-FIQAMPIEPDASIWASVLRACRTSGDMETAER 699

Query: 500 AFRQMLEHN 508
             R+++E N
Sbjct: 700 VSRRIIELN 708



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 10/193 (5%)

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           V+ A +  A +   N+   +++H   I   LD + F    LID YS       + +VF +
Sbjct: 5   VSSAFISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRR 64

Query: 574 I-PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           + P KN   + ++I  + ++G   +AL  +  ++   + PD  TF +V+ AC  AGL D 
Sbjct: 65  VSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA 122

Query: 633 GLQIFDLM-QQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
             ++ DL+ +Q  ++   ++ Y    + DM  R+G +  A +   E+      L  W SL
Sbjct: 123 --EMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD--LVSWNSL 178

Query: 690 LGSCRLHGHSELA 702
           +     HG+ E A
Sbjct: 179 ISGYSSHGYYEEA 191


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/641 (35%), Positives = 364/641 (56%), Gaps = 38/641 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSS 238
           FD + ++N+ +WN+I+S YV+  +Y EA+     +  M     +RP   +F  +  A  S
Sbjct: 77  FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L D K    V+  + K+G E  +D+FVA+S + +Y+  G  D A K+F +   ++   WN
Sbjct: 137 LVDGKK---VHCCVFKMGFE--DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN 191

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI G+ QN +   A+ +  + ++ + +  D +T  S L   +Q  ++  G  +H +++K
Sbjct: 192 AMISGFCQNGNAAGALGVLNR-MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK 250

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           + +   V V NA+I                     RD+VSWN++I+A+ QN      L  
Sbjct: 251 HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYA 456
              MQ  G   D +TV +L S  S L +Q + +    +++R     +   + + L++MYA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVT 515
           K G +  A  +F++     +D  +WN ++ GYTQNGL  EA  A+  M E  +  PN  T
Sbjct: 371 KLGYMNCAHTVFDQLPR--KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             S++PA + +G ++ G ++H   I+  L  +VFV T LID+Y K G +  A ++F +IP
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
              SV +  +I   G HG  E AL LF+ M    ++ D ITFV++LSACS++GLVDEG +
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            FD+MQ+EY I+PS +HY C+ D+LGR G + +AYE V+ +  + +   IWG+LL +C++
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA-SIWGALLSACKI 607

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           +G++EL  + + +LLE+D+ N   GY+VLLSNIYA    WE V KVR   R+RGLRK  G
Sbjct: 608 YGNAELGTLASDRLLEVDSENV--GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPG 665

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            S + VG     F + +Q HP+  +IY+ L+ L+ +M++ G
Sbjct: 666 WSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLG 706



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 168/644 (26%), Positives = 297/644 (46%), Gaps = 105/644 (16%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           ++H+L     K +   + ++L  +    G   L+R  FD I +     WN+II  +V   
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 85  LPYEAILLYSQMKKSSPYTSC-------DNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
             +EA+   +Q+     ++ C       D YT+  +LKAC    +L  GK VHC   +  
Sbjct: 100 KYHEAMNCVNQL-----FSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMG 151

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
                FV  SL+++YS                   Y   D+  KVF  M  ++V +WN +
Sbjct: 152 FEDDVFVAASLVHLYSR------------------YGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK--- 254
           +S + +      A+     M   G++  TI+  ++ P  +     +S DV+ G+L+    
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA-----QSDDVINGVLIHLHV 248

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L     +D+FV+++ I MY++ G    A+ +FD    R+   WN++I  Y QNN P  A+
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVI- 372
             F + ++L  I  D +T +S  S  SQL +  + + +  ++I+  ++   V++ NA++ 
Sbjct: 309 RFF-KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSV 412
                               +D +SWNT+++ + QNGL  E +     M++ +  + +  
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
           T  +++ A S++     G + HA L+++ ++ +  + + LID+Y K G ++ A  +F + 
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 472 DSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               RD +  WNA+IA    +G  EEA   F+ ML   V  + +T  S+L AC+  G ++
Sbjct: 488 ---PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVD 544

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-YTTMILGY 589
            G++   F I                M  + G+             K S+  Y  M+   
Sbjct: 545 EGQKC--FDI----------------MQKEYGI-------------KPSLKHYGCMVDLL 573

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           G+ G  E+A  L R+M    I+PDA  + A+LSAC   G  + G
Sbjct: 574 GRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIYGNAELG 614



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 49/443 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A+ +FD +     V WN+II  +  NN P  A+  +  M+        D  T  S
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG--IRPDLLTVVS 328

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +    ++  + RI +++    IR  + +    + N+L+NMY+            L Y+  
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK-----------LGYMNC 377

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM--LRMGIRPSTISF 229
            ++       VFD + R++ ++WNT+V+ Y +     EA+  + MM   R  I P+  ++
Sbjct: 378 AHT-------VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQGTW 429

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++ PA S +G  +    ++  L+K  S Y+ D+FVA+  I +Y + G  + A  +F   
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIK-NSLYL-DVFVATCLIDLYGKCGRLEDAMSLFYE- 486

Query: 290 LERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
           + R+T V WN +I     +    EA++LF  +L  + +  D +TF+S LSA S    +D 
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA-ERVKADHITFVSLLSACSHSGLVDE 545

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           GQ+    + K +   P           +  +  M+    + G  ++   LV  M  Q   
Sbjct: 546 GQKCFDIMQKEYGIKP----------SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQP-- 593

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS----GLIKTA 464
            D+    ALLSA     N ++G      LL       G    L ++YA +    G+IK  
Sbjct: 594 -DASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV- 651

Query: 465 RQIFEKNDSGDRDQATWNAMIAG 487
           R +    D G R    W++++ G
Sbjct: 652 RSL--ARDRGLRKTPGWSSVVVG 672


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 251/812 (30%), Positives = 399/812 (49%), Gaps = 115/812 (14%)

Query: 14  PPTATPPPPQLPQIHSLSPP------IPKLKTPTIRSRLSKICQE-GRPHLARQLFDSIT 66
           P     PP Q+ + +SL+ P       P  KTP + S L   C   G   L  +  D   
Sbjct: 9   PNLWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC-- 66

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
                 +N  I  F        A+ L +Q    SP    +  TY SVL+ CA+ ++++ G
Sbjct: 67  --KITDYNIEICRFCELGNLRRAMELINQ----SPKPDLELRTYCSVLQLCADLKSIQDG 120

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           + +H             + + L+ MY TC    +                    ++FD +
Sbjct: 121 RRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGR------------------RIFDKV 162

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
               V  WN +++ Y K                                   +G+++ + 
Sbjct: 163 ANEKVFLWNLLMNGYAK-----------------------------------IGNFRESL 187

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++  + +LG   V                     ARK+FD   +R+   WN+MI GYV 
Sbjct: 188 SLFKRMRELGIRRVES-------------------ARKLFDELGDRDVISWNSMISGYVS 228

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           N    + ++LF Q+L L  I  D  T +S ++  S    L LG+ LH Y IK      + 
Sbjct: 229 NGLSEKGLDLFEQMLLLG-INTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELT 287

Query: 367 VLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           + N ++                    ER VVSW +MI+ + + GL D  + L +EM+K+G
Sbjct: 288 LNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEG 347

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              D  T+T +L A +     + GK  H Y+  + +  +  + + L+DMYAK G +  A 
Sbjct: 348 ISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAH 407

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F +     +D  +WN MI GY++N L  EA   F +M ++N  PN +T+A +LPAC  
Sbjct: 408 SVFSEMQV--KDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACAS 464

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  +E G+++HG  +R     +  V  +L+DMY K G +  A  +F  IPEK+ V++T M
Sbjct: 465 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 524

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GYG HG    A++ F  M+  GIEPD ++F+++L ACS++GL+DEG   F++M+    
Sbjct: 525 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCC 584

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I+P +EHY C+ D+L R G + +AY+F+K +  E +   IWG+LL  CR++   +LAE V
Sbjct: 585 IEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA-TIWGALLCGCRIYHDVKLAEKV 643

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ + E++  N+  GY+VLL+NIYAE   WE V K+R+ +  RGLRK  GCSWI++ G V
Sbjct: 644 AEHVFELEPENT--GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKV 701

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           + F + D  HP ++KI  +L++    M+  G+
Sbjct: 702 HIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 733


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/634 (32%), Positives = 368/634 (58%), Gaps = 35/634 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M +R++  WNT++    + +++ E +  F  M R   +P   +      A   L +    
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 246 DVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           ++++G +   V LGS    DL+V SS I+MY + G    A ++FD   + +   W++M+ 
Sbjct: 61  EMIHGFVKKDVTLGS----DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 116

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G+ +N  P +A+E F +++   ++  D VT ++ +SA ++L    LG+ +H ++I+   +
Sbjct: 117 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 176

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + ++N+++                    E+DV+SW+T+I+ +VQNG   E L++  +M
Sbjct: 177 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM 236

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
              G   +  TV  +L A +   + + G++TH   +R G+  E  + + L+DMY K    
Sbjct: 237 MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 296

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVL 520
           + A  +F +     +D  +W A+I+G+T NG+   +   F  ML E+N  P+ + +  VL
Sbjct: 297 EEAYAVFSRIPR--KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVL 354

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            +C+ +G +E  K  H + I+Y  D N F+G SL+++YS+ G +  A+ VF  I  K++V
Sbjct: 355 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 414

Query: 581 TYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            +T++I GYG HG   +AL  F  M K   ++P+ +TF+++LSACS+AGL+ EGL+IF L
Sbjct: 415 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 474

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  +Y++ P+ EHY  + D+LGRVG +  A E  K +       +I G+LLG+CR+H + 
Sbjct: 475 MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM-PFSPTPQILGTLLGACRIHQNG 533

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           E+AE VAKKL E+++ ++  GY++L+SN+Y  +G WENV+K+R  +++RG++K +  S I
Sbjct: 534 EMAETVAKKLFELESNHA--GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 591

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           ++   V+RF + D+ HP+   +Y +L+ L + M+
Sbjct: 592 EIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 625



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 253/543 (46%), Gaps = 63/543 (11%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           +T+ +   WNT++          E +  +S M +       DN+T    LKAC E R + 
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP--DNFTLPVALKACGELREVN 58

Query: 125 IGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
            G+ +H    +  +  S  +V +SL+ MY  C   ++A                   ++F
Sbjct: 59  YGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA------------------LRMF 100

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDY 242
           D + + ++V W+++VS + K     +AV  F RM++   + P  ++ + +  A + L + 
Sbjct: 101 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 160

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +    V+G +++ G  + NDL + +S +  YA+   F  A  +F    E++   W+T+I 
Sbjct: 161 RLGRCVHGFVIRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 218

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            YVQN    EA+ +F  +++ D    +  T L  L A +   +L+ G++ H   I+  + 
Sbjct: 219 CYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 277

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL-----DDEGLM 397
             V V  A+++                    +DVVSW  +IS F  NG+     ++  +M
Sbjct: 278 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 337

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
           L+    +     D++ +  +L + S L   +  K  H+Y++++G     F G  + L+++
Sbjct: 338 LLENNTRP----DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVEL 391

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNV 513
           Y++ G +  A ++F  N    +D   W ++I GY  +G   +A   F  M++ + V PN 
Sbjct: 392 YSRCGSLGNASKVF--NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 449

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT  S+L AC+  G I  G ++    +  Y L  N+     L+D+  + G ++ A  +  
Sbjct: 450 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 509

Query: 573 KIP 575
           ++P
Sbjct: 510 RMP 512



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 203/455 (44%), Gaps = 72/455 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A ++FD + +P  V W++++ GF  N  PY+A+  + +M  +S  T  D  T  +
Sbjct: 91  GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP-DRVTLIT 149

Query: 113 VLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++ AC +  N R+G+ VH   I R FSN    V NSLLN Y+   +  +A          
Sbjct: 150 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV-NSLLNCYAKSRAFKEA---------- 198

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     +F  +  ++V++W+T+++ YV+     EA+  F  M+  G  P+  + + 
Sbjct: 199 --------VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 250

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--DFARKIFDNC 289
           V  A ++  D +     + L ++ G E   ++ V+++ + MY  + CF  + A  +F   
Sbjct: 251 VLQACAAAHDLEQGRKTHELAIRKGLE--TEVKVSTALVDMY--MKCFSPEEAYAVFSRI 306

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   W  +I G+  N     +IE F  +L  +    D +  +  L + S+L  L+  
Sbjct: 307 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 366

Query: 350 QQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQN 389
           +  H+Y+IK  F + P I                   V N +  +D V W ++I+ +  +
Sbjct: 367 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 426

Query: 390 GLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF---- 444
           G   + L     M K   +  + VT  ++LSA S           HA L+  G+      
Sbjct: 427 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGLRIFKLM 475

Query: 445 -------EGMESY--LIDMYAKSGLIKTARQIFEK 470
                    +E Y  L+D+  + G + TA +I ++
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 510


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/641 (35%), Positives = 364/641 (56%), Gaps = 38/641 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSS 238
           FD + ++N+ +WN+I+S YV+  +Y EA+     +  M     +RP   +F  +  A  S
Sbjct: 77  FDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS 136

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L D K    V+  + K+G E  +D+FVA+S + +Y+  G  D A K+F +   ++   WN
Sbjct: 137 LVDGKK---VHCCVFKMGFE--DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN 191

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI G+ QN +   A+ +  + ++ + +  D +T  S L   +Q  ++  G  +H +++K
Sbjct: 192 AMISGFCQNGNAAGALGVLNR-MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK 250

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           + +   V V NA+I                     RD+VSWN++I+A+ QN      L  
Sbjct: 251 HGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRF 310

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYA 456
              MQ  G   D +TV +L S  S L +Q + +    +++R     +   + + L++MYA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVT 515
           K G +  A  +F++     +D  +WN ++ GYTQNGL  EA  A+  M E  +  PN  T
Sbjct: 371 KLGYMNCAHTVFDQLPR--KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             S++PA + +G ++ G ++H   I+  L  +VFV T LID+Y K G +  A ++F +IP
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
              SV +  +I   G HG  E AL LF+ M    ++ D ITFV++LSACS++GLVDEG +
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            FD+MQ+EY I+PS +HY C+ D+LGR G + +AYE V+ +  + +   IWG+LL +C++
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA-SIWGALLSACKI 607

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           +G++EL  + + +LLE+D+ N   GY+VLLSNIYA    WE V KVR   R+RGLRK  G
Sbjct: 608 YGNAELGTLASDRLLEVDSENV--GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPG 665

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            S + VG     F + +Q HP+  +IY+ L+ L+ +M++ G
Sbjct: 666 WSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLG 706



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 168/644 (26%), Positives = 297/644 (46%), Gaps = 105/644 (16%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           ++H+L     K +   + ++L  +    G   L+R  FD I +     WN+II  +V   
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 85  LPYEAILLYSQMKKSSPYTSC-------DNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
             +EA+   +Q+     ++ C       D YT+  +LKAC    +L  GK VHC   +  
Sbjct: 100 KYHEAMNCVNQL-----FSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMG 151

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
                FV  SL+++YS                   Y   D+  KVF  M  ++V +WN +
Sbjct: 152 FEDDVFVAASLVHLYSR------------------YGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK--- 254
           +S + +      A+     M   G++  TI+  ++ P  +     +S DV+ G+L+    
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA-----QSDDVINGVLIHLHV 248

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L     +D+FV+++ I MY++ G    A+ +FD    R+   WN++I  Y QNN P  A+
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVI- 372
             F + ++L  I  D +T +S  S  SQL +  + + +  ++I+  ++   V++ NA++ 
Sbjct: 309 RFF-KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSV 412
                               +D +SWNT+++ + QNGL  E +     M++ +  + +  
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
           T  +++ A S++     G + HA L+++ ++ +  + + LID+Y K G ++ A  +F + 
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEI 487

Query: 472 DSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               RD +  WNA+IA    +G  EEA   F+ ML   V  + +T  S+L AC+  G ++
Sbjct: 488 ---PRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVD 544

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-YTTMILGY 589
            G++   F I                M  + G+             K S+  Y  M+   
Sbjct: 545 EGQKC--FDI----------------MQKEYGI-------------KPSLKHYGCMVDLL 573

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           G+ G  E+A  L R+M    I+PDA  + A+LSAC   G  + G
Sbjct: 574 GRAGYLEKAYELVRNMP---IQPDASIWGALLSACKIYGNAELG 614



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 200/443 (45%), Gaps = 49/443 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A+ +FD +     V WN+II  +  NN P  A+  +  M+        D  T  S
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG--IRPDLLTVVS 328

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +    ++  + RI +++    IR  + +    + N+L+NMY+            L Y+  
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK-----------LGYMNC 377

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM--LRMGIRPSTISF 229
            ++       VFD + R++ ++WNT+V+ Y +     EA+  + MM   R  I P+  ++
Sbjct: 378 AHT-------VFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI-PNQGTW 429

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++ PA S +G  +    ++  L+K  S Y+ D+FVA+  I +Y + G  + A  +F   
Sbjct: 430 VSIIPAYSHVGALQQGMKIHAKLIK-NSLYL-DVFVATCLIDLYGKCGRLEDAMSLFYE- 486

Query: 290 LERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
           + R+T V WN +I     +    EA++LF  +L  + +  D +TF+S LSA S    +D 
Sbjct: 487 IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLA-ERVKADHITFVSLLSACSHSGLVDE 545

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           GQ+    + K +   P           +  +  M+    + G  ++   LV  M  Q   
Sbjct: 546 GQKCFDIMQKEYGIKP----------SLKHYGCMVDLLGRAGYLEKAYELVRNMPIQP-- 593

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS----GLIKTA 464
            D+    ALLSA     N ++G      LL       G    L ++YA +    G+IK  
Sbjct: 594 -DASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV- 651

Query: 465 RQIFEKNDSGDRDQATWNAMIAG 487
           R +    D G R    W++++ G
Sbjct: 652 RSL--ARDRGLRKTPGWSSVVVG 672


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 236/766 (30%), Positives = 399/766 (52%), Gaps = 55/766 (7%)

Query: 58   ARQLFDSITR-----PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            A Q+FD ++      P   +WN +I G+       E +  + +M++       D Y+ S 
Sbjct: 495  ALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELG--IRPDGYSLSI 552

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL  C        G+ +H + IR       ++  +L+ MYS+C   ++A           
Sbjct: 553  VLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEA----------- 601

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               + L  K+ +   R N+VAWN ++  +V+   + +++  + +      +  + SF   
Sbjct: 602  ---WSLFGKLEN---RSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGA 655

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            F A S          V+  ++K+   + +D +V +S + MYA+ G  + A+K+FD  L++
Sbjct: 656  FTACSHGEVLDFGRQVHCDVIKM--NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 713

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
              E+ N MI  ++ N    +A+ L+ + ++  E   D  T  S LS  S +   D G+ +
Sbjct: 714  EVELRNAMISAFIGNGRAYDALGLYNK-MKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772

Query: 353  HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
            HA +IK  +   V + +A++                    ERDVV+W +MI+ F QN   
Sbjct: 773  HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF 832

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
             + L L   M+K+G   DS  +T+++SA   L N ++G   H + ++ G+  +  +   L
Sbjct: 833  KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            +DMY+K G  ++A  +F  +   +++   WN+MI+ Y+ NGL E +     Q+L+H    
Sbjct: 893  VDMYSKFGFAESAEMVF--SSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 950

Query: 512  NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            + V+I +VL A + +  +  GK LH + IR  +  ++ V  +LIDMY K G + YA  +F
Sbjct: 951  DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 1010

Query: 572  AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
              +P +N VT+ +MI GYG HG  E A+ LF+ MK     PD +TF+A++++CS++G+V+
Sbjct: 1011 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 1070

Query: 632  EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            EGL +F LM+ EY ++P  EHY  V D+LGR G++ +AY F++ +  + +   +W  LL 
Sbjct: 1071 EGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD-RSVWLCLLF 1129

Query: 692  SCRLHGHSELAEVVAKKLLEMD-TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            +CR H + EL E+VA  LL+M+  R S    +V L N+Y E   W+    +R  M+ RGL
Sbjct: 1130 ACRAHRNMELGELVADNLLKMEPARGS---NYVPLLNLYGEVEMWDRAANLRASMKGRGL 1186

Query: 751  RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +K  GCSWI+V   V+ F S D    +  +IY+ L  L   M   G
Sbjct: 1187 KKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 181/654 (27%), Positives = 307/654 (46%), Gaps = 55/654 (8%)

Query: 88   EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            +A+ L+S+   S+  T+   +T+ S+LK CA   NL  G+ +H   +        ++  S
Sbjct: 424  QALELHSKTPHSALTTA--KFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATS 481

Query: 148  LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR-----NVVAWNTIVSWYV 202
            L+NMY  C         GL              +VFD M        ++  WN ++  Y 
Sbjct: 482  LINMYVKC---------GL---------LGSALQVFDKMSESRDSAPDITVWNPVIDGYF 523

Query: 203  KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
            K   + E + QF  M  +GIRP   S   V    + L  Y +   ++G +++  + +  D
Sbjct: 524  KYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIR--NMFEGD 581

Query: 263  LFVASSAIFMYAELGCFDFARKIFDNCLER-NTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
             ++ ++ I MY+       A  +F     R N   WN MIGG+V+N    +++EL+  + 
Sbjct: 582  PYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELY-SLA 640

Query: 322  ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI-------------- 366
            + +       +F  A +A S  + LD G+Q+H  +IK NF   P +              
Sbjct: 641  KNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSV 700

Query: 367  -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                 V + V++++V   N MISAF+ NG   + L L  +M+     +DS T+++LLS  
Sbjct: 701  EDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGC 760

Query: 422  SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            S + + D G+  HA +++  +     ++S L+ MY K G  + A  +F      +RD   
Sbjct: 761  SVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK--ERDVVA 818

Query: 481  WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
            W +MIAG+ QN   ++A   FR M +  V  +   + SV+ A   + N+ELG  +HGF+I
Sbjct: 819  WGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 878

Query: 541  RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
            +  L+ +VFV  SL+DMYSK G    A  VF+ +P KN V + +MI  Y  +G+ E +++
Sbjct: 879  KRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSIN 938

Query: 601  LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
            L   +   G   D+++   VL A S    + +G +     Q   +I    +    + DM 
Sbjct: 939  LLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQIPSDLQVENALIDMY 997

Query: 661  GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
             + G +  A    + +      L  W S++     HG+ E A  + K++   +T
Sbjct: 998  VKCGCLKYAQLIFENMPRRN--LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSET 1049



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 224/461 (48%), Gaps = 48/461 (10%)

Query: 44   SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
            S L+   + G    A+++FD +      + N +I  F+ N   Y+A+ LY++MK     T
Sbjct: 689  SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE--T 746

Query: 104  SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
              D++T SS+L  C+   +   G+ VH   I+     +  + ++LL MY  C S+ DA+ 
Sbjct: 747  PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD- 805

Query: 164  VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                              VF TM+ R+VVAW ++++ + +  R+ +A+  FR M + G++
Sbjct: 806  -----------------SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 848

Query: 224  PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
              +    +V  A   L + +   +++G  +K G E  +D+FVA S + MY++ G  + A 
Sbjct: 849  ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLE--SDVFVACSLVDMYSKFGFAESAE 906

Query: 284  KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
             +F +   +N   WN+MI  Y  N  P  +I L  Q+L+      D V+  + L AVS +
Sbjct: 907  MVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQ-HGFYLDSVSITTVLVAVSSV 965

Query: 344  QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
              L  G+ LHAY I+  +   + V NA+I+                    R++V+WN+MI
Sbjct: 966  AALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMI 1025

Query: 384  SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LRHGI 442
            + +  +G  +E + L  EM++     D VT  AL+++ S+    + G      + + +G+
Sbjct: 1026 AGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGV 1085

Query: 443  HFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
                ME Y  ++D+  ++G +  A   F +    D D++ W
Sbjct: 1086 EPR-MEHYASVVDLLGRAGRLDDAYS-FIRGMPIDADRSVW 1124



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 91/213 (42%), Gaps = 9/213 (4%)

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           I    Q G   +A     +     +T    T  S+L  C  + N+  G+ +H   +   L
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS-----VTYTTMILGYGQHGMSERAL 599
             + ++ TSLI+MY K G++  A  VF K+ E          +  +I GY ++G  E  L
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVAD 658
           + F  M+  GI PD  +   VL  C+       G QI   +++  ++  P  E    +  
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLE--TALIG 590

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           M     + +EA+    +L    N++  W  ++G
Sbjct: 591 MYSSCSRPMEAWSLFGKLENRSNIVA-WNVMIG 622


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 250/813 (30%), Positives = 417/813 (51%), Gaps = 84/813 (10%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T ++ L+   + G      +LFD   R   VIWN ++ G+  +      ++   +   SS
Sbjct: 74  TSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSS 133

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC-LSSL 159
                 + T ++VL  CA + NL  GK+VH + I+       F  N+L++MY+ C L + 
Sbjct: 134 GEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVAC 193

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           DA                    VFD++  ++VV+WN +++   +     EA   F +M++
Sbjct: 194 DAY------------------AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK 235

Query: 220 MGIRPSTISFVNVFPALSSLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
             ++P+  +  N+ P  +S  +   ++    ++  +++   E   D+ V ++ +  Y ++
Sbjct: 236 GSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQW-PELSADVSVCNALLSFYLKV 294

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    A  +F     R+   WNT+I GY  N   ++++ +F  ++ L+ ++ D VT +S 
Sbjct: 295 GRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSI 354

Query: 337 LSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVI--------------------ERD 375
           L A +QL  L  G+Q+HAYI+++ F+       NA++                     +D
Sbjct: 355 LPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKD 414

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS-AASNLRNQDVGKQTH 434
           ++SWN+++ AF +       L L++ M K     DSVT+  ++   AS LR + V K+ H
Sbjct: 415 LISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKV-KEIH 473

Query: 435 AYLLRHGIHFEG----MESYLIDMYAKSGLIKTARQIF----EKND-------------- 472
            Y +R G         + + ++D Y+K G I+ A ++F    EK +              
Sbjct: 474 GYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGL 533

Query: 473 ----------SG--DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
                     SG  + D  TWN M+  Y +N   E+A   F ++    + P+VVTI S++
Sbjct: 534 GSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLI 593

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
           P C  M ++ L +Q HG+ IR   +     GT L+D Y+K G+I YA  +F    +K+ V
Sbjct: 594 PVCTQMASVHLLRQCHGYIIRSSFEDLHLKGT-LLDAYAKCGIIGYAYKIFQSSVDKDLV 652

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            +T MI GY  HGMSE+AL  F  M   GI+PD + F ++LSACS+AG + EGL+IFD +
Sbjct: 653 MFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSI 712

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           ++ + ++P+ E + CV D+L R G V EAY FV ++  E N   IWG+LLG+C+ +   E
Sbjct: 713 EKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANA-NIWGTLLGACKTYHEVE 771

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L  +VA KL +++  +   G +++LSN+YA +  W+ V +VRK MR + L+K  GCSWI+
Sbjct: 772 LGRIVADKLFKIEAND--IGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIE 829

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           V    N F   D  HPQ + IY  L  L  +++
Sbjct: 830 VERTNNIFVVGDCSHPQRNLIYSTLCTLDQQVK 862



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 189/732 (25%), Positives = 329/732 (44%), Gaps = 118/732 (16%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           W + I     ++   EA+  +    K S     D+   +++LK+C+      +GK +H +
Sbjct: 3   WASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSY 62

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            ++           +LLNMY+ C                     D   K+FD   R + V
Sbjct: 63  VVKQGHVSCHVTSKALLNMYAKC------------------GMLDDCHKLFDQFGRCDPV 104

Query: 193 AWNTIVSWYVKTERY-VEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYG 250
            WN ++S Y ++ +   + ++ FR M   G + PS+++   V P  +  G+      V+G
Sbjct: 105 IWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHG 164

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELG---CFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            ++K G E   D F  ++ + MYA+ G   C  +A  +FD+ + ++   WN MI G  +N
Sbjct: 165 YVIKSGFEM--DTFAGNALVSMYAKCGLVACDAYA--VFDSIIHKDVVSWNAMIAGLAEN 220

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE---LDLGQQLHAYIIK-NFVAL 363
               EA  LF  +++   +  +  T  + L   +   E      G+Q+H+Y+++   ++ 
Sbjct: 221 GLLKEAFSLFSLMMK-GSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSA 279

Query: 364 PVIVLNAVIE--------------------RDVVSWNTMISAFVQNG-----LDDEGLML 398
            V V NA++                     RD+VSWNT+I+ +  NG     L   G ++
Sbjct: 280 DVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLV 339

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES--YLIDMYA 456
             EM     ++DSVT+ ++L A + L N   GKQ HAY+LRH   FE   +   L+  YA
Sbjct: 340 SLEM----LLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYA 395

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I+ A   F       +D  +WN+++  + +             ML+ ++ P+ VTI
Sbjct: 396 KCGYIEEAYHTFSM--ISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTI 453

Query: 517 ASVLPACNPMGNIELGKQLHGFSIR---YLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            +++  C  +  ++  K++HG+SIR    L      VG +++D YSK G I YA  +F  
Sbjct: 454 LTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQN 513

Query: 574 IPEK-NSVTYTTMILGY---GQH--------GMS--------------------ERALSL 601
           + EK N VT  ++I GY   G H        GMS                    E+AL L
Sbjct: 514 LSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALEL 573

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ--EYKIQPSTEHY---CCV 656
           F  ++  G++PD +T ++++  C+    V        L++Q   Y I+ S E       +
Sbjct: 574 FLKLQTQGMKPDVVTIMSLIPVCTQMASV-------HLLRQCHGYIIRSSFEDLHLKGTL 626

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D   + G +  AY+  +   ++   L ++ +++G   +HG SE A      +L M  + 
Sbjct: 627 LDAYAKCGIIGYAYKIFQSSVDKD--LVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP 684

Query: 717 SMPGYHVLLSNI 728
                HV+ ++I
Sbjct: 685 D----HVIFTSI 692



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 143/604 (23%), Positives = 271/604 (44%), Gaps = 59/604 (9%)

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLR--MGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           + W + +       R+ EA+  F   L+     +P       +  + S+L        ++
Sbjct: 1   MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN- 308
             +VK G  +V+    + + + MYA+ G  D   K+FD     +  +WN ++ GY ++  
Sbjct: 61  SYVVKQG--HVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGK 118

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-- 366
           +  + +++F  +    E++   VT  + L   ++   L+ G+ +H Y+IK+   +     
Sbjct: 119 NDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAG 178

Query: 367 -------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                              V +++I +DVVSWN MI+   +NGL  E   L   M K   
Sbjct: 179 NALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSV 238

Query: 408 MIDSVTVTALLSAASNLRN---QDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIK 462
             +  TV  +L   ++         G+Q H+Y+L+       +   + L+  Y K G  K
Sbjct: 239 KPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTK 298

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLP 521
            A  +F   D+  RD  +WN +IAGY  NG   ++   F  ++    +  + VT+ S+LP
Sbjct: 299 EAESLFWAMDA--RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILP 356

Query: 522 ACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
           AC  + N++ GKQ+H + +R+  L ++   G +L+  Y+K G I  A + F+ I  K+ +
Sbjct: 357 ACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLI 416

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++ +++  +G+     R LSL   M    I PD++T + ++  C+    V +  +I    
Sbjct: 417 SWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEI---- 472

Query: 641 QQEYKIQPSTEHYCCVADMLG--------RVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
              Y I+ S    C  A  +G        + G +  A +  + L E+ N++     + G 
Sbjct: 473 -HGYSIR-SGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGY 530

Query: 693 CRLHGHSELAEVVAKKLLEMD--TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
             L  H + A ++   + E D  T N       L+  +YAE    E   ++  +++ +G+
Sbjct: 531 VGLGSHYD-ANMIFSGMSETDLTTWN-------LMVRVYAENDCPEQALELFLKLQTQGM 582

Query: 751 RKEV 754
           + +V
Sbjct: 583 KPDV 586


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/744 (30%), Positives = 391/744 (52%), Gaps = 58/744 (7%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           +N II          + +  Y+ M K+  +   D YT+ S+LKAC+      +G ++H  
Sbjct: 37  FNAIINHHSSQGAHRQVLATYASMLKT--HVPSDAYTFPSLLKACSSLNLFSLGLSLHQR 94

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            +    +   ++ +SL+N Y+                   +   D+  KVFD M  RNVV
Sbjct: 95  ILVSGLSLDAYIASSLINFYA------------------KFGFADVARKVFDFMPERNVV 136

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK---SADVVY 249
            W +I+  Y +T R  EA   F  M R GI+PS+++ +++   +S L   +    + ++Y
Sbjct: 137 PWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILY 196

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           G        +++D+ +++S + MY +    +++RK+FD   +R+   WN+++  Y Q  +
Sbjct: 197 G--------FMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGY 248

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             E + L ++ + +     D  TF S LS  +   EL LG+ LH  I++    L   V  
Sbjct: 249 ICEVL-LLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVET 307

Query: 370 AVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           ++I                    ++DVV W  MIS  VQNG  D+ L +  +M K G   
Sbjct: 308 SLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKS 367

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
            + T+ ++++A + L + ++G   H Y+ RH +  +   ++ L+ M+AK G +  +  +F
Sbjct: 368 STATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVF 427

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +K +   R+  +WNAMI GY QNG + +A   F +M   + TP+ +TI S+L  C   G 
Sbjct: 428 DKMNK--RNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQ 485

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + LGK +H F IR  L   + V TSL+DMY K G ++ A   F ++P  + V+++ +I+G
Sbjct: 486 LHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVG 545

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           YG HG  E AL  +      G++P+ + F++VLS+CS+ GLV++GL I++ M +++ I P
Sbjct: 546 YGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAP 605

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           + EH+ CV D+L R G+V EAY   K+   +  VL++ G +L +CR +G++EL + +A  
Sbjct: 606 NLEHHACVVDLLSRAGRVEEAYNLYKKKFSD-PVLDVLGIILDACRANGNNELGDTIAND 664

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           +L +   ++  G  V L++ YA    WE V +    MR  GL+K  G S+ID+ G +  F
Sbjct: 665 ILMLKPMDA--GNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTF 722

Query: 769 ASKDQEHPQSHKIYEMLERLAMEM 792
            +    HPQ  +I   L+ L  EM
Sbjct: 723 FTDHNSHPQFQEIVCTLKFLRKEM 746



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 144/545 (26%), Positives = 270/545 (49%), Gaps = 54/545 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD +     V W +II  +       EA  L+ +M++     S  + T  S
Sbjct: 118 GFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPS--SVTMLS 175

Query: 113 VLKACAETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +L   +E  +++   G A+   F+   +     + NS+L+MY  C +             
Sbjct: 176 LLFGVSELAHVQCLHGSAILYGFMSDIN-----LSNSMLSMYGKCRN------------- 217

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           ++YS+     K+FD M +R++V+WN++VS Y +     E +   + M   G  P   +F 
Sbjct: 218 IEYSR-----KLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFG 272

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V    +S G+ K    ++G +++  + +  D  V +S I MY + G  D A ++F+  L
Sbjct: 273 SVLSVAASRGELKLGRCLHGQILR--TCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSL 330

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +++  +W  MI G VQN    +A+ +F Q+L+   +     T  S ++A +QL   +LG 
Sbjct: 331 DKDVVLWTAMISGLVQNGSADKALAVFRQMLKFG-VKSSTATMASVITACAQLGSYNLGT 389

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            +H Y+ ++ + + +   N+++                    +R++VSWN MI+ + QNG
Sbjct: 390 SVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNG 449

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMES 449
              + L L  EM+      DS+T+ +LL   ++     +GK  H++++R+G+     +++
Sbjct: 450 YVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDT 509

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMY K G +  A++ F +  S   D  +W+A+I GY  +G  E A   + + LE  +
Sbjct: 510 SLVDMYCKCGDLDIAQRCFNQMPS--HDLVSWSAIIVGYGYHGKGETALRFYSKFLESGM 567

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAA 568
            PN V   SVL +C+  G +E G  ++    R + +  N+     ++D+ S++G +  A 
Sbjct: 568 KPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEEAY 627

Query: 569 NVFAK 573
           N++ K
Sbjct: 628 NLYKK 632



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 202/443 (45%), Gaps = 55/443 (12%)

Query: 58  ARQLFDSITRPTTVIWNTII-----IGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           +R+LFD + +   V WN+++     IG++C     E +LL   M+        D  T+ S
Sbjct: 221 SRKLFDYMDQRDLVSWNSLVSAYAQIGYIC-----EVLLLLKTMRIQG--FEPDPQTFGS 273

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL   A    L++G+ +H   +R   +    V  SL+ MY                  + 
Sbjct: 274 VLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMY------------------LK 315

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               D+  ++F+    ++VV W  ++S  V+     +A+  FR ML+ G++ ST +  +V
Sbjct: 316 GGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASV 375

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + LG Y     V+G + +   E   D+   +S + M+A+ G  D +  +FD   +R
Sbjct: 376 ITACAQLGSYNLGTSVHGYMFR--HELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKR 433

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN MI GY QN +  +A+ LF + +  D    D +T +S L   +   +L LG+ +
Sbjct: 434 NLVSWNAMITGYAQNGYVCKALFLFNE-MRSDHQTPDSITIVSLLQGCASTGQLHLGKWI 492

Query: 353 HAYIIKNFVALPVIV--------------------LNAVIERDVVSWNTMISAFVQNGLD 392
           H+++I+N +   ++V                     N +   D+VSW+ +I  +  +G  
Sbjct: 493 HSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKG 552

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
           +  L    +  + G   + V   ++LS+ S+    + G   +  + R       +E +  
Sbjct: 553 ETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHAC 612

Query: 451 LIDMYAKSGLIKTARQIFEKNDS 473
           ++D+ +++G ++ A  +++K  S
Sbjct: 613 VVDLLSRAGRVEEAYNLYKKKFS 635



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 79/146 (54%)

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           ++NA+I  ++  G   +    +  ML+ +V  +  T  S+L AC+ +    LG  LH   
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           +   L  + ++ +SLI+ Y+K G  + A  VF  +PE+N V +T++I  Y + G    A 
Sbjct: 96  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACS 625
           SLF  M+  GI+P ++T +++L   S
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVS 181


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/707 (32%), Positives = 379/707 (53%), Gaps = 52/707 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFV-YNSLLNMYSTCLSSLDAEMVGLKYVE 170
           VL+ CAE  ++R  KAVH   ++  F +    V +N   ++YS C               
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKC--------------- 114

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S++   C VFD M +RNV +W  ++    +   + +  + F  ML  GI P   ++ 
Sbjct: 115 ---SEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 171

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  +   L   +   +V+  +V  G  +   +FV++S + MYA+LG  + +  +F+   
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMRG--FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 229

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E N   WN MI G   N   +EA +LFV+ ++      +  T +S   AV +L ++++G+
Sbjct: 230 EHNQVSWNAMISGCTSNGLHLEAFDLFVR-MKNGACTPNMYTLVSVSKAVGKLVDVNMGK 288

Query: 351 QLHAYIIKNFVALPVIVLNAVIE-----------RDVVS-----------WNTMISAFVQ 388
           ++     +  +   V+V  A+I+           R V             WN MIS + Q
Sbjct: 289 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE--G 446
           +G   E L L  +M + G   D  T  ++ +A +  ++   G+  H  +L+ G+      
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 408

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + + D Y+K G ++  R++F++ +  +RD  +W  ++  Y+Q+ L EEA   F  M E
Sbjct: 409 VNNAIADAYSKCGFLEDVRKVFDRME--ERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 466

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
               PN  T +SVL +C  +  +E G+Q+HG   +  LD    + ++LIDMY+K G I  
Sbjct: 467 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITE 526

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF KI   + V++T +I GY QHG+ E AL LFR M+  GI+ +A+T + VL ACS+
Sbjct: 527 AGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH 586

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            G+V+EGL  F  M+  Y + P  EHY C+ D+LGRVG++ +A EF++++  E N + +W
Sbjct: 587 GGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM-VW 645

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG CR+HG+ EL E+ A+K+L +  R      +VLLSN Y E G++E+   +R  M+
Sbjct: 646 QTLLGGCRVHGNVELGEIAARKILSI--RPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 703

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           ++G++KE G SWI V G V++F S DQ+HPQ  +IY  LE L  +++
Sbjct: 704 DQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 185/634 (29%), Positives = 309/634 (48%), Gaps = 71/634 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C E R   A  +FD + +     W  +I+G   + L ++    + +M  S      D + 
Sbjct: 114 CSEFRA--ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILP--DKFA 169

Query: 110 YSSVLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           YS+++++C    +L +GK VH   + R F+    FV  SLLNMY+            L  
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQIVMRGFAT-HIFVSTSLLNMYAK-----------LGS 217

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
           +E  Y        VF+ M   N V+WN ++S       ++EA   F  M      P+  +
Sbjct: 218 IEDSY-------WVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 270

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD- 287
            V+V  A+  L D      V     +LG E   ++ V ++ I MY++ G    AR +FD 
Sbjct: 271 LVSVSKAVGKLVDVNMGKEVQNCASELGIE--GNVLVGTALIDMYSKCGSLHDARSVFDT 328

Query: 288 ---NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
              NC   NT  WN MI GY Q+    EA+EL+VQ+ + + I  D  T+ S  +A++  +
Sbjct: 329 NFINC-GVNTP-WNAMISGYSQSGCSQEALELYVQMCQ-NGITSDLYTYCSVFNAIAASK 385

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMI 383
            L  G+ +H  ++K  + L V+ +N  I                     ERD+VSW T++
Sbjct: 386 SLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLV 445

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           +A+ Q+ L +E L     M+++GF  +  T +++L + ++L   + G+Q H  L + G+ 
Sbjct: 446 TAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLD 505

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            E  +ES LIDMYAK G I  A ++F+K    + D  +W A+I+GY Q+GL+E+A   FR
Sbjct: 506 TEKCIESALIDMYAKCGSITEAGKVFDK--ISNPDIVSWTAIISGYAQHGLVEDALQLFR 563

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELG----KQLH-GFSIRYLLDQNVFVGTSLIDM 557
           +M    +  N VT+  VL AC+  G +E G    +Q+  G+ +   ++        +ID+
Sbjct: 564 RMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY----ACIIDL 619

Query: 558 YSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD-AI 615
             + G ++ A     K+P E N + + T++ G   HG  E  L    + K   I P+ + 
Sbjct: 620 LGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSA 677

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQ-QEYKIQP 648
           T+V + +     G  ++GL + ++M+ Q  K +P
Sbjct: 678 TYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 711



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 236/502 (47%), Gaps = 38/502 (7%)

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            ++V    +  G  + A  V+GL++K   E  + + + + A  +Y++   F  A  +FD 
Sbjct: 67  LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +RN   W  MI G  ++    +  + F ++L    I+ D   + + + +   L  L+L
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLN-SGILPDKFAYSAIIQSCIGLDSLEL 185

Query: 349 GQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           G+ +HA I+        FV+  ++              V N + E + VSWN MIS    
Sbjct: 186 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 245

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-- 446
           NGL  E   L   M+      +  T+ ++  A   L + ++GK+        GI  EG  
Sbjct: 246 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI--EGNV 303

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + LIDMY+K G +  AR +F+ N         WNAMI+GY+Q+G  +EA   + QM 
Sbjct: 304 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMC 363

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF-VGTSLIDMYSKSGVI 564
           ++ +T ++ T  SV  A     +++ G+ +HG  ++  LD  V  V  ++ D YSK G +
Sbjct: 364 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 423

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                VF ++ E++ V++TT++  Y Q  + E AL+ F  M+  G  P+  TF +VL +C
Sbjct: 424 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 483

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEG 680
           +    ++ G Q+  L+    K    TE   C+     DM  + G + EA +   ++    
Sbjct: 484 ASLCFLEYGRQVHGLL---CKAGLDTEK--CIESALIDMYAKCGSITEAGKVFDKISNPD 538

Query: 681 NVLEIWGSLLGSCRLHGHSELA 702
            V   W +++     HG  E A
Sbjct: 539 IV--SWTAIISGYAQHGLVEDA 558


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/649 (33%), Positives = 358/649 (55%), Gaps = 34/649 (5%)

Query: 173 YSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +SKY  +    +VF+ +  +    ++T++  Y K      A+     M    ++P   +F
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +        D K    ++G L+   + +  ++F  +  + MYA+    D A K+FD  
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLIT--NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM 208

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WNT+I G+ QN    +A+EL +++ +  +   D +T ++ L A + +  L +G
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP-DSITLVTVLPAAADVGLLMVG 267

Query: 350 QQLHAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQN 389
           + +H Y I+   A  V                    ++ + + ++ VVSWN+M+  +VQN
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL--LRHGIHFEGM 447
           G  ++ + +  +M ++G     VT+   L A ++L + + GK  H ++  L  G     M
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            S LI MY+K   +  A  IF  N+   R   +WNAMI GY QNG + EA   F +M   
Sbjct: 388 NS-LISMYSKCKRVDIASDIF--NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + P+  T+ SV+PA   +      K +HG  IR  LD+N+FV T+L+DMYSK G I+ A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  I +++ +T+  MI GYG HG+   AL LF  MK   +EP+ IT+++V+SACS++
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLVDEGL+ F  M+Q+Y ++PS +HY  + D+LGR G++ EA++F++ +     +  ++G
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI-TVYG 623

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           ++LG+C++H + E+ E  AKKL E++      GYHVLL+NIYA    W  V +VRK M +
Sbjct: 624 AMLGACKIHKNIEVGEKAAKKLFELNPDEG--GYHVLLANIYASTSKWSKVAEVRKTMEK 681

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +GL+K  GCS +++   V+ F S    HPQS +IY  LE L  E++ AG
Sbjct: 682 KGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 271/566 (47%), Gaps = 49/566 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   + G  + A ++F+ I      +++T++ G+  N+    A+    +M+        
Sbjct: 88  VSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVV 147

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            N+TY  +LK C +  +L+ GK +H   I      + F    ++NMY+ C    DA    
Sbjct: 148 YNFTY--LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY--- 202

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K+FD M  R++V+WNTI++ + +     +A+     M   G RP 
Sbjct: 203 ---------------KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPD 247

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARK 284
           +I+ V V PA + +G       ++G  ++ G ++ VN   ++++   MY++ G  + AR 
Sbjct: 248 SITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN---ISTALADMYSKCGSVETARL 304

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           IFD   ++    WN+M+ GYVQN  P +AI +F ++LE + I    VT + AL A + L 
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLG 363

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
           +L+ G+ +H ++ +  +   + V+N++I                     R  VSWN MI 
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + QNG   E L    EM+  G   DS T+ +++ A + L      K  H  ++R  +  
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+DMY+K G I  AR++F+     DR   TWNAMI GY  +GL   A   F +
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDM--ISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M +  V PN +T  SV+ AC+  G ++ G +        Y L+ ++    +++D+  ++G
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601

Query: 563 VINYAANVFAKIPEKNSVTYTTMILG 588
            I  A +    +P    +T    +LG
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAMLG 627



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 203/384 (52%), Gaps = 24/384 (6%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           N+    +  + ++++ G  + A ++F+   ++   +++TM+ GY +N+  +E    F+  
Sbjct: 79  NEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS-SLETALAFLCR 137

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           +  D++      F   L       +L  G+++H  +I N  A  V  +  V+        
Sbjct: 138 MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ 197

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                       ERD+VSWNT+I+ F QNG   + L LV  MQ +G   DS+T+  +L A
Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257

Query: 421 ASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
           A+++    VGK  H Y +R G      + + L DMY+K G ++TAR IF+  D   +   
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ--KTVV 315

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +WN+M+ GY QNG  E+A   F +MLE  + P  VTI   L AC  +G++E GK +H F 
Sbjct: 316 SWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFV 375

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            +  L  ++ V  SLI MYSK   ++ A+++F  +  +  V++  MILGY Q+G    AL
Sbjct: 376 DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 600 SLFRSMKGCGIEPDAITFVAVLSA 623
           + F  MK  G++PD+ T V+V+ A
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPA 459



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 27/217 (12%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +S   +  R  +A  +F+++   T V WN +I+G+  N    EA+  +S+MK  S 
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK--SL 444

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D++T  SV+ A AE    R  K +H   IR   + + FV  +L++MYS C      
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC------ 498

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                           +  K+FD +  R+V+ WN ++  Y        A+  F  M +  
Sbjct: 499 ------------GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546

Query: 222 IRPSTISFVNVFPALSSLG-------DYKSADVVYGL 251
           + P+ I++++V  A S  G        +KS    YGL
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGL 583



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 11/173 (6%)

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           L ++++F  T L+ ++SK G IN AA VF  I +K    Y TM+ GY ++   E AL+  
Sbjct: 77  LYNEHLF-QTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M+   ++P    F  +L  C     +  G +I   +        +      V +M  +
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFAMTGVVNMYAK 194

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
             ++ +AY+    + E    L  W +++     +G        AKK LE+  R
Sbjct: 195 CRQIDDAYKMFDRMPERD--LVSWNTIIAGFSQNG-------FAKKALELVLR 238


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 390/749 (52%), Gaps = 49/749 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ ++    V W  ++ G+  N L  EA+ LY QM ++    +   Y  SSVL +C
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT--PYVLSSVLSSC 153

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +      G+ +H    +       FV N+++ +Y  C S                  + 
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS------------------FR 195

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M  R+ V +NT++S + +      A+  F  M   G+ P  ++  ++  A +
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLGD +    ++  L K G    +D  +  S + +Y + G  + A  IF++    N  +W
Sbjct: 256 SLGDLQKGTQLHSYLFKAG--ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  + Q N   ++ ELF Q ++   I  +  T+   L   +  +E+DLG+Q+H+  +
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K       +V+  +I              VL  + E+DVVSW +MI+ +VQ+    + L 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQK G   D++ + + +S  + +     G Q HA +   G   +  + + L+++YA
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G I+ A   FE+ +   +D+ TWN +++G+ Q+GL EEA   F +M +  V  NV T 
Sbjct: 493 RCGRIREAFSSFEEIE--HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S L A   +  I+ GKQ+H   I+        VG +LI +Y K G    A   F+++ E
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE 610

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL LF  MK  GI+P+ +TF+ VL+ACS+ GLV+EGL  
Sbjct: 611 RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSY 670

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  EY I+P  +HY CV D+ GR G++  A +F++E+    + + +W +LL +C++H
Sbjct: 671 FKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM-VWRTLLSACKVH 729

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E  AK LLE++  +S    +VLLSN YA    W N D+VRK MR+RG+RKE G 
Sbjct: 730 KNIEVGEFAAKHLLELEPHDSAS--YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGR 787

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SWI+V   V+ F   D+ HP + +IY  L
Sbjct: 788 SWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 229/471 (48%), Gaps = 32/471 (6%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V +  I +Y++ G    AR++F+    R+   W  M+ GY QN    EA+ L+ Q +   
Sbjct: 79  VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRA 137

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
            +V       S LS+ ++ +    G+ +HA   K+     + V NAVI            
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    RD V++NT+IS   Q G  +  L +  EMQ  G   D VT+++LL+A ++L
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   G Q H+YL + GI  +  ME  L+D+Y K G ++TA  IF  N S   +   WN 
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF--NSSDRTNVVLWNL 315

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+  + Q   L ++F  F QM    + PN  T   +L  C     I+LG+Q+H  S++  
Sbjct: 316 MLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG 375

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + +++V   LIDMYSK G +  A  V   + EK+ V++T+MI GY QH   + AL+ F+
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFK 435

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGR 662
            M+ CGI PD I   + +S C+    + +GLQI   +    Y    S   +  + ++  R
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYAR 493

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            G++ EA+   +E+  +  +   W  L+        S L E   K  + MD
Sbjct: 494 CGRIREAFSSFEEIEHKDEI--TWNGLVSG---FAQSGLHEEALKVFMRMD 539



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 36/257 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A   F+ I     + WN ++ GF  + L  EA+ ++ +M +S      + +T+ S
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG--VKHNVFTFVS 552

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L A A    ++ GK +H   I+   +    V N+L+++Y  C S  DA+M         
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM--------- 603

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                     F  M  RN V+WNTI++   +  R +EA+  F  M + GI+P+ ++F+ V
Sbjct: 604 ---------EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGV 654

Query: 233 FPALSSLG-------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             A S +G        +KS    YG+  +       D +     IF  A  G  D A+K 
Sbjct: 655 LAACSHVGLVEEGLSYFKSMSDEYGIRPR------PDHYACVIDIFGRA--GQLDRAKKF 706

Query: 286 FDNC-LERNTEVWNTMI 301
            +   +  +  VW T++
Sbjct: 707 IEEMPIAADAMVWRTLL 723



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQ 534
           R  A+    +AG+  +    +    F      +     +  A  L AC   G   ++  +
Sbjct: 4   RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  ++   L +   VG  LID+YSK+G++  A  VF ++  +++V++  M+ GY Q+G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            E AL L+R M   G+ P      +VLS+C+ A L  +G
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/710 (32%), Positives = 380/710 (53%), Gaps = 52/710 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRC-FSNPSRFV-YNSLLNMYSTCLSSLDAEMVGLKYVE 170
           VL+ CAE  ++R  KAVH   ++  F +    V +N   ++YS C               
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKC--------------- 168

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S++   C VFD M +RNV +W  ++    +   + +  + F  ML  GI P   ++ 
Sbjct: 169 ---SEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYS 225

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  +   L   +   +V+  +V  G  +   +FV++S + MYA+LG  + +  +F+   
Sbjct: 226 AIIQSCIGLDSLELGKMVHAQIVMRG--FATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT 283

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E N   WN MI G   N   +EA +LFV+ ++      +  T +S   AV +L ++++G+
Sbjct: 284 EHNQVSWNAMISGCTSNGLHLEAFDLFVR-MKNGACTPNMYTLVSVSKAVGKLVDVNMGK 342

Query: 351 QLHAYIIKNFVALPVIVLNAVIE-----------RDVVS-----------WNTMISAFVQ 388
           ++     +  +   V+V  A+I+           R V             WN MIS + Q
Sbjct: 343 EVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE--G 446
           +G   E L L  +M + G   D  T  ++ +A +  ++   G+  H  +L+ G+      
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 462

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + + D Y+K G ++  R++F++ +  +RD  +W  ++  Y+Q+ L EEA   F  M E
Sbjct: 463 VNNAIADAYSKCGFLEDVRKVFDRME--ERDIVSWTTLVTAYSQSSLGEEALATFCLMRE 520

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
               PN  T +SVL +C  +  +E G+Q+HG   +  LD    + ++LIDMY+K G I  
Sbjct: 521 EGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITE 580

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF KI   + V++T +I GY QHG+ E AL LFR M+  GI+ +A+T + VL ACS+
Sbjct: 581 AGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH 640

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            G+V+EGL  F  M+  Y + P  EHY C+ D+LGRVG++ +A EF++++  E N + +W
Sbjct: 641 GGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEM-VW 699

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG CR+HG+ EL E+ A+K+L +  R      +VLLSN Y E G++E+   +R  M+
Sbjct: 700 QTLLGGCRVHGNVELGEIAARKILSI--RPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 757

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++G++KE G SWI V G V++F S DQ+HPQ  +IY  LE L  +++  G
Sbjct: 758 DQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMG 807



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 183/633 (28%), Positives = 306/633 (48%), Gaps = 69/633 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C E R   A  +FD + +     W  +I+G   + L ++    + +M  S      D + 
Sbjct: 168 CSEFRA--ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILP--DKFA 223

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           YS+++++C    +L +GK VH   +        FV  SLLNMY+            L  +
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAK-----------LGSI 272

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           E  Y        VF+ M   N V+WN ++S       ++EA   F  M      P+  + 
Sbjct: 273 EDSY-------WVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTL 325

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-- 287
           V+V  A+  L D      V     +LG E   ++ V ++ I MY++ G    AR +FD  
Sbjct: 326 VSVSKAVGKLVDVNMGKEVQNCASELGIE--GNVLVGTALIDMYSKCGSLHDARSVFDTN 383

Query: 288 --NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
             NC   NT  WN MI GY Q+    EA+EL+VQ+ + + I  D  T+ S  +A++  + 
Sbjct: 384 FINC-GVNTP-WNAMISGYSQSGCSQEALELYVQMCQ-NGITSDLYTYCSVFNAIAASKS 440

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMIS 384
           L  G+ +H  ++K  + L V+ +N  I                     ERD+VSW T+++
Sbjct: 441 LQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVT 500

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           A+ Q+ L +E L     M+++GF  +  T +++L + ++L   + G+Q H  L + G+  
Sbjct: 501 AYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDT 560

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           E  +ES LIDMYAK G I  A ++F+K    + D  +W A+I+GY Q+GL+E+A   FR+
Sbjct: 561 EKCIESALIDMYAKCGSITEAGKVFDK--ISNPDIVSWTAIISGYAQHGLVEDALQLFRR 618

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELG----KQLH-GFSIRYLLDQNVFVGTSLIDMY 558
           M    +  N VT+  VL AC+  G +E G    +Q+  G+ +   ++        +ID+ 
Sbjct: 619 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHY----ACIIDLL 674

Query: 559 SKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD-AIT 616
            + G ++ A     K+P E N + + T++ G   HG  E  L    + K   I P+ + T
Sbjct: 675 GRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVE--LGEIAARKILSIRPEYSAT 732

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQ-QEYKIQP 648
           +V + +     G  ++GL + ++M+ Q  K +P
Sbjct: 733 YVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 765



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 224/469 (47%), Gaps = 36/469 (7%)

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            ++V    +  G  + A  V+GL++K   E  + + + + A  +Y++   F  A  +FD 
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +RN   W  MI G  ++    +  + F ++L    I+ D   + + + +   L  L+L
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLN-SGILPDKFAYSAIIQSCIGLDSLEL 239

Query: 349 GQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           G+ +HA I+        FV+  ++              V N + E + VSWN MIS    
Sbjct: 240 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 299

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-- 446
           NGL  E   L   M+      +  T+ ++  A   L + ++GK+        GI  EG  
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI--EGNV 357

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + LIDMY+K G +  AR +F+ N         WNAMI+GY+Q+G  +EA   + QM 
Sbjct: 358 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMC 417

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF-VGTSLIDMYSKSGVI 564
           ++ +T ++ T  SV  A     +++ G+ +HG  ++  LD  V  V  ++ D YSK G +
Sbjct: 418 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 477

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                VF ++ E++ V++TT++  Y Q  + E AL+ F  M+  G  P+  TF +VL +C
Sbjct: 478 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 537

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEA 669
           +    ++ G Q+  L+    K    TE   C+     DM  + G + EA
Sbjct: 538 ASLCFLEYGRQVHGLL---CKAGLDTEK--CIESALIDMYAKCGSITEA 581


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 390/749 (52%), Gaps = 49/749 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ ++    V W  ++ G+  N L  EA+ LY QM ++    +   Y  SSVL +C
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT--PYVLSSVLSSC 153

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +      G+ +H    +       FV N+++ +Y  C S                  + 
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS------------------FR 195

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M  R+ V +NT++S + +      A+  F  M   G+ P  ++  ++  A +
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLGD +    ++  L K G    +D  +  S + +Y + G  + A  IF++    N  +W
Sbjct: 256 SLGDLQKGTQLHSYLFKAG--ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  + Q N   ++ ELF Q ++   I  +  T+   L   +  +E+DLG+Q+H+  +
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K       +V+  +I              VL  + E+DVVSW +MI+ +VQ+    + L 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQK G   D++ + + +S  + +     G Q HA +   G   +  + + L+++YA
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G I+ A   FE+ +   +D+ TWN +++G+ Q+GL EEA   F +M +  V  NV T 
Sbjct: 493 RCGRIREAFSSFEEIEH--KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S L A   +  I+ GKQ+H   I+        VG +LI +Y K G    A   F+++ E
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE 610

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL LF  MK  GI+P+ +TF+ VL+ACS+ GLV+EGL  
Sbjct: 611 RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSY 670

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  EY I+P  +HY CV D+ GR G++  A +F++E+    + + +W +LL +C++H
Sbjct: 671 FKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM-VWRTLLSACKVH 729

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E  AK LLE++  +S    +VLLSN YA    W N D+VRK MR+RG+RKE G 
Sbjct: 730 KNIEVGEFAAKHLLELEPHDSAS--YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGR 787

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SWI+V   V+ F   D+ HP + +IY  L
Sbjct: 788 SWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/471 (30%), Positives = 229/471 (48%), Gaps = 32/471 (6%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V +  I +Y++ G    AR++F+    R+   W  M+ GY QN    EA+ L+ Q +   
Sbjct: 79  VGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRA 137

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
            +V       S LS+ ++ +    G+ +HA   K+     + V NAVI            
Sbjct: 138 GVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLA 197

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    RD V++NT+IS   Q G  +  L +  EMQ  G   D VT+++LL+A ++L
Sbjct: 198 ERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASL 257

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   G Q H+YL + GI  +  ME  L+D+Y K G ++TA  IF  N S   +   WN 
Sbjct: 258 GDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF--NSSDRTNVVLWNL 315

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+  + Q   L ++F  F QM    + PN  T   +L  C     I+LG+Q+H  S++  
Sbjct: 316 MLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTG 375

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + +++V   LIDMYSK G +  A  V   + EK+ V++T+MI GY QH   + AL+ F+
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFK 435

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGR 662
            M+ CGI PD I   + +S C+    + +GLQI   +    Y    S   +  + ++  R
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYAR 493

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            G++ EA+   +E+  +  +   W  L+        S L E   K  + MD
Sbjct: 494 CGRIREAFSSFEEIEHKDEI--TWNGLVSG---FAQSGLHEEALKVFMRMD 539



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 36/257 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A   F+ I     + WN ++ GF  + L  EA+ ++ +M +S      + +T+ S
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG--VKHNVFTFVS 552

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L A A    ++ GK +H   I+   +    V N+L+++Y  C S  DA+M         
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM--------- 603

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                     F  M  RN V+WNTI++   +  R +EA+  F  M + GI+P+ ++F+ V
Sbjct: 604 ---------EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGV 654

Query: 233 FPALSSLG-------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             A S +G        +KS    YG+  +       D +     IF  A  G  D A+K 
Sbjct: 655 LAACSHVGLVEEGLSYFKSMSDEYGIRPR------PDHYACVIDIFGRA--GQLDRAKKF 706

Query: 286 FDNC-LERNTEVWNTMI 301
            +   +  +  VW T++
Sbjct: 707 IEEMPIAADAMVWRTLL 723



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQ 534
           R  A+    +AG+  +    +    F      +     +  A  L AC   G   ++  +
Sbjct: 4   RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  ++   L +   VG  LID+YSK+G++  A  VF ++  +++V++  M+ GY Q+G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            E AL L+R M   G+ P      +VLS+C+ A L  +G
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 237/743 (31%), Positives = 379/743 (51%), Gaps = 87/743 (11%)

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
           T   WN +I   V      + + LY +M++       D+YT+  VLKAC E  + R G +
Sbjct: 90  TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP--DHYTFPFVLKACGEIPSFRCGAS 147

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VH          + FV N L++MY  C +  +A                   +VFD MR 
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR------------------QVFDEMRE 189

Query: 189 RNV---VAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
           R V   V+WN+IV+ Y++    + A++ F RM   +GIRP  +S VNV PA +S+G +  
Sbjct: 190 RGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR 249

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              V+G  ++ G     D+FV ++ + MYA+ G  + A K+F+    ++   WN M+ GY
Sbjct: 250 GKQVHGYALRSG--LFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 307

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            Q     +A+ LF ++ E                                          
Sbjct: 308 SQIGRFDDALGLFEKIRE------------------------------------------ 325

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                  IE +VV+W+ +I+ + Q GL  E L +  +M+  G   + VT+ +LLS  +  
Sbjct: 326 -----EKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALA 380

Query: 425 RNQDVGKQTHAYLLRHGIHFEGME--------SYLIDMYAKSGLIKTARQIFEKNDSGDR 476
                GK+TH + ++  ++ +  +        + LIDMY+K    K AR +F+     DR
Sbjct: 381 GTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDR 440

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN--VTPNVVTIASVLPACNPMGNIELGKQ 534
              TW  +I G  Q+G   EA   F QML+ +  V PN  TI+  L AC  +G +  G+Q
Sbjct: 441 SVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQ 500

Query: 535 LHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           +H + +R   +   +FV   LIDMYSKSG ++ A  VF  + ++N V++T+++ GYG HG
Sbjct: 501 IHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHG 560

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
             E AL +F  M+  G+ PD +TFV VL ACS++G+VD+G+  F+ M +++ + P  EHY
Sbjct: 561 RGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 620

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ D+L R G++ EA E ++ +  +     +W +LL +CR++ + EL E  A +LLE++
Sbjct: 621 ACMVDLLSRAGRLDEAMELIRGMPMKPTP-AVWVALLSACRVYANVELGEYAANQLLELE 679

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
           + N   G + LLSNIYA    W++V ++R  M+  G++K  GCSW+        F + D 
Sbjct: 680 SGND--GSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDW 737

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP S +IY++L  L   ++  G
Sbjct: 738 SHPMSQQIYDLLRDLMQRIKALG 760



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 134/544 (24%), Positives = 227/544 (41%), Gaps = 122/544 (22%)

Query: 58  ARQLFDSITRPTT---VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           ARQ+FD +        V WN+I+  ++       A+ ++ +M +       D  +  +VL
Sbjct: 180 ARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP-DAVSLVNVL 238

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            ACA       GK VH + +R       FV N++++MY+ C    +A             
Sbjct: 239 PACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN------------ 286

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY--------------------------- 207
                 KVF+ M+ ++VV+WN +V+ Y +  R+                           
Sbjct: 287 ------KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIA 340

Query: 208 --------VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL---- 255
                    EA+  FR M   G  P+ ++ V++    +  G        +   +K     
Sbjct: 341 GYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNL 400

Query: 256 -GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVE 312
             ++  +DL V ++ I MY++      AR +FD     +R+   W  +IGG  Q+    E
Sbjct: 401 DENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANE 460

Query: 313 AIELFVQVLELDEIVFDDV-TFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALP 364
           A+ELF Q+L+ D  V  +  T   AL A ++L  L  G+Q+HAY+++N       FVA  
Sbjct: 461 ALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANC 520

Query: 365 VI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I              V + + +R+ VSW ++++ +  +G  +E L + YEMQK G + D
Sbjct: 521 LIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPD 580

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFE 469
            VT   +L A S           H+ ++  GI +F GM           G++  A     
Sbjct: 581 GVTFVVVLYACS-----------HSGMVDQGINYFNGMNKDF-------GVVPGAEH--- 619

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                      +  M+   ++ G L+EA    R M    + P      ++L AC    N+
Sbjct: 620 -----------YACMVDLLSRAGRLDEAMELIRGM---PMKPTPAVWVALLSACRVYANV 665

Query: 530 ELGK 533
           ELG+
Sbjct: 666 ELGE 669



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 184/432 (42%), Gaps = 50/432 (11%)

Query: 51  QEGRPHLARQLFDSITRP----TTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTS 104
           Q GR   A  LF+ I         V W+ +I G+    L +EA+ ++ QM+   S P   
Sbjct: 309 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEP--- 365

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-------FVYNSLLNMYSTCLS 157
            +  T  S+L  CA    L  GK  HCH I+   N           V N+L++MYS C S
Sbjct: 366 -NVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
              A            + +DL+       + R+VV W  ++    +     EA+  F  M
Sbjct: 425 PKAAR-----------AMFDLI-----PPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 468

Query: 218 LRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           L+    + P+  +      A + LG  +    ++  +++   E    LFVA+  I MY++
Sbjct: 469 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM-LFVANCLIDMYSK 527

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  D AR +FDN  +RN   W +++ GY  +    EA+++F ++ ++  +V D VTF+ 
Sbjct: 528 SGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVG-LVPDGVTFVV 586

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G      + K+F  +P              +  M+    + G  DE 
Sbjct: 587 VLYACSHSGMVDQGINYFNGMNKDFGVVP----------GAEHYACMVDLLSRAGRLDEA 636

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           + L+  M  +          ALLSA     N ++G+     LL      +G  + L ++Y
Sbjct: 637 MELIRGMPMKP---TPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 693

Query: 456 AKSGLIKTARQI 467
           A +   K   +I
Sbjct: 694 ANARCWKDVARI 705



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 6/207 (2%)

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           H  LL  G+  +   +++I MY        A  +  +          WN +I      G 
Sbjct: 49  HQQLLVQGLPHD--PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGF 106

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           LE+    +R+M      P+  T   VL AC  + +   G  +H        + NVFVG  
Sbjct: 107 LEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG 166

Query: 554 LIDMYSKSGVINYAANVFAKIPEK---NSVTYTTMILGYGQHGMSERALSLFRSM-KGCG 609
           L+ MY + G    A  VF ++ E+   + V++ +++  Y Q G S RA+ +F  M +  G
Sbjct: 167 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 226

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQI 636
           I PDA++ V VL AC+  G    G Q+
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQV 253


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/722 (33%), Positives = 383/722 (53%), Gaps = 55/722 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           ++  +L  C   ++L+ GKA+H   +R  S  S ++ NSL+N+Y+ C S + A++V    
Sbjct: 12  SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV---- 67

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK--TERYVEAVRQFRMMLRMGIRPST 226
                         F+++  ++VV+WN +++ Y +  T  Y   +  F+ M      P+ 
Sbjct: 68  --------------FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNG 113

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  VF A SS  +       + L +K  + Y  D+FV SS I MY ++GC   ARK+F
Sbjct: 114 HTFSGVFTAASSSPETFGGLQAHALAIKTSNFY--DVFVGSSLINMYCKIGCMLDARKVF 171

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   ERNT  W T+I GY       EA ELF  ++  +E   D   + S LSA++    +
Sbjct: 172 DTIPERNTVSWATIISGYAMERMAFEAWELF-XLMRREEGAHDKFIYTSVLSALTVPDLV 230

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G+Q+H   +KN +     V NA++                    ++D ++W+ MI+ +
Sbjct: 231 HYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGY 290

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG----I 442
            Q G   E L L Y M   G      T   +++A S++   + GKQ H Y L+ G    I
Sbjct: 291 AQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI 350

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           +F    + L+DMYAK G +  AR+ F+     + D   W +MI+GY QNG  E A   + 
Sbjct: 351 YFM---TALVDMYAKCGSLVDARKGFDYLK--EPDIVLWTSMISGYAQNGENETALTLYC 405

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M    + P+ +T+ASVL AC+ +  +E GKQ+H  +I+Y     V +G++L  MY+K G
Sbjct: 406 RMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCG 465

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +     VF ++P ++ +T+  MI G  Q+G   +AL LF  ++    +PD +TFV VLS
Sbjct: 466 SLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLS 525

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+ GLV+ G   F +M  E+ I P  EHY C+ D+L R GK+ E  EF+ E     + 
Sbjct: 526 ACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFI-ESATIDHG 584

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W  LLG+CR + + EL     +KL+E+ ++ S    ++LLS+IY   G  ++V++VR
Sbjct: 585 MCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSA--YILLSSIYTALGRSDDVERVR 642

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           + M+ RG+ KE GCSWI++   V+ F   DQ HPQ  KI   L RL   M++   ++  +
Sbjct: 643 RLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFND 702

Query: 803 SN 804
           +N
Sbjct: 703 TN 704



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 250/536 (46%), Gaps = 57/536 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLK 115
           A+ +F+SIT    V WN +I G+     + Y  ++ L+ +M+  +  T  + +T+S V  
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAEN--TLPNGHTFSGVFT 121

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A + +     G   H   I+  +    FV +SL+NMY      LDA              
Sbjct: 122 AASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDAR------------- 168

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFDT+  RN V+W TI+S Y       EA   F +M R         + +V  A
Sbjct: 169 -----KVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSA 223

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L+          ++ L +K G   +    V ++ + MY + GC D A K F+   +++  
Sbjct: 224 LTVPDLVHYGKQIHCLALKNGLLSIAS--VGNALVTMYGKCGCLDDALKTFELSGDKDDI 281

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI GY Q     EA+ LF   + L+     + TF+  ++A S +  L+ G+Q+H Y
Sbjct: 282 TWSAMITGYAQAGDSHEALNLFYN-MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGY 340

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            +K      +  + A++                    E D+V W +MIS + QNG ++  
Sbjct: 341 SLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETA 400

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L   MQ +  M   +T+ ++L A S+L   + GKQ HA  +++G   E  + S L  M
Sbjct: 401 LTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTM 460

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G ++    +F +  S  RD  TWNAMI+G +QNG   +A   F ++      P+ V
Sbjct: 461 YAKCGSLEDGNLVFRRMPS--RDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYV 518

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVIN 565
           T  +VL AC+ MG +E GK       R +LD+   V        ++D+ S++G ++
Sbjct: 519 TFVNVLSACSHMGLVERGK----VYFRMMLDEFGIVPRVEHYACMVDILSRAGKLH 570



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 223/497 (44%), Gaps = 50/497 (10%)

Query: 16  TATPPPPQL---PQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTV 71
           TA    P+     Q H+L+          + S L  + C+ G    AR++FD+I    TV
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
            W TII G+    + +EA  L+  M++     + D + Y+SVL A      +  GK +HC
Sbjct: 181 SWATIISGYAMERMAFEAWELFXLMRREEG--AHDKFIYTSVLSALTVPDLVHYGKQIHC 238

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             ++        V N+L+ MY  C    DA    LK  E+   K D              
Sbjct: 239 LALKNGLLSIASVGNALVTMYGKCGCLDDA----LKTFELSGDKDD-------------- 280

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           + W+ +++ Y +     EA+  F  M   G +PS  +FV V  A S +G  +    ++G 
Sbjct: 281 ITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGY 340

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +K G  Y   ++  ++ + MYA+ G    ARK FD   E +  +W +MI GY QN    
Sbjct: 341 SLKAG--YECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENE 398

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------ 365
            A+ L+ + ++++ I+  ++T  S L A S L  L+ G+Q+HA  IK   +L V      
Sbjct: 399 TALTLYCR-MQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSAL 457

Query: 366 --------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                         +V   +  RD+++WN MIS   QNG   + L L  E++      D 
Sbjct: 458 STMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDY 517

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
           VT   +LSA S++   + GK     +L        +E Y  ++D+ +++G +   ++  E
Sbjct: 518 VTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIE 577

Query: 470 KNDSGDRDQATWNAMIA 486
            + + D     W  ++ 
Sbjct: 578 -SATIDHGMCLWRILLG 593



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P   +   +L  C    +++ GK +H   +R     +V++  SL+++Y+K G I  A  V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERA--LSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           F  I  K+ V++  +I GY Q G    +  + LF+ M+     P+  TF  V +A S + 
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 629 LVDEGLQIFDL 639
               GLQ   L
Sbjct: 128 ETFGGLQAHAL 138


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 242/764 (31%), Positives = 396/764 (51%), Gaps = 51/764 (6%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            GR   A  LF  +     V WN +I G        EAI  +  M+K+   ++    T  S
Sbjct: 275  GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKST--RSTLGS 332

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL A A    L  G  VH   ++   + + +V +SL++MY+ C                 
Sbjct: 333  VLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC----------------- 375

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              K +   KVFDT+  +NVV WN ++  YV+     E +  F  M   G  P   ++ ++
Sbjct: 376  -GKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSI 434

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              A + L        ++ +++K  +++ ++LFV ++ + MYA+ G  + AR+ F+    R
Sbjct: 435  LSACACLKYLDLGHQLHSVIIK--NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNR 492

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            +   WN +I GYVQ    VEA  LF + + L  I+ D+V+  S LSA + ++ L+ G+Q+
Sbjct: 493  DNVSWNVIIVGYVQEEDEVEAFHLFRR-MNLLGILPDEVSLASILSACASVRGLEQGKQV 551

Query: 353  HAYIIKN---------------FVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLD 392
            H   +K                +     I     +L  + ER VVS N +I+ + Q  L+
Sbjct: 552  HCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE 611

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF--EGMESY 450
             + + L  +M  +G     +T  +LL A    +  ++G+Q H+ +L+ G+    E +   
Sbjct: 612  -QAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVS 670

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            L+ MY  S     A  +F +  S  +    W AMI+G +QN     A   +++M   NV 
Sbjct: 671  LLGMYMNSLRTTDASVLFSEF-SNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVL 729

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            P+  T  S L AC  + +I+ G + H        D +    ++L+DMY+K G +  +  V
Sbjct: 730  PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQV 789

Query: 571  FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  K  V ++ +MI+G+ ++G +E AL +F  MK   + PD +TF+ VL+ACS++G 
Sbjct: 790  FKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGR 849

Query: 630  VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            V EG  IFD+M   Y +QP  +H  C+ D+LGR G + EA EF+ +L  E +  ++W ++
Sbjct: 850  VSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDA-KVWATM 908

Query: 690  LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
            LG+CR+HG     +  A+KL+E++ +NS P  +VLLSNIYA  GNW+ V+ +R+EMRE+G
Sbjct: 909  LGACRIHGDDIRGQQAAEKLIELEPQNSSP--YVLLSNIYAASGNWDEVNTLRREMREKG 966

Query: 750  LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            ++K  GCSWI VG   N F + D+ H  + +I  +L+ L   MR
Sbjct: 967  VKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMR 1010



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 212/723 (29%), Positives = 341/723 (47%), Gaps = 95/723 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A + F  +     + WN+I+        P+  +  +  +  S  +   + +T++ VL +C
Sbjct: 113 AERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWP--NEFTFAIVLSSC 170

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE------- 170
           A    ++ G+ VHC+ ++       +   +L+ MY+ C    DA  +    VE       
Sbjct: 171 ARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWT 230

Query: 171 -----------------------------------------VDYSKYDLVCKVFDTMRRR 189
                                                    VD  + D    +F  M  R
Sbjct: 231 SMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNR 290

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           NVVAWN ++S + K    VEA+  F+ M + GI+ +  +  +V  A++SL     A + +
Sbjct: 291 NVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASL-----AALDF 345

Query: 250 GLLVK---LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
           GLLV    L     ++++V SS + MYA+ G  + A+K+FD   E+N  +WN M+GGYVQ
Sbjct: 346 GLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405

Query: 307 NNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           N +  E +ELF     +    F  DD T+ S LSA + L+ LDLG QLH+ IIKN  A  
Sbjct: 406 NGYANEVMELF---FNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASN 462

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + V NA+++                    RD VSWN +I  +VQ   + E   L   M  
Sbjct: 463 LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLI 461
            G + D V++ ++LSA +++R  + GKQ H   ++ G     + G  S LIDMYAK G I
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSG--SSLIDMYAKCGAI 580

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
            +A +I       +R   + NA+IAGY Q   LE+A   FR ML   +    +T AS+L 
Sbjct: 581 DSAHKILACMP--ERSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLD 637

Query: 522 ACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNS 579
           AC+    + LG+Q+H   ++  L   + F+G SL+ MY  S     A+ +F++    K++
Sbjct: 638 ACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSA 697

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V +T MI G  Q+  S  AL L++ M+ C + PD  TFV+ L AC+    + +G +   L
Sbjct: 698 VVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSL 757

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           +               + DM  + G V  + +  KE+  + +V+  W S++     +G++
Sbjct: 758 IFHT-GFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVIS-WNSMIVGFAKNGYA 815

Query: 700 ELA 702
           E A
Sbjct: 816 EDA 818



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 281/575 (48%), Gaps = 50/575 (8%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + G+   A+++FD++     V+WN ++ G+V N    E + L+  MK    Y 
Sbjct: 367 SLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYP 426

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D++TYSS+L ACA  + L +G  +H   I+     + FV N+L++MY+   +  DA  
Sbjct: 427 --DDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDAR- 483

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            + F+ +R R+ V+WN I+  YV+ E  VEA   FR M  +GI 
Sbjct: 484 -----------------QQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGIL 526

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P  +S  ++  A +S+   +    V+ L VK G E    L+  SS I MYA+ G  D A 
Sbjct: 527 PDEVSLASILSACASVRGLEQGKQVHCLSVKTGQE--TKLYSGSSLIDMYAKCGAIDSAH 584

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           KI     ER+    N +I GY Q N   +A+ LF  +L ++ I   ++TF S L A  + 
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDML-VEGINSTEITFASLLDACHEQ 642

Query: 344 QELDLGQQLHAYIIK-------NF--VALPVIVLNAVIERD-------------VVSWNT 381
           Q+L+LG+Q+H+ I+K        F  V+L  + +N++   D              V W  
Sbjct: 643 QKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTA 702

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MIS   QN      L L  EM+    + D  T  + L A + + +   G +TH+ +   G
Sbjct: 703 MISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTG 762

Query: 442 IHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              + +  S L+DMYAK G +K++ Q+F K  S  +D  +WN+MI G+ +NG  E+A   
Sbjct: 763 FDSDELTSSALVDMYAKCGDVKSSMQVF-KEMSRKKDVISWNSMIVGFAKNGYAEDALRV 821

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYS 559
           F +M + +VTP+ VT   VL AC+  G +  G+ +    +  Y +         ++D+  
Sbjct: 822 FDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLG 881

Query: 560 KSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG 593
           + G +  A     K+  E ++  + TM+     HG
Sbjct: 882 RWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHG 916



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 154/511 (30%), Positives = 261/511 (51%), Gaps = 33/511 (6%)

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           K  +VDY++     + F  +  ++++AWN+I+S + K       V+ F ++   G+ P+ 
Sbjct: 106 KCADVDYAE-----RAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNE 160

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  V  + + L   K    V+  +VK+G E ++  +   + I MYA+      AR IF
Sbjct: 161 FTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESIS--YCEGALIGMYAKCNFLTDARSIF 218

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D  +E +   W +MIGGY++   P EA+++F ++ ++ +   D V F++ ++A   L  L
Sbjct: 219 DGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP-DQVAFVTVINAYVDLGRL 277

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           D    L       F  +P         R+VV+WN MIS   + G   E +     M+K G
Sbjct: 278 DNASDL-------FSRMP--------NRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAG 322

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTAR 465
                 T+ ++LSA ++L   D G   HA  L+ G+H    + S L+ MYAK G ++ A+
Sbjct: 323 IKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAK 382

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F+  +  +++   WNAM+ GY QNG   E    F  M      P+  T +S+L AC  
Sbjct: 383 KVFDTLN--EQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACAC 440

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  ++LG QLH   I+     N+FVG +L+DMY+KSG +  A   F  I  +++V++  +
Sbjct: 441 LKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVI 500

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL---MQQ 642
           I+GY Q      A  LFR M   GI PD ++  ++LSAC+    +++G Q+  L     Q
Sbjct: 501 IVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQ 560

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
           E K+   +     + DM  + G +  A++ +
Sbjct: 561 ETKLYSGSS----LIDMYAKCGAIDSAHKIL 587


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 245/804 (30%), Positives = 422/804 (52%), Gaps = 49/804 (6%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSIT 66
           + L  P         +L Q+H+          P   ++L     Q G    +R +F +  
Sbjct: 1   MTLYMPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHP 60

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQ-MKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
            P + +++ +I   + N+L  E + L++  ++  S  T    + Y SV++A      L +
Sbjct: 61  SPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIV 120

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ +H   ++      R +  SL+ MY       DA+                  KVFD 
Sbjct: 121 GRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAK------------------KVFDE 162

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R++V W++I+S YV+   Y E +  FR M+  GIRP ++  ++V  A   +G  + A
Sbjct: 163 MCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLA 222

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             V+G +++ G   V D  +++S I MY++ G    A+++F+   +R+T  W +MI  Y 
Sbjct: 223 KSVHGYVMREG--MVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYN 280

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL-- 363
           QN    EA+++F++ ++  E+  +DVT +S L++ ++L  L  G+ +H ++++N + +  
Sbjct: 281 QNECFEEALDVFIK-MQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTG 339

Query: 364 ----PVIV---------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
               P ++               L+++   ++VSWNT+IS + + GL+DE +     M  
Sbjct: 340 LDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVA 399

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           +G M DS ++ + +SA+++  +   G+Q H ++++ G   E +++ L+DMY+K G   +A
Sbjct: 400 KGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSA 459

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             IF  N    +    WN MI G++QNG+  EA   F +M ++ +  N VT  S + AC+
Sbjct: 460 YTIF--NKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACS 517

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G ++ GK +H   I      ++++ T+L+DMY+K G +  A  VF  I EK+ V+++T
Sbjct: 518 NLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWST 577

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI  +G HG    A SLF  M    I+P+ +TF+ +LSAC +AG V EG   F+ M+  Y
Sbjct: 578 MIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYY 637

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P+ EH+  + D+L R G +  AYE +K +        IWG+LL  CR++G  ++ E 
Sbjct: 638 GIVPNVEHFASIVDLLSRAGDINGAYEIIKSI-RTPVAASIWGALLNGCRIYGRMDMIEY 696

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           +A++L  + T ++  GY+ LLSNIYAE GNW    KVR +M   GL+K  G S +++   
Sbjct: 697 IAEELGGISTDDT--GYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRK 754

Query: 765 VNRFASKDQEHPQSHKIYEMLERL 788
           + RF S D    Q  +I   LE  
Sbjct: 755 IYRFGSGDTSEWQMKEICMFLENF 778


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/785 (30%), Positives = 407/785 (51%), Gaps = 52/785 (6%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITR--PTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           TI S   ++    +P L   +F ++++  PT    N+ II F+C    Y+  L       
Sbjct: 96  TIHSVFRRMYSYVKPSLQPAIFSNLSKELPT----NSYII-FLCKQHHYKEALEAFDFHL 150

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
            +  +  +  TY+S++ ACA  R+L   K +H H ++    PS  + N ++NMY  C S 
Sbjct: 151 KNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSM 210

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            DA                   KVFDTM+  NVV+W +++S Y +  +  +A+  +  M 
Sbjct: 211 KDAR------------------KVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMT 252

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           R G  P  ++F +V  A    GD      ++  ++K  S + + L   ++ I MY   G 
Sbjct: 253 RSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIK--SWFGHHLTSQNALISMYTNFGQ 310

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F     ++   W TMI GY+Q  + VEA+ LF  +L       ++  F S  S
Sbjct: 311 IEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFS 370

Query: 339 AVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVS 378
           A S L EL+ G+Q+H   +K                     F+    +    +   D+VS
Sbjct: 371 ACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVS 430

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN +I+AF  NG  +E +    +M   G   DS+T  +LL    +    + G+Q H+Y++
Sbjct: 431 WNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIV 490

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G   E  + + L+ MY K   +  A  +F ++ S + +  +WNA+++   Q     E 
Sbjct: 491 KIGFDKEITVCNSLLTMYTKCSHLHDALNVF-RDISRNANLVSWNAILSACLQKKQEGET 549

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           F  +++M      P+ +TI ++L  C  + ++ +G Q+H +SI+  L  +V V   LIDM
Sbjct: 550 FRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDM 609

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G + +A +VF      + V+++++I+GY Q G+   AL+LFR M   G++P+ +T+
Sbjct: 610 YAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTY 669

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +  LSACS+ GLV+EG +++  M+ E+ I P+ EH+ C+ D+L R G + EA  F+++ G
Sbjct: 670 LGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSG 729

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + ++   W +LL +C+ H + ++AE  A  +L++D  NS     V+L NI+A  GNWE 
Sbjct: 730 LDADITA-WKTLLAACKTHNNVDIAERGAGNILKLDPSNSAA--MVMLCNIHASAGNWEE 786

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           V K+RK M++ G++K  G SWI+V    + F S+D  HPQ + IY MLE L  ++ + G 
Sbjct: 787 VAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGY 846

Query: 798 KTIQN 802
              Q+
Sbjct: 847 DPCQS 851


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/785 (30%), Positives = 404/785 (51%), Gaps = 50/785 (6%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+       L +P I + L  +  + G    AR++FD++    +V W  +I GF  N 
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EAI L+ +M  +  + +   Y +SSVL  C + +   +G+ +H    +  S+   +V
Sbjct: 193 YEEEAIHLFCEMHTAGIFPT--PYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ +YS   + + AE                  KVF  M+ ++ V++N+++S   + 
Sbjct: 251 CNALVTLYSRMPNFVSAE------------------KVFSKMQSKDEVSFNSLISGLAQQ 292

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
                A+  F  M R  ++P  ++  ++  A +S G     + ++  ++K G    +D+ 
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGIS--SDMI 350

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V  + + +Y        A ++F      N  +WN M+  + + ++  E+  +F Q +++ 
Sbjct: 351 VEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQ-MQIK 409

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------------------- 365
            ++ +  T+ S L   + +  LDLG+Q+H  +IK      V                   
Sbjct: 410 GLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA 469

Query: 366 -IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
            ++L  + E DVVSW  +IS + Q+ L  E L    EM  +G   D++  ++ +SA + +
Sbjct: 470 HVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGI 529

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           +  + G+Q HA     G   +  + + L+ +YA+ G IK A   FEK D+  +D  +WN 
Sbjct: 530 QALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA--KDSISWNG 587

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +I+G+ Q+G  E+A   F QM    +  +  T  S + A   + NI+ GKQ+H   I+  
Sbjct: 588 LISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRG 647

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D ++ V  +LI  Y+K G I  A   F ++PEKN V++  MI GY QHG    A++LF 
Sbjct: 648 FDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFE 707

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            MK  G  P+ +TFV VLSACS+ GLV +GL  F+ M +E+ + P   HY CV D++ R 
Sbjct: 708 KMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRA 767

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G +  A +F++E+  E +   IW +LL +C +H + E+ E  A+ LLE++  +S    +V
Sbjct: 768 GFLSRARKFIEEMPIEPDA-TIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSAT--YV 824

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSN+YA  G W+  D+ R+ MR RG++KE G SWI+V   V+ F   D+ HP + KIYE
Sbjct: 825 LLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYE 884

Query: 784 MLERL 788
            L  L
Sbjct: 885 FLAEL 889



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 166/537 (30%), Positives = 275/537 (51%), Gaps = 39/537 (7%)

Query: 167 KYVEVDYSKYDL--VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
           K V+V ++  DL  V KVF+ M  R+V +W+ I+S +++ +     +  F  M+   + P
Sbjct: 50  KLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSP 109

Query: 225 STISFVNVFPALSS--LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           + ISF +V  A S   +G  + A+ ++  ++  G   +    +++  I +YA+ G    A
Sbjct: 110 TEISFASVLRACSGHRIG-IRYAEQIHARIICHG--LLCSPIISNPLIGLYAKNGLIISA 166

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           RK+FDN   +++  W  MI G+ QN +  EAI LF + +    I      F S LS  ++
Sbjct: 167 RKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCE-MHTAGIFPTPYVFSSVLSGCTK 225

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
           ++  D+G+QLHA + K   +L   V NA++                     +D VS+N++
Sbjct: 226 IKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSL 285

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           IS   Q G  D  L L  +M++     D VTV +LLSA ++      G+Q H+Y+++ GI
Sbjct: 286 ISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGI 345

Query: 443 HFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             + + E  L+D+Y     IKTA ++F    +   +   WN M+  + +   L E+F  F
Sbjct: 346 SSDMIVEGALLDLYVNCSDIKTAHEMFLTAQT--ENVVLWNVMLVAFGKLDNLSESFRIF 403

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           RQM    + PN  T  S+L  C  +G ++LG+Q+H   I+     NV+V + LIDMY+K 
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKH 463

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ A  +   + E + V++T +I GY QH +   AL  F+ M   GI+ D I F + +
Sbjct: 464 GKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAI 523

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC---CVADMLGRVGKVVEAY-EFVK 674
           SAC+    +++G QI     Q Y +   +E       +  +  R G++ EAY EF K
Sbjct: 524 SACAGIQALNQGRQIH---AQSY-VSGYSEDLSIGNALVSLYARCGRIKEAYLEFEK 576



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 252/526 (47%), Gaps = 43/526 (8%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   GI  +  +++ +     + G       ++G ++KLG  + N+  + +  + +Y  L
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLG--FGNESVLCNKLVDVYFAL 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  D   K+F++   R+   W+ +I G+++       ++LF  ++E + +   +++F S 
Sbjct: 59  GDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIE-ENVSPTEISFASV 117

Query: 337 LSAVSQLQ-ELDLGQQLHAYII-KNFVALPVI-------------------VLNAVIERD 375
           L A S  +  +   +Q+HA II    +  P+I                   V + +  +D
Sbjct: 118 LRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKD 177

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSW  MIS F QNG ++E + L  EM   G        +++LS  + ++  DVG+Q HA
Sbjct: 178 SVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHA 237

Query: 436 YLLRHGIHFEGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            + ++G     +E+Y    L+ +Y++     +A ++F K  S  +D+ ++N++I+G  Q 
Sbjct: 238 LVFKYG---SSLETYVCNALVTLYSRMPNFVSAEKVFSKMQS--KDEVSFNSLISGLAQQ 292

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  + A   F +M    + P+ VT+AS+L AC   G +  G+QLH + I+  +  ++ V 
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +L+D+Y     I  A  +F     +N V +  M++ +G+      +  +FR M+  G+ 
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI 412

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEA 669
           P+  T+ ++L  C+  G +D G QI     Q  K       Y C  + DM  + GK+  A
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIH---TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA 469

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           +  ++ L E+  V   W +L+       H+  AE + K   EM  R
Sbjct: 470 HVILRTLTEDDVV--SWTALISG--YAQHNLFAEAL-KHFKEMLNR 510


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/649 (33%), Positives = 356/649 (54%), Gaps = 34/649 (5%)

Query: 173 YSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +SKY  +    +VF+ +  +    ++T++  Y K      A+     M    ++P   +F
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +        D K    ++G L+   + +  ++F  +  + MYA+    D A K+FD  
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLIT--NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM 208

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WNT+I G+ QN    +A+EL +++ +  +   D +T ++ L A + +  L +G
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP-DSITLVTVLPAAADVGLLMVG 267

Query: 350 QQLHAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQN 389
           + +H Y I+   A  V                    ++ + + ++ VVSWN+M+  +VQN
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL--LRHGIHFEGM 447
           G  ++ + +  +M ++G     VT+   L A ++L + + GK  H ++  L  G     M
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVM 387

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            S LI MY+K   +  A  IF  N+   R   +WNAMI GY QNG + EA   F +M   
Sbjct: 388 NS-LISMYSKCKRVDIASDIF--NNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSL 444

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + P+  T+ SV+PA   +      K +HG  IR  LD+N+FV T+L+DMYSK G I+ A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  I +++ +T+  MI GYG HG+   AL LF  MK   +EP+ IT+++V+SACS++
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLVDEGL+ F  M+Q+Y ++PS +HY  + D+LGR G++ EA++F++ +     +  ++G
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGI-TVYG 623

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +  G+C++H + E+ E  AKKL E++      GYHVLL+NIYA    W  V +VRK M +
Sbjct: 624 AXXGACKIHKNIEVGEKAAKKLFELNPDEG--GYHVLLANIYASTSKWSKVAEVRKTMEK 681

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +GL+K  GCS +++   V+ F S    HPQS +IY  LE L  E++ AG
Sbjct: 682 KGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 263/547 (48%), Gaps = 49/547 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ I      +++T++ G+  N+    A+    +M+         N+TY  +LK C
Sbjct: 100 AARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY--LLKVC 157

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +  +L+ GK +H   I      + F    ++NMY+ C    DA                
Sbjct: 158 GDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY--------------- 202

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+FD M  R++V+WNTI++ + +     +A+     M   G RP +I+ V V PA +
Sbjct: 203 ---KMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAA 259

Query: 238 SLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +G       ++G  ++ G ++ VN   ++++   MY++ G  + AR IFD   ++    
Sbjct: 260 DVGLLMVGKSIHGYAIRAGFAKLVN---ISTALADMYSKCGSVETARLIFDGMDQKTVVS 316

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M+ GYVQN  P +AI +F ++LE + I    VT + AL A + L +L+ G+ +H ++
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACADLGDLERGKFVHKFV 375

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
            +  +   + V+N++I                     R  VSWN MI  + QNG   E L
Sbjct: 376 DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
               EM+  G   DS T+ +++ A + L      K  H  ++R  +     + + L+DMY
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMY 495

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K G I  AR++F+     DR   TWNAMI GY  +GL   A   F +M +  V PN +T
Sbjct: 496 SKCGAIHMARKLFDM--ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDIT 553

Query: 516 IASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             SV+ AC+  G ++ G +        Y L+ ++    +++D+  ++G I  A +    +
Sbjct: 554 YLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613

Query: 575 PEKNSVT 581
           P    +T
Sbjct: 614 PISPGIT 620



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 203/384 (52%), Gaps = 24/384 (6%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           N+    +  + ++++ G  + A ++F+   ++   +++TM+ GY +N+  +E    F+  
Sbjct: 79  NEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS-SLETALAFLCR 137

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           +  D++      F   L       +L  G+++H  +I N  A  V  +  V+        
Sbjct: 138 MRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQ 197

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                       ERD+VSWNT+I+ F QNG   + L LV  MQ +G   DS+T+  +L A
Sbjct: 198 IDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPA 257

Query: 421 ASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
           A+++    VGK  H Y +R G      + + L DMY+K G ++TAR IF+  D   +   
Sbjct: 258 AADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQ--KTVV 315

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +WN+M+ GY QNG  E+A   F +MLE  + P  VTI   L AC  +G++E GK +H F 
Sbjct: 316 SWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFV 375

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            +  L  ++ V  SLI MYSK   ++ A+++F  +  +  V++  MILGY Q+G    AL
Sbjct: 376 DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 600 SLFRSMKGCGIEPDAITFVAVLSA 623
           + F  MK  G++PD+ T V+V+ A
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPA 459



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 27/217 (12%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +S   +  R  +A  +F+++   T V WN +I+G+  N    EA+  +S+MK  S 
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMK--SL 444

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D++T  SV+ A AE    R  K +H   IR   + + FV  +L++MYS C      
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC------ 498

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                           +  K+FD +  R+V+ WN ++  Y        A+  F  M +  
Sbjct: 499 ------------GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546

Query: 222 IRPSTISFVNVFPALSSLG-------DYKSADVVYGL 251
           + P+ I++++V  A S  G        +KS    YGL
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGL 583



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 11/173 (6%)

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           L ++++F  T L+ ++SK G IN AA VF  I +K    Y TM+ GY ++   E AL+  
Sbjct: 77  LYNEHLF-QTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFL 135

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M+   ++P    F  +L  C     +  G +I   +        +      V +M  +
Sbjct: 136 CRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN-SFAANVFAMTGVVNMYAK 194

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
             ++ +AY+    + E    L  W +++     +G        AKK LE+  R
Sbjct: 195 CRQIDDAYKMFDRMPERD--LVSWNTIIAGFSQNG-------FAKKALELVLR 238


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/784 (29%), Positives = 408/784 (52%), Gaps = 49/784 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P   T +  + L+     G    A  LF ++  P  V WN ++ G+    +  +++ L 
Sbjct: 65  MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M +     + D  T + +LKAC    +L +G  +H   ++          ++L++MY 
Sbjct: 125 VEMARRG--VAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C S  DA                   + F  M  RN V+W   ++  V+ E+Y   +  
Sbjct: 183 KCRSLEDA------------------LRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLEL 224

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R+G+  S  ++ +VF + +++    +A  ++   +K  +++  D  V ++ + +Y
Sbjct: 225 FVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIK--NKFSADRVVGTAIVDVY 282

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+      AR+ F +      +  N M+ G V+     EA++LF Q +    I FD V+ 
Sbjct: 283 AKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLF-QFMTRSGIGFDVVSL 341

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
               SA ++++    G Q+H   IK+   + V V NA++                    +
Sbjct: 342 SGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 401

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD VSWN +I+A  QN   ++ +  + EM + G   D  T  ++L A + L++ + G   
Sbjct: 402 RDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVV 461

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H   ++ G+  +  + S ++DMY K G+I  A+++ ++   G ++  +WN++I+G++ N 
Sbjct: 462 HGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDR--IGGQELVSWNSIISGFSLNK 519

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEA   F +ML+  V P+  T A+VL  C  +  IELGKQ+HG  I+  +  + ++ +
Sbjct: 520 QSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISS 579

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  +  +F K  + + V++  MI GY  HG    AL +F  M+   + P
Sbjct: 580 TLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVP 639

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           +  TFVAVL ACS+ GL+D+G + F LM   YK++P  EH+ C+ D+LGR     EA +F
Sbjct: 640 NHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKF 699

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           ++ +  E + + IW +LL  C++    E+AE  A  +L +D  +S    ++LLSN+YAE 
Sbjct: 700 IRSMPLEADAV-IWKTLLSICKIRQDVEVAETAASNVLRLDPDDS--SVYILLSNVYAES 756

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W +V + R+ MR+  L+KE GCSWI+V   ++ F + D+ HP+S ++YEML  L +EM
Sbjct: 757 GKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEM 816

Query: 793 RNAG 796
           + +G
Sbjct: 817 KLSG 820



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 259/572 (45%), Gaps = 42/572 (7%)

Query: 109 TYSSVLKACAETRN--LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           T+S + + CA      L  G+A H   +     P+ FV N LL MY+ C  +  A  V  
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 167 KYVEVDYSKYDLV-------------CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                D   ++ +               +F  M   +VV+WN ++S Y +   + ++V  
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
              M R G+ P   +   +  A   L D      ++ + VK G E   D+   S+ + MY
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEM--DVRAGSALVDMY 181

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            +    + A + F    ERN+  W   I G VQN      +ELFVQ+  L  +      +
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLG-LGVSQPAY 240

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
            S   + + +  L   +QLHA+ IKN  +   +V  A+++                    
Sbjct: 241 ASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN 300

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
             V + N M+   V+ GL  E L L   M + G   D V+++ + SA + ++    G Q 
Sbjct: 301 HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQV 360

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H   ++ G   +  + + ++D+Y K   +  A  +F++ +   RD  +WNA+IA   QN 
Sbjct: 361 HCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME--QRDSVSWNAIIAALEQNE 418

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             E+      +ML + + P+  T  SVL AC  + ++E G  +HG +I+  L  + FV +
Sbjct: 419 CYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSS 478

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +++DMY K G+I  A  +  +I  +  V++ ++I G+  +  SE A   F  M   G++P
Sbjct: 479 TVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKP 538

Query: 613 DAITFVAVLSACSYAGLVDEGLQIF-DLMQQE 643
           D  T+  VL  C+    ++ G QI   +++QE
Sbjct: 539 DHFTYATVLDTCANLATIELGKQIHGQIIKQE 570



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 127/527 (24%), Positives = 224/527 (42%), Gaps = 66/527 (12%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L S ++   FV++  + MYA  G    AR +FD    R+T  WNTM+  Y        A 
Sbjct: 31  LVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAA 90

Query: 315 ELFVQVLELDEIVF------------------------------DDVTFLSALSAVSQLQ 344
            LF  + + D + +                              D  T    L A   L+
Sbjct: 91  SLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLE 150

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
           +L LG Q+HA  +K  + + V   +A++                    ER+ VSW   I+
Sbjct: 151 DLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIA 210

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
             VQN     GL L  +MQ+ G  +      ++  + + +      +Q HA+ +++    
Sbjct: 211 GCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSA 270

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + + ++D+YAK+  +  AR+ F      +      NAM+ G  + GL  EA   F+ 
Sbjct: 271 DRVVGTAIVDVYAKADSLVDARRAFFSLP--NHTVQACNAMMVGLVRTGLGAEALQLFQF 328

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M    +  +VV+++ V  AC  +     G Q+H  +I+   D +V V  +++D+Y K   
Sbjct: 329 MTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKA 388

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A  VF ++ +++SV++  +I    Q+   E  ++    M   G+EPD  T+ +VL A
Sbjct: 389 LVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKA 448

Query: 624 CSYA-----GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           C+       G V  G  I   +  +  +  +      V DM  + G + EA +    +G 
Sbjct: 449 CAGLQSLEYGSVVHGKAIKSGLGLDAFVSST------VVDMYCKCGMITEAQKLHDRIG- 501

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
            G  L  W S++    L+  SE A+    ++L++  +     Y  +L
Sbjct: 502 -GQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVL 547


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/718 (34%), Positives = 382/718 (53%), Gaps = 60/718 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  ++KA     ++  GK +H H ++       FV NSLL MY  C +  +A        
Sbjct: 42  FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNA-------- 93

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            VD         +F+ M  R+ V+WNT++S + ++  YV+++  FR M++     S  + 
Sbjct: 94  -VD---------MFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKE-CGGSYHNR 142

Query: 230 VNVFPALSSLGDYKSAD---VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           V    ALSS    K       ++G LVK G +  +D F+ S+ I MY + G    A  +F
Sbjct: 143 VACLAALSSCASIKCLTHGLEIHGFLVKKGVD--SDEFLVSALIEMYMKCGDIKNAENVF 200

Query: 287 ----DNCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
               DN L  RN  VWN MI GYV N     A+ELFV++LEL  I  D  T +  L   S
Sbjct: 201 ERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELG-ISPDSSTVVVVLVLCS 259

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
           QL +L +G+Q+H  I+   +   V V  A++E                     ++V W +
Sbjct: 260 QLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGS 319

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           ++    QNG  +E L    E        D V + A L A S L  +  G   H + ++ G
Sbjct: 320 VMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMG 379

Query: 442 IH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
                F G    L+D Y K G ++ A+Q+F    +  RD  +WNA+I+G+ QN   +EA 
Sbjct: 380 FDSDVFVG--GALVDFYGKCGDMEYAQQVFYGLST--RDLVSWNALISGFAQNKCADEAL 435

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            AFR M    + PN VT+A +L  C  +  + L K++H + +R+  + N  V  SLI  Y
Sbjct: 436 KAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAY 495

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           +K G I+ +  VF K+P +N VT+ +++LG+G HG ++   + F  MK   I+PD  TF 
Sbjct: 496 AKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFT 555

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           ++LS+CS++G VD G + F+ M ++Y ++P  E Y C+ D+LGR G + +AY+ +  +  
Sbjct: 556 SLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPC 615

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
             +   IWGSLL SC+ HG+++LAEVVA  + E+D   S  GY VLL+N+Y + GN   V
Sbjct: 616 SPDD-RIWGSLLASCKNHGNTKLAEVVANHIFELDA--SSVGYRVLLANLYEDSGNLNEV 672

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +VR ++++ GL+K+ GCSWI+V   ++ F + D  H +S  IY  +E L++EM+  G
Sbjct: 673 FRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRVG 730



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 269/569 (47%), Gaps = 51/569 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F+ +    +V WNT+I GF  +    ++++++ +M K    +  +     + L +C
Sbjct: 93  AVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSC 152

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  + L  G  +H   ++   +   F+ ++L+ MY  C    +AE               
Sbjct: 153 ASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAE--------------- 197

Query: 178 LVCKVFDTMRR-----RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               VF+ +R      RN+  WN ++  YV  E    A+  F  ML +GI P + + V V
Sbjct: 198 ---NVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVV 254

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               S L D      ++GL++ LG +  +D+ V ++ + MY + G  + + +IF      
Sbjct: 255 LVLCSQLLDLAVGKQIHGLILGLGLD--DDVRVGTALMEMYFKCGDPETSLQIFKRSQNH 312

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +W +++    QN +P EA+E F + + LD    D V  L+AL A S L     G  +
Sbjct: 313 NLVMWGSVMLNCAQNGYPNEALEFFSEFM-LDCGFPDPVILLAALRACSFLSLKPRGMAI 371

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H + IK      V V  A+++                    RD+VSWN +IS F QN   
Sbjct: 372 HGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCA 431

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
           DE L    +MQ +    ++VT+  +LS  ++L    + K+ H YLLRH      +  + L
Sbjct: 432 DEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSL 491

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I  YAK G I ++R +FEK     R++ TWN+++ G+  +G  +E F  F +M E N+ P
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPV--RNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKP 549

Query: 512 NVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           +  T  S+L +C+  G ++ G K  +     Y L+  V   T ++D+  ++G +N A ++
Sbjct: 550 DHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDL 609

Query: 571 FAKIP-EKNSVTYTTMILGYGQHGMSERA 598
              +P   +   + +++     HG ++ A
Sbjct: 610 IMSMPCSPDDRIWGSLLASCKNHGNTKLA 638



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 141/314 (44%), Gaps = 23/314 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  + Q+F        V+W ++++    N  P EA+  +S+      +   D     +
Sbjct: 297 GDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFP--DPVILLA 354

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L+AC+       G A+H   I+   +   FV  +L++ Y  C              +++
Sbjct: 355 ALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKC-------------GDME 401

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y++     +VF  +  R++V+WN ++S + + +   EA++ FR M    I+P+T++   +
Sbjct: 402 YAQ-----QVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACI 456

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               + L        V+  L++   E   +  V +S I  YA+ G    +R +F+    R
Sbjct: 457 LSVCTHLSVMILCKEVHCYLLRHWFE--TNALVNNSLISAYAKCGDIHSSRTVFEKLPVR 514

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN+++ G+  +    E    F ++ E + I  D  TF S LS+ S   ++D G + 
Sbjct: 515 NEVTWNSILLGFGMHGRTDEMFATFEKMKEAN-IKPDHGTFTSLLSSCSHSGKVDAGWKY 573

Query: 353 HAYIIKNFVALPVI 366
              +++++   P +
Sbjct: 574 FNSMMEDYNLEPRV 587


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 236/771 (30%), Positives = 393/771 (50%), Gaps = 52/771 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +FD++ +     WN +I  +  N L +  + ++ +M   S     DN+T+  
Sbjct: 131 GSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLP-DNFTFPC 189

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KACA    +++G AVH   ++       FV N+L++ Y T  S  DA           
Sbjct: 190 VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDA----------- 238

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR----MGIRPSTIS 228
                   +VF  M  RN+V+WN+++  +       E       M+     +   P   +
Sbjct: 239 -------LRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVAT 291

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
              V P  +   +      V+GL +KL  +   ++ V ++ + MY++ GC + A+ IF  
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLD--KEVVVNNALMDMYSKCGCINDAQVIFKL 349

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDDVTFLSALSAVSQLQELD 347
              +N   WNTM+GG+       +  +L  Q+L    ++  D+VT L+A+    +   L 
Sbjct: 350 NNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLP 409

Query: 348 LGQQLHAYIIKN-FVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             ++LH Y +K  FV    +V NA +                     + V SWN +I  +
Sbjct: 410 NLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGY 469

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q+      L   ++M+  G + D  TV +LLSA S +++  +GK+ H  ++R+ +  + 
Sbjct: 470 SQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDS 529

Query: 447 MESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                L+ +Y   G + TA  +F+  +  D+   +WN M+ GY QNG  E A   FRQM+
Sbjct: 530 FVYISLLSLYIHCGELSTAHVLFDAME--DKTLVSWNTMVNGYLQNGFPERALSLFRQMV 587

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
            + V P  +++ SV  AC+ + ++ LG++ HG++++ LL+ N F+  S+IDMY+K+G + 
Sbjct: 588 LYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVM 647

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF  + E++  ++  M++GYG HG ++ A+ LF  M+  G  PD +TF+ VL+AC+
Sbjct: 648 ESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACN 707

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++GLV EGL   D M+  + + P+ +HY CV DML R GK+ EA +   E   E   + I
Sbjct: 708 HSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGI 767

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W  LL SCR+H + E+ E +A KL   +     P  +VLLSN+YA  G W+ V KVR+ M
Sbjct: 768 WNFLLSSCRIHKNLEMGEKIAAKLFVSEPEK--PENYVLLSNLYAGSGKWDEVRKVRQRM 825

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +E  LRK+ GCSWI++ G V  F + +       +I  +   L  E+   G
Sbjct: 826 KEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMG 876



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 205/417 (49%), Gaps = 30/417 (7%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           LV   +   ND  + +  I MY+  G  D +R +FD   ++N   WN +I  Y +N    
Sbjct: 106 LVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYH 165

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
             +E+FV+++    ++ D+ TF   + A + + E+ +G  +H  ++K  +   V V NA+
Sbjct: 166 NVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNAL 225

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ----GF 407
           +                    ER++VSWN+MI  F  NGL +E  +L+ +M ++     F
Sbjct: 226 VSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAF 285

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             D  T+  +L   +  R   VGK  H   ++  +  E  + + L+DMY+K G I  A+ 
Sbjct: 286 TPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQV 345

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACN 524
           IF+ N+  +++  +WN M+ G++  G + + F   RQML    ++  + VTI + +P C 
Sbjct: 346 IFKLNN--NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCF 403

Query: 525 PMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
               +   K+LH +S++   +  N  V  + +  Y+K G ++YA  VF  I  K   ++ 
Sbjct: 404 EESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWN 463

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            +I GY Q      +L  +  MK  G+ PD  T  ++LSACS    +  G ++  L+
Sbjct: 464 ALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLI 520



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS     G    A  LFD++   T V WNT++ G++ N  P  A+ L+ QM       
Sbjct: 534 SLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG-VQ 592

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C+  +  SV  AC+   +LR+G+  H + ++C    + F+  S+++MY+   S +++  
Sbjct: 593 PCE-ISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMES-- 649

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVF+ ++ R+V +WN +V  Y    R  EA++ F  M R G  
Sbjct: 650 ----------------FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHC 693

Query: 224 PSTISFVNVFPALSSLG 240
           P  ++F+ V  A +  G
Sbjct: 694 PDELTFLGVLTACNHSG 710


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/778 (31%), Positives = 402/778 (51%), Gaps = 58/778 (7%)

Query: 46   LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYT 103
            +S +   GR   AR L   I   +TV WN +I  +  + L  E   LY  MKK    P  
Sbjct: 265  ISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTR 324

Query: 104  SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY--STCLSSLDA 161
            S    T++S+L A A       G+ +H   ++   + + FV +SL+N+Y    C+S  DA
Sbjct: 325  S----TFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCIS--DA 378

Query: 162  EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            +                  KVFD    +N+V WN I+  +V+ E   E ++ F+ M R  
Sbjct: 379  K------------------KVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRAD 420

Query: 222  IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
            +     +FV+V  A  +L        V+ + +K G +   DLFVA++ + MY++LG  D 
Sbjct: 421  LEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMD--ADLFVANAMLDMYSKLGAIDV 478

Query: 282  ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
            A+ +F     +++  WN +I G   N    EAI + ++ ++   I  D+V+F +A++A S
Sbjct: 479  AKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINM-LKRMKFYGIALDEVSFATAINACS 537

Query: 342  QLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNT 381
             +  ++ G+Q+H+  IK      + V   +I              VL  V    +V  N 
Sbjct: 538  NIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINA 597

Query: 382  MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            +I+  VQN  +DE + L  ++ K GF   + T T++LS  +   +  +GKQ H Y L+  
Sbjct: 598  LITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSA 657

Query: 442  I--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            I      +   L+ +Y K  L++ A ++ E+     ++   W A I+GY QNG   ++ V
Sbjct: 658  ILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPD-HKNLVEWTATISGYAQNGYSVQSLV 716

Query: 500  AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
             F +M  ++V  +  T  SVL AC+ M  +  GK++HG  ++          ++L+DMYS
Sbjct: 717  MFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYS 776

Query: 560  KSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            K G +  +  +F ++  + N + + +MI+G+ ++G +  AL LF+ M+   I+PD +T +
Sbjct: 777  KCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLL 836

Query: 619  AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
             VL ACS+AGL+ EGL  FD M Q Y I P  +HY C+ D+LGR G + +A E + +L  
Sbjct: 837  GVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPF 896

Query: 679  EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
              + + IW + L +C++H   E  +V AKKL+EM+ ++S    +V LS+++A  GNW   
Sbjct: 897  RADGV-IWATYLAACQMHKDEERGKVAAKKLVEMEPQSS--STYVFLSSLHAAAGNWVEA 953

Query: 739  DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
               R+ MRE+G+ K  GCSWI VG   + F  +D  HP +  IY+ML+ L   M   G
Sbjct: 954  KVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDG 1011



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 228/425 (53%), Gaps = 25/425 (5%)

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R+   +G  P       V  A S LG  +    V+  ++K G  + + +F  +  + MYA
Sbjct: 146 RIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSG--FCSSVFCQAGLVDMYA 203

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G  D AR++FD     +T  W +MI GY +     +A+ LF ++ ++   V D VT +
Sbjct: 204 KCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS-VPDQVTCV 262

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           + +S ++ +  L   + L               L  +     V+WN +I+++ Q+GLD E
Sbjct: 263 TIISTLASMGRLGDARTL---------------LKRIRMTSTVAWNAVIASYSQSGLDSE 307

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYL 451
              L  +M+KQG M    T  ++LSAA+N+   D G+Q HA  ++HG+    F G  S L
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVG--SSL 365

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I++Y K G I  A+++F+   S +++   WNA++ G+ QN L EE    F+ M   ++  
Sbjct: 366 INLYVKHGCISDAKKVFDF--STEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEA 423

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T  SVL AC  + +++LG+Q+H  +I+  +D ++FV  +++DMYSK G I+ A  +F
Sbjct: 424 DDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALF 483

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           + IP K+SV++  +I+G   +     A+++ + MK  GI  D ++F   ++ACS    ++
Sbjct: 484 SLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIE 543

Query: 632 EGLQI 636
            G QI
Sbjct: 544 TGKQI 548



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 154/643 (23%), Positives = 289/643 (44%), Gaps = 80/643 (12%)

Query: 95  QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
           Q  + S  ++ D +  + VL AC+    L  G+ VHC  ++     S F    L++MY+ 
Sbjct: 145 QRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAK 204

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
           C              EVD ++     ++FD +   + + W ++++ Y +           
Sbjct: 205 C-------------GEVDDAR-----RMFDGIACPDTICWTSMIAGYHR----------- 235

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
                                   +G Y+ A  ++  + K+GS  V D     + I   A
Sbjct: 236 ------------------------VGRYQQALALFSRMEKMGS--VPDQVTCVTIISTLA 269

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
            +G    AR +       +T  WN +I  Y Q+    E   L+ + ++   ++    TF 
Sbjct: 270 SMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLY-KDMKKQGLMPTRSTFA 328

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
           S LSA + +   D G+Q+HA  +K+ +   V V +++I                    E+
Sbjct: 329 SILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEK 388

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           ++V WN ++  FVQN L +E + +   M++     D  T  ++L A  NL + D+G+Q H
Sbjct: 389 NIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVH 448

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
              +++G+  +  + + ++DMY+K G I  A+ +F       +D  +WNA+I G   N  
Sbjct: 449 CITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPV--KDSVSWNALIVGLAHNEE 506

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             EA    ++M  + +  + V+ A+ + AC+ +  IE GKQ+H  SI+Y +  N  VG+S
Sbjct: 507 EGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSS 566

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LID+YSK G +  +  V A +   + V    +I G  Q+   + A+ LF+ +   G +P 
Sbjct: 567 LIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPS 626

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
             TF ++LS C+       G Q+     +   +   T     +  +  +   + +A + +
Sbjct: 627 NFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLL 686

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
           +E+ +  N++E W + +     +G+S  + V+  ++   D R+
Sbjct: 687 EEVPDHKNLVE-WTATISGYAQNGYSVQSLVMFWRMRSYDVRS 728



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 125/249 (50%), Gaps = 7/249 (2%)

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           HA +LR G+   G +   L+D+Y +SG +  A +            A  +++++ + ++G
Sbjct: 76  HARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARSG 135

Query: 493 LLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
              +   AF+++      TP+   IA VL AC+ +G +E G+Q+H   ++     +VF  
Sbjct: 136 SPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQ 195

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             L+DMY+K G ++ A  +F  I   +++ +T+MI GY + G  ++AL+LF  M+  G  
Sbjct: 196 AGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSV 255

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +T V ++S  +  G + +   +   ++       ST  +  V     + G   E + 
Sbjct: 256 PDQVTCVTIISTLASMGRLGDARTLLKRIR-----MTSTVAWNAVIASYSQSGLDSEVFG 310

Query: 672 FVKELGEEG 680
             K++ ++G
Sbjct: 311 LYKDMKKQG 319



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI--PEKNSVTYTTMILGYGQH 592
           LH   +R  L     +G +L+D+Y +SG + YA    A       +S   ++++  + + 
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 593 GMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPST 650
           G     L  F+ ++   G  PD      VLSACS  G ++ G Q+  D+++  +     +
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGF----CS 190

Query: 651 EHYC--CVADMLGRVGKVVEA 669
             +C   + DM  + G+V +A
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDA 211


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 241/746 (32%), Positives = 391/746 (52%), Gaps = 50/746 (6%)

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
           +WN+II  F  N L  EA+  Y ++++S    S D YT+ SV+KACA   +  +G  V+ 
Sbjct: 73  LWNSIIRAFSKNGLFPEALEFYGKLRESK--VSPDKYTFPSVIKACAGLFDAEMGDLVYE 130

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             +        FV N+L++MYS          +GL              +VFD M  R++
Sbjct: 131 QILDMGFESDLFVGNALVDMYSR---------MGL---------LTRARQVFDEMPVRDL 172

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+WN+++S Y     Y EA+  +  +    I P + +  +V PA  +L   K    ++G 
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +K  S   + + V +  + MY +      AR++FD    R++  +NTMI GY++     
Sbjct: 233 ALK--SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           E++ +F++   LD+   D +T  S L A   L++L L + ++ Y++K    L   V N +
Sbjct: 291 ESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           I+                    +D VSWN++IS ++Q+G   E + L   M       D 
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK 470
           +T   L+S ++ L +   GK  H+  ++ GI  +  + + LIDMYAK G +  + +IF  
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             +GD    TWN +I+   + G          QM +  V P++ T    LP C  +    
Sbjct: 469 MGTGD--TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 526

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           LGK++H   +R+  +  + +G +LI+MYSK G +  ++ VF ++  ++ VT+T MI  YG
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 586

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            +G  E+AL  F  M+  GI PD++ F+A++ ACS++GLVDEGL  F+ M+  YKI P  
Sbjct: 587 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 646

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           EHY CV D+L R  K+ +A EF++ +  + +   IW S+L +CR  G  E AE V+++++
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDA-SIWASVLRACRTSGDMETAERVSRRII 705

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  +  PGY +L SN YA    W+ V  +RK ++++ + K  G SWI+VG  V+ F+S
Sbjct: 706 ELNPDD--PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D   PQS  IY+ LE L   M   G
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEG 789



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 164/595 (27%), Positives = 289/595 (48%), Gaps = 52/595 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+FD +     V WN++I G+  +    EA+ +Y ++K S  +   D++T SSVL A 
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS--WIVPDSFTVSSVLPAF 217

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                ++ G+ +H   ++   N    V N L+ MY       DA                
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR--------------- 262

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  R+ V++NT++  Y+K E   E+VR F   L    +P  ++  +V  A  
Sbjct: 263 ---RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACG 318

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L D   A  +Y  ++K G  +V +  V +  I +YA+ G    AR +F++   ++T  W
Sbjct: 319 HLRDLSLAKYIYNYMLKAG--FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N++I GY+Q+   +EA++LF  ++ ++E   D +T+L  +S  ++L +L  G+ LH+  I
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISVSTRLADLKFGKGLHSNGI 435

Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
           K+ + + + V NA+I+                     D V+WNT+ISA V+ G    GL 
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           +  +M+K   + D  T    L   ++L  + +GK+ H  LLR G   E  + + LI+MY+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G ++ + ++FE+     RD  TW  MI  Y   G  E+A   F  M +  + P+ V  
Sbjct: 556 KCGCLENSSRVFERMSR--RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613

Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            +++ AC+  G ++ G          Y +D  +     ++D+ S+S  I+ A      +P
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673

Query: 576 EK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            K ++  + +++      G  E A  + R +    + PD   + ++L++ +YA L
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRI--IELNPDDPGY-SILASNAYAAL 725



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 235/458 (51%), Gaps = 27/458 (5%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           +NV  WN+I+  + K   + EA+  +  +    + P   +F +V  A + L D +  D+V
Sbjct: 69  KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           Y  ++ +G E  +DLFV ++ + MY+ +G    AR++FD    R+   WN++I GY  + 
Sbjct: 129 YEQILDMGFE--SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---------- 358
           +  EA+E++ + L+   IV D  T  S L A   L  +  GQ LH + +K          
Sbjct: 187 YYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245

Query: 359 -NFVALPVI---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
              VA+ +          V + +  RD VS+NTMI  +++  + +E + +  E   Q F 
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
            D +TV+++L A  +LR+  + K  + Y+L+ G   E  + + LID+YAK G + TAR +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F  N    +D  +WN++I+GY Q+G L EA   F+ M+      + +T   ++     + 
Sbjct: 365 F--NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +++ GK LH   I+  +  ++ V  +LIDMY+K G +  +  +F+ +   ++VT+ T+I 
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
              + G     L +   M+   + PD  TF+  L  C+
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 227/478 (47%), Gaps = 49/478 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY-SQMKKSSPYTSCDNYTYSS 112
           RP  AR++FD +    +V +NT+I G++   +  E++ ++   + +  P    D  T SS
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP----DLLTVSS 312

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL+AC   R+L + K ++ + ++        V N L+++Y+ C      +M+  +     
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC-----GDMITAR----- 362

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VF++M  ++ V+WN+I+S Y+++   +EA++ F+MM+ M  +   I+++ +
Sbjct: 363 --------DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               + L D K    ++   +K G     DL V+++ I MYA+ G    + KIF +    
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSG--ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  WNT+I   V+       +++  Q +   E+V D  TFL  L   + L    LG+++
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  +++      + + NA+IE                    RDVV+W  MI A+   G  
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
           ++ L    +M+K G + DSV   A++ A S+    D G      +  H      +E Y  
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           ++D+ ++S  I  A + F +      D + W +++     +G +E A    R+++E N
Sbjct: 652 VVDLLSRSQKISKAEE-FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 10/185 (5%)

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI-PEKNSV 580
           A +   N+   +++H   I   LD + F    LID YS       + +VF ++ P KN  
Sbjct: 13  ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            + ++I  + ++G+   AL  +  ++   + PD  TF +V+ AC  AGL D   ++ DL+
Sbjct: 73  LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA--EMGDLV 128

Query: 641 -QQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
            +Q   +   ++ +    + DM  R+G +  A +   E+      L  W SL+     HG
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD--LVSWNSLISGYSSHG 186

Query: 698 HSELA 702
           + E A
Sbjct: 187 YYEEA 191


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 233/777 (29%), Positives = 407/777 (52%), Gaps = 50/777 (6%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
            T+ + +S +   GR   A  L   +  P+TV WN +I G   + L +  + LY  M+   
Sbjct: 271  TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 330

Query: 101  PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
             + +    T++S+L A A  +    G+ +H   +    + + FV +SL+N+Y+ C    D
Sbjct: 331  LWPT--RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSD 388

Query: 161  AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            A+ V           +DL C+       +N+V WN +++ +V+ E   EA+R F+ M+R 
Sbjct: 389  AKNV-----------FDLSCE-------KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 430

Query: 221  GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
             ++    +FV++  A + L  +     V+ + +K   +    LFVA++ + MY++ G   
Sbjct: 431  TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI--SLFVANATLDMYSKYGAIG 488

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             A+ +F     +++  WN +  G  QN    EA+   ++ + L  I  DDV+F +A++A 
Sbjct: 489  DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAV-CMLKRMRLHGITPDDVSFSTAINAC 547

Query: 341  SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
            S ++  + G+Q+H   IK  +     V +++I+                      +V  N
Sbjct: 548  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 607

Query: 381  TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
             +I+ FVQN  +DE + L  ++ K G    SVT +++LS  S   N  +GKQ H Y L+ 
Sbjct: 608  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 667

Query: 441  GIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+ ++   +   L  +Y KS +++ A ++  +     ++   W A+I+GY QNG  + + 
Sbjct: 668  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIISGYAQNGYGDHSL 726

Query: 499  VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            V+F +M   NV  +  T ASVL AC+ +     GK++HG   +          ++LIDMY
Sbjct: 727  VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMY 786

Query: 559  SKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
            SK G +  +   F ++  K  +  + +MI+G+ ++G ++ AL LF+ M+   I+PD +TF
Sbjct: 787  SKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTF 846

Query: 618  VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            + VL AC+++GL+ EG   F  M++ Y + P  +HY C  D+LGR G + EA E + +L 
Sbjct: 847  LGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLP 906

Query: 678  EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
               + + +W + L +CR+H   E  ++ A+KL+E++ + S    +VLLS+++A  GNW  
Sbjct: 907  FRPDGV-VWATYLAACRMHKDEERGKIAARKLVELEPQYS--STYVLLSSLHAATGNWAE 963

Query: 738  VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
                R+ MRE+G+ K  GCSWI VG   + F  +D+ HP + +IYEML  L   M+ 
Sbjct: 964  AKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1020



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 282/638 (44%), Gaps = 106/638 (16%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-- 88
           SPP  +  + T R+   +I + G P L R L DS+     +   +  +G+  + L Y   
Sbjct: 75  SPPRAR-HSQTCRALHGRILRGGSPLLGR-LGDSLVE---LYCKSGRVGYAWSALGYAGE 129

Query: 89  ------AILLYSQMKKSSP--------YTSC------DNYTYSSVLKACAETRNLRIGKA 128
                 + LL    +  SP        Y  C      D +  + VL AC+    L  G+ 
Sbjct: 130 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 189

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VHC  ++   + S F   +L++MY+ C    +A                   +VFD +  
Sbjct: 190 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR------------------RVFDGIAC 231

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
            + + W+++++ Y +   Y EA+  F  M +MG  P  ++ V +   L+S G        
Sbjct: 232 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR------- 284

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
                                          D A  +       +T  WN +I G+ Q+ 
Sbjct: 285 ------------------------------LDHATALLKKMPTPSTVAWNAVISGHAQSG 314

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
                + L+  +     +     TF S LSA + ++    GQQ+HA  + + +   V V 
Sbjct: 315 LEFNVLGLYKDMRSWG-LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 373

Query: 369 NAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +++I                    E+++V WN M++ FVQN L +E + +   M +    
Sbjct: 374 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 433

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D  T  ++L A + L +  +GKQ H   +++ +     + +  +DMY+K G I  A+ +
Sbjct: 434 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 493

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F       +D  +WNA+  G  QN   EEA    ++M  H +TP+ V+ ++ + AC+ + 
Sbjct: 494 FSLIPY--KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 551

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             E GKQ+H  +I+Y +  N  VG+SLID+YSK G +  +  +FA++   + V    +I 
Sbjct: 552 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 611

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           G+ Q+   + A+ LF+ +   G++P ++TF ++LS CS
Sbjct: 612 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 232/455 (50%), Gaps = 26/455 (5%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMM-LRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           R   A ++++S + ++    + +  FR +    G RP       V  A S +G       
Sbjct: 130 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 189

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  +VK G  + + +F  ++ + MYA+ G    AR++FD     +T  W++MI  Y + 
Sbjct: 190 VHCDVVKSG--FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 247

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               EA+ LF ++ ++     D VT ++ +S ++    LD     HA  +   +  P   
Sbjct: 248 GCYQEALALFSRMDKMGSAP-DQVTLVTIISTLASSGRLD-----HATALLKKMPTP--- 298

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                    V+WN +IS   Q+GL+   L L  +M+  G      T  ++LSAA+N++  
Sbjct: 299 -------STVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 351

Query: 428 DVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
             G+Q HA  + HG+    F G  S LI++YAK G    A+ +F+   S +++   WNAM
Sbjct: 352 VEGQQMHAAAVMHGLDANVFVG--SSLINLYAKCGCPSDAKNVFDL--SCEKNIVMWNAM 407

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           + G+ QN L EEA   F+ M+ + +  +  T  S+L AC  + +  LGKQ+H  +I+  +
Sbjct: 408 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 467

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D ++FV  + +DMYSK G I  A  +F+ IP K+S+++  + +G  Q+   E A+ + + 
Sbjct: 468 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 527

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           M+  GI PD ++F   ++ACS     + G QI  L
Sbjct: 528 MRLHGITPDDVSFSTAINACSNIRATETGKQIHCL 562



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 4/218 (1%)

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           R+    +  H  +LR G    G +   L+++Y KSG +  A        +G+R     ++
Sbjct: 80  RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSAL--GYAGERASGAASS 137

Query: 484 MIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++ + ++G   +   AFR +       P+   +A VL AC+ +G +  G+Q+H   ++ 
Sbjct: 138 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 197

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
               +VF   +L+DMY+K G +  A  VF  I   +++ +++MI  Y + G  + AL+LF
Sbjct: 198 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 257

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             M   G  PD +T V ++S  + +G +D    +   M
Sbjct: 258 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 295


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/790 (29%), Positives = 405/790 (51%), Gaps = 49/790 (6%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY 87
           H +   +P   T +  + L+     G    A  LF ++  P  V WNT+I G+  + +  
Sbjct: 74  HGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFR 133

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            ++ L  +M +     + D  T + +LK+C    +L +G  +H   ++          ++
Sbjct: 134 NSVGLSMEMSRRG--VALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSA 191

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L++MY  C S  DA                   + F  M  RN V+W   ++  V+ E+Y
Sbjct: 192 LVDMYGKCRSLDDA------------------LRFFHGMGERNSVSWGAAIAGCVQNEQY 233

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
              +  F  M R+G+  S  ++ + F + +++    +A  ++   +K  + + +D  V +
Sbjct: 234 TRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIK--NVFSSDRVVGT 291

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + + +YA+ G    AR+ F      N E  N M+ G V+     EA++LF Q +    + 
Sbjct: 292 AIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLF-QFMTRSGVG 350

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------- 372
           FD ++     SA ++++    G Q+H   +K+   + V V NA++               
Sbjct: 351 FDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLV 410

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                +RD VSWN +I+A  QN   ++ +  + EM + G   D  T  ++L A + L++ 
Sbjct: 411 FQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSL 470

Query: 428 DVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           + G   H   ++ G+  +  + S ++DMY K G I  A+++ ++   G ++  +WN++I+
Sbjct: 471 EYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDR--IGGQELVSWNSIIS 528

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           G++     EEA   F +ML+  V P+  T A+VL  C  +  IELGKQ+HG  I+  +  
Sbjct: 529 GFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLG 588

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           + ++ ++L+DMY+K G +  +  +F K  + + V++  MI GY  HG    AL +F  M+
Sbjct: 589 DEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQ 648

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
              + P+  TFVAVL ACS+ GL+D+G Q F LM   YK+ P  EH+ C+ D+LGR    
Sbjct: 649 RANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGP 708

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            EA EF++ +  E + + +W +LL  C++    E+AE  A  +L +D  ++    ++LLS
Sbjct: 709 QEALEFIRSMPIEADAV-VWKTLLSICKIRQDVEVAETAASNVLRLDPDDA--SVYILLS 765

Query: 727 NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           N+YA  G W +V + R+ MR+  LRKE GCSWI+V   ++ F   D+ HP+S ++YEML 
Sbjct: 766 NVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLN 825

Query: 787 RLAMEMRNAG 796
            L  EM+ +G
Sbjct: 826 SLIGEMKLSG 835



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 257/572 (44%), Gaps = 42/572 (7%)

Query: 109 TYSSVLKACAETRN--LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV-- 164
           T+S + + CA      L  G+A H   +     P+ FV N LL MY+ C  +  A  V  
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 165 -----------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                       +    V     D    +F TM   +VV+WNT++S Y +   +  +V  
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
              M R G+     +   +  +   L D      ++ L VK G E   D+   S+ + MY
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLE--TDVRAGSALVDMY 196

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            +    D A + F    ERN+  W   I G VQN      +ELFVQ+  L  +      +
Sbjct: 197 GKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLG-LGVSQPAY 255

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
            SA  + + +  L   +QLHA+ IKN  +   +V  A+++                    
Sbjct: 256 ASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPH 315

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
            +V + N M+   V+ GL  E + L   M + G   D ++++ + SA + ++    G Q 
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H   ++ G   +  + + ++D+Y K   +  A  +F++ +   RD  +WNA+IA   QN 
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEME--QRDSVSWNAIIAALEQNE 433

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             E+      +ML   + P+  T  SVL AC  + ++E G  +HG +I+  L  + FV +
Sbjct: 434 CYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +++DMY K G I  A  +  +I  +  V++ ++I G+     SE A   F  M   G++P
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553

Query: 613 DAITFVAVLSACSYAGLVDEGLQIF-DLMQQE 643
           D  T+  VL  C+    ++ G QI   +++QE
Sbjct: 554 DHFTYATVLDTCANLATIELGKQIHGQIIKQE 585


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 236/743 (31%), Positives = 378/743 (50%), Gaps = 87/743 (11%)

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
           T   WN +I   V      + + LY +M++       D+YT+  VLKAC E  + R G +
Sbjct: 109 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRP--DHYTFPFVLKACGEIPSFRCGAS 166

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VH          + FV N L++MY  C +  +A                   +VFD MR 
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR------------------QVFDEMRE 208

Query: 189 RNV---VAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
           R V   V+WN+IV+ Y++    + A++ F RM   +GIRP  +S VNV PA +S+G +  
Sbjct: 209 RGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSR 268

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              V+G  ++  S    D+FV ++ + MYA+ G  + A K+F+    ++   WN M+ GY
Sbjct: 269 GKQVHGYALR--SGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGY 326

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            Q     +A+ LF ++ E                                          
Sbjct: 327 SQIGRFDDALGLFEKIRE------------------------------------------ 344

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                  IE +VV+W+ +I+ + Q GL  E L +  +M   G   + VT+ +LLS  ++ 
Sbjct: 345 -----EKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASA 399

Query: 425 RNQDVGKQTHAYLLRHGIHFEGME--------SYLIDMYAKSGLIKTARQIFEKNDSGDR 476
                GK+TH + ++  ++ +  +        + LIDMY+K    K AR +F+     DR
Sbjct: 400 GTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDR 459

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN--VTPNVVTIASVLPACNPMGNIELGKQ 534
              TW  +I G  Q+G   EA   F QML+ +  V PN  TI+  L AC  +G +  G+Q
Sbjct: 460 SVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQ 519

Query: 535 LHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           +H + +R   +   +FV   LIDMYSKSG ++ A  VF  + ++N V++T+++ GYG HG
Sbjct: 520 IHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHG 579

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
             E AL +F  M+   + PD +TFV VL ACS++G+VD+G+  F+ M +++ + P  EHY
Sbjct: 580 RGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHY 639

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ D+L R G++ EA E ++ +  +     +W +LL +CR++ + EL E  A +LLE++
Sbjct: 640 ACMVDLLSRAGRLDEAMELIRGMPMKPTP-AVWVALLSACRVYANVELGEYAANQLLELE 698

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
           + N   G + LLSNIYA    W++V ++R  M+  G++K  GCSW+        F + D 
Sbjct: 699 SGND--GSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDW 756

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP S +IY++L  L   ++  G
Sbjct: 757 SHPMSQQIYDLLRDLMQRIKALG 779



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 135/544 (24%), Positives = 228/544 (41%), Gaps = 122/544 (22%)

Query: 58  ARQLFDSITRPTT---VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           ARQ+FD +        V WN+I+  ++       A+ ++ +M +       D  +  +VL
Sbjct: 199 ARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRP-DAVSLVNVL 257

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            ACA       GK VH + +R       FV N++++MY+ C    +A             
Sbjct: 258 PACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN------------ 305

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY--------------------------- 207
                 KVF+ M+ ++VV+WN +V+ Y +  R+                           
Sbjct: 306 ------KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIA 359

Query: 208 --------VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL---- 255
                    EA+  FR ML  G  P+ ++ V++    +S G        +   +K     
Sbjct: 360 GYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNL 419

Query: 256 -GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVE 312
             ++  +DL V ++ I MY++      AR +FD     +R+   W  +IGG  Q+    E
Sbjct: 420 DENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANE 479

Query: 313 AIELFVQVLELDEIVFDDV-TFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALP 364
           A+ELF Q+L+ D  V  +  T   AL A ++L  L  G+Q+HAY+++N       FVA  
Sbjct: 480 ALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANC 539

Query: 365 VI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I              V + + +R+ VSW ++++ +  +G  +E L + YEMQK   + D
Sbjct: 540 LIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPD 599

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFE 469
            VT   +L A S           H+ ++  GI +F GM           G++  A     
Sbjct: 600 GVTFVVVLYACS-----------HSGMVDQGINYFNGMNKDF-------GVVPGAEH--- 638

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                      +  M+   ++ G L+EA    R M    + P      ++L AC    N+
Sbjct: 639 -----------YACMVDLLSRAGRLDEAMELIRGM---PMKPTPAVWVALLSACRVYANV 684

Query: 530 ELGK 533
           ELG+
Sbjct: 685 ELGE 688



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 183/432 (42%), Gaps = 50/432 (11%)

Query: 51  QEGRPHLARQLFDSITRP----TTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTS 104
           Q GR   A  LF+ I         V W+ +I G+    L +EA+ ++ QM    S P   
Sbjct: 328 QIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEP--- 384

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-------FVYNSLLNMYSTCLS 157
            +  T  S+L  CA    L  GK  HCH I+   N           V N+L++MYS C S
Sbjct: 385 -NVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 443

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
              A            + +DL+       + R+VV W  ++    +     EA+  F  M
Sbjct: 444 PKAAR-----------AMFDLI-----PPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487

Query: 218 LRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           L+    + P+  +      A + LG  +    ++  +++   E    LFVA+  I MY++
Sbjct: 488 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM-LFVANCLIDMYSK 546

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  D AR +FDN  +RN   W +++ GY  +    EA+++F ++ ++  +V D VTF+ 
Sbjct: 547 SGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKV-XLVPDGVTFVV 605

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G      + K+F  +P              +  M+    + G  DE 
Sbjct: 606 VLYACSHSGMVDQGINYFNGMNKDFGVVP----------GAEHYACMVDLLSRAGRLDEA 655

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           + L+  M  +          ALLSA     N ++G+     LL      +G  + L ++Y
Sbjct: 656 MELIRGMPMKP---TPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIY 712

Query: 456 AKSGLIKTARQI 467
           A +   K   +I
Sbjct: 713 ANARCWKDVARI 724



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           TH  LL  G+  +   +++I MY        A  +  +          WN +I      G
Sbjct: 67  THQQLLVQGLPHD--PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 124

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
            LE+    +R+M      P+  T   VL AC  + +   G  +H        + NVFVG 
Sbjct: 125 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 184

Query: 553 SLIDMYSKSGVINYAANVFAKIPEK---NSVTYTTMILGYGQHGMSERALSLFRSM-KGC 608
            L+ MY + G    A  VF ++ E+   + V++ +++  Y Q G S RA+ +F  M +  
Sbjct: 185 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 244

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQI 636
           GI PDA++ V VL AC+  G    G Q+
Sbjct: 245 GIRPDAVSLVNVLPACASVGAWSRGKQV 272


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/766 (31%), Positives = 403/766 (52%), Gaps = 54/766 (7%)

Query: 53  GRPHLARQLFDSITRPT-TVIWNTIIIGFVC-NNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           GR   AR L   +  P+ TV WN +I G+   + + +E   LY  M+    + +    T+
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPT--RSTF 203

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +S+L A A       G+ VH   +R   + + FV +SL+N+Y+ C    DA +V      
Sbjct: 204 ASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILV------ 257

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                       FD    +NVV WN +++  V+ E  VEA++ F  M R+G+     ++V
Sbjct: 258 ------------FDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYV 305

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A + L  +     V  + +K   +    LFVA++ + M+++ G  D A+ +F+   
Sbjct: 306 SVLGACAHLDSHCLGRQVQCVTIKNCMD--ASLFVANATLDMHSKFGAIDDAKTLFNLIT 363

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            ++T  WN ++ G   N    EAI + ++ + LD +  D+V+F + ++A S ++  + G+
Sbjct: 364 YKDTVSWNALLVGLTHNEEDEEAIHM-LKGMNLDGVTPDEVSFATVINACSNIRATETGK 422

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H   +K+ +     V +++I+                      +V  N +I+  VQN 
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN 482

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE--GME 448
            +DE + L  ++ + G    S T +++LS  + L +  +GKQ H Y L+ G   +   + 
Sbjct: 483 REDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVG 542

Query: 449 SYLIDMYAKSGLIKTARQIF-EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             L+  Y K+ + + A ++  E  D   ++   W A+++GY QNG   ++ ++F +M  +
Sbjct: 543 VSLVGTYLKARMPEDANKLLIEMPDH--KNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSY 600

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +V P+ VT AS+L AC+ M  +  GK++HG  I+          +++IDMYSK G I  +
Sbjct: 601 DVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISS 660

Query: 568 ANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
              F ++  K  +T + +MILG+ ++G ++ AL LF+ M+   I+ D +TF+ VL AC++
Sbjct: 661 FEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAH 720

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGL+ EG   FD M + Y I P  +HY C  D+LGR G + EA E + EL    + + IW
Sbjct: 721 AGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGV-IW 779

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            + L +CR+H   E  E+ AK+L+E++ +NS    +VLLSN+YA  GNW      R+ MR
Sbjct: 780 ATYLAACRMHKDEERGEIAAKELVELEPQNSST--YVLLSNMYAAAGNWVEAKMAREAMR 837

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           E+G  K  GCSWI VG   + F  +D+ H  + +IYEML+ L   M
Sbjct: 838 EKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMM 883



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 241/541 (44%), Gaps = 77/541 (14%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D +  ++ L AC+    L  GK  HC   +       F   +L+NMY+ C    DA    
Sbjct: 30  DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR--- 86

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF  +   + V W +++S Y +  R+ EAV  F  M +MG  P 
Sbjct: 87  ---------------RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPD 131

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            ++ V V  AL++LG  + A     LL ++ +                            
Sbjct: 132 RVTCVAVVCALTALGRLEDART---LLHRMPAP--------------------------- 161

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
                  +T  WN +I GY Q +     +    + +    +     TF S LSA +    
Sbjct: 162 ------SSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATA 215

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
              G+Q+HA  +++ +   V V +++I                    E++VV WN M++ 
Sbjct: 216 FIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNG 275

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            V+N    E + +   M++ G   D  T  ++L A ++L +  +G+Q     +++ +   
Sbjct: 276 LVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDAS 335

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + +  +DM++K G I  A+ +F  N    +D  +WNA++ G T N   EEA    + M
Sbjct: 336 LFVANATLDMHSKFGAIDDAKTLF--NLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGM 393

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               VTP+ V+ A+V+ AC+ +   E GKQ+H  ++++ +  N  VG+SLID YSK G +
Sbjct: 394 NLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDV 453

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                V A++   + V    +I G  Q+   + A+ LF+ +   G++P + TF ++LS C
Sbjct: 454 ESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC 513

Query: 625 S 625
           +
Sbjct: 514 T 514



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 207/430 (48%), Gaps = 25/430 (5%)

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           VR  R     G+RP          A S LG   S    +    K G    +  F A++ +
Sbjct: 16  VRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRG--LGSGAFCAAALV 73

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA  G    AR++F      +T  W +MI GY +     EA+ LF ++ ++     D 
Sbjct: 74  NMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSP-DR 132

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFV-QN 389
           VT ++ + A++ L  L+  + L          +P            V+WN +IS +  Q+
Sbjct: 133 VTCVAVVCALTALGRLEDARTL-------LHRMPA-------PSSTVAWNAVISGYAQQS 178

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEG 446
           G++ E   L  +M+  G      T  ++LSAA+N      G+Q HA  +RHG+    F G
Sbjct: 179 GIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVG 238

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             S LI++YAK G I  A  +F+   SG+++   WNAM+ G  +N    EA   F  M  
Sbjct: 239 --SSLINLYAKCGCIGDAILVFDC--SGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKR 294

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             +  +  T  SVL AC  + +  LG+Q+   +I+  +D ++FV  + +DM+SK G I+ 
Sbjct: 295 LGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDD 354

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F  I  K++V++  +++G   +   E A+ + + M   G+ PD ++F  V++ACS 
Sbjct: 355 AKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSN 414

Query: 627 AGLVDEGLQI 636
               + G QI
Sbjct: 415 IRATETGKQI 424



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 1/158 (0%)

Query: 484 MIAGYTQNGLLEEAFV-AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           M    T    + +AFV A R      V P+   +A+ L AC+ +G +  GKQ H  + + 
Sbjct: 1   MAGATTSATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKR 60

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            L    F   +L++MY++ G +  A  VF  I   ++V + +MI GY + G  + A+ LF
Sbjct: 61  GLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLF 120

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             M+  G  PD +T VAV+ A +  G +++   +   M
Sbjct: 121 TRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRM 158


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/777 (29%), Positives = 407/777 (52%), Gaps = 50/777 (6%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
            T+ + +S +   GR   A  L   +  P+TV WN +I G   + L +  + LY  M+   
Sbjct: 261  TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320

Query: 101  PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
             + +    T++S+L A A  +    G+ +H   +    + + FV +SL+N+Y+ C    D
Sbjct: 321  LWPT--RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSD 378

Query: 161  AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            A+ V           +DL C+       +N+V WN +++ +V+ E   EA+R F+ M+R 
Sbjct: 379  AKNV-----------FDLSCE-------KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 420

Query: 221  GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
             ++    +FV++  A + L  +     V+ + +K   +    LFVA++ + MY++ G   
Sbjct: 421  TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI--SLFVANATLDMYSKYGAIG 478

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             A+ +F     +++  WN +  G  QN    EA+   ++ + L  I  DDV+F +A++A 
Sbjct: 479  DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAV-CMLKRMRLHGITPDDVSFSTAINAC 537

Query: 341  SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
            S ++  + G+Q+H   IK  +     V +++I+                      +V  N
Sbjct: 538  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597

Query: 381  TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
             +I+ FVQN  +DE + L  ++ K G    SVT +++LS  S   N  +GKQ H Y L+ 
Sbjct: 598  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657

Query: 441  GIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+ ++   +   L  +Y KS +++ A ++  +     ++   W A+I+GY QNG  + + 
Sbjct: 658  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIISGYAQNGYGDHSL 716

Query: 499  VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            V+F +M   NV  +  T ASVL AC+ +     GK++HG   +          ++LIDMY
Sbjct: 717  VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMY 776

Query: 559  SKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
            SK G +  +   F ++  K  +  + +MI+G+ ++G ++ AL LF+ M+   I+PD +TF
Sbjct: 777  SKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTF 836

Query: 618  VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            + VL AC+++GL+ EG   F  M++ Y + P  +HY C  D+LGR G + EA E + +L 
Sbjct: 837  LGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLP 896

Query: 678  EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
               + + +W + L +CR+H   E  ++ A+KL+E++ + S    +VLLS+++A  GNW  
Sbjct: 897  FRPDGV-VWATYLAACRMHKDEERGKIAARKLVELEPQYSST--YVLLSSLHAATGNWAE 953

Query: 738  VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
                R+ MRE+G+ K  GCSWI VG   + F  +D+ HP + +IYEML  L   M+ 
Sbjct: 954  AKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1010



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 282/638 (44%), Gaps = 106/638 (16%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-- 88
           SPP  +  + T R+   +I + G P L R L DS+     +   +  +G+  + L Y   
Sbjct: 65  SPPRAR-HSQTCRALHGRILRGGSPLLGR-LGDSLVE---LYCKSGRVGYAWSALGYAGE 119

Query: 89  ------AILLYSQMKKSSP--------YTSC------DNYTYSSVLKACAETRNLRIGKA 128
                 + LL    +  SP        Y  C      D +  + VL AC+    L  G+ 
Sbjct: 120 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 179

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VHC  ++   + S F   +L++MY+ C    +A                   +VFD +  
Sbjct: 180 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR------------------RVFDGIAC 221

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
            + + W+++++ Y +   Y EA+  F  M +MG  P  ++ V +   L+S G        
Sbjct: 222 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR------- 274

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
                                          D A  +       +T  WN +I G+ Q+ 
Sbjct: 275 ------------------------------LDHATALLKKMPTPSTVAWNAVISGHAQSG 304

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
                + L+  +     +     TF S LSA + ++    GQQ+HA  + + +   V V 
Sbjct: 305 LEFNVLGLYKDMRSWG-LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363

Query: 369 NAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +++I                    E+++V WN M++ FVQN L +E + +   M +    
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D  T  ++L A + L +  +GKQ H   +++ +     + +  +DMY+K G I  A+ +
Sbjct: 424 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 483

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F       +D  +WNA+  G  QN   EEA    ++M  H +TP+ V+ ++ + AC+ + 
Sbjct: 484 FSLIPY--KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             E GKQ+H  +I+Y +  N  VG+SLID+YSK G +  +  +FA++   + V    +I 
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           G+ Q+   + A+ LF+ +   G++P ++TF ++LS CS
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 231/452 (51%), Gaps = 26/452 (5%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMM-LRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           R   A ++++S + ++    + +  FR +    G RP       V  A S +G       
Sbjct: 120 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 179

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  +VK G  + + +F  ++ + MYA+ G    AR++FD     +T  W++MI  Y + 
Sbjct: 180 VHCDVVKSG--FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 237

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               EA+ LF ++ ++     D VT ++ +S ++    LD     HA  +   +  P   
Sbjct: 238 GCYQEALALFSRMDKMGSAP-DQVTLVTIISTLASSGRLD-----HATALLKKMPTP--- 288

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                    V+WN +IS   Q+GL+   L L  +M+  G      T  ++LSAA+N++  
Sbjct: 289 -------STVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 341

Query: 428 DVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
             G+Q HA  + HG+    F G  S LI++YAK G    A+ +F+   S +++   WNAM
Sbjct: 342 VEGQQMHAAAVMHGLDANVFVG--SSLINLYAKCGCPSDAKNVFDL--SCEKNIVMWNAM 397

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           + G+ QN L EEA   F+ M+ + +  +  T  S+L AC  + +  LGKQ+H  +I+  +
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D ++FV  + +DMYSK G I  A  +F+ IP K+S+++  + +G  Q+   E A+ + + 
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 517

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           M+  GI PD ++F   ++ACS     + G QI
Sbjct: 518 MRLHGITPDDVSFSTAINACSNIRATETGKQI 549



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 4/218 (1%)

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           R+    +  H  +LR G    G +   L+++Y KSG +  A        +G+R     ++
Sbjct: 70  RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSAL--GYAGERASGAASS 127

Query: 484 MIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++ + ++G   +   AFR +       P+   +A VL AC+ +G +  G+Q+H   ++ 
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
               +VF   +L+DMY+K G +  A  VF  I   +++ +++MI  Y + G  + AL+LF
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             M   G  PD +T V ++S  + +G +D    +   M
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/772 (31%), Positives = 400/772 (51%), Gaps = 55/772 (7%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G P  +R +FD++       WN +I  +  N L  E +  + +M  ++     D++TY  
Sbjct: 489  GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP-DHFTYPC 547

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            V+KACA   ++ IG AVH   ++       FV N+L++ Y T     DA           
Sbjct: 548  VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA----------- 596

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTIS 228
                    ++FD M  RN+V+WN+++  +       E+      M+         P   +
Sbjct: 597  -------LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 649

Query: 229  FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             V V P  +   +      V+G  VKL  +   +L + ++ + MY++ GC   A+ IF  
Sbjct: 650  LVTVLPVCAREREIGLGKGVHGWAVKLRLD--KELVLNNALMDMYSKCGCITNAQMIFKM 707

Query: 289  CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQELD 347
               +N   WNTM+GG+          ++  Q+L   E V  D+VT L+A+        L 
Sbjct: 708  NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 767

Query: 348  LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
              ++LH Y +K       +V NA +                     + V SWN +I    
Sbjct: 768  SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 827

Query: 388  QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            Q+      L    +M+  G + DS TV +LLSA S L++  +GK+ H +++R+ +  + +
Sbjct: 828  QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD-L 886

Query: 448  ESYL--IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
              YL  + +Y   G + T + +F+  +  D+   +WN +I GY QNG  + A   FRQM+
Sbjct: 887  FVYLSVLSLYIHCGELCTVQALFDAME--DKSLVSWNTVITGYLQNGFPDRALGVFRQMV 944

Query: 506  EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             + +    +++  V  AC+ + ++ LG++ H +++++LL+ + F+  SLIDMY+K+G I 
Sbjct: 945  LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 1004

Query: 566  YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             ++ VF  + EK++ ++  MI+GYG HG+++ A+ LF  M+  G  PD +TF+ VL+AC+
Sbjct: 1005 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 1064

Query: 626  YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV-KELGEEGNVLE 684
            ++GL+ EGL+  D M+  + ++P+ +HY CV DMLGR G++ +A   V +E+ EE +V  
Sbjct: 1065 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV-G 1123

Query: 685  IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
            IW SLL SCR+H + E+ E VA KL E++     P  +VLLSN+YA  G WE+V KVR+ 
Sbjct: 1124 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK--PENYVLLSNLYAGLGKWEDVRKVRQR 1181

Query: 745  MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M E  LRK+ GCSWI++   V  F   ++      +I  +   L M++   G
Sbjct: 1182 MNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 1233



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 196/401 (48%), Gaps = 29/401 (7%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           LV   +   ND  + +  I MYA  G  D +R +FD    +N   WN +I  Y +N    
Sbjct: 464 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 523

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           E +E F++++   +++ D  T+   + A + + ++ +G  +H  ++K  +   V V NA+
Sbjct: 524 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 583

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ----GF 407
           +                    ER++VSWN+MI  F  NG  +E  +L+ EM ++     F
Sbjct: 584 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 643

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
           M D  T+  +L   +  R   +GK  H + ++  +  E  + + L+DMY+K G I  A+ 
Sbjct: 644 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 703

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACN 524
           IF+ N+  +++  +WN M+ G++  G     F   RQML    +V  + VTI + +P C 
Sbjct: 704 IFKMNN--NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 761

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
               +   K+LH +S++     N  V  + +  Y+K G ++YA  VF  I  K   ++  
Sbjct: 762 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 821

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           +I G+ Q      +L     MK  G+ PD+ T  ++LSACS
Sbjct: 822 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/777 (29%), Positives = 407/777 (52%), Gaps = 50/777 (6%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
            T+ + +S +   GR   A  L   +  P+TV WN +I G   + L +  + LY  M+   
Sbjct: 261  TLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWG 320

Query: 101  PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
             + +    T++S+L A A  +    G+ +H   +    + + FV +SL+N+Y+ C    D
Sbjct: 321  LWPT--RSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSD 378

Query: 161  AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
            A+ V           +DL C+       +N+V WN +++ +V+ E   EA+R F+ M+R 
Sbjct: 379  AKNV-----------FDLSCE-------KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRY 420

Query: 221  GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
             ++    +FV++  A + L  +     V+ + +K   +    LFVA++ + MY++ G   
Sbjct: 421  TLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDI--SLFVANATLDMYSKYGAIG 478

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             A+ +F     +++  WN +  G  QN    EA+   ++ + L  I  DDV+F +A++A 
Sbjct: 479  DAKALFSLIPYKDSISWNALTVGLAQNLEEEEAV-CMLKRMRLHGITPDDVSFSTAINAC 537

Query: 341  SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
            S ++  + G+Q+H   IK  +     V +++I+                      +V  N
Sbjct: 538  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597

Query: 381  TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
             +I+ FVQN  +DE + L  ++ K G    SVT +++LS  S   N  +GKQ H Y L+ 
Sbjct: 598  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657

Query: 441  GIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+ ++   +   L  +Y KS +++ A ++  +     ++   W A+I+GY QNG  + + 
Sbjct: 658  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPD-HKNLFEWTAIISGYAQNGYGDHSL 716

Query: 499  VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            V+F +M   NV  +  T ASVL AC+ +     GK++HG   +          ++LIDMY
Sbjct: 717  VSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMY 776

Query: 559  SKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
            SK G +  +   F ++  K  +  + +MI+G+ ++G ++ AL LF+ M+   I+PD +TF
Sbjct: 777  SKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTF 836

Query: 618  VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            + VL AC+++GL+ EG   F  M++ Y + P  +HY C  D+LGR G + EA E + +L 
Sbjct: 837  LGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLP 896

Query: 678  EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
               + + +W + L +CR+H   E  ++ A+KL+E++ + S    +VLLS+++A  GNW  
Sbjct: 897  FRPDGV-VWATYLAACRMHKDEERGKIAARKLVELEPQYS--STYVLLSSLHAATGNWAE 953

Query: 738  VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
                R+ MRE+G+ K  GCSWI VG   + F  +D+ HP + +IYEML  L   M+ 
Sbjct: 954  AKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK 1010



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 282/638 (44%), Gaps = 106/638 (16%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-- 88
           SPP  +  + T R+   +I + G P L R L DS+     +   +  +G+  + L Y   
Sbjct: 65  SPPRAR-HSQTCRALHGRILRGGSPLLGR-LGDSLVE---LYCKSGRVGYAWSALGYAGE 119

Query: 89  ------AILLYSQMKKSSP--------YTSC------DNYTYSSVLKACAETRNLRIGKA 128
                 + LL    +  SP        Y  C      D +  + VL AC+    L  G+ 
Sbjct: 120 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 179

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VHC  ++   + S F   +L++MY+ C    +A                   +VFD +  
Sbjct: 180 VHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNAR------------------RVFDGIAC 221

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
            + + W+++++ Y +   Y EA+  F  M +MG  P  ++ V +   L+S G        
Sbjct: 222 PDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR------- 274

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
                                          D A  +       +T  WN +I G+ Q+ 
Sbjct: 275 ------------------------------LDHATALLKKMPTPSTVAWNAVISGHAQSG 304

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
                + L+  +     +     TF S LSA + ++    GQQ+HA  + + +   V V 
Sbjct: 305 LEFNVLGLYKDMRSWG-LWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVG 363

Query: 369 NAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +++I                    E+++V WN M++ FVQN L +E + +   M +    
Sbjct: 364 SSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQ 423

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D  T  ++L A + L +  +GKQ H   +++ +     + +  +DMY+K G I  A+ +
Sbjct: 424 TDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKAL 483

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F       +D  +WNA+  G  QN   EEA    ++M  H +TP+ V+ ++ + AC+ + 
Sbjct: 484 FSLIPY--KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             E GKQ+H  +I+Y +  N  VG+SLID+YSK G +  +  +FA++   + V    +I 
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           G+ Q+   + A+ LF+ +   G++P ++TF ++LS CS
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 231/452 (51%), Gaps = 26/452 (5%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMM-LRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           R   A ++++S + ++    + +  FR +    G RP       V  A S +G       
Sbjct: 120 RASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQ 179

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  +VK G  + + +F  ++ + MYA+ G    AR++FD     +T  W++MI  Y + 
Sbjct: 180 VHCDVVKSG--FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRV 237

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               EA+ LF ++ ++     D VT ++ +S ++    LD     HA  +   +  P   
Sbjct: 238 GCYQEALALFSRMDKMGSAP-DQVTLVTIISTLASSGRLD-----HATALLKKMPTP--- 288

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                    V+WN +IS   Q+GL+   L L  +M+  G      T  ++LSAA+N++  
Sbjct: 289 -------STVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAF 341

Query: 428 DVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
             G+Q HA  + HG+    F G  S LI++YAK G    A+ +F+   S +++   WNAM
Sbjct: 342 VEGQQMHAAAVMHGLDANVFVG--SSLINLYAKCGCPSDAKNVFDL--SCEKNIVMWNAM 397

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           + G+ QN L EEA   F+ M+ + +  +  T  S+L AC  + +  LGKQ+H  +I+  +
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCM 457

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D ++FV  + +DMYSK G I  A  +F+ IP K+S+++  + +G  Q+   E A+ + + 
Sbjct: 458 DISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKR 517

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           M+  GI PD ++F   ++ACS     + G QI
Sbjct: 518 MRLHGITPDDVSFSTAINACSNIRATETGKQI 549



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 4/218 (1%)

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           R+    +  H  +LR G    G +   L+++Y KSG +  A        +G+R     ++
Sbjct: 70  RHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSAL--GYAGERASGAASS 127

Query: 484 MIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++ + ++G   +   AFR +       P+   +A VL AC+ +G +  G+Q+H   ++ 
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
               +VF   +L+DMY+K G +  A  VF  I   +++ +++MI  Y + G  + AL+LF
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALF 247

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             M   G  PD +T V ++S  + +G +D    +   M
Sbjct: 248 SRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/638 (34%), Positives = 362/638 (56%), Gaps = 34/638 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLG 240
           +F +++R +V  +N ++  +   E    ++  F  + +   ++P++ ++     A S   
Sbjct: 74  IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D ++  V++G  V  G +  ++L + S+ + MY +    + ARK+FD   E++T +WNTM
Sbjct: 134 DDRAGRVIHGQAVVDGCD--SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA------ 354
           I GY +N   VE+I++F  ++       D  T L  L AV++LQEL LG Q+H+      
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251

Query: 355 -----YIIKNFVAL----PVIVLNAVIER-----DVVSWNTMISAFVQNGLDDEGLMLVY 400
                Y++  F++L      I + + + R     D+V++N MI  +  NG  +  L L  
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
           E+   G  + S T+ +L+  + +L    +    H Y L+   +    + + L  +Y+K  
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I++AR++F  ++S ++   +WNAMI+GYTQNGL E+A   FR+M +   +PN VTI  +
Sbjct: 369 EIESARKLF--DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G + LGK +H        + +++V T+LI MY+K G I  A  +F  + +KN 
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           VT+ TMI GYG HG  + AL++F  M   GI P  +TF+ VL ACS+AGLV EG +IF+ 
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGH 698
           M   Y  +PS +HY C+ D+LGR G +  A +F++ +  E G+   +W +LLG+CR+H  
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS--SVWETLLGACRIHKD 604

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           + LA  V++KL E+D  N   GYHVLLSNI++ + N+     VR+  ++R L K  G + 
Sbjct: 605 TNLARTVSEKLFELDPDN--VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           I++G   + F S DQ HPQ  +IYE LE+L  +MR AG
Sbjct: 663 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 292/609 (47%), Gaps = 61/609 (10%)

Query: 44  SRLSKICQE----GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           S L+K+ Q     G  + AR +F S+ RP   ++N ++ GF  N  P+ ++ +++ ++KS
Sbjct: 53  SLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKS 112

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
           +     ++ TY+  + A +  R+ R G+ +H   +    +    + ++++ MY       
Sbjct: 113 TDLKP-NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY------- 164

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
                  K+  V+ ++     KVFD M  ++ + WNT++S Y K E YVE+++ FR ++ 
Sbjct: 165 ------FKFWRVEDAR-----KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213

Query: 220 MG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
               R  T + +++ PA++ L + +    ++ L  K G  Y +D +V +  I +Y++ G 
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHD-YVLTGFISLYSKCGK 271

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
                 +F    + +   +N MI GY  N     ++ LF +++ L        T +S + 
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSLVP 330

Query: 339 AVSQLQELDLGQQLHAYIIK-NFV-------ALPVI------------VLNAVIERDVVS 378
               L    L   +H Y +K NF+       AL  +            + +   E+ + S
Sbjct: 331 VSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN MIS + QNGL ++ + L  EMQK  F  + VT+T +LSA + L    +GK  H   L
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD--L 445

Query: 439 RHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
                FE    + + LI MYAK G I  AR++F+      +++ TWN MI+GY  +G  +
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK--KNEVTWNTMISGYGLHGQGQ 503

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSL 554
           EA   F +ML   +TP  VT   VL AC+  G ++ G ++    I RY  + +V     +
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563

Query: 555 IDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           +D+  ++G +  A      +  E  S  + T++     H  +  A ++  S K   ++PD
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV--SEKLFELDPD 621

Query: 614 AITFVAVLS 622
            + +  +LS
Sbjct: 622 NVGYHVLLS 630


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 238/736 (32%), Positives = 391/736 (53%), Gaps = 58/736 (7%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR----IGKA 128
           WN+II  FV   L  +A+  Y +M       S D  T+  ++KAC   +N +    +   
Sbjct: 102 WNSIISSFVRMGLLNQALAFYFKMLCFG--VSPDVSTFPCLVKACVALKNFKGIEFLSDT 159

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           V    + C    + FV +SL+  Y                  ++Y K D+  K+FD + +
Sbjct: 160 VSSLGMDC----NEFVASSLIKAY------------------LEYGKIDVAGKLFDRVLQ 197

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           ++ V WN +++ Y K       ++ F +M    I P+ ++F  V    +S         +
Sbjct: 198 KDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 257

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +GL+V  G ++     + +S + MY++ G FD A K+F      +T  WN MI GYVQ+ 
Sbjct: 258 HGLVVVSGLDFEGS--IKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSG 315

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              E++  F +++    ++ D +TF S L +VS+ + L+  +Q+H YI+++ ++L + + 
Sbjct: 316 LMEESLIFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLT 374

Query: 369 NAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A+I+                     DVV +  MIS ++ NGL+ + L +   + K    
Sbjct: 375 SALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKIS 434

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            + +T+ ++L     L    +G++ H ++++ G      +   +IDMYAK G +  A +I
Sbjct: 435 PNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 494

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F +     RD  +WN+MI    Q+     A   FRQM    +  + V+I++ L AC  + 
Sbjct: 495 FGR--LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLP 552

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +   GK +HGF I++ L  +V+  ++LIDMY+K G +  A NVF  + EKN V++ ++I 
Sbjct: 553 SESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIA 612

Query: 588 GYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            YG HG  + +L LF  M +  G  PD ITF+ ++S C + G VDEG++ F  M Q+Y I
Sbjct: 613 AYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI 672

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           QP  EHY CV D+ GR G++ EAYE VK +    +   +WG+LLG+ RLH + ELA+V +
Sbjct: 673 QPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDA-GVWGTLLGASRLHKNVELAKVAS 731

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
            +L+++D  NS  GY+VL+SN +A  G WE+V KVR  M+ER ++K  G SWI++    +
Sbjct: 732 SRLMDLDPWNS--GYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITH 789

Query: 767 RFASKDQEHPQSHKIY 782
            F S D  HP+S  IY
Sbjct: 790 LFVSGDVNHPESSHIY 805



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 175/608 (28%), Positives = 299/608 (49%), Gaps = 45/608 (7%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S +L+ C+    LR GK VH   I    +   +    +L MY+ C S  +    G  +  
Sbjct: 35  SLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNC---GKMFYR 91

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           +D              R  ++  WN+I+S +V+     +A+  +  ML  G+ P   +F 
Sbjct: 92  LD-------------SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFP 138

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A  +L ++K  + +   +  LG +  N+ FVASS I  Y E G  D A K+FD  L
Sbjct: 139 CLVKACVALKNFKGIEFLSDTVSSLGMD-CNE-FVASSLIKAYLEYGKIDVAGKLFDRVL 196

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +++  +WN M+ GY +       I+ F  ++ +D+I  + VTF   LS  +    +DLG 
Sbjct: 197 QKDCVIWNVMLNGYAKCGASDSVIKGF-SLMRMDQISPNAVTFDCVLSVCASKLLIDLGV 255

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           QLH  ++ + +     + N+++                      D V+WN MIS +VQ+G
Sbjct: 256 QLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSG 315

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
           L +E L+  YEM   G + D++T ++LL + S   N +  +Q H Y++RH I  +  + S
Sbjct: 316 LMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTS 375

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID Y K   +  A++IF + +S   D   + AMI+GY  NGL  +A   FR +++  +
Sbjct: 376 ALIDAYFKCRGVSMAQKIFSQCNS--VDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKI 433

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           +PN +T+ S+LP    +  ++LG++LHGF I+   D    +G ++IDMY+K G +N A  
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 493

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F ++ +++ V++ +MI    Q      A+ +FR M   GI  D ++  A LSAC+    
Sbjct: 494 IFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPS 553

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
              G  I   M + + +         + DM  + G +  A      + +E N++  W S+
Sbjct: 554 ESFGKAIHGFMIK-HSLALDVYSESTLIDMYAKCGNLKAAMNVFDTM-KEKNIVS-WNSI 610

Query: 690 LGSCRLHG 697
           + +   HG
Sbjct: 611 IAAYGNHG 618



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 266/546 (48%), Gaps = 48/546 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  +A +LFD + +   VIWN ++ G+         I  +S M+      S +  T+  
Sbjct: 183 GKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQ--ISPNAVTFDC 240

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL  CA    + +G  +H   +    +    + NSLL+MYS C                 
Sbjct: 241 VLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKC----------------- 283

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             ++D   K+F  M R + V WN ++S YV++    E++  F  M+  G+ P  I+F ++
Sbjct: 284 -GRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSL 342

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P++S   + +    ++  +++       D+F+ S+ I  Y +      A+KIF  C   
Sbjct: 343 LPSVSKFENLEYCRQIHCYIMRHSISL--DIFLTSALIDAYFKCRGVSMAQKIFSQCNSV 400

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  V+  MI GY+ N   ++A+E+F  ++++ +I  +++T +S L  +  L  L LG++L
Sbjct: 401 DVVVFTAMISGYLHNGLNIDALEMFRWLVKV-KISPNEITLVSILPVIGGLLALKLGREL 459

Query: 353 HAYIIKNF------VALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H +IIK        +   VI              +   + +RD+VSWN+MI+   Q+   
Sbjct: 460 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNP 519

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
              + +  +M   G   D V+++A LSA +NL ++  GK  H ++++H +  +   ES L
Sbjct: 520 SAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTL 579

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT- 510
           IDMYAK G +K A  +F+     +++  +WN++IA Y  +G L+++   F +M+E +   
Sbjct: 580 IDMYAKCGNLKAAMNVFDTMK--EKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNR 637

Query: 511 PNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           P+ +T   ++  C  +G+++ G +     +  Y +         ++D++ ++G ++ A  
Sbjct: 638 PDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYE 697

Query: 570 VFAKIP 575
               +P
Sbjct: 698 TVKSMP 703



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 240/487 (49%), Gaps = 49/487 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + GR   A +LF  ++R  TV WN +I G+V + L  E+++ + +M  S    
Sbjct: 275 SLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLP 334

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D  T+SS+L + ++  NL   + +HC+ +R   +   F+ ++L++ Y  C     A+ 
Sbjct: 335 --DAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ- 391

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            K+F      +VV +  ++S Y+     ++A+  FR ++++ I 
Sbjct: 392 -----------------KIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKIS 434

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I+ V++ P +  L   K    ++G ++K G  + N   +  + I MYA+ G  + A 
Sbjct: 435 PNEITLVSILPVIGGLLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAY 492

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +IF    +R+   WN+MI    Q+++P  AI++F Q + +  I FD V+  +ALSA + L
Sbjct: 493 EIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ-MGVSGICFDCVSISAALSACANL 551

Query: 344 QELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMI 383
                G+ +H ++IK+ +AL V                     V + + E+++VSWN++I
Sbjct: 552 PSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSII 611

Query: 384 SAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HG 441
           +A+  +G   + L L +EM +K G   D +T   ++S   ++ + D G +    + + +G
Sbjct: 612 AAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYG 671

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           I  +  E Y  ++D++ ++G +  A +   K+     D   W  ++     +  +E A V
Sbjct: 672 IQPQ-QEHYACVVDLFGRAGRLSEAYETV-KSMPFPPDAGVWGTLLGASRLHKNVELAKV 729

Query: 500 AFRQMLE 506
           A  ++++
Sbjct: 730 ASSRLMD 736



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 24/339 (7%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           ++ LL   SNL     GKQ HA+++ + I  +   +  ++ MYA  G      ++F + D
Sbjct: 34  LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           S       WN++I+ + + GLL +A   + +ML   V+P+V T   ++ AC  + N + G
Sbjct: 94  SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 152

Query: 533 KQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            +    ++  L +D N FV +SLI  Y + G I+ A  +F ++ +K+ V +  M+ GY +
Sbjct: 153 IEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAK 212

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKI 646
            G S+  +  F  M+   I P+A+TF  VLS C+   L+D G+Q+  L     +  E  I
Sbjct: 213 CGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSI 272

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH--SELAEV 704
           + S      +  M  + G+  +A +  + +     V   W     +C + G+  S L E 
Sbjct: 273 KNS------LLSMYSKCGRFDDAIKLFRMMSRADTV--TW-----NCMISGYVQSGLMEE 319

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
                 EM +   +P   +  S++      +EN++  R+
Sbjct: 320 SLIFFYEMISSGVLPD-AITFSSLLPSVSKFENLEYCRQ 357


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/730 (32%), Positives = 383/730 (52%), Gaps = 55/730 (7%)

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY---SSVLKACAETRNLRI 125
           +  +WN++        LP EA+ +Y++M +S      D+ T+        A A+  +   
Sbjct: 79  SAFLWNSLSRALASAALPCEALRVYNRMVRSG--VRPDDRTFPFALHAAAAVAQAEHPAK 136

Query: 126 GKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           G  +H   +R        F  N+L+  Y+ C  + DA                   +VFD
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADAR------------------RVFD 178

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M  R+VV+WN++VS  +      +A R    M+R G+  +  S V++ PA  +  D   
Sbjct: 179 EMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGF 238

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              V+GL++K G   V +L   ++ + MY + G  + +  +F+   E+N   WN+ IG +
Sbjct: 239 GLCVHGLVLKFGLNSVVNL--GNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCF 296

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
                  + +E+F  + E D +    VT  S L A+  L    LG++LH Y I+  V   
Sbjct: 297 AHAGFHEDVLEMFRLMSEHD-VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESD 355

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + + N +++                    R+VVSWN MI+   QNG + E   LV EMQK
Sbjct: 356 IFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQK 415

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
            G   +S T+  LL A S + +  +GKQ HA+ +R  +  +  + + LID+YAK G +  
Sbjct: 416 NGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNL 475

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR IF++++   +D  ++N +I GY+Q+    E+   F+QM    +  + V+    L AC
Sbjct: 476 ARYIFDRSE---KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSAC 532

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           + +   + GK++HG  ++ LLD + F+  SL+D+Y+K G+++ A+ +F +I +K+  ++ 
Sbjct: 533 SNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWN 592

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           TMILGYG HG  + A  LF  MK  GIE D ++++AVLS CS+ GLVD G + F  M  +
Sbjct: 593 TMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQ 652

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
             I+P   HY C+ D+LGR G++ E+ E ++ +    N  ++WG+LLGSCR+HG  ELA 
Sbjct: 653 -NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANS-DVWGALLGSCRIHGDIELAR 710

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           + A+ L E+   NS  GY+ LL N+Y+E G W   + V+K M+ R ++K    SW+  G 
Sbjct: 711 LAAEHLFELKPENS--GYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGN 768

Query: 764 YVNRFASKDQ 773
            +  F   D+
Sbjct: 769 KLQAFLVGDE 778



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 241/486 (49%), Gaps = 45/486 (9%)

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF-----------VNVFPA 235
           R R+   WN++           EA+R +  M+R G+RP   +F               PA
Sbjct: 76  RLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPA 135

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             +  +  +A +  GLL+        D+F  ++ +  YA  G    AR++FD    R+  
Sbjct: 136 KGA--ELHAAALRRGLLLA-------DVFAGNTLVTFYAVCGRAADARRVFDEMPARDVV 186

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+++   + N    +A    V ++    +  +  + +S L A    ++   G  +H  
Sbjct: 187 SWNSLVSALLTNGMLEDAKRAVVGMMR-SGVPVNVASLVSILPACGTERDEGFGLCVHGL 245

Query: 356 IIK------------------NFVAL--PVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           ++K                   F  L   + V N + E++ VSWN+ I  F   G  ++ 
Sbjct: 246 VLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDV 305

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L +   M +      SVT+++LL A  +L    +GK+ H Y +R  +  +  + + L+DM
Sbjct: 306 LEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDM 365

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G  + A  IFE  +   R+  +WNAMIA  TQNG   EAF    +M ++   PN  
Sbjct: 366 YAKFGCSEKASAIFENIEV--RNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSF 423

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+ ++LPAC+ + ++++GKQ+H +SIR  L  ++FV  +LID+Y+K G +N A  +F + 
Sbjct: 424 TLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR- 482

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            EK+ V+Y T+I+GY Q      +L LF+ M+  GIE DA++F+  LSACS      +G 
Sbjct: 483 SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGK 542

Query: 635 QIFDLM 640
           +I  ++
Sbjct: 543 EIHGVL 548



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 271/567 (47%), Gaps = 46/567 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR++FD +     V WN+++   + N +  +A      M +S      +  +  S
Sbjct: 168 GRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSG--VPVNVASLVS 225

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC   R+   G  VH   ++   N    + N+L++MY              K+ +++
Sbjct: 226 ILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYG-------------KFGDLE 272

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S +     VF+ M+ +N V+WN+ +  +     + + +  FR+M    + P +++  ++
Sbjct: 273 SSMH-----VFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSL 327

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PAL  LG +     ++G  ++   E  +D+F+A++ + MYA+ GC + A  IF+N   R
Sbjct: 328 LPALVDLGYFHLGKELHGYSIRRAVE--SDIFIANTLMDMYAKFGCSEKASAIFENIEVR 385

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN MI    QN    EA  L +++ +  E   +  T ++ L A S++  + +G+Q+
Sbjct: 386 NVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECP-NSFTLVNLLPACSRVASVKMGKQI 444

Query: 353 HAYIIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLDD 393
           HA+ I+  +   + V NA+I                   E+D VS+NT+I  + Q+    
Sbjct: 445 HAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVSYNTLIVGYSQSQCCF 504

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L  +M+  G   D+V+    LSA SNL     GK+ H  L++  +     + + L+
Sbjct: 505 ESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLL 564

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+Y K G++ TA +IF  N    +D A+WN MI GY  +G ++ AF  F  M +  +  +
Sbjct: 565 DVYTKGGMLDTASKIF--NRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYD 622

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            V+  +VL  C+  G ++ GK+     I   +         ++D+  ++G ++ +A +  
Sbjct: 623 HVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIR 682

Query: 573 KIP-EKNSVTYTTMILGYGQHGMSERA 598
            +P   NS  +  ++     HG  E A
Sbjct: 683 NMPFRANSDVWGALLGSCRIHGDIELA 709


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 245/782 (31%), Positives = 402/782 (51%), Gaps = 53/782 (6%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR +FD I  P  V W++++  +  N +P +A+L +  M+       C+ +    VL
Sbjct: 53  PSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRG--VPCNEFALPVVL 110

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K CA   ++R G  VH   +        FV N+L+ +Y            G   V+    
Sbjct: 111 K-CAP--DVRFGAQVHALAVATRLVHDVFVANALVAVYG-----------GFGMVDEARR 156

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
            +D    V      RN V+WNT++S YVK ++  +A+  FR M+  G RP+   F  V  
Sbjct: 157 MFDEYVGVGG---ERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVN 213

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +   D ++   V+G +V+ G  Y  D+F A++ + MY++LG  + A  +F+     + 
Sbjct: 214 ACTGSRDLEAGRQVHGAVVRTG--YEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADV 271

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN  I G V + H   A+EL +Q ++   +V +  T  S L A +     +LG+Q+H 
Sbjct: 272 VSWNAFISGCVTHGHDHRALELLLQ-MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 355 YIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           +++K       FVA+ ++              V + +  RD++ WN +IS    +G   E
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390

Query: 395 GLMLVYEMQKQGFMID--SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            L L + M+K+G  +D    T+ ++L + ++       +Q HA   + G+  +  + + L
Sbjct: 391 VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGL 450

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ID Y K G +  A ++F+++ S D   +T   M+   +Q    E+A   F QML   + P
Sbjct: 451 IDSYWKCGQLDYAIKVFKESRSDDIISST--TMMTALSQCDHGEDAIKLFVQMLRKGLEP 508

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +   ++S+L AC  +   E GKQ+H   I+     +VF G +L+  Y+K G I  A   F
Sbjct: 509 DSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAF 568

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           + +PE+  V+++ MI G  QHG  +RAL LF  M   G+ P+ IT  +VLSAC++AGLVD
Sbjct: 569 SGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVD 628

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +  + F+ M++ + I  + EHY C+ D+LGR GK+ +A E V  +  + N   +WG+LLG
Sbjct: 629 DAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANA-AVWGALLG 687

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           + R+H   EL  + A+KL  ++   S  G HVLL+N YA  G W+ + KVRK M++  ++
Sbjct: 688 ASRVHRDPELGRMAAEKLFTLEPEKS--GTHVLLANTYASAGMWDEMAKVRKLMKDSNVK 745

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG---NKTIQNSNVDAT 808
           KE   SW+++   V+ F   D+ HP +  IY  L  L   M  AG   N  +   +VD +
Sbjct: 746 KEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRS 805

Query: 809 PR 810
            +
Sbjct: 806 EK 807



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 207/468 (44%), Gaps = 68/468 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +A  +F+ +     V WN  I G V +   + A+ L  QMK S    +   +T SS
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNV--FTLSS 311

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKACA      +G+ +H   ++  ++   FV   L++MY+             K+  +D
Sbjct: 312 VLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYA-------------KHGFLD 358

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPSTISFV 230
            ++     KVFD M RR+++ WN ++S      R+ E +  F  M + G  +  +  +  
Sbjct: 359 DAR-----KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLA 413

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  + +S         V+ L  K+G   ++D  V +  I  Y + G  D+A K+F    
Sbjct: 414 SVLKSTASSEAICHTRQVHALAEKIG--LLSDSHVINGLIDSYWKCGQLDYAIKVFKESR 471

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +     TM+    Q +H  +AI+LFVQ+L    +  D     S L+A + L   + G+
Sbjct: 472 SDDIISSTTMMTALSQCDHGEDAIKLFVQMLR-KGLEPDSFVLSSLLNACTSLSAYEQGK 530

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           Q+HA++IK      V   NA++                    ER +VSW+ MI    Q+G
Sbjct: 531 QVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHG 590

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM--- 447
                L L + M  +G   + +T+T++LSA ++    D  K+          +FE M   
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKK----------YFESMKET 640

Query: 448 -------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
                  E Y  +ID+  ++G ++ A ++   N     + A W A++ 
Sbjct: 641 FGIDRTEEHYACMIDILGRAGKLEDAMELV-NNMPFQANAAVWGALLG 687



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS--LIDMYSKSGVINYAANVFA 572
           TI S L       ++  G  LH     +LL   +  G S  L+ +YS+  + + A  VF 
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHS----HLLKSGLLAGFSNHLLTLYSRCRLPSAARAVFD 61

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           +IP+   V++++++  Y  +GM   AL  FR+M+G G+  +      VL
Sbjct: 62  EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVL 110


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/766 (30%), Positives = 411/766 (53%), Gaps = 50/766 (6%)

Query: 53  GRPHLARQLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           GR  LA+ +F+S+     V+ WN++I G++ N    ++I ++ +M+        D+ T +
Sbjct: 104 GRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMF--DHTTLA 161

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
             LK C+   +  +G  +H   ++   +      ++L++MY+ C S  D+          
Sbjct: 162 VSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDS---------- 211

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     VF  +  +N ++W+  ++  V+ ++ +  ++ F+ M R GI  S  ++ +
Sbjct: 212 --------LDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           VF + + L   +    ++   +K  +++ +D+ V ++ + MYA+      A K+F    +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALK--TDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPD 321

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            N + +N MI GY +N    +A +LF+Q L+ +   FD+V+   ALSA + ++    G Q
Sbjct: 322 HNLQSYNAMIIGYARNEQGFQAFKLFLQ-LQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ 380

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           LH   IK+ ++  + V NA+++                    RD VSWN +I+A  QN  
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
           + + L     M +     D  T  ++L A +  R    G + H  +++ G+  +  + S 
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSA 500

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY+K G+++ A +I  + +  ++   +WNA+I+G++     E++   F  MLE  V 
Sbjct: 501 LVDMYSKCGMMEEAEKIHYRLE--EQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T A+VL  C  +  + LGKQ+H   I+  L  +V++ ++L+DMYSK G ++ +  +
Sbjct: 559 PDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLM 618

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F K P+++SVT+  MI G+  HG+ E AL LF  M    I+P+  TFV+VL ACS+ G  
Sbjct: 619 FRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNA 678

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            +GL  F  M   Y ++P  EHY C+ D+LGR G+V EA   ++++  E + + IW +LL
Sbjct: 679 KKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAI-IWRTLL 737

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
             C++ G+ E+AE  A  LL++D  +S    + LLSNIYA+ G W+ V K+R+ MR   L
Sbjct: 738 SICKIQGNVEVAEKAASSLLKLDPEDSSA--YTLLSNIYADAGMWQQVSKIRQTMRSHNL 795

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +KE GCSWI+V   V+ F   D+ HP+   IY +L+ L  +MR +G
Sbjct: 796 KKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 841



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 165/659 (25%), Positives = 297/659 (45%), Gaps = 50/659 (7%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+S + + C+  R L+ GK  H H I     P+ FV N L+ MY  C +   A  V  + 
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 169 VEVDY-------------SKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQF 214
            + D               + +L   VF++M    +VV+WN+++S Y++     +++  F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
             M  +G+     +        S L D      ++G+ V++G +Y  D+   S+ + MYA
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDY--DVVTGSALVDMYA 203

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           +    + +  +F    ++N   W+  I G VQN+  +  ++LF + ++   I     T+ 
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKE-MQRKGIGVSQSTYA 262

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
           S   + + L    LG QLH + +K      VIV  A +                    + 
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           ++ S+N MI  + +N    +   L  ++QK  F  D V+++  LSAA+ ++    G Q H
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
              ++  +     + + ++DMY K G +  A  +F++ +   RD  +WNA+I    QN  
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEI--RDPVSWNAIITACEQNES 440

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             +    F  ML   + P+  T  SVL AC        G ++HG  I+  +   +FVG++
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSA 500

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L+DMYSK G++  A  +  ++ E+  V++  +I G+     SE +   F  M   G+EPD
Sbjct: 501 LVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPD 560

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYE 671
             T+  VL  C+    V  G QI     Q  K++  ++ Y    + DM  + G + ++  
Sbjct: 561 NFTYATVLDTCANLATVGLGKQIH---AQMIKLELLSDVYITSTLVDMYSKCGNMHDSLL 617

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             ++  +  +V   W +++     HG  E A  + + +L     N  P +   +S + A
Sbjct: 618 MFRKAPKRDSV--TWNAMICGFAYHGLGEEALELFEHMLH---ENIKPNHATFVSVLRA 671


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/746 (32%), Positives = 378/746 (50%), Gaps = 89/746 (11%)

Query: 68  PTTVIW-NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           P++V W N +I   +    P +   LY QMK S  +T  D+YT+  V KACA   +L +G
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMK-SLGWTP-DHYTFPFVFKACANLSSLSLG 278

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
            ++H    R     + FV N++++MY  C +   A                    +FD +
Sbjct: 279 ASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAH------------------NMFDDL 320

Query: 187 RRRNV---VAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDY 242
             R +   V+WN++VS Y+       A+  F +M  R  + P  IS VN+ PA +SL   
Sbjct: 321 CHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAAS 380

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                V+G  ++ G   V+D+FV ++ + MYA+ G  + A K+F     ++   WN M+ 
Sbjct: 381 LRGRQVHGFSIRSG--LVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVT 438

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GY Q      A+ LF ++ E +                                      
Sbjct: 439 GYSQAGRLEHALSLFERMTEEN-------------------------------------- 460

Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                    IE DVV+W  +I+ + Q G   E L +  +M   G   + VT+ +LLSA  
Sbjct: 461 ---------IELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACV 511

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGME---------SYLIDMYAKSGLIKTARQIFEKNDS 473
           ++     GK+TH Y ++  ++ +G +         + LIDMYAK    + AR++F+    
Sbjct: 512 SVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSP 571

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIEL 531
            DRD  TW  MI GY Q+G    A   F  M  ++ ++ PN  T++  L AC  +  +  
Sbjct: 572 KDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRF 631

Query: 532 GKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           G+Q+H + +R       +FV   LIDMYSKSG ++ A  VF  +P++N+V++T+++ GYG
Sbjct: 632 GRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYG 691

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG  E AL +F  M+   + PD ITF+ VL ACS++G+VD G+  F+ M +++ + P  
Sbjct: 692 MHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGP 751

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           EHY C+ D+ GR G++ EA + + E+  E   + +W +LL +CRLH + EL E  A +LL
Sbjct: 752 EHYACMVDLWGRAGRLGEAMKLINEMPMEPTPV-VWVALLSACRLHSNVELGEFAANRLL 810

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E+++ N   G + LLSNIYA    W++V ++R  M+  G++K  GCSWI     V  F  
Sbjct: 811 ELESGND--GSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYV 868

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D+ HPQS +IYE L  L   ++  G
Sbjct: 869 GDRSHPQSQQIYETLADLIQRIKAIG 894



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 149/291 (51%), Gaps = 5/291 (1%)

Query: 355 YIIKNFVALPVIVLNAV--IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
           YI  N  A  +++L  +      V  WN +I   +  G   +   L  +M+  G+  D  
Sbjct: 201 YIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHY 260

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK- 470
           T   +  A +NL +  +G   HA + R G      + + ++ MY K G ++ A  +F+  
Sbjct: 261 TFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDL 320

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNI 529
              G +D  +WN++++ Y        A   F +M   H ++P+V+++ ++LPAC  +   
Sbjct: 321 CHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAAS 380

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G+Q+HGFSIR  L  +VFVG +++DMY+K G +  A  VF ++  K+ V++  M+ GY
Sbjct: 381 LRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGY 440

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            Q G  E ALSLF  M    IE D +T+ AV++  +  G   E L +F  M
Sbjct: 441 SQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 130/544 (23%), Positives = 224/544 (41%), Gaps = 121/544 (22%)

Query: 58  ARQLFDSITR---PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +FD +        V WN+++  ++  +    A+ L+ +M  +    S D  +  ++L
Sbjct: 313 AHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMT-TRHLMSPDVISLVNIL 371

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            ACA       G+ VH   IR       FV N++++MY+ C                   
Sbjct: 372 PACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKC------------------G 413

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY--------------------------- 207
           K +   KVF  M+ ++VV+WN +V+ Y +  R                            
Sbjct: 414 KMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVIT 473

Query: 208 --------VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL---- 255
                    EA+  FR M   G RP+ ++ V++  A  S+G        +   +K     
Sbjct: 474 GYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNL 533

Query: 256 --GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPV 311
                  +DL V +  I MYA+    + ARK+FD+   ++ +V  W  MIGGY Q+    
Sbjct: 534 DGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDAN 593

Query: 312 EAIELFVQVLELDE-IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF---------- 360
            A++LF  + ++D+ I  +D T   AL A ++L  L  G+Q+HAY+++NF          
Sbjct: 594 NALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVAN 653

Query: 361 -----------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                      V    IV + + +R+ VSW ++++ +  +G  ++ L +  EM+K   + 
Sbjct: 654 CLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVP 713

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D +T   +L A S           H+ ++ HGI+F    S                    
Sbjct: 714 DGITFLVVLYACS-----------HSGMVDHGINFFNRMS-------------------- 742

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           K+   D     +  M+  + + G L EA     +M    + P  V   ++L AC    N+
Sbjct: 743 KDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEM---PMEPTPVVWVALLSACRLHSNV 799

Query: 530 ELGK 533
           ELG+
Sbjct: 800 ELGE 803



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 183/435 (42%), Gaps = 55/435 (12%)

Query: 51  QEGRPHLARQLFDSITRPT----TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           Q GR   A  LF+ +T        V W  +I G+       EA+ ++ QM       +  
Sbjct: 442 QAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNV- 500

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN--------PSRFVYNSLLNMYSTCLSS 158
             T  S+L AC     L  GK  HC+ I+   N            V N L++MY+ C S+
Sbjct: 501 -VTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQST 559

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                             ++  K+FD++  + R+VV W  ++  Y +      A++ F  
Sbjct: 560 ------------------EVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSG 601

Query: 217 MLRM--GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFM 272
           M +M   I+P+  +      A + L   +    V+  +++   GS     LFVA+  I M
Sbjct: 602 MFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVM---LFVANCLIDM 658

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G  D A+ +FDN  +RN   W +++ GY  +    +A+ +F ++ ++  +V D +T
Sbjct: 659 YSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKV-PLVPDGIT 717

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           FL  L A S    +D G      + K+F   P              +  M+  + + G  
Sbjct: 718 FLVVLYACSHSGMVDHGINFFNRMSKDFGVDP----------GPEHYACMVDLWGRAGRL 767

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI 452
            E + L+ EM  +      V   ALLSA     N ++G+     LL      +G  + L 
Sbjct: 768 GEAMKLINEMPMEP---TPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824

Query: 453 DMYAKSGLIKTARQI 467
           ++YA +   K   +I
Sbjct: 825 NIYANARRWKDVARI 839



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 147/361 (40%), Gaps = 14/361 (3%)

Query: 404 KQGFMIDSVTVTALLSAASN--LRNQDVGKQTHAYLLRHGIHFEGM----ESYLIDMYAK 457
           K   +    T T LLS A+      ++     HA LL      +G+     + LI  Y  
Sbjct: 144 KSKLLQSQFTNTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGLLFHLATNLIGTYIA 203

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           S     A  + E+          WN +I      G   + F  +RQM     TP+  T  
Sbjct: 204 SNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFP 263

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            V  AC  + ++ LG  LH    R     NVFV  +++ MY K G + +A N+F  +  +
Sbjct: 264 FVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHR 323

Query: 578 ---NSVTYTTMILGYGQHGMSERALSLFRSMKGCGI-EPDAITFVAVLSACSYAGLVDEG 633
              + V++ +++  Y     +  AL+LF  M    +  PD I+ V +L AC+       G
Sbjct: 324 GIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRG 383

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            Q+     +   +         V DM  + GK+ EA +  + +  +  V   W +++   
Sbjct: 384 RQVHGFSIRSGLVDDVFVGN-AVVDMYAKCGKMEEANKVFQRMKFKDVV--SWNAMVTGY 440

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
              G  E A  + +++ E +    +  +  +++  YA+ G       V ++M + G R  
Sbjct: 441 SQAGRLEHALSLFERMTEENIELDVVTWTAVITG-YAQRGQGCEALDVFRQMCDCGSRPN 499

Query: 754 V 754
           V
Sbjct: 500 V 500


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/727 (31%), Positives = 383/727 (52%), Gaps = 52/727 (7%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           ++ +  Y+ M K+  +   D YT+ S+LKAC+      +G  +H   +    +   ++ +
Sbjct: 43  HQVLATYASMLKT--HVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIAS 100

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           SL+N Y+                   +   D+  KVFD M  RNVV W TI+  Y +T R
Sbjct: 101 SLINFYA------------------KFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGR 142

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
             EA   F  M R GI+PS+++ +++   +S L   +    ++G  +  G  +++D+ ++
Sbjct: 143 VPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ---CLHGCAILYG--FMSDINLS 197

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + +Y + G  +++RK+FD    R+   WN++I  Y Q  +  E + L ++ + L   
Sbjct: 198 NSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVL-LLLKTMRLQGF 256

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
                TF S LS  +   EL LG+ LH  I++    L   V  ++I              
Sbjct: 257 EAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFR 316

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 ++DVV W  MIS  VQNG  D+ L +  +M K G    + T+ ++++A + L +
Sbjct: 317 MFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGS 376

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            ++G     Y+LR  +  +   ++ L+ MYAK G +  +  +F+  +   RD  +WNAM+
Sbjct: 377 YNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNR--RDLVSWNAMV 434

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
            GY QNG + EA   F +M   N TP+ +TI S+L  C   G + LGK +H F IR  L 
Sbjct: 435 TGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLR 494

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             + V TSL+DMY K G ++ A   F ++P  + V+++ +I+GYG HG  E AL  +   
Sbjct: 495 PCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKF 554

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
              G++P+ + F++VLS+CS+ GLV++GL I++ M +++ I P  EH+ CV D+L R G+
Sbjct: 555 LESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGR 614

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           V EAY   K+   +  VL++ G +L +CR +G++EL + +A  +L +   ++  G  V L
Sbjct: 615 VEEAYNVYKKKFPD-PVLDVLGIILDACRANGNNELGDTIANDILMLRPMDA--GNFVQL 671

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           ++ YA    WE V +    MR  GL+K  G S+ID+ G +  F +    HPQ  +I   L
Sbjct: 672 AHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFIDIHGTITTFFTDHNSHPQFQEIVCTL 731

Query: 786 ERLAMEM 792
           + L  EM
Sbjct: 732 KILRKEM 738



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 265/548 (48%), Gaps = 60/548 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD +     V W TII  +       EA  L+ +M++     S  + T  S
Sbjct: 110 GFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPS--SVTVLS 167

Query: 113 VLKACAETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +L   +E  ++   + +H C  +  F +    + NS+LN+Y  C               +
Sbjct: 168 LLFGVSELAHV---QCLHGCAILYGFMSDIN-LSNSMLNVYGKC-------------GNI 210

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           +YS+     K+FD M  R++V+WN+++S Y +     E +   + M   G      +F +
Sbjct: 211 EYSR-----KLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGS 265

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V    +S G+ K    ++G +++ G  +  D  V +S I +Y + G  D A ++F+   +
Sbjct: 266 VLSVAASRGELKLGRCLHGQILRAG--FYLDAHVETSLIVVYLKGGKIDIAFRMFERSSD 323

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++  +W  MI G VQN    +A+ +F Q+L+   +     T  S ++A +QL   +LG  
Sbjct: 324 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFG-VKPSTATMASVITACAQLGSYNLGTS 382

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +  YI++  + L V   N+++                     RD+VSWN M++ + QNG 
Sbjct: 383 ILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGY 442

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESY 450
             E L L  EM+      DS+T+ +LL   ++     +GK  H++++R+G+     +++ 
Sbjct: 443 VCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTS 502

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY K G + TA++ F +  S   D  +W+A+I GY  +G  E A   + + LE  + 
Sbjct: 503 LVDMYCKCGDLDTAQRCFNQMPS--HDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMK 560

Query: 511 PNVVTIASVLPACNPMGNIELGKQLH-----GFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           PN V   SVL +C+  G +E G  ++      F I   L+ +  V    +D+ S++G + 
Sbjct: 561 PNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACV----VDLLSRAGRVE 616

Query: 566 YAANVFAK 573
            A NV+ K
Sbjct: 617 EAYNVYKK 624



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 76/144 (52%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NA I  ++  G   +    +  ML+ +V  +  T  S+L AC+ +    LG  LH   + 
Sbjct: 30  NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             L  + ++ +SLI+ Y+K G  + A  VF  +PE+N V +TT+I  Y + G    A SL
Sbjct: 90  SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149

Query: 602 FRSMKGCGIEPDAITFVAVLSACS 625
           F  M+  GI+P ++T +++L   S
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVS 173


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/796 (30%), Positives = 406/796 (51%), Gaps = 64/796 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           +IH L     +L++  +     ++     G P  +R  FD++       WN +I  +  N
Sbjct: 105 KIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRN 164

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
            L +E + ++ +M  S  +   DN+T+  V+KACA   ++ IG AVH   ++       F
Sbjct: 165 ELYHEVLEMFIKMI-SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLF 223

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           V N+L++ Y T     DA                   K+FD M  RN+V+WN+++  +  
Sbjct: 224 VGNALVSFYGTHGFVSDA------------------LKLFDIMPERNLVSWNSMIRVFSD 265

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
                               P   + V V P  +   +      V+G  VKL  +   +L
Sbjct: 266 NGD------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLD--KEL 311

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            V ++ + MY++ GC   ++ IF     +N   WNTM+GG+          +L  Q+L  
Sbjct: 312 VVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAG 371

Query: 324 DEIV-FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
            E V  D+VT L+A+        L   ++LH Y +K       ++ NA +          
Sbjct: 372 SEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLS 431

Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      + + SWN +I  + Q+      L    +M+  G + D+ TV +LLSA S
Sbjct: 432 YAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESYL--IDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            L++  +GK+ H +++R+ +  + +  YL  + +Y   G + T + +F+  +  D    +
Sbjct: 492 KLKSLRLGKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGELCTVQVLFDAME--DNSLVS 548

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN +I G+ QNG  E A   FRQM+ + + P  +++ +V  AC+ + ++ LG++ H +++
Sbjct: 549 WNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYAL 608

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           ++LL+ N F+  S+IDMY+K+G I  ++ VF  + EK++ ++  MI+GYG HG ++ A+ 
Sbjct: 609 KHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIK 668

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M+  G  PD +TF+ VL+AC+++GL+ EGL+  D M+  + ++P+ +HY CV DML
Sbjct: 669 LFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDML 728

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G++  A     E+ EE +V  IW SLL  CR+H + E+ E VA KL  ++     P 
Sbjct: 729 GRAGQLDNALRVAAEMSEEPDV-GIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEK--PE 785

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            +VLLSN+YA  G W++V +VR+ M+E  LRK+ GCSWI++ G V  F   ++      +
Sbjct: 786 NYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEE 845

Query: 781 IYEMLERLAMEMRNAG 796
           I  +   L M++   G
Sbjct: 846 IKSLWSILEMKIWKMG 861


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/756 (29%), Positives = 386/756 (51%), Gaps = 49/756 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +   +     V W  +I G V      ++I L+ +M+        + +T ++ LKAC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP--NEFTLATGLKAC 223

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    L +GK +H    +       FV ++L+++Y+ C                   + +
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC------------------GEIE 265

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  K+F  M  +N V WN +++ Y +       ++ F  M+ + ++ +  +   V    +
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +  + K   V++ L++K G  Y  + F+    + MY++ G    A  +F    + +  VW
Sbjct: 326 NSKNLKQGQVIHSLIIKCG--YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + +I    Q     E+I+LF  ++ L + + +  T  S LSA +    L  GQ +HA + 
Sbjct: 384 SALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW 442

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V V NA++                    +RD++SWN  +S     G+ D  L 
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT 502

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
           + Y M ++GF+ +  T  ++L + S L +   G+Q HA+++++ +       + LIDMYA
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYA 562

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   ++ A   F  N    RD  TW  +I  Y Q    E+A   FRQM +  V PN  T+
Sbjct: 563 KCMYLEDADVAF--NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A  L  C+ + ++E G+QLH    +     ++FVG++L+DMY+K G +  A  +F  +  
Sbjct: 621 AGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIR 680

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++++ + T+I GY Q+G   +AL+ FR M   GI PD +TF  +LSACS+ GLV+EG + 
Sbjct: 681 RDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEH 740

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M +++ I P+ +H  C+ D+LGRVGK  E  +F++++    N L IW ++LG+ ++H
Sbjct: 741 FNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL-IWETVLGASKMH 799

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            +  L E  A KL E+         ++LLSNI+A EG W++V +VR  M  +G++KE GC
Sbjct: 800 NNLVLGEKAANKLFELQPEEESS--YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGC 857

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           SW++  G V+ F S D  HPQ  +I+  L+ L  E+
Sbjct: 858 SWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDREL 893



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 295/625 (47%), Gaps = 51/625 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           YSS+L+ CA  R+L + KA+H   ++   NP   ++ SL+N+Y+ C  S  A +V  K  
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAK-- 172

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                           M  R+VV+W  ++   V      +++  F+ M   GI P+  + 
Sbjct: 173 ----------------MPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTL 216

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
                A S          ++    KLG   + DLFV S+ + +YA+ G  + A K+F   
Sbjct: 217 ATGLKACSLCMALDLGKQMHAQAFKLG--LLLDLFVGSALVDLYAKCGEIELASKMFIGM 274

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   WN ++ GY Q       ++LF  ++ELD +  ++ T  + L   +  + L  G
Sbjct: 275 PEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELD-VKCNEFTLTTVLKGCANSKNLKQG 333

Query: 350 QQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           Q +H+ IIK       F+   ++              V   + + D+V W+ +I+   Q 
Sbjct: 334 QVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQ 393

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G  +E + L + M+    + +  T+ +LLSAA+N  N   G+  HA + ++G   +  + 
Sbjct: 394 GQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVS 453

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+ MY K+G +    +++E     DRD  +WNA ++G    G+ +     F  MLE  
Sbjct: 454 NALVTMYMKNGCVHDGTKLYES--MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             PN+ T  S+L +C+ + ++  G+Q+H   I+  LD N FV T+LIDMY+K   +  A 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
             F ++  ++  T+T +I  Y Q    E+AL+ FR M+  G++P+  T    LS CS   
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLA 631

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            ++ G Q+  ++   +K    ++ +   A  DM  + G + EA    + L     +   W
Sbjct: 632 SLEGGQQLHSMV---FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTI--AW 686

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLE 711
            +++     +G    A    + +L+
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLD 711



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 17/206 (8%)

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           +S+L  C    ++ + K +HG  ++ +++ +  +  SL+++Y+K     YA  V AK+P+
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ V++T +I G    G +  ++ LF+ M+  GI P+  T    L ACS    +D G Q 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234

Query: 637 FDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             +  Q +K+    + +   A  D+  + G++  A +    + E+ +V   W  L     
Sbjct: 235 --MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV--TWNVL----- 285

Query: 695 LHGHSELAEVVAK-----KLLEMDTR 715
           L+G+++  +V         ++E+D +
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVK 311


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/719 (33%), Positives = 387/719 (53%), Gaps = 57/719 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            N ++ ++L   A+ ++L+ G+ +H H I+  + +   ++ N+L+  Y+ C     A++V
Sbjct: 6   QNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLV 65

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV----KTERYVEAVRQFRMMLRM 220
                             F+ ++ +NVV++N ++        K   +V  +  FR M+  
Sbjct: 66  ------------------FENLKHKNVVSYNCLIHGLSHNGSKGSNFV--LELFRRMIAN 105

Query: 221 GIRPSTISFVNVFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            I P   +F  VF A + +LG    A  V+ L +K  S  ++D+FV SS +  Y ++GC 
Sbjct: 106 NILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTAS--IDDVFVGSSLVNFYCKVGCV 163

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             ARK+FD   ERN   W TMI GY       EA+ +F  ++ L E   ++  F S LSA
Sbjct: 164 FEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVF-GLMRLVEGNLNEFVFTSVLSA 222

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSW 379
           +   + +D G+Q+H  ++KN V   V VLNA++                    +++ ++W
Sbjct: 223 LVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITW 282

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           + +I+ + Q G   + L L  +M   GF+    T+  +L A S++   + GKQTH YLL+
Sbjct: 283 SALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLK 342

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G   +    + L+DMYAK G    AR+ F+     + D   W ++IAGY QNG  EEA 
Sbjct: 343 SGYETQIYTATALVDMYAKFGFTGDARKGFD--FLLEPDLVLWTSIIAGYVQNGKNEEAL 400

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             + +M    + PN +T+ASVL AC+ +  +E GKQ+H  +I+Y L   + + ++L  MY
Sbjct: 401 SMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMY 460

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           +K G +     +F ++ +++ V++  MI G  Q+G    AL LF  M+  G +PD ITFV
Sbjct: 461 AKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFV 520

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE-LG 677
            VLSACS+ G+V  G   F++M  E+ + P  EHY C+ D+L R GK+ EA EF++  + 
Sbjct: 521 TVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAII 580

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
           + G  L  W  LL +CR H + EL     +KL+E+ +R S    +VLLS+IY   G   +
Sbjct: 581 DHGMCL--WRILLPACRNHCNYELGAYAGEKLMELGSRESSA--YVLLSSIYTAMGRLAD 636

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V +VR+ M+ RG+RKE GCSWI++  +V+ F   DQ HPQ  +I   + RL   M++ G
Sbjct: 637 VVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDG 695



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 218/467 (46%), Gaps = 46/467 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H L      +    + S L    C+ G    AR+LFD +     V W T+I G+    
Sbjct: 133 QVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQ 192

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           +  EA+ ++  M+      + + + ++SVL A      +  GK VHC  ++        V
Sbjct: 193 MAKEALGVFGLMRLVE--GNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSV 250

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MY+ C +             ++YS       +F+    +N + W+ +++ Y + 
Sbjct: 251 LNALVTMYAKCGN-------------LNYS-----LMLFEMCSDKNAITWSALITGYSQA 292

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               +A++ F  M   G  PS  + V V  A S +   +     +G L+K G  Y   ++
Sbjct: 293 GDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG--YETQIY 350

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
            A++ + MYA+ G    ARK FD  LE +  +W ++I GYVQN    EA+ ++ + +++ 
Sbjct: 351 TATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGR-MQMR 409

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV--------ALP------------ 364
           +I+ +++T  S L A S L  L+ G+Q+HA  IK  +        AL             
Sbjct: 410 KILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEG 469

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
           V++   +++RD+VSWN MIS   QNG   E L L  EM+ +G   D +T   +LSA S++
Sbjct: 470 VLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHM 529

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
                G      +         +E Y  ++D+ +++G +  A++  E
Sbjct: 530 GIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIE 576


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 248/779 (31%), Positives = 393/779 (50%), Gaps = 84/779 (10%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           P +A +LF  +       W   I+G  C      +A+L + +M+++  +   DN+   +V
Sbjct: 132 PEVAVRLFHRLRVRNVFSW-AAIVGLQCRMGFSEDALLGFIEMQENGVFP--DNFVLPNV 188

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LKAC   + + +GK VH + ++       FV +SL++MY  C    DA            
Sbjct: 189 LKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR----------- 237

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVFD+M  +NVV WN+++  YV+     EA+  F  M   GI P+ ++  +  
Sbjct: 238 -------KVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 290

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A ++L         + + + L S  ++++ + SS I  Y+++G  + A  +F   LE++
Sbjct: 291 SASANLDALIEGKQGHAIAI-LNSLDLDNI-LGSSIINFYSKVGLIEDAELVFSRMLEKD 348

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN +I  YVQ++   +A+ +   ++  + + FD VT  S LSA +    + LG++ H
Sbjct: 349 VVTWNLLISSYVQHHQVGKALNM-CHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 407

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
            Y I+  +   V+V N++I                    ERD+V WNT+++A+ Q GL  
Sbjct: 408 CYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSG 467

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E L L Y+MQ      DSV    +                               + +I 
Sbjct: 468 EALKLFYQMQ-----FDSVPPNVI-----------------------------SWNSVIL 493

Query: 454 MYAKSGLIKTARQIFEKNDS--GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            + ++G +  A+ +F +  S     +  TW  +I+G  Q+G   EA + F++M E  + P
Sbjct: 494 GFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRP 553

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           ++ +I SVL AC  + ++  G+ +HGF  R+    +V V TSL+DMY+K G I+ A  VF
Sbjct: 554 SIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVF 613

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +  K    Y  MI  Y  HG +  AL+LF+ ++  GIEPD+ITF ++LSACS+AGLV+
Sbjct: 614 HMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVN 673

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL +F  M  ++ + P  EHY CV  +L R G + EA   +  +  + +   I GSLL 
Sbjct: 674 EGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDA-HILGSLLT 732

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR H   EL E ++K L +++  NS  G +V LSN YA  G W  V  +R  M+ RGLR
Sbjct: 733 ACREHHEIELGEYLSKHLFKLEPSNS--GNYVALSNAYAAAGRWVEVSNMRDLMKVRGLR 790

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPR 810
           K  GCSWI  GG +N F + D  HP++ +IY ML  L  EMR  G   I ++  +   R
Sbjct: 791 KNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIASNEENLCSR 849



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 235/454 (51%), Gaps = 25/454 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  ++K G  +  + +V +  +  YA+    + A ++F     RN   W  ++G   + 
Sbjct: 101 IHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRM 160

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FV 361
               +A+  F+++ E + +  D+    + L A   LQ + LG+ +H Y++K       FV
Sbjct: 161 GFSEDALLGFIEMQE-NGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFV 219

Query: 362 ALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +  ++              V ++++E++VV+WN+MI  +VQNGL+ E + + Y+M+ +G 
Sbjct: 220 SSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGI 279

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
               VTV + LSA++NL     GKQ HA  + + +  +  + S +I+ Y+K GLI+ A  
Sbjct: 280 EPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAEL 339

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F +    ++D  TWN +I+ Y Q+  + +A      M   N+  + VT++S+L A    
Sbjct: 340 VFSR--MLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVT 397

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
            NI+LGK+ H + IR  L+ +V V  S+IDMY+K   I+ A  VF    E++ V + T++
Sbjct: 398 SNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLL 457

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
             Y Q G+S  AL LF  M+   + P+ I++ +V+      G V+E   +F  MQ     
Sbjct: 458 AAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGF 516

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           QP+   +  +   L + G   EA  F +++ E G
Sbjct: 517 QPNLITWTTLISGLAQSGFGYEAILFFQKMQEAG 550



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 203/421 (48%), Gaps = 41/421 (9%)

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           I    ++ H  E++ L  + +E ++       +   L      + L  GQQ+HA I+KN 
Sbjct: 51  ISSLCKDGHLQESVHLLSE-MEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNG 109

Query: 360 -------FVALPVIVLNAVIE--------------RDVVSWNTMISAFVQNGLDDEGLML 398
                  +V   ++V  A  +              R+V SW  ++    + G  ++ L+ 
Sbjct: 110 DFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLG 169

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMY 455
             EMQ+ G   D+  +  +L A  +L+   +GK  H Y+L+ G  F     + S L+DMY
Sbjct: 170 FIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMG--FGACVFVSSSLVDMY 227

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G+++ AR++F+     +++  TWN+MI GY QNGL +EA   F  M    + P  VT
Sbjct: 228 GKCGVLEDARKVFD--SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 285

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +AS L A   +  +  GKQ H  +I   LD +  +G+S+I+ YSK G+I  A  VF+++ 
Sbjct: 286 VASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 345

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           EK+ VT+  +I  Y QH    +AL++   M+   +  D++T  ++LSA +    +  G +
Sbjct: 346 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE 405

Query: 636 IFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
                   Y I+ + E    VA    DM  +  ++ +A +      E   VL  W +LL 
Sbjct: 406 -----GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL--WNTLLA 458

Query: 692 S 692
           +
Sbjct: 459 A 459


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 240/772 (31%), Positives = 400/772 (51%), Gaps = 55/772 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +FD++       WN +I  +  N L  E +  + +M  ++     D++TY  
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP-DHFTYPC 192

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KACA   ++ IG AVH   ++       FV N+L++ Y T     DA           
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA----------- 241

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTIS 228
                   ++FD M  RN+V+WN+++  +       E+      M+         P   +
Sbjct: 242 -------LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V V P  +   +      V+G  VKL  +   +L + ++ + MY++ GC   A+ IF  
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLD--KELVLNNALMDMYSKCGCITNAQMIFKM 352

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQELD 347
              +N   WNTM+GG+          ++  Q+L   E V  D+VT L+A+        L 
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 412

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
             ++LH Y +K       +V NA +                     + V SWN +I    
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           Q+      L    +M+  G + DS TV +LLSA S L++  +GK+ H +++R+ +  + +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD-L 531

Query: 448 ESYL--IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
             YL  + +Y   G + T + +F+  +  D+   +WN +I GY QNG  + A   FRQM+
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAME--DKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
            + +    +++  V  AC+ + ++ LG++ H +++++LL+ + F+  SLIDMY+K+G I 
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            ++ VF  + EK++ ++  MI+GYG HG+++ A+ LF  M+  G  PD +TF+ VL+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV-KELGEEGNVLE 684
           ++GL+ EGL+  D M+  + ++P+ +HY CV DMLGR G++ +A   V +E+ EE +V  
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV-G 768

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW SLL SCR+H + E+ E VA KL E++     P  +VLLSN+YA  G WE+V KVR+ 
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK--PENYVLLSNLYAGLGKWEDVRKVRQR 826

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M E  LRK+ GCSWI++   V  F   ++      +I  +   L M++   G
Sbjct: 827 MNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 196/401 (48%), Gaps = 29/401 (7%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           LV   +   ND  + +  I MYA  G  D +R +FD    +N   WN +I  Y +N    
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           E +E F++++   +++ D  T+   + A + + ++ +G  +H  ++K  +   V V NA+
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ----GF 407
           +                    ER++VSWN+MI  F  NG  +E  +L+ EM ++     F
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
           M D  T+  +L   +  R   +GK  H + ++  +  E  + + L+DMY+K G I  A+ 
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 348

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACN 524
           IF+ N+  +++  +WN M+ G++  G     F   RQML    +V  + VTI + +P C 
Sbjct: 349 IFKMNN--NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
               +   K+LH +S++     N  V  + +  Y+K G ++YA  VF  I  K   ++  
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           +I G+ Q      +L     MK  G+ PD+ T  ++LSACS
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/641 (33%), Positives = 349/641 (54%), Gaps = 29/641 (4%)

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +L  ++F  M  +N V+WN +++ Y +     + ++ F  M     + S  +   V    
Sbjct: 2   ELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGC 61

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           ++ G  +   V++ L ++ G E   D F+  S + MY++ G    A K+F      +   
Sbjct: 62  ANTGSLREGKVLHALALRSGCEI--DEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ MI G  Q  H  EA ELF  ++       +  T  S +S  + + +L  GQ +H  I
Sbjct: 120 WSAMITGLDQQGHGQEAAELF-HLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCI 178

Query: 357 IK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
            K      N V+ P+I              V  A+   D+VSWN ++S F  +     G 
Sbjct: 179 CKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGP 238

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
            + Y+M  +GF  +  T  ++L + S+L + + GKQ HA+++++    +  + + L+DMY
Sbjct: 239 RIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMY 298

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK+  ++ A   F++    +RD  +W  +I+GY Q    E+A   FRQM    + PN  T
Sbjct: 299 AKARCLEDAGVAFDR--LVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +AS L  C+ M  +E G+QLH  +++     ++FVG++L+D+Y K G + +A  +F  + 
Sbjct: 357 LASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLI 416

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ V++ T+I GY QHG  E+AL  FR M   GI PD  TF+ VLSACS+ GLV+EG +
Sbjct: 417 SRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK 476

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            FD M + Y I PS EHY C+ D+LGR GK  E   F++E+      L IW ++LG+C+L
Sbjct: 477 RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL-IWETVLGACKL 535

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG+ +  E  AKKL EM+    M   ++LLSNI+A +G W++V  +R  M  RG++KE G
Sbjct: 536 HGNVDFGEKAAKKLFEMEPM--MDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPG 593

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSW++V G V+ F S+D  HP+  +IY  L++L   + + G
Sbjct: 594 CSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIG 634



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/550 (28%), Positives = 268/550 (48%), Gaps = 52/550 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA +LF  +     V WN ++ G+       + + L+ +MK+    T    +T S+VLK 
Sbjct: 3   LAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECE--TKFSKFTLSTVLKG 60

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA T +LR GK +H   +R       F+  SL++MYS C +  DA               
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA--------------- 105

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVF  +R  +VVAW+ +++   +     EA   F +M R G RP+  +  ++    
Sbjct: 106 ---LKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTA 162

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +++GD +    ++G + K G E  +D  V++  I MY +  C +   K+F+     +   
Sbjct: 163 TNMGDLRYGQSIHGCICKYGFE--SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVS 220

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN ++ G+  +        +F Q+L L+    +  TF+S L + S L + + G+Q+HA+I
Sbjct: 221 WNALLSGFYDSQTCGRGPRIFYQML-LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHI 279

Query: 357 IKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           IKN      FV   +              +  + ++ RD+ SW  +IS + Q    ++ +
Sbjct: 280 IKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAV 339

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM--ESYLIDM 454
               +MQ++G   +  T+ + LS  S++   + G+Q HA  ++ G HF  +   S L+D+
Sbjct: 340 KYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG-HFGDIFVGSALVDL 398

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y K G ++ A  IF+   S  RD  +WN +I+GY+Q+G  E+A  AFR ML   + P+  
Sbjct: 399 YGKCGCMEHAEAIFKGLIS--RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEA 456

Query: 515 TIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T   VL AC+ MG +E GK+     S  Y ++ ++     ++D+  ++G  N    +F  
Sbjct: 457 TFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFN-EVKIF-- 513

Query: 574 IPEKNSVTYT 583
           I E N   Y+
Sbjct: 514 IEEMNLTPYS 523


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/756 (29%), Positives = 386/756 (51%), Gaps = 49/756 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +   +     V W  +I G V      ++I L+ +M+        + +T ++ LKAC
Sbjct: 166 ARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMP--NEFTLATGLKAC 223

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    L +GK +H    +       FV ++L+++Y+ C                   + +
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC------------------GEIE 265

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  K+F  M  +N V WN +++ Y +       ++ F  M+ + ++ +  +   V    +
Sbjct: 266 LASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCA 325

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +  + K   V++ L++K G  Y  + F+    + MY++ G    A  +F    + +  VW
Sbjct: 326 NSKNLKQGQVIHSLIIKCG--YEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVW 383

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + +I    Q     E+I+LF  ++ L + + +  T  S LSA +    L  GQ +HA + 
Sbjct: 384 SALITCLDQQGQSEESIKLF-HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW 442

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V V NA++                    +RD++SWN  +S     G+ D  L 
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT 502

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
           + Y M ++GF+ +  T  ++L + S L +   G+Q HA+++++ +       + LIDMYA
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYA 562

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   ++ A   F  N    RD  TW  +I  Y Q    E+A   FRQM +  V PN  T+
Sbjct: 563 KCMYLEDADVAF--NRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A  L  C+ + ++E G+QLH    +     ++FVG++L+DMY+K G +  A  +F  +  
Sbjct: 621 AGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIR 680

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++++ + T+I GY Q+G   +AL+ FR M   GI PD +TF  +LSACS+ GLV+EG + 
Sbjct: 681 RDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEH 740

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M +++ I P+ +H  C+ D+LGRVGK  E  +F++++    N L IW ++LG+ ++H
Sbjct: 741 FNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNAL-IWETVLGASKMH 799

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            +  L E  A KL E+         ++LLSNI+A EG W++V +VR  M  +G++KE GC
Sbjct: 800 NNLVLGEKAANKLFELQPEEESS--YILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGC 857

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           SW++  G V+ F S D  HPQ  +I+  L+ L  E+
Sbjct: 858 SWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDREL 893



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 167/624 (26%), Positives = 294/624 (47%), Gaps = 54/624 (8%)

Query: 81  VCNNLPYEAILLYSQMKKSSPYTSCDNYT-----YSSVLKACAETRNLRIGKAVHCHFIR 135
           V +N PY     + + + +     C +       YSS+L+ CA  R+L + KA+H   ++
Sbjct: 81  VVHNFPYRFNFEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVK 140

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
              NP   ++ SL+N+Y+ C  S  A +V  K                  M  R+VV+W 
Sbjct: 141 DVINPDSHLWVSLVNVYAKCRYSAYARLVLAK------------------MPDRDVVSWT 182

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
            ++   V      +++  F+ M   GI P+  +      A S          ++    KL
Sbjct: 183 ALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKL 242

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G   + DLFV S+ + +YA+ G  + A K+F    E+N   WN ++ GY Q       ++
Sbjct: 243 G--LLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--- 366
           LF  ++ELD +  ++ T  + L   +  + L  GQ +H+ IIK       F+   ++   
Sbjct: 301 LFCSMMELD-VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMY 359

Query: 367 -----------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                      V   + + D+V W+ +I+   Q G  +E + L + M+    + +  T+ 
Sbjct: 360 SKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTIC 419

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           +LLSAA+N  N   G+  HA + ++G   +  + + L+ MY K+G +    +++E     
Sbjct: 420 SLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES--MV 477

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           DRD  +WNA ++G    G+ +     F  MLE    PN+ T  S+L +C+ + ++  G+Q
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H   I+  LD N FV T+LIDMY+K   +  A   F ++  ++  T+T +I  Y Q   
Sbjct: 538 VHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQ 597

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
            E+AL+ FR M+  G++P+  T    LS CS    ++ G Q+  ++   +K    ++ + 
Sbjct: 598 GEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMV---FKSGHVSDMFV 654

Query: 655 --CVADMLGRVGKVVEAYEFVKEL 676
              + DM  + G + EA    + L
Sbjct: 655 GSALVDMYAKCGCMEEAEALFEAL 678



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 103/206 (50%), Gaps = 17/206 (8%)

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           +S+L  C    ++ + K +HG  ++ +++ +  +  SL+++Y+K     YA  V AK+P+
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ V++T +I G    G +  ++ LF+ M+  GI P+  T    L ACS    +D G Q 
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234

Query: 637 FDLMQQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             +  Q +K+    + +    + D+  + G++  A +    + E+ +V   W  L     
Sbjct: 235 --MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDV--TWNVL----- 285

Query: 695 LHGHSELAEVVAK-----KLLEMDTR 715
           L+G+++  +V         ++E+D +
Sbjct: 286 LNGYAQRGDVTGVLKLFCSMMELDVK 311


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/637 (34%), Positives = 359/637 (56%), Gaps = 32/637 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLG 240
           +F +++R +V  +N ++  +   E    ++  F  + +   ++P++ ++     A S   
Sbjct: 74  IFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFR 133

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D ++  V++G  +  G +  ++L + S+ + MY +    + ARK+FD   E++T +WNTM
Sbjct: 134 DDRAGCVIHGQAIVDGCD--SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA------ 354
           I GY +N   VE+I++F  ++       D  T L  L AV++LQEL LG Q+H+      
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251

Query: 355 -----YIIKNFVAL----PVIVLNAVIER-----DVVSWNTMISAFVQNGLDDEGLMLVY 400
                Y++  F++L      I + + + R     D+V++N MI  +  NG  +  L L  
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFK 311

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
           E+   G  + S T+ +L+  + +L    +    H Y L+   +    + + L  +Y+K  
Sbjct: 312 ELMLSGAKLKSSTLVSLVPVSGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLN 368

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I++AR++F+  +S ++   +WNAMI+GYTQNGL E+A   FR+M     +PN VTI  +
Sbjct: 369 EIESARKLFD--ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCI 426

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G + LGK +H        + +++V T+LI MY+K G I  A  +F  +P+KN 
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNE 486

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           VT+ TMI GYG HG  + AL++F  M   GI P  +TF+ VL ACS+AGLV EG +IF+ 
Sbjct: 487 VTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNS 546

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M   Y  +PS +HY CV D+LGR G +  A +F++ +  +     +W +LLG+CR+H  +
Sbjct: 547 MIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGP-SVWETLLGACRIHKDT 605

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            LA  V++KL E+D  N   GYHVLLSNI++ + N+     VR+  ++R L K  G + I
Sbjct: 606 NLARTVSEKLFELDPDNV--GYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++G   + F S DQ HPQ   I+E LE+L  +MR AG
Sbjct: 664 EIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAG 700



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 163/609 (26%), Positives = 290/609 (47%), Gaps = 61/609 (10%)

Query: 44  SRLSKICQE----GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           S L+K+ Q     G  + AR +F S+ RP   ++N ++ GF  N  P+ ++ +++ ++KS
Sbjct: 53  SLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKS 112

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
           +     ++ TY+  + A +  R+ R G  +H   I    +    + ++++ MY       
Sbjct: 113 TDLKP-NSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMY------- 164

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
                  K+  V+ ++     KVFD M  ++ + WNT++S Y K E YVE+++ FR ++ 
Sbjct: 165 ------FKFWRVEDAR-----KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213

Query: 220 MG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
               R  T + +++ PA++ L + +    ++ L  K G  Y +D +V +  I +Y++ G 
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHD-YVLTGFISLYSKCGK 271

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              A  +F      +   +N MI GY  N     ++ LF +++ L        T +S + 
Sbjct: 272 IKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGAKLKSSTLVSLVP 330

Query: 339 AVSQLQELDLGQQLHAYIIK-NFV-------ALPVI------------VLNAVIERDVVS 378
               L    L   +H Y +K NF+       AL  +            + +   E+ + S
Sbjct: 331 VSGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN MIS + QNGL ++ + L  EMQ   F  + VT+T +LSA + L    +GK  H   L
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHD--L 445

Query: 439 RHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
                FE    + + LI MYAK G I  AR++F+      +++ TWN MI+GY  +G  +
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPK--KNEVTWNTMISGYGLHGHGQ 503

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSL 554
           EA   F +ML   + P  VT   VL AC+  G ++ G ++    I RY  + +V     +
Sbjct: 504 EALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACV 563

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSERALSLFRSMKGCGIEPD 613
           +D+  ++G +  A      +P +   +    +LG  + H  +  A ++  S K   ++PD
Sbjct: 564 VDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTV--SEKLFELDPD 621

Query: 614 AITFVAVLS 622
            + +  +LS
Sbjct: 622 NVGYHVLLS 630



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 243/511 (47%), Gaps = 47/511 (9%)

Query: 228 SFVNVFP---ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +F+++F    ++S L    +  V++G        + ND+ + +      ++LG   +AR 
Sbjct: 22  NFLDLFKRSTSISHLAQTHAQIVLHG--------FRNDISLLTKLTQRLSDLGAIYYARD 73

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           IF +    +  ++N ++ G+  N  P  ++ +F  + +  ++  +  T+  A+SA S  +
Sbjct: 74  IFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFR 133

Query: 345 ELDLGQQLHAYII-----------KNFVAL---------PVIVLNAVIERDVVSWNTMIS 384
           +   G  +H   I            N V +            V + + E+D + WNTMIS
Sbjct: 134 DDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMIS 193

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
            + +N +  E + +  ++  +    +D+ T+  +L A + L+   +G Q H+   + G +
Sbjct: 194 GYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCY 253

Query: 444 -FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             + + +  I +Y+K G IK A  +F +      D   +NAMI GYT NG  E +   F+
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMASTLFREFRRP--DIVAYNAMIHGYTSNGETELSLSLFK 311

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +++         T+ S++P     G++ L   +HG+S++     +  V T+L  +YSK  
Sbjct: 312 ELMLSGAKLKSSTLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLN 368

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I  A  +F + PEK+  ++  MI GY Q+G++E A+SLFR M+     P+ +T   +LS
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILS 428

Query: 623 ACSYAGLVDEGLQIFDLMQQ---EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           AC+  G +  G  + DL++    E  I  ST     +  M  + G + EA      + ++
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVST----ALIGMYAKCGSIAEARRLFDFMPKK 484

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
             V   W +++    LHGH + A  +  ++L
Sbjct: 485 NEV--TWNTMISGYGLHGHGQEALTIFSEML 513



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 26/213 (12%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+ S+L++I        AR+LFD     +   WN +I G+  N L  +AI L+ +M+ S 
Sbjct: 362 TVYSKLNEI------ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSE 415

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
              S +  T + +L ACA+   L +GK VH          S +V  +L+ MY+ C S  +
Sbjct: 416 --FSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   ++FD M ++N V WNT++S Y       EA+  F  ML  
Sbjct: 474 AR------------------RLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNS 515

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           GI P+ ++F+ V  A S  G  K  D ++  ++
Sbjct: 516 GIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 250/850 (29%), Positives = 425/850 (50%), Gaps = 122/850 (14%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
           M+S + PL LP P    TP     P   S +       T T+ +   ++  E   HL  Q
Sbjct: 1   MSSFTQPLLLPYPSSIHTPNKHHSPPTSSSAITTTTTTTTTVAAE-PRLPSEWVSHLRSQ 59

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
              S T                    ++AI  Y+ M  +      DN+ + +VLKA A  
Sbjct: 60  TQSSSTF-------------------HQAISTYTNMVTAG--VPPDNFAFPAVLKATAGI 98

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           ++L +GK +H H  +        V NSL+NMY  C                     D   
Sbjct: 99  QDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKC------------------GDIDAAR 140

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL- 239
           +VFD +  R+ V+WN++++   + E +  AV  FR+ML   + P++ + V+V  A S+L 
Sbjct: 141 RVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLI 200

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   V+  +++ G       F  ++ + MYA+LG    A+ +FD   +++   WNT
Sbjct: 201 NGLLLGKQVHAFVLRNGDWRT---FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNT 257

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I    QN+   EA+ L++ V+    +  + VT  S L A S L+ L  G+++HA+++ N
Sbjct: 258 IISSLSQNDRFEEAL-LYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMN 316

Query: 360 -------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
                  FV   ++              V + +  R +  WN MI+ +V+N  D E + L
Sbjct: 317 NDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIEL 376

Query: 399 VYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
             EM  + G   +SVT++++L A     +    +  H+ +++ G   +  +++ L+DMY+
Sbjct: 377 FVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYS 436

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM----LEHNVT-- 510
           + G I+ AR IF   +   +D  +WN MI GY   G  ++A      M     EH +   
Sbjct: 437 RMGRIEIARSIFGSMNR--KDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTF 494

Query: 511 ------------PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
                       PN VT+ +VLP C  +  +  GK++H ++++ +L ++V VG++L+DMY
Sbjct: 495 DDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMY 554

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-----IEPD 613
           +K G +N +  VF ++  +N +T+  +I+ YG HG  E AL LFR M   G     I P+
Sbjct: 555 AKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPN 614

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +T++A+ ++ S++G+VDEGL +F  M+ ++ I+P+++HY C+ D+LGR G++ EAY  +
Sbjct: 615 EVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLI 674

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD-------TRNSMPGYHVLLS 726
           K +      ++ W SLLG+C++H + E+ E+ AK L  +D       T+ SM G      
Sbjct: 675 KTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSMLG------ 728

Query: 727 NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
                           ++M+E+G+RKE GCSWI+ G  V++F + D  HPQS +++E LE
Sbjct: 729 ----------------RKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLE 772

Query: 787 RLAMEMRNAG 796
            L++ M+  G
Sbjct: 773 TLSLRMKKEG 782


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/647 (31%), Positives = 373/647 (57%), Gaps = 36/647 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M +R +  WNT++    + + + + +  F  M R   +P   +      A   L + K  
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 246 DVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           ++++G L   V LGS    DL+V SS I+MY + G    A ++F+   + +   W++M+ 
Sbjct: 61  EMIHGFLKKNVTLGS----DLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVS 116

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G+ +N  P +A+E F ++    ++  D VT ++ +SA ++L    LG+ +H ++++   +
Sbjct: 117 GFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFS 176

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + ++N+++                    E+DV+SW+T+I+ +VQNG   E L +  EM
Sbjct: 177 NDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEM 236

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
              G   +  TV  +L A +   + + G++TH   +R G+  E  + + L+DMY K    
Sbjct: 237 IDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 296

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVL 520
           + A  +F +     +D  +W A+I+G+T NG+   +   F  ML E+N  P+ + +  VL
Sbjct: 297 EEAYAVFSRIPK--KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVL 354

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            +C+ +G ++  +  H + I+Y  D N F+G SL+++YS+ G +  A+ VF +I  K++V
Sbjct: 355 GSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTV 414

Query: 581 TYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            +T++I GYG HG   +AL  F  M +   ++P+ +TF+++LSACS+AGL+ EGL+IF+L
Sbjct: 415 VWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFEL 474

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  +Y++ P+ EHY  + D+LGRVG++  A E  K +       +I G+LLG+CR+H + 
Sbjct: 475 MVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRM-PFSPTPQILGTLLGACRIHQNG 533

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           E+AE VAK+L E+++ ++  GY++L+SN+Y  +G WENV+K+R  +++RG++K +  S I
Sbjct: 534 EMAETVAKQLFELESNHA--GYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 591

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           ++   V++F + D  HP+   +Y +L+ L + M+    + I N N++
Sbjct: 592 EIRRKVHKFVADDDLHPEKEPVYGLLKELDLHMKE-NLEGISNKNME 637



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 253/543 (46%), Gaps = 63/543 (11%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           +T+ T   WNT++     +    + +  +SQM +       DN+T    LKAC E R ++
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKP--DNFTLPVALKACGELREVK 58

Query: 125 IGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
            G+ +H    +  +  S  +V +SL+ MY  C    +A                   ++F
Sbjct: 59  YGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEA------------------LRMF 100

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDY 242
           + + + ++V W+++VS + K     +AV  FR M     + P  ++ + +  A + L + 
Sbjct: 101 NELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNS 160

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +    V+G +++ G  + NDL + +S +  YA+   F  A  +F    E++   W+T+I 
Sbjct: 161 RLGRCVHGFVMRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIA 218

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            YVQN    EA+ +F ++++ D    +  T L  L A +   +L+ G++ H   I+  + 
Sbjct: 219 CYVQNGAAAEALRVFNEMID-DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLE 277

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL-----DDEGLM 397
             V V  A+++                    +DVVSW  +IS F  NG+     ++  +M
Sbjct: 278 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIM 337

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
           L+    +     D++ +  +L + S L      +  H+Y++++G     F G  + L+++
Sbjct: 338 LLENNTRP----DAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIG--ASLVEL 391

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNV 513
           Y++ G +  A ++F  N+   +D   W ++I GY  +G   +A   F  M+  + V PN 
Sbjct: 392 YSRCGSLGNASKVF--NEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNE 449

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT  S+L AC+  G I  G ++    +  Y L  N+     L+D+  + G ++ A  +  
Sbjct: 450 VTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITK 509

Query: 573 KIP 575
           ++P
Sbjct: 510 RMP 512



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 206/455 (45%), Gaps = 72/455 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A ++F+ + +P  V W++++ GF  N  PY+A+  + +M  +S  T  D  T  +
Sbjct: 91  GRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTP-DRVTLIT 149

Query: 113 VLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++ AC +  N R+G+ VH   +R  FSN    V NSLLN Y+   +  +A          
Sbjct: 150 LVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLV-NSLLNCYAKSRAFKEA---------- 198

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     +F  M  ++V++W+T+++ YV+     EA+R F  M+  G  P+  + + 
Sbjct: 199 --------VNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLC 250

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--DFARKIFDNC 289
           V  A ++  D +     + L ++ G E   ++ V+++ + MY  + CF  + A  +F   
Sbjct: 251 VLQACAAANDLEQGRKTHELAIRKGLE--TEVKVSTALVDMY--MKCFSPEEAYAVFSRI 306

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +++   W  +I G+  N     +IE F  +L  +    D +  L  L + S+L  L   
Sbjct: 307 PKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQA 366

Query: 350 QQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQN 389
           +  H+Y+IK  F + P I                   V N +  +D V W ++I+ +  +
Sbjct: 367 ECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIH 426

Query: 390 GLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGM 447
           G   + L     M +   +  + VT  ++LSA S           HA L+  G+  FE M
Sbjct: 427 GKGTKALETFNHMVRSSEVKPNEVTFLSILSACS-----------HAGLIHEGLRIFELM 475

Query: 448 ----------ESY--LIDMYAKSGLIKTARQIFEK 470
                     E Y  L+D+  + G + TA +I ++
Sbjct: 476 VNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKR 510


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 252/768 (32%), Positives = 409/768 (53%), Gaps = 76/768 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q  D   + T    N  ++  +  NL  EA+ L+ +  +     + D  T + VLKAC  
Sbjct: 33  QPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG 92

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             + ++G  +H   I         V NSL+NMY  C + L                +D  
Sbjct: 93  --DSKLGCQIHAFAISSGFISHVTVPNSLMNMY--CKAGL----------------FDRA 132

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             VF+ +   ++V+WNT++S + +++            LRM         V     L+  
Sbjct: 133 LVVFENLNNPDIVSWNTVLSGFQRSDD------ALNFALRMNFTGVAFDAVTCTTVLAFC 186

Query: 240 GDYKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            D++    ++G      ++K G +   ++FV ++ I MY+       AR++FD    ++ 
Sbjct: 187 SDHEG--FIFGFQLHSRILKCGLDC--EVFVGNALITMYSRCCRLVEARRVFDEMRNKDL 242

Query: 295 EVWNTMIGGYVQ-NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
             WN M+ GY Q  N  +EAI +F+++L+ + +  D V+F  A+SA    +E +LG+Q+H
Sbjct: 243 VSWNAMLSGYAQEGNSGLEAILVFLEMLK-EGMKLDHVSFTGAISACGHGKEFELGRQIH 301

Query: 354 AYIIKNFVALPVIVLN--------------------AVIERDVVSWNTMISAFVQNGLDD 393
           +  +K      V V N                    ++I+R+VVSW TMIS       ++
Sbjct: 302 SLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISIS-----EE 356

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           +   L  EM++ G   + VT   L+ A +     + G+  H   ++     E  + + LI
Sbjct: 357 DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLI 416

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYAK   +  + ++FE+ +   R+  +WN++I+GY QNGL +EA   F   L  +  PN
Sbjct: 417 TMYAKFESMSDSMKVFEELNY--REIISWNSLISGYAQNGLWQEALQTFLSALMES-RPN 473

Query: 513 VVTIASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             T  SVL +      I +  G++ H   ++  L+ N  V ++L+DMY+K G I  +  V
Sbjct: 474 EFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGV 533

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F++ P KN V +T +I  + +HG  E  ++LF+ M+  G++PD+ITF+AV++AC   G+V
Sbjct: 534 FSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMV 593

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           D G Q+F+ M +++ I+PS EHY  + DMLGR G++ EA EFV ++   G  L +  SLL
Sbjct: 594 DTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI-PGGAGLSVLQSLL 652

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+CR+HG+ ++A+ VA  L+EM+   S  G +VL+SN+YAE+G WE V K+RK MRERG+
Sbjct: 653 GACRIHGNVDMAKRVADDLIEMEPMGS--GSYVLMSNLYAEKGEWEKVAKIRKGMRERGV 710

Query: 751 RKEVGCSWIDVGG-----YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           RKE+G SW+DVG      Y++ F+S D+ HPQS +IY M E L +EM+
Sbjct: 711 RKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMK 758



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/604 (24%), Positives = 290/604 (48%), Gaps = 68/604 (11%)

Query: 26  QIHSLSPPIPKLKTPTI-RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+ +     +   T+  S ++  C+ G    A  +F+++  P  V WNT++ GF  ++
Sbjct: 99  QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSD 158

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+    +M  +    + D  T ++VL  C++      G  +H   ++C  +   FV
Sbjct: 159 ---DALNFALRMNFTG--VAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MYS C   ++A                   +VFD MR +++V+WN ++S Y + 
Sbjct: 214 GNALITMYSRCCRLVEAR------------------RVFDEMRNKDLVSWNAMLSGYAQE 255

Query: 205 -ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
               +EA+  F  ML+ G++   +SF     A     +++    ++ L VK+G  Y   +
Sbjct: 256 GNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIG--YDTHV 313

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            V +  I  Y++    + A+ +F++ ++RN   W TMI    +     +A  LF + +  
Sbjct: 314 KVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNE-MRR 367

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
           D +  +DVTF+  + A++    ++ GQ +H   +K      + V N++I           
Sbjct: 368 DGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSD 427

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLML----VYEMQKQGFMIDSVTVTALLS 419
                     R+++SWN++IS + QNGL  E L      + E +   F   SV  +   +
Sbjct: 428 SMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESRPNEFTFGSVLSSIASA 487

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            A ++R+   G++ H+++L+ G++   +  S L+DMYAK G I  +  +F  +++  +++
Sbjct: 488 EAISMRH---GQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVF--SETPLKNE 542

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
             W A+I+ + ++G  E     F+ M    V P+ +T  +V+ AC   G ++ G QL   
Sbjct: 543 VAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNS 602

Query: 539 SIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG----YGQHG 593
            ++ +L++ +    +S++DM  ++G +  A     +IP    ++    +LG    +G   
Sbjct: 603 MVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVD 662

Query: 594 MSER 597
           M++R
Sbjct: 663 MAKR 666


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/749 (31%), Positives = 388/749 (51%), Gaps = 49/749 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ ++    V W  ++ G+  N L  EA+ LY QM ++    +   Y  SSVL +C
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT--PYVLSSVLSSC 153

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +      G+ +H    +       FV N+++ +Y  C S                  + 
Sbjct: 154 TKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGS------------------FR 195

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M  R+ V +NT++S + +      A+  F  M   G+ P  ++  ++  A +
Sbjct: 196 LAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACA 255

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLGD +    ++  L K G    +D  +  S + +Y + G  + A  IF++    N  +W
Sbjct: 256 SLGDLQKGTQLHSYLFKAG--ISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLW 313

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  + Q N   ++ ELF Q ++   I  +  T+   L   +  +E+DLG+Q+H+  +
Sbjct: 314 NLMLVAFGQINDLAKSFELFCQ-MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K       +V+  +I              VL  + E+DVVSW +MI+ +VQ+    + L 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQK G   D++ + + +S  + +     G Q HA +   G   +  + + L+++YA
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYA 492

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G I+ A   FE+ +   +D  T N +++G+ Q+GL EEA   F +M +  V  NV T 
Sbjct: 493 RCGRIREAFSSFEEMEL--KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S L A   +  I+ GKQ+H   I+        VG +LI +Y K G    A   F+++ E
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE 610

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL LF  MK  GI+P+ +TF+ VL+ACS+ GLV+EGL  
Sbjct: 611 RNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSY 670

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  EY I+P  +HY CV D+ GR G++  A +F++E+    + + +W +LL +C++H
Sbjct: 671 FKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM-VWRTLLSACKVH 729

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E  AK LLE++  +S    +VLLSN YA    W N D+VRK MR+RG+RKE G 
Sbjct: 730 KNIEVGEFAAKHLLELEPHDSAS--YVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGR 787

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SWI+V   V+ F   D+ HP + +IY  L
Sbjct: 788 SWIEVKNVVHAFFVGDRLHPLAEQIYNFL 816



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/468 (30%), Positives = 229/468 (48%), Gaps = 36/468 (7%)

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           I +Y++ G    AR++F+    R+   W  M+ GY QN    EA+ L+ Q +    +V  
Sbjct: 84  IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQ-MHRAGVVPT 142

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------- 372
                S LS+ ++ +    G+ +HA   K+     + V NAVI                 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 373 ---ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               RD V++NT+IS   Q G  +  L +  EMQ  G   D VT+++LL+A ++L +   
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G Q H+YL + GI  +  ME  L+D+Y K G ++TA  IF  N S   +   WN M+  +
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF--NSSDRTNVVLWNLMLVAF 320

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            Q   L ++F  F QM    + PN  T   +L  C     I+LG+Q+H  S++   + ++
Sbjct: 321 GQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM 380

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           +V   LIDMYSK G +  A  V   + EK+ V++T+MI GY QH   + AL+ F+ M+ C
Sbjct: 381 YVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKC 440

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
           GI PD I   + +S C+    + +GLQI   +    Y    S   +  + ++  R G++ 
Sbjct: 441 GIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSI--WNALVNLYARCGRIR 498

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHG--HSELAEVVAKKLLEMD 713
           EA+   +E       +E+   + G+  + G   S L E   K  + MD
Sbjct: 499 EAFSSFEE-------MELKDGITGNGLVSGFAQSGLHEEALKVFMRMD 539



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQ 534
           R  A+    +AG+  +    +    F      +     +  A  L AC   G   ++  +
Sbjct: 4   RGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPE 63

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  ++   L +   VG  LID+YSK+G++  A  VF ++  +++V++  M+ GY Q+G+
Sbjct: 64  IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            E AL L+R M   G+ P      +VLS+C+ A L  +G
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG 162


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/769 (31%), Positives = 399/769 (51%), Gaps = 50/769 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+F  ++    V W  ++ G+    L  EA  LYSQM  ++   +   Y  SSVL AC
Sbjct: 97  ARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPT--PYVLSSVLSAC 154

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            + +    G+ +H    +       FV N+L+ +Y                  + +  + 
Sbjct: 155 TKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY------------------LGFGSFK 196

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M   + V +NT++S + +      A++ F  M   G+RP  ++  ++  A +
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+GD +    ++  L+K G  +  D     S + +Y + G  + A  IF+     N  +W
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSF--DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  Y Q +   ++ E+F Q ++   I  +  T+   L   +   +++LG+Q+H+  I
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQ-MQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           KN      +V+  +I              +L  + +RDVVSW +MI+ +VQ+   +E L 
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQ  G   D++ + +  SA + ++    G Q HA +   G   +  + + L+++YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G  + A  +F + D   +D+ TWN +I+G+ Q+ L E+A + F +M +     NV T 
Sbjct: 494 RCGRSEEAFSLFREIDH--KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTF 551

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S + A   + +I+ GKQ+HG +++        V  +LI +Y K G I  A  +F+++  
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL LF  MK  G++P+ +TF+ VL+ACS+ GLV+EGL  
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSY 671

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M   Y + P  +HY CV D+LGR G++  A  FV E+    N + IW +LL +C++H
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM-IWRTLLSACKVH 730

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E+ AK LLE++  +S    +VLLSN YA  G W N D+VRK M++RG+RKE G 
Sbjct: 731 KNIEIGELAAKHLLELEPHDSAS--YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGR 788

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           SWI+V   V+ F   D+ HP S +IY+ L  L   +   G K  +N N+
Sbjct: 789 SWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQ-ENPNL 836



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 235/492 (47%), Gaps = 34/492 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D  + +  I +YA+ G    AR++F     R+   W  M+ GY Q     EA  L+ Q +
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQ-M 135

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
               ++       S LSA ++ +    G+ +HA + K        V NA+I         
Sbjct: 136 HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSF 195

Query: 373 ---ER--------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
              ER        D V++NT+IS   Q G  +  L +  EMQ  G   D VTV +LL+A 
Sbjct: 196 KLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +++ +   GKQ H+YLL+ G+ F+ + E  L+D+Y K G I+TA  IF   + GDR    
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF---NLGDRTNVV 312

Query: 481 -WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            WN M+  Y Q   L ++F  F QM    + PN  T   +L  C   G IELG+Q+H  S
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLS 372

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+   + +++V   LIDMYSK   ++ A  +   + +++ V++T+MI GY QH   E AL
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVAD 658
           + F+ M+ CG+ PD I   +  SAC+    + +GLQI   +    Y    S   +  + +
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVN 490

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +  R G+  EA+   +E+  +  +   W  L+      G S L E      ++M    + 
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEI--TWNGLISG---FGQSRLYEQALMVFMKMSQAGAK 545

Query: 719 PGYHVLLSNIYA 730
                 +S I A
Sbjct: 546 YNVFTFISAISA 557



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)

Query: 507 HNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           H+       +   L AC   GN   L  ++H  S+   L  +  +G  LID+Y+K+G++ 
Sbjct: 36  HHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVW 95

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF ++  ++ V++  M+ GY Q G+ + A  L+  M    + P      +VLSAC+
Sbjct: 96  QARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT 155

Query: 626 YAGLVDEGLQI 636
              L  +G  I
Sbjct: 156 KGKLFAQGRMI 166


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/716 (33%), Positives = 381/716 (53%), Gaps = 57/716 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  ++KA     ++  G+ +H H ++        V NSLL MY  C    DA        
Sbjct: 112 FPCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDA-------- 163

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTIS 228
                      ++F+ M   ++V+WNT++S + K+  Y  ++  FR M+   GI P+ ++
Sbjct: 164 ----------VQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVA 213

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V+   + SSL        ++G++VK G +   + ++ SS I MY + G    A  IF++
Sbjct: 214 CVSSILSCSSLQSLTHGREIHGVVVKSGLDV--EEYLVSSLIEMYMKCGSIKNAENIFNS 271

Query: 289 CLE-----RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            L+     RN  +WN MI GYV N    +A+ LF++++    I  D  T +S  S  S+ 
Sbjct: 272 ILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWG-IKPDYSTMVSLFSLCSES 330

Query: 344 QELDLGQQLHAYI----IKNFVALPVIVLNAVIE----------------RDVVSWNTMI 383
            ++  G+Q+H  I    +KN + +   +L+  ++                 +++ W+ +I
Sbjct: 331 LDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVI 390

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   Q+G   + L L YE + +  + DS  + A+L A S+L  +  G Q H    + G  
Sbjct: 391 SNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFV 450

Query: 444 ---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              F G  S L+D+YAK   +  ++++F +     +D  +WNA+I+GY Q+   +EA  A
Sbjct: 451 SDVFVG--SALVDLYAKCRDMGYSKKVFLR--LSQKDLVSWNALISGYAQDECADEALKA 506

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           FR M    + PN VTIA +L  C  +  + L K++HG+ IR  L   V V  SLI  Y+K
Sbjct: 507 FRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAK 566

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G IN +   F K+PE+N V++ ++ILG G H  ++  + LF  M   GI+PD +TF A+
Sbjct: 567 CGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAI 626

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACS+AG VDEG + F  M +++ ++P  E Y C+ D+LGR G + +AY+ +  +    
Sbjct: 627 LSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTP 686

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +   IWGSLLGSC+ HG   LAE+VA  + ++    S  GY VLL+N+Y   G      K
Sbjct: 687 DD-RIWGSLLGSCKNHGDEILAEIVANHIFKLVP--SSVGYRVLLANLYENLGKGREGSK 743

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           VR E+++ GL+K+ GCSWI+V    + F + D+ H QS +IY  +E L  E++ AG
Sbjct: 744 VRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAG 799



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 256/544 (47%), Gaps = 49/544 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F+ +     V WNT+I GF  +     +++ +  M              SS+L +C
Sbjct: 163 AVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSIL-SC 221

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  ++L  G+ +H   ++   +   ++ +SL+ MY  C S  +AE +    ++ D     
Sbjct: 222 SSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSV--- 278

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                     RRN V WN ++S YV    + +A+  F  M+  GI+P   + V++F   S
Sbjct: 279 ----------RRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCS 328

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              D      ++GL+ K G +  N++ V ++ + MY + G      KIF      N  +W
Sbjct: 329 ESLDIAFGKQIHGLIFKFGLK--NNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMW 386

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + +I    Q+  P +A+ELF +  ++++ + D    ++ L A S L     G Q+H    
Sbjct: 387 SAVISNCAQSGCPTKALELFYE-FKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLAT 445

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V V +A++                    ++D+VSWN +IS + Q+   DE L 
Sbjct: 446 KMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALK 505

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYA 456
              +MQ +    ++VT+  +LS  ++L    + K+ H YL+R G+    + S  LI  YA
Sbjct: 506 AFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYA 565

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I ++   FEK    +R+  +WN++I G   +   +E  V F +M+   + P+ VT 
Sbjct: 566 KCGDINSSLYTFEKMP--ERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTF 623

Query: 517 ASVLPACNPMGNIELG-----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            ++L AC+  G ++ G       +  F+++  L+Q     T ++D+  ++G +N A ++ 
Sbjct: 624 TAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQY----TCMVDLLGRAGHLNQAYDLI 679

Query: 572 AKIP 575
             +P
Sbjct: 680 MAMP 683



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 182/368 (49%), Gaps = 27/368 (7%)

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL-SAVSQLQELDLGQQLHAYI 356
           N +I  Y ++    +AI +++++L+ D +  ++  +   L  A   L ++  G+Q+H ++
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLD-DGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHV 135

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K  V   V V+N+++                    E D+VSWNTMIS F ++      L
Sbjct: 136 LKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSL 195

Query: 397 MLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           M    M  + G   + V   + + + S+L++   G++ H  +++ G+  E  + S LI+M
Sbjct: 196 MFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEM 255

Query: 455 YAKSGLIKTARQIFEK---NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           Y K G IK A  IF      DS  R+   WN MI+GY  NG   +A + F +M+   + P
Sbjct: 256 YMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKP 315

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T+ S+   C+   +I  GKQ+HG   ++ L  N+ V T+L+DMY K G +     +F
Sbjct: 316 DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIF 375

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            +    N + ++ +I    Q G   +AL LF   K      D+   VAVL ACS   L  
Sbjct: 376 RRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKP 435

Query: 632 EGLQIFDL 639
           EG+QI  L
Sbjct: 436 EGMQIHGL 443



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 215/466 (46%), Gaps = 59/466 (12%)

Query: 58  ARQLFDSI-----TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           A  +F+SI      R   VIWN +I G+V N    +A+LL+ +M         D  T  S
Sbjct: 265 AENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWG--IKPDYSTMVS 322

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM-VGLKYVEV 171
           +   C+E+ ++  GK +H    +     +  V  +LL+MY  C      +M  GL     
Sbjct: 323 LFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKC-----GDMGTGL----- 372

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRMMLRMGIRPSTIS 228
                    K+F   +  N++ W+ ++S   ++    + +E   +F+M    G+  S I 
Sbjct: 373 ---------KIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKM--EDGLADSGI- 420

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V V  A SSL        ++GL  K+G  +V+D+FV S+ + +YA+     +++K+F  
Sbjct: 421 LVAVLRACSSLTLKPEGMQIHGLATKMG--FVSDVFVGSALVDLYAKCRDMGYSKKVFLR 478

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +++   WN +I GY Q+    EA++ F + ++L+EI  + VT    LS  + L  + L
Sbjct: 479 LSQKDLVSWNALISGYAQDECADEALKAF-RDMQLEEIRPNTVTIACILSVCAHLSVMTL 537

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
            +++H Y+I+  +   V+V N++I                    ER+ VSWN++I     
Sbjct: 538 CKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGM 597

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +   DE ++L  +M   G   D VT TA+LSA S+    D G +    ++        +E
Sbjct: 598 HSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLE 657

Query: 449 SY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
            Y  ++D+  ++G +  A  +         D+  W +++     +G
Sbjct: 658 QYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDR-IWGSLLGSCKNHG 702


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/743 (30%), Positives = 388/743 (52%), Gaps = 75/743 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           D +      K+ A  R+L   +++H   +R      P+  V N+LL  Y+ C   L A +
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARC-GDLTAAL 114

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             +FD M  R+ V +N++++      R++ A+   R ML  G  
Sbjct: 115 A-----------------LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 157

Query: 224 PSTISFVNVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            ++ + V+V  A S L  D +     +   +K G    ++ F  ++ + MYA LG  D A
Sbjct: 158 LTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 217

Query: 283 RKIFDNCLERNTE-----VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
           + +F +    +        WNTM+   VQ+    EAIE+   ++    +  D VTF SAL
Sbjct: 218 QTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARG-VRPDGVTFASAL 276

Query: 338 SAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAVIER--------DVVS---- 378
            A SQL+ L LG+++HAY++K+       FVA  ++ + A  ER        D+V     
Sbjct: 277 PACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGER 336

Query: 379 ----WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT- 433
               WN MI  + Q GLD++ L L   M+ +  ++ S T  A +  +        GK+  
Sbjct: 337 QLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAV 396

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y+++ G+     +++ L+D+YA+ G +  AR IF   +   RD  +WN +I G    G
Sbjct: 397 HGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEP--RDVVSWNTLITGCVVQG 454

Query: 493 LLEEAFVAFRQML------------------EHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            + +AF   R+M                   E  V PN +T+ ++LP C  +     GK+
Sbjct: 455 HIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKE 514

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +HG+++R+ LD +V VG++L+DMY+K G +  +  VF ++P +N +T+  +I+ YG HG+
Sbjct: 515 IHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGL 574

Query: 595 SERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            + A++LF  M      +P+ +TF+A L+ACS++G+VD GL++F  M++ + ++P+ + +
Sbjct: 575 GDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLH 634

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C  D+LGR G++ EAY  +  +      +  W S LG+CRLH +  L E+ A++L E++
Sbjct: 635 ACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELE 694

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
              +   ++VLL NIY+  G WE   +VR  MR+RG+ KE GCSWI++ G ++RF + + 
Sbjct: 695 PDEA--SHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGES 752

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP+S  ++  ++ L   MR+ G
Sbjct: 753 AHPESTLVHAHMDALWERMRDQG 775



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 40/265 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC------------ 105
           AR +F +I     V WNT+I G V      +A  L  +M++   +T              
Sbjct: 428 ARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEE 487

Query: 106 ----DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               +N T  ++L  CA       GK +H + +R   +    V ++L++MY+ C      
Sbjct: 488 PVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKC------ 541

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRM 220
                           L   VFD + RRNV+ WN ++  Y       EA+  F RM+   
Sbjct: 542 ------------GCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASD 589

Query: 221 GIRPSTISFVNVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             +P+ ++F+    A S  G   +  ++   +    G E   DL   + A+ +    G  
Sbjct: 590 EAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLH--ACAVDILGRAGRL 647

Query: 280 DFARKIFDNCL--ERNTEVWNTMIG 302
           D A +I  +    E+    W++ +G
Sbjct: 648 DEAYRIISSMEPGEQQVSAWSSFLG 672


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/718 (31%), Positives = 380/718 (52%), Gaps = 46/718 (6%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TY +++ AC   R+L+ GK +H H ++    P   + N +LNMY  C S  DA       
Sbjct: 82  TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR------ 135

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       K FDTM+ R+VV+W  ++S Y +  +  +A+  +  MLR G  P  ++
Sbjct: 136 ------------KAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLT 183

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F ++  A    GD      ++G ++K G  Y + L   ++ I MY + G    A  +F  
Sbjct: 184 FGSIIKACCIAGDIDLGGQLHGHVIKSG--YDHHLIAQNALISMYTKFGQIAHASDVFTM 241

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              ++   W +MI G+ Q  + +EA+ LF  +        ++  F S  SA   L + + 
Sbjct: 242 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEF 301

Query: 349 GQQLHAYIIK------------------NFVALPVI--VLNAVIERDVVSWNTMISAFVQ 388
           G+Q+     K                   F  LP        +   D+VSWN +I+A   
Sbjct: 302 GRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN 361

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGM 447
           + ++ E +    +M   G M D +T   LL A  +    + G Q H+Y+++ G+     +
Sbjct: 362 SDVN-EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAV 420

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ MY K   +  A  +F K+ S + +  +WNA+++  +Q+    EAF  F+ ML  
Sbjct: 421 CNSLLTMYTKCSNLHDAFNVF-KDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFS 479

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
              P+ +TI ++L  C  + ++E+G Q+H FS++  L  +V V   LIDMY+K G++ +A
Sbjct: 480 ENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHA 539

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF      + V+++++I+GY Q G+ + AL+LFR M+  G++P+ +T++ VLSACS+ 
Sbjct: 540 RYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHI 599

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+EG  +++ M+ E  I P+ EH  C+ D+L R G + EA  F+K+ G + ++  +W 
Sbjct: 600 GLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDI-TMWK 658

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL SC+ HG+ ++AE  A+ +L++D  NS     VLLSNI+A  GNW+ V ++R  M++
Sbjct: 659 TLLASCKTHGNVDIAERAAENILKLDPSNSAA--LVLLSNIHASAGNWKEVARLRNLMKQ 716

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
            G++K  G SWI+V   ++ F S+D  HPQ   IY MLE L ++M + G    Q  ++
Sbjct: 717 MGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDPCQRLDI 774



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 276/569 (48%), Gaps = 54/569 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+ FD++   + V W  +I G+  N    +AI++Y QM +S  +   D  T+ S++KAC
Sbjct: 134 ARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFP--DQLTFGSIIKAC 191

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               ++ +G  +H H I+   +      N+L++MY+             K+ ++ ++   
Sbjct: 192 CIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT-------------KFGQIAHAS-- 236

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
               VF  +  +++++W ++++ + +    +EA+  FR M R G+ +P+   F +VF A 
Sbjct: 237 ---DVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSAC 293

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            SL   +    + G+  K G     ++F   S   MYA+ G    A++ F      +   
Sbjct: 294 RSLLKPEFGRQIQGMCAKFG--LGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVS 351

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I   + N+   EAI  F Q++ +  ++ DD+TFL+ L A      L+ G Q+H+YI
Sbjct: 352 WNAIIAA-LANSDVNEAIYFFCQMIHMG-LMPDDITFLNLLCACGSPMTLNQGMQIHSYI 409

Query: 357 IKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEG 395
           IK  +     V N+++                       ++VSWN ++SA  Q+    E 
Sbjct: 410 IKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEA 469

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
             L   M       D++T+T +L   + L + +VG Q H + ++ G+  +  + + LIDM
Sbjct: 470 FRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDM 529

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK GL+K AR +F+     + D  +W+++I GY Q GL +EA   FR M    V PN V
Sbjct: 530 YAKCGLLKHARYVFDSTQ--NPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEV 587

Query: 515 TIASVLPACNPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T   VL AC+ +G +E G  L+    I   +       + ++D+ +++G +  A N   K
Sbjct: 588 TYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKK 647

Query: 574 IPEKNSVT-YTTMILGYGQHG---MSERA 598
                 +T + T++     HG   ++ERA
Sbjct: 648 TGFDPDITMWKTLLASCKTHGNVDIAERA 676



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 206/425 (48%), Gaps = 35/425 (8%)

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+ I    +  H  EA++ F   L+   I  +  T+++ + A + ++ L  G+++H +I+
Sbjct: 48  NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+     +++ N ++                     R VVSW  MIS + QNG +++ ++
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYA 456
           +  +M + G+  D +T  +++ A     + D+G Q H ++++ G  H    ++ LI MY 
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV-TPNVVT 515
           K G I  A  +F    +  +D  +W +MI G+TQ G   EA   FR M    V  PN   
Sbjct: 228 KFGQIAHASDVFTMIST--KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFI 285

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             SV  AC  +   E G+Q+ G   ++ L +NVF G SL DMY+K G +  A   F +I 
Sbjct: 286 FGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE 345

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
             + V++  +I       ++E A+  F  M   G+ PD ITF+ +L AC     +++G+Q
Sbjct: 346 SPDLVSWNAIIAALANSDVNE-AIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQ 404

Query: 636 IFDLMQQEYKIQPSTEHYCCVAD----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           I       Y I+   +    V +    M  +   + +A+   K++ E GN++  W ++L 
Sbjct: 405 I-----HSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVS-WNAILS 458

Query: 692 SCRLH 696
           +C  H
Sbjct: 459 ACSQH 463


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/712 (32%), Positives = 375/712 (52%), Gaps = 47/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ TY  + + C E R+  +GK V  H I+     + +  N+L+ +YS C +  +A    
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEAR--- 112

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          ++FD++  + VV WN +++ Y +     EA   FR M+  G+ PS
Sbjct: 113 ---------------QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+F++V  A SS         V+  +V  G  +V+D  + ++ + MY + G  D AR++
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAG--FVSDFRIGTALVSMYVKGGSMDDARQV 215

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    R+   +N M+GGY ++    +A ELF ++ ++  +  + ++FLS L      + 
Sbjct: 216 FDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVG-LKPNKISFLSILDGCWTPEA 274

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L  G+ +HA  +   +   + V  ++I                     RDVVSW  MI  
Sbjct: 275 LAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEG 334

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + +NG  ++   L   MQ++G   D +T   +++A +   N +  ++ H+ +   G   +
Sbjct: 335 YAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394

Query: 446 GMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            + S  L+ MYAK G IK ARQ+F+      RD  +W+AMI  Y +NG   EAF  F  M
Sbjct: 395 LLVSTALVHMYAKCGAIKDARQVFDAMPR--RDVVSWSAMIGAYVENGYGTEAFETFHLM 452

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              N+ P+ VT  ++L AC  +G +++G +++  +I+  L  +V +G +LI M +K G +
Sbjct: 453 KRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSV 512

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F  +  ++ +T+  MI GY  HG +  AL LF  M      P+++TFV VLSAC
Sbjct: 513 ERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSAC 572

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S AG VDEG + F  + +   I P+ + Y C+ D+LGR G++ EA   +K +  +     
Sbjct: 573 SRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTS-S 631

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW SLL +CR+HG+ ++AE  A++ L +D  +     +V LS++YA  G WENV KVRK 
Sbjct: 632 IWSSLLVACRIHGNLDVAERAAERCLMIDPYDG--AVYVQLSHMYAAAGMWENVAKVRKV 689

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M  RG+RKE GC+WI+V G V+ F  +D+ HP   +IY  L RL   ++  G
Sbjct: 690 MESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREG 741



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 170/584 (29%), Positives = 276/584 (47%), Gaps = 61/584 (10%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           +L  IC  G    ARQ+FDS+   T V WN +I G+       EA  L+ QM       S
Sbjct: 100 KLYSIC--GNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
               T+ SVL AC+    L  GK VH   +         +  +L++MY    S  DA   
Sbjct: 158 I--ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDAR-- 213

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           +VFD +  R+V  +N +V  Y K+  + +A   F  M ++G++P
Sbjct: 214 ----------------QVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKP 257

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + ISF+++     +         V+   +  G   V+D+ VA+S I MY   G  + AR+
Sbjct: 258 NKISFLSILDGCWTPEALAWGKAVHAQCMNAG--LVDDIRVATSLIRMYTTCGSIEGARR 315

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FDN   R+   W  MI GY +N +  +A  LF  + E + I  D +T++  ++A +   
Sbjct: 316 VFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE-EGIQPDRITYMHIMNACAISA 374

Query: 345 ELDLGQQLHAYI-IKNF-----VALPVI--------------VLNAVIERDVVSWNTMIS 384
            L+  +++H+ + I  F     V+  ++              V +A+  RDVVSW+ MI 
Sbjct: 375 NLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIG 434

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IH 443
           A+V+NG   E     + M++     D VT   LL+A  +L   DVG + +   ++   + 
Sbjct: 435 AYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVS 494

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + LI M AK G ++ AR IF+      RD  TWNAMI GY+ +G   EA   F +
Sbjct: 495 HVPLGNALIIMNAKHGSVERARYIFDTMVR--RDVITWNAMIGGYSLHGNAREALYLFDR 552

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT-----SLIDMY 558
           ML+    PN VT   VL AC+  G ++ G++       YLL+    V T      ++D+ 
Sbjct: 553 MLKERFRPNSVTFVGVLSACSRAGFVDEGRRF----FTYLLEGRGIVPTVKLYGCMVDLL 608

Query: 559 SKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHG---MSERA 598
            ++G ++ A  +   +P K  S  ++++++    HG   ++ERA
Sbjct: 609 GRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERA 652



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 159/307 (51%), Gaps = 21/307 (6%)

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
           ++  + + G  IDS T   L    + LR+  +GKQ   ++++ G      E + LI +Y+
Sbjct: 44  VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
             G +  ARQIF+  +  ++   TWNA+IAGY Q G ++EAF  FRQM++  + P+++T 
Sbjct: 104 ICGNVTEARQIFDSVE--NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITF 161

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            SVL AC+    +  GK++H   +      +  +GT+L+ MY K G ++ A  VF  +  
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHI 221

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA------------- 623
           ++  T+  M+ GY + G  E+A  LF  M+  G++P+ I+F+++L               
Sbjct: 222 RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281

Query: 624 ---CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
              C  AGLVD+ +++   + + Y    S E    V D + +V  VV     ++   E G
Sbjct: 282 HAQCMNAGLVDD-IRVATSLIRMYTTCGSIEGARRVFDNM-KVRDVVSWTVMIEGYAENG 339

Query: 681 NVLEIWG 687
           N+ + +G
Sbjct: 340 NIEDAFG 346


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 252/782 (32%), Positives = 392/782 (50%), Gaps = 90/782 (11%)

Query: 55   PHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
            P +A +LF  +       W  I+ G  C      +A+L + +M+++  +   DN+   +V
Sbjct: 1227 PEVAVRLFHRLRVRNVFSWAAIV-GLQCRMGFSEDALLGFIEMQENGVFP--DNFVLPNV 1283

Query: 114  LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
            LKAC   + + +GK VH + ++       FV +SL++MY  C    DA            
Sbjct: 1284 LKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDAR----------- 1332

Query: 174  SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI---SFV 230
                   KVFD+M  +NVV WN+++  YV+     EA+  F  M   GI P+ +   SF+
Sbjct: 1333 -------KVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFL 1385

Query: 231  NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +    L +L + K    +  +L  L      D  + SS I  Y+++G  + A  +F   L
Sbjct: 1386 SASANLDALIEGKQGHAI-AILNSLDL----DNILGSSIINFYSKVGLIEDAELVFSRML 1440

Query: 291  ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            E++   WN +I  YVQ++   +A+ +   ++  + + FD VT  S LSA +    + LG+
Sbjct: 1441 EKDVVTWNLLISSYVQHHQVGKALNM-CHLMRSENLRFDSVTLSSILSASAVTSNIKLGK 1499

Query: 351  QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            + H Y I+  +   V+V N++I                    ERD+V WNT+++A+ Q G
Sbjct: 1500 EGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVG 1559

Query: 391  LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
            L  E L L Y+MQ      DSV    +   +                             
Sbjct: 1560 LSGEALKLFYQMQ-----FDSVPPNVISWNS----------------------------- 1585

Query: 451  LIDMYAKSGLIKTARQIFEKNDS--GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            +I  + ++G +  A+ +F +  S     +  TW  +I+G  Q+G   EA + F++M E  
Sbjct: 1586 VILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAG 1645

Query: 509  VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            + P++ +I SVL AC  + ++  G+ +HGF  R+    +V V TSL+DMY+K G I+ A 
Sbjct: 1646 IRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAK 1705

Query: 569  NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
             VF  +  K    Y  MI  Y  HG +  AL+LF+ ++  GIEPD+ITF ++LSACS+AG
Sbjct: 1706 KVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAG 1765

Query: 629  LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            LV+EGL +F  M  ++ + P  EHY CV  +L R G + EA   +  +  + +   I GS
Sbjct: 1766 LVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDA-HILGS 1824

Query: 689  LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
            LL +CR H   EL E ++K L +++  NS  G +V LSN YA  G W  V  +R  M+ R
Sbjct: 1825 LLTACREHHEIELGEYLSKHLFKLEPSNS--GNYVALSNAYAAAGRWVEVSNMRDLMKVR 1882

Query: 749  GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDAT 808
            GLRK  GCSWI  GG +N F + D  HP++ +IY ML  L  EMR  G   I ++  +  
Sbjct: 1883 GLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVPIASNEENLC 1942

Query: 809  PR 810
             R
Sbjct: 1943 SR 1944



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 235/454 (51%), Gaps = 25/454 (5%)

Query: 248  VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            ++  ++K G  +  + +V +  +  YA+    + A ++F     RN   W  ++G   + 
Sbjct: 1196 IHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRM 1255

Query: 308  NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FV 361
                +A+  F+++ E + +  D+    + L A   LQ + LG+ +H Y++K       FV
Sbjct: 1256 GFSEDALLGFIEMQE-NGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFV 1314

Query: 362  ALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            +  ++              V ++++E++VV+WN+MI  +VQNGL+ E + + Y+M+ +G 
Sbjct: 1315 SSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGI 1374

Query: 408  MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
                VTV + LSA++NL     GKQ HA  + + +  +  + S +I+ Y+K GLI+ A  
Sbjct: 1375 EPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAEL 1434

Query: 467  IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
            +F +    ++D  TWN +I+ Y Q+  + +A      M   N+  + VT++S+L A    
Sbjct: 1435 VFSR--MLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVT 1492

Query: 527  GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             NI+LGK+ H + IR  L+ +V V  S+IDMY+K   I+ A  VF    E++ V + T++
Sbjct: 1493 SNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLL 1552

Query: 587  LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
              Y Q G+S  AL LF  M+   + P+ I++ +V+      G V+E   +F  MQ     
Sbjct: 1553 AAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQS-LGF 1611

Query: 647  QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            QP+   +  +   L + G   EA  F +++ E G
Sbjct: 1612 QPNLITWTTLISGLAQSGFGYEAILFFQKMQEAG 1645



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 202/419 (48%), Gaps = 37/419 (8%)

Query: 301  IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
            I    ++ H  E++ L  + +E ++       +   L      + L  GQQ+HA I+KN 
Sbjct: 1146 ISSLCKDGHLQESVHLLSE-MEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNG 1204

Query: 360  -------FVALPVIVLNAVIE--------------RDVVSWNTMISAFVQNGLDDEGLML 398
                   +V   ++V  A  +              R+V SW  ++    + G  ++ L+ 
Sbjct: 1205 DFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLG 1264

Query: 399  VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAK 457
              EMQ+ G   D+  +  +L A  +L+   +GK  H Y+L+ G      + S L+DMY K
Sbjct: 1265 FIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGK 1324

Query: 458  SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
             G+++ AR++F+     +++  TWN+MI GY QNGL +EA   F  M    + P  VT+A
Sbjct: 1325 CGVLEDARKVFD--SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 1382

Query: 518  SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            S L A   +  +  GKQ H  +I   LD +  +G+S+I+ YSK G+I  A  VF+++ EK
Sbjct: 1383 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEK 1442

Query: 578  NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
            + VT+  +I  Y QH    +AL++   M+   +  D++T  ++LSA +    +  G +  
Sbjct: 1443 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE-- 1500

Query: 638  DLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
                  Y I+ + E    VA    DM  +  ++ +A +      E   VL  W +LL +
Sbjct: 1501 ---GHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL--WNTLLAA 1554


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/802 (29%), Positives = 411/802 (51%), Gaps = 66/802 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
            +H+L PP  K K   + +  +        H           P + I+   ++G    NL
Sbjct: 42  NLHTLHPPFRKAKHICVSNSATTTTSLSSNH----------NPNSHIYQLCLLG----NL 87

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
                 L S  +   P    ++  Y ++++ C   R  + G  V+ +     S+ S  + 
Sbjct: 88  DRAMSYLDSMHELRIPV---EDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           N+LL+M+    + +DA  V                  F  M +RN+ +WN +V  Y K  
Sbjct: 145 NALLSMFVRFGNLVDAWYV------------------FGRMEKRNLFSWNVLVGGYAKAG 186

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            + EA+  +  ML +G++P   +F  V      + +      ++  +++ G E  +D+ V
Sbjct: 187 LFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFE--SDVDV 244

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            ++ I MY + G  + AR +FD    R+   WN MI GY +N   +E + LF  +++   
Sbjct: 245 VNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKY-P 303

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------ 373
           +  D +T  S ++A   L +  LG+Q+H Y+++        + N++I             
Sbjct: 304 VDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAE 363

Query: 374 --------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                   RD+VSW  MIS +    +  + L     M+ +G M D +T+  +LSA S L 
Sbjct: 364 TVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLC 423

Query: 426 NQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           N D+G   H    + G + +  + + LIDMYAK   I  A +IF  + + +++  +W ++
Sbjct: 424 NLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIF--HSTLEKNIVSWTSI 481

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           I G   N    EA   FR+M+   + PN VT+  VL AC  +G +  GK++H  ++R  +
Sbjct: 482 ILGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGV 540

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
             + F+  +++DMY + G + YA   F  + +    ++  ++ GY + G    A  LF+ 
Sbjct: 541 SFDGFMPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQR 599

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M    + P+ +TF+++L ACS +G+V EGL+ F+ M+ +Y I P+ +HY CV D+LGR G
Sbjct: 600 MVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSG 659

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           K+ EAYEF++++  + +   +WG+LL SCR+H H EL E+ A+ + + DT +   GY++L
Sbjct: 660 KLEEAYEFIQKMPMKPDP-AVWGALLNSCRIHHHVELGELAAENIFQDDTTSV--GYYIL 716

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           LSN+YA+ G W+ V +VRK MR+ GL  + GCSW++V G V+ F S D  HPQ  +I  +
Sbjct: 717 LSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINAL 776

Query: 785 LERLAMEMRNAGNKTIQNSNVD 806
           LER   +M+ AG +  ++S++D
Sbjct: 777 LERFYKKMKEAGVEGPESSHMD 798


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 241/774 (31%), Positives = 400/774 (51%), Gaps = 58/774 (7%)

Query: 46   LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYT 103
            +S +   GR   AR L   I  P+TV WN +I  +  + L  E   LY  MK+    P  
Sbjct: 268  ISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTR 327

Query: 104  SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY--STCLSSLDA 161
            S    T++S+L A A       G+ +H   ++   + + FV +SL+N+Y    C+S  DA
Sbjct: 328  S----TFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCIS--DA 381

Query: 162  EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            +                  KVFD    +N+V WN ++  +V+ +   E ++ F+ M R  
Sbjct: 382  K------------------KVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRAD 423

Query: 222  IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
            +     +FV+V  A  +L        V+ + +K  +    DLFVA++ + MY++LG  D 
Sbjct: 424  LEADDFTFVSVLGACINLDSLDIGRQVHCITIK--NSMDADLFVANAMLDMYSKLGAIDV 481

Query: 282  ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
            A+ +F     +++  WN +I G   N    EA+ + ++ ++   I  D+V+F +A++A S
Sbjct: 482  AKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYM-LKRMKCYGIAPDEVSFATAINACS 540

Query: 342  QLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNT 381
             ++  + G+Q+H   IK      + V   +I              VL  V    +V  N 
Sbjct: 541  NIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINA 600

Query: 382  MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            +I+  VQN  +DE + L  ++ K GF   + T  ++LS  +   +  +GKQ H+Y L+  
Sbjct: 601  LITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSA 660

Query: 442  I--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +      +   L+ +Y K  L++ A ++  +     ++   W A I+GY QNG  +++ V
Sbjct: 661  LLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPD-HKNLVEWTATISGYAQNGYSDQSLV 719

Query: 500  AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
             F +M  H+V  +  T ASVL AC+ +  +  GK++HG  I+          ++L+DMYS
Sbjct: 720  MFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYS 779

Query: 560  KSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            K G +  +  +F ++  K N + + +MI+G+ ++G +  AL LF+ M+   ++PD +T +
Sbjct: 780  KCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLL 839

Query: 619  AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
             VL ACS+AGL+ EG  +FD M Q Y I P  +HY C+ D+LGR G + EA E + +L  
Sbjct: 840  GVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPF 899

Query: 679  EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
              + + IW + L +C++H   E  +V AKKL+EM+ + S    +V LS+++A  GNW   
Sbjct: 900  RADGV-IWATFLAACQMHKDEERGKVAAKKLVEMEPQRS--STYVFLSSLHAAAGNWVEA 956

Query: 739  DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
               R+ MRE+G+ K  GCSWI VG   N F  +D  HP +  IY+ML+ L   M
Sbjct: 957  KVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMM 1010



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 190/682 (27%), Positives = 340/682 (49%), Gaps = 95/682 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK--SSPYTSCDNYTYSSVLK 115
           AR++FD I  P T+ W ++I G+       +A+ L+S+M+K  S+P    D  TY +++ 
Sbjct: 214 ARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAP----DQVTYVTIIS 269

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
             A    L   + +    ++    PS   +N++++ YS   S L++E+ GL         
Sbjct: 270 TLASMGRLSDARTL----LKRIQMPSTVAWNAVISSYSQ--SGLESEVFGL--------- 314

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                                                 ++ M R G+ P+  +F ++  A
Sbjct: 315 --------------------------------------YKDMKRQGLMPTRSTFASMLSA 336

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +S+  +     ++   VK G +   ++FV SS I +Y + GC   A+K+FD   E+N  
Sbjct: 337 AASMTAFDEGQQIHAAAVKHGLD--ANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 394

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +WN M+ G+VQN+   E I++F Q +   ++  DD TF+S L A   L  LD+G+Q+H  
Sbjct: 395 MWNAMLYGFVQNDLQEETIQMF-QYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCI 453

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            IKN +   + V NA+++                    +D VSWN +I     N  ++E 
Sbjct: 454 TIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEA 513

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI---HFEGMESYLI 452
           + ++  M+  G   D V+    ++A SN+R  + GKQ H   +++ +   H  G  S LI
Sbjct: 514 VYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG--SSLI 571

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+Y+K G ++++R++    D+        NA+I G  QN   +EA   F+Q+L+    P+
Sbjct: 572 DLYSKFGDVESSRKVLAHVDAS--SMVPINALITGLVQNNREDEAIELFQQVLKDGFKPS 629

Query: 513 VVTIASVLPAC-NPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             T AS+L  C  P+ ++ +GKQ+H ++++  LL+Q+  +G SL+ +Y K  ++  A  +
Sbjct: 630 NFTFASILSGCTGPVSSV-IGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKL 688

Query: 571 FAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            A++P+ KN V +T  I GY Q+G S+++L +F  M+   +  D  TF +VL ACS    
Sbjct: 689 LAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAA 748

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           + +G +I  L+ +   +   T     + DM  + G V+ ++E  KEL  + N++  W S+
Sbjct: 749 LTDGKEIHGLIIKSGFVSYETA-ASALMDMYSKCGDVISSFEIFKELKNKQNIMP-WNSM 806

Query: 690 LGSCRLHGHSELAEVVAKKLLE 711
           +     +G++  A ++ +K+ E
Sbjct: 807 IVGFAKNGYANEALLLFQKMQE 828



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/632 (24%), Positives = 283/632 (44%), Gaps = 80/632 (12%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D +  + VL AC+    L  G+ VHC  ++     S F    L++MY+ C+   DA    
Sbjct: 159 DQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDAR--- 215

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VFD +   + + W ++++ Y +  RY +A+  F  M +MG  P 
Sbjct: 216 ---------------RVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPD 260

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +++V +   L                                     A +G    AR +
Sbjct: 261 QVTYVTIISTL-------------------------------------ASMGRLSDARTL 283

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
                  +T  WN +I  Y Q+    E   L+ + ++   ++    TF S LSA + +  
Sbjct: 284 LKRIQMPSTVAWNAVISSYSQSGLESEVFGLY-KDMKRQGLMPTRSTFASMLSAAASMTA 342

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
            D GQQ+HA  +K+ +   V V +++I                    E+++V WN M+  
Sbjct: 343 FDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYG 402

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           FVQN L +E + +   M++     D  T  ++L A  NL + D+G+Q H   +++ +  +
Sbjct: 403 FVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDAD 462

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + ++DMY+K G I  A+ +F       +D  +WNA+I G   N   EEA    ++M
Sbjct: 463 LFVANAMLDMYSKLGAIDVAKALFSLIPG--KDSVSWNALIVGLAHNEEEEEAVYMLKRM 520

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             + + P+ V+ A+ + AC+ +   E GKQ+H  SI+Y +  N  VG+SLID+YSK G +
Sbjct: 521 KCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDV 580

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             +  V A +   + V    +I G  Q+   + A+ LF+ +   G +P   TF ++LS C
Sbjct: 581 ESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGC 640

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           +       G Q+     +   +   T     +  +  +   + +A + + E+ +  N++E
Sbjct: 641 TGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVE 700

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            W + +     +G+S+ + V+  ++   D R+
Sbjct: 701 -WTATISGYAQNGYSDQSLVMFWRMRSHDVRS 731



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 225/425 (52%), Gaps = 25/425 (5%)

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R+   +G  P       V  A S LG  +    V+  ++K G  + +  F  +  + MYA
Sbjct: 149 RLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSG--FCSSAFCQAGLVDMYA 206

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           +      AR++FD     +T  W +MI GY +     +A+ LF ++ ++     D VT++
Sbjct: 207 KCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAP-DQVTYV 265

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           + +S ++ +  L   + L               L  +     V+WN +IS++ Q+GL+ E
Sbjct: 266 TIISTLASMGRLSDARTL---------------LKRIQMPSTVAWNAVISSYSQSGLESE 310

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYL 451
              L  +M++QG M    T  ++LSAA+++   D G+Q HA  ++HG+    F G  S L
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVG--SSL 368

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I++Y K G I  A+++F+   S +++   WNAM+ G+ QN L EE    F+ M   ++  
Sbjct: 369 INLYVKHGCISDAKKVFDF--STEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEA 426

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T  SVL AC  + ++++G+Q+H  +I+  +D ++FV  +++DMYSK G I+ A  +F
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALF 486

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           + IP K+SV++  +I+G   +   E A+ + + MK  GI PD ++F   ++ACS     +
Sbjct: 487 SLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATE 546

Query: 632 EGLQI 636
            G QI
Sbjct: 547 TGKQI 551



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           HA +LR G+   G +   L+D+Y +SG +  A +            A  +++++ + ++G
Sbjct: 79  HARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARSG 138

Query: 493 LLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
              +   AF+++      TP+   +A VL AC+ +G +E G+Q+H   ++     + F  
Sbjct: 139 SPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQ 198

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             L+DMY+K   +  A  VF  I   +++ + +MI GY + G  ++AL+LF  M+  G  
Sbjct: 199 AGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSA 258

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +T+V ++S  +  G + +   +   +Q      PST  +  V     + G   E + 
Sbjct: 259 PDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYSQSGLESEVFG 313

Query: 672 FVKELGEEG 680
             K++  +G
Sbjct: 314 LYKDMKRQG 322



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA--KIPEKNSVTYTTMILGYGQH 592
           LH   +R  L     +G +L+D+Y +SG + YA            +    ++++  + + 
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 593 GMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           G     L  F+ ++   G  PD      VLSACS  G +++G Q+
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQV 182


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/744 (30%), Positives = 398/744 (53%), Gaps = 46/744 (6%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N  I       L  EAI  +  ++K + +    + TY+ ++ AC+  R+L  GK +H H 
Sbjct: 31  NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLS-TYAYLISACSYLRSLEHGKKIHDHM 89

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           ++  S+P   + N +LNMY  C S  DA+                  KVFD M  RNVV+
Sbjct: 90  LKSKSHPDLTLQNHILNMYGKCKSLKDAQ------------------KVFDAMPERNVVS 131

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W ++++ Y +  +   A+  +  ML+ G+ P   +F ++  A SSLGD      ++  ++
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K  SE+   +   ++ I MY +      A  +F     R+   W +MI G+ Q  + +EA
Sbjct: 192 K--SEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------- 358
           +  F ++L     + ++  F S  SA S L + + G+QLH   IK               
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCD 309

Query: 359 -----NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                  ++   +V   +   D+V+WN +I+ F   G   E +    +M+ QG + D +T
Sbjct: 310 MYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEIT 369

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKND 472
           V +LL A ++      G Q H Y+ + G+  +  + + L+ MYAK   ++ A   FE+  
Sbjct: 370 VRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMR 429

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             + D  +WNA++    ++   EE F   + M      P+ +T+ +VL A     +IE+G
Sbjct: 430 C-NADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIG 488

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            Q+H ++++  L+ +  V   LID+Y+K G +  A  +F  +   + V+++++ILGY Q 
Sbjct: 489 NQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQF 548

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  E AL LF++M+   ++P+ +TFV VL+ACS+ GLV+EG +++  M++E+ I P+ EH
Sbjct: 549 GYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREH 608

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
             C+ D+L R G + EA  F+ ++  + +++ +W +LL +C+ HG+ ++ +  A+ +L++
Sbjct: 609 CSCMVDLLARAGCLNEAEGFIHQMAFDPDIV-VWKTLLAACKTHGNVDVGKRAAENILKI 667

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS    HVLL NIYA +GNWE+V ++R  M++RG+RK  G SWI+V   ++ F  +D
Sbjct: 668 DPSNSAA--HVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVED 725

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
             HP+ +KIY MLE L ++M +AG
Sbjct: 726 SLHPERNKIYTMLEELLLQMLDAG 749



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 273/565 (48%), Gaps = 58/565 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++FD++     V W ++I G+  N     A+  Y QM +S      D +T+ S++KAC
Sbjct: 117 AQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMP--DQFTFGSIIKAC 174

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   ++ +G+ +H H ++          N+L++MY+     +DA                
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDA---------------- 218

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR-PSTISFVNVFPAL 236
               VF  M  R++++W ++++ + +    +EA+  F+ ML  G+  P+   F +VF A 
Sbjct: 219 --LDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSAC 276

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SSL   +    ++G+ +K G     D+F   S   MYA+ G    AR +F      +   
Sbjct: 277 SSLLQPEYGRQLHGMSIKFG--LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVA 334

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I G+       EAI  F Q +    ++ D++T  S L A +   EL  G Q+H YI
Sbjct: 335 WNAIIAGFAYGGDAKEAIAFFSQ-MRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYI 393

Query: 357 IKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEG 395
            K  + L V V N ++                       D+VSWN +++A +++   +E 
Sbjct: 394 NKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEV 453

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
             L+  M       D +T+T +L A++   + ++G Q H Y L+ G++ +  + + LID+
Sbjct: 454 FRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDL 513

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G +KTA +IF+     + D  +W+++I GY Q G  EEA   F+ M   +V PN V
Sbjct: 514 YAKCGSLKTAHKIFDSMI--NPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHV 571

Query: 515 TIASVLPACNPMGNIELGKQLHG-----FSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           T   VL AC+ +G +E G +L+G     F I    +      + ++D+ +++G +N A  
Sbjct: 572 TFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHC----SCMVDLLARAGCLNEAEG 627

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHG 593
              ++  + + V + T++     HG
Sbjct: 628 FIHQMAFDPDIVVWKTLLAACKTHG 652



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 175/403 (43%), Gaps = 37/403 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F  I RP  V WN II GF       EAI  +SQM+        D  T  S+L AC
Sbjct: 320 ARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIP--DEITVRSLLCAC 377

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G  VH +  +   +    V N+LL MY+ C    DA                
Sbjct: 378 TSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIF-------------- 423

Query: 178 LVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                F+ MR   ++V+WN I++  ++ ++  E  R  ++M     RP  I+  NV  A 
Sbjct: 424 ----FFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGAS 479

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +     +  + V+   +K G     D  V +  I +YA+ G    A KIFD+ +  +   
Sbjct: 480 AETVSIEIGNQVHCYALKTGLNC--DTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVS 537

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+++I GY Q  +  EA++LF  +  LD +  + VTF+  L+A S +  ++ G +L+  +
Sbjct: 538 WSSLILGYAQFGYGEEALKLFKTMRRLD-VKPNHVTFVGVLTACSHVGLVEEGWKLYGTM 596

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            K F   P         R+  S   M+    + G  +E    +++M    F  D V    
Sbjct: 597 EKEFGIAPT--------REHCS--CMVDLLARAGCLNEAEGFIHQM---AFDPDIVVWKT 643

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LL+A     N DVGK+    +L+           L ++YA  G
Sbjct: 644 LLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKG 686


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 255/796 (32%), Positives = 413/796 (51%), Gaps = 80/796 (10%)

Query: 18  TPPPPQLPQIHSLSPPIPKLKTPTIRS-------RLSKICQE--------GRPHLARQLF 62
           T  PP L Q+ +L   + + K     S       R   +C          G P  +  LF
Sbjct: 34  TSNPPNLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLF 93

Query: 63  DSIT--RPTTVIWNTIIIGFVCNNLP--YEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
                   +  +WNT+I     N++   ++    Y+ M ++      D  TY  VLK C+
Sbjct: 94  QHSVAYSRSAFLWNTLIRA---NSIAGVFDGFGTYNTMVRAG--VKPDECTYPFVLKVCS 148

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           +   +R G+ VH    +   +   FV N+LL  Y  C    DA                 
Sbjct: 149 DFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAM---------------- 192

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMGIRPSTISFVNVFPAL 236
             KVFD M  R+ V+WNT++        Y EA+  FR+M+  + GI+P  ++ V+V P  
Sbjct: 193 --KVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVC 250

Query: 237 SSLGDYKSADVV--YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           +   D   A +V  Y L V L   +V    V ++ + +Y + G    ++K+FD   ERN 
Sbjct: 251 AETEDKVMARIVHCYALKVGLLGGHVK---VGNALVDVYGKCGSEKASKKVFDEIDERNV 307

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDE-IVFDDVTFLSALSAVSQLQELDLGQQLH 353
             WN +I  +      ++A+++F   L +DE +  + VT  S L  + +L    LG ++H
Sbjct: 308 ISWNAIITSFSFRGKYMDALDVFR--LMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVH 365

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            + +K  +   V + N++I+                    R++VSWN MI+ F +N L+ 
Sbjct: 366 GFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEY 425

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLI 452
           E + LV +MQ +G   ++VT T +L A + L   +VGK+ HA ++R G   +   S  L 
Sbjct: 426 EAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALT 485

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY+K G +  A+ +F   +   RD+ ++N +I GY++     E+   F +M    + P+
Sbjct: 486 DMYSKCGCLNLAQNVF---NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPD 542

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           +V+   V+ AC  +  I  GK++HG  +R L   ++FV  SL+D+Y++ G I+ A  VF 
Sbjct: 543 IVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFY 602

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            I  K+  ++ TMILGYG  G  + A++LF +MK  G+E D+++FVAVLSACS+ GL+++
Sbjct: 603 CIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEK 662

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G + F +M  +  I+P+  HY C+ D+LGR G + EA + ++ L    +   IWG+LLG+
Sbjct: 663 GRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDT-NIWGALLGA 720

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+HG+ EL    A+ L E+  ++   GY++LLSN+YAE   W+  +KVR+ M+ RG +K
Sbjct: 721 CRIHGNIELGLWAAEHLFELKPQHC--GYYILLSNMYAEAERWDEANKVRELMKSRGAKK 778

Query: 753 EVGCSWIDVGGYVNRF 768
             GCSW+ VG  V+ F
Sbjct: 779 NPGCSWVQVGDLVHAF 794


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/800 (30%), Positives = 409/800 (51%), Gaps = 52/800 (6%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRL--SKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P +P+IH+    I  L    I   L      ++G    AR++F+ ++    V W  ++ G
Sbjct: 59  PLVPEIHA-KAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSG 117

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +  N L  EA+ LY +M +S    +   Y  SS+L AC +T   ++G+ +H    +    
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPT--PYVLSSILSACTKTELFQLGRLIHVQVYKQGFF 175

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              FV N+L+++Y  C S                  + L  +VF  M   + V +NT++S
Sbjct: 176 SETFVGNALISLYLRCRS------------------FRLADRVFCDMLYCDSVTFNTLIS 217

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            + +      A+  F  M   G+ P +++  ++  A S++GD +    ++  L+K G   
Sbjct: 218 GHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSL 277

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             D  +  S + +Y + G  + A +IFD+    N  +WN M+  Y Q +   ++ ++F +
Sbjct: 278 --DYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYR 335

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------- 366
           +L    +  +  T+   L   +   E+ LG+Q+H+  IKN      +V+  +I       
Sbjct: 336 MLAAG-VRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYG 394

Query: 367 -------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                  +L+ + E+DVVSW +MI+ +VQ+    E L    EMQ  G   D++ + + +S
Sbjct: 395 WLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAIS 454

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A + ++    G Q HA +   G   +  + + L+ +YA+ G+ K A   FE  +   ++ 
Sbjct: 455 ACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH--KEG 512

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            TWN +I+G+ Q+GL EEA   F +M +     NV T  S + A   + +I+ GKQ+H  
Sbjct: 513 ITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHAR 572

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            I+        +  +LI +Y K G I  A   F ++ ++N V++ T+I    QHG    A
Sbjct: 573 VIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEA 632

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L LF  MK  G++P  +TFV VL+ACS+ GLV+EGL  F  M  E+ I P  +HY CV D
Sbjct: 633 LDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVD 692

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G++  A  FV+E+    + + +W +LL +C++H + E+ E  AK LLE++  +S 
Sbjct: 693 ILGRAGQLDRAKRFVEEMPIPADSM-VWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSA 751

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
              +VLLSN YA  G W + D++RK M++RG+RKE G SWI+V   V+ F   D+ HP +
Sbjct: 752 S--YVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLA 809

Query: 779 HKIYEMLERLAMEMRNAGNK 798
            +IY  L  L   +   G K
Sbjct: 810 DQIYNFLSHLNDRLYKIGYK 829



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 1/159 (0%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQ 534
           R  A++N  +AG+      E+    F       +    V  A  L AC   G    L  +
Sbjct: 4   RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPE 63

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  +I   L     +G  LID+Y+K G +  A  VF ++  +++V++  ++ GY Q+G+
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            E A+ L+R M   G+ P      ++LSAC+   L   G
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG 162


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 250/821 (30%), Positives = 419/821 (51%), Gaps = 67/821 (8%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSL-------SPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
           + L  P   +      L Q+H+        S P+   K     +R+      G  H +R 
Sbjct: 1   MTLYMPLFRSCSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARM------GSLHSSRL 54

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ-MKKSSPYTSCDNYTYSSVLKACAE 119
           +F++   P + ++  +I  ++ ++L  + + LY   ++K S  T    + Y SV+KA + 
Sbjct: 55  VFETHPSPDSFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISV 114

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEMVGLKYVEVDYSKYD 177
              L +G+ VH   ++        +  SLL MY    CLS  DA                
Sbjct: 115 VGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLS--DAR--------------- 157

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD +R R++V+W+++V+ YV+  R  E +   R M+  G+ P +++ ++V  A  
Sbjct: 158 ---KVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACG 214

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G  + A  V+G +++   E   D  + +S I MY +      A+ +F++  + +T  W
Sbjct: 215 KVGCLRLAKSVHGYVIR--KEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACW 272

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            +MI    QN    EAI+ F ++ E  E+  + VT +S L   ++L  L  G+ +H +I+
Sbjct: 273 TSMISSCNQNGCFEEAIDAFKKMQE-SEVEVNAVTMISVLCCCARLGWLKEGKSVHCFIL 331

Query: 358 KN----------------FVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +                 + A   I     +L  +    VVSWNT+IS + + GL++E +
Sbjct: 332 RREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAM 391

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
           +L   M ++G M DS ++ + +SA +   +   G+Q H ++ + G   E +++ L+DMY+
Sbjct: 392 VLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEFVQNSLMDMYS 451

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +  A  IF+K    ++   TWN MI G++QNG+  EA   F +M  + +  N VT 
Sbjct: 452 KCGFVDLAYTIFDK--IWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTF 509

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S + AC+  G +  GK +H   +   + +++++ T+L+DMY+K G +  A  VF  +PE
Sbjct: 510 LSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPE 569

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V+++ MI  YG HG    A +LF  M    I+P+ +TF+ +LSAC +AG V+EG   
Sbjct: 570 KSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFY 629

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M ++Y I P+ EH+  + D+L R G +  AYE +K   +  +   IWG+LL  CR+H
Sbjct: 630 FNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDA-SIWGALLNGCRIH 687

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G  +L   + K+L E+ T ++  GY+ LLSNIYAE GNW    KVR  M   GL+K  G 
Sbjct: 688 GRMDLIHNIHKELREIRTNDT--GYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGY 745

Query: 757 SWIDVGGYVNRFASKDQEHP-QSHKIYEMLERLAMEMRNAG 796
           S I++   + RF + D     Q  +IY  L+      R  G
Sbjct: 746 SSIEIDDKIYRFGAGDTSSAWQMDEIYRFLDNFQSLAREQG 786


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 239/711 (33%), Positives = 370/711 (52%), Gaps = 78/711 (10%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           +S  NY Y++ LK C E RN    K +HC  IR  +NP  F+YN+L+N Y       +A 
Sbjct: 2   SSSSNY-YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNAR 60

Query: 163 MV----------GLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            V              +   YSK   +    +VFD+M   +VV+WN+++S Y       E
Sbjct: 61  NVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISE 120

Query: 210 AVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           +VR + MML+ G +  + I+F  +    S+ G       ++G + K G  Y + LFV S 
Sbjct: 121 SVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFG--YQSYLFVGSP 178

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + MYA+ G  + A +IF+   E+N  V+NTMI G ++    VEA +LF           
Sbjct: 179 LVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLF----------- 227

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
                                                   + + E+D +SW T+I+   Q
Sbjct: 228 ----------------------------------------DNMPEKDSISWTTIITGLTQ 247

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FE 445
           NGL  E +    EM  +GF +D  T  ++L+A       D GKQ HAY++R       F 
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           G  S L+DMY K   +K A  +F K     ++  +W AM+ GY QNG  EEA   F  M 
Sbjct: 308 G--SALLDMYCKCRNVKYAEAVFRKMRH--KNVISWTAMLVGYGQNGYSEEAVRIFCDMQ 363

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
            + + P+  T+ SV+ +C  + ++E G Q HG ++   L   V V  +LI +Y K G + 
Sbjct: 364 RNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLE 423

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           +A  +F ++  ++ V++T ++ GY Q G +   +SLF +M   GI PD +TFV VLSACS
Sbjct: 424 HAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACS 483

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            AGLV++G   F+ M +E++I P  +HY C+ D+L R G++ EA  F+ ++    + +  
Sbjct: 484 RAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIG- 542

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL SCRL+G+ E+ +  A+ L +++ +N  P  ++LLS+IYA +G W++V K+RK M
Sbjct: 543 WATLLSSCRLNGNLEIGKWAAESLHKLEPQN--PASYILLSSIYAAKGKWDDVAKLRKGM 600

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RE G++KE G SWI     V+ F++ D+  P S +IY  LE L ++M   G
Sbjct: 601 REMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEG 651



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 231/534 (43%), Gaps = 73/534 (13%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           IP+    +  + LS   + G     +++FDS+     V WN+++ G+  N L  E++ +Y
Sbjct: 66  IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY 125

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           + M K     + +  T+S++L   +    + +G+ +H    +       FV + L++MY+
Sbjct: 126 NMMLKDGS-VNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYA 184

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYD------LVCK-------VFDTMRRRNVVAWNTIVSW 200
                 DA  +  +  E +   Y+      L C+       +FD M  ++ ++W TI++ 
Sbjct: 185 KTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITG 244

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
             +   + EAV +F+ M   G      +F +V  A            ++  +++  ++Y 
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIR--TDYQ 302

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +++FV S+ + MY +     +A  +F     +N   W  M+ GY QN +  EA+ +F   
Sbjct: 303 DNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCD- 361

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           ++ +EI  DD T  S +S+ + L  L+ G Q H   + + +   V V NA+I        
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGS 421

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        RD VSW  ++S + Q G  +E + L   M   G + D VT   +LSA
Sbjct: 422 LEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481

Query: 421 ASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            S            A L+  G H FE M                   + E   +   D  
Sbjct: 482 CS-----------RAGLVEKGYHYFECM-------------------VKEHRITPIPDHY 511

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
           T   MI   ++ G LEEA     QM     +P+ +  A++L +C   GN+E+GK
Sbjct: 512 T--CMIDLLSRAGRLEEAKNFINQM---PFSPDAIGWATLLSSCRLNGNLEIGK 560



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 175/404 (43%), Gaps = 40/404 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A QLFD++    ++ W TII G   N L  EA+  + +M         D +T+ SVL AC
Sbjct: 223 AEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEG--FCMDQFTFGSVLTAC 280

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H + IR     + FV ++LL+MY  C +        +KY E       
Sbjct: 281 GGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRN--------VKYAEA------ 326

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  MR +NV++W  ++  Y +     EAVR F  M R  I P   +  +V  + +
Sbjct: 327 ----VFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCA 382

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     +G    L S  +  + V+++ I +Y + G  + A ++F     R+   W
Sbjct: 383 NLASLEEGAQFHG--QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSW 440

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E I LF  +L    IV D VTF+  LSA S+   ++ G      ++
Sbjct: 441 TALVSGYAQFGKANETISLFETMLA-HGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K     P+             +  MI    + G  +E    + +M    F  D++    L
Sbjct: 500 KEHRITPI----------PDHYTCMIDLLSRAGRLEEAKNFINQMP---FSPDAIGWATL 546

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
           LS+     N ++GK     L  H +  +   SY++   +YA  G
Sbjct: 547 LSSCRLNGNLEIGKWAAESL--HKLEPQNPASYILLSSIYAAKG 588


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 245/774 (31%), Positives = 395/774 (51%), Gaps = 55/774 (7%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR++FD I  P  V W++++  +  N +P +A+  +  M+  S    C+ +    VL
Sbjct: 53  PGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCS--VRCNEFVLPVVL 110

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K CA       G  +H   +        FV N+L+ MY            G  +V     
Sbjct: 111 K-CAPDAGF--GTQLHALAMATGLGGDIFVANALVAMYG-----------GFGFV----- 151

Query: 175 KYDLVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
             D    VFD     RN V+WN ++S YVK +R   AV+ F  M+  G++P+   F  V 
Sbjct: 152 --DEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVV 209

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +   D ++   V+ ++++ G  Y  D+F A++ + MY++LG    A  +F    E +
Sbjct: 210 NACTGSRDLEAGRKVHAMVIRTG--YDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN  I G V + H   A+EL +Q ++   +V +  T  S L A +     +LG+Q+H
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQ-MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIH 326

Query: 354 AYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
            +++K      N++A  ++              V + + +RD+V WN +IS         
Sbjct: 327 GFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHA 386

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L   M+K+GF ++  T+ A+L + ++L      +Q HA   + G   +  + + LI
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLI 446

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D Y K   +  A ++FEK+  G  D   + +MI   +Q    E+A   F +ML   + P+
Sbjct: 447 DSYWKCDCLNYAYRVFEKH--GSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPD 504

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
              ++S+L AC  +   E GKQ+H   I+     +VF G +L+  Y+K G I  A   F+
Sbjct: 505 PFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFS 564

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            +PEK  V+++ MI G  QHG  +RAL +F  M    I P+ IT  +VL AC++AGLVDE
Sbjct: 565 GLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDE 624

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             + F+ M++ + I+ + EHY C+ D+LGR GK+ +A E V  +  + N   +WG+LL +
Sbjct: 625 AKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNA-AVWGALLAA 683

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
            R+H   EL  + A+KL  ++   S  G HVLL+N YA  G W++V KVRK M++  ++K
Sbjct: 684 SRVHRDPELGRLAAEKLFILEPEKS--GTHVLLANTYASAGMWDDVAKVRKLMKDSKVKK 741

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           E   SW+++   V+ F   D+ HP++  IY  L+ L   M  AG   + N  VD
Sbjct: 742 EPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAG--YVPNVEVD 793



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 209/465 (44%), Gaps = 62/465 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +A  +F  +     V WN  I G V +     A+ L  QMK S    +   +T SS
Sbjct: 251 GDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV--FTLSS 308

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKACA +    +G+ +H   ++  ++   ++   L++MY+             K+  +D
Sbjct: 309 ILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYA-------------KHGLLD 355

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            +K     KVFD + +R++V WN ++S      ++ EA+  F  M + G   +  +   V
Sbjct: 356 DAK-----KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAV 410

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +SL        V+ L  KLG  +++D  V +  I  Y +  C ++A ++F+     
Sbjct: 411 LKSTASLEAISDTRQVHALAEKLG--FLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSY 468

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +   + +MI    Q +H  +AI+LF+++L   LD    D     S L+A + L   + G+
Sbjct: 469 DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDP---DPFVLSSLLNACASLSAYEQGK 525

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           Q+HA++IK      V   NA++                    E+ VVSW+ MI    Q+G
Sbjct: 526 QVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHG 585

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
                L + + M  +    + +T+T++L A ++    D  K+ +   ++     E  E +
Sbjct: 586 HGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR-YFNSMKEMFGIERTEEH 644

Query: 451 ---LIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIAG 487
              +ID+  ++G +  A ++     F+ N       A W A++A 
Sbjct: 645 YACMIDLLGRAGKLDDAMELVNSMPFQTN------AAVWGALLAA 683



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 160/324 (49%), Gaps = 15/324 (4%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           T+  LL+  +  ++   G   HA+LL+ G+ F    ++L+  Y+K  L  +AR++F+  +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGL-FAVFRNHLLSFYSKCRLPGSARRVFD--E 62

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             D    +W++++  Y+ N +  +A  AFR M   +V  N   +  VL  C P  +   G
Sbjct: 63  IPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP--DAGFG 119

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQ 591
            QLH  ++   L  ++FV  +L+ MY   G ++ A  VF +   E+N+V++  ++  Y +
Sbjct: 120 TQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVK 179

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPST 650
           +     A+ +F  M   G++P+   F  V++AC+ +  ++ G ++  + ++  Y     T
Sbjct: 180 NDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
            +   + DM  ++G +  A     ++ E   V   W + +  C LHGH + A    + LL
Sbjct: 240 AN--ALVDMYSKLGDIRMAAVVFGKVPETDVV--SWNAFISGCVLHGHDQHA---LELLL 292

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGN 734
           +M +   +P    L S + A  G+
Sbjct: 293 QMKSSGLVPNVFTLSSILKACAGS 316


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 257/800 (32%), Positives = 398/800 (49%), Gaps = 104/800 (13%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           P LP    +SP    L T  + S L+  C  G    A  + + +T    V WN +I   +
Sbjct: 78  PALPSEPFISPR--SLGTGVVASYLA--C--GATDYALLVLERVTPSPAVWWNLLIREHI 131

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                  AI +  +M ++   T  D++T   VLKAC E  + R G A H   I C    S
Sbjct: 132 KQGRLDSAINVSCRMLRAG--TRPDHFTLPHVLKACGELPSYRCGSAFH-GLICCNGFES 188

Query: 142 R-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWNTI 197
             F+ N+L+ MYS C S  +A M+                  FD + +R   +V++WN+I
Sbjct: 189 NVFICNALVAMYSRCGSLEEASMI------------------FDEITQRGIDDVISWNSI 230

Query: 198 VSWYVKTERYVEAVRQF-RMMLRMGIRPST-----ISFVNVFPALSSLGDYKSADVVYGL 251
           VS +VK+     A+  F +M L +  +P+      IS VN+ PA  SL        V+G 
Sbjct: 231 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 290

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            ++ G+    D+FV ++ I  YA+ G  + A K+F+    ++   WN M+ GY Q+ +  
Sbjct: 291 AIRNGT--FPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 348

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            A ELF  + + +                                               
Sbjct: 349 AAFELFKNMRKEN----------------------------------------------- 361

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I  DVV+W  +I+ + Q G   E L L  +M   G + + VT+ ++LSA ++L     G 
Sbjct: 362 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 421

Query: 432 QTHAYLLRHGI-----HFEGME------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           + HAY L++ +      F G +      + LIDMY+K    K AR IF+     +R+  T
Sbjct: 422 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 481

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           W  MI G+ Q G   +A   F +M+   + V PN  TI+ +L AC  +  I +GKQ+H +
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541

Query: 539 SIRYLLDQN--VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            +R+   ++   FV   LIDMYSK G ++ A +VF  + +K+++++T+M+ GYG HG   
Sbjct: 542 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 601

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL +F  M+  G  PD ITF+ VL ACS+ G+VD+GL  FD M  +Y + P  EHY C 
Sbjct: 602 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 661

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+L R G++ +A+  VK++  E   + +W +LL +CR+H + ELAE    KL+EM+  N
Sbjct: 662 IDLLARSGRLDKAWRTVKDMPMEPTAV-VWVALLSACRVHSNVELAEHALNKLVEMNAEN 720

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
              G + L+SNIYA  G W++V ++R  M++ G++K  GCSW+        F   D+ HP
Sbjct: 721 D--GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 778

Query: 777 QSHKIYEMLERLAMEMRNAG 796
            S +IY +LE L   ++  G
Sbjct: 779 LSPQIYALLESLIDRIKAMG 798


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/704 (31%), Positives = 367/704 (52%), Gaps = 76/704 (10%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL---------- 159
           Y ++LK C ET N    K +H H I+    P  F+ N+L++ Y+  L S+          
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAK-LGSIPYACKVFDQM 70

Query: 160 -DAEMVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
               +     +   YSK   V +   +FD M RR+ V+WN+++S Y       ++V+ + 
Sbjct: 71  PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 216 MMLRM--GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           +ML+       + I+F  +    S  G  K    ++G +VK G  +++ +FV S  + MY
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFG--FMSYVFVGSPLVDMY 188

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           +++G    ARK+FD   E+N  ++NT+I G ++     ++  LF ++             
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMR------------ 236

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
                                                  ERD +SW +MI+ F QNGLD 
Sbjct: 237 ---------------------------------------ERDSISWTSMITGFTQNGLDR 257

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           + + +  EM+ +   +D  T  ++L+A   +     GKQ HAY++R        + S L+
Sbjct: 258 DAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALV 317

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K   IK+A  +F+K     ++  +W AM+ GY QNG  EEA   F  M ++ + P+
Sbjct: 318 DMYCKCKNIKSAEAVFKKMTC--KNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPD 375

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             T+ SV+ +C  + ++E G Q H  ++   L   + V  +L+ +Y K G I  +  +F 
Sbjct: 376 DFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFN 435

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +I  K+ VT+T ++ GY Q G +   + LF SM   G++PD +TF+ VLSACS AGLV++
Sbjct: 436 EISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEK 495

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G QIF+ M  E+ I P  +HY C+ D+  R G++ EA  F+ ++    + +  W +LL S
Sbjct: 496 GNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAIS-WATLLSS 554

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR +G+ ++ +  A+ L+E+D  N+    +VLLS++YA +G WE V ++RK+MR++GLRK
Sbjct: 555 CRFYGNMDIGKWAAEFLMELDPHNTAS--YVLLSSVYAAKGKWEEVARLRKDMRDKGLRK 612

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           E GCSWI     V+ F++ D+ +P S +IY  LE+L  +M   G
Sbjct: 613 EPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEG 656



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 244/543 (44%), Gaps = 90/543 (16%)

Query: 33  PIPKLKT-PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL 91
           P P L +  TI S  SK+   GR      LFD++ R   V WN++I G+    L Y+++ 
Sbjct: 71  PHPNLYSWNTILSAYSKL---GRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            Y+ M K+    + +  T+S++L   ++   +++G+ +H H ++       FV + L++M
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 152 YS-----TCLSSLDAEM------------VGL-KYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           YS     +C   +  E+            +GL +   V+ SK     ++F  MR R+ ++
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK-----RLFFEMRERDSIS 242

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W ++++ + +     +A+  FR M    ++    +F +V  A   +   +    V+  ++
Sbjct: 243 WTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYII 302

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           +  ++Y +++FVAS+ + MY +      A  +F     +N   W  M+ GY QN +  EA
Sbjct: 303 R--TDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEA 360

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
           ++ F  + +   I  DD T  S +S+ + L  L+ G Q HA  + + +   + V NA++ 
Sbjct: 361 VKTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVT 419

Query: 374 --------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                               +D V+W  ++S + Q G  +E + L   M   G   D VT
Sbjct: 420 LYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVT 479

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK--N 471
              +LSA S                                  ++GL++   QIFE   N
Sbjct: 480 FIGVLSACS----------------------------------RAGLVEKGNQIFESMIN 505

Query: 472 DSGDRD-QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
           + G    Q  +  MI  +++ G +EEA     +M     +P+ ++ A++L +C   GN++
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM---PFSPDAISWATLLSSCRFYGNMD 562

Query: 531 LGK 533
           +GK
Sbjct: 563 IGK 565


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/639 (35%), Positives = 355/639 (55%), Gaps = 40/639 (6%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM-MLRMGIRPSTISFVNVFPALSSLGD 241
           FD +  R+V AWN ++S Y +     E +R F + ML  G++P   +F +V  A  ++ D
Sbjct: 109 FDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD 168

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
               + ++ L +K G  ++ D++VA+S I +Y   G    AR +FD    R+   WN MI
Sbjct: 169 ---GNKIHCLALKFG--FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMI 223

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q+ +  EA+ L   +  +D      VT +S LSA ++  + + G  +H+Y IK+ +
Sbjct: 224 SGYCQSGNAKEALTLSDGLRAMDS-----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + V N +I+                    RD++SWN++I A+  N      ++L  E
Sbjct: 279 ESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQE 338

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSG 459
           M+      D +T+ +L S  S L      +    + LR G   E +   + ++ MYAK G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN--VTPNVVTIA 517
           L+ +AR +F  N   ++D  +WN +I+GY QNG   EA   +  M E    ++ N  T  
Sbjct: 399 LVDSARAVF--NWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWV 456

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SVLPAC+  G +  G +LHG  ++  L  +VFVGTSL DMY K G ++ A ++F +IP  
Sbjct: 457 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRV 516

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           NSV + T+I  +G HG  E+A+ LF+ M   G++PD ITFV +LSACS++GLVDEG   F
Sbjct: 517 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCF 576

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           ++MQ +Y I PS +HY C+ D+ GR G++  A  F+K +  + +   IWG+LL +CR+HG
Sbjct: 577 EMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDA-SIWGALLSACRVHG 635

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           + +L ++ ++ L E++  +   GYHVLLSN+YA  G WE VD++R     +GLRK  G S
Sbjct: 636 NVDLGKIASEHLFEVEPEH--VGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWS 693

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++V   V  F + +Q HP   ++Y  L  L  +++  G
Sbjct: 694 SMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVG 732



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 172/659 (26%), Positives = 294/659 (44%), Gaps = 110/659 (16%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C  G   LAR  FD I       WN +I G+       E I  +S    SS     D  T
Sbjct: 97  CYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQP-DYRT 155

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           + SVLKAC   RN+  G  +HC  ++       +V  SL+++Y    + ++A +      
Sbjct: 156 FPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARI------ 206

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STIS 228
                       +FD M  R++ +WN ++S Y ++    EA     + L  G+R   +++
Sbjct: 207 ------------LFDEMPTRDMGSWNAMISGYCQSGNAKEA-----LTLSDGLRAMDSVT 249

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V++  A +  GD+     ++   +K G E  ++LFV++  I +YAE G     +K+FD 
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLE--SELFVSNKLIDLYAEFGSLKDCQKVFDR 307

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WN++I  Y  N  P+ AI LF Q + L  I  D +T +S  S +SQL E+  
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAILLF-QEMRLSRIQPDCLTLISLASILSQLGEIRA 366

Query: 349 GQQLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            + +  + + K +    + + NAV+                     +DV+SWNT+IS + 
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYA 426

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDS-----VTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           QNG   E + +   M+++G  I +     V+V    S A  LR    G + H  LL++G+
Sbjct: 427 QNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQ---GMKLHGRLLKNGL 483

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           + +  + + L DMY K G +  A  +F +      +   WN +IA +  +G  E+A + F
Sbjct: 484 YLDVFVGTSLADMYGKCGRLDDALSLFYQIPR--VNSVPWNTLIACHGFHGHGEKAVMLF 541

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSK 560
           ++ML+  V P+ +T  ++L AC+  G ++ G+         Y +  ++     ++D+Y +
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGR 601

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           +G +  A N    +P                                  ++PDA  + A+
Sbjct: 602 AGQLEIALNFIKSMP----------------------------------LQPDASIWGAL 627

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH---YCCVADMLGRVGKVVEAYEFVKEL 676
           LSAC   G VD G      +  E+  +   EH   +  +++M    GK    +E V E+
Sbjct: 628 LSACRVHGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYASAGK----WEGVDEI 677



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/518 (26%), Positives = 241/518 (46%), Gaps = 59/518 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    AR LFD +       WN +I G+  +    EA+ L   ++      + D+ T
Sbjct: 196 CRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR------AMDSVT 249

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             S+L AC E  +   G  +H + I+       FV N L+++Y        AE   LK  
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY--------AEFGSLKDC 301

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +          KVFD M  R++++WN+I+  Y   E+ + A+  F+ M    I+P  ++ 
Sbjct: 302 Q----------KVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTL 351

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +++   LS LG+ ++   V G  ++ G  ++ D+ + ++ + MYA+LG  D AR +F+  
Sbjct: 352 ISLASILSQLGEIRACRSVQGFTLRKG-WFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 410

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELF-VQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ++   WNT+I GY QN    EAIE++ +   E  EI  +  T++S L A SQ   L  
Sbjct: 411 PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQ 470

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQ 388
           G +LH  ++KN + L V V  ++ +                     + V WNT+I+    
Sbjct: 471 GMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGF 530

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LRHGIHFEGM 447
           +G  ++ +ML  EM  +G   D +T   LLSA S+    D G+     +   +GI    +
Sbjct: 531 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGIT-PSL 589

Query: 448 ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           + Y  ++D+Y ++G ++ A   F K+     D + W A+++    +G ++   +A   + 
Sbjct: 590 KHYGCMVDLYGRAGQLEIALN-FIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLF 648

Query: 506 E--------HNVTPNVVTIASVLPACNPMGNIELGKQL 535
           E        H +  N+   A      + + +I  GK L
Sbjct: 649 EVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL 686


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 239/769 (31%), Positives = 400/769 (52%), Gaps = 50/769 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+F  ++    V W  ++ G+  + L  EA  LYSQM  ++   +   Y  SSVL AC
Sbjct: 97  ARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPT--PYVLSSVLSAC 154

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            + +    G+ +H    +       FV N+L+ +Y                  + +  + 
Sbjct: 155 TKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALY------------------LGFGSFK 196

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M   + V +NT++S + +      A++ F  M   G+RP  ++  ++  A +
Sbjct: 197 LAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACA 256

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+GD +    ++  L+K G  +  D     S + +Y + G  + A  IF+     N  +W
Sbjct: 257 SVGDLQKGKQLHSYLLKAGMSF--DYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLW 314

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  Y Q +   ++ E+F Q ++   I  +  T+   L   +   +++LG+Q+H+  I
Sbjct: 315 NLMLVAYGQISDLAKSFEIFGQ-MQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           KN      +V+  +I              +L  + +RDVVSW +MI+ +VQ+   +E L 
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQ  G   D++ + +  SA + ++    G Q HA +   G   +  + + L+++YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G  + A  +F + +   +D+ TWN +I+G+ Q+ L ++A + F +M +     NV T 
Sbjct: 494 RCGRSEEAFSLFREIEH--KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTF 551

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S + A   + +I+ GKQ+HG +++        V  +LI +Y K G I  A  +F+++  
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSL 611

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL LF  MK  G++P+ +TF+ VL+ACS+ GLV+EGL  
Sbjct: 612 RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSY 671

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M   Y + P  +HY CV D+LGR G++  A  FV E+    N + IW +LL +C++H
Sbjct: 672 FKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAM-IWRTLLSACKVH 730

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E+ AK LLE++  +S    +VLLSN YA  G W N D+VRK M++RG+RKE G 
Sbjct: 731 KNIEIGELAAKHLLELEPHDSAS--YVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGR 788

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           SWI+V   V+ F   D+ HP S +IY+ L  L   +   G K  +N N+
Sbjct: 789 SWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQ-ENPNL 836



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 229/461 (49%), Gaps = 34/461 (7%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D  + +  I +YA+ G    AR++F     R+   W  M+ GY Q+    EA  L+ Q +
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQ-M 135

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
               ++       S LSA ++ +    G+ +HA + K        V NA+I         
Sbjct: 136 HWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSF 195

Query: 373 ---ER--------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
              ER        D V++NT+IS   Q G  +  L +  EMQ  G   D VTV +LL+A 
Sbjct: 196 KLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +++ +   GKQ H+YLL+ G+ F+ + E  L+D+Y K G I+TA  IF   + GDR    
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF---NLGDRTNVV 312

Query: 481 -WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            WN M+  Y Q   L ++F  F QM    + PN  T   +L  C   G IELG+Q+H  S
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLS 372

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+   + +++V   LIDMYSK G ++ A  +   + +++ V++T+MI GY QH   E AL
Sbjct: 373 IKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEAL 432

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVAD 658
           + F+ M+ CG+ PD I   +  SAC+    + +GLQI   +    Y    S   +  + +
Sbjct: 433 ATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI--WNTLVN 490

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL---GSCRLH 696
           +  R G+  EA+   +E+  +  +   W  L+   G  RL+
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEI--TWNGLISGFGQSRLY 529



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)

Query: 507 HNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           H+       +   L AC   GN   L  ++H  S+   L  +  +G  LID+Y+K+G++ 
Sbjct: 36  HHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVW 95

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF ++  ++ V++  M+ GY Q G+ + A  L+  M    + P      +VLSAC+
Sbjct: 96  QARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACT 155

Query: 626 YAGLVDEGLQI 636
              L  +G  I
Sbjct: 156 KGKLFAQGRMI 166


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 251/820 (30%), Positives = 423/820 (51%), Gaps = 65/820 (7%)

Query: 5   SVPLPLPPPPPTATPPPPQLP--QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLF 62
           ++ + L     T+T P  ++   Q+H  + P+ +     + +R   + ++  P  A+QLF
Sbjct: 2   TLNMTLRALTNTSTNPILRIRRYQLHCHANPLLQSHVVALNAR--TLLRDSDPRFAQQLF 59

Query: 63  DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRN 122
           D          N ++  +   +   EA+ L+  + +S    S D+YT S VL  CA + N
Sbjct: 60  DQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSG--LSPDSYTMSCVLSVCAGSFN 117

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
             +G+ VHC  ++C       V NSL++MY+   +  D                    +V
Sbjct: 118 GTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGR------------------RV 159

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTISFVNVFPALSSLGD 241
           FD M  R+VV+WN++++ Y    R+ + V + F +M   G RP   +   V  AL++ G 
Sbjct: 160 FDEMGDRDVVSWNSLLTGY-SWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGA 218

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++ L+VKLG E   +  V +S I M ++ G    AR +FDN   +++  WN+MI
Sbjct: 219 VAIGMQIHALVVKLGFE--TERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMI 276

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            G+V N   +EA E F   ++L        TF S + + + L+EL L + LH   +K+ +
Sbjct: 277 AGHVINGQDLEAFETFNN-MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGL 335

Query: 362 ALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +    VL A++                      + VVSW  MIS ++QNG  D+ + L  
Sbjct: 336 STNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFS 395

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LIDMYAK 457
            M+++G   +  T + +L+    +++     + HA +++   ++E   S    L+D + K
Sbjct: 396 LMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVIK--TNYEKSSSVGTALLDAFVK 449

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I  A ++FE  ++  +D   W+AM+AGY Q G  EEA   F Q+    + PN  T  
Sbjct: 450 IGNISDAVKVFELIET--KDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFC 507

Query: 518 SVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           S++ AC  P  ++E GKQ H ++I+  L+  + V +SL+ +Y+K G I  A  +F +  E
Sbjct: 508 SIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKE 567

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ V++ +MI GY QHG +++AL +F  M+   +E DAITF+ V+SAC++AGLV +G   
Sbjct: 568 RDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNY 627

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F++M  ++ I P+ EHY C+ D+  R G + +A + +  +        +W  +L + R+H
Sbjct: 628 FNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPP-AATVWRIVLAASRVH 686

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + EL ++ A+K++ ++ ++S    +VLLSNIYA  GNW     VRK M +R ++KE G 
Sbjct: 687 RNIELGKLAAEKIISLEPQHSAA--YVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGY 744

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V      F + D  HP S  IY  L  L   +R+ G
Sbjct: 745 SWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVG 784


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 257/800 (32%), Positives = 398/800 (49%), Gaps = 104/800 (13%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           P LP    +SP    L T  + S L+  C  G    A  + + +T    V WN +I   +
Sbjct: 85  PALPSEPFISPR--SLGTGVVASYLA--C--GATDYALLVLERVTPSPAVWWNLLIREHI 138

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                  AI +  +M ++   T  D++T   VLKAC E  + R G A H   I C    S
Sbjct: 139 KQGRLDSAINVSCRMLRAG--TRPDHFTLPHVLKACGELPSYRCGSAFH-GLICCNGFES 195

Query: 142 R-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWNTI 197
             F+ N+L+ MYS C S  +A M+                  FD + +R   +V++WN+I
Sbjct: 196 NVFICNALVAMYSRCGSLEEASMI------------------FDEITQRGIDDVISWNSI 237

Query: 198 VSWYVKTERYVEAVRQF-RMMLRMGIRPST-----ISFVNVFPALSSLGDYKSADVVYGL 251
           VS +VK+     A+  F +M L +  +P+      IS VN+ PA  SL        V+G 
Sbjct: 238 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 297

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            ++ G+    D+FV ++ I  YA+ G  + A K+F+    ++   WN M+ GY Q+ +  
Sbjct: 298 AIRNGT--FPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFE 355

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            A ELF  + + +                                               
Sbjct: 356 AAFELFKNMRKEN----------------------------------------------- 368

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I  DVV+W  +I+ + Q G   E L L  +M   G + + VT+ ++LSA ++L     G 
Sbjct: 369 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 428

Query: 432 QTHAYLLRHGI-----HFEGME------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           + HAY L++ +      F G +      + LIDMY+K    K AR IF+     +R+  T
Sbjct: 429 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 488

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           W  MI G+ Q G   +A   F +M+   + V PN  TI+ +L AC  +  I +GKQ+H +
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548

Query: 539 SIRYLLDQN--VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            +R+   ++   FV   LIDMYSK G ++ A +VF  + +K+++++T+M+ GYG HG   
Sbjct: 549 VLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 608

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL +F  M+  G  PD ITF+ VL ACS+ G+VD+GL  FD M  +Y + P  EHY C 
Sbjct: 609 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 668

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+L R G++ +A+  VK++  E   + +W +LL +CR+H + ELAE    KL+EM+  N
Sbjct: 669 IDLLARSGRLDKAWRTVKDMPMEPTAV-VWVALLSACRVHSNVELAEHALNKLVEMNAEN 727

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
              G + L+SNIYA  G W++V ++R  M++ G++K  GCSW+        F   D+ HP
Sbjct: 728 D--GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 785

Query: 777 QSHKIYEMLERLAMEMRNAG 796
            S +IY +LE L   ++  G
Sbjct: 786 LSPQIYALLESLIDRIKAMG 805


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 226/749 (30%), Positives = 396/749 (52%), Gaps = 52/749 (6%)

Query: 77  IIGFVCNNLPYEAILLYSQMKK--SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
           II     NL  EA+  +   +K  SSP  S    TY+ ++ AC+  R+L  G+ +H H +
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKS---VTYTHLINACSSLRSLEHGRKIHRHML 125

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
            C   P   + N +L+MY  C S  +A                    +FD+M  +NVV+W
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEAR------------------NMFDSMPLKNVVSW 167

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            +++S Y +      A+  +  MLR G  P   +F ++  + S L D+K A  ++  ++K
Sbjct: 168 TSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLK 227

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
             SE+  DL   ++ I MY +      A  +F   + ++   W +MI G+ Q  + +EA+
Sbjct: 228 --SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---------------- 358
             F ++L       ++  F SA SA S+L E D G+Q+H   IK                
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345

Query: 359 ----NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                F+     V   + + D+V+WN +I+ F       E      +M+  G + + VTV
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS 473
            +LL A S     + G Q H+Y+++ G + +  + + L+ MY+K   +  A Q+FE  D 
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE--DI 463

Query: 474 GDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           G++ D  +WN ++    Q     E     + M    + P+ VT+ +VL +   + + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            Q+H F ++  L+ ++ V  +LI+MY+K G +  A  +F  I   + ++++++I+GY Q 
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  + A  LFR+M+G G++P+ ITFV +L+ACS+ G+V+EGL+++  MQ++Y+I P+ EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
             C+ D+L R G +  A +F+K++    +V+ +W +LL +C++HG+ E+ +  A+ +L++
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIKQMPFVPDVV-VWKTLLAACKVHGNLEVGKRAAENVLKI 702

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS     V+L NI+A  G+W++  ++R  MR   + K  G SWI++   V+ F ++D
Sbjct: 703 DPSNSAAV--VMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAED 760

Query: 773 QEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
             HP+  KIY MLE L +++ + G   +Q
Sbjct: 761 NLHPERGKIYTMLEELMLQILDDGCDPLQ 789



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 279/561 (49%), Gaps = 50/561 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FDS+     V W ++I G+        AI LY QM +S      D++T+ S++K+C
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP--DHFTFGSIVKSC 209

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   + ++ + +H H ++          N+L++MY+                   +S+  
Sbjct: 210 SGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYT------------------KFSQMA 251

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
               VF  +  +++++W ++++ + +    +EA+  FR ML   + +P+   F + F A 
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L +      ++GL +K G    +DLF   S   MYA+ G  + AR +F +  + +   
Sbjct: 312 SKLLEPDCGRQIHGLCIKFG--LGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVA 369

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I G+   ++  E+   F Q +    +V +DVT LS L A S+   L+ G Q+H+YI
Sbjct: 370 WNAIIAGFASVSNAKESSSFFSQ-MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 357 IKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEG 395
           +K    L + V N+++                     + D+VSWNT+++A +Q     E 
Sbjct: 429 VKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEV 488

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L   M       D VT+T +L ++  + + +VG Q H ++++ G++ +  + + LI+M
Sbjct: 489 LRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINM 548

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y K G ++ AR++F+    G+ D  +W+++I GY Q G  +EAF  FR M    V PN +
Sbjct: 549 YTKCGSLECARKMFDS--IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEI 606

Query: 515 TIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T   +L AC+ +G +E G +L+      Y +       + ++D+ +++G ++ A +   +
Sbjct: 607 TFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQ 666

Query: 574 IP-EKNSVTYTTMILGYGQHG 593
           +P   + V + T++     HG
Sbjct: 667 MPFVPDVVVWKTLLAACKVHG 687



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 195/427 (45%), Gaps = 38/427 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F  I +P  V WN II GF   +   E+   +SQM+ +      ++ T  S+L AC
Sbjct: 355 ARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVP--NDVTVLSLLCAC 412

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +E   L  G  VH + ++   N    V NSLL+MYS C +  DA    L+  E       
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDA----LQVFE------- 461

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                 D   + ++V+WNT+++  ++  +  E +R  ++M    I+P  ++  NV  +  
Sbjct: 462 ------DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +  Y+    ++  ++K G     D+ V+++ I MY + G  + ARK+FD+    +   W
Sbjct: 516 QIASYEVGSQIHCFIMKSGLNL--DISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           +++I GY Q     EA ELF  +  L  +  +++TF+  L+A S +  ++ G +L+  + 
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGLKLYRTMQ 632

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           +++   P         ++  S   M+    + G  D     + +M    F+ D V    L
Sbjct: 633 EDYRISPT--------KEHCS--CMVDLLARAGCLDVAEDFIKQMP---FVPDVVVWKTL 679

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT---ARQIFEKNDSG 474
           L+A     N +VGK+    +L+           L +++A SG  K     R    + D G
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739

Query: 475 DRDQATW 481
                +W
Sbjct: 740 KVPGQSW 746


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/702 (33%), Positives = 379/702 (53%), Gaps = 54/702 (7%)

Query: 121 RNLRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
           ++L+ G+A+H   I+  S+ S  ++ NSL+N Y+ C     A++V               
Sbjct: 21  KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLV--------------- 65

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEA--VRQFRMMLRMGIRPSTISFVNVFPALS 237
              FD +  ++V++WN +++ Y +      +  +  F+ M    I P+  +F  +F A S
Sbjct: 66  ---FDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAAS 122

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L         + + +K+   Y  D+FV SS + MY + G    AR++FD   ERN   W
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFY--DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTW 180

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            TMI GY       EA E+F +++  +E   ++  F S LSA++  + +D G+Q+H   +
Sbjct: 181 ATMISGYAIQRLAGEAFEVF-ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAV 239

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K  + + + +LNA++                    +++ ++W+ MI+ + Q+G   + L 
Sbjct: 240 KTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALK 299

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDM 454
           L   M   G      T+  +L+A S+    + GKQ H YLL+ G  FE    + + L+DM
Sbjct: 300 LFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLG--FESQLYIMTALVDM 357

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAKSG+ + AR+ F  N     D   W +MIAGY QNG  E+A   + +M    + PN +
Sbjct: 358 YAKSGVTEDARKGF--NYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNEL 415

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+ASVL AC+ +   + G+Q+H  +I+Y L   V +G++L  MY+K G +     VF ++
Sbjct: 416 TMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRM 475

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           PE++ +++  MI G  Q+G  + AL LF  M+    +PD +TFV VLSACS+ GLVD G 
Sbjct: 476 PERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGW 535

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             F +M  E+ + P  EHY C+ D+L R GK+ EA EF++    + + L +W  LLG+CR
Sbjct: 536 LYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTID-HGLCLWRILLGACR 594

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            + + EL     +KL+E+ ++ S    +VLLS IY   G  E+V++VR  M+ RG+ KE 
Sbjct: 595 NYRNYELGAYAGEKLMELGSQESSA--YVLLSGIYTALGRPEDVERVRSMMKVRGVSKEP 652

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           GCSWI++   V+ F   DQ HP   +I   + RL+ +M++ G
Sbjct: 653 GCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEG 694



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 247/500 (49%), Gaps = 52/500 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL--LYSQMKKSSPYTSCDNYTYSSVLK 115
           A+ +FD I     + WN +I G+        + +  L+ +M+  +     + +T+S +  
Sbjct: 62  AKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILP--NAHTFSGIFT 119

Query: 116 ACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A +   ++  G+  H   I+  CF +   FV +SLLNMY  C + L  E           
Sbjct: 120 AASNLSSIFFGQQAHAVAIKMACFYDV--FVGSSLLNMY--CKAGLLFEAR--------- 166

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  +VFD M  RN V W T++S Y       EA   F +M R     +  +F +V 
Sbjct: 167 -------EVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVL 219

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            AL+      S   ++ L VK G   +  L + ++ + MYA+ G  D + ++F+   ++N
Sbjct: 220 SALAVPEFVDSGKQIHCLAVKTG--LLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKN 277

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           +  W+ MI GY Q+    +A++LF + +    I   + T +  L+A S    ++ G+Q+H
Sbjct: 278 SITWSAMITGYAQSGDSHKALKLFSR-MHFAGINPSEFTLVGVLNACSDACAVEEGKQVH 336

Query: 354 AYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDD 393
            Y++K      + ++ A+++                     D+V W +MI+ +VQNG ++
Sbjct: 337 NYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENE 396

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           + L L   MQ +G + + +T+ ++L A SNL   D G+Q HA  +++G+  E  + S L 
Sbjct: 397 DALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALS 456

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYAK G ++    +F +    +RD  +WNAMI+G +QNG  +EA   F +M + +  P+
Sbjct: 457 TMYAKCGNLEEGNIVFRRMP--ERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPD 514

Query: 513 VVTIASVLPACNPMGNIELG 532
            VT  +VL AC+ MG ++ G
Sbjct: 515 DVTFVNVLSACSHMGLVDSG 534



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 219/466 (46%), Gaps = 46/466 (9%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    AR++FD +     V W T+I G+    L  EA  ++  M++     
Sbjct: 151 SLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEE-- 208

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             + + ++SVL A A    +  GK +HC  ++        + N+L+ MY+ C  SLD  +
Sbjct: 209 DVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC-GSLDDSL 267

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF+    +N + W+ +++ Y ++    +A++ F  M   GI 
Sbjct: 268 -----------------QVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGIN 310

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  + V V  A S     +    V+  L+KLG E  + L++ ++ + MYA+ G  + AR
Sbjct: 311 PSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFE--SQLYIMTALVDMYAKSGVTEDAR 368

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K F+   + +  +W +MI GYVQN    +A+ L+ + ++++ I+ +++T  S L A S L
Sbjct: 369 KGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCR-MQMEGILPNELTMASVLKACSNL 427

Query: 344 QELDLGQQLHAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMI 383
              D G+Q+HA  IK  + L V                    IV   + ERD++SWN MI
Sbjct: 428 AAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMI 487

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   QNG   E L L  EM++Q    D VT   +LSA S++   D G      +      
Sbjct: 488 SGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGL 547

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
              +E Y  ++D+ +++G +  A++  E   + D     W  ++  
Sbjct: 548 LPKVEHYACMVDVLSRAGKLYEAKEFIEST-TIDHGLCLWRILLGA 592


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/766 (30%), Positives = 395/766 (51%), Gaps = 74/766 (9%)

Query: 58  ARQLFDSITR-----PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           A Q+FD ++      P   +WN +I G+       E +  + +M++ S Y +        
Sbjct: 109 ALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELSWYMA-------- 160

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
                        G+ +H + IR       ++  +L+ MYS+C   ++A           
Sbjct: 161 -------------GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEA----------- 196

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              + L  K+ +   R N+VAWN ++  +V+   + +++  + +      +  + SF   
Sbjct: 197 ---WSLFGKLEN---RSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGA 250

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A S          V+  ++K+   + +D +V +S + MYA+ G  + A+K+FD  L++
Sbjct: 251 FTACSHGEVLDFGRQVHCDVIKM--NFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDK 308

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
             E+ N MI  ++ N    +A+ L+ + ++  E   D  T  S LS  S +   D G+ +
Sbjct: 309 EVELRNAMISAFIGNGRAYDALGLYNK-MKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 367

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA +IK  +   V + +A++                    ERDVV+W +MI+ F QN   
Sbjct: 368 HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF 427

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            + L L   M+K+G   DS  +T+++SA   L N ++G   H + ++ G+  +  +   L
Sbjct: 428 KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 487

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY+K G  ++A  +F  +   +++   WN+MI+ Y+ NGL E +     Q+L+H    
Sbjct: 488 VDMYSKFGFAESAEMVF--SSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 545

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + V+I +VL A + +  +  GK LH + IR  +  ++ V  +LIDMY K G + YA  +F
Sbjct: 546 DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 605

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +P +N VT+ +MI GYG HG  E A+ LF+ MK     PD +TF+A++++CS++G+V+
Sbjct: 606 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 665

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL +F LM+ EY ++P  EHY  V D+LGR G++ +AY F++ +  + +   +W  LL 
Sbjct: 666 EGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD-RSVWLCLLF 724

Query: 692 SCRLHGHSELAEVVAKKLLEMD-TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           +CR H + EL E+VA  LL+M+  R S    +V L N+Y E   W+    +R  M+ RGL
Sbjct: 725 ACRAHRNMELGELVADNLLKMEPARGS---NYVPLLNLYGEVEMWDRAANLRASMKGRGL 781

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +K  GCSWI+V   V+ F S D    +  +IY+ L  L   M   G
Sbjct: 782 KKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 178/668 (26%), Positives = 303/668 (45%), Gaps = 74/668 (11%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N+ I   V      +A+ L+S+   S+  T+   +T+ S+LK CA   NL  G+ +H   
Sbjct: 24  NSKIKALVQQGKYSQALELHSKTPHSALTTA--KFTFPSLLKTCASLSNLYHGRTIHASI 81

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---- 189
           +        ++  SL+NMY  C         GL              +VFD M       
Sbjct: 82  VTMGLQSDPYIATSLINMYVKC---------GL---------LGSALQVFDKMSESRDSA 123

Query: 190 -NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
            ++  WN ++  Y K   + E + QF  M                     L  Y +   +
Sbjct: 124 PDITVWNPVIDGYFKYGHFEEGLAQFCRM-------------------QELSWYMAGRQI 164

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER-NTEVWNTMIGGYVQN 307
           +G +++  + +  D ++ ++ I MY+       A  +F     R N   WN MIGG+V+N
Sbjct: 165 HGYIIR--NMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI 366
               +++EL+  + + +       +F  A +A S  + LD G+Q+H  +IK NF   P +
Sbjct: 223 GMWEKSLELY-SLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281

Query: 367 -------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                              V + V++++V   N MISAF+ NG   + L L  +M+    
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 341

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
            +DS T+++LLS  S + + D G+  HA +++  +     ++S L+ MY K G  + A  
Sbjct: 342 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADS 401

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F      +RD   W +MIAG+ QN   ++A   FR M +  V  +   + SV+ A   +
Sbjct: 402 VFYTMK--ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 459

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
            N+ELG  +HGF+I+  L+ +VFV  SL+DMYSK G    A  VF+ +P KN V + +MI
Sbjct: 460 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 519

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
             Y  +G+ E +++L   +   G   D+++   VL A S    + +G +     Q   +I
Sbjct: 520 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQI 578

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
               +    + DM  + G +  A    + +      L  W S++     HG+ E A  + 
Sbjct: 579 PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN--LVTWNSMIAGYGSHGNCEEAVRLF 636

Query: 707 KKLLEMDT 714
           K++   +T
Sbjct: 637 KEMKRSET 644



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 224/461 (48%), Gaps = 48/461 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+   + G    A+++FD +      + N +I  F+ N   Y+A+ LY++MK     T
Sbjct: 284 SLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE--T 341

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D++T SS+L  C+   +   G+ VH   I+     +  + ++LL MY  C S+ DA+ 
Sbjct: 342 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD- 400

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF TM+ R+VVAW ++++ + +  R+ +A+  FR M + G++
Sbjct: 401 -----------------SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 443

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
             +    +V  A   L + +   +++G  +K G E  +D+FVA S + MY++ G  + A 
Sbjct: 444 ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLE--SDVFVACSLVDMYSKFGFAESAE 501

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +F +   +N   WN+MI  Y  N  P  +I L  Q+L+      D V+  + L AVS +
Sbjct: 502 MVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQ-HGFYLDSVSITTVLVAVSSV 560

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
             L  G+ LHAY I+  +   + V NA+I+                    R++V+WN+MI
Sbjct: 561 AALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMI 620

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LRHGI 442
           + +  +G  +E + L  EM++     D VT  AL+++ S+    + G      + + +G+
Sbjct: 621 AGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGV 680

Query: 443 HFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
               ME Y  ++D+  ++G +  A   F +    D D++ W
Sbjct: 681 E-PRMEHYASVVDLLGRAGRLDDAYS-FIRGMPIDADRSVW 719


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/599 (35%), Positives = 347/599 (57%), Gaps = 30/599 (5%)

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   ++     A S L D +   +++   +  G    ++LFV S+ + +Y +   
Sbjct: 106 KTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDG--VASNLFVGSAIVDLYFKFTR 163

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + ARK+FD   ER+T +WNTMI G+ +N++  ++I +FV +L++  + FD  T  + L+
Sbjct: 164 AELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG-LSFDSTTLATVLT 222

Query: 339 AVSQLQELDLG---------QQLHA--YIIKNFVAL---------PVIVLNAVIERDVVS 378
           AV++LQE  LG         + LH+  Y++   ++L           I+ + + + D++S
Sbjct: 223 AVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLIS 282

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           +N MIS +  N   +  + L  E+   G  ++S T+  L+       +  + +      L
Sbjct: 283 YNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSL 342

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + GI  +  + + L  +Y +   ++ ARQ+F+  +S ++  A+WNAMI+GYTQNGL + A
Sbjct: 343 KIGIILQPSVSTALTTVYCRLNEVQFARQLFD--ESPEKSLASWNAMISGYTQNGLTDRA 400

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F++M+   ++PN VT+ S+L AC  +G + +GK +HG      L+ NV+V T+L+DM
Sbjct: 401 ISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDM 459

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I  A  +F  + +KN VT+  MI GYG HG  + AL LF  M   GI P  +TF
Sbjct: 460 YAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTF 519

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +++L ACS++GLV EG +IF  M   Y  QP +EHY C+ D+LGR G++  A EF++ + 
Sbjct: 520 LSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMP 579

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E     +WG+LLG+C +H ++E+A V +K+L ++D  N   GY+VLLSNIY+ + N+  
Sbjct: 580 LEPGP-AVWGALLGACMIHKNTEMANVASKRLFQLDPENV--GYYVLLSNIYSTDRNFPK 636

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              VR+ +++R L K  GC+ I++      F S D+ HPQ+  I+EMLE+L  +MR AG
Sbjct: 637 AASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 258/544 (47%), Gaps = 57/544 (10%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           RQLF+ +++P   ++N +I GF  N LP  +I LY+ ++K +     DN+TY+  + A +
Sbjct: 66  RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRP-DNFTYAFAISAAS 124

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
              + R+G  +H H I      + FV ++++++Y                    +++ +L
Sbjct: 125 RLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLY------------------FKFTRAEL 166

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD M  R+ V WNT++S + +   + +++R F  ML +G+   + +   V  A++ 
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L +Y+    +  L  K G    +D++V +  I +Y++ G     R +FD   + +   +N
Sbjct: 227 LQEYRLGMGIQCLASKKGLH--SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  N+    A+ LF ++L   + V +  T +  +        L L + +    +K
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRV-NSSTLVGLIPVYLPFNHLQLSRLIQNLSLK 343

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
             + L   V  A+                     E+ + SWN MIS + QNGL D  + L
Sbjct: 344 IGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISL 403

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES------YLI 452
             EM  Q    + VTVT++LSA + L    +GK  H       I  E +ES       L+
Sbjct: 404 FQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGL-----IKSERLESNVYVSTALV 457

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G I  ARQ+F+     D++  TWNAMI GY  +G  +EA   F +ML+  + P 
Sbjct: 458 DMYAKCGSIVEARQLFDL--MVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515

Query: 513 VVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  S+L AC+  G +  G ++ H  +  Y           ++D+  ++G +  A    
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575

Query: 572 AKIP 575
            ++P
Sbjct: 576 ERMP 579



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 223/477 (46%), Gaps = 51/477 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R  LAR++FD +    TV+WNT+I GF  N+   ++I ++  M       S D+ T ++V
Sbjct: 163 RAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG--LSFDSTTLATV 220

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L A AE +  R+G  + C   +   +   +V   L+++YS C  S    +          
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRI---------- 270

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +FD + + +++++N ++S Y        AV  FR +L  G R ++ + V + 
Sbjct: 271 --------LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P        + + ++  L +K+G   +    V+++   +Y  L    FAR++FD   E++
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIG--IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI GY QN     AI LF +++   ++  + VT  S LSA +QL  L +G+ +H
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEMMP--QLSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 354 AYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
             I         +V+  ++              + + +++++VV+WN MI+ +  +G   
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGMESY-- 450
           E L L YEM + G     VT  ++L A S+      G +  H+    +G  F+ M  +  
Sbjct: 499 EALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG--FQPMSEHYA 556

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++D+  ++G +  A +  E+    +   A W A++     +   E A VA +++ +
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPL-EPGPAVWGALLGACMIHKNTEMANVASKRLFQ 612



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 22/215 (10%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           I +LS  I  +  P++ + L+ + C+      ARQLFD     +   WN +I G+  N L
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
              AI L+ +M    P  S +  T +S+L ACA+   L IGK VH          + +V 
Sbjct: 397 TDRAISLFQEMM---PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS 453

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            +L++MY+ C S ++A                   ++FD M  +NVV WN +++ Y    
Sbjct: 454 TALVDMYAKCGSIVEAR------------------QLFDLMVDKNVVTWNAMITGYGLHG 495

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
              EA++ F  ML+ GI P+ ++F+++  A S  G
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSG 530



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q  A L+ HGIH++    + L   +   G +   RQ+F  N     D   +N +I G++ 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLF--NKVSKPDLFLFNVLIRGFSD 89

Query: 491 NGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           NGL + +   +  + +  N+ P+  T A  + A + + +  +G  LH  SI   +  N+F
Sbjct: 90  NGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           VG++++D+Y K      A  VF  +PE+++V + TMI G+ ++   E ++ +F  M   G
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209

Query: 610 IEPDAITFVAVLSACS 625
           +  D+ T   VL+A +
Sbjct: 210 LSFDSTTLATVLTAVA 225


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/624 (35%), Positives = 351/624 (56%), Gaps = 24/624 (3%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM-MLRMGIRPSTISFVNVFPALSSLG 240
            FD ++ R+V AWN ++S Y +     E +R F + ML  G+ P   +F +V  A  ++ 
Sbjct: 41  TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI 100

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D    + ++ L +K G  ++ D++VA+S I +Y+       AR +FD    R+   WN M
Sbjct: 101 D---GNKIHCLALKFG--FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAM 155

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY Q+ +  EA+ L   +  +D      VT +S LSA ++  + + G  +H+Y IK+ 
Sbjct: 156 ISGYCQSGNAKEALTLSNGLRAMDS-----VTVVSLLSACTEAGDFNRGVTIHSYSIKHG 210

Query: 361 VALPVI-----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +   ++     V + +  RD++SWN++I A+  N      + L  EM+      D +T+ 
Sbjct: 211 LESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 270

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDS 473
           +L S  S L +    +    + LR G   E +   + ++ MYAK GL+ +AR +F  N  
Sbjct: 271 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF--NWL 328

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELG 532
            + D  +WN +I+GY QNG   EA   +  M E   +  N  T  SVLPAC+  G +  G
Sbjct: 329 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 388

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            +LHG  ++  L  +VFV TSL DMY K G +  A ++F +IP  NSV + T+I  +G H
Sbjct: 389 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 448

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  E+A+ LF+ M   G++PD ITFV +LSACS++GLVDEG   F++MQ +Y I PS +H
Sbjct: 449 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 508

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ DM GR G++  A +F+K +  + +   IWG+LL +CR+HG+ +L ++ ++ L E+
Sbjct: 509 YGCMVDMYGRAGQLETALKFIKSMSLQPDA-SIWGALLSACRVHGNVDLGKIASEHLFEV 567

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           +  +   GYHVLLSN+YA  G WE VD++R     +GLRK  G S ++V   V  F + +
Sbjct: 568 EPEHV--GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGN 625

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
           Q HP   ++Y  L  L  +++  G
Sbjct: 626 QTHPMYEEMYRELTALQAKLKMIG 649



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 165/649 (25%), Positives = 278/649 (42%), Gaps = 130/649 (20%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           FD I       WN +I G+       E I  +S    SS  T  D  T+ SVLKAC   R
Sbjct: 42  FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP-DYRTFPSVLKAC---R 97

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            +  G  +HC  ++       +V  SL+++YS             +Y  V  ++      
Sbjct: 98  TVIDGNKIHCLALKFGFMWDVYVAASLIHLYS-------------RYKAVGNARI----- 139

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STISFVNVFPALSSLG 240
           +FD M  R++ +WN ++S Y ++    EA     + L  G+R   +++ V++  A +  G
Sbjct: 140 LFDEMPVRDMGSWNAMISGYCQSGNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAG 194

Query: 241 DYKSADVVYGLLVKLG--SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           D+     ++   +K G  SE + D                    +K+FD    R+   WN
Sbjct: 195 DFNRGVTIHSYSIKHGLESELLRD-------------------CQKVFDRMYVRDLISWN 235

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII- 357
           ++I  Y  N  P+ AI LF Q + L  I  D +T +S  S +SQL ++   + +  + + 
Sbjct: 236 SIIKAYELNEQPLRAISLF-QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR 294

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K +    + + NAV+                      DV+SWNT+IS + QNG   E + 
Sbjct: 295 KGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 354

Query: 398 LVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
           +   M+++G    +  T  ++L A S       G + H  LL++G++ +  + + L DMY
Sbjct: 355 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 414

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G ++ A  +F +      +   WN +IA +  +G  E+A + F++ML+  V P+ +T
Sbjct: 415 GKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 472

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             ++L AC                                   S SG+++     F  + 
Sbjct: 473 FVTLLSAC-----------------------------------SHSGLVDEGQWCFEMMQ 497

Query: 576 EKNSVT-----YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
               +T     Y  M+  YG+ G  E AL   +SM    ++PDA  + A+LSAC   G V
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSACRVHGNV 554

Query: 631 DEGLQIFDLMQQEYKIQPSTEH---YCCVADMLGRVGKVVEAYEFVKEL 676
           D G      +  E+  +   EH   +  +++M    GK    +E V E+
Sbjct: 555 DLG-----KIASEHLFEVEPEHVGYHVLLSNMYASAGK----WEGVDEI 594



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 197/446 (44%), Gaps = 47/446 (10%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S L + CQ        ++FD +     + WN+II  +  N  P  AI L+ +M+ S  
Sbjct: 211 LESELLRDCQ--------KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI 262

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLD 160
              C   T  S+    ++  ++R  ++V    +R  +      + N+++ MY+       
Sbjct: 263 QPDC--LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK------ 314

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
              +GL    VD ++      VF+ +   +V++WNTI+S Y +     EA+  + +M   
Sbjct: 315 ---LGL----VDSAR-----AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEE 362

Query: 221 G-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           G I  +  ++V+V PA S  G  +    ++G L+K G     D+FV +S   MY + G  
Sbjct: 363 GEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNG--LYLDVFVVTSLADMYGKCGRL 420

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           + A  +F      N+  WNT+I  +  + H  +A+ LF ++L+ + +  D +TF++ LSA
Sbjct: 421 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD-EGVKPDHITFVTLLSA 479

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            S    +D GQ     +  ++   P           +  +  M+  + + G  +  L  +
Sbjct: 480 CSHSGLVDEGQWCFEMMQTDYGITP----------SLKHYGCMVDMYGRAGQLETALKFI 529

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             M  Q    D+    ALLSA     N D+GK    +L        G    L +MYA +G
Sbjct: 530 KSMSLQP---DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 586

Query: 460 LIKTARQIFE-KNDSGDRDQATWNAM 484
             +   +I    +  G R    W++M
Sbjct: 587 KWEGVDEIRSIAHGKGLRKTPGWSSM 612


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 254/800 (31%), Positives = 409/800 (51%), Gaps = 58/800 (7%)

Query: 24  LPQIHS---LSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           LP  H+   ++  +P L    +  R  SK+   GR   AR+LFD +     V W + I  
Sbjct: 30  LPLAHARAVVTGALPDLFLANLLLRAYSKL---GRVRDARRLFDRMPHKNLVSWGSAISM 86

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
              +    +A+ L++  +++S   + + +  +S L+ACA++R +  G+ VH   +R   +
Sbjct: 87  HAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLD 146

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            + +V  +L+N+Y+  +  +DA M+                 VFD +  +N V W  +++
Sbjct: 147 GNVYVGTALINLYAK-VGCIDAAML-----------------VFDALPVKNPVTWTAVIT 188

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            Y +  +   A+  F  M   G+RP      +   A S+LG  +     +G   ++  E 
Sbjct: 189 GYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVE- 247

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEVWNTMIGGYVQNNHPVEAIELFV 318
             D  V ++ I +Y +      ARK+FD C+E RN   W TMI GY+QN+   EA+ +F 
Sbjct: 248 -TDASVINALIDLYCKCSRLSLARKLFD-CMENRNLVSWTTMIAGYMQNSCDAEAMAMFW 305

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------ 366
           Q L  +    D     S L++   L  +  G+Q+HA+ IK       +V   +I      
Sbjct: 306 Q-LSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKC 364

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY-EMQKQGFMIDSVTVTAL 417
                   V  A+ E D +S+N MI  + + G D  G + V+ +M+        +T  +L
Sbjct: 365 EHLTEARAVFEALAEDDAISYNAMIEGYSRLG-DLAGAIDVFSKMRYCSLKPSPLTFVSL 423

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L  +S+    ++ KQ H  +++ G   +    S LID+Y+K  L++ A+ +F  N   +R
Sbjct: 424 LGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVF--NLMHNR 481

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D   WNAMI G  QN   EEA   F Q+    + PN  T  +++   + + ++  G+Q H
Sbjct: 482 DMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFH 541

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
              I+   D +  V  +LIDMY+K G I     +F     K+ + + +MI  Y QHG +E
Sbjct: 542 AQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAE 601

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL +FR M G G+EP+ +TFV VLSAC++AGLVDEGL+ FD M+ +Y I+P TEHY  V
Sbjct: 602 EALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASV 661

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            ++ GR GK+  A EF++ +  E     +W SLL +C L G+ E+     +  L  D  +
Sbjct: 662 VNLFGRSGKLHAAKEFIERMPIE-PAAAVWRSLLSACHLFGNVEIGRYATEMALLADPAD 720

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S P   VL+SNIYA  G W +  K+R+ M   G+ KE G SWI+V   V+ F ++ +EHP
Sbjct: 721 SGPS--VLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHP 778

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           ++  IY +L+ L   ++N G
Sbjct: 779 EADVIYSLLDELTSILKNGG 798


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/643 (33%), Positives = 361/643 (56%), Gaps = 31/643 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  M  R+V +WN +V  Y K   + EA+  +  ML   IRP+  +F +V    + + D
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++  +++ G E  +D+ V ++ I MY + G    AR +FD   +R+   WN MI
Sbjct: 214 IARGKEIHAHVIRFGFE--SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMI 271

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +N   +E +ELF  + EL  +  D +T  +  SA   L    LG+ +H Y++K+  
Sbjct: 272 SGYFENGGGLEGLELFSMMREL-SVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEF 330

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + + N++I+                    +DVVSW  MI++ V + L  + +     
Sbjct: 331 GGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKM 390

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGL 460
           M+ +G + D +T+ ++LSA + + + D+G + H   ++ G+    + S  LIDMY+K   
Sbjct: 391 MELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKC 450

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  A ++F +N SG ++  +W ++I G   N    EA + FRQM E ++ PN VT+ SVL
Sbjct: 451 VDNALEVF-RNISG-KNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVL 507

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +G +  GK++H  ++R  +  + F+  +++DMY + G    A N F    +K+  
Sbjct: 508 SACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVT 566

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            +  ++ GY Q G ++ A+ LF  M    I PD ITF+++L ACS +G+V EGL+ F++M
Sbjct: 567 AWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIM 626

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           + +Y + P+ +HY CV D+LGR G++ +AY+F++++    +   IWG+LL +CR+H + E
Sbjct: 627 KNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDA-AIWGALLNACRIHRNVE 685

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L E+ AK++ E D  N   GY++LL N+YA  GNW+ V KVR  MRERGL  + GCSW++
Sbjct: 686 LGEIAAKRVFEKD--NKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVE 743

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNS 803
           + G V+ F S D  H QS +I  +L+    +M+  G   +++S
Sbjct: 744 IKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSS 786



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 262/539 (48%), Gaps = 53/539 (9%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  ++      WN ++ G+       EA+ LY +M  +    +   YT+ SVLK CA  
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV--YTFPSVLKTCAGV 211

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            ++  GK +H H IR        V N+L+ MY  C    +A M                 
Sbjct: 212 SDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM----------------- 254

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            +FD M +R+ ++WN ++S Y +    +E +  F MM  + + P  I+   V  A   L 
Sbjct: 255 -LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +    V+G +VK  SE+  D+ + +S I MY+ LG  + A  +F     ++   W  M
Sbjct: 314 NERLGRGVHGYVVK--SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I   V +  P +A+E + +++EL+ I+ D++T +S LSA + +  LDLG +LH   IK  
Sbjct: 372 IASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTG 430

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   VIV N++I+                    ++VVSW ++I     N    E L+   
Sbjct: 431 LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M K+    +SVT+ ++LSA + +     GK+ HA+ LR G+ F+G + + ++DMY + G
Sbjct: 491 QM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
               A   F   +S  +D   WN ++ GY Q G  + A   F +MLE  + P+ +T  S+
Sbjct: 550 RKVPALNQF---NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 520 LPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           L AC+  G +  G  L  F+I   +Y L  N+     ++D+  ++G ++ A +    +P
Sbjct: 607 LCACSKSGMVTEG--LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMP 663



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 265/532 (49%), Gaps = 43/532 (8%)

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV--A 266
           +A+++   ML + I     +++    AL  L +++ A      + +L S   + L V   
Sbjct: 80  QAMKRLESMLELRIEVEEDAYI----ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ + M+   G    A  +F    ER+   WN ++GGY +     EA+ L+ ++L   EI
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRML-WAEI 194

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             +  TF S L   + + ++  G+++HA++I+      V V NA+I              
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 +RD +SWN MIS + +NG   EGL L   M++     D +T+T + SA   L N
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 427 QDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           + +G+  H Y+++    F G   M + LI MY+  G ++ A  +F + +S  +D  +W A
Sbjct: 315 ERLGRGVHGYVVKS--EFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES--KDVVSWTA 370

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIA    + L  +A   ++ M    + P+ +T+ SVL AC  +G+++LG +LH  +I+  
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTG 430

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L  +V V  SLIDMYSK   ++ A  VF  I  KN V++T++ILG   +  S  AL  FR
Sbjct: 431 LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADMLG 661
            MK   ++P+++T ++VLSAC+  G +  G +I        +     + +    + DM  
Sbjct: 491 QMKE-SMKPNSVTLISVLSACARIGALMRGKEIH---AHALRTGVGFDGFLPNAILDMYV 546

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
           R G+ V A   + +   +   +  W  LL      G ++LA  +  K+LE++
Sbjct: 547 RCGRKVPA---LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 220/495 (44%), Gaps = 77/495 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + +   + WN +I G+  N    E + L+S M++ S     D  T ++V  AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS--VDPDLITMTTVASAC 309

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N R+G+ VH + ++        + NSL+ MYS+     +AE               
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAE--------------- 354

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  ++VV+W  +++  V  +   +AV  ++MM   GI P  I+ V+V  A +
Sbjct: 355 ---TVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACA 411

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G       ++ + +K G   V+ + V++S I MY++  C D A ++F N   +N   W
Sbjct: 412 CIGHLDLGIRLHEIAIKTG--LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I G   NN   EA+  F Q+ E   +  + VT +S LSA +++  L  G+++HA+ +
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  V     + NA+++                   +DV +WN +++ + Q G     + L
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVEL 587

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
             +M +     D +T  +LL A S                + G+  EG+E + I M  K 
Sbjct: 588 FDKMLELEIHPDEITFISLLCACS----------------KSGMVTEGLEYFNI-MKNKY 630

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
            L    +               +  ++    + G L++A+   + M    + P+     +
Sbjct: 631 NLTPNLKH--------------YACVVDILGRAGQLDDAYDFIQDM---PIRPDAAIWGA 673

Query: 519 VLPACNPMGNIELGK 533
           +L AC    N+ELG+
Sbjct: 674 LLNACRIHRNVELGE 688



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 25/290 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A  +F  +     V W  +I   V + LP++A+  Y  M+        D  T  S
Sbjct: 348 GRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILP--DEITLVS 405

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   +L +G  +H   I+        V NSL++MYS C           K V   
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKC-----------KCV--- 451

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               D   +VF  +  +NVV+W +++       R  EA+  FR M +  ++P++++ ++V
Sbjct: 452 ----DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISV 506

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + +G       ++   ++ G  +  D F+ ++ + MY   G    A   F N  ++
Sbjct: 507 LSACARIGALMRGKEIHAHALRTGVGF--DGFLPNAILDMYVRCGRKVPALNQF-NSQKK 563

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           +   WN ++ GY Q      A+ELF ++LEL EI  D++TF+S L A S+
Sbjct: 564 DVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACSK 612



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%)

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G LE+A      MLE  +        ++L  C      + G +++           V +G
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +L+ M+ + G +  A  VF K+ E++  ++  ++ GY + G  + AL+L+  M    I 
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 612 PDAITFVAVLSACSYAGLVDEGLQI 636
           P+  TF +VL  C+    +  G +I
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEI 220


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/643 (33%), Positives = 361/643 (56%), Gaps = 31/643 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  M  R+V +WN +V  Y K   + EA+  +  ML   IRP+  +F +V    + + D
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++  +++ G E  +D+ V ++ I MY + G    AR +FD   +R+   WN MI
Sbjct: 214 IARGKEIHAHVIRFGFE--SDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMI 271

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +N   +E +ELF  + EL  +  D +T  +  SA   L    LG+ +H Y++K+  
Sbjct: 272 SGYFENGGGLEGLELFSMMREL-SVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEF 330

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + + N++I+                    +DVVSW  MI++ V + L  + +     
Sbjct: 331 GGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKM 390

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGL 460
           M+ +G + D +T+ ++LSA + + + D+G + H   ++ G+    + S  LIDMY+K   
Sbjct: 391 MELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKC 450

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  A ++F +N SG ++  +W ++I G   N    EA + FRQM E ++ PN VT+ SVL
Sbjct: 451 VDNALEVF-RNISG-KNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVL 507

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +G +  GK++H  ++R  +  + F+  +++DMY + G    A N F    +K+  
Sbjct: 508 SACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVT 566

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            +  ++ GY Q G ++ A+ LF  M    I PD ITF+++L ACS +G+V EGL+ F++M
Sbjct: 567 AWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIM 626

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           + +Y + P+ +HY CV D+LGR G++ +AY+F++++    +   IWG+LL +CR+H + E
Sbjct: 627 KNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDA-AIWGALLNACRIHRNVE 685

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L E+ AK++ E D  N   GY++LL N+YA  GNW+ V KVR  MRERGL  + GCSW++
Sbjct: 686 LGEIAAKRVFEKD--NKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVE 743

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNS 803
           + G V+ F S D  H QS +I  +L+    +M+  G   +++S
Sbjct: 744 IKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSS 786



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 262/539 (48%), Gaps = 53/539 (9%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  ++      WN ++ G+       EA+ LY +M  +    +   YT+ SVLK CA  
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV--YTFPSVLKTCAGV 211

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            ++  GK +H H IR        V N+L+ MY  C    +A M                 
Sbjct: 212 SDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM----------------- 254

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            +FD M +R+ ++WN ++S Y +    +E +  F MM  + + P  I+   V  A   L 
Sbjct: 255 -LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +    V+G +VK  SE+  D+ + +S I MY+ LG  + A  +F     ++   W  M
Sbjct: 314 NERLGRGVHGYVVK--SEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I   V +  P +A+E + +++EL+ I+ D++T +S LSA + +  LDLG +LH   IK  
Sbjct: 372 IASLVSHKLPFKAVETY-KMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTG 430

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   VIV N++I+                    ++VVSW ++I     N    E L+   
Sbjct: 431 LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M K+    +SVT+ ++LSA + +     GK+ HA+ LR G+ F+G + + ++DMY + G
Sbjct: 491 QM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
               A   F   +S  +D   WN ++ GY Q G  + A   F +MLE  + P+ +T  S+
Sbjct: 550 RKVPALNQF---NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 520 LPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           L AC+  G +  G  L  F+I   +Y L  N+     ++D+  ++G ++ A +    +P
Sbjct: 607 LCACSKSGMVTEG--LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMP 663



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 265/532 (49%), Gaps = 43/532 (8%)

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV--A 266
           +A+++   ML + I     +++    AL  L +++ A      + +L S   + L V   
Sbjct: 80  QAMKRLESMLELRIEVEEDAYI----ALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ + M+   G    A  +F    ER+   WN ++GGY +     EA+ L+ ++L   EI
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRML-WAEI 194

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             +  TF S L   + + ++  G+++HA++I+      V V NA+I              
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 +RD +SWN MIS + +NG   EGL L   M++     D +T+T + SA   L N
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 427 QDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           + +G+  H Y+++    F G   M + LI MY+  G ++ A  +F + +S  +D  +W A
Sbjct: 315 ERLGRGVHGYVVKS--EFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES--KDVVSWTA 370

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIA    + L  +A   ++ M    + P+ +T+ SVL AC  +G+++LG +LH  +I+  
Sbjct: 371 MIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTG 430

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L  +V V  SLIDMYSK   ++ A  VF  I  KN V++T++ILG   +  S  AL  FR
Sbjct: 431 LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFR 490

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADMLG 661
            MK   ++P+++T ++VLSAC+  G +  G +I        +     + +    + DM  
Sbjct: 491 QMKE-SMKPNSVTLISVLSACARIGALMRGKEIH---AHALRTGVGFDGFLPNAILDMYV 546

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
           R G+ V A   + +   +   +  W  LL      G ++LA  +  K+LE++
Sbjct: 547 RCGRKVPA---LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 220/495 (44%), Gaps = 77/495 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + +   + WN +I G+  N    E + L+S M++ S     D  T ++V  AC
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS--VDPDLITMTTVASAC 309

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N R+G+ VH + ++        + NSL+ MYS+     +AE               
Sbjct: 310 ELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAE--------------- 354

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  ++VV+W  +++  V  +   +AV  ++MM   GI P  I+ V+V  A +
Sbjct: 355 ---TVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACA 411

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G       ++ + +K G   V+ + V++S I MY++  C D A ++F N   +N   W
Sbjct: 412 CIGHLDLGIRLHEIAIKTG--LVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSW 469

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I G   NN   EA+  F Q+ E   +  + VT +S LSA +++  L  G+++HA+ +
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKE--SMKPNSVTLISVLSACARIGALMRGKEIHAHAL 527

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  V     + NA+++                   +DV +WN +++ + Q G     + L
Sbjct: 528 RTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVEL 587

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
             +M +     D +T  +LL A S                + G+  EG+E + I M  K 
Sbjct: 588 FDKMLELEIHPDEITFISLLCACS----------------KSGMVTEGLEYFNI-MKNKY 630

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
            L    +               +  ++    + G L++A+   + M    + P+     +
Sbjct: 631 NLTPNLKH--------------YACVVDILGRAGQLDDAYDFIQDM---PIRPDAAIWGA 673

Query: 519 VLPACNPMGNIELGK 533
           +L AC    N+ELG+
Sbjct: 674 LLNACRIHRNVELGE 688



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 25/290 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A  +F  +     V W  +I   V + LP++A+  Y  M+        D  T  S
Sbjct: 348 GRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILP--DEITLVS 405

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   +L +G  +H   I+        V NSL++MYS C           K V   
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKC-----------KCV--- 451

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               D   +VF  +  +NVV+W +++       R  EA+  FR M +  ++P++++ ++V
Sbjct: 452 ----DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVTLISV 506

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + +G       ++   ++ G  +  D F+ ++ + MY   G    A   F N  ++
Sbjct: 507 LSACARIGALMRGKEIHAHALRTGVGF--DGFLPNAILDMYVRCGRKVPALNQF-NSQKK 563

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           +   WN ++ GY Q      A+ELF ++LEL EI  D++TF+S L A S+
Sbjct: 564 DVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACSK 612



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%)

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G LE+A      MLE  +        ++L  C      + G +++           V +G
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            +L+ M+ + G +  A  VF K+ E++  ++  ++ GY + G  + AL+L+  M    I 
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 612 PDAITFVAVLSACSYAGLVDEGLQI 636
           P+  TF +VL  C+    +  G +I
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEI 220


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/773 (30%), Positives = 402/773 (52%), Gaps = 57/773 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    A ++F  +     V WN +I G+V      EA+LL+ +MKK+    + ++ T
Sbjct: 106 CKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAG--LTPNSRT 163

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             ++L AC E   LR+G+ +H + +R          N L +M +   ++L    VG    
Sbjct: 164 VVALLLACGEMLELRLGQEIHGYCLR----------NGLFDMDAYVGTAL----VGF--- 206

Query: 170 EVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
              Y ++D V   +VF  M  RN+V+WN I++ ++      +A++ +  ML  GI+   +
Sbjct: 207 ---YMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + + V  A +  G  +    ++ L +K     +NDLF+ ++ + MY++ G  + +  +F+
Sbjct: 264 TMLVVIQACAEYGCLRLGMQLHQLAIKF--NLINDLFILNALLNMYSDNGSLESSWALFN 321

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                +  +WN+MI  Y+      EAI LF++ + L+ I  D  T    LS  + L +  
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIK-MRLERIKEDVRTIAIMLSLCNDLNDGS 380

Query: 348 L-GQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAF 386
           + G+ LHA+ +K+ + L   + NA++                      DV+SWNTMISAF
Sbjct: 381 IWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF 440

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            Q+    +   L   M +     +S T+ +LL+   +  +   G+  H + +++G+    
Sbjct: 441 AQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINT 500

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L +MY   G  + A  +F +     RD  +WN++I+ Y +N    +A + F  M+
Sbjct: 501 SLNTSLTEMYINCGDERAATNMFTR--CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGV 563
              + PN VTI ++L +C  + ++ LG+ LH ++ R    L+ +  +  + I MY++ G 
Sbjct: 559 SE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + YA  +F  +  ++ V++  MI GYG HG    A   F  M   G +P+ ++F +VLSA
Sbjct: 618 LQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSA 677

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS++GL   GLQ+F  M +++ I P   HY C+ D+LGR G   EA  F+  +  E +  
Sbjct: 678 CSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDA- 736

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            IW +LL SC++  +++L E +  KL+E++  N  PG  +LLSNIYA  G W  V ++RK
Sbjct: 737 SIWRALLSSCQIKSNNKLLETIFGKLVELEPSN--PGNFILLSNIYAAAGLWSEVVQIRK 794

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +RERGL K  G SWI +G  V+ F + D  HPQS +IYE L  L   +R+ G
Sbjct: 795 WLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 220/453 (48%), Gaps = 27/453 (5%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WN+I+  + K +     +  +  M  +GI P + +   V  A   L    +   ++  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFI- 86

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
             G + +ND+ V ++ +  Y + G    A K+F    ER+   WN +I GYV      EA
Sbjct: 87  -RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEA 145

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVI 366
           + LFV+ ++   +  +  T ++ L A  ++ EL LGQ++H Y ++N       +V   ++
Sbjct: 146 VLLFVE-MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        V + ++ R++VSWN +I+ F+  G   + L L   M  +G   D+VT
Sbjct: 205 GFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVT 264

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           +  ++ A +      +G Q H   ++   I+   + + L++MY+ +G ++++  +F  N 
Sbjct: 265 MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALF--NA 322

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL- 531
               D A WN+MI+ Y   G   EA   F +M    +  +V TIA +L  CN + +  + 
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW 382

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+ LH  +++  ++ + ++G +L+ MY K   I  A  VF K+   + +++ TMI  + Q
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ 442

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                +A  LF  M    I+ ++ T V++L+ C
Sbjct: 443 SMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 35/422 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   +  +   A+ +F+ +     + WNT+I  F  +    +A  L+  M +S      
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESE--IKF 463

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           ++YT  S+L  C +  +L  G+++H   I+     +  +  SL  MY  C     A    
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT--- 520

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                           +F    +R++V+WN+++S Y+K +   +A+  F  M+   + P+
Sbjct: 521 ---------------NMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPN 564

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +++ +N+  + + L        ++    +       D  +A++ I MYA  G   +A KI
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   WN MI GY  +    +A   F Q+L+ D    ++V+F S LSA S    
Sbjct: 625 FCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD-DGFKPNNVSFASVLSACSHSGL 683

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
              G QL   ++++F   P           +  +  M+    + G   E +  +  M  +
Sbjct: 684 TVTGLQLFHSMVRDFGIAP----------QLTHYGCMVDLLGRGGHFSEAIAFINSMPIE 733

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
               D+    ALLS+     N  + +     L+       G    L ++YA +GL     
Sbjct: 734 P---DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVV 790

Query: 466 QI 467
           QI
Sbjct: 791 QI 792



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 89/167 (53%), Gaps = 7/167 (4%)

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL  T  Q    N S D     WN++I  +T+          + QM    +TP+  T+  
Sbjct: 11  GLSSTPEQTHLVNVSKD-----WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPL 65

Query: 519 VLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           VL AC  +  I  G ++H F IR L L  +V VGT+L+D Y K G++  A+ VF ++PE+
Sbjct: 66  VLKACGRLNAIGNGVRIHSF-IRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER 124

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + V++  +I GY      + A+ LF  MK  G+ P++ T VA+L AC
Sbjct: 125 DLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLAC 171


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/729 (31%), Positives = 390/729 (53%), Gaps = 52/729 (7%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S +  TY ++L+ C   R    G  VH +  +  +     + N+LL+M+           
Sbjct: 91  SVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMF----------- 139

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
             +++ ++  + Y     VF  M  R++ +WN +V  Y K   + EA+  +  ML +GIR
Sbjct: 140 --VRFGDLVEAWY-----VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   +F  V      L D      V+  +++ G E  +D+ V ++ I MY + G    AR
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFE--SDVDVVNALITMYVKCGDIFSAR 250

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD    R+   WN MI GY +N+  +E + LF  + E   +  D +T  S +SA   L
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDLMTMTSVISACEAL 309

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
            +  LG+++H Y+IK      V V N++I+                    +D+VSW  MI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI- 442
           S + +NGL ++ +     M+ +G + D +T+ ++LSA + L   D G   H +  R G+ 
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + + LIDMY+K   I  A ++F +    +++  +W ++I G   N    EA   F+
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHR--IPNKNVISWTSIILGLRLNYRSFEALFFFQ 487

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           QM+  ++ PN VT+ SVL AC  +G +  GK++H  ++R  L  + F+  +L+DMY + G
Sbjct: 488 QMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A N F    EK+  ++  ++ GY Q G    A+ LF  M    + PD ITF ++L 
Sbjct: 547 RMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLC 605

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS +G+V +GL+ F+ M+ ++ I P+ +HY  V D+LGR G++ +AYEF+K++  + + 
Sbjct: 606 ACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDP 665

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LL +CR++ + EL E+ A+ + EMDT++   GY++LL N+YA+ G W+ V +VR
Sbjct: 666 -AIWGALLNACRIYQNVELGELAAQHIFEMDTKSV--GYYILLCNLYADSGKWDEVARVR 722

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG---NKT 799
           K MRE  L  + GCSW++V G V+ F + D  HPQ  +I  +LE    +M   G   +K 
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKD 782

Query: 800 IQNSNVDAT 808
            +  ++DA+
Sbjct: 783 SRRDDIDAS 791



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
           ++  ++ T+++ L      +    G ++H+Y+ K    L V + NA++            
Sbjct: 89  QVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEA 148

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                   ERD+ SWN ++  + + G  DE L L + M   G   D  T   +L     L
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   G++ H +++R+G   +  + + LI MY K G I +AR +F++     RD+ +WNA
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR--RDRISWNA 266

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MI+GY +N +  E    F  M E  V P+++T+ SV+ AC  +G+  LG+++HG+ I+  
Sbjct: 267 MISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
               V V  SLI M+S  G  + A  VF+K+  K+ V++T MI GY ++G+ E+A+  + 
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DM 659
            M+  G+ PD IT  +VLSAC+  GL+D+G     +M  E+  +     Y  VA    DM
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDM 441

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             +   + +A E    +  + NV+  W S++   RL+  S
Sbjct: 442 YSKCRCIDKALEVFHRIPNK-NVIS-WTSIILGLRLNYRS 479



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 243/545 (44%), Gaps = 83/545 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD + R   + WN +I G+  N++  E + L+  M++   +   D  T +SV+ AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF--FVDPDLMTMTSVISAC 306

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               + R+G+ VH + I+        V NSL+ M+S+     +AEM              
Sbjct: 307 EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEM-------------- 352

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +++V+W  ++S Y K     +AV  + +M   G+ P  I+  +V  A +
Sbjct: 353 ----VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408

Query: 238 SLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            LG      +++    + G + YV    VA+S I MY++  C D A ++F     +N   
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYV---IVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS 465

Query: 297 WNTMIGGYVQNNHPVEAIELFVQ-VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           W ++I G   N    EA+  F Q +L L     + VT +S LSA +++  L  G+++HA+
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQMILSLKP---NSVTLVSVLSACARIGALSCGKEIHAH 522

Query: 356 IIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLDDEGL 396
            ++  +     + NA++                   E+DV SWN +++ + Q G     +
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAV 582

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L ++M +     D +T T+LL A S                R G+  +G+E Y   M  
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACS----------------RSGMVTDGLE-YFESMEH 625

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K  +    +               + +++    + G LE+A+   ++M    + P+    
Sbjct: 626 KFHIAPNLKH--------------YASVVDLLGRAGRLEDAYEFIKKM---PIDPDPAIW 668

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC    N+ELG +L    I  +  ++V     L ++Y+ SG  +  A V  KI  
Sbjct: 669 GALLNACRIYQNVELG-ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARV-RKIMR 726

Query: 577 KNSVT 581
           +N +T
Sbjct: 727 ENRLT 731



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 11/259 (4%)

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY--- 436
           N++I      G  ++ L+ +  MQ+    ++  T  ALL      R    G + H+Y   
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 437 -LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            + R G+    + + L+ M+ + G +  A  +F K    +RD  +WN ++ GY + G  +
Sbjct: 123 TVTRLGVR---LGNALLSMFVRFGDLVEAWYVFGK--MAERDLFSWNVLVGGYAKAGYFD 177

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           EA   + +ML   + P+V T   VL  C  + ++  G+++H   IRY  + +V V  +LI
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MY K G I  A  VF ++P ++ +++  MI GY ++ +    L LF  M+   ++PD +
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLM 297

Query: 616 TFVAVLSACSYAGLVDEGL 634
           T  +V+SAC   G  DE L
Sbjct: 298 TMTSVISACEALG--DERL 314


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 240/767 (31%), Positives = 391/767 (50%), Gaps = 49/767 (6%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           ++G    AR++F+ ++    V W  ++ G+  N L  EA+ LY QM  S    +   Y  
Sbjct: 89  KKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT--PYVL 146

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC +      G+ VH    +  S     V N+L+ +Y                  
Sbjct: 147 SSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALY------------------ 188

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           + +    L  +VF  M   + V +NT++S + +      A+  F  M   G  P  ++  
Sbjct: 189 LRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIA 248

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  A +S+GD      ++  L+K G     D  +  S + +Y + G    A +IF +  
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMS--PDYIIEGSLLDLYVKCGVIVEALEIFKSGD 306

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             N  +WN M+  Y Q +   ++ +LF Q++    +  ++ T+   L   +   E++LG+
Sbjct: 307 RTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAG-VRPNEFTYPCLLRTCTYAGEINLGE 365

Query: 351 QLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNG 390
           Q+H   IK       +V+  +I              +L  +  +DVVSW +MI+ +VQ+ 
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              E L    +MQ  G   D++ + + +SA + ++    G+Q H+ +   G   +  + +
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+++YA+ G  K A  +FE  +   +D+ TWN M++G+ Q+GL EEA   F +M +  V
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIE--HKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             NV T  S + A   + +I+ GKQ+H   I+        V  +LI +Y K G I  A  
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKM 603

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++ E+N V++ T+I    QHG    AL LF  MK  G++P+ +TF+ VL+ACS+ GL
Sbjct: 604 QFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGL 663

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V+EGL  F  M  E+ I P  +HY CV D+LGR G++  A +FV+E+    N + +W +L
Sbjct: 664 VEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAM-VWRTL 722

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L +CR+H + E+ E+ AK LLE++  +S    +VLLSN YA  G W   D VRK M++RG
Sbjct: 723 LSACRVHKNIEIGELAAKYLLELEPHDSAS--YVLLSNAYAVTGKWACRDHVRKMMKDRG 780

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +RKE G SWI+V   V+ F   D+ HP +H+IY+ L  L   +   G
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIG 827



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 205/397 (51%), Gaps = 26/397 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D    +  I +YA+ G    AR++F+    R+   W  M+ GY +N    EA+ L+ Q +
Sbjct: 76  DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQ-M 134

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
               +V       S LSA ++    + G+ +HA + K       +V NA+I         
Sbjct: 135 HCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSL 194

Query: 373 ---ER--------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
              ER        D V++NT+IS   Q G  +  L +  EM+  G+  D VT+ +LL+A 
Sbjct: 195 SLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAAC 254

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +++ + + GKQ H+YLL+ G+  +  +E  L+D+Y K G+I  A +IF+   SGDR    
Sbjct: 255 ASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK---SGDRTNVV 311

Query: 481 -WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            WN M+  Y Q   L ++F  F QM+   V PN  T   +L  C   G I LG+Q+H  S
Sbjct: 312 LWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLS 371

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+   + +++V   LIDMYSK G ++ A  +   +  K+ V++T+MI GY QH   + AL
Sbjct: 372 IKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEAL 431

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
             F+ M+  GI PD I   + +SAC+    + +G QI
Sbjct: 432 ETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI 468



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC-NPMGNIELGKQ 534
           R  A+ N  + G+  +   E+    F   +        V  A  L  C   + +  L   
Sbjct: 4   RAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPV 63

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  +I   L ++   G  LID+Y+K G++  A  VF ++  +++V++  M+ GY ++G+
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            E A+ L+  M   G+ P      +VLSAC+ A L ++G
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQG 162


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/727 (31%), Positives = 387/727 (53%), Gaps = 53/727 (7%)

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
           +  +WN++       +LP EA+L+Y+ M +S    S D+ T+   L A A        K 
Sbjct: 38  SAFLWNSLSRALSSASLPTEALLVYNHMLRSG--VSPDDRTFPFALHAAAAAAQAHPAKG 95

Query: 129 VHCHF--IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           +  H   +R       F  N+L+  Y+ C  + DA                   +VFD M
Sbjct: 96  LELHAAALRSGHLADVFAGNTLVAFYAACGHAGDAR------------------RVFDEM 137

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
             R+VV+WN++VS ++  + + +A +    M+R G+  +  S V+V PA     +     
Sbjct: 138 PARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGL 197

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            V+GL++K G + + +L   ++ + MY + G  + + K+F+   ERN   WN+ IG ++ 
Sbjct: 198 GVHGLVLKTGLDSIVNL--GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLN 255

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
                + + LF  + E    +   +T  S L A+ +L   DLG+++H Y IK  + L + 
Sbjct: 256 AGLYGDVLALFRGMSE-RGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIF 314

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V N++++                    R+VVSWN MI+  VQNG + E   LV +MQK G
Sbjct: 315 VANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDG 374

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              +S+T+  LL A S + +   GKQ HA+ +R G+ F+  + + LIDMYAK G ++ A+
Sbjct: 375 ECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQ 434

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            IF   D  ++D  ++N +I GY+Q+    E+   F+Q+    +  + ++    L AC  
Sbjct: 435 SIF---DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTN 491

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           + + + GK++HG  +R LL  + F+  +L+ +Y+K G+++ A+ +F +I EK+  ++  M
Sbjct: 492 LSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNM 551

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I+GYG HG  + A  LF  MK  G+  D ++++AVLS CS+ GLV+ G + F  M  +  
Sbjct: 552 IMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-N 610

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           ++P   HY C+ D+LGR G++ E+ E + ++    N  ++WG+LLG+CR+HG+ ELA+  
Sbjct: 611 LEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANS-DVWGALLGACRIHGNIELAQYA 669

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A  L E+   +S  GY+ +L N+YAE G W    K+R  M+ R ++K    SW+  G  +
Sbjct: 670 ADHLFELKPEHS--GYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKL 727

Query: 766 NRFASKD 772
             F   D
Sbjct: 728 QAFLVGD 734



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 247/476 (51%), Gaps = 25/476 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           +R R+   WN++           EA+  +  MLR G+ P   +F     A ++      A
Sbjct: 34  LRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPA 93

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             +      L S ++ D+F  ++ +  YA  G    AR++FD    R+   WN+++  ++
Sbjct: 94  KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFL 153

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
            N    +A +  + ++    +  +  + +S + A    QE   G  +H  ++K  +   V
Sbjct: 154 ANKMFDDARQALLSMMR-SGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIV 212

Query: 366 IVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            + NA++                    ER+ VSWN+ I  F+  GL  + L L   M ++
Sbjct: 213 NLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSER 272

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
           GFM  S+T+++LL A   L   D+G++ H Y ++  +  +  + + L+DMYAK G ++ A
Sbjct: 273 GFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKA 332

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +FEK +   R+  +WNAMIA   QNG   EAF    +M +    PN +T+ ++LPAC+
Sbjct: 333 CAVFEKIEV--RNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACS 390

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            M +++ GKQ+H +SIR  L  ++F+  +LIDMY+K G +  A ++F  + EK+ V+Y T
Sbjct: 391 RMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNT 449

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           +ILGY Q   S  +L+LF+ +   GIE DAI+F+  L+AC+      +G +I  ++
Sbjct: 450 LILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVL 505



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 295/620 (47%), Gaps = 52/620 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA-ILLYSQMKKSSPYTSCDNYTYS 111
           G    AR++FD +     V WN+++  F+ N +  +A   L S M+   P       +  
Sbjct: 125 GHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVA---SLV 181

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           SV+ AC   +    G  VH   ++   +    + N+L++MY              K+  V
Sbjct: 182 SVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYG-------------KFGHV 228

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           + S      KVF+ M  RN V+WN+ +  ++    Y + +  FR M   G  P +I+  +
Sbjct: 229 EAS-----MKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSS 283

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           + PAL  LG +     V+G  +K   E   D+FVA+S + MYA+ G  + A  +F+    
Sbjct: 284 LLPALVELGYFDLGREVHGYSIKRAMEL--DIFVANSLVDMYAKFGSLEKACAVFEKIEV 341

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN   WN MI   VQN    EA  L ++ ++ D    + +T ++ L A S++  L  G+Q
Sbjct: 342 RNVVSWNAMIANLVQNGAESEAFGLVIK-MQKDGECPNSITLVNLLPACSRMASLKTGKQ 400

Query: 352 LHAYIIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLD 392
           +HA+ I+  +   + + NA+I                   E+D VS+NT+I  + Q+   
Sbjct: 401 IHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDVSYNTLILGYSQSPWS 460

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYL 451
            E L L  ++   G   D+++    L+A +NL +   GK+ H  L+R  + +   + + L
Sbjct: 461 FESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTL 520

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +Y K G++ TA +IF  N   ++D A+WN MI GY  +G ++ AF  F  M +H VT 
Sbjct: 521 LGLYTKGGMLDTASKIF--NRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTY 578

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + V+  +VL  C+  G +E GK+     +   L+        ++D+  +SG +  +  + 
Sbjct: 579 DHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEII 638

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL-SACSYAGL 629
             +P   NS  +  ++     HG  E  L+ + +     ++P+   + +VL +  + AG 
Sbjct: 639 LDMPFHANSDVWGALLGACRIHGNIE--LAQYAADHLFELKPEHSGYYSVLRNMYAEAGR 696

Query: 630 VDEGLQIFDLMQQEYKIQPS 649
            +E  +I  LM+   K+Q +
Sbjct: 697 WNEAHKIRTLMKSR-KVQKN 715



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 8/247 (3%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL--GK 533
           R    WN++    +   L  EA + +  ML   V+P+  T    L A           G 
Sbjct: 37  RSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGL 96

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           +LH  ++R     +VF G +L+  Y+  G    A  VF ++P ++ V++ +++  +  + 
Sbjct: 97  ELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANK 156

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
           M + A     SM   G+  +  + V+V+ AC        GL +  L+ +   +       
Sbjct: 157 MFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKT-GLDSIVNLG 215

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
             + DM G+ G V  + +  + + E   V   W S +G C L  ++ L   V      M 
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEV--SWNSAIG-CFL--NAGLYGDVLALFRGMS 270

Query: 714 TRNSMPG 720
            R  MPG
Sbjct: 271 ERGFMPG 277


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/727 (32%), Positives = 377/727 (51%), Gaps = 49/727 (6%)

Query: 91  LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
            L  +   SSP    + Y Y S+L++C    +   GK +HC  I+  +    F  N LLN
Sbjct: 30  FLAQRTSHSSP--EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            Y                  V Y       K+FD M  RN V++ T++  Y +  R+ EA
Sbjct: 88  FY------------------VKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEA 129

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  F  +   G   +   F  V   L S    K    V+  + KLG  + +D FV ++ I
Sbjct: 130 IGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLG--FDSDAFVGTALI 187

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
             Y+  G  + AR++FD    ++   W  M+  YV+N    E+++LF + + +     ++
Sbjct: 188 DCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSR-MRIVGFKPNN 246

Query: 331 VTFLSALSAVSQLQELDLGQQLH------AYIIKNFVALPVI--------------VLNA 370
            TF S L A   L+  ++G+ +H      +Y+ + FV + +I              V   
Sbjct: 247 FTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEE 306

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           + + DV+ W+ MI+ + Q+   +E + +   M++   + +  T+ +LL A ++L +  +G
Sbjct: 307 MPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLG 366

Query: 431 KQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            Q H ++++ G+      S  L+DMYAK G ++ + Q+F  ++S +    +WN +I GY 
Sbjct: 367 NQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLF--SESPNCTDVSWNTVIVGYV 424

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           Q G  E+A + F+ MLE  V    VT +SVL AC  +  +E G Q+H  S++ + D+N  
Sbjct: 425 QAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTV 484

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           VG +LIDMY+K G I  A  VF  + E + V++  MI GY  HG+   AL  F SM    
Sbjct: 485 VGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETE 544

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
            +PD +TFV +LSACS AGL+D G   F  M +EY I+P  EHY C+  +LGR G + +A
Sbjct: 545 CKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKA 604

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            + V E+  E +V+ +W +LL +C +H   EL  + A+++LE++  +     HVLLSNIY
Sbjct: 605 AKLVHEIPFEPSVM-VWRALLSACVIHNDVELGRISAQRVLEIEPEDE--ATHVLLSNIY 661

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A    W NV  +R  M+ +G+RKE G SWI+  G V+ F+  D  HP +  I  MLE L 
Sbjct: 662 ANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLN 721

Query: 790 MEMRNAG 796
           M+ RN G
Sbjct: 722 MKARNEG 728



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 235/507 (46%), Gaps = 89/507 (17%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTSCDNYTY 110
           G    ARQ+FD+I     V W  ++  +V N    E++ L+S+M+     P    +N+T+
Sbjct: 194 GYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKP----NNFTF 249

Query: 111 SSVLKACAETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +SVLKAC       +GKAVH C F   +     FV   L+++Y             +K  
Sbjct: 250 ASVLKACVGLEVFNVGKAVHGCAFKTSYLE-ELFVGVELIDLY-------------IKSG 295

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +VD +      +VF+ M + +V+ W+ +++ Y ++E+  EA+  F  M R  + P+  + 
Sbjct: 296 DVDDA-----LQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTL 350

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++  A +SL D +  + ++  +VK+G +   ++FV+++ + MYA+ G  + + ++F   
Sbjct: 351 ASLLQACASLVDLQLGNQIHCHVVKVGLDM--NVFVSNALMDMYAKCGRMENSLQLFSES 408

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
                  WNT+I GYVQ  +  +A+ LF  +LE  ++   +VT+ S L A + +  L+ G
Sbjct: 409 PNCTDVSWNTVIVGYVQAGNGEKALILFKDMLEC-QVQGTEVTYSSVLRACAGIAALEPG 467

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
            Q+H+  +K       +V NA+I                    E D VSWN MIS +  +
Sbjct: 468 SQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVH 527

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           GL  E L     M +     D VT   +LSA SN    D G+           +F+ M E
Sbjct: 528 GLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQA----------YFKSMVE 577

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            Y I+  A+                       +  M+    ++G L++A       L H 
Sbjct: 578 EYDIEPCAEH----------------------YTCMVWLLGRSGHLDKA-----AKLVHE 610

Query: 509 V--TPNVVTIASVLPACNPMGNIELGK 533
           +   P+V+   ++L AC    ++ELG+
Sbjct: 611 IPFEPSVMVWRALLSACVIHNDVELGR 637


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/773 (30%), Positives = 402/773 (52%), Gaps = 57/773 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    A ++F  +     V WN +I G+V      EA+LL+ +MKK+    + ++ T
Sbjct: 106 CKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAG--LTPNSRT 163

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             ++L AC E   LR+G+ +H + +R          N L +M +   ++L    VG    
Sbjct: 164 VVALLLACGEMLELRLGQEIHGYCLR----------NGLFDMDAYVGTAL----VGF--- 206

Query: 170 EVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
              Y ++D V   +VF  M  RN+V+WN I++ ++      +A++ +  ML  GI+   +
Sbjct: 207 ---YMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAV 263

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + + V  A +  G  +    ++ L +K     +NDLF+ ++ + MY++ G  + +  +F+
Sbjct: 264 TMLVVIQACAEYGCLRLGMQLHQLAIKF--NLINDLFILNALLNMYSDNGSLESSWALFN 321

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                +  +WN+MI  Y+      EAI LF++ + L+ I  D  T    LS  + L +  
Sbjct: 322 AVPTSDAALWNSMISSYIGFGFHAEAIALFIK-MRLERIKEDVRTIAIMLSLCNDLNDGS 380

Query: 348 L-GQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAF 386
           + G+ LHA+ +K+ + L   + NA++                      DV+SWNTMISAF
Sbjct: 381 IWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF 440

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            Q+    +   L   M +     +S T+ +LL+   +  +   G+  H + +++G+    
Sbjct: 441 AQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINT 500

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L +MY   G  + A  +F +     RD  +WN++I+ Y +N    +A + F  M+
Sbjct: 501 SLNTSLTEMYINCGDERAATNMFTR--CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGV 563
              + PN VTI ++L +C  + ++ LG+ LH ++ R    L+ +  +  + I MY++ G 
Sbjct: 559 SE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + YA  +F  +  ++ V++  MI GYG HG    A   F  M   G +P+ ++F +VLSA
Sbjct: 618 LQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSA 677

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS++GL   GLQ+F  M +++ I P   HY C+ D+LGR G   EA  F+  +  E +  
Sbjct: 678 CSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDA- 736

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            IW +LL SC++  +++L E +  KL+E++  N  PG  +LLSNIYA  G W  V ++RK
Sbjct: 737 SIWRALLSSCQIKSNNKLLETIFGKLVELEPSN--PGNFILLSNIYAAAGLWSEVVQIRK 794

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +RERGL K  G SWI +G  V+ F + D  HPQS +IYE L  L   +R+ G
Sbjct: 795 WLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 220/453 (48%), Gaps = 27/453 (5%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WN+I+  + K +     +  +  M  +GI P + +   V  A   L    +   ++  + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCI- 86

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
             G + +ND+ V ++ +  Y + G    A K+F    ER+   WN +I GYV      EA
Sbjct: 87  -RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEA 145

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVI 366
           + LFV+ ++   +  +  T ++ L A  ++ EL LGQ++H Y ++N       +V   ++
Sbjct: 146 VLLFVE-MKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        V + ++ R++VSWN +I+ F+  G   + L L   M  +G   D+VT
Sbjct: 205 GFYMRFDAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVT 264

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           +  ++ A +      +G Q H   ++   I+   + + L++MY+ +G ++++  +F  N 
Sbjct: 265 MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALF--NA 322

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL- 531
               D A WN+MI+ Y   G   EA   F +M    +  +V TIA +L  CN + +  + 
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW 382

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+ LH  +++  ++ + ++G +L+ MY K   I  A  VF K+   + +++ TMI  + Q
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ 442

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                +A  LF  M    I+ ++ T V++L+ C
Sbjct: 443 SMFRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/422 (22%), Positives = 175/422 (41%), Gaps = 35/422 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   +  +   A+ +F+ +     + WNT+I  F  +    +A  L+  M +S      
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESE--IKF 463

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           ++YT  S+L  C +  +L  G+++H   I+     +  +  SL  MY  C     A    
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAAT--- 520

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                           +F    +R++V+WN+++S Y+K +   +A+  F  M+   + P+
Sbjct: 521 ---------------NMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPN 564

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +++ +N+  + + L        ++    +       D  +A++ I MYA  G   +A KI
Sbjct: 565 SVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKI 624

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   WN MI GY  +    +A   F Q+L+ D    ++V+F S LSA S    
Sbjct: 625 FCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLD-DGFKPNNVSFASVLSACSHSGL 683

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
              G QL   ++++F   P           +  +  M+    + G   E +  +  M  +
Sbjct: 684 TVTGLQLFHSMVRDFGIAP----------QLTHYGCMVDLLGRGGHFSEAIAFINSMPIE 733

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
               D+    ALLS+     N  + +     L+       G    L ++YA +GL     
Sbjct: 734 P---DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVV 790

Query: 466 QI 467
           QI
Sbjct: 791 QI 792



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 7/167 (4%)

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL  T  Q    N S D     WN++I  +T+          + QM    +TP+  T+  
Sbjct: 11  GLSSTPEQTHLVNVSKD-----WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPL 65

Query: 519 VLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           VL AC  +  I  G ++H   IR L L  +V VGT+L+D Y K G++  A+ VF ++PE+
Sbjct: 66  VLKACGRLNAIGNGVRIHS-CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER 124

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + V++  +I GY      + A+ LF  MK  G+ P++ T VA+L AC
Sbjct: 125 DLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLAC 171


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/596 (35%), Positives = 346/596 (58%), Gaps = 30/596 (5%)

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP   ++     A S L D +   +++   +  G    ++LFV S+ + +Y +    + 
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDG--VASNLFVGSAIVDLYFKFTRAEL 166

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           ARK+FD   ER+T +WNTMI G+ +N++  ++I +FV +L++  + FD  T  + L+AV+
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG-LSFDSTTLATVLTAVA 225

Query: 342 QLQELDLG---------QQLHA--YIIKNFVAL---------PVIVLNAVIERDVVSWNT 381
           +LQE  LG         + LH+  Y++   ++L           I+ + + + D++S+N 
Sbjct: 226 ELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNA 285

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MIS +  N   +  + L  E+   G  ++S T+  L+       +  + +      L+ G
Sbjct: 286 MISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIG 345

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           I  +  + + L  +Y +   ++ ARQ+F+  +S ++  A+WNAMI+GYTQNGL + A   
Sbjct: 346 IILQPSVSTALTTVYCRLNEVQFARQLFD--ESPEKSLASWNAMISGYTQNGLTDRAISL 403

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F++M+   ++PN VT+ S+L AC  +G + +GK +HG      L+ NV+V T+L+DMY+K
Sbjct: 404 FQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAK 462

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G I  A  +F  + +KN VT+  MI GYG HG  + AL LF  M   GI P  +TF+++
Sbjct: 463 CGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSI 522

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L ACS++GLV EG +IF  M   Y  QP +EHY C+ D+LGR G++  A EF++ +  E 
Sbjct: 523 LYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEP 582

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
               +WG+LLG+C +H ++E+A V +K+L ++D  N   GY+VLLSNIY+ + N+     
Sbjct: 583 GP-AVWGALLGACMIHKNTEMANVASKRLFQLDPENV--GYYVLLSNIYSTDRNFPKAAS 639

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           VR+ +++R L K  GC+ I++      F S D+ HPQ+  I+EMLE+L  +MR AG
Sbjct: 640 VRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 258/544 (47%), Gaps = 57/544 (10%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           RQLF+ +++P   ++N +I GF  N LP  +I LY+ ++K +     DN+TY+  + A +
Sbjct: 66  RQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRP-DNFTYAFAISAAS 124

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
              + R+G  +H H I      + FV ++++++Y                    +++ +L
Sbjct: 125 RLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLY------------------FKFTRAEL 166

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD M  R+ V WNT++S + +   + +++R F  ML +G+   + +   V  A++ 
Sbjct: 167 ARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAE 226

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L +Y+    +  L  K G    +D++V +  I +Y++ G     R +FD   + +   +N
Sbjct: 227 LQEYRLGMGIQCLASKKGLH--SDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYN 284

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  N+    A+ LF ++L   + V +  T +  +        L L + +    +K
Sbjct: 285 AMISGYTFNHETESAVTLFRELLASGQRV-NSSTLVGLIPVYLPFNHLQLSRLIQNLSLK 343

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
             + L   V  A+                     E+ + SWN MIS + QNGL D  + L
Sbjct: 344 IGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISL 403

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES------YLI 452
             EM  Q    + VTVT++LSA + L    +GK  H       I  E +ES       L+
Sbjct: 404 FQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGL-----IKSERLESNVYVSTALV 457

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G I  ARQ+F+     D++  TWNAMI GY  +G  +EA   F +ML+  + P 
Sbjct: 458 DMYAKCGSIVEARQLFDL--MVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPT 515

Query: 513 VVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  S+L AC+  G +  G ++ H  +  Y           ++D+  ++G +  A    
Sbjct: 516 GVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFI 575

Query: 572 AKIP 575
            ++P
Sbjct: 576 ERMP 579



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 223/477 (46%), Gaps = 51/477 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R  LAR++FD +    TV+WNT+I GF  N+   ++I ++  M       S D+ T ++V
Sbjct: 163 RAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG--LSFDSTTLATV 220

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L A AE +  R+G  + C   +   +   +V   L+++YS C  S    +          
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRI---------- 270

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +FD + + +++++N ++S Y        AV  FR +L  G R ++ + V + 
Sbjct: 271 --------LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLI 322

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P        + + ++  L +K+G   +    V+++   +Y  L    FAR++FD   E++
Sbjct: 323 PVYLPFNHLQLSRLIQNLSLKIG--IILQPSVSTALTTVYCRLNEVQFARQLFDESPEKS 380

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI GY QN     AI LF +++   ++  + VT  S LSA +QL  L +G+ +H
Sbjct: 381 LASWNAMISGYTQNGLTDRAISLFQEMMP--QLSPNPVTVTSILSACAQLGALSIGKWVH 438

Query: 354 AYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
             I         +V+  ++              + + +++++VV+WN MI+ +  +G   
Sbjct: 439 GLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGK 498

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGMESY-- 450
           E L L YEM + G     VT  ++L A S+      G +  H+    +G  F+ M  +  
Sbjct: 499 EALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYG--FQPMSEHYA 556

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++D+  ++G +  A +  E+    +   A W A++     +   E A VA +++ +
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPL-EPGPAVWGALLGACMIHKNTEMANVASKRLFQ 612



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 105/215 (48%), Gaps = 22/215 (10%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           I +LS  I  +  P++ + L+ + C+      ARQLFD     +   WN +I G+  N L
Sbjct: 337 IQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGL 396

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
              AI L+ +M    P  S +  T +S+L ACA+   L IGK VH          + +V 
Sbjct: 397 TDRAISLFQEMM---PQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS 453

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            +L++MY+ C S ++A                   ++FD M  +NVV WN +++ Y    
Sbjct: 454 TALVDMYAKCGSIVEAR------------------QLFDLMVDKNVVTWNAMITGYGLHG 495

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
              EA++ F  ML+ GI P+ ++F+++  A S  G
Sbjct: 496 HGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSG 530



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q  A L+ HGIH++    + L   +   G +   RQ+F  N     D   +N +I G++ 
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLF--NKVSKPDLFLFNVLIRGFSD 89

Query: 491 NGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           NGL + +   +  + +  N+ P+  T A  + A + + +  +G  LH  SI   +  N+F
Sbjct: 90  NGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLF 149

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           VG++++D+Y K      A  VF  +PE+++V + TMI G+ ++   E ++ +F  M   G
Sbjct: 150 VGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVG 209

Query: 610 IEPDAITFVAVLSACS 625
           +  D+ T   VL+A +
Sbjct: 210 LSFDSTTLATVLTAVA 225


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 255/853 (29%), Positives = 416/853 (48%), Gaps = 98/853 (11%)

Query: 12  PPPPTATPPPPQLPQIHS-----------LSPPIPKLKTPTIRSRLSKIC---------- 50
           P      PP P LP I S           L     + +     S+    C          
Sbjct: 6   PVATFKVPPRPLLPSIKSNVTSFRFLHSHLRNKQLEFQNHGFSSQFIFRCSACSKFLVSQ 65

Query: 51  -QEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNY 108
            +  R   A+QLFD+      + W+ +I  +  C N   +A  L+ +M         + +
Sbjct: 66  SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFA-QAFGLFQKMMGEGLQP--NGF 122

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           + +S+LK    T  + + + +H   IR        +  + + MYS C    DA+      
Sbjct: 123 SLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQ------ 176

Query: 169 VEVDYSKYDLVCKVFD--TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPS 225
                       +VFD  ++   +++ WN+I++ Y+    +VE +R F  M+ +G+  P+
Sbjct: 177 ------------RVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPT 224

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +++ +V  A  S G+ K   +V+G ++K G E  N   + +S +  Y + G    A ++
Sbjct: 225 ELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN---LWNSLVTFYGKCGNLQHASQL 281

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF-DDVTFLSALSAVSQLQ 344
           F+    ++   WN MI    Q      A+ LF ++L+++  V  + VTFLS LSAVS L 
Sbjct: 282 FERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLS 341

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
            L  G+++HA+I +  + +   + N++I                     RD++SWN+M++
Sbjct: 342 ALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLA 401

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV----GKQTHAYLLRH 440
            + QN        +   M   G   DS ++T + +AAS   +  +    GK+ H Y+LR 
Sbjct: 402 GYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR 461

Query: 441 ----GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
               G+    + + ++ MYAK   I  A +IF+     +RD  +WNAM+ GY++N   E+
Sbjct: 462 ITPGGVSLS-VSNAILKMYAKFNRIADAEKIFKGMK--NRDSYSWNAMMDGYSRNAKFED 518

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-------VF 549
             + F  +L+     + V+++ +L +C  + +++LGKQ H    +    Q+       + 
Sbjct: 519 VLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLS 578

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +  +LI MYSK G I  AA VF K+  K+  ++T MI G   HG++  AL LF  MK  G
Sbjct: 579 INNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG 638

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           I+P+ +TF+A+L AC++ GLV EG   FD M  +Y + PS EHY C+ D+ GR G+   A
Sbjct: 639 IKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRA 698

Query: 670 YEFVKELG------EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
              V E G         ++L +W  LLG+C      +L    A K+LE++  +     ++
Sbjct: 699 KSLV-EFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEAT--YI 755

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LL+N+YA  G WE+  KVRK MR++GLRKEVGCSWID G   + F + D  HPQ  +IYE
Sbjct: 756 LLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYE 815

Query: 784 MLERLAMEMRNAG 796
            L +L    R  G
Sbjct: 816 KLAQLNYSCRRMG 828


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/729 (31%), Positives = 390/729 (53%), Gaps = 52/729 (7%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S +  TY ++L+ C   R    G  VH +  +  +     + N+LL+M+           
Sbjct: 91  SVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMF----------- 139

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
             +++ ++  + Y     VF  M  R++ +WN +V  Y K   + EA+  +  ML +GIR
Sbjct: 140 --VRFGDLVEAWY-----VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   +F  V      L D      V+  +++ G E  +D+ V ++ I MY + G    AR
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFE--SDVDVVNALITMYVKCGDIFSAR 250

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD    R+   WN MI GY +N+  +E + LF  + E   +  D +T  S +SA   L
Sbjct: 251 LVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDLMTMTSVISACEAL 309

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
            +  LG+++H Y+IK      V V N++I+                    +D+VSW  MI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI- 442
           S + +NGL ++ +     M+ +G + D +T+ ++LSA + L   D G   H +  R G+ 
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + + LIDMY+K   I  A ++F +    +++  +W ++I G   N    EA   F+
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHR--IPNKNVISWTSIILGLRLNYRSFEALFFFQ 487

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           QM+  ++ PN VT+ SVL AC  +G +  GK++H  ++R  L  + F+  +L+DMY + G
Sbjct: 488 QMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCG 546

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A N F    EK+  ++  ++ GY Q G    A+ LF  M    + PD ITF ++L 
Sbjct: 547 RMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLC 605

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS +G+V +GL+ F+ M+ ++ I P+ +HY  V D+LGR G++ +AYEF+K++  + + 
Sbjct: 606 ACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDP 665

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LL +CR++ + EL E+ A+ + EMDT++   GY++LL N+YA+ G W+ V +VR
Sbjct: 666 -AIWGALLNACRIYQNVELGELAAQHIFEMDTKSV--GYYILLCNLYADSGKWDEVARVR 722

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG---NKT 799
           K MRE  L  + GCSW++V G V+ F + D  HPQ  +I  +LE    +M   G   +K 
Sbjct: 723 KIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKD 782

Query: 800 IQNSNVDAT 808
            +  ++DA+
Sbjct: 783 SRRDDIDAS 791



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
           ++  ++ T+++ L      +    G ++H+Y+ K    L V + NA++            
Sbjct: 89  QVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEA 148

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                   ERD+ SWN ++  + + G  DE L L + M   G   D  T   +L     L
Sbjct: 149 WYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGL 208

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   G++ H +++R+G   +  + + LI MY K G I +AR +F++     RD+ +WNA
Sbjct: 209 PDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPR--RDRISWNA 266

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MI+GY +N +  E    F  M E  V P+++T+ SV+ AC  +G+  LG+++HG+ I+  
Sbjct: 267 MISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTG 326

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
               V V  SLI M+S  G  + A  VF+K+  K+ V++T MI GY ++G+ E+A+  + 
Sbjct: 327 FVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DM 659
            M+  G+ PD IT  +VLSAC+  GL+D+G     +M  E+  +     Y  VA    DM
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDM 441

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             +   + +A E    +  + NV+  W S++   RL+  S
Sbjct: 442 YSKCRCIDKALEVFHRIPNK-NVIS-WTSIILGLRLNYRS 479



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 243/545 (44%), Gaps = 83/545 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD + R   + WN +I G+  N++  E + L+  M++   +   D  T +SV+ AC
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF--FVDPDLMTMTSVISAC 306

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               + R+G+ VH + I+        V NSL+ M+S+     +AEM              
Sbjct: 307 EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEM-------------- 352

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +++V+W  ++S Y K     +AV  + +M   G+ P  I+  +V  A +
Sbjct: 353 ----VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACA 408

Query: 238 SLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            LG      +++    + G + YV    VA+S I MY++  C D A ++F     +N   
Sbjct: 409 GLGLLDKGIMLHEFADRTGLTSYV---IVANSLIDMYSKCRCIDKALEVFHRIPNKNVIS 465

Query: 297 WNTMIGGYVQNNHPVEAIELFVQ-VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           W ++I G   N    EA+  F Q +L L     + VT +S LSA +++  L  G+++HA+
Sbjct: 466 WTSIILGLRLNYRSFEALFFFQQMILSLKP---NSVTLVSVLSACARIGALSCGKEIHAH 522

Query: 356 IIKNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLDDEGL 396
            ++  +     + NA++                   E+DV SWN +++ + Q G     +
Sbjct: 523 ALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAV 582

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L ++M +     D +T T+LL A S                R G+  +G+E Y   M  
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACS----------------RSGMVTDGLE-YFESMEH 625

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K  +    +               + +++    + G LE+A+   ++M    + P+    
Sbjct: 626 KFHIAPNLKH--------------YASVVDLLGRAGRLEDAYEFIKKM---PIDPDPAIW 668

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC    N+ELG +L    I  +  ++V     L ++Y+ SG  +  A V  KI  
Sbjct: 669 GALLNACRIYQNVELG-ELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARV-RKIMR 726

Query: 577 KNSVT 581
           +N +T
Sbjct: 727 ENRLT 731



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 128/253 (50%), Gaps = 9/253 (3%)

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY--- 436
           N++I      G  ++ L+ +  MQ+    ++  T  ALL      R    G + H+Y   
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 437 -LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            + R G+    + + L+ M+ + G +  A  +F K    +RD  +WN ++ GY + G  +
Sbjct: 123 TVTRLGVR---LGNALLSMFVRFGDLVEAWYVFGK--MAERDLFSWNVLVGGYAKAGYFD 177

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           EA   + +ML   + P+V T   VL  C  + ++  G+++H   IRY  + +V V  +LI
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MY K G I  A  VF ++P ++ +++  MI GY ++ +    L LF  M+   ++PD +
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLM 297

Query: 616 TFVAVLSACSYAG 628
           T  +V+SAC   G
Sbjct: 298 TMTSVISACEALG 310



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 2/150 (1%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N++I      G LE+A +    M E  V+    T  ++L  C        G ++H +  +
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
            +    V +G +L+ M+ + G +  A  VF K+ E++  ++  ++ GY + G  + AL+L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           +  M   GI PD  TF  VL  C   GL D
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTC--GGLPD 210


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/659 (33%), Positives = 354/659 (53%), Gaps = 33/659 (5%)

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
           SS  +++V    V V++         F  +  + ++AWN I+   V    + +A+  +  
Sbjct: 67  SSFASQLVN---VYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHS 123

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           ML+ G+ P   ++  V  A SSL   +    V+     +  +   +++V  + I M+A+ 
Sbjct: 124 MLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE---TMHGKTKANVYVQCAVIDMFAKC 180

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + AR++F+   +R+   W  +I G + N   +EA+ LF + +  + ++ D V   S 
Sbjct: 181 GSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRK-MRSEGLMPDSVIVASI 239

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDV 376
           L A  +L+ + LG  L    +++     + V NAVI+                     DV
Sbjct: 240 LPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDV 299

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSW+T+I+ + QN L  E   L   M   G   +++  T++L A   L     GK+ H +
Sbjct: 300 VSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNF 359

Query: 437 LLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           +L+ G+  + +  S LI MYA  G IK A  IFE   + D+D   WN+MI GY   G  E
Sbjct: 360 VLKEGLMSDVVVGSALIVMYANCGSIKEAESIFEC--TSDKDIMVWNSMIVGYNLVGDFE 417

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
            AF  FR++      PN +T+ S+LP C  MG +  GK++HG+  +  L  NV VG SLI
Sbjct: 418 SAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLI 477

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMYSK G +     VF ++  +N  TY TMI   G HG  E+ L+ +  MK  G  P+ +
Sbjct: 478 DMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKV 537

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+++LSACS+AGL+D G  +++ M  +Y I+P+ EHY C+ D++GR G +  AY+F+  
Sbjct: 538 TFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITR 597

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +    +   ++GSLLG+CRLH   EL E++A+++L++   +S  G++VLLSN+YA    W
Sbjct: 598 MPMTPDA-NVFGSLLGACRLHNKVELTELLAERILQLKADDS--GHYVLLSNLYASGKRW 654

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           E++ KVR  ++++GL K+ G SWI VG  +  F +    HP   KI E L  L + M++
Sbjct: 655 EDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKS 713



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/536 (23%), Positives = 254/536 (47%), Gaps = 48/536 (8%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F ++     + WN I+ G V      +AI  Y  M +     + DNYTY  VLKAC+   
Sbjct: 90  FRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHG--VTPDNYTYPLVLKACSSLH 147

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            L++G+ VH   +   +  + +V  ++++M++ C S  DA                   +
Sbjct: 148 ALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDAR------------------R 188

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F+ M  R++ +W  ++   +     +EA+  FR M   G+ P ++   ++ PA   L  
Sbjct: 189 MFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEA 248

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            K    +    V+ G E  +DL+V+++ I MY + G    A ++F + +  +   W+T+I
Sbjct: 249 VKLGMALQVCAVRSGFE--SDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLI 306

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY QN    E+ +L++ ++ +  +  + +   S L A+ +L+ L  G+++H +++K  +
Sbjct: 307 AGYSQNCLYQESYKLYIGMINVG-LATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGL 365

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              V+V +A+I                    ++D++ WN+MI  +   G  +        
Sbjct: 366 MSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRR 425

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           +       + +TV ++L   + +     GK+ H Y+ + G+     + + LIDMY+K G 
Sbjct: 426 IWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGF 485

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           ++   ++F++     R+  T+N MI+    +G  E+    + QM E    PN VT  S+L
Sbjct: 486 LELGEKVFKQMMV--RNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLL 543

Query: 521 PACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            AC+  G ++ G  L+   I  Y ++ N+   + ++D+  ++G ++ A     ++P
Sbjct: 544 SACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMP 599



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 207/436 (47%), Gaps = 47/436 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ +       W  +I G + N    EA+LL+ +M+        D+   +S+L AC
Sbjct: 186 ARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMP--DSVIVASILPAC 243

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                +++G A+    +R       +V N++++MY  C   L+A                
Sbjct: 244 GRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAH--------------- 288

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  M   +VV+W+T+++ Y +   Y E+ + +  M+ +G+  + I   +V PAL 
Sbjct: 289 ---RVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALG 345

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   K    ++  ++K G   ++D+ V S+ I MYA  G    A  IF+   +++  VW
Sbjct: 346 KLELLKQGKEMHNFVLKEG--LMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVW 403

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+MI GY        A   F ++   +    + +T +S L   +Q+  L  G+++H Y+ 
Sbjct: 404 NSMIVGYNLVGDFESAFFTFRRIWGAEHRP-NFITVVSILPICTQMGALRQGKEIHGYVT 462

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+ + L V V N++I+                    R+V ++NTMISA   +G  ++GL 
Sbjct: 463 KSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLA 522

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDM 454
              +M+++G   + VT  +LLSA S+    D G   +  ++  +GI    ME Y  ++D+
Sbjct: 523 FYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIE-PNMEHYSCMVDL 581

Query: 455 YAKSGLIKTARQIFEK 470
             ++G +  A +   +
Sbjct: 582 IGRAGDLDGAYKFITR 597



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 23/315 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G P  A ++F  +     V W+T+I G+  N L  E+  LY  M      T  +   
Sbjct: 279 CKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLAT--NAIV 336

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +SVL A  +   L+ GK +H   ++        V ++L+ MY+ C S  +AE       
Sbjct: 337 ATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAE------- 389

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +F+    ++++ WN+++  Y     +  A   FR +     RP+ I+ 
Sbjct: 390 -----------SIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITV 438

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++ P  + +G  +    ++G + K G     ++ V +S I MY++ G  +   K+F   
Sbjct: 439 VSILPICTQMGALRQGKEIHGYVTKSGLGL--NVSVGNSLIDMYSKCGFLELGEKVFKQM 496

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           + RN   +NTMI     +    + +  + Q+ E +    + VTF+S LSA S    LD G
Sbjct: 497 MVRNVTTYNTMISACGSHGQGEKGLAFYEQMKE-EGNRPNKVTFISLLSACSHAGLLDRG 555

Query: 350 QQLHAYIIKNFVALP 364
             L+  +I ++   P
Sbjct: 556 WLLYNSMINDYGIEP 570


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/743 (30%), Positives = 391/743 (52%), Gaps = 75/743 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           D++      K+ A  R+L   +++H   +R       +  V N+LL  Y+ C   L A +
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARC-GDLTAAL 116

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             +F+ M  R+ V +N++++      R++ A+   R ML  G  
Sbjct: 117 A-----------------LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHP 159

Query: 224 PSTISFVNVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            S+ + V+V  A S L  D +     +   +K G    ++ F  ++ + MYA LG  D A
Sbjct: 160 LSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 219

Query: 283 RKIFDNCLERNTE-----VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
           + +F +    ++       WNTM+   VQ+    EAIE+   ++    +  D +TF SAL
Sbjct: 220 QMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARG-VRPDGITFASAL 278

Query: 338 SAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAVIERDVVS------------ 378
            A SQL+ L LG+++HAY++K+       FVA  ++ + A  ER  V+            
Sbjct: 279 PACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHR 338

Query: 379 ----WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT- 433
               WN M+  + Q G+D+E L L   M+ +  ++ S T  A +  A        GK+  
Sbjct: 339 QLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAV 398

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y+L+ G+     +++ L+D+YA+ G ++ AR IF   +   RD  +WN +I G    G
Sbjct: 399 HGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEP--RDVVSWNTLITGCVVQG 456

Query: 493 LLEEAFVAFRQML------------------EHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            + +AF   R+M                   E  V PN VT+ ++LP C  +     GK+
Sbjct: 457 HIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKE 516

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +HG+++R+ LD ++ VG++L+DMY+K G +  +  VF ++P++N +T+  +I+ YG HG+
Sbjct: 517 IHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGL 576

Query: 595 SERALSLF-RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            + A++LF R +     +P+ +TF+A L+ACS++G+VD G+++F  M++ + +QP+ + +
Sbjct: 577 GDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLH 636

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C  D+LGR G++ EAY  +  +      +  W S LG+CRLH +  L E+ A++L +++
Sbjct: 637 ACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLE 696

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
              +   ++VLL NIY+  G WE   +VR  MR+RG+ KE GCSWI++ G ++RF + + 
Sbjct: 697 PDEA--SHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGES 754

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP+S  ++  ++ L   MRN G
Sbjct: 755 AHPESTLVHAHMDALWERMRNQG 777



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 41/337 (12%)

Query: 54  RPHLARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           R  +AR++FD +        +WN ++ G+    +  EA+ L+++M+  +     +  T +
Sbjct: 322 RVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSET-TIA 380

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            VL ACA +      +AVH + ++     + FV N+L+++Y+             +  ++
Sbjct: 381 GVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYA-------------RLGDM 427

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG---------- 221
           + +++     +F  +  R+VV+WNT+++  V      +A +  R M + G          
Sbjct: 428 EAARW-----IFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDG 482

Query: 222 --------IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
                   + P+ ++ + + P  + L        ++G  ++   +  +D+ V S+ + MY
Sbjct: 483 IAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALD--SDIAVGSALVDMY 540

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A+ GC   +R +FD   +RN   WN +I  Y  +    EAI LF +++  +E   ++VTF
Sbjct: 541 AKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTF 600

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
           ++AL+A S    +D G +L   + +N    P   L+A
Sbjct: 601 IAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHA 637



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 119/291 (40%), Gaps = 44/291 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC------------ 105
           AR +F +I     V WNT+I G V     ++A  L  +M++   +T              
Sbjct: 430 ARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEE 489

Query: 106 ----DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               +N T  ++L  CA       GK +H + +R   +    V ++L++MY+ C      
Sbjct: 490 PVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKC------ 543

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRM 220
                           L   VFD + +RNV+ WN ++  Y       EA+  F RM++  
Sbjct: 544 ------------GCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSN 591

Query: 221 GIRPSTISFVNVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             +P+ ++F+    A S  G   +  ++ + +    G +   DL   + A+ +    G  
Sbjct: 592 EAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLH--ACAVDILGRAGRL 649

Query: 280 DFARKIFDNCL--ERNTEVWNTMIGG-YVQNNHPVE--AIELFVQVLELDE 325
           D A  I  +    E+    W++ +G   +  N P+   A E   Q LE DE
Sbjct: 650 DEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQ-LEPDE 699


>gi|387965715|gb|AFK13844.1| cyclin domain/pentatricopeptide repeat-containing protein [Beta
           vulgaris subsp. vulgaris]
          Length = 877

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/824 (29%), Positives = 411/824 (49%), Gaps = 88/824 (10%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQEGRP-HLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           +HSL   +  +   ++   L  +  +G+     ++L   + +  TV+WN ++ G   + +
Sbjct: 65  LHSLVVKLGHISCLSVSKGLLNVYAKGKDFDDCKKLLYQMPKYDTVVWNIVLSGLSGSQV 124

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
               ++       +   T     + + VL  CA  R L  G+++HC+ ++        V 
Sbjct: 125 HDGEVMRLVYDMHTCKETELSPVSIAIVLPVCARLRVLNAGRSLHCYAVKSGWASETLVG 184

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSL++MY+ C         GL Y       Y+  C++ D    ++V++WN +++ +++  
Sbjct: 185 NSLVSMYAKC---------GLVYD----GAYESFCEIND----KDVISWNALMAGFIENG 227

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL-GD--YKSADVVYGLLVKLGSEYVND 262
            Y +A   FR ML   + P+  +  ++ P  + L GD  Y     ++   +K  S+   D
Sbjct: 228 FYNDAWVFFRRMLLGPVAPNYATLTSILPVCAMLDGDDAYSLGKELHAYALK-HSDLQKD 286

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +F+ ++ +  Y  +G  + A  +FD    R+   WN +IGGY  NN   +A+ LF  ++ 
Sbjct: 287 VFIVNALMSFYLRMGVVEGAEALFDGMASRDLVSWNVLIGGYASNNEYSKAVHLFQNLVS 346

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-----VLNAVI----- 372
              +    VT +S L A + LQ L + +Q+H +I +     P +     V NA+I     
Sbjct: 347 SQTLEPGSVTLISVLPACAHLQNLWMVKQIHGFISQ----CPTLYDDTAVSNALISSYAK 402

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                          +RD++SWN+++ AF + G + + L L+Y+M ++    DS+T+  L
Sbjct: 403 CNDLDSSFRTFIISSQRDLISWNSLLDAFAERGCELQLLNLLYQMSEERVGPDSITILTL 462

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGME----SYLIDMYAKSGLIKTARQIFE---- 469
           +    ++      K+ H YLLR  +     +    + L+D YAK G +  A +I++    
Sbjct: 463 IQFYGSISKLSKIKEAHGYLLRACLCQNDTQPTLGNALLDAYAKCGCVNYANKIYKIKLG 522

Query: 470 ----KNDS---------------------GDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               K +S                         + T+N MI  Y +N  LE+A      +
Sbjct: 523 EGKLKWNSEIPGYINWNIQAGECKALEGISQTHRTTFNLMIRAYVENNCLEQAVALLFDL 582

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
                 P+ +TI S+LP C  M +  L +Q HG+ +R  ++     GT +ID+YSK G +
Sbjct: 583 QVQGAKPDAMTIMSILPICVKMASAYLLRQCHGYMVRACIEDIQLKGT-MIDIYSKCGYL 641

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + A  +F     K+ V +T +I GY  HGM + AL LF+ M   G+ PD +   A+LSAC
Sbjct: 642 SLANKLFWSSTHKDLVMFTALIGGYAMHGMGKEALVLFKHMLVLGLRPDHVVLTAILSAC 701

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S+AGLVDEGL+ FD +++ Y ++P+ E Y CV D+L R GK+ +AY FV E+  + N   
Sbjct: 702 SHAGLVDEGLKFFDSIERVYGMKPTMEQYGCVVDLLARRGKIKDAYTFVTEMPVKVNS-N 760

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW  LLG+CR +   EL+++VA +LL   + +S  G +V +SN++A E  W+NV ++RK 
Sbjct: 761 IWSLLLGACRTYHEVELSQIVADQLLR--SEDSDIGSYVAMSNLHAAEEKWDNVLEIRKV 818

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           M+ R L+K  GCSWI+V      F S D  HP++  +Y  L  L
Sbjct: 819 MKTRDLKKPAGCSWIEVDKRRRIFVSGDSSHPETDAMYNTLMAL 862



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 136/583 (23%), Positives = 259/583 (44%), Gaps = 87/583 (14%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+    + LK+CA   +L +G+A+H   ++        V   LLN+Y+            
Sbjct: 42  DHLVLQTALKSCATISSLNVGRALHSLVVKLGHISCLSVSKGLLNVYA------------ 89

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ--FRMMLRMGIR 223
            K  + D  K     K+   M + + V WN ++S    ++ +   V +  + M       
Sbjct: 90  -KGKDFDDCK-----KLLYQMPKYDTVVWNIVLSGLSGSQVHDGEVMRLVYDMHTCKETE 143

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFDFA 282
            S +S   V P  + L    +   ++   VK G  + ++  V +S + MYA+ G  +D A
Sbjct: 144 LSPVSIAIVLPVCARLRVLNAGRSLHCYAVKSG--WASETLVGNSLVSMYAKCGLVYDGA 201

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            + F    +++   WN ++ G+++N    +A   F ++L L  +  +  T  S L   + 
Sbjct: 202 YESFCEINDKDVISWNALMAGFIENGFYNDAWVFFRRML-LGPVAPNYATLTSILPVCAM 260

Query: 343 LQELD---LGQQLHAYIIKNF-VALPVIVLNAVI--------------------ERDVVS 378
           L   D   LG++LHAY +K+  +   V ++NA++                     RD+VS
Sbjct: 261 LDGDDAYSLGKELHAYALKHSDLQKDVFIVNALMSFYLRMGVVEGAEALFDGMASRDLVS 320

Query: 379 WNTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           WN +I  +  N    + + L   +   Q     SVT+ ++L A ++L+N  + KQ H ++
Sbjct: 321 WNVLIGGYASNNEYSKAVHLFQNLVSSQTLEPGSVTLISVLPACAHLQNLWMVKQIHGFI 380

Query: 438 LRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            +    ++   + + LI  YAK   + ++ + F    S  RD  +WN+++  + + G   
Sbjct: 381 SQCPTLYDDTAVSNALISSYAKCNDLDSSFRTFII--SSQRDLISWNSLLDAFAERGCEL 438

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN---VFVGT 552
           +      QM E  V P+ +TI +++     +  +   K+ HG+ +R  L QN     +G 
Sbjct: 439 QLLNLLYQMSEERVGPDSITILTLIQFYGSISKLSKIKEAHGYLLRACLCQNDTQPTLGN 498

Query: 553 SLIDMYSKSGVINYAANVF------------AKIP-------------------EKNSVT 581
           +L+D Y+K G +NYA  ++            ++IP                   + +  T
Sbjct: 499 ALLDAYAKCGCVNYANKIYKIKLGEGKLKWNSEIPGYINWNIQAGECKALEGISQTHRTT 558

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           +  MI  Y ++   E+A++L   ++  G +PDA+T +++L  C
Sbjct: 559 FNLMIRAYVENNCLEQAVALLFDLQVQGAKPDAMTIMSILPIC 601


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/647 (34%), Positives = 357/647 (55%), Gaps = 31/647 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  M  R++ +WN +V  Y K   + EA+  +  +L  GIRP   +F +V  + +   D
Sbjct: 91  VFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMD 150

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+  +V+   ++  D+ V ++ I MY + G    AR +FD    R+   WN MI
Sbjct: 151 LVRGREVHAHVVRF--DFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMI 208

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +N+  +E +ELF ++ EL  I  D +T  S +SA   L +  LG QLH+Y+++   
Sbjct: 209 SGYFENDECLEGLELFFRMREL-SIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAY 267

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + V N++I+                    RDVVSW T+IS  V N L D+ L     
Sbjct: 268 DGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKT 327

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGL 460
           M+  G M D VT+ ++LSA ++L   D+G + H    R G I +  + + LIDMY+K   
Sbjct: 328 MEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKR 387

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           I+ A +IF +    D+D  +W ++I G   N    EA + FR+M+  +  PN VT+ S L
Sbjct: 388 IEKALEIFHQIP--DKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISAL 444

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +G +  GK++H  +++  +  + F+  +++D+Y + G +  A N F  + EK+  
Sbjct: 445 SACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVG 503

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            +  ++ GY Q G     + LF+ M    I PD +TF+++L ACS +G+V EGL+ F  M
Sbjct: 504 AWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRM 563

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           +  Y I P+ +HY CV D+LGR GK+ EA+EF++ +  + +   IWG+LL +CR+H H  
Sbjct: 564 KVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDP-AIWGALLNACRIHRHVL 622

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L E+ A+ + + D  +   GY++LL N+YA+ G W+ V KVR+ M+E GL  + GCSW++
Sbjct: 623 LGELAAQHIFKQDAES--IGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVE 680

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDA 807
           V G V+ F S D  HPQ  +I  +LE    +M+ +G    + S++D 
Sbjct: 681 VKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDG 727



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 268/570 (47%), Gaps = 49/570 (8%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           LS  +  L      + LS   + G    A  +F  +       WN ++ G+       EA
Sbjct: 60  LSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEA 119

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + LY ++  +      D YT+ SVL++CA   +L  G+ VH H +R   +    V N+L+
Sbjct: 120 LCLYHRILWAGIRP--DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALI 177

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MY  C   + A M                  +FD M  R+ ++WN ++S Y + +  +E
Sbjct: 178 TMYVKCGDVVSARM------------------LFDKMPTRDRISWNAMISGYFENDECLE 219

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
            +  F  M  + I P  ++  +V  A   LGD +    ++  +V+  + Y  ++ V +S 
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVR--TAYDGNISVYNSL 277

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           I MY  +G +  A  +F     R+   W T+I G V N  P +A+E + + +E+   + D
Sbjct: 278 IQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETY-KTMEITGTMPD 336

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------- 372
           +VT  S LSA + L +LD+G +LH    +    L V+V N++I                 
Sbjct: 337 EVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFH 396

Query: 373 ---ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
              ++DV+SW ++I+    N    E L+   +M  +    +SVT+ + LSA + +     
Sbjct: 397 QIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMC 455

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           GK+ HA+ L+ G+ F+G + + ++D+Y + G ++TA   F  N   ++D   WN ++ GY
Sbjct: 456 GKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLN---EKDVGAWNILLTGY 512

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQN 547
            Q G        F++M+E  + P+ VT  S+L AC+  G +  G +      + Y +  N
Sbjct: 513 AQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPN 572

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +     ++D+  ++G +N A     ++P K
Sbjct: 573 LKHYACVVDLLGRAGKLNEAHEFIERMPIK 602



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 204/395 (51%), Gaps = 29/395 (7%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           + ++ + M+   G    A  +F    ER+   WN ++GGY +     EA+ L+ ++L   
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRIL-WA 129

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
            I  D  TF S L + +   +L  G+++HA++++    + V V+NA+I            
Sbjct: 130 GIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSA 189

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    RD +SWN MIS + +N    EGL L + M++     D +T+T+++SA   L
Sbjct: 190 RMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELL 249

Query: 425 RNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            ++ +G Q H+Y++R    ++G   + + LI MY   G  K A  +F   +   RD  +W
Sbjct: 250 GDERLGTQLHSYVVRTA--YDGNISVYNSLIQMYLSVGHWKEAESVFSGMEC--RDVVSW 305

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
             +I+G   N L ++A   ++ M      P+ VTIASVL AC  +G +++G +LH  + R
Sbjct: 306 TTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAER 365

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                 V V  SLIDMYSK   I  A  +F +IP+K+ +++T++I G   +     AL  
Sbjct: 366 TGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIF 425

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           FR M     +P+++T ++ LSAC+  G +  G +I
Sbjct: 426 FRKMI-LKSKPNSVTLISALSACARVGALMCGKEI 459



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 228/445 (51%), Gaps = 20/445 (4%)

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE----IVFDDVTFLSALSA 339
           ++   CL  N E     +    +   PVE  + FV ++ L E        +  + + LS+
Sbjct: 4   RLLQLCLSGNLEQALKHLASMQEVKIPVEE-DCFVALIRLCENKRGYSEGEYVWKAVLSS 62

Query: 340 VSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
           +  L  + LG  L +  ++   V     V   + ERD+ SWN ++  + + G  DE L L
Sbjct: 63  LVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCL 122

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
            + +   G   D  T  ++L + +   +   G++ HA+++R     +  + + LI MY K
Sbjct: 123 YHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVK 182

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G + +AR +F+K  +  RD+ +WNAMI+GY +N    E    F +M E ++ P+++T+ 
Sbjct: 183 CGDVVSARMLFDKMPT--RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMT 240

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SV+ AC  +G+  LG QLH + +R   D N+ V  SLI MY   G    A +VF+ +  +
Sbjct: 241 SVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR 300

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + V++TT+I G   + + ++AL  +++M+  G  PD +T  +VLSAC+  G +D G+++ 
Sbjct: 301 DVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLH 360

Query: 638 DLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +L ++   I      Y  VA    DM  +  ++ +A E   ++ ++ +V+  W S++   
Sbjct: 361 ELAERTGHIL-----YVVVANSLIDMYSKCKRIEKALEIFHQIPDK-DVIS-WTSVINGL 413

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSM 718
           R++     A +  +K++     NS+
Sbjct: 414 RINNRCFEALIFFRKMILKSKPNSV 438



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 207/452 (45%), Gaps = 52/452 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD +     + WN +I G+  N+   E + L+ +M++ S     D  T +SV+ AC
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELS--IDPDLMTMTSVISAC 246

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               + R+G  +H + +R   + +  VYNSL+ MY +     +AE               
Sbjct: 247 ELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAE--------------- 291

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  R+VV+W TI+S  V      +A+  ++ M   G  P  ++  +V  A +
Sbjct: 292 ---SVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACA 348

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLG       ++ L  + G  ++  + VA+S I MY++    + A +IF    +++   W
Sbjct: 349 SLGQLDMGMKLHELAERTG--HILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISW 406

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I G   NN   EA+  F +++   +   + VT +SALSA +++  L  G+++HA+ +
Sbjct: 407 TSVINGLRINNRCFEALIFFRKMILKSKP--NSVTLISALSACARVGALMCGKEIHAHAL 464

Query: 358 KNFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
           K  +     + NA++                   E+DV +WN +++ + Q G     + L
Sbjct: 465 KAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMEL 524

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE---GMESY--LID 453
              M +     D VT  +LL A S       G +   Y  R  +++     ++ Y  ++D
Sbjct: 525 FKRMVESEINPDDVTFISLLCACSRSGMVTEGLE---YFQRMKVNYHITPNLKHYACVVD 581

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +  ++G +  A +  E+      D A W A++
Sbjct: 582 LLGRAGKLNEAHEFIERMPI-KPDPAIWGALL 612


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/752 (31%), Positives = 399/752 (53%), Gaps = 49/752 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++FD + +  +V W  ++ G   +    EA+LL+ QM  S  Y +   Y +SSVL AC
Sbjct: 224 AKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPT--PYIFSSVLSAC 281

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +    ++G+ +H   ++   +   +V N+L+ +YS   + + AE               
Sbjct: 282 TKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAE--------------- 326

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF+ M +R+ V++N+++S   +     +A+  F+ M    ++P  ++  ++  A S
Sbjct: 327 ---QVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+G        +   +K G    +D+ +  + + +Y +      A + F +    N  +W
Sbjct: 384 SVGALLVGKQFHSYAIKAGMS--SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLW 441

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  Y   ++  E+ ++F Q ++++ I  +  T+ S L   S L+ +DLG+Q+H  ++
Sbjct: 442 NVMLVAYGLLDNLNESFKIFTQ-MQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVL 500

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V V + +I                    E+DVVSW  MI+ + Q+    E L 
Sbjct: 501 KTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALN 560

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           L  EMQ QG   D++   + +SA + ++  + G+Q HA     G   +  + + L+ +YA
Sbjct: 561 LFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYA 620

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G ++ A   F+K  S  +D  +WN++I+G+ Q+G  EEA   F QM +     N  T 
Sbjct: 621 RCGKVRDAYFAFDKIFS--KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF 678

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
              + A   + N++LGKQ+H   I+   D    V   LI +Y+K G I+ A   F ++PE
Sbjct: 679 GPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPE 738

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN +++  M+ GY QHG   +ALSLF  MK  G+ P+ +TFV VLSACS+ GLVDEG++ 
Sbjct: 739 KNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKY 798

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M++ + + P  EHY CV D+LGR G +  A  FV+E+  + + + +  +LL +C +H
Sbjct: 799 FQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAM-VCRTLLSACIVH 857

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + ++ E  A  LLE++ ++S    +VLLSN+YA  G W   D+ R+ M++RG++KE G 
Sbjct: 858 KNIDIGEFAASHLLELEPKDSAT--YVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGR 915

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           SWI+V   V+ F + DQ+HP   KIYE L  L
Sbjct: 916 SWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDL 947



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/562 (29%), Positives = 272/562 (48%), Gaps = 46/562 (8%)

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           + +   D    VFD M  R +  WN ++  +V  +     +  FR ML+  ++P   ++ 
Sbjct: 114 IAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYA 173

Query: 231 NVFPALSSLGD--YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V       GD  +   + ++   +  G  Y N LFV +  I +Y + G  + A+K+FD 
Sbjct: 174 GVLRGCGG-GDVPFHCVEKIHARTITHG--YENSLFVCNPLIDLYFKNGFLNSAKKVFDG 230

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +R++  W  M+ G  Q+    EA+ LF Q +    +      F S LSA ++++   +
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQ-MHTSGVYPTPYIFSSVLSACTKVEFYKV 289

Query: 349 GQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQ 388
           G+QLH  ++K   +L                       V NA+++RD VS+N++IS   Q
Sbjct: 290 GEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
            G  D+ L L  +M       D VTV +LLSA S++    VGKQ H+Y ++ G+  +  +
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIIL 409

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           E  L+D+Y K   IKTA + F   ++   +   WN M+  Y     L E+F  F QM   
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTET--ENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + PN  T  S+L  C+ +  ++LG+Q+H   ++     NV+V + LIDMY+K G +++A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F ++ EK+ V++T MI GY QH     AL+LF+ M+  GI  D I F + +SAC+  
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYC-------CVADMLGRVGKVVEAYEFVKELGEEG 680
             +++G QI          Q     Y         +  +  R GKV +AY    ++  + 
Sbjct: 588 QALNQGQQI--------HAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKD 639

Query: 681 NVLEIWGSLLGSCRLHGHSELA 702
           N+   W SL+      GH E A
Sbjct: 640 NI--SWNSLISGFAQSGHCEEA 659



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 245/514 (47%), Gaps = 41/514 (7%)

Query: 195 NTIVSW-YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           NT +S+ Y   E     +    +M   G+R ++ +++ +     S G +     ++G ++
Sbjct: 36  NTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKIL 95

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K+G  +  ++ +    + +Y   G  D A  +FD    R    WN ++  +V        
Sbjct: 96  KMG--FCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRV 153

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQ-------LQELDLGQQLHAYIIKNFVALPVI 366
           + LF ++L+ +++  D+ T+   L            ++++      H Y    FV  P+I
Sbjct: 154 LGLFRRMLQ-EKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLI 212

Query: 367 --------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                         V + + +RD VSW  M+S   Q+G ++E ++L  +M   G      
Sbjct: 213 DLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPY 272

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY----LIDMYAKSGLIKTARQIF 468
             +++LSA + +    VG+Q H  +L+ G     +E+Y    L+ +Y++ G    A Q+F
Sbjct: 273 IFSSVLSACTKVEFYKVGEQLHGLVLKQGF---SLETYVCNALVTLYSRLGNFIPAEQVF 329

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N    RD+ ++N++I+G +Q G  ++A   F++M    + P+ VT+AS+L AC+ +G 
Sbjct: 330 --NAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + +GKQ H ++I+  +  ++ +  +L+D+Y K   I  A   F     +N V +  M++ 
Sbjct: 388 LLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVA 447

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ---EYK 645
           YG       +  +F  M+  GIEP+  T+ ++L  CS    VD G QI   + +   ++ 
Sbjct: 448 YGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFN 507

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +  S+     + DM  ++GK+  A +  + L E+
Sbjct: 508 VYVSS----VLIDMYAKLGKLDHALKIFRRLKEK 537



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 188/407 (46%), Gaps = 36/407 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A ++F  +     V W  +I G+  +    EA+ L+ +M+    ++  DN  ++S
Sbjct: 522 GKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS--DNIGFAS 579

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            + ACA  + L  G+ +H        +    V N+L+++Y+ C    DA           
Sbjct: 580 AISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYF--------- 630

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                     FD +  ++ ++WN+++S + ++    EA+  F  M + G   ++ +F   
Sbjct: 631 ---------AFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPA 681

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +++ + K    ++ +++K G +  ++  V++  I +YA+ G  D A + F    E+
Sbjct: 682 VSAAANVANVKLGKQIHAMIIKTGHD--SETEVSNVLITLYAKCGNIDDAERQFFEMPEK 739

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN M+ GY Q+ H  +A+ LF  + +L  ++ + VTF+  LSA S +  +D G   
Sbjct: 740 NEISWNAMLTGYSQHGHGFKALSLFEDMKQLG-VLPNHVTFVGVLSACSHVGLVDEG--- 795

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
               IK F ++  +  + ++ +    +  ++    ++GL       V EM  Q    D++
Sbjct: 796 ----IKYFQSMREV--HGLVPKP-EHYACVVDLLGRSGLLSRARRFVEEMPIQP---DAM 845

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
               LLSA    +N D+G+   ++LL            L +MYA +G
Sbjct: 846 VCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTG 892



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 159/339 (46%), Gaps = 20/339 (5%)

Query: 380 NTMIS-AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           NT +S A+  +  +  G+  ++ M+++G   +S T   LL    +      G + H  +L
Sbjct: 36  NTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKIL 95

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G   E  +   L+D+Y   G +  A  +F++     R  + WN ++  +    +    
Sbjct: 96  KMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPV--RPLSCWNKVLHRFVAGKMAGRV 153

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACN----PMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
              FR+ML+  V P+  T A VL  C     P   +E   ++H  +I +  + ++FV   
Sbjct: 154 LGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE---KIHARTITHGYENSLFVCNP 210

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LID+Y K+G +N A  VF  + +++SV++  M+ G  Q G  E A+ LF  M   G+ P 
Sbjct: 211 LIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPT 270

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAY 670
              F +VLSAC+       G Q+  L ++Q +    S E Y C A   +  R+G  + A 
Sbjct: 271 PYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF----SLETYVCNALVTLYSRLGNFIPAE 326

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
           +    + +   V   + SL+      G+S+ A  + KK+
Sbjct: 327 QVFNAMLQRDEV--SYNSLISGLSQQGYSDKALELFKKM 363


>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/770 (30%), Positives = 391/770 (50%), Gaps = 99/770 (12%)

Query: 60   QLFDSITRPTTVIWNTIIIGFVC-NNLPYEAILLYSQM---KKSSPYTSCDNYTYSSVLK 115
            +LF  + +   VIWN ++ G     +   E + L+  M    ++ P    ++ T + VL 
Sbjct: 1027 KLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKP----NSVTIAIVLP 1082

Query: 116  ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
             CA  R    GK+VH + I+          N+L++MY+ C                    
Sbjct: 1083 VCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKC-------------------- 1121

Query: 176  YDLVCK----VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
              LVC      F+ +  ++VV+WN +++ + + +   EA + F  ML+  I+P+  +  +
Sbjct: 1122 -GLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIAS 1180

Query: 232  VFPALSSLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            + P  +SL +   Y+    V+  +++   E V D+ V +S +  Y  +   + A  +F N
Sbjct: 1181 ILPVCASLEENAGYRYGKEVHCHVLRR-MELVEDVSVINSLMSFYLRIXQMEKAEFLFRN 1239

Query: 289  CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
               R+   WN +I GY  N   ++A+ELF + + L+ I  D VT +S L A + +  L +
Sbjct: 1240 MKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQV 1299

Query: 349  GQQLHAYIIK---------------------NFVALPVIVLNAVIERDVVSWNTMISAFV 387
             + +H YII+                     N+    +     +  +D++SWN ++ AF 
Sbjct: 1300 AKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFT 1359

Query: 388  QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
            ++G +   + L++ M ++G   DS+T+  ++   + +      K+TH+Y +R G+  +G 
Sbjct: 1360 ESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGL-LQGD 1418

Query: 447  ----MESYLIDMYAKSGLIKTARQIF----EK--------------------------ND 472
                + + ++D YAK G +K A  IF    EK                          N 
Sbjct: 1419 AXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNT 1478

Query: 473  SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              + D  TWN M+  Y +N   ++A   F ++    + P++VTI S+LPAC  M ++ + 
Sbjct: 1479 MSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHML 1538

Query: 533  KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            +Q HG+ IR   + +V +  + IDMYSK G +  A  +F   P+K+ V +T M+ G+  H
Sbjct: 1539 RQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMH 1597

Query: 593  GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
            GM E AL +F  M   G++PD +   AVL ACS+AGLVDEG +IF+ +++ +  QP+ E 
Sbjct: 1598 GMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQ 1657

Query: 653  YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
            Y CV D+L R G++ +AY FV  +  E N   IWG+LLG+CR H   EL  VVA  L ++
Sbjct: 1658 YACVVDLLARGGRIKDAYTFVTRMPIEANA-NIWGTLLGACRTHHEVELGRVVADHLFKI 1716

Query: 713  DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
            ++ N   G +V++SN+YA +  W+ V ++R+ MR R L+K  GCSWI+VG
Sbjct: 1717 ESDNI--GNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVG 1764



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 171/712 (24%), Positives = 319/712 (44%), Gaps = 104/712 (14%)

Query: 88   EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            EA+ L+ +  + S     +    +++LK+C     +R G  +H + ++      + +   
Sbjct: 952  EALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKG 1011

Query: 148  LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
            LLN+Y+             K   +DY       K+F  M +R+ V WN ++S     + +
Sbjct: 1012 LLNLYA-------------KSGALDYCN-----KLFGEMDQRDPVIWNIVLSGLAGFQSH 1053

Query: 208  -VEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
              E +R FR M  +   +P++++   V P  + L +  +   V+  ++K G E  +    
Sbjct: 1054 EAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLE--SHTLA 1110

Query: 266  ASSAIFMYAELG--CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
             ++ I MYA+ G  C D A   F+    ++   WN +I G+ +N    EA +LF  +L+ 
Sbjct: 1111 GNALISMYAKCGLVCSD-AYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLK- 1168

Query: 324  DEIVFDDVTFLSALSAVSQLQE---LDLGQQLHAYIIKNF-VALPVIVLNAVI------- 372
              I  +  T  S L   + L+E      G+++H ++++   +   V V+N+++       
Sbjct: 1169 GPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIX 1228

Query: 373  -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFMIDSVTVTALL 418
                          RD+VSWN +I+ +  NG   + L L  E +  +    DSVT+ ++L
Sbjct: 1229 QMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVL 1288

Query: 419  SAASNLRNQDVGKQTHAYLLRH-GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
             A +++ N  V K  H Y++RH G+  +  + + L+  YAK    + A Q F       +
Sbjct: 1289 PACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISR--K 1346

Query: 477  DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
            D  +WNA++  +T++G           ML   + P+ +TI +++     +  ++  K+ H
Sbjct: 1347 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 1406

Query: 537  GFSIRYLL---DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILG---- 588
             +SIR+ L   D    +G  ++D Y+K G + YA N+F  + EK N VT  +MI G    
Sbjct: 1407 SYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTS 1466

Query: 589  ---------------------------YGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
                                       Y ++   ++ALSLF  ++G G++PD +T +++L
Sbjct: 1467 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 1526

Query: 622  SACSYAGLVDEGLQIFDLMQQEYKIQP---STEHYCCVADMLGRVGKVVEAYEFVKELGE 678
             AC++   V    Q        Y I+             DM  + G V  AY+    L  
Sbjct: 1527 PACAHMASVHMLRQC-----HGYVIRACFNDVRLNGAFIDMYSKCGSVFGAYKLF--LSS 1579

Query: 679  EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
                L ++ +++G   +HG  E A  +   +LE+  +   P + ++ + ++A
Sbjct: 1580 PQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVK---PDHVIITAVLFA 1628



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 202/465 (43%), Gaps = 81/465 (17%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A  LF ++     V WN II G+  N    +A+ L+S+   S      D+ T  SVL AC
Sbjct: 1233 AEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEF-ISLETIKPDSVTLVSVLPAC 1291

Query: 118  AETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A   NL++ K +H + IR         V N+LL+ Y+ C                +Y++ 
Sbjct: 1292 AHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKC----------------NYTQA 1335

Query: 177  DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV---F 233
             L  + F  + R+++++WN I+  + ++      V     MLR GIRP +I+ + +   +
Sbjct: 1336 AL--QTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYY 1393

Query: 234  PALSSLGDYK---SADVVYGLL----------------VKLGS-EYVNDLF--------- 264
             A+S +   K   S  + +GLL                 K G+ +Y  ++F         
Sbjct: 1394 AAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNV 1453

Query: 265  -VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
               +S I  Y      D A  IF+   E +   WN M+  Y +N+ P +A+ LF + L+ 
Sbjct: 1454 VTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHE-LQG 1512

Query: 324  DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
              +  D VT +S L A + +  + + +Q H Y+I+       + LN              
Sbjct: 1513 QGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIR--ACFNDVRLNGAFIDMYSKCGSVF 1570

Query: 373  ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      ++D+V +  M+  F  +G+ +E L +   M + G   D V +TA+L A S
Sbjct: 1571 GAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACS 1630

Query: 423  NLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTA 464
            +    D G +    + + HG     ME Y  ++D+ A+ G IK A
Sbjct: 1631 HAGLVDEGWKIFNSIEKVHGFQ-PTMEQYACVVDLLARGGRIKDA 1674


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/637 (32%), Positives = 354/637 (55%), Gaps = 29/637 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF+ +  +  V ++T++  Y K     +AVR +  M    + P    F  +        
Sbjct: 97  RVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENL 156

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D +    ++G+++  G  + ++LF  ++ + +YA+    + A K+F+   +R+   WNT+
Sbjct: 157 DLRRGREIHGMVITNG--FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTV 214

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY QN     A+++ +Q+ E  +   D +T +S L AV+ L+ L +G+ +H Y  +  
Sbjct: 215 VAGYAQNGFARRAVQVVLQMQEAGQKP-DSITLVSVLPAVADLKALRIGRSIHGYAFRAG 273

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V  A+++                    R+VVSWNTMI  + QNG  +E      
Sbjct: 274 FEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFL 333

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M  +G    +V++   L A +NL + + G+  H  L    I F+  + + LI MY+K  
Sbjct: 334 KMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK 393

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A  +F   +   +   TWNAMI GY QNG + EA   F +M  H++ P+  T+ SV
Sbjct: 394 RVDIAASVF--GNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSV 451

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A   +      K +HG +IR L+D+NVFV T+LID ++K G I  A  +F  + E++ 
Sbjct: 452 ITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHV 511

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           +T+  MI GYG +G    AL LF  M+   ++P+ ITF++V++ACS++GLV+EG+  F+ 
Sbjct: 512 ITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFES 571

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M++ Y ++P+ +HY  + D+LGR G++ +A++F++++  +  +  + G++LG+CR+H + 
Sbjct: 572 MKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGI-TVLGAMLGACRIHKNV 630

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL E  A +L ++D  +   GYHVLL+N+YA    W+ V +VR  M ++G++K  GCS +
Sbjct: 631 ELGEKTADELFDLDPDDG--GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLV 688

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++   V+ F S    HPQS +IY  LE L  EM+ AG
Sbjct: 689 ELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAG 725



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 154/598 (25%), Positives = 251/598 (41%), Gaps = 106/598 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ + +   V WNT++ G+  N     A+ +  QM+++      D+ T  SVL A 
Sbjct: 196 AYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQ--KPDSITLVSVLPAV 253

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ + LRIG+++H +  R        V  ++L+ Y  C S   A +              
Sbjct: 254 ADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL-------------- 299

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  RNVV+WNT++  Y +     EA   F  ML  G+ P+ +S +    A +
Sbjct: 300 ----VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACA 355

Query: 238 SLGDYKSADVVYGLL--VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           +LGD +    V+ LL   K+G     D+ V +S I MY++    D A  +F N   +   
Sbjct: 356 NLGDLERGRYVHRLLDEKKIGF----DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV 411

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI GY QN    EA+ LF + ++  +I  D  T +S ++A++ L      + +H  
Sbjct: 412 TWNAMILGYAQNGCVNEALNLFCE-MQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGL 470

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            I+  +   V V  A+I                    ER V++WN MI  +  NG   E 
Sbjct: 471 AIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREA 530

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L  EMQ      + +T  ++++A S           H+ L+  G++      Y   M 
Sbjct: 531 LDLFNEMQNGSVKPNEITFLSVIAACS-----------HSGLVEEGMY------YFESMK 573

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
              GL  T                 + AM+    + G L++A+   + M    V P +  
Sbjct: 574 ENYGLEPTMDH--------------YGAMVDLLGRAGRLDDAWKFIQDM---PVKPGITV 616

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG---TSLIDMYSKSGVINYAANVFA 572
           + ++L AC    N+ELG++    +   L D +   G     L +MY+ + + +  A V  
Sbjct: 617 LGAMLGACRIHKNVELGEK----TADELFDLDPDDGGYHVLLANMYASASMWDKVARVRT 672

Query: 573 KIPEKNSVTYT-------------TMILGYGQHGMSERALSLFRS----MKGCGIEPD 613
            + EK  +  T             T   G   H  S+R  +   +    MK  G  PD
Sbjct: 673 AM-EKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPD 729



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +S   +  R  +A  +F ++   T V WN +I+G+  N    EA+ L+ +M+  S 
Sbjct: 382 MNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ--SH 439

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D++T  SV+ A A+    R  K +H   IR   + + FV  +L++ ++ C +   A
Sbjct: 440 DIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTA 499

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              K+FD M+ R+V+ WN ++  Y       EA+  F  M    
Sbjct: 500 R------------------KLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGS 541

Query: 222 IRPSTISFVNVFPALSSLG 240
           ++P+ I+F++V  A S  G
Sbjct: 542 VKPNEITFLSVIAACSHSG 560


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/765 (30%), Positives = 391/765 (51%), Gaps = 51/765 (6%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G+   AR LF  +  P  V WN +I G         AI  +  M+KSS  ++    T  S
Sbjct: 275  GKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKST--RSTLGS 332

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL A     NL +G  VH   I+     + +V +SL++MYS C                 
Sbjct: 333  VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC----------------- 375

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              K +   KVF+ +  RN V WN ++  Y       + +  F  M   G      +F ++
Sbjct: 376  -EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                +   D +     + +++K   +   +LFV ++ + MYA+ G  + AR+IF++  +R
Sbjct: 435  LSTCAVSHDLEMGSQFHSIIIK--KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR 492

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            +   WNT+IGGYVQ+ +  EA +LF+++     IV D     S L A + +  L  G+Q+
Sbjct: 493  DNVSWNTIIGGYVQDENESEAFDLFMRMNSCG-IVSDGACLASTLKACTNVHGLYQGKQV 551

Query: 353  H---------------AYIIKNFVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLD 392
            H               + +I  +    +I     V +++ E  VVS N +I+ + QN L+
Sbjct: 552  HCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE 611

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESY 450
             E ++L  EM  +G     +T   ++ A     +  +G Q H  +++ G   EG  +   
Sbjct: 612  -EAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGIS 670

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            L+ +Y  S  +  A  +F +  S  +    W  M++G++QNG  EEA   +++M      
Sbjct: 671  LLGLYMNSRRMAEACALFSELSS-PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGAL 729

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            P+  T  +VL  C+ + ++  G+ +H        D +     +LIDMY+K G +  ++ V
Sbjct: 730  PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQV 789

Query: 571  FAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  + N V++ ++I GY ++G +E AL +F SM+   I PD ITF+ VL+ACS+AG 
Sbjct: 790  FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849

Query: 630  VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            V +G +IF++M  +Y I+   +H  C+ D+LGR G + EA +F++    + +   +W SL
Sbjct: 850  VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDA-RLWSSL 908

Query: 690  LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
            LG+CR+HG     E+ A++L+E++ +NS    +VLLSNIYA +G WE  + +RK MR+RG
Sbjct: 909  LGACRIHGDDMRGEIAAERLIELEPQNSSA--YVLLSNIYASQGRWEEANALRKAMRDRG 966

Query: 750  LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
            ++K  G SWIDVG   + FA+ DQ H    KI   LE L   M++
Sbjct: 967  VKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLMKD 1011



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/590 (29%), Positives = 272/590 (46%), Gaps = 87/590 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A + F+S+ +  T  WN+++  +     P + +  +  + ++  +   + +T+S VL   
Sbjct: 114 AEKQFNSLEKDVTA-WNSMLSMYSSIGQPGKVLRSFVSLFENLIFP--NKFTFSIVLSTS 170

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   N+  G+ +HC  I+     + +   +L++MY+ C    DA+               
Sbjct: 171 ARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQ--------------- 215

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD +   N V W  + S YVK     EAV  F  M   G RP  ++FV V     
Sbjct: 216 ---RVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYI 272

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLG  K A +++G                        E+   D                W
Sbjct: 273 SLGKLKDARLLFG------------------------EMPSPDVV-------------AW 295

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+ +    + AIE F+  +    +     T  S LSA+  +  LDLG  +HA  I
Sbjct: 296 NVMISGHGKRGCEIVAIEYFLN-MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354

Query: 358 KNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K  +A  +                     V  A+ ER+ V WN MI  +  NG   + + 
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVME 414

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
           L  +M+  G+ ID  T T+LLS  +   + ++G Q H+ +++  +    F G  + L+DM
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVG--NALVDM 472

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G ++ ARQIFE     DRD  +WN +I GY Q+    EAF  F +M    +  +  
Sbjct: 473 YAKCGALEDARQIFEH--MCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGA 530

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            +AS L AC  +  +  GKQ+H  S++  LD+ +  G+SLIDMYSK G+I  A  VF+ +
Sbjct: 531 CLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSM 590

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           PE + V+   +I GY Q+ + E A+ LF+ M   G+ P  ITF  ++ AC
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEAC 639



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/515 (26%), Positives = 244/515 (47%), Gaps = 40/515 (7%)

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           LRIGKAVH   +    +    + N+++++Y+ C              +V Y++     K 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKC-------------AQVSYAE-----KQ 117

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           F+++ + +V AWN+++S Y    +  + +R F  +    I P+  +F  V    +   + 
Sbjct: 118 FNSLEK-DVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNV 176

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +    ++  ++K+G E   + +   + + MYA+      A+++FD  ++ NT  W  +  
Sbjct: 177 EFGRQIHCSMIKMGLE--RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFS 234

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GYV+   P EA+ +F + +  +    D + F++ ++    L +L   + L       F  
Sbjct: 235 GYVKAGLPEEAVIVF-ERMRGEGHRPDHLAFVTVINTYISLGKLKDARLL-------FGE 286

Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
           +P          DVV+WN MIS   + G +   +     M+K        T+ ++LSA  
Sbjct: 287 MP--------SPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            + N D+G   HA  ++ G+     + S L+ MY+K   ++ A ++FE  +  +R+   W
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE--ERNDVLW 396

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAMI GY  NG   +    F  M       +  T  S+L  C    ++E+G Q H   I+
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK 456

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             L +N+FVG +L+DMY+K G +  A  +F  + ++++V++ T+I GY Q      A  L
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           F  M  CGI  D     + L AC+    + +G Q+
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQV 551



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 205/448 (45%), Gaps = 63/448 (14%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           + ++ + +YA+     +A K F N LE++   WN+M+  Y     P + +  FV + E  
Sbjct: 97  LGNAIVDLYAKCAQVSYAEKQF-NSLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFE-- 153

Query: 325 EIVF-DDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI----------- 366
            ++F +  TF   LS  ++   ++ G+Q+H  +IK      ++    ++           
Sbjct: 154 NLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGD 213

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V + +++ + V W  + S +V+ GL +E +++   M+ +G   D +    +      
Sbjct: 214 AQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV------ 267

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
                                       I+ Y   G +K AR +F +  S   D   WN 
Sbjct: 268 ----------------------------INTYISLGKLKDARLLFGEMPS--PDVVAWNV 297

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MI+G+ + G    A   F  M + +V     T+ SVL A   + N++LG  +H  +I+  
Sbjct: 298 MISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L  N++VG+SL+ MYSK   +  AA VF  + E+N V +  MI GY  +G S + + LF 
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFM 417

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            MK  G   D  TF ++LS C+ +  ++ G Q   ++ ++ K+  +      + DM  + 
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKK-KLTKNLFVGNALVDMYAKC 476

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           G + +A +  + + +  NV   W +++G
Sbjct: 477 GALEDARQIFEHMCDRDNV--SWNTIIG 502



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 114/213 (53%), Gaps = 4/213 (1%)

Query: 429 VGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +GK  H+  L  GI  EG + + ++D+YAK   +  A + F   +S ++D   WN+M++ 
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF---NSLEKDVTAWNSMLSM 134

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           Y+  G   +   +F  + E+ + PN  T + VL       N+E G+Q+H   I+  L++N
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
            + G +L+DMY+K   +  A  VF  I + N+V +T +  GY + G+ E A+ +F  M+G
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            G  PD + FV V++     G + +   +F  M
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/619 (34%), Positives = 346/619 (55%), Gaps = 33/619 (5%)

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           Y K+     A+  F  M    +RP   +F  +        D K    ++G ++  G  + 
Sbjct: 5   YAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSW- 63

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            +LF  +  + MYA+    + A  +FD   ER+   WNTMI GY QN     A+ L +++
Sbjct: 64  -NLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRM 122

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NF 360
            E      D +T +S L AV+  + L +G  +H Y+++                      
Sbjct: 123 SEEGHRP-DSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS 181

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFMIDSVTVTALLS 419
           V++  ++ + +  R VVSWN+MI  +VQ+G D EG ML+++ M  +G    +VTV   L 
Sbjct: 182 VSIARVIFDGMDHRTVVSWNSMIDGYVQSG-DAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 420 AASNLRNQDVGKQTHAYL--LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A ++L + + GK  H  +  L+       M S LI MY+K   +  A  IF+  +  ++ 
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNS-LISMYSKCKRVDIAADIFK--NLRNKT 297

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +WNAMI GY QNG + EA  AF +M   N+ P+  T+ SV+PA   +      K +HG
Sbjct: 298 LVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHG 357

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
             IR  LD+NVFV T+L+DMY+K G I+ A  +F  +  ++ +T+  MI GYG HG+ + 
Sbjct: 358 LVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKT 417

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           ++ LF+ MK   I+P+ ITF+  LSACS++GLV+EGL  F+ M+++Y I+P+ +HY  + 
Sbjct: 418 SVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMV 477

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G++ +A++F++++  +  +  ++G++LG+C++H + +L E  A ++ +++  + 
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGI-TVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDG 536

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GYHVLL+NIYA    W  V KVR  M + GL+K  GCS +++G  V+ F S    HPQ
Sbjct: 537 --GYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQ 594

Query: 778 SHKIYEMLERLAMEMRNAG 796
           S KIY  LE L  E+R AG
Sbjct: 595 SKKIYSYLETLVDEIRAAG 613



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 256/522 (49%), Gaps = 47/522 (9%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+  +S+MK  S      N+TY  +LK C +  +L+ GK +H   I    + + F    +
Sbjct: 14  ALSFFSRMKHDSVRPVVYNFTY--LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGV 71

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C    DA              Y++    FD M  R++V WNT++S Y +     
Sbjct: 72  VNMYAKCRQINDA--------------YNM----FDRMPERDLVCWNTMISGYAQNGFAK 113

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
            A+     M   G RP +I+ V++ PA++     +    V+G +++ G E + +  V+++
Sbjct: 114 VALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVN--VSTA 171

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + MY++ G    AR IFD    R    WN+MI GYVQ+     A+ +F ++L+ + +  
Sbjct: 172 LVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD-EGVQP 230

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
            +VT + AL A + L +L+ G+ +H  + +  +   V V+N++I                
Sbjct: 231 TNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIF 290

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                + +VSWN MI  + QNG  +E L    EMQ +    DS T+ +++ A + L    
Sbjct: 291 KNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPR 350

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
             K  H  ++R  +     + + L+DMYAK G I TAR++F+  ++  R   TWNAMI G
Sbjct: 351 QAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNA--RHVITWNAMIDG 408

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQ 546
           Y  +GL + +   F++M +  + PN +T    L AC+  G +E G          Y ++ 
Sbjct: 409 YGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEP 468

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
            +    +++D+  ++G +N A +   K+P K  +T    +LG
Sbjct: 469 TMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLG 510



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 221/500 (44%), Gaps = 83/500 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +FD +     V WNT+I G+  N     A++L  +M +       D+ T  S+L A 
Sbjct: 84  AYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRP--DSITIVSILPAV 141

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+TR LRIG AVH + +R        V  +L++MYS C S   A +              
Sbjct: 142 ADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARV-------------- 187

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  R VV+WN+++  YV++     A+  F+ ML  G++P+ ++ +    A +
Sbjct: 188 ----IFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACA 243

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LGD +    V+ L+ +L  +  +D+ V +S I MY++    D A  IF N   +    W
Sbjct: 244 DLGDLERGKFVHKLVDQLKLD--SDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSW 301

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN    EA+  F + ++   I  D  T +S + A+++L      + +H  +I
Sbjct: 302 NAMILGYAQNGCVNEALNAFCE-MQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           + F+   V V+ A+++                    R V++WN MI  +  +GL    + 
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L  EM+K     + +T    LSA S+                                  
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSH---------------------------------- 446

Query: 458 SGLIKTARQIFE--KNDSG-DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           SGL++     FE  K D G +     + AM+    + G L +A+   ++M    + P + 
Sbjct: 447 SGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKM---PIKPGIT 503

Query: 515 TIASVLPACNPMGNIELGKQ 534
              ++L AC    N++LG++
Sbjct: 504 VYGAMLGACKIHKNVDLGEK 523



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 194/423 (45%), Gaps = 41/423 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR +FD +   T V WN++I G+V +     A+L++ +M       +  N T   
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPT--NVTVMG 237

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L ACA+  +L  GK VH    +   +    V NSL++MYS C                 
Sbjct: 238 ALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKC----------------- 280

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + D+   +F  +R + +V+WN ++  Y +     EA+  F  M    I+P + + V+V
Sbjct: 281 -KRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSV 339

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PAL+ L   + A  ++GL+++   +   ++FV ++ + MYA+ G    ARK+FD    R
Sbjct: 340 IPALAELSIPRQAKWIHGLVIRRFLD--KNVFVMTALVDMYAKCGAIHTARKLFDMMNAR 397

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI GY  +     ++ELF + ++   I  +D+TFL ALSA S    ++ G   
Sbjct: 398 HVITWNAMIDGYGTHGLGKTSVELFKE-MKKGTIKPNDITFLCALSACSHSGLVEEGLCF 456

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ-KQGFMIDS 411
              + K++           IE  +  +  M+    + G  ++    + +M  K G  +  
Sbjct: 457 FESMKKDY----------GIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITV-- 504

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS---GLIKTARQIF 468
               A+L A    +N D+G++    + +      G    L ++YA +   G +   R I 
Sbjct: 505 --YGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIM 562

Query: 469 EKN 471
           EK+
Sbjct: 563 EKS 565



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 116/231 (50%), Gaps = 9/231 (3%)

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+ GY ++  L+ A   F +M   +V P V     +L  C    +++ GK++HG  I   
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              N+F  T +++MY+K   IN A N+F ++PE++ V + TMI GY Q+G ++ AL L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ---EYKIQPSTEHYCCVADML 660
            M   G  PD+IT V++L A +   L+  G+ +   + +   E  +  ST     + DM 
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVST----ALVDMY 176

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
            + G V  A       G +   +  W S++      G +E A ++ +K+L+
Sbjct: 177 SKCGSVSIARVIFD--GMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLD 225



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S +S   +  R  +A  +F ++   T V WN +I+G+  N    EA+  + +M+  S 
Sbjct: 270 MNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQ--SR 327

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D++T  SV+ A AE    R  K +H   IR F + + FV  +L++MY+ C +   A
Sbjct: 328 NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTA 387

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              K+FD M  R+V+ WN ++  Y        +V  F+ M +  
Sbjct: 388 R------------------KLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGT 429

Query: 222 IRPSTISFVNVFPALSSLG 240
           I+P+ I+F+    A S  G
Sbjct: 430 IKPNDITFLCALSACSHSG 448


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/755 (30%), Positives = 400/755 (52%), Gaps = 52/755 (6%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           + +SI    T  +N+++         ++ +  Y  M+K+  +T  D YT+ S+ KAC   
Sbjct: 5   IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKT--HTQLDAYTFPSLFKACTNL 62

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
                G ++H   +    +   ++ +SL++ Y+                   +    L  
Sbjct: 63  NLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYA------------------KFGCIHLGR 104

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFDTM +RNVV W TI+  Y +      A   F+ M   GI+P++++ +++ P +S L 
Sbjct: 105 KVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL- 163

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                 ++    + +   + +DL +++S + MY + G    AR++F++   R+   WN++
Sbjct: 164 ----PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSL 219

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +  Y +     E ++L +Q +++++I  D  TF SALSA +   +L LG+ +H  ++K+ 
Sbjct: 220 LSAYSKIGATEEILQL-LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDG 278

Query: 361 V--------ALPVI------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +        AL V+            V  +  E+DVV W  MIS  VQN   D+ L + Y
Sbjct: 279 LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFY 338

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M +      + T+ + L+A + L   D+G   H Y+LR GI  +   ++ L+ MYAK  
Sbjct: 339 QMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCN 398

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            ++ +  IF  N   ++D  +WNA++AG+ +NG L +    F +M +  + P+ +T+ S+
Sbjct: 399 KLQQSCSIF--NKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSL 456

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC   G +  GK +H F +R  L   +   T+L+DMY K G +  A   F  + +++ 
Sbjct: 457 LQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDL 516

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V ++T+I+GYG +G  E AL  +    G G+EP+ + F++VLSACS+ GL+ +GL I++ 
Sbjct: 517 VAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYES 576

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M +++++ P+ EH  CV D+L R GKV EAY F K + +E +++ + G LL +CR++G  
Sbjct: 577 MTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIV-VLGMLLDACRVNGRV 635

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL +V+A+ + E+   +  PG  V L+N YA    W+ V+K   +MR  GL+K  G S I
Sbjct: 636 ELGKVIARDMFELKPVD--PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           +V G    F +    HP+  KI   ++ L+  +RN
Sbjct: 694 EVHGTTFTFFASHNSHPKIEKIILTVKALSKNIRN 728



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 262/557 (47%), Gaps = 50/557 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  HL R++FD++ +   V W TII  +        A  ++ QM++S         T  +
Sbjct: 98  GCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQP-----TSVT 152

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L        L +   +HC  I         + NS++NMY  C    DA           
Sbjct: 153 LLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADAR---------- 202

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F+++  R++V+WN+++S Y K     E ++  + M    I+P   +F + 
Sbjct: 203 --------RLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +  GD +   +V+GL++K G     D  V S+ + +Y    C D A K+F +  E+
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNI--DQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W  MI G VQN+   +A+ +F Q++E   +     T  S L+A +QL   D+G  +
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIE-SNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 353 HAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLD 392
           H Y+++  + L +                     + N ++E+D+VSWN +++   +NG  
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
            +G+    EM+K     DS+TVT+LL A  +      GK  H ++LR   I     E+ L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G ++ A++ F+      RD   W+ +I GY  NG  E A   + + L   + P
Sbjct: 492 VDMYFKCGNLENAQKCFDCML--QRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549

Query: 512 NVVTIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N V   SVL AC+  G I  G  ++   +  + +  N+     ++D+ S++G ++ A + 
Sbjct: 550 NHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSF 609

Query: 571 FAKIPEKNSVTYTTMIL 587
           +  + ++ S+    M+L
Sbjct: 610 YKMMFKEPSIVVLGMLL 626


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 246/765 (32%), Positives = 410/765 (53%), Gaps = 49/765 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR      LF  +     + WN +I G         A+L Y +M  S+   S D YT+  
Sbjct: 93  GRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSN--VSPDKYTFPY 150

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC    N+ +   VH        +   FV ++L+ +Y+      DA           
Sbjct: 151 VIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDAR---------- 200

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VFD + +R+ + WN ++  YVK+  +  A+  F  M       +++++  +
Sbjct: 201 --------RVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCI 252

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               ++ G +     V+GL++  G E+  D  VA++ + MY++ G    ARK+F+   + 
Sbjct: 253 LSICATRGKFCLGTQVHGLVIGSGFEF--DPQVANTLVAMYSKCGNLFDARKLFNTMPQT 310

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  WN +I GYVQN    EA  LF  ++    +  D VTF S L ++ +   L   +++
Sbjct: 311 DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG-VKPDSVTFASFLPSILESGSLRHCKEV 369

Query: 353 HAYIIKNFVALPVIVLNAVIE-----------RDVVSWNT---------MISAFVQNGLD 392
           H+YI+++ V   V + +A+I+           R +   NT         MIS +V +GL+
Sbjct: 370 HSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLN 429

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYL 451
            + +     + ++G + +S+T+ ++L A + L    +GK+ H  +L+  + +   + S +
Sbjct: 430 IDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAI 489

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            DMYAK G +  A + F +    + D   WN+MI+ ++QNG  E A   FRQM       
Sbjct: 490 TDMYAKCGRLDLAYEFFRRMS--ETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKF 547

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + V+++S L +   +  +  GK++HG+ IR     + FV ++LIDMYSK G +  A  VF
Sbjct: 548 DSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVF 607

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +  KN V++ ++I  YG HG +   L LF  M   G+ PD +TF+ ++SAC +AGLV 
Sbjct: 608 NLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVG 667

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG+  F  M +EY I    EHY C+ D+ GR G++ EA++ +K +    +   +WG+LLG
Sbjct: 668 EGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDA-GVWGTLLG 726

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CRLHG+ ELA++ ++ LLE+D +NS  GY+VLLSN++A+ G W +V KVR+ M+E+G++
Sbjct: 727 ACRLHGNVELAKLASRHLLELDPKNS--GYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQ 784

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  G SWIDV G  + F++ +  HP+S +IY +L  L +E+R  G
Sbjct: 785 KIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQG 829



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 50/110 (45%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S+  AC+    ++  +Q+H   I   +     + + ++ +Y   G I+   N+F  + 
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             N++ +  MI G    G  + AL  +  M G  + PD  TF  V+ AC 
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACG 156


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/595 (34%), Positives = 347/595 (58%), Gaps = 31/595 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R+VV+WN++VS ++    + +A R    M+R G   +  S V+V PA  +  + K  
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++ L VK+G   + +L  A++ + MY + G  + + ++FD  LE+N   WN+ IG ++
Sbjct: 61  LSIHALAVKVGLNTMVNL--ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFL 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
                 + + +F ++ E   ++   +T  S L A+ +L   DLG+++H Y IK  + L +
Sbjct: 119 NAGFYGDVLRMFRKMSE-HNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDI 177

Query: 366 IVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            V N++++                    R+VVSWN MI+  VQNG + E   LV +MQK 
Sbjct: 178 FVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKS 237

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
           G   +S+T+  +L A + + +  +GKQ HA+ +R G+ F+  + + LIDMY+K G +  A
Sbjct: 238 GECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLA 297

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R IFE+++   +D  ++N +I GY+Q+    E+ + F+QM    +  + V+    L AC 
Sbjct: 298 RNIFERSE---KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACT 354

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +   + GK++H   +R LL  + F+  SL+D+Y+K G++  A+ +F KI +K+  ++ T
Sbjct: 355 NLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNT 414

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MILGYG HG  + A  LF  MKG G++ D ++++AVL+ACS+ GLVD+G + F  M  + 
Sbjct: 415 MILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ- 473

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I+P   HY C+ D+LGR G++ +  E ++++    N  ++WG+LLG+CR+HG+ ELA+ 
Sbjct: 474 NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANS-DVWGALLGACRIHGNIELAQW 532

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            A+ L E+   +S  GY+ L+ N+YAE G W   +K+RK M+ R ++K    SW+
Sbjct: 533 AAEHLFELKPEHS--GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 585



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 266/553 (48%), Gaps = 52/553 (9%)

Query: 70  TVIWNTIIIGFVCNNLPYEAI-LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
            V WN+++  F+ N + ++A   L S M+   P       +  SV+ AC   +  + G +
Sbjct: 6   VVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVA---SLVSVVPACGTEQEEKFGLS 62

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           +H   ++   N    + N+L++MY              K+ +V+ S      +VFD M  
Sbjct: 63  IHALAVKVGLNTMVNLANALVDMYG-------------KFGDVEAS-----MQVFDGMLE 104

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           +N V+WN+ +  ++    Y + +R FR M    + P +I+  ++ PAL  LG +     V
Sbjct: 105 QNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREV 164

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +G  +K   +   D+FVA+S + MYA+ G  + A  IF+   +RN   WN MI   VQN 
Sbjct: 165 HGYSIKRAMDL--DIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNG 222

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              EA  L   + +  E   + +T ++ L A +++  L +G+Q+HA+ I+  +   + + 
Sbjct: 223 AETEAFRLVTDMQKSGECP-NSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFIS 281

Query: 369 NAVI-------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           NA+I                   E+D VS+NT+I  + Q+    E L+L  +M+  G   
Sbjct: 282 NALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 341

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHFEGMESYLIDMYAKSGLIKTARQ 466
           D+V+    LSA +NL     GK+ H  L+R    G  F  + + L+D+Y K G++ TA +
Sbjct: 342 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPF--LSNSLLDLYTKGGMLVTASK 399

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           IF  N    +D A+WN MI GY  +G ++ AF  F  M    +  + V+  +VL AC+  
Sbjct: 400 IF--NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHG 457

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTM 585
           G ++ GK+     +   ++        ++D+  ++G ++  A +   +P   NS  +  +
Sbjct: 458 GLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGAL 517

Query: 586 ILGYGQHGMSERA 598
           +     HG  E A
Sbjct: 518 LGACRIHGNIELA 530



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 225/476 (47%), Gaps = 48/476 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    + Q+FD +     V WN+ I  F+      + + ++ +M + +      + T SS
Sbjct: 90  GDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPG--SITLSS 147

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A  E  +  +G+ VH + I+   +   FV NSL++MY+                   
Sbjct: 148 LLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAK------------------ 189

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           +   +    +F+ M+ RNVV+WN +++  V+     EA R    M + G  P++I+ VNV
Sbjct: 190 FGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNV 249

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA + +   K    ++   ++ G  +  DLF++++ I MY++ G    AR IF+   E+
Sbjct: 250 LPACARMASLKMGKQIHAWSIRRGLMF--DLFISNALIDMYSKCGQLSLARNIFERS-EK 306

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   +NT+I GY Q+    E++ LF Q+  +  I +D V+F+ ALSA + L     G+++
Sbjct: 307 DDVSYNTLILGYSQSPWCFESLLLFKQMRSVG-IDYDAVSFMGALSACTNLSVFKHGKEI 365

Query: 353 HAYIIKNFVA-LPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H  +++  ++  P +                   + N + ++DV SWNTMI  +  +G  
Sbjct: 366 HCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQI 425

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYL 451
           D    L   M+  G   D V+  A+L+A S+    D GK+  + ++   I  + M  + +
Sbjct: 426 DIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACM 485

Query: 452 IDMYAKSG-LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +D+  ++G L K A  I +     + D   W A++     +G +E A  A   + E
Sbjct: 486 VDLLGRAGQLSKCAEIIRDMPFPANSD--VWGALLGACRIHGNIELAQWAAEHLFE 539



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 188/416 (45%), Gaps = 40/416 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G    A  +F+ +     V WN +I   V N    EA  L + M+KS     C N  T  
Sbjct: 191 GSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSG---ECPNSITLV 247

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +VL ACA   +L++GK +H   IR       F+ N+L++MYS C                
Sbjct: 248 NVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKC---------------- 291

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
              +  L   +F+   + + V++NT++  Y ++    E++  F+ M  +GI    +SF+ 
Sbjct: 292 --GQLSLARNIFERSEKDD-VSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMG 348

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A ++L  +K    ++ +LV+         F+++S + +Y + G    A KIF+   +
Sbjct: 349 ALSACTNLSVFKHGKEIHCVLVR--RLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITK 406

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++   WNTMI GY  +     A ELF ++++ D + +D V++++ L+A S    +D G++
Sbjct: 407 KDVASWNTMILGYGMHGQIDIAFELF-ELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKK 465

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
             + ++              IE   + +  M+    + G   +   ++ +M    F  +S
Sbjct: 466 YFSQMVAQ-----------NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP---FPANS 511

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
               ALL A     N ++ +    +L        G  + +I+MYA++G    A +I
Sbjct: 512 DVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKI 567


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 224/749 (29%), Positives = 395/749 (52%), Gaps = 52/749 (6%)

Query: 77  IIGFVCNNLPYEAILLYSQMKK--SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
           II     NL  EA+  +   +K  SSP  S    TY+ ++ AC+  R+L  G+ +H H +
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKS---VTYTHLINACSSLRSLEHGRKIHRHML 125

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
            C   P   + N +L+MY  C S  +A                    +FD+M  +NVV+W
Sbjct: 126 TCNYQPDMILQNHILSMYGKCGSLKEAR------------------NMFDSMPLKNVVSW 167

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            +++S Y +      A+  +  MLR G  P   +F ++  + S L D+K A  ++  ++K
Sbjct: 168 TSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLK 227

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
             SE+  DL   ++ I MY +      A  +F   + ++   W +MI G+ Q  + +EA+
Sbjct: 228 --SEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---------------- 358
             F ++L       ++  F SA SA S+L E D G+Q+H   IK                
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345

Query: 359 ----NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                F+     V   + + D+V+WN +I+ F       E      +M+  G + + VTV
Sbjct: 346 YAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTV 405

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS 473
            +LL A S     + G Q H+Y+++ G + +  + + L+ MY+K   +  A Q+FE  D 
Sbjct: 406 LSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE--DI 463

Query: 474 GDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           G++ D  +WN ++    Q     E     + M    + P+ VT+ +VL +   + + E+G
Sbjct: 464 GNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            Q+H F ++  L+ ++ V  +LI+MY+K G +  A  +F  I   + ++++++I+GY Q 
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  + A  LFR+M+G G++P+ ITFV +L+ACS+ G+V+EGL+++  MQ++Y+I P+ EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
             C+ D+L R G +  A +F++++    +V+ +W +LL +C++HG+ E+ +  A+ +L++
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIRQMPFVPDVV-VWKTLLAACKVHGNLEVGKRAAENVLKI 702

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS     V+L NI+A  G+W++  ++R  MR   + K  G SWI++   V+ F ++D
Sbjct: 703 DPSNSAAV--VMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAED 760

Query: 773 QEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
             HP+  KIY MLE L +++ +     +Q
Sbjct: 761 NLHPERGKIYTMLEELMLQILDDSCDPLQ 789



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 279/561 (49%), Gaps = 50/561 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FDS+     V W ++I G+        AI LY QM +S      D++T+ S++K+C
Sbjct: 152 ARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIP--DHFTFGSIVKSC 209

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   + ++ + +H H ++          N+L++MY+                   +S+  
Sbjct: 210 SGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYT------------------KFSQMA 251

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
               VF  +  +++++W ++++ + +    +EA+  FR ML   + +P+   F + F A 
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSAC 311

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L +      ++GL +K G    +DLF   S   MYA+ G  + AR +F +  + +   
Sbjct: 312 SKLLEPDCGRQIHGLCIKFG--LGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVA 369

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I G+   ++  E+   F Q +    +V +DVT LS L A S+   L+ G Q+H+YI
Sbjct: 370 WNAIIAGFASVSNAKESSSFFSQ-MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 357 IKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEG 395
           +K    L + V N+++                     + D+VSWNT+++A +Q     E 
Sbjct: 429 VKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEV 488

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L   M       D VT+T +L ++  + + +VG Q H ++++ G++ +  + + LI+M
Sbjct: 489 LRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINM 548

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y K G ++ AR++F+    G+ D  +W+++I GY Q G  +EAF  FR M    V PN +
Sbjct: 549 YTKCGSLECARKMFDS--IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEI 606

Query: 515 TIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T   +L AC+ +G +E G +L+      Y +       + ++D+ +++G ++ A +   +
Sbjct: 607 TFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQ 666

Query: 574 IP-EKNSVTYTTMILGYGQHG 593
           +P   + V + T++     HG
Sbjct: 667 MPFVPDVVVWKTLLAACKVHG 687



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 195/427 (45%), Gaps = 38/427 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F  I +P  V WN II GF   +   E+   +SQM+ +      ++ T  S+L AC
Sbjct: 355 ARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVP--NDVTVLSLLCAC 412

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +E   L  G  VH + ++   N    V NSLL+MYS C +  DA    L+  E       
Sbjct: 413 SEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDA----LQVFE------- 461

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                 D   + ++V+WNT+++  ++  +  E +R  ++M    I+P  ++  NV  +  
Sbjct: 462 ------DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +  Y+    ++  ++K G     D+ V+++ I MY + G  + ARK+FD+    +   W
Sbjct: 516 QIASYEVGSQIHCFIMKSGLNL--DISVSNALINMYTKCGSLECARKMFDSIGNPDIISW 573

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           +++I GY Q     EA ELF  +  L  +  +++TF+  L+A S +  ++ G +L+  + 
Sbjct: 574 SSLIVGYAQAGCGKEAFELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGLKLYRTMQ 632

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           +++   P         ++  S   M+    + G  D     + +M    F+ D V    L
Sbjct: 633 EDYRISPT--------KEHCS--CMVDLLARAGCLDVAEDFIRQMP---FVPDVVVWKTL 679

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT---ARQIFEKNDSG 474
           L+A     N +VGK+    +L+           L +++A SG  K     R    + D G
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVG 739

Query: 475 DRDQATW 481
                +W
Sbjct: 740 KVPGQSW 746


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 247/820 (30%), Positives = 411/820 (50%), Gaps = 62/820 (7%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPT 69
           +PPPP    P PP L  + S   P P   TP        +    RP   R +  +   P 
Sbjct: 1   MPPPPARTHPNPPLLHLLASHRAPQPLPLTPA----HGHLPPRKRP---RGVGSAAAPPP 53

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKK------SSPYTSCDNYTYSSVLKACAETRNL 123
                +    +   +    A+  + Q+ +      SSP    D   Y ++ + C   R +
Sbjct: 54  PRAAASAEATYSDRSAALRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAV 112

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
             G       +R  +       +  L + +  LS L      +++ E+ ++      +VF
Sbjct: 113 DAG-------MRACARADAEHPSFGLRLGNAMLSML------VRFGEIWHA-----WRVF 154

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
             M  R+V +WN +V  Y K     EA+  +  ML  G+RP   +F  V      + D++
Sbjct: 155 AKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWR 214

Query: 244 SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
               V+  +++ G  + +++ V ++ + MYA+ G    ARK+FD     +   WN MI G
Sbjct: 215 MGREVHAHVLRFG--FGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           + +N+     +ELF+ +LE +E+  + +T  S   A   L E+   +++H + +K   A+
Sbjct: 273 HFENHECEAGLELFLTMLE-NEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 364 PVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            V   N++I+                    +D +SW  MIS + +NG  D+ L +   M+
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIK 462
                 D VT+ + L+A + L   DVG + H      G I +  + + L++MYAKS  I 
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A ++F+     ++D  +W++MIAG+  N    EA   FR ML H V PN VT  + L A
Sbjct: 452 KAIEVFKF--MAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSA 508

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C   G +  GK++H + +R  +    +V  +L+D+Y K G  +YA   F+   EK+ V++
Sbjct: 509 CAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSW 568

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             M+ G+  HG+ + ALSLF  M   G  PD +TFVA+L ACS AG+V +G ++F +M +
Sbjct: 569 NIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTE 628

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ I P+ +HY C+ D+L RVGK+ EAY  +  +  + +   +WG+LL  CR+H H EL 
Sbjct: 629 KFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA-AVWGALLNGCRIHRHVELG 687

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E+ AK +LE++  +    YHVLL ++Y + G W  V +VRK MRE+GL ++ GCSW++V 
Sbjct: 688 ELAAKVILELEPNDV--AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVK 745

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           G  + F + D+ HPQ  +I  +L  +   M+  G   +++
Sbjct: 746 GVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVES 785


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 243/766 (31%), Positives = 385/766 (50%), Gaps = 65/766 (8%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F  +       W TII  +  +     AI ++ +M++      CD  T+ +VLKACA 
Sbjct: 83  EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEG--VRCDAVTFLAVLKACAR 140

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +L  G+++H   +         + N LL++Y +C     A ++               
Sbjct: 141 LGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL--------------- 185

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
              F+ M R ++V+WN  ++   ++     A+  F+ M   G+RP+ I+ V     LS  
Sbjct: 186 ---FERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLV---ITLSVC 238

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              + A  ++ ++ + G E    L V+++    YA LG  D A+++FD   ER+   WN 
Sbjct: 239 AKIRQARAIHSIVRESGLE--QTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNA 296

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+G Y Q+ H  EA  LF ++L  + I    VT ++A +  S L+    G+ +HA  ++ 
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLH-EGIPPSKVTLVNASTGCSSLR---FGRMIHACALEK 352

Query: 360 FVALPVIVLNAVIER-------------------DVVSWNTMISAFVQNGLDDEGLMLVY 400
            +   +++ NA+++                    + VSWNTMI+   Q G     L L  
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPGNAVSWNTMIAGSSQKGQMKRALELFQ 412

Query: 401 EMQKQGFMIDSVTVTALLSA-ASN---LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            MQ +G      T   LL A ASN    R    G++ H+ ++  G   E  + + ++ MY
Sbjct: 413 RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMY 472

Query: 456 AKSGLIKTARQIFEKNDSGDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           A  G I  A   F++    DR D  +WNA+I+  +Q+G  + A   FR+M  H V PN +
Sbjct: 473 ASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  +VL AC     +  G  +H       ++ NVFV T+L  MY + G +  A  +F K+
Sbjct: 533 TCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKV 592

Query: 575 P-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
             E++ V +  MI  Y Q+G++  AL LF  M+  G  PD  +FV+VLSACS+ GL DEG
Sbjct: 593 AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG 652

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            +IF  M+Q Y I PS +HY C  D+LGR G + +A E ++ +  +  VL +W +LLG+C
Sbjct: 653 WEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVL-VWKTLLGAC 711

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPG---YHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           R +   +   +    + E+D     PG    +V+LSNI A  G W+   +VR EM  RGL
Sbjct: 712 RKYRDVDRGRLANSMVRELD-----PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RK+ G SWI++   V+ F + D+ HP+S +IY  LERL  E+R  G
Sbjct: 767 RKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 173/666 (25%), Positives = 302/666 (45%), Gaps = 74/666 (11%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+A  + R L  G+ +H   +         + N LL +Y  C S  D E          
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSL--GLEEELGNHLLRLYLKCESLGDVE---------- 82

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF  +  R+  +W TI++ Y +  +   A+  F  M + G+R   ++F+ V
Sbjct: 83  --------EVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAV 134

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + LGD      ++  +V+ G E      +A+  + +Y   GC   A  +F+  +ER
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLE--GKSVLANLLLHIYGSCGCVASAMLLFER-MER 191

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN  I    Q+     A+ELF Q ++L+ +    +T +  LS  +++++    + +
Sbjct: 192 DLVSWNAAIAANAQSGDLDMALELF-QRMQLEGVRPARITLVITLSVCAKIRQ---ARAI 247

Query: 353 HAYIIKNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLD 392
           H+ + ++ +   ++V  A+                     ERDVVSWN M+ A+ Q+G  
Sbjct: 248 HSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E  +L   M  +G     VT+    +  S+LR    G+  HA  L  G+  +  + + L
Sbjct: 308 SEAALLFARMLHEGIPPSKVTLVNASTGCSSLR---FGRMIHACALEKGLDRDIVLGNAL 364

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY + G  + AR +FE       +  +WN MIAG +Q G ++ A   F++M    + P
Sbjct: 365 LDMYTRCGSPEEARHLFEGIPG---NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAP 421

Query: 512 NVVTIASVLP--ACNP--MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
              T  ++L   A NP     +  G++LH   +         +GT+++ MY+  G I+ A
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481

Query: 568 ANVF---AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           A  F   A     + V++  +I    QHG  +RAL  FR M   G+ P+ IT VAVL AC
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           + A  + EG+ + D ++    ++ +      +A M GR G +  A E  +++  E +V+ 
Sbjct: 542 AGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVV- 599

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI-------YAEEGNWEN 737
           I+ +++ +   +G   LA    K    M    S P     +S +        A+EG WE 
Sbjct: 600 IFNAMIAAYSQNG---LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG-WEI 655

Query: 738 VDKVRK 743
              +R+
Sbjct: 656 FRSMRQ 661



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 132/587 (22%), Positives = 247/587 (42%), Gaps = 95/587 (16%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           Q   IHS+       +T  + + L S   + G    A+++FD       V WN ++  + 
Sbjct: 243 QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYA 302

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            +    EA LL+++M       S    T  +    C+   +LR G+ +H   +    +  
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPS--KVTLVNASTGCS---SLRFGRMIHACALEKGLDRD 357

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             + N+LL+MY+ C S  +A                    +F+ +   N V+WNT+++  
Sbjct: 358 IVLGNALLDMYTRCGSPEEAR------------------HLFEGI-PGNAVSWNTMIAGS 398

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV----VYGLLVKLGS 257
            +  +   A+  F+ M   G+ P   +++N+  A++S  +   A      ++  +V  G 
Sbjct: 399 SQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG- 457

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFD-NCLERNTEV--WNTMIGGYVQNNHPVEAI 314
            Y ++  + ++ + MYA  G  D A   F    +E   +V  WN +I    Q+ H   A+
Sbjct: 458 -YASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV--- 371
             F + ++L  +  + +T ++ L A +    L  G  +H ++  + +   V V  A+   
Sbjct: 517 GFF-RRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASM 575

Query: 372 ------------------IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                             +ERDVV +N MI+A+ QNGL  E L L + MQ++G   D  +
Sbjct: 576 YGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQS 635

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
             ++LSA S+                 G+  EG E           + ++ RQ +    S
Sbjct: 636 FVSVLSACSH----------------GGLADEGWE-----------IFRSMRQSYGIAPS 668

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            D     +   +    + G L +A    R M   +V P V+   ++L AC    +++ G+
Sbjct: 669 EDH----YACAVDVLGRAGWLADAEELIRCM---DVKPTVLVWKTLLGACRKYRDVDRGR 721

Query: 534 QLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
            L    +R L   D++ +V   L ++ + +G  + AA V  ++  + 
Sbjct: 722 -LANSMVRELDPGDESAYV--VLSNILAGAGKWDEAAEVRTEMESRG 765


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 247/820 (30%), Positives = 411/820 (50%), Gaps = 62/820 (7%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPT 69
           +PPPP    P PP L  + S   P P   TP        +    RP   R +  +   P 
Sbjct: 1   MPPPPARTHPNPPLLHLLASHRAPQPLPLTPA----HGHLPPRKRP---RGVGSAAAPPP 53

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKK------SSPYTSCDNYTYSSVLKACAETRNL 123
                +    +   +    A+  + Q+ +      SSP    D   Y ++ + C   R +
Sbjct: 54  PRAAASAEATYSDRSAALRALCSHGQLAQALWLLESSPEPP-DEGAYVALFRLCEWRRAV 112

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
             G       +R  +       +  L + +  LS L      +++ E+ ++      +VF
Sbjct: 113 DAG-------MRACARADAEHPSFGLRLGNAMLSML------VRFGEIWHA-----WRVF 154

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
             M  R+V +WN +V  Y K     EA+  +  ML  G+RP   +F  V      + D++
Sbjct: 155 AKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWR 214

Query: 244 SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
               V+  +++ G  + +++ V ++ + MYA+ G    ARK+FD     +   WN MI G
Sbjct: 215 MGREVHAHVLRFG--FGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           + +N+     +ELF+ +LE +E+  + +T  S   A   L E+   +++H + +K   A+
Sbjct: 273 HFENHECEAGLELFLTMLE-NEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 364 PVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            V   N++I+                    +D +SW  MIS + +NG  D+ L +   M+
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIK 462
                 D VT+ + L+A + L   DVG + H      G I +  + + L++MYAKS  I 
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A ++F+     ++D  +W++MIAG+  N    EA   FR ML H V PN VT  + L A
Sbjct: 452 KAIEVFKF--MAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSA 508

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C   G +  GK++H + +R  +    +V  +L+D+Y K G  +YA   F+   EK+ V++
Sbjct: 509 CAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSW 568

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             M+ G+  HG+ + ALSLF  M   G  PD +TFVA+L ACS AG+V +G ++F +M +
Sbjct: 569 NIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTE 628

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ I P+ +HY C+ D+L RVGK+ EAY  +  +  + +   +WG+LL  CR+H H EL 
Sbjct: 629 KFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA-AVWGALLNGCRIHRHVELG 687

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E+ AK +LE++  +    YHVLL ++Y + G W  V +VRK MRE+GL ++ GCSW++V 
Sbjct: 688 ELAAKVILELEPNDV--AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVK 745

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           G  + F + D+ HPQ  +I  +L  +   M+  G   +++
Sbjct: 746 GVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVES 785


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/755 (30%), Positives = 399/755 (52%), Gaps = 52/755 (6%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           + +SI    T  +N+++         ++ +  Y  M+K+  +T  D YT+ S+ KAC   
Sbjct: 5   IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKT--HTQLDAYTFPSLFKACTNL 62

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
                G ++H   +    +   ++ +SL++ Y+                   +    L  
Sbjct: 63  NLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYA------------------KFGCIHLGR 104

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFDTM +RNVV W TI+  Y +      A   F+ M   GI+P++++ +++ P +S L 
Sbjct: 105 KVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKL- 163

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                 ++    + +   + +DL +++S + MY + G    AR++F +   R+   WN++
Sbjct: 164 ----PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSL 219

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +  Y +     E ++L +Q +++++I  D  TF SALSA +   +L LG+ +H  ++K+ 
Sbjct: 220 LSAYSKIGATEEILQL-LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDG 278

Query: 361 V--------ALPVI------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +        AL V+            V  +  E+DVV W  MIS  VQN   D+ L + Y
Sbjct: 279 LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFY 338

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M +      + T+ + L+A + L   D+G   H Y+LR GI  +   ++ L+ MYAK  
Sbjct: 339 QMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCN 398

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            ++ +  IF  N   ++D  +WNA++AG+ +NG L +    F +M +  + P+ +T+ S+
Sbjct: 399 KLQQSCSIF--NKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSL 456

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC   G +  GK +H F +R  L   +   T+L+DMY K G +  A   F  + +++ 
Sbjct: 457 LQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDL 516

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V ++T+I+GYG +G  E AL  +    G G+EP+ + F++VLSACS+ GL+ +GL I++ 
Sbjct: 517 VAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYES 576

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M +++++ P+ EH  CV D+L R GKV EAY F K + +E +++ + G LL +CR++G  
Sbjct: 577 MTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIV-VLGMLLDACRVNGRV 635

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL +V+A+ + E+   +  PG  V L+N YA    W+ V+K   +MR  GL+K  G S I
Sbjct: 636 ELGKVIARDMFELKPVD--PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           +V G    F +    HP+  KI   ++ L+  +RN
Sbjct: 694 EVHGTTFTFFASHNSHPKIEKIILTVKALSKNIRN 728



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 261/557 (46%), Gaps = 50/557 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  HL R++FD++ +   V W TII  +        A  ++ QM++S         T  +
Sbjct: 98  GCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQP-----TSVT 152

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L        L +   +HC  I         + NS++NMY  C    DA           
Sbjct: 153 LLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADAR---------- 202

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F ++  R++V+WN+++S Y K     E ++  + M    I+P   +F + 
Sbjct: 203 --------RLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +  GD +   +V+GL++K G     D  V S+ + +Y    C D A K+F +  E+
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNI--DQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W  MI G VQN+   +A+ +F Q++E   +     T  S L+A +QL   D+G  +
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIE-SNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 353 HAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLD 392
           H Y+++  + L +                     + N ++E+D+VSWN +++   +NG  
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
            +G+    EM+K     DS+TVT+LL A  +      GK  H ++LR   I     E+ L
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETAL 491

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY K G ++ A++ F+      RD   W+ +I GY  NG  E A   + + L   + P
Sbjct: 492 VDMYFKCGNLENAQKCFDCML--QRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEP 549

Query: 512 NVVTIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N V   SVL AC+  G I  G  ++   +  + +  N+     ++D+ S++G ++ A + 
Sbjct: 550 NHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSF 609

Query: 571 FAKIPEKNSVTYTTMIL 587
           +  + ++ S+    M+L
Sbjct: 610 YKMMFKEPSIVVLGMLL 626


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 243/769 (31%), Positives = 407/769 (52%), Gaps = 61/769 (7%)

Query: 55  PHLARQLFDSIT-RPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           PH+A  LFD I  RPTT+   N ++  +  +    EA+ L+  +  SS     D  T S 
Sbjct: 41  PHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSS--LQPDESTLSC 98

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V   CA + + ++G+ VHC  ++        V  SL++MY             +K   V+
Sbjct: 99  VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMY-------------MKTENVN 145

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             +     +VFD M  RNVV+W ++++ Y     Y      F  M   G+ P+  +   V
Sbjct: 146 DGR-----RVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTV 200

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             AL + G       V+ ++VK G E    +F  +S I +Y+ LG    AR +FD    R
Sbjct: 201 IAALVNEGVVGIGLQVHAMVVKHGFEEAIPVF--NSLISLYSRLGMLRDARDVFDKMEIR 258

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN+MI GYV+N   +E  E+F + ++L  +    +TF S + + + L+EL L + +
Sbjct: 259 DWVTWNSMIAGYVRNGQDLEVFEIFNK-MQLAGVKPTHMTFASVIKSCASLRELALVKLM 317

Query: 353 HAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGL 391
               +K+      IV+ A++                      ++VVSW  MIS  +QNG 
Sbjct: 318 QCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGG 377

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY- 450
           +D+ + L  +M+++G   +  T +A+L+    +       + HA +++   ++E   S  
Sbjct: 378 NDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV----FVSEMHAEVIK--TNYERSSSVG 431

Query: 451 --LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
             L+D Y K G    A ++FE  ++  +D   W+AM+AGY Q G  EEA   F Q+++  
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEA--KDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEG 489

Query: 509 VTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           + PN  T +SV+ AC +P    E GKQ H ++I+  L+  + V ++L+ MY+K G I+ A
Sbjct: 490 IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSA 549

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF +  E++ V++ +MI GY QHG +++AL +F  M+   ++ DA+TF+ V++AC++A
Sbjct: 550 HEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV++G + F+ M  ++ I P+ +HY C+ D+  R G + +A   + E+        +W 
Sbjct: 610 GLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGA-TVWR 668

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LLG+ R+H + EL E+ A+KL+ +   +S    +VLLSN+YA  GNW+    VRK M +
Sbjct: 669 TLLGAARVHRNVELGELAAEKLISLQPEDSAA--YVLLSNMYAAAGNWQERTNVRKLMDK 726

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           R ++KE G SWI+V      F + D  HP S++IY  L  L++ +++AG
Sbjct: 727 RKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAG 775



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 216/460 (46%), Gaps = 61/460 (13%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           P   S +S   + G    AR +FD +     V WN++I G+V N    E   ++++M+ +
Sbjct: 230 PVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA 289

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
               +  + T++SV+K+CA  R L + K + C  ++      + V  +L+   S C    
Sbjct: 290 GVKPT--HMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMD 347

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           DA                    +F  M   +NVV+W  ++S  ++     +AV  F  M 
Sbjct: 348 DA------------------LSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMR 389

Query: 219 RMGIRPSTISFVNV----FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R G++P+  ++  +    +P   S      A+V+        + Y     V ++ +  Y 
Sbjct: 390 REGVKPNHFTYSAILTVHYPVFVS---EMHAEVI-------KTNYERSSSVGTALLDAYV 439

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           +LG    A K+F+    ++   W+ M+ GY Q     EA +LF Q+++ + I  ++ TF 
Sbjct: 440 KLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK-EGIKPNEFTFS 498

Query: 335 SALSA-VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
           S ++A  S     + G+Q HAY IK  +   + V +A++                    E
Sbjct: 499 SVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKE 558

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD+VSWN+MIS + Q+G   + L +  EMQK+   +D+VT   +++A ++    + G++ 
Sbjct: 559 RDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKY 618

Query: 434 HAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
              ++  H I+   M+ Y  +ID+Y+++G+++ A  I  +
Sbjct: 619 FNSMINDHHIN-PTMKHYSCMIDLYSRAGMLEKAMGIINE 657


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/638 (35%), Positives = 352/638 (55%), Gaps = 39/638 (6%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM-MLRMGIRPSTISFVNVFPALSSLGD 241
           FD ++ R+V AWN ++S Y +     E +R F + ML  G+ P   +F +V  A  ++ D
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
               + ++ L +K G  ++ D++VA+S I +Y+       AR +FD    R+   WN MI
Sbjct: 169 ---GNKIHCLALKFG--FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q+ +  EA+ L   +  +D      VT +S LSA ++  + + G  +H+Y IK+ +
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAMDS-----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + V N +I+                    RD++SWN++I A+  N      + L  E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSG 459
           M+      D +T+ +L S  S L +    +    + LR G   E +   + ++ MYAK G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIAS 518
           L+ +AR +F  N   + D  +WN +I+GY QNG   EA   +  M E   +  N  T  S
Sbjct: 399 LVDSARAVF--NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VLPAC+  G +  G +LHG  ++  L  +VFV TSL DMY K G +  A ++F +IP  N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           SV + T+I  +G HG  E+A+ LF+ M   G++PD ITFV +LSACS++GLVDEG   F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           +MQ +Y I PS +HY C+ DM GR G++  A +F+K +  + +   IWG+LL +CR+HG+
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA-SIWGALLSACRVHGN 635

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            +L ++ ++ L E++  +   GYHVLLSN+YA  G WE VD++R     +GLRK  G S 
Sbjct: 636 VDLGKIASEHLFEVEPEH--VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++V   V  F + +Q HP   ++Y  L  L  +++  G
Sbjct: 694 MEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 178/674 (26%), Positives = 301/674 (44%), Gaps = 112/674 (16%)

Query: 36  KLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
           +++   I ++L  + C  G   LAR  FD I       WN +I G+       E I  +S
Sbjct: 82  QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141

Query: 95  QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
               SS  T  D  T+ SVLKAC   R +  G  +HC  ++       +V  SL+++YS 
Sbjct: 142 LFMLSSGLTP-DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS- 196

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
                       +Y  V  ++      +FD M  R++ +WN ++S Y ++    EA    
Sbjct: 197 ------------RYKAVGNARI-----LFDEMPVRDMGSWNAMISGYCQSGNAKEA---- 235

Query: 215 RMMLRMGIRP-STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
            + L  G+R   +++ V++  A +  GD+     ++   +K G E  ++LFV++  I +Y
Sbjct: 236 -LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE--SELFVSNKLIDLY 292

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           AE G     +K+FD    R+   WN++I  Y  N  P+ AI LF Q + L  I  D +T 
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF-QEMRLSRIQPDCLTL 351

Query: 334 LSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVI-------------------- 372
           +S  S +SQL ++   + +  + + K +    + + NAV+                    
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGK 431
             DV+SWNT+IS + QNG   E + +   M+++G    +  T  ++L A S       G 
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           + H  LL++G++ +  + + L DMY K G ++ A  +F +      +   WN +IA +  
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGF 529

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +G  E+A + F++ML+  V P+ +T  ++L AC                           
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC--------------------------- 562

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTTMILGYGQHGMSERALSLFRSM 605
                   S SG+++     F  +     +T     Y  M+  YG+ G  E AL   +SM
Sbjct: 563 --------SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH---YCCVADMLGR 662
               ++PDA  + A+LSAC   G VD G      +  E+  +   EH   +  +++M   
Sbjct: 615 S---LQPDASIWGALLSACRVHGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYAS 666

Query: 663 VGKVVEAYEFVKEL 676
            GK    +E V E+
Sbjct: 667 AGK----WEGVDEI 676



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 260/520 (50%), Gaps = 37/520 (7%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +SA  ++  LV   S+ + ++ +++  + +Y  LG    AR  FD+   R+   WN M
Sbjct: 66  NLQSAKCLHARLVV--SKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE--------LDLGQQL 352
           I GY +  +  E I  F   +    +  D  TF S L A   + +        L  G   
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW 183

Query: 353 HAYIIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             Y+  + + L           I+ + +  RD+ SWN MIS + Q+G   E L L   ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
                +DSVTV +LLSA +   + + G   H+Y ++HG+  E  + + LID+YA+ G ++
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
             +++F++     RD  +WN++I  Y  N     A   F++M    + P+ +T+ S+   
Sbjct: 300 DCQKVFDRMYV--RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357

Query: 523 CNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            + +G+I   + + GF++R  + L +++ +G +++ MY+K G+++ A  VF  +P  + +
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFL-EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           ++ T+I GY Q+G +  A+ ++  M+  G I  +  T+V+VL ACS AG + +G+++   
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           + +   +         +ADM G+ G++ +A     ++    +V   W +L+     HGH 
Sbjct: 477 LLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV--PWNTLIACHGFHGHG 533

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNI----YAEEGNW 735
           E A ++ K++L+   +     +  LLS        +EG W
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 196/435 (45%), Gaps = 39/435 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR    +++FD +     + WN+II  +  N  P  AI L+ +M+ S     C   T  S
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC--LTLIS 353

Query: 113 VLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +    ++  ++R  ++V    +R  +      + N+++ MY+          +GL    V
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK---------LGL----V 400

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
           D ++      VF+ +   +V++WNTI+S Y +     EA+  + +M   G I  +  ++V
Sbjct: 401 DSAR-----AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V PA S  G  +    ++G L+K G  Y+ D+FV +S   MY + G  + A  +F    
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGL-YL-DVFVVTSLADMYGKCGRLEDALSLFYQIP 513

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             N+  WNT+I  +  + H  +A+ LF ++L+ + +  D +TF++ LSA S    +D GQ
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQ 572

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                +  ++   P           +  +  M+  + + G  +  L  +  M  Q    D
Sbjct: 573 WCFEMMQTDYGITP----------SLKHYGCMVDMYGRAGQLETALKFIKSMSLQP---D 619

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE- 469
           +    ALLSA     N D+GK    +L        G    L +MYA +G  +   +I   
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679

Query: 470 KNDSGDRDQATWNAM 484
            +  G R    W++M
Sbjct: 680 AHGKGLRKTPGWSSM 694


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/649 (34%), Positives = 355/649 (54%), Gaps = 37/649 (5%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y   D   +VF+ + ++  V + T++  + K     +A++ F  M    + P   +F  +
Sbjct: 82  YGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYL 141

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                   + +    ++GLLVK G  +  DLF  +    MYA+      ARK+FD   ER
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSG--FSLDLFAMTGLENMYAKCRQVHEARKVFDRMPER 199

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT++ GY QN     A+E+ V ++  + +    +T +S L AVS L+ + +G+++
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEM-VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEI 258

Query: 353 HAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H Y ++  F +L  I                   + + ++ER+VVSWN+MI A+VQN   
Sbjct: 259 HGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENP 318

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-----GM 447
            E +++  +M  +G     V+V   L A ++L + + G+  H    +  +  E      +
Sbjct: 319 KEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH----KLSVELELDRNVSV 374

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + LI MY K   + TA  +F K  S  R   +WNAMI G+ QNG   EA   F QM   
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQS--RTIVSWNAMILGFAQNGRPIEALNYFSQMQAR 432

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V P+  T  SV+ A   +      K +HG  +R  LD+NVFV T+L+DMY+K G I  A
Sbjct: 433 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA 492

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  + E++  T+  MI GYG HG+ + AL LF  M+   I P+ +TF++V+SACS++
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHS 552

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+ GL+ F +M++ Y I+PS +HY  + D+LGR G++ EA++F+ ++  +  V  ++G
Sbjct: 553 GLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV-NVYG 611

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           ++LG+C++H +   AE VA++L E++  +   GYHVLL+NIY     WE V +VR  M  
Sbjct: 612 AMLGACQIHKNVNFAEKVAERLFELNPEDG--GYHVLLANIYRAASMWEKVGQVRVSMLR 669

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +GLRK  GCS +++   V+ F S    HP S KIY  LE+L  +++ AG
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAG 718



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/568 (29%), Positives = 284/568 (50%), Gaps = 47/568 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S  C+ G    A ++F+ I +   V++ T++ GF   +   +A+  + +M+        
Sbjct: 76  VSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVV 135

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            N+TY  +LK C +   LR+GK +H   ++   +   F    L NMY+ C    +A    
Sbjct: 136 YNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEAR--- 190

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          KVFD M  R++V+WNTIV+ Y +      A+    +M    ++PS
Sbjct: 191 ---------------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPS 235

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+ V+V PA+S+L   +    ++G  ++ G + + +  +A++ + MYA+ G    AR +
Sbjct: 236 FITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN--IATALVDMYAKCGSLKTARLL 293

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD  LERN   WN+MI  YVQN +P EA+ +F ++L+ + +   DV+ + AL A + L +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLD-EGVKPTDVSVMGALHACADLGD 352

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           L+ G+ +H   ++  +   V V+N++I                     R +VSWN MI  
Sbjct: 353 LERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILG 412

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F QNG   E L    +MQ +    D+ T  ++++A + L      K  H  ++R+ +   
Sbjct: 413 FAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKN 472

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L+DMYAK G I  AR IF+     +R   TWNAMI GY  +G+ + A   F +M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTTWNAMIDGYGTHGIGKAALELFEEM 530

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
            +  + PN VT  SV+ AC+  G +E G K  H     Y ++ ++    +++D+  ++G 
Sbjct: 531 QKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGR 590

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQ 591
           +N A +   ++P K +V     +LG  Q
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQ 618



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 21/215 (9%)

Query: 27  IHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           IH LS  +        + S +S  C+      A  +F  +   T V WN +I+GF  N  
Sbjct: 359 IHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGR 418

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
           P EA+  +SQM+  +     D +TY SV+ A AE       K +H   +R   + + FV 
Sbjct: 419 PIEALNYFSQMQART--VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVT 476

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            +L++MY+ C + + A +                  +FD M  R+V  WN ++  Y    
Sbjct: 477 TALVDMYAKCGAIMIARL------------------IFDMMSERHVTTWNAMIDGYGTHG 518

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
               A+  F  M +  IRP+ ++F++V  A S  G
Sbjct: 519 IGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%)

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L Q     T L+ ++ + G ++ AA VF  I +K +V Y TM+ G+ +    ++AL  F 
Sbjct: 65  LYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFV 124

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            M+   +EP    F  +L  C     +  G +I  L+
Sbjct: 125 RMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 232/713 (32%), Positives = 381/713 (53%), Gaps = 59/713 (8%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L  C   +N+  G+ +H   ++  S  S +V N+ LN+Y+                + ++
Sbjct: 18  LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYA----------------KTNH 61

Query: 174 SKYDLVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVE---AVRQFRMMLRMG-IRPSTI 227
             + L   +FD++    ++ V+WN++++ + +         A+  FR M+R   + P+  
Sbjct: 62  LSHALT--LFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAH 119

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +   VF A S+L D  +    + + VK G     D++V SS + MY + G    ARK+FD
Sbjct: 120 TLAGVFSAASNLSDVVAGKQAHSVAVKTGCS--GDVYVGSSLLNMYCKTGFVFDARKLFD 177

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERNT  W TMI GY  ++   +A+E+F +++  +E + ++    S LSA++    + 
Sbjct: 178 RMPERNTVSWATMISGYASSDIADKAVEVF-ELMRREEEIQNEFALTSVLSALTSDVFVY 236

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+Q+H+  IKN +   V V NA++                    +++ ++W+ M++ + 
Sbjct: 237 TGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYA 296

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           Q G  D+ L L  +M   G +    T+  +++A S+L     GKQ H++  + G    G+
Sbjct: 297 QGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGF---GL 353

Query: 448 ESYL----IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           + Y+    +DMYAK G +  AR+ FE       D   W ++I GY QNG  E     + +
Sbjct: 354 QLYVLSAVVDMYAKCGSLADARKGFECVQQ--PDVVLWTSIITGYVQNGDYEGGLNLYGK 411

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M    V PN +T+ASVL AC+ +  ++ GKQ+H   I+Y     V +G++L  MY+K G 
Sbjct: 412 MQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGS 471

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++    +F ++P ++ +++  MI G  Q+G   +AL LF  M   GI+PD +TFV +LSA
Sbjct: 472 LDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSA 531

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+ GLVD G + F +M  E+ I P  EHY C+ D+L R GK+ EA EF+ E     + L
Sbjct: 532 CSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFI-ESATVDHGL 590

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +W  LLG+C+ H + EL     +KL+E+ +  S    +VLLS+IY   G+ ENV++VR+
Sbjct: 591 CLWRILLGACKNHRNYELGVYAGEKLVELGSPESSA--YVLLSSIYTALGDRENVERVRR 648

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M+ RG+ KE GCSWI++ G V+ F   D +HPQ  +I   LE L   M + G
Sbjct: 649 IMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEG 701



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 270/562 (48%), Gaps = 59/562 (10%)

Query: 58  ARQLFDSITR--PTTVIWNTIIIGFVCNNLPYE---AILLYSQMKKSSPYTSCDNYTYSS 112
           A  LFDSI       V WN++I  F  N+       AI L+ +M +++     + +T + 
Sbjct: 65  ALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIP-NAHTLAG 123

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V  A +   ++  GK  H   ++   +   +V +SLLNMY       DA           
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDAR---------- 173

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   K+FD M  RN V+W T++S Y  ++   +AV  F +M R     +  +  +V
Sbjct: 174 --------KLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSV 225

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             AL+S     +   V+ L +K G   +  + VA++ + MYA+ G  D A + F+   ++
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKNGLLAI--VSVANALVTMYAKCGSLDDAVRTFEFSGDK 283

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N+  W+ M+ GY Q     +A++LF + +    ++  + T +  ++A S L  +  G+Q+
Sbjct: 284 NSITWSAMVTGYAQGGDSDKALKLFNK-MHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342

Query: 353 HAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLD 392
           H++  K    L + VL+AV++                     DVV W ++I+ +VQNG  
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDY 402

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           + GL L  +MQ +  + + +T+ ++L A S+L   D GKQ HA ++++G   E  + S L
Sbjct: 403 EGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSAL 462

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
             MY K G +     IF +  S  RD  +WNAMI+G +QNG   +A   F +ML   + P
Sbjct: 463 SAMYTKCGSLDDGYLIFWRMPS--RDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKP 520

Query: 512 NVVTIASVLPACNPMGNIELGKQ-----LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           + VT  ++L AC+ MG ++ G +        F+I  +++        ++D+ S++G +N 
Sbjct: 521 DPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHY----ACMVDILSRAGKLNE 576

Query: 567 AANVFAKIPEKNSVTYTTMILG 588
           A          + +    ++LG
Sbjct: 577 AKEFIESATVDHGLCLWRILLG 598



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 231/511 (45%), Gaps = 48/511 (9%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    AR+LFD +    TV W T+I G+  +++  +A+ ++  M++     
Sbjct: 158 SLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQ 217

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             + +  +SVL A      +  G+ VH   I+        V N+L+ MY+ C S  DA  
Sbjct: 218 --NEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDA-- 273

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            + F+    +N + W+ +V+ Y +     +A++ F  M   G+ 
Sbjct: 274 ----------------VRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  + V V  A S L        ++    KLG  +   L+V S+ + MYA+ G    AR
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG--FGLQLYVLSAVVDMYAKCGSLADAR 375

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K F+   + +  +W ++I GYVQN      + L+ + ++++ ++ +++T  S L A S L
Sbjct: 376 KGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGK-MQMERVIPNELTMASVLRACSSL 434

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             LD G+Q+HA IIK    L V + +A+                      RDV+SWN MI
Sbjct: 435 AALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMI 494

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   QNG  ++ L L  +M  +G   D VT   LLSA S++   D G +    +      
Sbjct: 495 SGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNI 554

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
              +E Y  ++D+ +++G +  A++  E + + D     W  ++     +   E    A 
Sbjct: 555 APMVEHYACMVDILSRAGKLNEAKEFIE-SATVDHGLCLWRILLGACKNHRNYELGVYAG 613

Query: 502 RQMLEHNV--TPNVVTIASVLPACNPMGNIE 530
            +++E     +   V ++S+  A     N+E
Sbjct: 614 EKLVELGSPESSAYVLLSSIYTALGDRENVE 644


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/754 (29%), Positives = 398/754 (52%), Gaps = 52/754 (6%)

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
           S   P T  +N II          + +L YS M  +   T  D +T+ S++KAC      
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTD--TPPDAHTFPSLVKACTSLDLF 64

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
             G + H   I    +   ++  SL+N YS    +  A                   KVF
Sbjct: 65  SHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSAR------------------KVF 106

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
           DTM  RNVV W T++  Y +   +  A   + +M R GI+PS+++ + +   LS + +  
Sbjct: 107 DTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL---LSGVLELV 163

Query: 244 SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
               ++  +++ G  + +D+ +A+S + +Y + G  + A+ +F+    R+   WN+++ G
Sbjct: 164 HLQCLHACVIQYG--FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSG 221

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
           Y Q  +  E ++L ++ ++ D I  D  TF S +SA +   +L +G+ +H +I++     
Sbjct: 222 YAQLGNIREVLQLLIR-MKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQ 280

Query: 359 -NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            + +   +I              +   ++ +DV+SW  MIS  VQN   D  + +   M 
Sbjct: 281 DSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML 340

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
           K   M  + T+ ++L+A + L +  +G   H Y+LR  I  +   ++ L+ MYAK G ++
Sbjct: 341 KSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLE 400

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            +  +F++     RD  +WNA+++G+ QNG L +A + F +M +    P+ +T+ S+L A
Sbjct: 401 QSCSVFDRMSR--RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +G +  GK +H F  +  L   + + T+L+DMYSK G +  A   F ++P+++ V++
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           +++I GYG HG  E AL ++      GI+P+ + ++++LSACS+ GLVD+GL  F  M +
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ I+P  EH  C+ D+L R G+V EAY F K +  + + +++ G LL +CR  G+ EL 
Sbjct: 579 DFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPS-MDVLGILLDACRTTGNVELG 637

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           ++VA++++ +   N+  G +V L++ YA    W+ V +V  +M+   L+K  G S+I++ 
Sbjct: 638 DIVAREIVILKPANA--GNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELH 695

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           G +  F +    HPQ  +I  +L+ L  EMR  G
Sbjct: 696 GTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 262/560 (46%), Gaps = 56/560 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR++FD++     V W T+I  +        A  +Y+ M++     S  + T   
Sbjct: 97  GHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPS--SVTMLG 154

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L    E  +L   + +H   I+        + NS+LN+Y  C    DA+          
Sbjct: 155 LLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQ---------- 201

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F+ M  R+V++WN++VS Y +     E ++    M   GI P   +F ++
Sbjct: 202 --------ALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSL 253

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +         +V+G +++ G E   D  + +S I MY + G  + A +IF+  + +
Sbjct: 254 VSAAAMQSKLGVGKMVHGHILRAGLE--QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  MI G VQN+    A+ +F ++L+   ++    T  S L+A ++L    LG  +
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSV 370

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H YI++  + L +   N+++                     RD+VSWN ++S   QNG  
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG----ME 448
            + L+L  EM+K     DS+TV +LL A +++     GK  H ++ +  +   G    ++
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCL---GPCILID 487

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+DMY+K G + +A++ F++     +D  +W+++IAGY  +G  E A   +   L   
Sbjct: 488 TALVDMYSKCGDLGSAQKCFDRMP--QQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTG 545

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           + PN V   S+L AC+  G ++ G    H  +  + ++  +     ++D+ S++G +  A
Sbjct: 546 IQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605

Query: 568 ANVFAKIPEKNSVTYTTMIL 587
            + + ++  K S+    ++L
Sbjct: 606 YSFYKRMFPKPSMDVLGILL 625



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 221/509 (43%), Gaps = 77/509 (15%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ GR   A+ LF+ +     + WN+++ G+       E + L  +MK      
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDG--I 243

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D  T+ S++ A A    L +GK VH H +R        +  SL+ MY  C        
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC-------- 295

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                        +   ++F+ M  ++V++W  ++S  V+ +    AV  FR ML+  + 
Sbjct: 296 ----------GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVM 345

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PST +  +V  A + LG +     V+G +++       D+   +S + MYA+ G  + + 
Sbjct: 346 PSTATIASVLAACAELGSFPLGTSVHGYILR--QRIKLDIPSQNSLVTMYAKCGHLEQSC 403

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD    R+   WN ++ G+ QN H  +A+ LF ++ +  +   D +T +S L A + +
Sbjct: 404 SVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP-DSITVVSLLQACASI 462

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             L  G+ +H ++ K+ +   +++  A++                    ++D+VSW+++I
Sbjct: 463 GALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSII 522

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + +  +G  +  L +  +    G   + V   ++LSA S           H  L+  G+ 
Sbjct: 523 AGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS-----------HNGLVDQGLS 571

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           F    S   D   +  L   A                   ++   ++ G +EEA+  +++
Sbjct: 572 F--FHSMTKDFGIEPRLEHRA------------------CIVDLLSRAGRVEEAYSFYKR 611

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELG 532
           M      P++  +  +L AC   GN+ELG
Sbjct: 612 MFP---KPSMDVLGILLDACRTTGNVELG 637



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           KL  P+  S ++   + G    +  +FD ++R   V WN I+ G   N    +A+LL+++
Sbjct: 380 KLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNE 439

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M+K+      D+ T  S+L+ACA    L  GK +H    +    P   +  +L++MYS C
Sbjct: 440 MRKARQRP--DSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKC 497

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                A+                  K FD M ++++V+W++I++ Y    +   A+R + 
Sbjct: 498 GDLGSAQ------------------KCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYS 539

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
             L  GI+P+ + ++++  A S  G
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNG 564


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/555 (36%), Positives = 325/555 (58%), Gaps = 55/555 (9%)

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+T  W   +    ++N   EAI  +++ + +     D+  F + L AVS LQ+L  G+Q
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIE-MTVSGARPDNFAFPAVLKAVSGLQDLKTGEQ 113

Query: 352 LHAYIIK-NFVALPVIVLNAVI-------------------------------------- 372
           +HA  +K  + +  V V N ++                                      
Sbjct: 114 IHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFES 173

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
             +RD+VSWNTMIS+F Q+    E L     M  +G  +D VT+ ++L A S+L   DVG
Sbjct: 174 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 431 KQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           K+ HAY+LR+    E   + S L+DMY     +++ R++F+ +  G R +  WNAMI+GY
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFD-HILGRRIE-LWNAMISGY 291

Query: 489 TQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQ 546
            +NGL E+A + F +M++   + PN  T+ASV+PAC + +  I  GK++H ++IR +L  
Sbjct: 292 ARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLAS 351

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM- 605
           ++ VG++L+DMY+K G +N +  VF ++P KN +T+  +I+  G HG  E AL LF++M 
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411

Query: 606 ----KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
               +G   +P+ +TF+ V +ACS++GL+ EGL +F  M+ ++ ++P+++HY CV D+LG
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLG 471

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G++ EAYE V  +  E + +  W SLLG+CR+H + EL EV AK LL ++   ++  +
Sbjct: 472 RAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP--NVASH 529

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VLLSNIY+  G W    +VRK MR+ G++KE GCSWI+    V++F + D  HPQS ++
Sbjct: 530 YVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQL 589

Query: 782 YEMLERLAMEMRNAG 796
           +  LE L+ +MR  G
Sbjct: 590 HGFLETLSEKMRKEG 604



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 128/547 (23%), Positives = 247/547 (45%), Gaps = 85/547 (15%)

Query: 13  PPPTATPPPP--QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTT 70
           PP   T PPP  Q P    L+   P    PT  SR                       +T
Sbjct: 23  PPSLQTQPPPSIQKPTASPLTSKTPP--KPTSPSR-----------------------ST 57

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
             W   +     +N   EAI  Y +M  S      DN+ + +VLKA +  ++L+ G+ +H
Sbjct: 58  ASWVDALRSRTRSNDFREAISTYIEMTVSGARP--DNFAFPAVLKAVSGLQDLKTGEQIH 115

Query: 131 CHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKYVEVDYSKYDLVCKVFDTMR 187
              ++  + + S  V N+L+NMY  C    D       L  +     + D    +F++  
Sbjct: 116 AAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFV 175

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            R++V+WNT++S + +++R+ EA+  FR+M+  G+    ++  +V PA S L        
Sbjct: 176 DRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKE 235

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  +++  ++ + + FV S+ + MY      +  R++FD+ L R  E+WN MI GY +N
Sbjct: 236 IHAYVLR-NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSA-VSQLQELDLGQQLHAYIIKNFVALPVI 366
               +A+ LF++++++  ++ +  T  S + A V  L  +  G+++HAY I+N +A  + 
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V +A+++                    ++V++WN +I A   +G  +E L L   M  + 
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414

Query: 407 -----FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-------HFEGME------ 448
                   + VT   + +A S           H+ L+  G+       H  G+E      
Sbjct: 415 GRGGEAKPNEVTFITVFAACS-----------HSGLISEGLNLFYRMKHDHGVEPTSDHY 463

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + ++D+  ++G ++ A ++     +       W++++     +  +E   VA + +L  +
Sbjct: 464 ACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLL--H 521

Query: 509 VTPNVVT 515
           + PNV +
Sbjct: 522 LEPNVAS 528



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 28/213 (13%)

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           K  S  R  A+W   +   T++    EA   + +M      P+     +VL A + + ++
Sbjct: 49  KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108

Query: 530 ELGKQLHGFSIRYL---------------------LDQNVFVGTSLIDMYSKSGVINYAA 568
           + G+Q+H  ++++                      +    F   +L+ MY+K G ++ + 
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSK 168

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F    +++ V++ TMI  + Q      AL+ FR M   G+E D +T  +VL ACS+  
Sbjct: 169 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 228

Query: 629 LVDEGLQIF-------DLMQQEYKIQPSTEHYC 654
            +D G +I        DL++  +      + YC
Sbjct: 229 RLDVGKEIHAYVLRNNDLIENSFVGSALVDMYC 261


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 237/728 (32%), Positives = 381/728 (52%), Gaps = 57/728 (7%)

Query: 107 NYTYSSVLKA---CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           ++ +  VL+A   C   + LR G+A+H   +   S  S  + NSL+N+Y+ C        
Sbjct: 7   SHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKC-------- 58

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY---VEAVRQFR--MML 218
                    +SK +LV   FD++  ++VV+WN +++ + + + +   +  +  FR  +M 
Sbjct: 59  -------SHFSKANLV---FDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMA 108

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
              I P+  +   VF A S+L D ++    + L VK    +  D+F ASS + MY + G 
Sbjct: 109 HKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSH--DVFAASSLLNMYCKTGL 166

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD--VTFLSA 336
              AR +FD   ERN   W TMI GY       EA ELF +++  +E   ++    F S 
Sbjct: 167 VFEARDLFDEMPERNAVSWATMISGYASQELADEAFELF-KLMRHEEKGKNENEFVFTSV 225

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           LSA++    ++ G+Q+H+  +KN +   V V NA++                     ++ 
Sbjct: 226 LSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNS 285

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           ++W+ M++ F Q G  D+ L L Y+M + G +    T+  +++A S+      G+Q H Y
Sbjct: 286 ITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGY 345

Query: 437 LLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            L+ G   +  + S L+DMYAK G I  AR+ FE       D   W ++I GY QNG  E
Sbjct: 346 SLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQ--PDVVLWTSIITGYVQNGDYE 403

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
            A   + +M    V PN +T+ASVL AC+ +  ++ GKQ+H   I+Y     + +G++L 
Sbjct: 404 GALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALS 463

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MY+K G ++    +F ++P ++ +++  MI G  Q+G     L LF  M   G +PD +
Sbjct: 464 AMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNV 523

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TFV +LSACS+ GLVD G   F +M  E+ I P+ EHY C+ D+L R GK+ EA EF+ E
Sbjct: 524 TFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFI-E 582

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
                + L +W  LL + + H   +L     +KL+E+ +  S    +VLLS+IY   G W
Sbjct: 583 SATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSA--YVLLSSIYTALGKW 640

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           E+V++VR  M+ RG+ KE GCSWI++    + F   D  HPQ  +I   L+ L   M++ 
Sbjct: 641 EDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDE 700

Query: 796 GNKTIQNS 803
           G + + +S
Sbjct: 701 GYQPLLDS 708



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 236/502 (47%), Gaps = 51/502 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV---CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A  +FDSI     V WN +I  F     +      + L+ Q+  +      + +T + V 
Sbjct: 64  ANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVF 123

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            A +   + R G+  H   ++   +   F  +SLLNMY            GL +   D  
Sbjct: 124 TAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCK---------TGLVFEARD-- 172

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR--MGIRPSTISFVNV 232
                  +FD M  RN V+W T++S Y   E   EA   F++M     G   +   F +V
Sbjct: 173 -------LFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSV 225

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             AL+      +   V+ L +K G   V  + VA++ + MY + G  + A K F+    +
Sbjct: 226 LSALTCYMLVNTGRQVHSLAMKNG--LVCIVSVANALVTMYVKCGSLEDALKTFELSGNK 283

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N+  W+ M+ G+ Q     +A++LF  + +  E+   + T +  ++A S    +  G+Q+
Sbjct: 284 NSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP-SEFTLVGVINACSDACAIVEGRQM 342

Query: 353 HAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLD 392
           H Y +K    L + VL+A+++                     DVV W ++I+ +VQNG D
Sbjct: 343 HGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNG-D 401

Query: 393 DEGLMLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
            EG + +Y +MQ  G + + +T+ ++L A SNL   D GKQ HA ++++    E  + S 
Sbjct: 402 YEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSA 461

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L  MYAK G +    +IF +  +  RD  +WNAMI+G +QNG   E    F +M      
Sbjct: 462 LSAMYAKCGSLDDGYRIFWRMPA--RDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTK 519

Query: 511 PNVVTIASVLPACNPMGNIELG 532
           P+ VT  ++L AC+ MG ++ G
Sbjct: 520 PDNVTFVNLLSACSHMGLVDRG 541



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 213/466 (45%), Gaps = 44/466 (9%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    AR LFD +     V W T+I G+    L  EA  L+  M+      
Sbjct: 156 SLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGK 215

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           + + + ++SVL A      +  G+ VH   ++        V N+L+ MY  C S  DA  
Sbjct: 216 NENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDA-- 273

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            K F+    +N + W+ +V+ + +     +A++ F  M + G  
Sbjct: 274 ----------------LKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL 317

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  + V V  A S          ++G  +KLG E    L+V S+ + MYA+ G    AR
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYEL--QLYVLSALVDMYAKCGSIVDAR 375

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K F+   + +  +W ++I GYVQN     A+ L+ + ++L  ++ +D+T  S L A S L
Sbjct: 376 KGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGK-MQLGGVIPNDLTMASVLKACSNL 434

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             LD G+Q+HA IIK   +L + + +A+                      RDV+SWN MI
Sbjct: 435 AALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMI 494

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   QNG  +EGL L  +M  +G   D+VT   LLSA S++   D G      +      
Sbjct: 495 SGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNI 554

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
              +E Y  ++D+ +++G +  A++  E + + D     W  ++A 
Sbjct: 555 APTVEHYACMVDILSRAGKLHEAKEFIE-SATVDHGLCLWRILLAA 599


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 216/648 (33%), Positives = 356/648 (54%), Gaps = 31/648 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF  +  +    ++T++  Y +     +AV  F  M   G+RP   +F  +        
Sbjct: 130 RVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNA 189

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D +    ++  L+  G  + +++F  +  + MYA+    + A K+FD   ER+   WNT+
Sbjct: 190 DLRKGKEIHCQLIVNG--FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTI 247

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-- 358
           I GY QN     A+EL +++ E  +   D +T +S L AV+ +  L +G+ +H Y ++  
Sbjct: 248 ISGYAQNGFGKTALELVLRMQEEGKRP-DSITIVSILPAVADVGSLRIGRSIHGYSMRAG 306

Query: 359 --NFVALPV----------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
             +FV +                  ++ + +  + VVSWN+MI  +VQNG     + +  
Sbjct: 307 FESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQ 366

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL--LRHGIHFEGMESYLIDMYAKS 458
           +M  +   + +VTV   L A ++L + + G+  H  L  L  G     M S LI MY+K 
Sbjct: 367 KMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNS-LISMYSKC 425

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             +  A +IFE  +   +   +WNAMI GY QNG + EA   F +M   N+ P+  T+ S
Sbjct: 426 KRVDIAAEIFE--NLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVS 483

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           V+PA   +  +   K +HG  IR  LD+NVFV T+L+DMY+K G ++ A  +F  + E++
Sbjct: 484 VIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH 543

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
             T+  MI GYG HG+ + AL LF  MK   I+P+ +TF+ VLSACS++GLV+EG Q F 
Sbjct: 544 VTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFG 603

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M+++Y ++P+ +HY  + D+LGR  ++ EA++F++++  E   + ++G++LG+CR+H +
Sbjct: 604 SMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIE-PAISVFGAMLGACRIHKN 662

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            EL E  A ++ ++D  +   GYHVLL+NIYA    W+ V +VR  M ++G++K  G S 
Sbjct: 663 VELGEKAANRIFDLDPDDG--GYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSV 720

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           +++   V+ F S    HPQ+ KIY  LE L   ++ AG     NS  D
Sbjct: 721 VELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHD 768



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 284/566 (50%), Gaps = 49/566 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S  C+ G  H A ++F  I      +++T++ G+  N+   +A+  + +M+        
Sbjct: 116 VSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVV 175

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            N+TY  +LK C +  +LR GK +HC  I      + F    ++NMY+ C          
Sbjct: 176 YNFTY--LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKC---------- 223

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
            + VE  Y       K+FD M  R++V WNTI+S Y +      A+     M   G RP 
Sbjct: 224 -RLVEEAY-------KMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPD 275

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSE-YVNDLFVASSAIFMYAELGCFDFARK 284
           +I+ V++ PA++ +G  +    ++G  ++ G E +VN   V+++ + MY++ G    AR 
Sbjct: 276 SITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVN---VSTALVDMYSKCGSVGTARL 332

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           IFD    +    WN+MI GYVQN  P  A+E+F ++++ +++   +VT + AL A + L 
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD-EQVEMTNVTVMGALHACADLG 391

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
           +++ G+ +H  + +  +   V V+N++I                     + +VSWN MI 
Sbjct: 392 DVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMIL 451

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + QNG  +E +    +MQ Q    DS T+ +++ A + L      K  H  ++R  +  
Sbjct: 452 GYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDK 511

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+DMYAK G + TAR++F+  D  +R   TWNAMI GY  +GL + A   F +
Sbjct: 512 NVFVATALVDMYAKCGAVHTARKLFDMMD--ERHVTTWNAMIDGYGTHGLGKAALELFEK 569

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSG 562
           M +  + PN VT   VL AC+  G +E G Q  G     Y L+  +    +++D+  ++ 
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRAN 629

Query: 563 VINYAANVFAKIPEKNSVTYTTMILG 588
            +N A +   K+P + +++    +LG
Sbjct: 630 RLNEAWDFIQKMPIEPAISVFGAMLG 655



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 517 ASVLPACNPMGNIELGKQLHGFS---IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           A +L  C  M      K+LH F    I+  L       T L+ ++ K G ++ AA VF  
Sbjct: 81  AILLELCTSM------KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQP 134

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I +K    Y TM+ GY ++   + A+S F  M+  G+ P    F  +L  C     + +G
Sbjct: 135 IEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKG 194

Query: 634 LQI 636
            +I
Sbjct: 195 KEI 197


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 231/698 (33%), Positives = 377/698 (54%), Gaps = 49/698 (7%)

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           R G+A+H   ++  +     V NSL+N YS    SL   ++   +             VF
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYS----SLPRPLLAAAFA------------VF 72

Query: 184 DTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLG 240
           D +    R+V +WN++++  +   R ++A+ +FR ML    + PS  SF   F A +   
Sbjct: 73  DDIPPAARDVASWNSLLN-PLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAA 131

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
              +    + L  K+ S  V++++V +S + MY +LG    AR++FD   +RN+  W+TM
Sbjct: 132 SAPAGTAAHALACKIPSA-VSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTM 190

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY       EA +LF  +LE       +    + LSAVS    L +G+Q+H  I+K+ 
Sbjct: 191 VAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDG 250

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   V V N+++                    ER+ ++W+ MI+ + QNG  D  + +  
Sbjct: 251 LLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M   GF     T   +L+A+S+L    VGKQ H  +++ G   +  ++S L+DMYAK G
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCG 370

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A++ F++    + D   W AM++G+ QNG  EEA   + +M +  + P+  TIAS 
Sbjct: 371 CIADAKEGFDQ--LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASG 428

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +  +E GKQLH   ++Y L     VG++L  MYSK G +    +VF +IP+++ 
Sbjct: 429 LRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDV 488

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + ++I G+ Q+G    AL LF  MK  G  PD ITF+ +L ACS+ GLVD G + F L
Sbjct: 489 IAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSL 548

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGH 698
           M ++Y + P  +HY C+ D+L R G + EA +F++ +  + G  L  W  +LG+CR    
Sbjct: 549 MTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCL--WRIVLGACRSLRD 606

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ++     ++L+E+ TR+S    ++LLSNIYA +  W +V++VR  MR RG+ K+ GCSW
Sbjct: 607 FDVGAYAGERLMELGTRDS--SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSW 664

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +++   V+ F   +Q+HP++  I   L RLA  M++ G
Sbjct: 665 VELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEG 702



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 222/466 (47%), Gaps = 46/466 (9%)

Query: 28  HSLSPPIPKLKTPT--IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           H+L+  IP   +      S L+  C+ G    AR++FD + +  +  W+T++ G+     
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             EA  L+  M +  P    + +  ++VL A +    L +G+ +H   ++        V 
Sbjct: 200 SEEAFDLFRLMLEECPSEKSE-FVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSL+ MY+       A  +G  +             VF++ R RN + W+ +++ Y +  
Sbjct: 259 NSLVTMYAK------AGCMGAAF------------HVFESSRERNSITWSAMITGYAQNG 300

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
               AV  F  M   G  P+  +FV V  A S LG        +GL+VKLG E    ++V
Sbjct: 301 EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV--QIYV 358

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            S+ + MYA+ GC   A++ FD   E +  +W  M+ G+VQN    EA+ L+ + ++ + 
Sbjct: 359 KSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYAR-MDKEG 417

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL--PV------------------ 365
           I+    T  S L A + +  L+ G+QLH  I+K  + L  PV                  
Sbjct: 418 IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGM 477

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V   + +RDV++WN++IS F QNG  +  L L  EM+ +G + D++T   +L A S++ 
Sbjct: 478 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMG 537

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
             D G +  + + +       ++ Y  ++D+ +++G++K A+   E
Sbjct: 538 LVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 583


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 240/766 (31%), Positives = 391/766 (51%), Gaps = 55/766 (7%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R + A  LFD         + +++ GF  +    EA  L+  + +      C    +SSV
Sbjct: 42  RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS--IFSSV 99

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK  A   +   G+ +HC  I+             L+  S   S +D  M G        
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKF----------GFLDDVSVGTSLVDTYMKG-------- 141

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           S +    KVFD M+ RNVV W T++S Y +     E +  F  M   G +P++ +F    
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
             L+  G       V+ ++VK G +    + V++S I +Y + G    AR +FD    ++
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN+MI GY  N   +EA+ +F   + L+ +   + +F S +   + L+EL   +QLH
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYS-MRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318

Query: 354 AYIIK-NFV-------ALPVIVLNAVIERD-------------VVSWNTMISAFVQNGLD 392
             ++K  F+       AL V         D             VVSW  MIS F+QN   
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           +E + L  EM+++G   +  T + +L+A   +   +V    HA +++        + + L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTAL 434

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +D Y K G ++ A ++F   D  D+D   W+AM+AGY Q G  E A   F ++ +  + P
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID--DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492

Query: 512 NVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N  T +S+L  C     ++  GKQ HGF+I+  LD ++ V ++L+ MY+K G I  A  V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F +  EK+ V++ +MI GY QHG + +AL +F+ MK   ++ D +TF+ V +AC++AGLV
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG + FD+M ++ KI P+ EH  C+ D+  R G++ +A + ++ +        IW ++L
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-TIWRTIL 671

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            +CR+H  +EL  + A+K++ M   +S    +VLLSN+YAE G+W+   KVRK M ER +
Sbjct: 672 AACRVHKKTELGRLAAEKIIAMKPEDSAA--YVLLSNMYAESGDWQERAKVRKLMNERNV 729

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +KE G SWI+V      F + D+ HP   +IY  LE L+  +++ G
Sbjct: 730 KKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 258/579 (44%), Gaps = 91/579 (15%)

Query: 26  QIHSLSPPIPKLKT-PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H++       KT P   S ++   + G    AR LFD     + V WN++I G+  N 
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L  EA+ ++  M+ +  Y      +++SV+K CA  + LR  + +HC  ++      + +
Sbjct: 275 LDLEALGMFYSMRLN--YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             +L+  YS C + LDA    L+  +      ++ C         NVV+W  ++S +++ 
Sbjct: 333 RTALMVAYSKCTAMLDA----LRLFK------EIGCV-------GNVVSWTAMISGFLQN 375

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           +   EAV  F  M R G+RP+  ++  +  AL  +    S   V+  +VK  + Y     
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVK--TNYERSST 429

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV---- 320
           V ++ +  Y +LG  + A K+F    +++   W+ M+ GY Q      AI++F ++    
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           ++ +E  F  +  + A +  S  Q    G+Q H + IK+ +   + V +A++        
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQ----GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                       E+D+VSWN+MIS + Q+G   + L +  EM+K+   +D VT   + +A
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
                       THA L+  G      E Y   M     +  T     E N         
Sbjct: 606 C-----------THAGLVEEG------EKYFDIMVRDCKIAPTK----EHN--------- 635

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI-ASVLPACNPMGNIELGKQLHGFS 539
            + M+  Y++ G LE+A     +++E+   P   TI  ++L AC      ELG+ L    
Sbjct: 636 -SCMVDLYSRAGQLEKAM----KVIENMPNPAGSTIWRTILAACRVHKKTELGR-LAAEK 689

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           I  +  ++      L +MY++SG     A V   + E+N
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/654 (34%), Positives = 349/654 (53%), Gaps = 99/654 (15%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  ++K  S + ++ F+ +  I +Y + GC D ARK+FD  LERN   WN++I  + ++
Sbjct: 41  VHACIIK--SPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKS 98

Query: 308 NHPVEAIELFVQVLELDE------------------------------IVFDDVTFLSAL 337
               +A+ +F ++ ++D+                               + ++ +F SAL
Sbjct: 99  GFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSAL 158

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVV 377
           SA + LQ+L LG Q+H+ + ++     V + +A+++                    R  V
Sbjct: 159 SACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRV 218

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN++I+ + QNG  DE L +  EM K G   D VT+ +++SA + +     G+Q HA +
Sbjct: 219 SWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARV 278

Query: 438 LRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK------------------------ 470
           ++    F     + + L+DMYAK   I  AR IF+                         
Sbjct: 279 VKCD-EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKV 337

Query: 471 -----NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
                ++   +D  TWNA+IAG TQNG  EEA + FR +   +V P   T  ++L AC  
Sbjct: 338 ARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACAN 397

Query: 526 MGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + +++LG+Q H      GF  +Y  D +VFVG SLIDMY K G +     VF  + EK+ 
Sbjct: 398 LADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDC 457

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI+GY Q+G   +AL +F  M   G  PD +T + VL ACS+AGL+DEG   F  
Sbjct: 458 VSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRS 517

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  ++ + P  +HY C+ D+LGR G + EA   ++E+  + + + +WGSLL +C++H + 
Sbjct: 518 MTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAI-VWGSLLAACKVHRNI 576

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L E V KKLLE+D  NS P  +VLLSN+YAE  +W+NV +VRK MR+RG+ K+ GCSWI
Sbjct: 577 QLGEYVVKKLLEVDPENSGP--YVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWI 634

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
           ++ G +N F  KD+ H +  +IY +L  +  +M+ AG      SN      FDE
Sbjct: 635 EIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVPYVGSN-----EFDE 683



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 155/609 (25%), Positives = 272/609 (44%), Gaps = 146/609 (23%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  +S +L  CA +R+ R    VH   I+       F+ N L+++Y  C          
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKC---------- 67

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT--------------------- 204
                      D+  K+FD M  RN+ +WN+I+  + K+                     
Sbjct: 68  --------GCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSW 119

Query: 205 ----------ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
                      R+ EA+  F  M   G   +  SF +   A + L D K    ++ L+ +
Sbjct: 120 NSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYR 179

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
             S Y++D+++ S+ + MY++ G  ++A+ +FD    R+   WN++I  Y QN    EA+
Sbjct: 180 --SNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEAL 237

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--------------- 359
           ++FV++++   +  D+VT  S +SA + +  +  GQQ+HA ++K                
Sbjct: 238 KIFVEMIKCG-VEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLD 296

Query: 360 --------------FVALPV-----------------------IVLNAVIERDVVSWNTM 382
                         F  +P+                        + + ++ +DV++WN +
Sbjct: 297 MYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNAL 356

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+   QNG ++E L+L   ++++       T   LL+A +NL +  +G+Q H+++L+HG 
Sbjct: 357 IAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGF 416

Query: 443 HFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            F+  E       + LIDMY K G ++   ++F+     ++D  +WNAMI GY QNG   
Sbjct: 417 RFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQH--MLEKDCVSWNAMIVGYAQNGFGN 474

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           +A   F +MLE    P+ VT+  VL AC+  G               LLD+  +   S  
Sbjct: 475 KALEVFCKMLESGEAPDHVTMIGVLCACSHAG---------------LLDEGRYYFRS-- 517

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            M ++ G+          +P K+   YT M+   G+ G  E A +L   M    ++PDAI
Sbjct: 518 -MTAQHGL----------MPLKDH--YTCMVDLLGRAGYLEEAKNLIEEMS---MQPDAI 561

Query: 616 TFVAVLSAC 624
            + ++L+AC
Sbjct: 562 VWGSLLAAC 570



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 141/595 (23%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           ++H+     P      I++RL  +  + G   +AR+LFD +       WN+II  F  + 
Sbjct: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99

Query: 85  LPYEAILLYSQMKK--SSPYTS---------------------------CDNYTYSSVLK 115
              +A+ ++ +M +     + S                            + Y++ S L 
Sbjct: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA  ++L++G  +H    R       ++ ++L++MYS C               V+Y++
Sbjct: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC-------------GRVEYAQ 206

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 VFD M  R+ V+WN++++ Y +     EA++ F  M++ G+ P  ++  +V  A
Sbjct: 207 -----SVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSA 261

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-------- 287
            +++   K    ++  +VK   E+ NDL + ++ + MYA+    + AR IFD        
Sbjct: 262 CATISAIKEGQQIHARVVKC-DEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVV 320

Query: 288 -----------------------NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
                                  N + ++   WN +I G  QN    EA+ LF ++L+ +
Sbjct: 321 SETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILF-RLLKRE 379

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------------FVALPVI------ 366
            +     TF + L+A + L +L LG+Q H++++K+            FV   +I      
Sbjct: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKC 439

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V   ++E+D VSWN MI  + QNG  ++ L +  +M + G   D VT+  +L
Sbjct: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVL 499

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            A S           HA LL  G +      Y   M A+ GL+              +D 
Sbjct: 500 CACS-----------HAGLLDEGRY------YFRSMTAQHGLMPL------------KDH 530

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            T   M+    + G LEEA     +M   ++ P+ +   S+L AC    NI+LG+
Sbjct: 531 YT--CMVDLLGRAGYLEEAKNLIEEM---SMQPDAIVWGSLLAACKVHRNIQLGE 580



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 211/453 (46%), Gaps = 37/453 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIHSL      L    + S L  +  + GR   A+ +FD +T  + V WN++I  +  N 
Sbjct: 172 QIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNG 231

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSR 142
              EA+ ++ +M K       D  T +SV+ ACA    ++ G+ +H   ++C  F N   
Sbjct: 232 PVDEALKIFVEMIKCG--VEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRN-DL 288

Query: 143 FVYNSLLNMYSTCLSSLDA----EMVGLKYVEVDYS---------KYDLVCKVFDTMRRR 189
            + N+LL+MY+ C    +A    +M+ ++ V  + S         K  +   +F  M  +
Sbjct: 289 ILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVK 348

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +V+ WN +++   +     EA+  FR++ R  + P+  +F N+  A ++L D +     +
Sbjct: 349 DVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAH 408

Query: 250 GLLVKLGSEYV----NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++K G  +     +D+FV +S I MY + G  +   ++F + LE++   WN MI GY 
Sbjct: 409 SHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYA 468

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           QN    +A+E+F ++LE  E   D VT +  L A S    LD G+     +      +P+
Sbjct: 469 QNGFGNKALEVFCKMLESGEAP-DHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPL 527

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                   +D   +  M+    + G  +E   L+ EM  Q    D++   +LL+A    R
Sbjct: 528 --------KD--HYTCMVDLLGRAGYLEEAKNLIEEMSMQP---DAIVWGSLLAACKVHR 574

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
           N  +G+     LL       G    L +MYA++
Sbjct: 575 NIQLGEYVVKKLLEVDPENSGPYVLLSNMYAEN 607



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 42/192 (21%)

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYS-------------------------------KSG 562
           ++H   I+       F+   LID+Y                                KSG
Sbjct: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A ++F K+P+ +  ++ +MI G+ QHG  + AL  F  M G G   +  +F + LS
Sbjct: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159

Query: 623 ACSYAGLVD--EGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYEFVKELGE 678
           AC  AGL D   G QI  L+   Y+    ++ Y    + DM  + G+V  A     E+  
Sbjct: 160 AC--AGLQDLKLGSQIHSLV---YRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTV 214

Query: 679 EGNVLEIWGSLL 690
              V   W SL+
Sbjct: 215 RSRV--SWNSLI 224


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 233/732 (31%), Positives = 370/732 (50%), Gaps = 104/732 (14%)

Query: 113 VLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMV------- 164
           +L++  ++R+  IG+ +H   I+        F+ N+LLN+Y    SS DA  +       
Sbjct: 18  LLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK 77

Query: 165 ------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                  +          D   +VFD + + + V+W T++  Y     +  AV  F  M+
Sbjct: 78  TTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMV 137

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
             GI P+  +F NV  + ++         V+  +VKLG   V  + VA+S + MYA+ G 
Sbjct: 138 SSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGV--VPVANSLLNMYAKCGD 195

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              A+ +FD    ++T  WNTMI  ++Q          F Q  +L   +FD +T      
Sbjct: 196 SVMAKVVFDRMRLKDTSTWNTMISMHMQ----------FCQ-FDLALALFDQMT------ 238

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL-M 397
                                             + D+VSWN++I+ +   G D   L  
Sbjct: 239 ----------------------------------DPDIVSWNSIITGYCHQGYDIRALET 264

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
             + ++      D  T+ ++LSA +N  +  +GKQ HA+++R  +   G + + LI MYA
Sbjct: 265 FSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYA 324

Query: 457 KSGLIKTARQIFEKNDS------------------GD-------------RDQATWNAMI 485
           KSG ++ A +I E   +                  GD             RD   W AMI
Sbjct: 325 KSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMI 384

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
            GY QNGL+ +A V FR M+     PN  T+A+VL   + + +++ GKQLH  +IR    
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRS 604
            +V VG +LI MYS+SG I  A  +F  I   ++++T+T+MIL   QHG+   A+ LF  
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M    ++PD IT+V VLSAC++ GLV++G   F+LM+  + I+P++ HY C+ D+LGR G
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAG 564

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
            + EAY F++ +  E +V+  WGSLL SCR+H + +LA+V A+KLL +D  NS  G ++ 
Sbjct: 565 LLEEAYNFIRNMPIEPDVVA-WGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNS--GAYLA 621

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           L+N  +  G WE+  KVRK M+++ ++KE G SW+ +   V+ F  +D  HPQ   IY M
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCM 681

Query: 785 LERLAMEMRNAG 796
           + ++  E++  G
Sbjct: 682 ISKIWKEIKKMG 693



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 151/634 (23%), Positives = 271/634 (42%), Gaps = 133/634 (20%)

Query: 15  PTATPPPPQLPQIHSLSPPIPKLKTPTI-RSRLSKICQEGRPHL---------------- 57
           PT  PP      +H L   I K + P I R   ++I + G  +L                
Sbjct: 4   PTPNPPSHSDACVHLLQSAI-KSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTG 62

Query: 58  ----ARQLFDSITRPTTVIWNTI-------------------------------IIGFVC 82
               A +LFD +   TT  WNTI                               I+G+  
Sbjct: 63  SSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGY-- 120

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N+L      +++ ++  S   S   +T+++VL +CA  + L +GK VH   ++   +   
Sbjct: 121 NHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVV 180

Query: 143 FVYNSLLNMYSTCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRR 189
            V NSLLNMY+ C  S+ A++V              +  + + + ++DL   +FD M   
Sbjct: 181 PVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDP 240

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVV 248
           ++V+WN+I++ Y      + A+  F  ML+   ++P   +  +V  A ++    K    +
Sbjct: 241 DIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQI 300

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYA---------------------------------E 275
           +  +V+   +      V ++ I MYA                                 +
Sbjct: 301 HAHIVRADVDIAGA--VGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFK 358

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
           +G  D AR IFD+   R+   W  MI GY QN    +A+ LF +++  +    ++ T  +
Sbjct: 359 IGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLF-RLMIREGPKPNNYTLAA 417

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------R 374
            LS +S L  LD G+QLHA  I+      V V NA+I                      R
Sbjct: 418 VLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYR 477

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D ++W +MI +  Q+GL +E + L  +M +     D +T   +LSA +++   + GK ++
Sbjct: 478 DTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGK-SY 536

Query: 435 AYLLRHGIHFEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
             L+++  + E   S+   +ID+  ++GL++ A   F +N   + D   W ++++    +
Sbjct: 537 FNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYN-FIRNMPIEPDVVAWGSLLSSCRVH 595

Query: 492 GLLEEAFVAFRQML--EHNVTPNVVTIASVLPAC 523
             ++ A VA  ++L  + N +   + +A+ L AC
Sbjct: 596 KYVDLAKVAAEKLLLIDPNNSGAYLALANTLSAC 629


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 261/807 (32%), Positives = 419/807 (51%), Gaps = 81/807 (10%)

Query: 27  IHSLSPPIPKLKT-PTIRSRLSKICQEGRPHLARQ---LFDSITRPTTVIWNTIIIGFVC 82
           +HSL PP   L    T   R  K C +    L +    LF+ I +P     N  ++ F+ 
Sbjct: 2   LHSLPPPSKFLNVHKTTLQRSFKTCLKLFHSLKKHEHNLFEKIPQPNASSINRSMLNFLH 61

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
            NLP++A+ ++    +     + D  T +   KAC       +G  +H  F+      SR
Sbjct: 62  KNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKAC--RGEFILGAQIH-GFVVATGFVSR 118

Query: 143 F-VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             V NSL+ MY                      +++L   VF+ +   ++V+WNTI+S +
Sbjct: 119 VTVSNSLMKMYCKA------------------GRFELALCVFEGLSCPDIVSWNTILSGF 160

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL-----LVKLG 256
              E+ V+A+     M   G+    +++            +     ++GL     +VK G
Sbjct: 161 ---EKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCG 217

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN--HPVEAI 314
             +  ++F+ ++ + MY+  G  D A ++F+    R+   WN M+ GY Q    + +EA+
Sbjct: 218 --FGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAV 275

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
            LF  ++  + ++ D V+   A+SA    + L+ G+Q+H    K      V V N +I  
Sbjct: 276 LLFGNMVR-EGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLIST 334

Query: 374 -------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFMIDSVT 413
                              R+VVSW T+IS      +D+E ++ ++  M+  G   + VT
Sbjct: 335 YSKCKVLRDAKAVFQDMSARNVVSWTTLIS------IDEENVVSLFNAMRVDGVYPNDVT 388

Query: 414 VTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
              LL A + +RN    G   H   L+  +  E  + + LI MYAK   I+ +++IFE+ 
Sbjct: 389 FIGLLHAIT-IRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEEL 447

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
           +   +   +WNA+I+GY QNGL +EAF+ F   ++  + PN  T  SVL A     +I L
Sbjct: 448 NY--QGTISWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNAIAAAEDISL 504

Query: 532 --GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G++ H   I+  L+ + FV  +L+DMY K G IN +  VF + PEK   ++T MI  Y
Sbjct: 505 KHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAY 564

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            +HG  E  +SL++ ++  G   D+ITF++VL+AC   G+VD G  IFD M +++ I+P+
Sbjct: 565 ARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPT 624

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY  + DMLGRVG++ EA E + ++   G  L +  SLLGSC+LHG+ E+AE V   L
Sbjct: 625 PEHYSIMVDMLGRVGRLDEAEELMHQI-PGGPGLSVLQSLLGSCKLHGNVEMAERVVDSL 683

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG----YV 765
           ++MD  +S P  +VL++N+YAE+GNWE V +VRK MR RG++KEVG SW+DV      ++
Sbjct: 684 IQMDPGSSGP--YVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHL 741

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEM 792
           + F+S D+ HP+S  I  M E L ++M
Sbjct: 742 HGFSSGDKSHPESETIDRMAEFLGLQM 768


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 233/771 (30%), Positives = 397/771 (51%), Gaps = 73/771 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    AR +FD+++    V+WN ++ G+V      EA+LL  +M + +     ++ T
Sbjct: 106 CKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRP--NSRT 163

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             ++L AC     LR+G+ VH + +R          N + +      ++L    +G  Y+
Sbjct: 164 MVALLLACEGASELRLGRGVHGYCLR----------NGMFDSNPHVATAL----IGF-YL 208

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
             D     L+   FD M  RN+V+WN ++S Y     Y +A+  F  ML   ++   ++ 
Sbjct: 209 RFDMRVLPLL---FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 265

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +    A + LG  K    ++ L +K   E+V DL++ ++ + MY+  G  + + ++F++ 
Sbjct: 266 LVAVQACAELGSLKLGKQIHQLAIKF--EFVEDLYILNALLNMYSNNGSLESSHQLFESV 323

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDL 348
             R+  +WN+MI  Y       EA++LF++ ++ + +  D+ T +  LS   +L   L  
Sbjct: 324 PNRDAPLWNSMISAYAAFGCHEEAMDLFIR-MQSEGVKKDERTVVIMLSMCEELASGLLK 382

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQ 388
           G+ LHA++IK+ + +   + NA++                      D++SWNTMI A  +
Sbjct: 383 GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALAR 442

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGM 447
           N L  +   L   M++     +S T+ ++L+A  ++   D G+  H Y+++H I   + +
Sbjct: 443 NTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPL 502

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L DMY   G   TAR +FE     DRD  +WNAMI                      
Sbjct: 503 RTALADMYMNCGDEATARDLFEG--CPDRDLISWNAMIX--------------------- 539

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVIN 565
              PN VTI +VL +   +  +  G+ LH +  R  + L  ++ +  + I MY++ G + 
Sbjct: 540 KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQ 599

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A N+F  +P++N +++  MI GYG +G    A+  F  M   G  P+ +TFV+VLSACS
Sbjct: 600 SAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACS 659

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++G ++ GLQ+F  M Q++ + P   HY C+ D+L R G + EA EF+  +  E +   +
Sbjct: 660 HSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDA-SV 718

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL SCR +  ++ A+ + +KL +++  N+  G +VLLSN+YA  G W  V ++R  +
Sbjct: 719 WRALLSSCRAYSDAKQAKTIFEKLDKLEPMNA--GNYVLLSNVYATAGLWLEVRRIRTWL 776

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +E+GLRK  G SWI V   V+ F++ D+ HPQS KIY  L  L   MR  G
Sbjct: 777 KEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETG 827



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 176/664 (26%), Positives = 304/664 (45%), Gaps = 75/664 (11%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN++I      NL  +  +L +  +  S     +N T   VLKACA    +  GK++H  
Sbjct: 28  WNSVIKHQA--NLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRS 85

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                      V  ++++ Y  C            +VE      D  C VFD M  R+VV
Sbjct: 86  IQGTDLMDDVRVGTAVVDFYCKC-----------GFVE------DARC-VFDAMSDRDVV 127

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
            WN +V  YV    Y EA+   R M R  +RP++ + V +  A     + +    V+G  
Sbjct: 128 LWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYC 187

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFA--RKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           ++ G  + ++  VA++ I  Y     FD      +FD  + RN   WN MI GY      
Sbjct: 188 LRNGM-FDSNPHVATALIGFYLR---FDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDY 243

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            +A+ELFVQ+L +DE+ FD VT L A+ A ++L  L LG+Q+H   IK      + +LNA
Sbjct: 244 FKALELFVQML-VDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA 302

Query: 371 VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++                     RD   WN+MISA+   G  +E + L   MQ +G   D
Sbjct: 303 LLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKD 362

Query: 411 SVTVTALLSAASNLRNQDV-GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF 468
             TV  +LS    L +  + GK  HA++++ G+  +  + + L+ MY +   +++ ++IF
Sbjct: 363 ERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIF 422

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++      D  +WN MI    +N L  +A   F +M E  + PN  TI S+L AC  +  
Sbjct: 423 DRMKG--VDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTC 480

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++ G+ +HG+ +++ ++ N  + T+L DMY   G    A ++F   P+++ +++  MI  
Sbjct: 481 LDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIX- 539

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQ 647
                                 EP+++T + VLS+ ++   + +G  +   + ++ + + 
Sbjct: 540 --------------------KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLG 579

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
                      M  R G +  A    K L +  N++  W +++    ++G    A +   
Sbjct: 580 LDLSLANAFITMYARCGSLQSAENIFKTLPKR-NIIS-WNAMIAGYGMNGRGSDAMLAFS 637

Query: 708 KLLE 711
           ++LE
Sbjct: 638 QMLE 641



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 124/524 (23%), Positives = 225/524 (42%), Gaps = 77/524 (14%)

Query: 26  QIHSLSPPIPKLKTPTI-RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH L+     ++   I  + L+     G    + QLF+S+      +WN++I  +    
Sbjct: 283 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 342

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE-TRNLRIGKAVHCHFIRCFSNPSRF 143
              EA+ L+ +M+  S     D  T   +L  C E    L  GK++H H I+        
Sbjct: 343 CHEEAMDLFIRMQ--SEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 400

Query: 144 VYNSLLNMYS--TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           + N+LL+MY+   C+ S                    V K+FD M+  ++++WNT++   
Sbjct: 401 LGNALLSMYTELNCVES--------------------VQKIFDRMKGVDIISWNTMILAL 440

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            +     +A   F  M    I+P++ + +++  A   +        ++G ++K   E   
Sbjct: 441 ARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQ 500

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
            L  A +   MY   G    AR +F+ C +R+   WN MI     N+             
Sbjct: 501 PLRTALAD--MYMNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNS------------- 545

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--FVALPVIVLNAVI------- 372
                    VT ++ LS+ + L  L  GQ LHAY+ +    + L + + NA I       
Sbjct: 546 ---------VTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCG 596

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        +R+++SWN MI+ +  NG   + ++   +M + GF  + VT  ++LS
Sbjct: 597 SLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLS 656

Query: 420 AASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A S+    ++G Q  H+ +    +  E +  S ++D+ A+ G I  AR+ F  +   + D
Sbjct: 657 ACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE-FIDSMPIEPD 715

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASV 519
            + W A+++        ++A   F ++  LE     N V +++V
Sbjct: 716 ASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNV 759



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%)

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D   WN++I         +    A+ QM    V PN  T+  VL AC     +E GK +
Sbjct: 23  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 82

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H       L  +V VGT+++D Y K G +  A  VF  + +++ V +  M+ GY   G  
Sbjct: 83  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 142

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
           E A+ L R M    + P++ T VA+L AC  A
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGA 174


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 236/765 (30%), Positives = 388/765 (50%), Gaps = 51/765 (6%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G+   AR LF  ++ P  V WN +I G         AI  +  M+KSS  ++    T  S
Sbjct: 275  GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST--RSTLGS 332

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL A     NL +G  VH   I+     + +V +SL++MYS C                 
Sbjct: 333  VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC----------------- 375

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              K +   KVF+ +  +N V WN ++  Y       + +  F  M   G      +F ++
Sbjct: 376  -EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                ++  D +     + +++K   +   +LFV ++ + MYA+ G  + AR+IF+   +R
Sbjct: 435  LSTCAASHDLEMGSQFHSIIIK--KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            +   WNT+IG YVQ+ +  EA +LF + + L  IV D     S L A + +  L  G+Q+
Sbjct: 493  DNVTWNTIIGSYVQDENESEAFDLF-KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551

Query: 353  HAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
            H   +K                      +     V +++ E  VVS N +I+ + QN L+
Sbjct: 552  HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE 611

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESY 450
             E ++L  EM  +G     +T   ++ A     +  +G Q H  + + G   EG  +   
Sbjct: 612  -EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            L+ MY  S  +  A  +F +  S  +    W  M++G++QNG  EEA   +++M    V 
Sbjct: 671  LLGMYMNSRGMTEACALFSELSS-PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            P+  T  +VL  C+ + ++  G+ +H        D +     +LIDMY+K G +  ++ V
Sbjct: 730  PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789

Query: 571  FAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  + N V++ ++I GY ++G +E AL +F SM+   I PD ITF+ VL+ACS+AG 
Sbjct: 790  FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849

Query: 630  VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            V +G +IF++M  +Y I+   +H  C+ D+LGR G + EA +F++    + +   +W SL
Sbjct: 850  VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDA-RLWSSL 908

Query: 690  LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
            LG+CR+HG     E+ A+KL+E++ +NS    +VLLSNIYA +G WE  + +RK MR+RG
Sbjct: 909  LGACRIHGDDIRGEISAEKLIELEPQNSSA--YVLLSNIYASQGCWEKANALRKVMRDRG 966

Query: 750  LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
            ++K  G SWIDV    + FA+ D+ H +  KI   LE L   M++
Sbjct: 967  VKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 171/590 (28%), Positives = 270/590 (45%), Gaps = 87/590 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A + FD + +  T  WN+++  +     P + +  +  + ++  +   + +T+S VL  C
Sbjct: 114 AEKQFDFLEKDVTA-WNSMLSMYSSIGKPGKVLRSFVSLFENQIFP--NKFTFSIVLSTC 170

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   N+  G+ +HC  I+     + +   +L++MY+ C    DA                
Sbjct: 171 ARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR--------------- 215

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF+ +   N V W  + S YVK     EAV  F  M   G RP  ++FV V     
Sbjct: 216 ---RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG  K A +++G                        E+   D                W
Sbjct: 273 RLGKLKDARLLFG------------------------EMSSPDVV-------------AW 295

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+ +      AIE F   +    +     T  S LSA+  +  LDLG  +HA  I
Sbjct: 296 NVMISGHGKRGCETVAIEYFFN-MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354

Query: 358 KNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K  +A  +                     V  A+ E++ V WN MI  +  NG   + + 
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
           L  +M+  G+ ID  T T+LLS  +   + ++G Q H+ +++  +    F G  + L+DM
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG--NALVDM 472

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G ++ ARQIFE+    DRD  TWN +I  Y Q+    EAF  F++M    +  +  
Sbjct: 473 YAKCGALEDARQIFER--MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            +AS L AC  +  +  GKQ+H  S++  LD+++  G+SLIDMYSK G+I  A  VF+ +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           PE + V+   +I GY Q+ + E A+ LF+ M   G+ P  ITF  ++ AC
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 248/515 (48%), Gaps = 40/515 (7%)

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           LRIGKAVH   +    +    + N+++++Y+ C              +V Y++     K 
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKC-------------AQVSYAE-----KQ 117

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD + + +V AWN+++S Y    +  + +R F  +    I P+  +F  V    +   + 
Sbjct: 118 FDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +    ++  ++K+G E   + +   + + MYA+      AR++F+  ++ NT  W  +  
Sbjct: 177 EFGRQIHCSMIKMGLE--RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GYV+   P EA+ +F ++ +      D + F++ ++       + LG+   A ++   ++
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRP-DHLAFVTVINTY-----IRLGKLKDARLLFGEMS 288

Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
            P          DVV+WN MIS   + G +   +   + M+K        T+ ++LSA  
Sbjct: 289 SP----------DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            + N D+G   HA  ++ G+     + S L+ MY+K   ++ A ++FE  +  +++   W
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE--EKNDVFW 396

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAMI GY  NG   +    F  M       +  T  S+L  C    ++E+G Q H   I+
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             L +N+FVG +L+DMY+K G +  A  +F ++ ++++VT+ T+I  Y Q      A  L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           F+ M  CGI  D     + L AC++   + +G Q+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 205/448 (45%), Gaps = 61/448 (13%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           + ++ + +YA+     +A K FD  LE++   WN+M+  Y     P + +  FV + E +
Sbjct: 97  LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-N 154

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALP 364
           +I  +  TF   LS  ++   ++ G+Q+H  +IK                    + ++  
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             V   +++ + V W  + S +V+ GL +E +++   M+ +G   D +    +       
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------- 267

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
                                      I+ Y + G +K AR +F +  S   D   WN M
Sbjct: 268 ---------------------------INTYIRLGKLKDARLLFGEMSS--PDVVAWNVM 298

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           I+G+ + G    A   F  M + +V     T+ SVL A   + N++LG  +H  +I+  L
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
             N++VG+SL+ MYSK   +  AA VF  + EKN V +  MI GY  +G S + + LF  
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           MK  G   D  TF ++LS C+ +  ++ G Q   ++ ++ K+  +      + DM  + G
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCG 477

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGS 692
            + +A +  + + +  NV   W +++GS
Sbjct: 478 ALEDARQIFERMCDRDNV--TWNTIIGS 503


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 212/638 (33%), Positives = 349/638 (54%), Gaps = 32/638 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF+ +  +  V ++ ++  Y K     +A+  F  M+   +R     +  +        
Sbjct: 100 RVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENL 159

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D K    ++GL++  G E  ++LFV ++ + +YA+    D A K+F+    ++   W T+
Sbjct: 160 DLKKGREIHGLIITNGFE--SNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTL 217

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY QN H   A++L +Q+ E  +   D VT +S L AV+ ++ L +G+ +H Y  ++ 
Sbjct: 218 VAGYAQNGHAKRALQLVLQMQEAGQKP-DSVTLVSILPAVADMKALRIGRSIHGYAFRSG 276

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V NA+++                    + VVSWNTMI    QNG  +E      
Sbjct: 277 FESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFL 336

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL--LRHGIHFEGMESYLIDMYAKS 458
           +M  +G +   VT+  +L A +NL + + G   H  L  L+   +   M S LI MY+K 
Sbjct: 337 KMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNS-LISMYSKC 395

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             +  A  IF   ++ ++   TWNAMI GY QNG ++EA   F  M    +  +  T+  
Sbjct: 396 KRVDIAASIF---NNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVG 452

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           V+ A          K +HG ++R  +D NVFV T+L+DMY+K G I  A  +F  + E++
Sbjct: 453 VITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERH 512

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            +T+  MI GYG HG+ +  L LF  M+   ++P+ ITF++V+SACS++G V+EGL +F 
Sbjct: 513 VITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFK 572

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            MQ++Y ++P+ +HY  + D+LGR G++ +A+ F++E+  +  +  + G++LG+C++H +
Sbjct: 573 SMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGI-SVLGAMLGACKIHKN 631

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            EL E  A+KL ++D      GYHVLL+NIYA    W+ V KVR  M ++GL K  GCSW
Sbjct: 632 VELGEKAAQKLFKLDPDEG--GYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSW 689

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +++   ++ F S    HP+S KIY  LE L  E++ AG
Sbjct: 690 VELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAG 727



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 270/569 (47%), Gaps = 56/569 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S  C+ G    A ++F+ +     V+++ ++ G+  N+   +A+  + +M        C
Sbjct: 86  ISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMM-------C 138

Query: 106 DNY-----TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           D        Y+ +L+ C E  +L+ G+ +H   I      + FV  +++++Y+ C     
Sbjct: 139 DEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC----- 193

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                         + D   K+F+ M+ +++V+W T+V+ Y +      A++    M   
Sbjct: 194 -------------RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G +P +++ V++ PA++ +   +    ++G   + G E + +  V ++ + MY + G   
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN--VTNALLDMYFKCGSAR 298

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            AR +F     +    WNTMI G  QN    EA   F+++L+  E+    VT +  L A 
Sbjct: 299 IARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVP-TRVTMMGVLLAC 357

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------------ERDVVSWNT 381
           + L +L+ G  +H  + K  +   V V+N++I                   E+  V+WN 
Sbjct: 358 ANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNA 417

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI  + QNG   E L L   MQ QG  +D  T+  +++A ++       K  H   +R  
Sbjct: 418 MILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRAC 477

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +     + + L+DMYAK G IKTAR++F+     +R   TWNAMI GY  +G+ +E    
Sbjct: 478 MDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ--ERHVITWNAMIDGYGTHGVGKETLDL 535

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYS 559
           F +M +  V PN +T  SV+ AC+  G +E G  L       Y L+  +   ++++D+  
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++G ++ A N   ++P K  ++    +LG
Sbjct: 596 RAGQLDDAWNFIQEMPIKPGISVLGAMLG 624



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/388 (31%), Positives = 204/388 (52%), Gaps = 29/388 (7%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           + N+    +  I ++ + G    A ++F++   +   +++ M+ GY +N+   +A+  F+
Sbjct: 75  FYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFL 134

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------ 372
           +++  DE+      +   L    +  +L  G+++H  II N     + V+ AV+      
Sbjct: 135 RMM-CDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC 193

Query: 373 --------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          +D+VSW T+++ + QNG     L LV +MQ+ G   DSVT+ ++L
Sbjct: 194 RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSIL 253

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGM---ESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            A ++++   +G+  H Y  R G  FE +    + L+DMY K G  + AR +F+   S  
Sbjct: 254 PAVADMKALRIGRSIHGYAFRSG--FESLVNVTNALLDMYFKCGSARIARLVFKGMRS-- 309

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +   +WN MI G  QNG  EEAF  F +ML+    P  VT+  VL AC  +G++E G  +
Sbjct: 310 KTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFV 369

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H    +  LD NV V  SLI MYSK   ++ AA++F  + EK +VT+  MILGY Q+G  
Sbjct: 370 HKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCV 428

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + AL+LF  M+  GI+ D  T V V++A
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITA 456


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 235/735 (31%), Positives = 378/735 (51%), Gaps = 64/735 (8%)

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
           +P+TS    T    L   ++ RNL  G+AVH   IR  ++      N L+N Y+ C    
Sbjct: 11  NPHTS----TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC---- 62

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRM 216
                          K      +F+ +  ++VV+WN++++ Y +          ++ FR 
Sbjct: 63  --------------GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE 108

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M    I P+  +   +F A SSL         + L+VK+ S    D++V +S + MY + 
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS--FGDIYVDTSLVGMYCKA 166

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVTFLS 335
           G  +   K+F    ERNT  W+TM+ GY       EAI++F   L E +E    D  F +
Sbjct: 167 GLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTA 226

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            LS+++    + LG+Q+H   IKN +   V + NA++                    +R+
Sbjct: 227 VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN 286

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            ++W+ M++ + QNG   E + L   M   G      T+  +L+A S++   + GKQ H+
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346

Query: 436 YLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           +LL+ G  FE      + L+DMYAK+G +  AR+ F+     +RD A W ++I+GY QN 
Sbjct: 347 FLLKLG--FERHLFATTALVDMYAKAGCLADARKGFDCLQ--ERDVALWTSLISGYVQNS 402

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEA + +R+M    + PN  T+ASVL AC+ +  +ELGKQ+HG +I++     V +G+
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L  MYSK G +     VF + P K+ V++  MI G   +G  + AL LF  M   G+EP
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D +TFV ++SACS+ G V+ G   F++M  +  + P  +HY C+ D+L R G++ EA EF
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582

Query: 673 VKELGEEGNV---LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
           +    E  N+   L +W  LL +C+ HG  EL     +KL+ + +R S    +V LS IY
Sbjct: 583 I----ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST--YVQLSGIY 636

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
              G   +V++V K MR  G+ KEVGCSWI++    + F   D  HP   +  +++  ++
Sbjct: 637 TALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVS 696

Query: 790 MEMRNAGNKTIQNSN 804
            +M   G  T+ +S+
Sbjct: 697 RQMIEEGFVTVLDSS 711



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 243/540 (45%), Gaps = 67/540 (12%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q H+L   +       + + L  + C+ G      ++F  +    T  W+T++ G+    
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EAI +++   +     S  +Y +++VL + A T  + +G+ +HC  I+        +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MYS C S  +A                  CK+FD+   RN + W+ +V+ Y + 
Sbjct: 259 SNALVTMYSKCESLNEA------------------CKMFDSSGDRNSITWSAMVTGYSQN 300

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
              +EAV+ F  M   GI+PS  + V V  A S +   +    ++  L+KLG E    LF
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE--RHLF 358

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
             ++ + MYA+ GC   ARK FD   ER+  +W ++I GYVQN+   EA+ L+ + ++  
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY-RRMKTA 417

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------------------- 365
            I+ +D T  S L A S L  L+LG+Q+H + IK+   L V                   
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477

Query: 366 -IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
            +V      +DVVSWN MIS    NG  DE L L  EM  +G   D VT   ++SA S+ 
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH- 536

Query: 425 RNQDVGKQTHAYLLRHGIHFEGME------------SYLIDMYAKSGLIKTARQIFEKND 472
                      ++ R   +F  M             + ++D+ +++G +K A++  E  +
Sbjct: 537 ---------KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIE 530
             D     W  +++    +G  E    A  ++  L    +   V ++ +  A   M ++E
Sbjct: 588 I-DHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVE 646


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 220/654 (33%), Positives = 354/654 (54%), Gaps = 36/654 (5%)

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            + + K     ++FD M  R  V+W  ++  Y+++ +  EA R +  M R GI P  ++ 
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 230 VNVFPALSSLGDYKSADVVYGL---LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           V +   LS  G+ ++ +V+  +   ++KLG EY  +L V +S +  Y +  C   A ++F
Sbjct: 144 VTL---LSGFGELETKNVIVQIHTHVIKLGYEY--NLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            + L ++T  +N+++ GY       EAIELF++ L    I   D TF + LSA   L + 
Sbjct: 199 KHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE-LHNSGIKPSDFTFAALLSAAVGLDDT 257

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             GQQ+H +++K      V V NA++                    E D +S+N +I+++
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSY 317

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
             NG   E   L  ++Q   F         LLS A++  N  +G+Q H   +  G +FE 
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +E+ L+DMYAK    K A++IF+  +   +    W AMI+ Y Q G  EE    F  M 
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFD--NIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              V  +  T AS+L AC  + +I LG+QLH   IR     NV+ G++L+D Y+K G + 
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F ++PE+NSV++  +I  Y Q+G  +  L+ F+ M   G +PD+++F++VLSACS
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           + G V+E L  F+ M Q Y++ P  EHY  + D+L R G+  EA + + E+  E + + +
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI-M 614

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEM-DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           W S+L SCR+H + ELA+  A +L  M D R++ P  ++ +SNIYA  G W+NV KV+K 
Sbjct: 615 WSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP--YINMSNIYAVAGQWDNVAKVKKA 672

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           MR+RG+RK    SW+++    + F++ D+ HP+  KI   +  L+ EM   G K
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYK 726



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 296/650 (45%), Gaps = 66/650 (10%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L   H +   +P   T ++   +S   + G+   AR+LFD +   T V W  +I G++ +
Sbjct: 59  LVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           N   EA  LY+ M++       D  T  ++L    E     +   +H H I+     +  
Sbjct: 119 NQSKEAFRLYADMRRGG--IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 144 VYNSLLNMY--STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           V NSL++ Y  + CL                     L  ++F  M  ++ V +N++++ Y
Sbjct: 177 VCNSLVDAYCKTHCLY--------------------LASQLFKHMLNKDTVTFNSLMTGY 216

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
                  EA+  F  +   GI+PS  +F  +  A   L D K    V+G ++K  + +V 
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK--TNFVW 274

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF--VQ 319
           ++FV ++ +  Y++    D   K+F    E +   +N +I  Y  N    E+ +LF  +Q
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQ 334

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
               D   F   T LS   A S L  L +G+Q+H   I         V NA+++      
Sbjct: 335 FTRFDRRQFPFATLLSI--ATSSLN-LRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         +  V W  MISA+VQ G  +EG+ +  +M++ G   D  T  ++L 
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 420 AASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           A +NL +  +G+Q H+ L+R G     + G  S L+D YAK G +  A + F   +  +R
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSG--SALLDTYAKCGCMTDAIKSF--GEMPER 507

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK-QL 535
           +  +WNA+I+ Y QNG ++    +F+QM++    P+ V+  SVL AC+  G +E      
Sbjct: 508 NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF 567

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---YGQ 591
           +  +  Y +       TS++D+  ++G  + A  +  ++P E + + +++++     +  
Sbjct: 568 NSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKN 627

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           H ++++A     +M+      DA  ++ + +  + AG  D   ++   M+
Sbjct: 628 HELAKKAADRLFNMEDL---RDAAPYINMSNIYAVAGQWDNVAKVKKAMR 674



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 529 IELGKQLHGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
           +E G  +H   +    DQ    N      +I  + K G ++ A  +F  + E+ +V++T 
Sbjct: 54  LERGDLVHAHQV---FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +I GY Q   S+ A  L+  M+  GIEPD +T V +LS 
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 220/654 (33%), Positives = 354/654 (54%), Gaps = 36/654 (5%)

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            + + K     ++FD M  R  V+W  ++  Y+++ +  EA R +  M R GI P  ++ 
Sbjct: 84  HLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL 143

Query: 230 VNVFPALSSLGDYKSADVVYGL---LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           V +   LS  G+ ++ +V+  +   ++KLG EY  +L V +S +  Y +  C   A ++F
Sbjct: 144 VTL---LSGFGELETKNVIVQIHTHVIKLGYEY--NLMVCNSLVDAYCKTHCLYLASQLF 198

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            + L ++T  +N+++ GY       EAIELF++ L    I   D TF + LSA   L + 
Sbjct: 199 KHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLE-LHNSGIKPSDFTFAALLSAAVGLDDT 257

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             GQQ+H +++K      V V NA++                    E D +S+N +I+++
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSY 317

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
             NG   E   L  ++Q   F         LLS A++  N  +G+Q H   +  G +FE 
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +E+ L+DMYAK    K A++IF+  +   +    W AMI+ Y Q G  EE    F  M 
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFD--NIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              V  +  T AS+L AC  + +I LG+QLH   IR     NV+ G++L+D Y+K G + 
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F ++PE+NSV++  +I  Y Q+G  +  L+ F+ M   G +PD+++F++VLSACS
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           + G V+E L  F+ M Q Y++ P  EHY  + D+L R G+  EA + + E+  E + + +
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEI-M 614

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEM-DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           W S+L SCR+H + ELA+  A +L  M D R++ P  ++ +SNIYA  G W+NV KV+K 
Sbjct: 615 WSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAP--YINMSNIYAVAGQWDNVAKVKKA 672

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           MR+RG+RK    SW+++    + F++ D+ HP+  KI   +  L+ EM   G K
Sbjct: 673 MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYK 726



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 296/650 (45%), Gaps = 66/650 (10%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L   H +   +P   T ++   +S   + G+   AR+LFD +   T V W  +I G++ +
Sbjct: 59  LVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQS 118

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           N   EA  LY+ M++       D  T  ++L    E     +   +H H I+     +  
Sbjct: 119 NQSKEAFRLYADMRRGG--IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLM 176

Query: 144 VYNSLLNMY--STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           V NSL++ Y  + CL                     L  ++F  M  ++ V +N++++ Y
Sbjct: 177 VCNSLVDAYCKTHCLY--------------------LASQLFKHMLNKDTVTFNSLMTGY 216

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
                  EA+  F  +   GI+PS  +F  +  A   L D K    V+G ++K  + +V 
Sbjct: 217 SNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLK--TNFVW 274

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF--VQ 319
           ++FV ++ +  Y++    D   K+F    E +   +N +I  Y  N    E+ +LF  +Q
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQ 334

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
               D   F   T LS   A S L  L +G+Q+H   I         V NA+++      
Sbjct: 335 FTRFDRRQFPFATLLSI--ATSSLN-LRMGRQIHCQAITVGANFESRVENALVDMYAKCN 391

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         +  V W  MISA+VQ G  +EG+ +  +M++ G   D  T  ++L 
Sbjct: 392 GDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILR 451

Query: 420 AASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           A +NL +  +G+Q H+ L+R G     + G  S L+D YAK G +  A + F   +  +R
Sbjct: 452 ACANLASISLGRQLHSLLIRSGFMSNVYSG--SALLDTYAKCGCMTDAIKSF--GEMPER 507

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK-QL 535
           +  +WNA+I+ Y QNG ++    +F+QM++    P+ V+  SVL AC+  G +E      
Sbjct: 508 NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHF 567

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---YGQ 591
           +  +  Y +       TS++D+  ++G  + A  +  ++P E + + +++++     +  
Sbjct: 568 NSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKN 627

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           H ++++A     +M+      DA  ++ + +  + AG  D   ++   M+
Sbjct: 628 HELAKKAADRLFNMEDL---RDAAPYINMSNIYAVAGQWDNVAKVKKAMR 674



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 529 IELGKQLHGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
           +E G  +H   +    DQ    N      +I  + K G ++ A  +F  + E+ +V++T 
Sbjct: 54  LERGDLVHAHQV---FDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTI 110

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +I GY Q   S+ A  L+  M+  GIEPD +T V +LS 
Sbjct: 111 LIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 218/645 (33%), Positives = 353/645 (54%), Gaps = 29/645 (4%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y   D   +VF+ +  +  V ++T++  + K     +A++ F  M    + P   +F  +
Sbjct: 82  YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                   + +    ++GLLVK G  +  DLF  +    MYA+    + ARK+FD   ER
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSG--FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT++ GY QN     A+E+   + E + +    +T +S L AVS L+ + +G+++
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEI 258

Query: 353 HAYIIKN-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H Y +++ F +L  I                   + + ++ER+VVSWN+MI A+VQN   
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E +++  +M  +G     V+V   L A ++L + + G+  H   +  G+     + + L
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 378

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MY K   + TA  +F K  S  R   +WNAMI G+ QNG   +A   F QM    V P
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQS--RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T  SV+ A   +      K +HG  +R  LD+NVFV T+L+DMY+K G I  A  +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             + E++  T+  MI GYG HG  + AL LF  M+   I+P+ +TF++V+SACS++GLV+
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            GL+ F +M++ Y I+ S +HY  + D+LGR G++ EA++F+ ++  +  V  ++G++LG
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV-NVYGAMLG 615

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C++H +   AE  A++L E++  +   GYHVLL+NIY     WE V +VR  M  +GLR
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDG--GYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  GCS +++   V+ F S    HP S KIY  LE+L   ++ AG
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 284/573 (49%), Gaps = 57/573 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S  C+ G    A ++F+ I     V+++T++ GF   +   +A+  + +M+        
Sbjct: 76  VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            N+TY  +LK C +   LR+GK +H   ++   +   F    L NMY+ C    +A    
Sbjct: 136 YNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR--- 190

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          KVFD M  R++V+WNTIV+ Y +      A+   + M    ++PS
Sbjct: 191 ---------------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+ V+V PA+S+L        ++G  ++ G + + +  ++++ + MYA+ G  + AR++
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQL 293

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD  LERN   WN+MI  YVQN +P EA+ +F ++L+ + +   DV+ + AL A + L +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGD 352

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           L+ G+ +H   ++  +   V V+N++I                     R +VSWN MI  
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F QNG   + L    +M+ +    D+ T  ++++A + L      K  H  ++R  +   
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L+DMYAK G I  AR IF+     +R   TWNAMI GY  +G  + A   F +M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS------LIDMY 558
            +  + PN VT  SV+ AC+  G +E G  L  F   Y++ +N  +  S      ++D+ 
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAG--LKCF---YMMKENYSIELSMDHYGAMVDLL 585

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            ++G +N A +   ++P K +V     +LG  Q
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 240/461 (52%), Gaps = 29/461 (6%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F  +  + ++   G  D A ++F+    +   +++TM+ G+ + +   +A++ FV++   
Sbjct: 70  FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129

Query: 324 D-EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI---------------- 366
           D E V  + T+L  L       EL +G+++H  ++K+  +L +                 
Sbjct: 130 DVEPVVYNFTYL--LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               V + + ERD+VSWNT+++ + QNG+    L +V  M ++      +T+ ++L A S
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247

Query: 423 NLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            LR   VGK+ H Y +R G      + + L+DMYAK G ++TARQ+F+     +R+  +W
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSW 305

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N+MI  Y QN   +EA + F++ML+  V P  V++   L AC  +G++E G+ +H  S+ 
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             LD+NV V  SLI MY K   ++ AA++F K+  +  V++  MILG+ Q+G    AL+ 
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  M+   ++PD  T+V+V++A +   +      I  ++ +   +  +      + DM  
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDKNVFVTTALVDMYA 484

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           + G ++ A   + ++  E +V   W +++     HG  + A
Sbjct: 485 KCGAIMIA-RLIFDMMSERHV-TTWNAMIDGYGTHGFGKAA 523



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 21/215 (9%)

Query: 27  IHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           IH LS  +        + S +S  C+      A  +F  +   T V WN +I+GF  N  
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
           P +A+  +SQM+  S     D +TY SV+ A AE       K +H   +R   + + FV 
Sbjct: 419 PIDALNYFSQMR--SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            +L++MY+ C + + A +                  +FD M  R+V  WN ++  Y    
Sbjct: 477 TALVDMYAKCGAIMIARL------------------IFDMMSERHVTTWNAMIDGYGTHG 518

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
               A+  F  M +  I+P+ ++F++V  A S  G
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A +L  C+ +  +   +Q+     +  L Q  F  T L+ ++ + G ++ AA VF  I  
Sbjct: 41  ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K +V Y TM+ G+ +    ++AL  F  M+   +EP    F  +L  C     +  G +I
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157

Query: 637 FDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             L+    K   S + +      +M  +  +V EA +    + E    L  W +++    
Sbjct: 158 HGLL---VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD--LVSWNTIVAGYS 212

Query: 695 LHGHSELAEVVAKKLLEMDTRNS 717
            +G + +A  + K + E + + S
Sbjct: 213 QNGMARMALEMVKSMCEENLKPS 235


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 208/562 (37%), Positives = 322/562 (57%), Gaps = 27/562 (4%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           + +DLFV S+ +  Y +      ARK+FD  LER+T +WNTM+ G V+N+   EAI +F 
Sbjct: 137 FGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFG 196

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL-----------HAYIIKNFVAL---- 363
            +++   I FD  T  + L  V++LQ+L LG  +           HAY+I     L    
Sbjct: 197 DMVK-GGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255

Query: 364 -----PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                  ++   + + D+VS+N MIS +  N   +  + L  E+   G  ++S ++  L+
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
                  +  + +  H +  + G+       + L  +Y++   I++AR +F+  +S ++ 
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFD--ESSEKS 373

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
            A+WNAMI+GY QNGL E+A   F++M +  V PN VT+ S+L AC  +G + LGK +H 
Sbjct: 374 LASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD 433

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
              R   + N+FV T+LIDMY+K G I  A  +F+ +PEKN+VT+  MI GYG HG    
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHE 493

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           AL+LF  M    + P  +TF++VL ACS+AGLV EG +IF  M  ++  +P  EHY C+ 
Sbjct: 494 ALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMV 553

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G + +A +F++++  E     +WG+LLG+C +H  + LA + + KL E+D +N 
Sbjct: 554 DLLGRAGNLDKALDFIRKMPVEPGP-PVWGALLGACMIHKDANLARLASDKLFELDPQNV 612

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GY+VLLSNIY+   N+     VR  ++ R L K  GC+ I+V   ++ F S DQ HPQ
Sbjct: 613 --GYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQ 670

Query: 778 SHKIYEMLERLAMEMRNAGNKT 799
           +  IY MLE+L  +MR AG +T
Sbjct: 671 ATAIYAMLEKLTGKMREAGFQT 692



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 164/590 (27%), Positives = 264/590 (44%), Gaps = 85/590 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  LF +I  P   ++N +I  F  NN P  A+ LY+ ++KS+P    DN+TY+ V+   
Sbjct: 61  ASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEP-DNFTYAFVISGA 119

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +      +  A     I        FV ++++  Y              K+  V  ++  
Sbjct: 120 SSLGLGLLLHAHS---IVAGFGSDLFVGSAIVACY-------------FKFSRVAAAR-- 161

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD M  R+ V WNT+VS  VK   + EA+  F  M++ GI   + +   V P ++
Sbjct: 162 ---KVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVA 218

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L D      +  L +K+G  + +  +V +    +Y++ G  + AR +F    + +   +
Sbjct: 219 ELQDLALGMGIQCLAMKVG--FHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSY 276

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY  NN    ++ LF ++L   E V +  + +  +        L L + +H +  
Sbjct: 277 NAMISGYTCNNETESSVRLFKELLVSGEKV-NSSSIVGLIPVFFPFGHLHLTRCIHGFCT 335

Query: 358 K--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K                    N +    ++ +   E+ + SWN MIS + QNGL ++ + 
Sbjct: 336 KSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAIS 395

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDM 454
           L  EMQK     + VTVT++LSA + L    +GK  H  + R    FE    + + LIDM
Sbjct: 396 LFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRES--FESNIFVSTALIDM 453

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G I  A+++F      +++  TWNAMI+GY  +G   EA   F +ML   V+P  V
Sbjct: 454 YAKCGSITEAQRLFSMMP--EKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGV 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  SVL AC+  G +  G ++                        +S V ++    F  +
Sbjct: 512 TFLSVLYACSHAGLVREGDEIF-----------------------RSMVHDHG---FEPL 545

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           PE     Y  M+   G+ G  ++AL   R M    +EP    + A+L AC
Sbjct: 546 PEH----YACMVDLLGRAGNLDKALDFIRKMP---VEPGPPVWGALLGAC 588


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 230/698 (32%), Positives = 376/698 (53%), Gaps = 49/698 (7%)

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           R G+A+H   ++  +     V NSL+N YS    SL   ++   +             VF
Sbjct: 29  RHGEALHAWALKSGAASHAPVANSLINFYS----SLPRPLLAAAFA------------VF 72

Query: 184 DTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLG 240
           D +    R+V +WN++++  +   R ++A+ +FR ML    + PS  SF   F A +   
Sbjct: 73  DDIPPAARDVTSWNSLLN-PLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAA 131

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
              +    + L  K+ S  V++++V +S + MY +LG    AR++FD   +RN+  W+TM
Sbjct: 132 SAPAGTAAHALACKIPSA-VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTM 190

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY       EA +LF  +LE       +    + LSAVS    L +G+Q+H  I+K+ 
Sbjct: 191 VAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDG 250

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   V V N+++                    ER+ ++W+ MI+ + QNG  D  + +  
Sbjct: 251 LLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFS 310

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M   GF     T   +L+A+S+L    VGKQ H  +++ G   +  ++S L+DMYAK G
Sbjct: 311 QMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCG 370

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A++ F++    + D   W AM++G+ QNG  EEA   + +M +  + P+  TIAS 
Sbjct: 371 CIADAKEGFDQ--LYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASG 428

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +  +E GKQLH   ++Y L     VG++L  MYSK G +    +VF +IP+++ 
Sbjct: 429 LRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDV 488

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + ++I G+ Q+G    AL LF  MK  G  PD ITF+ +L ACS+ GLVD G + F L
Sbjct: 489 IAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSL 548

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGH 698
           M ++Y + P  +HY C+ D+L R G + EA +F++ +  + G  L  W  +LG+CR    
Sbjct: 549 MTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCL--WRIVLGACRSLRD 606

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ++     ++L+E+ T +S    ++LLSNIYA +  W +V++VR  MR RG+ K+ GCSW
Sbjct: 607 FDVGAYAGERLMELGTGDS--SAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSW 664

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +++   V+ F   +Q+HP++  I   L RLA  M++ G
Sbjct: 665 VELNSRVHVFVVGEQQHPEAENINAQLRRLAKHMKDEG 702



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 222/466 (47%), Gaps = 46/466 (9%)

Query: 28  HSLSPPIPKLKTPT--IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           H+L+  IP   +      S L+  C+ G    AR++FD + +  +  W+T++ G+     
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             EA  L+  M +  P    + +  ++VL A +    L +G+ +H   ++        V 
Sbjct: 200 SEEAFDLFRLMLEECPSEKSE-FVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 258

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSL+ MY+       A  +G  +             VF++ R RN + W+ +++ Y +  
Sbjct: 259 NSLVTMYAK------AGCMGAAF------------HVFESSRERNSITWSAMITGYAQNG 300

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
               AV  F  M   G  P+  +FV V  A S LG        +GL+VKLG E    ++V
Sbjct: 301 EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV--QIYV 358

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            S+ + MYA+ GC   A++ FD   E +  +W  M+ G+VQN    EA+ L+ + ++ + 
Sbjct: 359 KSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYAR-MDKEG 417

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL--PV------------------ 365
           I+    T  S L A + +  L+ G+QLH  I+K  + L  PV                  
Sbjct: 418 IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGM 477

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V   + +RDV++WN++IS F QNG  +  L L  EM+ +G + D++T   +L A S++ 
Sbjct: 478 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMG 537

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
             D G +  + + +       ++ Y  ++D+ +++G++K A+   E
Sbjct: 538 LVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 583


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 219/637 (34%), Positives = 359/637 (56%), Gaps = 32/637 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           VFD M  +N++ W+++VS Y +     EA+  F  +  + G  P+     +V  A + LG
Sbjct: 106 VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    ++G +V+ G  +  D++V +S I  Y++ G  + AR +FD   E+    W T+
Sbjct: 166 VVEKGAQLHGFVVRSG--FDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTI 223

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY +      ++ELF Q+ E + +V D     S LSA S L+ L+ G+Q+HAY+++  
Sbjct: 224 IAGYTKCGRSAVSLELFAQMRETN-VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
             + V V+N +I+                    ++++SW TMIS ++QN  D E + L  
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 342

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSG 459
           EM + G+  D    T++L++  +    + G+Q HAY ++  +   E +++ LIDMYAKS 
Sbjct: 343 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSN 402

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           L+  A+++F+     +++  ++NAMI GY+    L EA   F +M      PN  T A++
Sbjct: 403 LLIDAKKVFDV--MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAAL 460

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A + + ++  G+Q H   ++  LD   FV  +L+DMY+K G I  A  +F     ++ 
Sbjct: 461 ITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDV 520

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V + +MI  + QHG +E AL +FR M   GI+P+ +TFVAVLSACS+AG V++GL  F+ 
Sbjct: 521 VCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNS 580

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M   + I+P TEHY CV  +LGR GK+ EA EF++++  E   + +W SLL +CR+ G+ 
Sbjct: 581 MPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI-VWRSLLSACRIAGNV 638

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL +  A+  +  D ++S  G ++LLSNI+A +G W +V KVR  M    + KE G SWI
Sbjct: 639 ELGKYAAEMAISTDPKDS--GSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 696

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V   VN F ++D  H ++  I  +L+ L   ++ AG
Sbjct: 697 EVNNKVNVFIARDTTHREA-DIGSVLDILIQHIKGAG 732



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 165/614 (26%), Positives = 279/614 (45%), Gaps = 88/614 (14%)

Query: 46  LSKICQEG-RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           L  +C +  R   AR +FD +     + W++++  +       EA++++  +++ S    
Sbjct: 90  LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSG-EH 148

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            + +  +SV++AC +   +  G  +H   +R   +   +V  SL++ YS   +  +A + 
Sbjct: 149 PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARL- 207

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                            VFD +  +  V W TI++ Y K  R   ++  F  M    + P
Sbjct: 208 -----------------VFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
                 +V  A S L   +    ++  +++ G+E   D+ V +  I  Y +       RK
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM--DVSVVNVLIDFYTKCNRVKAGRK 308

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD  + +N   W TMI GY+QN+   EA++LF ++  L     D     S L++    +
Sbjct: 309 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKP-DGFACTSVLTSCGSRE 367

Query: 345 ELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMIS 384
            L+ G+Q+HAY IK       FV   +I              V + + E++V+S+N MI 
Sbjct: 368 ALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIE 427

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +       E L L +EM+ +    +  T  AL++AASNL +   G+Q H  L++ G+ F
Sbjct: 428 GYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDF 487

Query: 445 -EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+DMYAK G I+ AR++F  N S  RD   WN+MI+ + Q+G  EEA   FR+
Sbjct: 488 CPFVTNALVDMYAKCGSIEEARKMF--NSSIWRDVVCWNSMISTHAQHGEAEEALGMFRE 545

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELG----KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           M++  + PN VT  +VL AC+  G +E G      + GF I+   +    V    + +  
Sbjct: 546 MMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACV----VSLLG 601

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           +SG +  A     K+P                                  IEP AI + +
Sbjct: 602 RSGKLFEAKEFIEKMP----------------------------------IEPAAIVWRS 627

Query: 620 VLSACSYAGLVDEG 633
           +LSAC  AG V+ G
Sbjct: 628 LLSACRIAGNVELG 641



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 242/504 (48%), Gaps = 32/504 (6%)

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP    F N+     S        +++G ++  G +  +D F+A+  I + ++    D 
Sbjct: 45  LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ--SDTFLANILINVCSKSDRVDN 102

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD    +N   W++M+  Y Q  +  EA+ +FV +        ++    S + A +
Sbjct: 103 ARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACT 162

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNT 381
           QL  ++ G QLH +++++      +V   +I              V + + E+  V+W T
Sbjct: 163 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 222

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+ + + G     L L  +M++   + D   V+++LSA S L   + GKQ HAY+LR G
Sbjct: 223 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + + LID Y K   +K  R++F++     ++  +W  MI+GY QN    EA   
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV--KNIISWTTMISGYMQNSFDWEAMKL 340

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M      P+     SVL +C     +E G+Q+H ++I+  L+ + FV   LIDMY+K
Sbjct: 341 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 400

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           S ++  A  VF  + E+N ++Y  MI GY        AL LF  M+    +P+  TF A+
Sbjct: 401 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAAL 460

Query: 621 LSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE-FVKELGE 678
           ++A S    +  G Q  + L++      P   +   + DM  + G + EA + F   +  
Sbjct: 461 ITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR 518

Query: 679 EGNVLEIWGSLLGSCRLHGHSELA 702
           +   +  W S++ +   HG +E A
Sbjct: 519 D---VVCWNSMISTHAQHGEAEEA 539



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 155/606 (25%), Positives = 257/606 (42%), Gaps = 100/606 (16%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    AR +FD ++  T V W TII G+        ++ L++QM++++     D Y  
Sbjct: 198 KNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP--DRYVV 255

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC+    L  GK +H + +R  +     V N L++ Y+ C               
Sbjct: 256 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC--------------- 300

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              ++     K+FD M  +N+++W T++S Y++     EA++ F  M R+G +P   +  
Sbjct: 301 ---NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACT 357

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  +  S    +    V+   +K   E  +D FV +  I MYA+      A+K+FD   
Sbjct: 358 SVLTSCGSREALEQGRQVHAYTIKANLE--SDEFVKNGLIDMYAKSNLLIDAKKVFDVMA 415

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELDLG 349
           E+N   +N MI GY       EA+ELF ++ + L +   ++ TF + ++A S L  L  G
Sbjct: 416 EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKP--NEFTFAALITAASNLASLRHG 473

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           QQ H  ++K  +     V NA+++                    RDVV WN+MIS   Q+
Sbjct: 474 QQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQH 533

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G  +E L +  EM K+G   + VT  A+LSA S+    + G      +   GI   G E 
Sbjct: 534 GEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIK-PGTEH 592

Query: 450 Y--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           Y  ++ +  +SG +  A++  EK                                     
Sbjct: 593 YACVVSLLGRSGKLFEAKEFIEKMP----------------------------------- 617

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSI--------RYLLDQNVFVGTSLI---- 555
            + P  +   S+L AC   GN+ELGK     +I         Y+L  N+F    +     
Sbjct: 618 -IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVK 676

Query: 556 ---DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
              D    S V+      + ++  K +V +      + +  +      L + +KG G  P
Sbjct: 677 KVRDRMDSSEVVKEPGRSWIEVNNKVNV-FIARDTTHREADIGSVLDILIQHIKGAGYVP 735

Query: 613 DAITFV 618
           DA   +
Sbjct: 736 DATALL 741



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 19/205 (9%)

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K +HG  I   L  + F+   LI++ SKS  ++ A  VF K+P KN +T+++M+  Y Q 
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 593 GMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM-----QQEYKI 646
           G SE AL +F  + +  G  P+     +V+ AC+  G+V++G Q+   +      Q+  +
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 188

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVV 705
             S      + D   + G + EA     +L E+  V   W +++      G S ++ E+ 
Sbjct: 189 GTS------LIDFYSKNGNIEEARLVFDQLSEKTAV--TWTTIIAGYTKCGRSAVSLELF 240

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYA 730
           A    +M   N +P  +V+ S + A
Sbjct: 241 A----QMRETNVVPDRYVVSSVLSA 261


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 221/636 (34%), Positives = 350/636 (55%), Gaps = 34/636 (5%)

Query: 189 RNVVAWNTIVSWYVKT--ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           R+ V W  ++  +      R  +AV  FR MLR G+ P  ++   V     + G   +A 
Sbjct: 97  RDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAI 156

Query: 247 VVYGL---LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
           ++  L    +KLG  + N + V ++ +  Y + G    AR++F     R++  +N M+ G
Sbjct: 157 IIASLHPFALKLGLLHSN-VVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMG 215

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN---- 359
             +     EA++LF   +    +     TF + L+  + + +L LG+Q+H  + +     
Sbjct: 216 CSKEGSHAEALDLFA-AMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATSSN 274

Query: 360 -FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            FV   ++              + + +IERD VS+N MI+ +  N      L L  EMQ 
Sbjct: 275 VFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQS 334

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKT 463
             F   ++   +LLS A ++ +  +GKQ HA L+  G+  E +  + LIDMY+K G++  
Sbjct: 335 LSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDA 394

Query: 464 ARQIF-EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           A+  F  KND   +   +W AMI G  QNG  EEA   F  M    ++P+  T +S + A
Sbjct: 395 AKTNFINKND---KTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKA 451

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
            + +  I LG+QLH + IR     +VF G++L+DMY+K G ++ A   F ++PE+NS+++
Sbjct: 452 SSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISW 511

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             +I  Y  +G ++ A+ +F  M   G +PD++TF++VLSACS+ GL +E ++ F+LM+ 
Sbjct: 512 NAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEY 571

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           EY I P  EHY CV D LGRVG+  +  E + E+  E + + IW S+L SCR HG+ +LA
Sbjct: 572 EYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPI-IWSSILHSCRTHGNQDLA 630

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
            V A+KL  M + ++ P  +V+LSNI+A+ G WE+   V+K MR+RGLRKE G SW++V 
Sbjct: 631 RVAAEKLFSMGSTDATP--YVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVK 688

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
             V  F+S DQ +P   +I + LERL  EM   G K
Sbjct: 689 HKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYK 724



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 163/648 (25%), Positives = 282/648 (43%), Gaps = 64/648 (9%)

Query: 46  LSKICQEGRPHLARQLFDSIT-RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           L  +   GR   AR LFD +  R      N ++ G+  +     A  L+     SSP   
Sbjct: 41  LHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAAHHLF----LSSPPHL 96

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHC--HFIRCFSNPSRFVYNSLLNM----------- 151
            D  T++ ++ A A     R   AV      +R    P R    ++LN+           
Sbjct: 97  RDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNLPPASGGTAAAI 156

Query: 152 -------YSTCLSSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWY 201
                  ++  L  L + +V    +   Y K+ L+    +VF  M  R+ V +N ++   
Sbjct: 157 IIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGC 216

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            K   + EA+  F  M R G+  +  +F  V    + +GD      V+GL+ +  S   +
Sbjct: 217 SKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATS---S 273

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           ++FV +S +  Y++  C D  +K+F   +ER+   +N MI GY  N      + LF    
Sbjct: 274 NVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLF---R 330

Query: 322 ELDEIVFDD--VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
           E+  + FD   + + S LS    +  + +G+Q+HA ++   ++   +V NA+I       
Sbjct: 331 EMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCG 390

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        ++  VSW  MI+  VQNG  +E L L   M++ G   D  T ++ + 
Sbjct: 391 MLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIK 450

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A+SNL    +G+Q H+YL+R G H   +   S L+DMY K G +  A Q F+  +  +R+
Sbjct: 451 ASSNLAMIGLGRQLHSYLIRSG-HMSSVFSGSALLDMYTKCGCLDEALQTFD--EMPERN 507

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQLH 536
             +WNA+I+ Y   G  + A   F  ML +   P+ VT  SVL AC+  G   E  K   
Sbjct: 508 SISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFE 567

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMS 595
                Y +       + +ID   + G  +    +  ++P E + + +++++     HG  
Sbjct: 568 LMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQ 627

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           + A      +   G   DA  +V + +  + AG  ++   +  +M+  
Sbjct: 628 DLARVAAEKLFSMG-STDATPYVILSNIFAKAGKWEDAAGVKKIMRDR 674


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 243/823 (29%), Positives = 402/823 (48%), Gaps = 87/823 (10%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTT-------------------- 70
           S P P L T +  + +S   Q G PH A  +FD +                         
Sbjct: 107 SAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLD 166

Query: 71  ----------------VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
                           V WN +I G        EA+  + QM K    +S    T +SVL
Sbjct: 167 DACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSS--RSTLASVL 224

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            A A    L  G  VH H I+     S +V +SL+NMY  C    DA             
Sbjct: 225 SAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDAR------------ 272

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD + ++N++ WN ++  Y +       +  F  M+  GI P   ++ ++  
Sbjct: 273 ------QVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILS 326

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             +     +    ++  ++K    + ++LFV ++ I MYA+ G    A K F++   R+ 
Sbjct: 327 TCACFEYLEVGRQLHSAIIK--KRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDH 384

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ      A  LF +++ LD IV D+V+  S LSA   ++ L+ GQQ H 
Sbjct: 385 ISWNAIIVGYVQEEVEAGAFSLFRRMI-LDGIVPDEVSLASILSACGNIKVLEAGQQFHC 443

Query: 355 YIIK-----NFVALPVIV---------------LNAVIERDVVSWNTMISAFVQNGLDDE 394
             +K     N  A   ++                +++ ER VVS N +I+ +       E
Sbjct: 444 LSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKE 502

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLI 452
            + L++EMQ  G     +T  +L+          +G Q H  +++ G+    E + + L+
Sbjct: 503 SINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLL 562

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY  S  +  A  +F +  S  +    W A+I+G+ QN   + A   +R+M ++N++P+
Sbjct: 563 GMYMDSQRLADANILFSEFSS-LKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPD 621

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             T  +VL AC  + ++  G+++H        D +    ++L+DMY+K G +  +  VF 
Sbjct: 622 QATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFE 681

Query: 573 KIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           ++  +K+ +++ +MI+G+ ++G ++ AL +F  M    I PD +TF+ VL+ACS+AG V 
Sbjct: 682 ELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVY 741

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG QIFD+M   Y I+P  +HY C+ D+LGR G + EA EF+ +L  E N + IW +LLG
Sbjct: 742 EGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAM-IWANLLG 800

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG  +  +  AKKL+E++ ++S P  +VLLSN+YA  GNW+    +R+ M ++ ++
Sbjct: 801 ACRIHGDEKRGQRAAKKLIELEPQSSSP--YVLLSNMYAASGNWDEARSLRRTMIKKDIQ 858

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           K  GCSWI VG   N F + D  H    +I + L+ L   +++
Sbjct: 859 KIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKD 901



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 195/674 (28%), Positives = 324/674 (48%), Gaps = 88/674 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV- 164
           D +T++  L ACA+ +NL +G+AVH   I+     + F   +L+++Y+ C S   A  + 
Sbjct: 46  DQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIF 105

Query: 165 -----------------------GLKY-------------------------VEVDYSKY 176
                                  GL +                           +   K 
Sbjct: 106 ASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKL 165

Query: 177 DLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           D  C++F  M    RNVVAWN ++S + KT  Y EA+  F  M + G++ S  +  +V  
Sbjct: 166 DDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLS 225

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A++SL       +V+   +K G E  + ++VASS I MY +    D AR++FD   ++N 
Sbjct: 226 AIASLAALNHGLLVHAHAIKQGFE--SSIYVASSLINMYGKCQMPDDARQVFDAISQKNM 283

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            VWN M+G Y QN      +ELF+ ++    I  D+ T+ S LS  +  + L++G+QLH+
Sbjct: 284 IVWNAMLGVYSQNGFLSNVMELFLDMISCG-IHPDEFTYTSILSTCACFEYLEVGRQLHS 342

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
            IIK      + V NA+I+                    RD +SWN +I  +VQ  ++  
Sbjct: 343 AIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAG 402

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYL 451
              L   M   G + D V++ ++LSA  N++  + G+Q H   ++ G+    F G  S L
Sbjct: 403 AFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAG--SSL 460

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           IDMY+K G IK A + +  +   +R   + NA+IAGY      +E+     +M    + P
Sbjct: 461 IDMYSKCGDIKDAHKTY--SSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKP 517

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           + +T AS++  C     + LG Q+H   + R LL  + F+GTSL+ MY  S  +  A  +
Sbjct: 518 SEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANIL 577

Query: 571 FAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           F++    K+ V +T +I G+ Q+  S+ AL+L+R M+   I PD  TFV VL AC+    
Sbjct: 578 FSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSS 637

Query: 630 VDEGLQIFDLM-QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           + +G +I  L+    + +   T     + DM  + G V  + +  +EL  + +V+  W S
Sbjct: 638 LHDGREIHSLIFHTGFDLDELTSS--ALVDMYAKCGDVKSSVQVFEELATKKDVIS-WNS 694

Query: 689 LLGSCRLHGHSELA 702
           ++     +G+++ A
Sbjct: 695 MIVGFAKNGYAKCA 708



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 237/497 (47%), Gaps = 34/497 (6%)

Query: 194 WNTIVSWYVKTERYV--EAVRQFRM-MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           WN    W V+  ++   E V QF    +  G  P   +F     A + L +      V+ 
Sbjct: 16  WN----WRVQGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL--ERNTEVWNTMIGGYVQNN 308
            ++K G E  +  F   + I +YA+      AR IF +      +T  W  +I GYVQ  
Sbjct: 72  CVIKSGLESTS--FCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG 129

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
            P EA+ +F ++   +  V D V  ++ L+A   L +LD   QL       F  +P+ + 
Sbjct: 130 LPHEALHIFDKMR--NSAVPDQVALVTVLNAYISLGKLDDACQL-------FQQMPIPI- 179

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                R+VV+WN MIS   +    +E L   ++M K G      T+ ++LSA ++L   +
Sbjct: 180 -----RNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN 234

Query: 429 VGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            G   HA+ ++ G  FE    + S LI+MY K  +   ARQ+F+      ++   WNAM+
Sbjct: 235 HGLLVHAHAIKQG--FESSIYVASSLINMYGKCQMPDDARQVFDA--ISQKNMIVWNAML 290

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
             Y+QNG L      F  M+   + P+  T  S+L  C     +E+G+QLH   I+    
Sbjct: 291 GVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFT 350

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            N+FV  +LIDMY+K+G +  A   F  +  ++ +++  +I+GY Q  +   A SLFR M
Sbjct: 351 SNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRM 410

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
              GI PD ++  ++LSAC    +++ G Q F  +  +  ++ +      + DM  + G 
Sbjct: 411 ILDGIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGD 469

Query: 666 VVEAYEFVKELGEEGNV 682
           + +A++    + E   V
Sbjct: 470 IKDAHKTYSSMPERSVV 486


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 241/811 (29%), Positives = 400/811 (49%), Gaps = 116/811 (14%)

Query: 44  SRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSP 101
           SRL ++ CQ G    AR++FD ++      W T I+   C    YE  I L+  M     
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSW-TAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCH-------------------FIRC------ 136
               D++ +  V KAC+E +N R+GK V+ +                   FI+C      
Sbjct: 187 RP--DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244

Query: 137 ------FSNPSRFVYNSLLNMYST---------CLSSLDAEMVGLKYVEVDYS------- 174
                       F++N +++ Y++         C+S  D ++ G+K  +V ++       
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCIS--DMKLSGVKPDQVTWNAIISGYA 302

Query: 175 ---KYDLVCKVFDTMR-----RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
              +++   K F  M      + NVV+W  +++   +     EA+  FR M+  G++P++
Sbjct: 303 QSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNS 362

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           I+  +   A ++L   +    ++G  +K+  E  +DL V +S +  YA+    + AR+ F
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKV-EELDSDLLVGNSLVDYYAKCRSVEVARRKF 421

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               + +   WN M+ GY       EAIEL      L E+ F                  
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIEL------LSEMKFQG---------------- 459

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                                    IE D+++WN +++ F Q G     L     M   G
Sbjct: 460 -------------------------IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              ++ T++  L+A   +RN  +GK+ H Y+LR+ I    G+ S LI MY+    ++ A 
Sbjct: 495 MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVAC 554

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F +  +  RD   WN++I+   Q+G    A    R+M   NV  N VT+ S LPAC+ 
Sbjct: 555 SVFSELST--RDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 612

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  +  GK++H F IR  LD   F+  SLIDMY + G I  +  +F  +P+++ V++  M
Sbjct: 613 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 672

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I  YG HG    A++LF+  +  G++P+ ITF  +LSACS++GL++EG + F +M+ EY 
Sbjct: 673 ISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYA 732

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           + P+ E Y C+ D+L R G+  E  EF++++  E N   +WGSLLG+CR+H + +LAE  
Sbjct: 733 MDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNA-AVWGSLLGACRIHCNPDLAEYA 791

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ L E++ ++S  G +VL++NIY+  G WE+  K+R  M+ERG+ K  GCSWI+V   +
Sbjct: 792 ARYLFELEPQSS--GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKL 849

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + F   D  HP   +I   +E L  +++  G
Sbjct: 850 HSFVVGDTSHPLMEQISAKMESLYFDIKEIG 880



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 180/695 (25%), Positives = 313/695 (45%), Gaps = 104/695 (14%)

Query: 15  PTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWN 74
           P  T P   LP  +         K+  +R +L+          ARQ     +   +V  N
Sbjct: 18  PKGTSPLQTLPTRNCCIVASTNTKSQNLR-KLTN---------ARQRITGFSGGGSVHRN 67

Query: 75  TIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
            ++     NN    A +L S M  ++P    +   Y+S+L+ C +  NLR+G  VH   +
Sbjct: 68  GVL-----NN----AAMLLSSMDLTNPDECIE--IYASILQKCRKLYNLRLGFQVHAQLV 116

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
               +   F+ + LL +Y       DA                   ++FD M  RNV +W
Sbjct: 117 VNGVDVCEFLGSRLLEVYCQTGCVEDAR------------------RMFDKMSERNVFSW 158

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
             I+  Y     Y E ++ F +M+  G+RP    F  VF A S L +Y+    VY  ++ 
Sbjct: 159 TAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS 218

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           +G E   +  V  S + M+ + G  D AR+ F+    ++  +WN M+ GY       +A+
Sbjct: 219 IGFE--GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ--LHAYIIKNFVALPVIVLNAVI 372
           +  +  ++L  +  D VT+ + +S  +Q  + +   +  L    +K+F            
Sbjct: 277 KC-ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF------------ 323

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           + +VVSW  +I+   QNG D E L +  +M  +G   +S+T+ + +SA +NL     G++
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383

Query: 433 THAYLLRHGIHFEGMES------YLIDMYAKSGLIKTARQIF---EKND----------- 472
            H Y ++     E ++S       L+D YAK   ++ AR+ F   ++ D           
Sbjct: 384 IHGYCIK----VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439

Query: 473 --SGDRDQA-----------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
              G  ++A                 TWN ++ G+TQ G  + A   F++M    + PN 
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNT 499

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            TI+  L AC  + N++LGK++HG+ +R  ++ +  VG++LI MYS    +  A +VF++
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++ V + ++I    Q G S  AL L R M    +E + +T V+ L ACS    + +G
Sbjct: 560 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619

Query: 634 LQIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKV 666
            +I   +    +    T ++    + DM GR G +
Sbjct: 620 KEIHQFI---IRCGLDTCNFILNSLIDMYGRCGSI 651



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 205/470 (43%), Gaps = 72/470 (15%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ S  + +Y + GC + AR++FD   ERN   W  ++  Y       E I+LF  ++  
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVN- 183

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
           + +  D   F     A S+L+   +G+ ++ Y++         V  ++++          
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     +DV  WN M+S +   G   + L  + +M+  G   D VT  A++S  + 
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYA- 302

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
                               FE    Y ++M    GL     + F+ N        +W A
Sbjct: 303 ----------------QSGQFEEASKYFLEM---GGL-----KDFKPN------VVSWTA 332

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY- 542
           +IAG  QNG   EA   FR+M+   V PN +TIAS + AC  +  +  G+++HG+ I+  
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD ++ VG SL+D Y+K   +  A   F  I + + V++  M+ GY   G  E A+ L 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             MK  GIEPD IT+  +++  +  G     L+ F  M     + P+T     ++  L  
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHS-MGMDPNTTT---ISGALAA 508

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
            G+V        +LG+     EI G +     L  H EL+  V   L+ M
Sbjct: 509 CGQVRNL-----KLGK-----EIHGYV-----LRNHIELSTGVGSALISM 543



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           +NG+L  A +    M   N    +   AS+L  C  + N+ LG Q+H   +   +D   F
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +G+ L+++Y ++G +  A  +F K+ E+N  ++T ++  Y   G  E  + LF  M   G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGK 665
           + PD   F  V  ACS       G  ++D     Y +    E   CV     DM  + G+
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYD-----YMLSIGFEGNSCVKGSILDMFIKCGR 240

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           +  A  F +E+  E   + +W  ++      G  + A      +     +     ++ ++
Sbjct: 241 MDIARRFFEEI--EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298

Query: 726 SNIYAEEGNWENVDKVRKEM 745
           S  YA+ G +E   K   EM
Sbjct: 299 SG-YAQSGQFEEASKYFLEM 317


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 230/733 (31%), Positives = 383/733 (52%), Gaps = 51/733 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR+LF  I  P  V WN +I G        EAI  + ++KK+    +    +  S
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT--RSSLGS 314

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL A A    L  G  VH   I+   + + +V ++L+NMY+ C                 
Sbjct: 315 VLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKC----------------- 357

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            SK D   +VF+++  RN+V WN ++  + +     E +  F  M R G +P   +F ++
Sbjct: 358 -SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSI 416

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A +SL        ++ +++K  +++ ++LFVA++ + MYA+ G    ARK F+     
Sbjct: 417 FSACASLHYLDFGGQLHTVMIK--NKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIH 474

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I GYVQ  +  EA  +F +++  + ++ D+V+  S +SA + ++E   GQQ 
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVS-NGVLPDEVSLASIVSACANVKEFKQGQQC 533

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  ++K  +       +++I+                    R+VVS N +I+ +  + L+
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE 593

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESY 450
            E + L  E+Q  G     VT   LL         ++G+Q H  +++ G     E +   
Sbjct: 594 -EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ MY  S     +  +F +     +    W A+I+GY Q    E+A   ++ M   N+ 
Sbjct: 653 LLCMYMNSQRFADSETLFSELQY-PKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T ASVL AC  M +++ G+++H        + +    +SLIDMY+K G +  +  V
Sbjct: 712 PDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQV 771

Query: 571 FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           F ++P +NSV ++ +MI+G  ++G +E AL +F+ M+   I PD +TF+ VLSACS+AG 
Sbjct: 772 FHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V EG ++FDLM   YK+QP  +H  C+ D+LGR G + EA EF+ +LG + + + +W +L
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM-LWSTL 890

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR HG     +  A KL+E+  ++S    +VLLS +YAE  NW   D +R+EM+ +G
Sbjct: 891 LGACRKHGDEVRGKRAANKLMELKPQSSSS--YVLLSGLYAESENWSGADSLRREMKLKG 948

Query: 750 LRKEVGCSWIDVG 762
           ++K  G SWI+ G
Sbjct: 949 VKKLPGYSWIEPG 961



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 192/730 (26%), Positives = 337/730 (46%), Gaps = 85/730 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A++ F  + +     WN+++  ++ + L    +  +  M         + +T++ 
Sbjct: 90  GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHG--VRPNEFTFAM 147

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC+  +++  GK VHC   +       F    L++MY+ C +  DA +V    + +D
Sbjct: 148 VLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLD 207

Query: 173 YSKYDLV-------------CKVFDTMRR------------------------------- 188
              +  +              KVFD M+R                               
Sbjct: 208 TVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFT 267

Query: 189 ----RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
                NVVAWN ++S + K     EA+  F  + + G++ +  S  +V  A++SL     
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
             +V+   +K G +  ++++V S+ + MYA+    D A+++F++  ERN  +WN M+GG+
Sbjct: 328 GSMVHAQAIKEGLD--DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN    E +E F   ++      D+ TF S  SA + L  LD G QLH  +IKN     
Sbjct: 386 AQNGLAQEVMEFF-SYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSN 444

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + V NA+++                     D VSWN +I  +VQ   +DE   +   M  
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKT 463
            G + D V++ +++SA +N++    G+Q H  L++ G+       S LIDMY K G++  
Sbjct: 505 NGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR +F       R+  + NA+IAGYT +  LEEA   F+++    + P  VT A +L  C
Sbjct: 565 ARDVFYSMPY--RNVVSINALIAGYTMSH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621

Query: 524 NPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVT 581
           +    + LG+Q+HG  +++  L  +  V  SL+ MY  S     +  +F+++   K  V 
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVV 681

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T +I GY Q    E+AL  ++ M+   I PD  TF +VL AC+    +  G ++  L+ 
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLI- 740

Query: 642 QEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             +    + +   C  + DM  + G V  + +   E+    +V+  W S++     +G++
Sbjct: 741 --FHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVIS-WNSMIVGLAKNGYA 797

Query: 700 ELAEVVAKKL 709
           E A  + K++
Sbjct: 798 EEALEIFKQM 807



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 201/426 (47%), Gaps = 61/426 (14%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           +Y + G  DFA+K F    +++   WN+++  Y+ +      ++ FV +     +  ++ 
Sbjct: 85  LYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWN-HGVRPNEF 143

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAV 371
           TF   LSA S LQ+++ G+Q+H  + K      +F    +I              V +  
Sbjct: 144 TFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGA 203

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           +  D VSW T+I+ +V++G   E + +  +MQ+ G + D + +  +++A           
Sbjct: 204 LNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA----------- 252

Query: 432 QTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
                                  Y   G +  AR++F +    + +   WN MI+G+ + 
Sbjct: 253 -----------------------YVALGRLADARKLFTQIP--NPNVVAWNVMISGHAKR 287

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  EEA   F ++ +  +     ++ SVL A   +  +  G  +H  +I+  LD NV+VG
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVG 347

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           ++L++MY+K   ++ A  VF  + E+N V +  M+ G+ Q+G+++  +  F  MK  G +
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQ 407

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA-- 669
           PD  TF ++ SAC+    +D G Q+  +M +  K   +      + DM  + G + EA  
Sbjct: 408 PDEFTFTSIFSACASLHYLDFGGQLHTVMIKN-KFTSNLFVANALVDMYAKSGALKEARK 466

Query: 670 -YEFVK 674
            +EF+K
Sbjct: 467 QFEFMK 472



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 56/108 (51%)

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +   K +H  S++  +     +G  ++D+Y K G +++A   F+++ +K+   + +++  
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           Y  HG+    +  F  M   G+ P+  TF  VLSACS    ++ G Q+
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQV 164


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 242/780 (31%), Positives = 392/780 (50%), Gaps = 55/780 (7%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           P  R          R + A  LFD         + +++ GF  +    EA  L+  ++  
Sbjct: 32  PNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHL 91

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
                C    +SSVLK  A   +   G+ +HC  I+             L+  S   S +
Sbjct: 92  GMEMDCS--IFSSVLKVSATLCDELFGRQLHCQCIKF----------GFLDDVSVGTSLV 139

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           D  M G        S +     VFD M+ RNVV W T++S Y +     E +  F  M  
Sbjct: 140 DTYMKG--------SNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQD 191

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G +P++ +F      L+  G       V+ ++VK G +    + V++S I +Y + G  
Sbjct: 192 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLYLKCGNV 249

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             AR +FD    ++   WN+MI GY  N   +EA+ +F   + L+ +   + +F S +  
Sbjct: 250 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS-MRLNHVRLSESSFASIIKL 308

Query: 340 VSQLQELDLGQQLHAYIIK-NFV-------ALPVIVLNAVIERD-------------VVS 378
            + L+EL   +QLH  ++K  FV       AL V     +   D             VVS
Sbjct: 309 CANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVS 368

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W  MIS F+QN   +E + L  EM+++G   +  T + +L+A   +   +V    HA ++
Sbjct: 369 WTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVV 424

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           +        + + L+D Y K G +  A ++F   D  ++D   W+AM+AGY Q G  E A
Sbjct: 425 KTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID--NKDIVAWSAMLAGYAQAGETEAA 482

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
              F ++ +  V PN  T +S+L  C     ++  GKQ HGF+I+  LD ++ V ++L+ 
Sbjct: 483 IKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLT 542

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY+K G I  A  VF +  EK+ V++ +MI GY QHG + +AL +F+ MK   ++ D++T
Sbjct: 543 MYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVT 602

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           F+ V +AC++AGLV+EG + FD+M ++ KI P+ EH  C+ D+  R G++ +A + +  +
Sbjct: 603 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNM 662

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
                   IW ++L +CR+H  +EL  + A+K++ M   +S    +VLLSN+YAE G+W+
Sbjct: 663 PNLAGS-TIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAA--YVLLSNMYAESGDWQ 719

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              KVRK M ER ++KE G SWI+V      F + D+ HP   +IY  LE L+  +++ G
Sbjct: 720 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 779


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/609 (33%), Positives = 330/609 (54%), Gaps = 44/609 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLG 240
           V D M  RN  AWN  +   V + ++ EA+  +  M+R G +     ++  V  A ++LG
Sbjct: 97  VLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALG 156

Query: 241 ---------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
                    +   ADVV G++          +FV  + + M+A+ GC   AR +F++ LE
Sbjct: 157 VVEQGRMVRENVEADVVRGVVAP-------SVFVQCALVDMFAKCGCLGEARSVFESMLE 209

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   W  MIGG V     ++A+ LF + +  +  + D V   + + A  + +EL  G  
Sbjct: 210 RDLAAWTAMIGGAVHAGDWLDAMSLFSR-MRSEGFLADSVIIATVIPACGRAKELRTGMV 268

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           LH   ++  V     V NA+++                    +DVVSW+T+I+ + QNG 
Sbjct: 269 LHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGK 328

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
           D   + L  EM   G   +S T+ ++L + S ++    GK+ H + LR+G    + + S 
Sbjct: 329 DHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSA 388

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            ID Y++ G I+ A  + E      RD   WN+M+AGY  NG  + A  AFR + +    
Sbjct: 389 FIDFYSRQGSIREAEIVLELMPK--RDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFR 446

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ VT+ SVLP CN    +  GK+LH + +R+ +     V  +LIDMY K   +     +
Sbjct: 447 PDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEI 506

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  + ++++ TY T+I  +G+HG  + A+ LF  MK  GI PD +TFVA+LS+CS+AGL+
Sbjct: 507 FQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLI 566

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           ++GL  +D+M Q+Y I P  EHY CV D+  R GK+ +A++FV  L +E  + ++ G LL
Sbjct: 567 EKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEI-DVLGCLL 625

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+CR+H   ++AE+VAK++ E +  +  PGYH+LLSNIYA  G W +V ++R  +  R L
Sbjct: 626 GACRVHNRMDIAELVAKRIFEQNPSD--PGYHILLSNIYANAGMWSHVTRIRTMIENRSL 683

Query: 751 RKEVGCSWI 759
           + + G S I
Sbjct: 684 KNKTGNSLI 692



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 205/415 (49%), Gaps = 27/415 (6%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           +G  +     +A+  +  YA LG    A  + D    RN+  WN  I G V +    EA+
Sbjct: 67  VGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEAL 126

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG----QQLHAYIIKNFVALPVI---- 366
           E +  ++    +  D  T+   + A + L  ++ G    + + A +++  VA  V     
Sbjct: 127 ETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCA 186

Query: 367 ----------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                           V  +++ERD+ +W  MI   V  G   + + L   M+ +GF+ D
Sbjct: 187 LVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLAD 246

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFE 469
           SV +  ++ A    +    G   H   +R G+  +  + + L+DMY K G +  A ++F 
Sbjct: 247 SVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFW 306

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
               G +D  +W+ +IAGY+QNG    +   F +M+   + PN  T+AS+LP+ + M   
Sbjct: 307 S--IGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLF 364

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             GK++HGFS+R   DQ+ F+G++ ID YS+ G I  A  V   +P+++ V + +M+ GY
Sbjct: 365 RHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGY 424

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
             +G ++ AL  FR+++  G  PD +T V+VL  C++   + +G ++   + + Y
Sbjct: 425 AVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHY 479



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 140/601 (23%), Positives = 254/601 (42%), Gaps = 119/601 (19%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           +++ + GR   A  + D +    +  WN  I G V +    EA+  Y  M +     + D
Sbjct: 86  ARLGEAGR---ALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAA-D 141

Query: 107 NYTYSSVLKACAETRNLRIGKAVH----CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
            +TY  V+KACA    +  G+ V        +R    PS FV  +L++M++ C    +A 
Sbjct: 142 GFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEAR 201

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                              VF++M  R++ AW  ++   V    +++A+  F  M   G 
Sbjct: 202 ------------------SVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGF 243

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
              ++    V PA     + ++  V++G  V+ G    +D  V+++ + MY + GC   A
Sbjct: 244 LADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVG--DDTCVSNALVDMYCKCGCLGMA 301

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            ++F +   ++   W+T+I GY QN     ++ LF +++    +  +  T  S L ++S+
Sbjct: 302 DRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAG-LKPNSNTMASILPSLSE 360

Query: 343 LQELDLGQQLHAYIIKN-----------FVAL---------PVIVLNAVIERDVVSWNTM 382
           ++    G+++H + ++N           F+             IVL  + +RD+V WN+M
Sbjct: 361 MKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSM 420

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++ +  NG  D  L     +QK GF  D VTV ++L   ++      GK+ HAY++RH  
Sbjct: 421 VAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRH-- 478

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE------- 495
                  Y+  + + S                       NA+I  Y +   LE       
Sbjct: 479 -------YMSSVCSVS-----------------------NALIDMYCKCCCLEKGKEIFQ 508

Query: 496 ------------------------EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
                                   EA + F  M    + P+ VT  ++L +C+  G IE 
Sbjct: 509 LVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIE- 567

Query: 532 GKQLHGFSIRYLLDQNVFVG----TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            K LH + I  L D N+  G    + ++D+YS+SG ++ A    + + ++  +     +L
Sbjct: 568 -KGLHFYDI-MLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLL 625

Query: 588 G 588
           G
Sbjct: 626 G 626



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 202/438 (46%), Gaps = 40/438 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A ++F SI     V W+T+I G+  N   + ++ L+++M  +      ++ T
Sbjct: 293 CKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKP--NSNT 350

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +S+L + +E +  R GK +H   +R   + S+F+ ++ ++ YS   S  +AE+      
Sbjct: 351 MASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEI------ 404

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       V + M +R++V WN++V+ Y        A+  FR + ++G RP  ++ 
Sbjct: 405 ------------VLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTV 452

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDN 288
           V+V P  +          ++  +V+    Y++ +   S+A+  MY +  C +  ++IF  
Sbjct: 453 VSVLPVCNHHSRLIQGKELHAYVVR---HYMSSVCSVSNALIDMYCKCCCLEKGKEIFQL 509

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +R+T  +NT+I  + ++ H  EAI LF  +++ D I  D VTF++ LS+ S    ++ 
Sbjct: 510 VTDRDTATYNTLISSFGKHGHEDEAIMLF-DLMKRDGIAPDKVTFVALLSSCSHAGLIEK 568

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G   +  +++++   P              ++ ++  + ++G  D+    V  +Q +   
Sbjct: 569 GLHFYDIMLQDYNISP----------GKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEA-- 616

Query: 409 IDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
              + V   L  A  + N+ D+ +     +        G    L ++YA +G+     +I
Sbjct: 617 --EIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRI 674

Query: 468 FEKNDSGDRDQATWNAMI 485
               ++      T N++I
Sbjct: 675 RTMIENRSLKNKTGNSLI 692


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 254/800 (31%), Positives = 398/800 (49%), Gaps = 104/800 (13%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           P LP    +SP    L T  + S L+  C  G    A  + + +T    V WN +I   +
Sbjct: 40  PALPSEPFISPR--SLGTGVVASYLA--C--GATDYALLVLERVTPSPAVWWNLLIREHI 93

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                  AI +  +M ++   T  D++T   VLKAC E  + R G A H   I C    S
Sbjct: 94  KQGRLDSAINVSCRMLRAG--TRLDHFTLPHVLKACGELPSYRCGSAFH-GLICCNGFES 150

Query: 142 R-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWNTI 197
             F+ N+L+ MYS C S  +A M+                  FD + +R   +V++WN+I
Sbjct: 151 NVFICNALVAMYSRCGSLEEASMI------------------FDEITQRGIDDVISWNSI 192

Query: 198 VSWYVKTERYVEAVRQF-RMMLRMGIRPST-----ISFVNVFPALSSLGDYKSADVVYGL 251
           VS +VK+     A+  F +M L +  +P+      IS VN+ PA  SL        V+G 
Sbjct: 193 VSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGN 252

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            ++ G+    D+FV ++ I  YA+ G  + A K+F+    ++   WN M+ GY Q+ +  
Sbjct: 253 AIRNGTFL--DVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFK 310

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            A ELF  + + +                                               
Sbjct: 311 AAFELFKNMRKEN----------------------------------------------- 323

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I  D+V+W  +I+ + Q G   E L +  +M   G + + VT+ ++LSA ++L     G 
Sbjct: 324 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 383

Query: 432 QTHAYLLRHGI-----HFEGME------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           + HAY L++ +      F G +      + LIDMY+K    K AR IF+     +R+  T
Sbjct: 384 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 443

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           W  MI G+ Q G   +A   F +M+   + V PN  TI+ +L AC  +  I +GKQ+H +
Sbjct: 444 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 503

Query: 539 SIRY-LLDQNV-FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            +R+   D +  FV   LI+MYSK G ++ A +VF  + +K+++++T+M+ GYG HG   
Sbjct: 504 VLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGS 563

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL +F  M+  G  PD ITF+ VL ACS+ G+VD+GL  FD M  +Y + P  EHY   
Sbjct: 564 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 623

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+L R G++ +A++ VK++  E   + +W +LL +CR+H + ELAE    KL+EM+  N
Sbjct: 624 IDLLARFGRLDKAWKTVKDMPMEPTAV-VWVALLSACRVHSNVELAEHALNKLVEMNAEN 682

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
              G + L+SNIYA  G W++V ++R  M++ G++K  GCSW+        F   D+ HP
Sbjct: 683 D--GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 740

Query: 777 QSHKIYEMLERLAMEMRNAG 796
            S +IY +LE L   ++  G
Sbjct: 741 LSPQIYALLESLIDRIKAMG 760


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 233/708 (32%), Positives = 376/708 (53%), Gaps = 49/708 (6%)

Query: 112 SVLKACA-ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S+L+ C   T++LR  K VH   +         +  SL+N+Y TC     A  V      
Sbjct: 8   SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV------ 61

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISF 229
             +  +D+         R +V  WN+++S Y K   + + +  F+ +L   I  P + +F
Sbjct: 62  --FENFDI---------RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTF 110

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            NV  A  +LG      +++ L+VK G  YV D+ VASS + MYA+   F+ + ++FD  
Sbjct: 111 PNVIKAYGALGREFLGRMIHTLVVKSG--YVCDVVVASSLVGMYAKFNLFENSLQVFDEM 168

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WNT+I  + Q+    +A+ELF + +E      + V+   A+SA S+L  L+ G
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGR-MESSGFEPNSVSLTVAISACSRLLWLERG 227

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           +++H   +K    L   V +A+++                    + +V+WN+MI  +V  
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G     + ++  M  +G      T+T++L A S  RN   GK  H Y++R  ++ +  + 
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             LID+Y K G    A  +F K     +D A +WN MI+ Y   G   +A   + QM+  
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQ---KDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V P+VVT  SVLPAC+ +  +E GKQ+H       L+ +  + ++L+DMYSK G    A
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  IP+K+ V++T MI  YG HG    AL  F  M+  G++PD +T +AVLSAC +A
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA 524

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GL+DEGL+ F  M+ +Y I+P  EHY C+ D+LGR G+++EAYE +++  E  +  E+  
Sbjct: 525 GLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +L  +C LH    L + +A+ L+E +  +    Y VL  N+YA   +W+   +VR +M+E
Sbjct: 585 TLFSACCLHLEHSLGDRIARLLVE-NYPDDASTYMVLF-NLYASGESWDAARRVRLKMKE 642

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
            GLRK+ GCSWI++   V  F ++D+ H ++  +YE L  L+  M + 
Sbjct: 643 MGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHMESG 690



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 139/542 (25%), Positives = 256/542 (47%), Gaps = 47/542 (8%)

Query: 58  ARQLFDSI-TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           AR +F++   R    IWN+++ G+  N++ ++ + ++ ++   S     D++T+ +V+KA
Sbjct: 58  ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP-DSFTFPNVIKA 116

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                   +G+ +H   ++        V +SL+ MY+                   ++ +
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK------------------FNLF 158

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +   +VFD M  R+V +WNT++S + ++    +A+  F  M   G  P+++S      A 
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L   +    ++   VK G E   D +V S+ + MY +  C + AR++F     ++   
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFEL--DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+MI GYV        +E+  +++ ++       T  S L A S+ + L  G+ +H Y+
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335

Query: 357 IKNFVALPVIVLNAVI-------------------ERDVV-SWNTMISAFVQNGLDDEGL 396
           I++ V   + V  ++I                   ++DV  SWN MIS+++  G   + +
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
            +  +M   G   D VT T++L A S L   + GKQ H  +    +   E + S L+DMY
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K G  K A +IF  N    +D  +W  MI+ Y  +G   EA   F +M +  + P+ VT
Sbjct: 456 SKCGNEKEAFRIF--NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513

Query: 516 IASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           + +VL AC   G I+ G K       +Y ++  +   + +ID+  ++G +  A  +  + 
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573

Query: 575 PE 576
           PE
Sbjct: 574 PE 575



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 23/310 (7%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +AR++F  + R + V WN++I G+V        + + ++M       S    T +S+L A
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS--QTTLTSILMA 318

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+ +RNL  GK +H + IR   N   +V  SL+++Y  C                   + 
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC------------------GEA 360

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +L   VF   ++    +WN ++S Y+    + +AV  +  M+ +G++P  ++F +V PA 
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L   +    ++  L    S    D  + S+ + MY++ G    A +IF++  +++   
Sbjct: 421 SQLAALEKGKQIH--LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  MI  Y  +  P EA+  F ++ +   +  D VT L+ LSA      +D G +  + +
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537

Query: 357 IKNFVALPVI 366
              +   P+I
Sbjct: 538 RSKYGIEPII 547



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  +LA  +F    +     WN +I  ++     ++A+ +Y QM   S     D  T++S
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM--VSVGVKPDVVTFTS 415

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC++   L  GK +H             + ++LL+MYS C +  +A           
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA----------- 464

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F+++ +++VV+W  ++S Y    +  EA+ QF  M + G++P  ++ + V
Sbjct: 465 -------FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517

Query: 233 FPALSSLG 240
             A    G
Sbjct: 518 LSACGHAG 525


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 214/640 (33%), Positives = 343/640 (53%), Gaps = 38/640 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF--PALSSL 239
           +F +   RN   W  ++  +    R  +A+  FR ML  G+ P  ++   V   P  +  
Sbjct: 96  LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-- 153

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   ++   +K G +    +FV ++ +  Y + G    AR++F    +++   +N 
Sbjct: 154 -----VPSLHPFAIKFGLD--THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+ G  +     +A++LF   +    I     TF S L+  + +  L LG Q+HA ++++
Sbjct: 207 MMMGCSKEGLHTQALQLFA-AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRS 265

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
              L V V N+++                    ERD VS+N +I+A+  N      L L 
Sbjct: 266 TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKS 458
            EMQK GF    +    +LS A +L +  +GKQ HA L+  G+  E +  + LIDMY+K 
Sbjct: 326 REMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G++  A+  F  ++  ++   +W A+I GY QNG  EEA   F  M    + P+  T +S
Sbjct: 386 GMLDAAKSNF--SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           ++ A + +  I LG+QLH + IR     +VF G+ L+DMY+K G ++ A   F ++PE+N
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           S+++  +I  Y  +G ++ A+ +F  M  CG  PD++TF++VL+ACS+ GL DE ++ F 
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 563

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM+ +Y I P  EHY CV D LGRVG   +  + + E+  + + + IW S+L SCR+HG+
Sbjct: 564 LMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGN 622

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ELA V A KL  M+  ++ P  +V+LSNIYA  G WE+   V+K MR+RG+RKE G SW
Sbjct: 623 QELARVAADKLFGMEPTDATP--YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSW 680

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +++   +  FAS D   P   +I + L+RL  EM   G K
Sbjct: 681 VEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYK 720



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 24/447 (5%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y+  G    A+ +F +   RN   W  M+  +       +A+ LF  +L  + ++ D VT
Sbjct: 84  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG-EGVIPDRVT 142

Query: 333 FLSALS----AVSQLQ--ELDLGQQLH---------AYIIKNFVALPVIVLNAVIERDVV 377
             + L+     V  L    +  G   H         AY     +A    V   + ++D V
Sbjct: 143 VTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAV 202

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           ++N M+    + GL  + L L   M++ G      T +++L+ A+ + +  +G Q HA +
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 438 LRH-GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           LR   +    + + L+D Y+K   +   R++F+  +  +RD  ++N +IA Y  N     
Sbjct: 263 LRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD--EMPERDNVSYNVIIAAYAWNQCAAT 320

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
               FR+M +      V+  A++L     + ++ +GKQ+H   +   L     +G +LID
Sbjct: 321 VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MYSK G+++ A + F+   EK+++++T +I GY Q+G  E AL LF  M+  G+ PD  T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440

Query: 617 FVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           F +++ A S   ++  G Q+   L++  YK   S      + DM  + G + EA     E
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYK--SSVFSGSVLVDMYAKCGCLDEALRTFDE 498

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELA 702
           + E  ++   W +++ +   +G ++ A
Sbjct: 499 MPERNSI--SWNAVISAYAHYGEAKNA 523



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 185/399 (46%), Gaps = 45/399 (11%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTS 104
           L   C+ G    AR++F  +     V +N +++G     L  +A+ L++ M+++  P T 
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPAT- 235

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
             ++T+SS+L   A   +L +G  VH   +R  S  + FV NSLL+ YS C         
Sbjct: 236 --HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC--------- 284

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                       D + ++FD M  R+ V++N I++ Y   +     +R FR M ++G   
Sbjct: 285 ---------DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             + +  +     SL D      ++  LV LG    ++  + ++ I MY++ G  D A+ 
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG--LASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F N  E++   W  +I GYVQN    EA++LF   +    +  D  TF S + A S L 
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD-MRRAGLRPDRATFSSIIKASSSLA 452

Query: 345 ELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMIS 384
            + LG+QLH+Y+I++     V                       + + ER+ +SWN +IS
Sbjct: 453 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
           A+   G     + +   M   GF  DSVT  ++L+A S+
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 20/183 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+  F + +  + + W  +I G+V N    EA+ L+S M+++      D  T+SS++KA 
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG--LRPDRATFSSIIKAS 448

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    + +G+ +H + IR     S F  + L++MY+ C   LD  +              
Sbjct: 449 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC-GCLDEAL-------------- 493

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              + FD M  RN ++WN ++S Y        A++ F  ML  G  P +++F++V  A S
Sbjct: 494 ---RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550

Query: 238 SLG 240
             G
Sbjct: 551 HNG 553



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 22/200 (11%)

Query: 536 HGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           H    R + DQ    N+F    ++  YS SG +  A ++F   P +N+ T+T M+  +  
Sbjct: 58  HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 117

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLS--ACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            G +  ALSLFR+M G G+ PD +T   VL+   C+   L    ++ F L    +     
Sbjct: 118 AGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIK-FGLDTHVFVCNTL 176

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG-HSELAEVVAKK 708
            + YC       + G +  A     E+ ++  V   + +++  C   G H++     A +
Sbjct: 177 LDAYC-------KHGLLAAARRVFLEMHDKDAV--TYNAMMMGCSKEGLHTQ-----ALQ 222

Query: 709 LLEMDTRNSMPGYHVLLSNI 728
           L     R  +P  H   S+I
Sbjct: 223 LFAAMRRAGIPATHFTFSSI 242


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 231/767 (30%), Positives = 393/767 (51%), Gaps = 57/767 (7%)

Query: 55  PHLARQLFDSITRPTTVIW-NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           P  AR   D I R    +  N ++  +    +  E +  +S  ++       D+ T S V
Sbjct: 48  PPGARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLV--DSATLSCV 105

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           LKAC    +  +G+ +HC  ++C  +        SL++MY  C S  +            
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG----------- 154

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF+ M ++NVV W ++++     + + E +  F  M   GI P+  +F +V
Sbjct: 155 -------IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASV 207

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A++S G       V+   VK G    + +FV +S + MYA+ G  + A+ +F+    R
Sbjct: 208 LSAVASQGALDLGQRVHAQSVKFGCR--SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT++ G   N   +EA++LF +            T+ + +   + L++L L +QL
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHES-RATMGKMTQSTYATVIKLCANLKQLALARQL 324

Query: 353 HAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGL 391
           H+ ++K+   L   V+ A+ +                     R+VVSW  +IS  +QNG 
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
               ++L   M++   M +  T +A+L A+ ++    +  Q HA +++    H   + + 
Sbjct: 385 IPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTA 440

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+  Y+K G  + A  IF+  +   +D   W+AM++ + Q G  E A   F +M    + 
Sbjct: 441 LLASYSKFGSTEDALSIFKMIE--QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 511 PNVVTIASVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN  TI+SV+ AC  P   ++ G+Q H  SI+Y     + V ++L+ MYS+ G I+ A  
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF +  +++ V++ +MI GY QHG S +A+  FR M+  GI+ D +TF+AV+  C++ GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V EG Q FD M +++KI P+ EHY C+ D+  R GK+ E    ++++      + +W +L
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAM-VWRTL 677

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR+H + EL +  A KLL ++  +S    +VLLSNIYA  G W+  D+VRK M  R 
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDS--STYVLLSNIYAAAGKWKERDEVRKLMDYRK 735

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++KE GCSWI +   V+ F + D+ HP S +IY+ L+ +   ++  G
Sbjct: 736 VKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDG 782


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 233/724 (32%), Positives = 371/724 (51%), Gaps = 53/724 (7%)

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           C+ +    VLK   + +   +G  VH   +        FV N+L+ MY            
Sbjct: 8   CNEFALPVVLKCVPDAQ---LGAQVHAMAMATGFGSDVFVANALVAMYG----------- 53

Query: 165 GLKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           G  ++       D   +VFD     RN V+WN ++S YVK ++  +A++ F  M+  GI+
Sbjct: 54  GFGFM-------DDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 106

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+   F  V  A +   +  +   V+ ++V++G  Y  D+F A++ + MY ++G  D A 
Sbjct: 107 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG--YEKDVFTANALVDMYVKMGRVDIAS 164

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            IF+   + +   WN +I G V N H   AIEL +Q ++   +V +     S L A +  
Sbjct: 165 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ-MKSSGLVPNVFMLSSILKACAGA 223

Query: 344 QELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMI 383
              DLG+Q+H ++IK                    +F+   + V + +  RD++ WN +I
Sbjct: 224 GAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALI 283

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S     G  DE   + Y ++K+G  ++  T+ A+L + ++L      +Q HA   + G  
Sbjct: 284 SGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI 343

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           F+  + + LID Y K   +  A ++FE+  SGD    T  +MI   +Q    E A   F 
Sbjct: 344 FDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT--SMITALSQCDHGEGAIKLFM 401

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +ML   + P+   ++S+L AC  +   E GKQ+H   I+     + F G +L+  Y+K G
Sbjct: 402 EMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCG 461

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I  A   F+ +PE+  V+++ MI G  QHG  +RAL LF  M   GI P+ IT  +VL 
Sbjct: 462 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 521

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           AC++AGLVDE  + F+ M++ + I  + EHY C+ D+LGR GK+ +A E V  +  + N 
Sbjct: 522 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 581

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             +WG+LLG+ R+H   EL ++ A+KL  ++   S  G HVLL+N YA  G W  V KVR
Sbjct: 582 -SVWGALLGASRVHKDPELGKLAAEKLFILEPEKS--GTHVLLANTYASSGMWNEVAKVR 638

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           K M++  ++KE   SW++V   V+ F   D+ HP + +IY  L+ L   M  AG   I N
Sbjct: 639 KLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG--YIPN 696

Query: 803 SNVD 806
            +VD
Sbjct: 697 VDVD 700



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 200/461 (43%), Gaps = 56/461 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +A  +F+ +     V WN +I G V N   + AI L  QMK S    +   +  SS
Sbjct: 158 GRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNV--FMLSS 215

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKACA      +G+ +H   I+  ++   ++   L++MY+     LD  M         
Sbjct: 216 ILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKN-HFLDDAM--------- 265

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVFD M  R+++ WN ++S      R+ EA   F  + + G+  +  +   V
Sbjct: 266 --------KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAV 317

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +SL    +   V+ L  K+G  ++ D  V +  I  Y +  C   A ++F+ C   
Sbjct: 318 LKSTASLEAASATRQVHALAEKIG--FIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSG 375

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +     +MI    Q +H   AI+LF+++L    +  D     S L+A + L   + G+Q+
Sbjct: 376 DIIAVTSMITALSQCDHGEGAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGKQV 434

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA++IK          NA++                    ER VVSW+ MI    Q+G  
Sbjct: 435 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 494

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-HFEGMESY 450
              L L   M  +G   + +T+T++L A ++    D  K+    +    GI   E   S 
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 554

Query: 451 LIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIA 486
           +ID+  ++G +  A ++     F+ N S       W A++ 
Sbjct: 555 MIDLLGRAGKLDDAMELVNSMPFQANAS------VWGALLG 589


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 218/646 (33%), Positives = 339/646 (52%), Gaps = 94/646 (14%)

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L S      A   +G ++K  S    + F+ ++ +  YA LG    AR++FD    RNT 
Sbjct: 27  LRSAPSLPGARAAHGCVLK--SPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTF 84

Query: 296 VWNTMIGGYVQNNHPVEAIEL--------------------------------FVQVLEL 323
            +N ++  Y +   P EA  L                                F+  +  
Sbjct: 85  SYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHA 144

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------------------ 365
           D+ V +  +F SALSA +  ++L  G+Q+H  + ++  A  V                  
Sbjct: 145 DDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVD 204

Query: 366 --IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V +A+ ER+VVSWN++I+ + QNG   E L+L  EM   GF  D VT+++++SA + 
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSG------- 474
           L  +  G+Q HA++++     + M   + L+DMYAK G    AR IF+   S        
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324

Query: 475 ----------------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
                                 +++   WN +IA Y QNG  EEA   F Q+   ++ P 
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384

Query: 513 VVTIASVLPACNPMGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             T  +VL AC  +  ++LG+Q H      GF   +  + +VFVG SL+DMY K+G I+ 
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
            A VF ++  +++V++  MI+GY Q+G ++ AL LF  M      PD++T + VLSAC +
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GLVDEG + F  M +++ I PS +HY C+ D+LGR G + EA E +K++  E + + +W
Sbjct: 505 SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSV-LW 563

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            SLLG+CRLH + EL E  A +L E+D  NS P  +VLLSN+YAE G W +V +VR+ M+
Sbjct: 564 ASLLGACRLHKNVELGERTAGRLFELDPENSGP--YVLLSNMYAEMGKWADVFRVRRSMK 621

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           +RG+ K+ GCSWI++G  +N F ++D  HP  ++I+  L  + MEM
Sbjct: 622 DRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 144/567 (25%), Positives = 229/567 (40%), Gaps = 123/567 (21%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           IP   T +  + LS   + GRP  AR LF++I  P    +N ++     +   +    L 
Sbjct: 78  IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALR 137

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
                 +     + Y+++S L ACA  ++LR G+ VH    R        +  +L++MY+
Sbjct: 138 FLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYA 197

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C   +DA                   +VFD M  RNVV+WN++++ Y +     EA+  
Sbjct: 198 KCERPVDAR------------------RVFDAMPERNVVSWNSLITCYEQNGPVGEALVL 239

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M+  G  P  ++  +V  A + L   +    V+  +VK      +D+ + ++ + MY
Sbjct: 240 FVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKR-DRLRDDMVLNNALVDMY 298

Query: 274 AELGCFDFARKIFDN-------------------------------CLERNTEVWNTMIG 302
           A+ G    AR IFD+                                +E+N   WN +I 
Sbjct: 299 AKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIA 358

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
            Y QN    EAI LFVQ L+ D I     T+ + L+A   +  L LGQQ H +++K    
Sbjct: 359 AYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFR 417

Query: 360 ---------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                    FV   ++              V   +  RD VSWN MI  + QNG   + L
Sbjct: 418 FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDAL 477

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-----HFEGMESY 450
            L   M       DSVT+  +LSA  +    D G++   ++   HGI     H+  M   
Sbjct: 478 HLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCM--- 534

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            +D+  ++G +K A ++        +D  T                              
Sbjct: 535 -VDLLGRAGHLKEAEELI-------KDMPT-----------------------------E 557

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHG 537
           P+ V  AS+L AC    N+ELG++  G
Sbjct: 558 PDSVLWASLLGACRLHKNVELGERTAG 584



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 206/455 (45%), Gaps = 39/455 (8%)

Query: 26  QIHSL---SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+H L   SP    +   T    +   C+  RP  AR++FD++     V WN++I  +  
Sbjct: 172 QVHGLVARSPHADDVHIGTALVDMYAKCE--RPVDARRVFDAMPERNVVSWNSLITCYEQ 229

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI-RCFSNPS 141
           N    EA++L+ +M  +  +   D  T SSV+ ACA     R G+ VH H + R      
Sbjct: 230 NGPVGEALVLFVEMMATGFFP--DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDD 287

Query: 142 RFVYNSLLNMYSTCLSSLDAE----------MVGLKYVEVDYSKYDLVCK---VFDTMRR 188
             + N+L++MY+ C  + +A           +V    +   Y+K   V     VF  M  
Sbjct: 288 MVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVE 347

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           +NV+AWN +++ Y +     EA+R F  + R  I P+  ++ NV  A  ++   +     
Sbjct: 348 KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQA 407

Query: 249 YGLLVKLGSEY----VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           +  ++K G  +     +D+FV +S + MY + G  D   K+F+    R+   WN MI GY
Sbjct: 408 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGY 467

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN    +A+ LF ++L  +E   D VT +  LSA      +D G++   ++ ++    P
Sbjct: 468 AQNGRAKDALHLFERMLCSNENP-DSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITP 526

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    RD   +  M+    + G   E   L+ +M  +    DSV   +LL A    
Sbjct: 527 --------SRD--HYTCMVDLLGRAGHLKEAEELIKDMPTEP---DSVLWASLLGACRLH 573

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           +N ++G++T   L        G    L +MYA+ G
Sbjct: 574 KNVELGERTAGRLFELDPENSGPYVLLSNMYAEMG 608


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 211/623 (33%), Positives = 343/623 (55%), Gaps = 33/623 (5%)

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
           +V  + K   Y+     FR ++R G RP   +   V  A   L + +   +++ ++ K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
            +   D FV ++ + MY +    + AR +FD   ER+   W  MIGGY +     E++ L
Sbjct: 61  LDL--DHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---- 372
           F ++ E + +V D V  ++ + A ++L  +   + +  YI +    L VI+  A+I    
Sbjct: 119 FEKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYA 177

Query: 373 ----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                           E++V+SW+ MI+A+  +G   + L L   M   G + D +T+ +
Sbjct: 178 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLAS 237

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           LL A S+L+N  +G+  H  + + G+   HF  + + L+DMY K   I+ AR +F+K   
Sbjct: 238 LLYACSDLKNLQMGRLIHHIVYKFGLDLDHF--VCAALVDMYGKCREIEDARFLFDKMP- 294

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            +RD  TW  MI GY + G   E+ V F +M E  V P+ V + +V+ AC  +G +   +
Sbjct: 295 -ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 353

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
            +  +  R     +V +GT++IDM++K G +  A  +F ++ EKN ++++ MI  YG HG
Sbjct: 354 TIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 413

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
              +AL LF  M   GI P+ IT V++L ACS+AGLV+EGL+ F LM ++Y ++   +HY
Sbjct: 414 QGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHY 473

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            CV D+LGR G++ EA + ++ +  E +   +WG+ LG+CR H    LAE  A  LLE+ 
Sbjct: 474 TCVVDLLGRAGRLDEALKLIESMTVEKDE-GLWGAFLGACRTHKDVVLAEKAATSLLELQ 532

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
            +N  PG+++LLSNIYA  G WE+V K R  M +R L+K  G +WI+V    ++F+  D 
Sbjct: 533 PQN--PGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDT 590

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP+S +IYEML+ L  ++   G
Sbjct: 591 THPRSKEIYEMLKSLGNKLELVG 613



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 244/487 (50%), Gaps = 51/487 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMV 164
           DNYT   V++AC + +NL++G+ +H H +  F  +   FV  +L++MY  C    DA   
Sbjct: 29  DNYTLPFVIRACRDLKNLQMGRLIH-HIVYKFGLDLDHFVCAALVDMYVKCREIEDARF- 86

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                            +FD M+ R++V W  ++  Y +  +  E++  F  M   G+ P
Sbjct: 87  -----------------LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 129

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             ++ V V  A + LG    A ++   + +   ++  D+ + ++ I MYA+ GC + AR+
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQR--KKFQLDVILGTAMIDMYAKCGCVESARE 187

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           IFD   E+N   W+ MI  Y  +    +A++LF  +L    ++ D +T  S L A S L+
Sbjct: 188 IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS-SGMLPDKITLASLLYACSDLK 246

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            L +G+ +H  + K  + L   V  A++                    ERD+V+W  MI 
Sbjct: 247 NLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIG 306

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + + G  +E L+L  +M+++G + D V +  ++ A + L      +    Y+ R     
Sbjct: 307 GYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 366

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + + +IDM+AK G +++AR+IF++ +  +++  +W+AMIA Y  +G   +A   F  
Sbjct: 367 DVILGTAMIDMHAKCGCVESAREIFDRME--EKNVISWSAMIAAYGYHGQGRKALDLFPM 424

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSK 560
           ML   + PN +T+ S+L AC+  G +E G  L  FS+    Y +  +V   T ++D+  +
Sbjct: 425 MLRSGILPNKITLVSLLYACSHAGLVEEG--LRFFSLMWEDYSVRADVKHYTCVVDLLGR 482

Query: 561 SGVINYA 567
           +G ++ A
Sbjct: 483 AGRLDEA 489



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 210/463 (45%), Gaps = 68/463 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD +     V W  +I G+       E+++L+ +M++       D     +V+ AC
Sbjct: 84  ARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP--DKVAMVTVVFAC 141

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+   +   + +  +  R        +  ++++MY+ C     A                
Sbjct: 142 AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAR--------------- 186

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++FD M  +NV++W+ +++ Y    +  +A+  FRMML  G+ P  I+  ++  A S
Sbjct: 187 ---EIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACS 243

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L + +   +++ ++ K G +   D FV ++ + MY +    + AR +FD   ER+   W
Sbjct: 244 DLKNLQMGRLIHHIVYKFGLDL--DHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTW 301

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MIGGY +  +  E++ LF ++ E + +V D V  ++ + A ++L  +   + +  YI 
Sbjct: 302 TVMIGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +    L VI+  A+I                    E++V+SW+ MI+A+  +G   + L 
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM--ESY----- 450
           L   M + G + + +T+ +LL A S           HA L+  G+ F  +  E Y     
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACS-----------HAGLVEEGLRFFSLMWEDYSVRAD 469

Query: 451 ------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                 ++D+  ++G +  A ++ E   + ++D+  W A +  
Sbjct: 470 VKHYTCVVDLLGRAGRLDEALKLIESM-TVEKDEGLWGAFLGA 511


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 233/743 (31%), Positives = 392/743 (52%), Gaps = 62/743 (8%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYN 146
           A+   S +  +SP    D+      +K+ A  R+ R  +A+H   +R      PS  V N
Sbjct: 41  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 100

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR--RRNVVAWNTIVSWYVKT 204
           +LL  Y+ C                   +     +VF ++     + V++N+++S     
Sbjct: 101 ALLTAYARC------------------GRLAAALEVFGSISDSAHDAVSFNSLISALCLF 142

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA----DVVYGLLVKLGSEYV 260
            R+  A+   R ML  G   ++ + V+V  A+S L    +A       +   +K G  + 
Sbjct: 143 RRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG 202

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFV 318
           +  F  ++ + MYA LG    A+++F        +V  WNTM+   VQ+    EA++   
Sbjct: 203 HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLY 262

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAV 371
            ++ L  +  D VTF SAL A S+L+ LD+G+++HAY+IK+       FVA  ++ + A 
Sbjct: 263 DMVALG-VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT 321

Query: 372 IER--------DVVS--------WNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTV 414
            E+        D+V         WN MI  + Q G+D+E L L   M+ + GF+    T+
Sbjct: 322 HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTM 381

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDS 473
            ++L A +        +  H Y+++ G+     +++ L+DMYA+ G    AR+IF   D 
Sbjct: 382 ASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL 441

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQML---EHNVTPNVVTIASVLPACNPMGNIE 530
              D  +WN +I G    G + +AF   R+M    E  V PN +T+ ++LP C  +    
Sbjct: 442 --PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 499

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK++HG+++R+ LD +V VG++L+DMY+K G +  +  VF ++P +N++T+  +I+ YG
Sbjct: 500 RGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYG 559

Query: 591 QHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            HG+   A  LF  M   G   P+ +TF+A L+ACS++G+VD GLQ+F  M++++ ++P+
Sbjct: 560 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPT 619

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +   CV D+LGR G++ EAY  V  +      +  W ++LG+CRLH +  L E+  ++L
Sbjct: 620 PDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERL 679

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE++   +   ++VLL NIY+  G W    +VR  MR RG+ KE GCSWI+V G ++RF 
Sbjct: 680 LELEPEEA--SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFM 737

Query: 770 SKDQEHPQSHKIYEMLERLAMEM 792
           + +  HP S +++  +E L  EM
Sbjct: 738 AGESAHPASEEVHAHMEALWGEM 760



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 149/300 (49%), Gaps = 26/300 (8%)

Query: 58  ARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           ARQ+FD +  +     +WN +I G+    +  EA+ L+++M+  + +  C+  T +SVL 
Sbjct: 328 ARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET-TMASVLP 386

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA +      +AVH + ++     +RFV N+L++MY+                     K
Sbjct: 387 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR------------------LGK 428

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM---GIRPSTISFVNV 232
            D+  ++F  +   +VV+WNT+++  V      +A +  R M ++   G+ P+ I+ + +
Sbjct: 429 TDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTL 488

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + L        ++G  V+   +   D+ V S+ + MYA+ GC   +R +FD    R
Sbjct: 489 LPGCAILAAPARGKEIHGYAVRHALD--TDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 546

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           NT  WN +I  Y  +    EA  LF ++    E   ++VTF++AL+A S    +D G QL
Sbjct: 547 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 606



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 25/255 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G+  +AR++F  +  P  V WNT+I G V      +A  L  +M++        N  T  
Sbjct: 427 GKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLM 486

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++L  CA       GK +H + +R   +    V ++L++MY+ C                
Sbjct: 487 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC---------------- 530

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                 L   VFD + RRN + WN ++  Y       EA   F  M   G  RP+ ++F+
Sbjct: 531 --GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 588

Query: 231 NVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN- 288
               A S  G   +   + + +    G E   D+   +  + +    G  D A  +  + 
Sbjct: 589 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL--ACVVDILGRAGRLDEAYAMVTSM 646

Query: 289 -CLERNTEVWNTMIG 302
              E+    W+TM+G
Sbjct: 647 ETGEQQVSAWSTMLG 661


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 214/640 (33%), Positives = 343/640 (53%), Gaps = 38/640 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF--PALSSL 239
           +F +   RN   W  ++  +    R  +A+  FR ML  G+ P  ++   V   P  +  
Sbjct: 96  LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-- 153

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   ++   +K G +    +FV ++ +  Y + G    AR++F    +++   +N 
Sbjct: 154 -----VPSLHPFAIKFGLD--THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 206

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+ G  +     +A++LF   +    I     TF S L+  + +  L LG Q+HA ++++
Sbjct: 207 MMMGCSKEGLHTQALQLFA-AMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRS 265

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
              L V V N+++                    ERD VS+N +I+A+  N      L L 
Sbjct: 266 TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKS 458
            EMQK GF    +    +LS A +L +  +GKQ HA L+  G+  E +  + LIDMY+K 
Sbjct: 326 REMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKC 385

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G++  A+  F  ++  ++   +W A+I GY QNG  EEA   F  M    + P+  T +S
Sbjct: 386 GMLDAAKSNF--SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           ++ A + +  I LG+QLH + IR     +VF G+ L+DMY+K G ++ A   F ++PE+N
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           S+++  +I  Y  +G ++ A+ +F  M  CG  PD++TF++VL+ACS+ GL DE ++ F 
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFH 563

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM+ +Y I P  EHY CV D LGRVG   +  + + E+  + + + IW S+L SCR+HG+
Sbjct: 564 LMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGN 622

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ELA V A KL  M+  ++ P  +V+LSNIYA  G WE+   V+K MR+RG+RKE G SW
Sbjct: 623 QELARVAADKLFGMEPTDATP--YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSW 680

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +++   +  FAS D   P   +I + L+RL  EM   G K
Sbjct: 681 VEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYK 720



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 24/447 (5%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y+  G    A+ +F +   RN   W  M+  +       +A+ LF  +L  + ++ D VT
Sbjct: 84  YSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG-EGVIPDRVT 142

Query: 333 FLSALS----AVSQLQ--ELDLGQQLH---------AYIIKNFVALPVIVLNAVIERDVV 377
             + L+     V  L    +  G   H         AY     +A    V   + ++D V
Sbjct: 143 VTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAV 202

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           ++N M+    + GL  + L L   M++ G      T +++L+ A+ + +  +G Q HA +
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 438 LRH-GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           LR   +    + + L+D Y+K   +   R++F+  +  +RD  ++N +IA Y  N     
Sbjct: 263 LRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFD--EMPERDNVSYNVIIAAYAWNQCAAT 320

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
               FR+M +      V+  A++L     + ++ +GKQ+H   +   L     +G +LID
Sbjct: 321 VLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALID 380

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MYSK G+++ A + F+   EK+++++T +I GY Q+G  E AL LF  M+  G+ PD  T
Sbjct: 381 MYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRAT 440

Query: 617 FVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           F +++ A S   ++  G Q+   L++  YK   S      + DM  + G + EA     E
Sbjct: 441 FSSIIKASSSLAMIGLGRQLHSYLIRSGYK--SSVFSGSVLVDMYAKCGCLDEALRTFDE 498

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELA 702
           + E  ++   W +++ +   +G ++ A
Sbjct: 499 MPERNSI--SWNAVISAYAHYGEAKNA 523



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 185/399 (46%), Gaps = 45/399 (11%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTS 104
           L   C+ G    AR++F  +     V +N +++G     L  +A+ L++ M+++  P T 
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPAT- 235

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
             ++T+SS+L   A   +L +G  VH   +R  S  + FV NSLL+ YS C         
Sbjct: 236 --HFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKC--------- 284

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                       D + ++FD M  R+ V++N I++ Y   +     +R FR M ++G   
Sbjct: 285 ---------DCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             + +  +     SL D      ++  LV LG    ++  + ++ I MY++ G  D A+ 
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLG--LASEDLLGNALIDMYSKCGMLDAAKS 393

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F N  E++   W  +I GYVQN    EA++LF   +    +  D  TF S + A S L 
Sbjct: 394 NFSNRSEKSAISWTALITGYVQNGQHEEALQLFSD-MRRAGLRPDRATFSSIIKASSSLA 452

Query: 345 ELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMIS 384
            + LG+QLH+Y+I++     V                       + + ER+ +SWN +IS
Sbjct: 453 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 512

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
           A+   G     + +   M   GF  DSVT  ++L+A S+
Sbjct: 513 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 20/183 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+  F + +  + + W  +I G+V N    EA+ L+S M+++      D  T+SS++KA 
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRP--DRATFSSIIKAS 448

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    + +G+ +H + IR     S F  + L++MY+ C   LD  +              
Sbjct: 449 SSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC-GCLDEAL-------------- 493

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              + FD M  RN ++WN ++S Y        A++ F  ML  G  P +++F++V  A S
Sbjct: 494 ---RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550

Query: 238 SLG 240
             G
Sbjct: 551 HNG 553



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 22/200 (11%)

Query: 536 HGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           H    R + DQ    N+F    ++  YS SG +  A ++F   P +N+ T+T M+  +  
Sbjct: 58  HLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAA 117

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLS--ACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            G +  ALSLFR+M G G+ PD +T   VL+   C+   L    ++ F L    +     
Sbjct: 118 AGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIK-FGLDTHVFVCNTL 176

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG-HSELAEVVAKK 708
            + YC       + G +  A     E+ ++  V   + +++  C   G H++     A +
Sbjct: 177 LDAYC-------KHGLLAAARRVFLEMHDKDAV--TYNAMMMGCSKEGLHTQ-----ALQ 222

Query: 709 LLEMDTRNSMPGYHVLLSNI 728
           L     R  +P  H   S+I
Sbjct: 223 LFAAMRRAGIPATHFTFSSI 242


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 233/743 (31%), Positives = 392/743 (52%), Gaps = 62/743 (8%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYN 146
           A+   S +  +SP    D+      +K+ A  R+ R  +A+H   +R      PS  V N
Sbjct: 39  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 98

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR--RRNVVAWNTIVSWYVKT 204
           +LL  Y+ C                   +     +VF ++     + V++N+++S     
Sbjct: 99  ALLTAYARC------------------GRLAAALEVFGSISDSAHDAVSFNSLISALCLF 140

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA----DVVYGLLVKLGSEYV 260
            R+  A+   R ML  G   ++ + V+V  A+S L    +A       +   +K G  + 
Sbjct: 141 RRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG 200

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFV 318
           +  F  ++ + MYA LG    A+++F        +V  WNTM+   VQ+    EA++   
Sbjct: 201 HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLY 260

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAV 371
            ++ L  +  D VTF SAL A S+L+ LD+G+++HAY+IK+       FVA  ++ + A 
Sbjct: 261 DMVALG-VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT 319

Query: 372 IER--------DVVS--------WNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTV 414
            E+        D+V         WN MI  + Q G+D+E L L   M+ + GF+    T+
Sbjct: 320 HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTM 379

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDS 473
            ++L A +        +  H Y+++ G+     +++ L+DMYA+ G    AR+IF   D 
Sbjct: 380 ASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL 439

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQML---EHNVTPNVVTIASVLPACNPMGNIE 530
              D  +WN +I G    G + +AF   R+M    E  V PN +T+ ++LP C  +    
Sbjct: 440 --PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 497

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK++HG+++R+ LD +V VG++L+DMY+K G +  +  VF ++P +N++T+  +I+ YG
Sbjct: 498 RGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYG 557

Query: 591 QHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            HG+   A  LF  M   G   P+ +TF+A L+ACS++G+VD GLQ+F  M++++ ++P+
Sbjct: 558 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPT 617

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +   CV D+LGR G++ EAY  V  +      +  W ++LG+CRLH +  L E+  ++L
Sbjct: 618 PDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERL 677

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE++   +   ++VLL NIY+  G W    +VR  MR RG+ KE GCSWI+V G ++RF 
Sbjct: 678 LELEPEEA--SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFM 735

Query: 770 SKDQEHPQSHKIYEMLERLAMEM 792
           + +  HP S +++  +E L  EM
Sbjct: 736 AGESAHPASEEVHAHMEALWGEM 758



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 149/300 (49%), Gaps = 26/300 (8%)

Query: 58  ARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           ARQ+FD +  +     +WN +I G+    +  EA+ L+++M+  + +  C+  T +SVL 
Sbjct: 326 ARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET-TMASVLP 384

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA +      +AVH + ++     +RFV N+L++MY+                     K
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR------------------LGK 426

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM---GIRPSTISFVNV 232
            D+  ++F  +   +VV+WNT+++  V      +A +  R M ++   G+ P+ I+ + +
Sbjct: 427 TDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTL 486

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + L        ++G  V+   +   D+ V S+ + MYA+ GC   +R +FD    R
Sbjct: 487 LPGCAILAAPARGKEIHGYAVRHALD--TDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 544

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           NT  WN +I  Y  +    EA  LF ++    E   ++VTF++AL+A S    +D G QL
Sbjct: 545 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 604



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 25/255 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G+  +AR++F  +  P  V WNT+I G V      +A  L  +M++        N  T  
Sbjct: 425 GKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLM 484

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++L  CA       GK +H + +R   +    V ++L++MY+ C                
Sbjct: 485 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC---------------- 528

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                 L   VFD + RRN + WN ++  Y       EA   F  M   G  RP+ ++F+
Sbjct: 529 --GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586

Query: 231 NVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN- 288
               A S  G   +   + + +    G E   D+   +  + +    G  D A  +  + 
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL--ACVVDILGRAGRLDEAYAMVTSM 644

Query: 289 -CLERNTEVWNTMIG 302
              E+    W+TM+G
Sbjct: 645 EAGEQQVSAWSTMLG 659


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 233/743 (31%), Positives = 392/743 (52%), Gaps = 62/743 (8%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYN 146
           A+   S +  +SP    D+      +K+ A  R+ R  +A+H   +R      PS  V N
Sbjct: 39  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 98

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR--RRNVVAWNTIVSWYVKT 204
           +LL  Y+ C                   +     +VF ++     + V++N+++S     
Sbjct: 99  ALLTAYARC------------------GRLAAALEVFGSISDSAHDAVSFNSLISALCLF 140

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA----DVVYGLLVKLGSEYV 260
            R+  A+   R ML  G   ++ + V+V  A+S L    +A       +   +K G  + 
Sbjct: 141 RRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHG 200

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFV 318
           +  F  ++ + MYA LG    A+++F        +V  WNTM+   VQ+    EA++   
Sbjct: 201 HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLY 260

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAV 371
            ++ L  +  D VTF SAL A S+L+ LD+G+++HAY+IK+       FVA  ++ + A 
Sbjct: 261 DMVALG-VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT 319

Query: 372 IER--------DVVS--------WNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTV 414
            E+        D+V         WN MI  + Q G+D+E L L   M+ + GF+    T+
Sbjct: 320 HEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTM 379

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDS 473
            ++L A +        +  H Y+++ G+     +++ L+DMYA+ G    AR+IF   D 
Sbjct: 380 ASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL 439

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQML---EHNVTPNVVTIASVLPACNPMGNIE 530
              D  +WN +I G    G + +AF   R+M    E  V PN +T+ ++LP C  +    
Sbjct: 440 --PDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPA 497

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK++HG+++R+ LD +V VG++L+DMY+K G +  +  VF ++P +N++T+  +I+ YG
Sbjct: 498 RGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYG 557

Query: 591 QHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            HG+   A  LF  M   G   P+ +TF+A L+ACS++G+VD GLQ+F  M++++ ++P+
Sbjct: 558 MHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPT 617

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +   CV D+LGR G++ EAY  V  +      +  W ++LG+CRLH +  L E+  ++L
Sbjct: 618 PDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERL 677

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE++   +   ++VLL NIY+  G W    +VR  MR RG+ KE GCSWI+V G ++RF 
Sbjct: 678 LELEPEEA--SHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFM 735

Query: 770 SKDQEHPQSHKIYEMLERLAMEM 792
           + +  HP S +++  +E L  EM
Sbjct: 736 AGESAHPASEEVHAHMEALWGEM 758



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 149/300 (49%), Gaps = 26/300 (8%)

Query: 58  ARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           ARQ+FD +  +     +WN +I G+    +  EA+ L+++M+  + +  C+  T +SVL 
Sbjct: 326 ARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCET-TMASVLP 384

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA +      +AVH + ++     +RFV N+L++MY+                     K
Sbjct: 385 ACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR------------------LGK 426

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM---GIRPSTISFVNV 232
            D+  ++F  +   +VV+WNT+++  V      +A +  R M ++   G+ P+ I+ + +
Sbjct: 427 TDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTL 486

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + L        ++G  V+   +   D+ V S+ + MYA+ GC   +R +FD    R
Sbjct: 487 LPGCAILAAPARGKEIHGYAVRHALD--TDVAVGSALVDMYAKCGCLALSRAVFDRLPRR 544

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           NT  WN +I  Y  +    EA  LF ++    E   ++VTF++AL+A S    +D G QL
Sbjct: 545 NTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQL 604



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 25/255 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G+  +AR++F  +  P  V WNT+I G V      +A  L  +M++        N  T  
Sbjct: 425 GKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLM 484

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++L  CA       GK +H + +R   +    V ++L++MY+ C                
Sbjct: 485 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC---------------- 528

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                 L   VFD + RRN + WN ++  Y       EA   F  M   G  RP+ ++F+
Sbjct: 529 --GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586

Query: 231 NVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN- 288
               A S  G   +   + + +    G E   D+   +  + +    G  D A  +  + 
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL--ACVVDILGRAGRLDEAYAMVTSM 644

Query: 289 -CLERNTEVWNTMIG 302
              E+    W+TM+G
Sbjct: 645 ETGEQQVSAWSTMLG 659


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 239/761 (31%), Positives = 376/761 (49%), Gaps = 98/761 (12%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY-EAILLYSQMKKSSPYTSCDNYTYSSV 113
           P  +  LF  +       W   +IG  C    Y EA+L + +M+++      DN+   +V
Sbjct: 63  PEASNSLFRRVRLKNVFSW-AAVIGLNCRKGFYQEALLGFKEMQENGLLP--DNFVLPNV 119

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LKAC     +RIGK VH                                +V   YV   +
Sbjct: 120 LKACGGLEWIRIGKVVH-------------------------------GLVSCGYVWKMW 148

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  K    M +RN VAWN+++  YV+     EA+  F  M   G+ P+ ++  +  
Sbjct: 149 GGGGCK-KGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFL 207

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A ++LG  +     + + V  G E   +L   SS I  Y+++G  + A  +F   LE++
Sbjct: 208 SASANLGALQDGKQGHAIAVICGIEMTTNL--GSSLINFYSKVGLIEDAESVFSRMLEKD 265

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN +I GYVQ     +A+ +   ++ L+ + FD VT  + +SA + ++ L LG++ H
Sbjct: 266 VVTWNLLISGYVQIGEVDKALNM-CHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGH 324

Query: 354 AYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
            Y I+N                     +     V N+ I +D++ WNTM++AF + G   
Sbjct: 325 CYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSG 384

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E L L Y+MQ +    + ++  +L+                                   
Sbjct: 385 EALNLFYQMQLESVPPNVISWNSLILG--------------------------------- 411

Query: 454 MYAKSGLIKTARQIFEKNDS--GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            +  SG +  A+ +F +  S     +  TW  +I+G  ++G   EA + F++M E  V P
Sbjct: 412 -FLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKP 470

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           NVV+I  VL AC  + ++++G+ LHG+ IR+ L  ++ + TSL+DMY+K G  + A  VF
Sbjct: 471 NVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVF 530

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             IP+K    Y  MI G+  HG +  AL+L+R +K  G++PD ITF   L ACS+A +V 
Sbjct: 531 DMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVS 590

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EGL++F  M   + I PS EHY C+  +L R G + EA+  +  +  + +V +I GSLL 
Sbjct: 591 EGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDV-QILGSLLA 649

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR H   EL E ++ +LL++   NS  G +V +SN YA  G W+ V KVR+ M+ERGLR
Sbjct: 650 ACREHNKIELEEYLSNQLLKLQPDNS--GNYVAMSNAYAAAGRWDEVKKVRQLMKERGLR 707

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           K  GCSWI VG  +N F + D+ HP++ +IY  L  L ME+
Sbjct: 708 KIPGCSWIQVGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 239/543 (44%), Gaps = 99/543 (18%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            Y  +L+ C   R L  G+ +H   ++       + ++   L+  Y+ C           
Sbjct: 12  VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC----------- 60

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                     +    +F  +R +NV +W  ++    +   Y EA+  F+ M   G+ P  
Sbjct: 61  -------DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDN 113

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
               NV  A   L   +   VV+G LV  G  YV  ++           +          
Sbjct: 114 FVLPNVLKACGGLEWIRIGKVVHG-LVSCG--YVWKMWGGGGCKKGVCGMP--------- 161

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               +RN   WN+MI GYVQN    EAIE+F ++ E + +    VT  S LSA + L  L
Sbjct: 162 ----QRNAVAWNSMIVGYVQNGLNEEAIEVFYEMRE-EGVEPTQVTLSSFLSASANLGAL 216

Query: 347 DLGQQLHAY---------------IIKNFVALPVI-----VLNAVIERDVVSWNTMISAF 386
             G+Q HA                +I  +  + +I     V + ++E+DVV+WN +IS +
Sbjct: 217 QDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGY 276

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FE 445
           VQ G  D+ L + + M+ +    DSVT+  L+SA +++RN  +GK+ H Y +R+ +    
Sbjct: 277 VQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDV 336

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + S ++DMYAK   I  AR++F  N S  +D   WN M+A + + G   EA   F QM 
Sbjct: 337 VVVSSIVDMYAKCEKIGCARRVF--NSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQ 394

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             +V PNV++                                     SLI  +  SG +N
Sbjct: 395 LESVPPNVISW-----------------------------------NSLILGFLNSGQVN 419

Query: 566 YAANVFAKIP----EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
            A ++F ++     + N VT+TT+I G  + G    A+  F+ M+  G++P+ ++ + VL
Sbjct: 420 EAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVL 479

Query: 622 SAC 624
            AC
Sbjct: 480 LAC 482



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 21/238 (8%)

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF---EGMESYLIDMYAKS 458
           M+ +   I       LL      R    G+Q HA +++ G  F   E +E+ L+  YAK 
Sbjct: 1   MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
              + +  +F +     ++  +W A+I    + G  +EA + F++M E+ + P+   + +
Sbjct: 61  DNPEASNSLFRRVRL--KNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPN 118

Query: 519 VLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           VL AC  +  I +GK +HG  S  Y+                K             +P++
Sbjct: 119 VLKACGGLEWIRIGKVVHGLVSCGYVW---------------KMWGGGGCKKGVCGMPQR 163

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           N+V + +MI+GY Q+G++E A+ +F  M+  G+EP  +T  + LSA +  G + +G Q
Sbjct: 164 NAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQ 221



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L  P   S +    + G    A+++FD I      I+N +I GF  +    EA+ LY  +
Sbjct: 505 LSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALYRCL 564

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTC 155
           K+       DN T+++ L AC+    +  G  +    +   + NPS   Y  ++++ S C
Sbjct: 565 KEEG--LKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRC 622


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 231/767 (30%), Positives = 393/767 (51%), Gaps = 57/767 (7%)

Query: 55  PHLARQLFDSITRPTTVIW-NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           P  AR   D I R    +  N ++  +    +  E +  +S  ++       D+ T S V
Sbjct: 48  PPGARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLV--DSATLSCV 105

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           LKAC    +  +G+ +HC  ++C  +        SL++MY  C S  +            
Sbjct: 106 LKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG----------- 154

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF+ M ++NVV W ++++     + + E +  F  M   GI P+  +F +V
Sbjct: 155 -------IEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASV 207

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A++S G       V+   VK G    + +FV +S + MYA+ G  + A+ +F+    R
Sbjct: 208 LSAVASQGALDLGQRVHAQSVKFGCR--SSVFVCNSLMNMYAKCGLVEDAKSVFNWMETR 265

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT++ G   N   +EA++LF +            T+ + +   + L++L L +QL
Sbjct: 266 DMVSWNTLMAGLQLNECELEALQLFHES-RATMGKMTQSTYATVIKLCANLKQLALARQL 324

Query: 353 HAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGL 391
           H+ ++K+   L   V+ A+ +                     R+VVSW  +IS  +QNG 
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
               ++L   M++   M +  T +A+L A+ ++    +  Q HA +++    H   + + 
Sbjct: 385 IPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTA 440

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+  Y+K G  + A  IF+  +   +D   W+AM++ + Q G  E A   F +M    + 
Sbjct: 441 LLASYSKFGSTEDALSIFKMIE--QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 511 PNVVTIASVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN  TI+SV+ AC  P   ++ G+Q H  SI+Y     + V ++L+ MYS+ G I+ A  
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF +  +++ V++ +MI GY QHG S +A+  FR M+  GI+ D +TF+AV+  C++ GL
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V EG Q FD M +++KI P+ EHY C+ D+  R GK+ E    ++++      + +W +L
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAM-VWRTL 677

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR+H + EL +  A KLL ++  +S    +VLLSNIYA  G W+  D+VRK M  R 
Sbjct: 678 LGACRVHKNVELGKFSADKLLSLEPHDS--STYVLLSNIYAAAGKWKERDEVRKLMDYRK 735

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++KE GCSWI +   V+ F + D+ HP S +IY+ L+ +   ++  G
Sbjct: 736 VKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDG 782


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 240/766 (31%), Positives = 385/766 (50%), Gaps = 65/766 (8%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F  +       W TII  +  +     AI ++ +M++      CD  T+ +VLKACA 
Sbjct: 83  EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEG--VRCDAVTFLAVLKACAR 140

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +L  G+++H   +         + N LL++Y +C     A ++               
Sbjct: 141 LGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLL--------------- 185

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
              F+ M R ++V+WN  ++   ++     A+  F+ M   G+RP+ I+ V    AL+  
Sbjct: 186 ---FEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLV---IALTVC 238

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              + A  ++ ++ + G E    L V+++    YA LG    A+++FD   ER+   WN 
Sbjct: 239 ATIRQAQAIHFIVRESGLE--QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNA 296

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+G Y Q+ H  EA  LF ++L  + I    VT ++A +  S L+    G+ +H   ++ 
Sbjct: 297 MLGAYAQHGHMSEAALLFARMLH-EGISPSKVTLVNASTGCSSLR---FGRMIHGCALEK 352

Query: 360 FVALPVIVLNAVIER-------------------DVVSWNTMISAFVQNGLDDEGLMLVY 400
            +   +++ NA+++                    + VSWNTMI+   Q G     + L  
Sbjct: 353 GLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQ 412

Query: 401 EMQKQGFMIDSVTVTALLSA-ASN---LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            MQ +G      T   LL A ASN    R    G++ H+ ++  G   E  + + ++ MY
Sbjct: 413 RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMY 472

Query: 456 AKSGLIKTARQIFEKNDSGDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           A  G I  A   F++    DR D  +WNA+I+  +Q+G  + A   FR+M  H V PN +
Sbjct: 473 ASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  +VL AC     +  G+ +H       ++ N+FV T+L  MY + G +  A  +F K+
Sbjct: 533 TCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKV 592

Query: 575 P-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
             E++ V +  MI  Y Q+G++  AL LF  M+  G  PD  +FV+VLSACS+ GL DEG
Sbjct: 593 AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG 652

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            +IF  M+Q Y I PS +HY C  D+LGR G + +A E ++ +  +  VL +W +LLG+C
Sbjct: 653 WEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVL-VWKTLLGAC 711

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPG---YHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           R +   +   +    + E+D     PG    +V+LSNI A  G W+   +VR EM  RGL
Sbjct: 712 RKYRDVDRGRLANSMVRELD-----PGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RKE G SWI++   V+ F + D+ HP+S +IY  LERL  E+R  G
Sbjct: 767 RKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 171/666 (25%), Positives = 300/666 (45%), Gaps = 74/666 (11%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+A  + R L  G+ +H   +         + N LL +Y  C S  D E          
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVE---------- 82

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF  +  R+  +W TI++ Y +  +   A+  F  M + G+R   ++F+ V
Sbjct: 83  --------EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAV 134

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + LGD      ++  +V+ G +      +A+  + +Y   GC   A  +F+  +ER
Sbjct: 135 LKACARLGDLSQGRSIHAWIVESGLK--GKSVLANLLLHIYGSCGCVASAMLLFEK-MER 191

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN  I    Q+     A+ELF Q ++L+ +    +T + AL+  + +++    Q +
Sbjct: 192 DLVSWNAAIAANAQSGDLGIALELF-QRMQLEGVRPARITLVIALTVCATIRQ---AQAI 247

Query: 353 HAYIIKNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLD 392
           H  + ++ +   ++V  A+                     ERDVVSWN M+ A+ Q+G  
Sbjct: 248 HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E  +L   M  +G     VT+    +  S+LR    G+  H   L  G+  +  + + L
Sbjct: 308 SEAALLFARMLHEGISPSKVTLVNASTGCSSLR---FGRMIHGCALEKGLDRDIVLGNAL 364

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMY + G  + AR +F++      +  +WN MIAG +Q G ++ A   F++M    + P
Sbjct: 365 LDMYTRCGSPEEARHLFKRIPC---NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAP 421

Query: 512 NVVTIASVLP--ACNP--MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
              T  ++L   A NP     +  G++LH   +         +GT+++ MY+  G I+ A
Sbjct: 422 VRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEA 481

Query: 568 ANVF---AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           A  F   A     + V++  +I    QHG  +RAL  FR M   G+ P+ IT VAVL AC
Sbjct: 482 AASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDAC 541

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           + A  + EG  + D ++    ++ +      +A M GR G +  A E  +++  E +V+ 
Sbjct: 542 AGAAALTEGEIVHDHLRHS-GMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVV- 599

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI-------YAEEGNWEN 737
           I+ +++ +   +G   LA    K    M    S P     +S +        A+EG WE 
Sbjct: 600 IFNAMIAAYSQNG---LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEG-WEI 655

Query: 738 VDKVRK 743
              +R+
Sbjct: 656 FRSMRQ 661



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 127/558 (22%), Positives = 239/558 (42%), Gaps = 98/558 (17%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
           G  + A+++FD       V WN ++  +  +    EA LL+++M  +  SP       + 
Sbjct: 274 GHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP-------SK 326

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            +++ A     +LR G+ +H   +    +    + N+LL+MY+ C S  +A  +  K + 
Sbjct: 327 VTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHL-FKRIP 385

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                              N V+WNT+++   +  +   AV  F+ M   G+ P   +++
Sbjct: 386 C------------------NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYL 427

Query: 231 NVFPALSSLGDYKSADV----VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           N+  A++S  +   A      ++  +V  G  Y ++  + ++ + MYA  G  D A   F
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCG--YASEPAIGTAVVKMYASCGAIDEAAASF 485

Query: 287 D-NCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
               +E   +V  WN +I    Q+ H   A+  F + ++L  +  + +T ++ L A +  
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFF-RRMDLHGVAPNQITCVAVLDACAGA 544

Query: 344 QELDLGQQLHAYIIKN------FVALPV---------------IVLNAVIERDVVSWNTM 382
             L  G+ +H ++  +      FVA  +               I     +ERDVV +N M
Sbjct: 545 AALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAM 604

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+A+ QNGL  E L L + MQ++G   D  +  ++LSA S+                 G+
Sbjct: 605 IAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSH----------------GGL 648

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             EG E           + ++ RQ +    S D     +   +    + G L +A    R
Sbjct: 649 ADEGWE-----------IFRSMRQSYGIAPSEDH----YACAVDVLGRAGWLADAEELIR 693

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSK 560
            M   +V P V+   ++L AC    +++ G+ L    +R L   D++ +V   L ++ + 
Sbjct: 694 CM---DVKPTVLVWKTLLGACRKYRDVDRGR-LANSMVRELDPGDESAYV--VLSNILAG 747

Query: 561 SGVINYAANVFAKIPEKN 578
           +G  + AA V  ++  + 
Sbjct: 748 AGKWDEAAEVRTEMESRG 765


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 225/703 (32%), Positives = 373/703 (53%), Gaps = 46/703 (6%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S+L+ C  T++LR  K VH   +         +  SL+N+Y  C     A +V       
Sbjct: 8   SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV------- 60

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFV 230
            +   D+         R +V  WN++VS Y K   + + ++ F+ +L   I  P + ++ 
Sbjct: 61  -FENIDI---------RSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYP 110

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           NV  A  +LG      +++ ++VK G  +V D+ VASS + MYA+   F+ + ++FD   
Sbjct: 111 NVIKAYGALGREFLGRMIHTVVVKSG--HVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP 168

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ER+   WNT+I  + Q     +A+ELF + +E  +   + V+   A+SA S+L  L+ G+
Sbjct: 169 ERDVASWNTVISSFYQRGDAEKALELFGR-MERSDFEPNSVSITVAISACSRLLCLERGK 227

Query: 351 QLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           ++H   +K                    +F+ +   V   +  + +V+WN+MI  +V  G
Sbjct: 228 EIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARG 287

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
                + L+  M  +G      T+T++L A S  RN   GK  H Y++R  +  +  +  
Sbjct: 288 DSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINC 347

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID+Y K G +K A  +F K      +  +WN MI+GY   G   +A   + QM+   V
Sbjct: 348 SLIDLYFKCGEVKLAETVFLKTQKDVVE--SWNVMISGYVSVGNWFKAVDVYDQMVSVGV 405

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P++VT  SVL  C+ +  +E GKQ+H       L+ +  + ++L+DMYSK G +  A+ 
Sbjct: 406 QPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASR 465

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F  IP+K+ V++T MI  YG HG    AL  F  M+  G++PD +TF+AVLSAC +AGL
Sbjct: 466 IFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGL 525

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           +DEG++ F  M+ +Y I+ S E Y C+ D+LGR G+++EAY  +++  E  +  E+  +L
Sbjct: 526 IDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTL 585

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
             +C LH    L   +AK L+E    ++    + +L N+YA   +W+   +VR +M+E G
Sbjct: 586 FCACCLHRDHLLGYTIAKLLVEKYPDDA--STYTVLFNLYASGESWDAAKRVRLKMKEVG 643

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           +RK+ GCSWI++   V  F ++D+ HPQ+  +YE L  L+  M
Sbjct: 644 MRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYECLALLSGHM 686



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 256/542 (47%), Gaps = 47/542 (8%)

Query: 58  ARQLFDSI-TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           AR +F++I  R    IWN+++ G+  N++ ++ + ++ ++  + P    D++TY +V+KA
Sbjct: 57  ARLVFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLL-NCPICVPDSFTYPNVIKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                   +G+ +H   ++        V +SL+ MY+                   ++ +
Sbjct: 116 YGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAK------------------FNLF 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +   +VFD M  R+V +WNT++S + +     +A+  F  M R    P+++S      A 
Sbjct: 158 EDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISAC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L   +    ++   +K   E+  D +V S+ + MY      + AR++F     ++   
Sbjct: 218 SRLLCLERGKEIHRKYLK--KEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVA 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+MI GYV        +EL  +++ ++       T  S L A S+ + L  G+ +H Y+
Sbjct: 276 WNSMIRGYVARGDSKSCVELLNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYV 334

Query: 357 IKNFVALPVIVLNAVI-------------------ERDVV-SWNTMISAFVQNGLDDEGL 396
           I++ V   + +  ++I                   ++DVV SWN MIS +V  G   + +
Sbjct: 335 IRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAV 394

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
            +  +M   G   D VT T++LS  S L   + GKQ H  +    +   E + S L+DMY
Sbjct: 395 DVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 454

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K G +K A +IF  N    +D  +W  MI+ Y  +G   EA   F +M +  V P+ VT
Sbjct: 455 SKCGNVKEASRIF--NSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVT 512

Query: 516 IASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             +VL AC   G I+ G K       +Y ++ ++   + LID+  ++G +  A  +  + 
Sbjct: 513 FLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQK 572

Query: 575 PE 576
           PE
Sbjct: 573 PE 574



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 23/293 (7%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +AR++F  + R + V WN++I G+V        + L ++M       S    T +S+L A
Sbjct: 260 MAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPS--QTTLTSILMA 317

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+ +RNL  GK VH + IR   +   ++  SL+++Y  C     AE V LK         
Sbjct: 318 CSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLK--------- 368

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                     ++  V +WN ++S YV    + +AV  +  M+ +G++P  ++F +V    
Sbjct: 369 ---------TQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTC 419

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L   +    ++  L    S    D  + S+ + MY++ G    A +IF++  +++   
Sbjct: 420 SQLAALEKGKQIH--LSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVS 477

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           W  MI  Y  +  P EA+  F ++ +   +  D VTFL+ LSA      +D G
Sbjct: 478 WTVMISAYGSHGQPREALYHFDEMQKFG-VKPDGVTFLAVLSACGHAGLIDEG 529



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LA  +F    +     WN +I G+V     ++A+ +Y QM   S     D  T++S
Sbjct: 357 GEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQM--VSVGVQPDIVTFTS 414

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL  C++   L  GK +H             + ++LL+MYS C +  +A           
Sbjct: 415 VLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEAS---------- 464

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F+++ +++VV+W  ++S Y    +  EA+  F  M + G++P  ++F+ V
Sbjct: 465 --------RIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAV 516

Query: 233 FPALSSLG 240
             A    G
Sbjct: 517 LSACGHAG 524


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 222/709 (31%), Positives = 376/709 (53%), Gaps = 46/709 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  T  S L+ C  ++ L+ GK +H     C    +  +  SL+  Y +C          
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCH--------- 52

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRP 224
                 DY+  +LV +  D     +V  WN ++S Y    R+VEA++ F ++     +RP
Sbjct: 53  ------DYASAELVFQTNDC--PLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRP 104

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
              ++  V  A   LG       ++  L+K G   + D+FV SS + MYA+   F  A K
Sbjct: 105 DFYTYPVVLKACGGLGRVIYGRRIHNHLLKTG--LIWDVFVGSSLMNMYAKCDQFVDAIK 162

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD   +R+   WN +I  Y ++     A++ F ++ EL     + VTF   +S+ ++L 
Sbjct: 163 LFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELG-FEPNSVTFTVVVSSCTRLL 221

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
            L+ G+++H  +I+  + L   VL+A+++                    ++ ++WN MI+
Sbjct: 222 NLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMIT 281

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +   G     + L+  M  +G     +T+T+++ A+S       GK  H Y+LR+ I  
Sbjct: 282 GYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDV 341

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  ++  LID Y K G + +A  IF        +  +WN MI+G+   G   +A   +  
Sbjct: 342 DIFIDVSLIDFYFKCGYVSSAETIFRT--ISKNEVVSWNVMISGHVMVGNHIQALHIYDN 399

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M EH+V P+ +T +S L AC+ +  ++ G++LH   I + L+ N  V  +L+DMY+K G 
Sbjct: 400 MKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGD 459

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ A  +F ++P+++ V++T+MI  YG HG +  AL LF  M+   +  D++TF+AVLSA
Sbjct: 460 VDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSA 519

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+AGLVDEG   F+ M  +Y I+P  EHY C+ D+LGR G++ EAYE ++   E  + +
Sbjct: 520 CSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDI 579

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +  +L  +C LH +  L   + K L+E+D  +  P  ++LLSN+YA    W+ V KVR+
Sbjct: 580 GLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDD--PSTYILLSNMYASVNKWDEVRKVRR 637

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           +M+E GL+K  GCSWI++   ++ F ++D+ +P +  +YE L  L   M
Sbjct: 638 KMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHM 686



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 261/545 (47%), Gaps = 47/545 (8%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  +F +   P  V +WN ++  +  N    EA+ L+ Q+  +S Y   D YTY  VLKA
Sbjct: 57  AELVFQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNS-YVRPDFYTYPVVLKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C     +  G+ +H H ++       FV +SL+NMY+ C   +DA               
Sbjct: 116 CGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDA--------------- 160

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+FD   +R+V  WN ++S Y K  +   A++ F  M  +G  P++++F  V  + 
Sbjct: 161 ---IKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L + +    V+  L++     + D FV S+ + MY + GC + A+++F+    +N   
Sbjct: 218 TRLLNLERGKEVHRELIE--RRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAIT 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN MI GY         IEL +++ + +      +T  S + A S+  +L  G+ +H YI
Sbjct: 276 WNAMITGYSLKGDSRSCIELLMRMND-EGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYI 334

Query: 357 IKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           ++N      F+ + +I              +   + + +VVSWN MIS  V  G   + L
Sbjct: 335 LRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQAL 394

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
            +   M++     D++T ++ LSA S L   D G++ H  ++ H +   E +   L+DMY
Sbjct: 395 HIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMY 454

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G +  AR++F +     RD  +W +MI  Y  +G   EA   F +M + NV  + VT
Sbjct: 455 AKCGDVDEARKLFHQ--LPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVT 512

Query: 516 IASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             +VL AC+  G ++ G    +   ++Y +   +   + LID+  ++G ++ A  +  + 
Sbjct: 513 FLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRS 572

Query: 575 PEKNS 579
            E  S
Sbjct: 573 KETRS 577



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 124/279 (44%), Gaps = 43/279 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F +I++   V WN +I G V      +A+ +Y  MK+   +   D  T+SS L AC
Sbjct: 362 AETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEH--HVKPDALTFSSTLSAC 419

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L  G+ +H   I      +  V  +LL+MY+ C              +VD ++  
Sbjct: 420 SQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKC-------------GDVDEAR-- 464

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  + +R++V+W +++  Y    +  EA+R F  M ++ +R  +++F+ V  A S
Sbjct: 465 ---KLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACS 521

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVA----------SSAIFMYAELGCFDFARKIFD 287
             G           LV  G  Y N++ V           S  I +    G    A +I  
Sbjct: 522 HAG-----------LVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQ 570

Query: 288 NCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELD 324
              E  +++   +T+    + +N+ V  I++   ++E+D
Sbjct: 571 RSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVD 609


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 221/732 (30%), Positives = 384/732 (52%), Gaps = 51/732 (6%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    AR++FD +       WN +I G   ++ P EA+ ++ +M+        D+ +
Sbjct: 173 CKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEP-DSVS 231

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
             ++  A +   ++   K++H + +R C       V NSL++MYS C             
Sbjct: 232 ILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG---VVSNSLIDMYSKC------------- 275

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                 +  L  ++FD M  ++ ++W T+++ YV    Y E ++    M R  I+ + IS
Sbjct: 276 -----GEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKIS 330

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            VN   A +   D +    V+   ++LG    +D+ VA+  + MYA+ G    A++ F +
Sbjct: 331 VVNSVLAATETRDLEKGKEVHNYALQLG--MTSDIVVATPIVSMYAKCGELKKAKEFFLS 388

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+  VW+  +   VQ  +P EA+ +F Q ++ + +  D     S +SA +++    L
Sbjct: 389 LEGRDLVVWSAFLSALVQAGYPGEALSIF-QEMQHEGLKPDKTILSSLVSACAEISSSRL 447

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G+ +H Y+IK  +   + V   ++                     +DVV+WNT+I+ F +
Sbjct: 448 GKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTK 507

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
            G     L +   +Q  G   DS T+ +LLSA + L +  +G   H  ++++GI  E  +
Sbjct: 508 CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHV 567

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +  LIDMYAK G + TA  +F  N    +D+ +WN MIAGY  NG   EA   F QM   
Sbjct: 568 KVALIDMYAKCGSLCTAENLFHLNKH-VKDEVSWNVMIAGYLHNGCANEAISTFNQMKLE 626

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +V PN+VT  ++LPA + +  +      H   IR     +  +G SLIDMY+KSG ++Y+
Sbjct: 627 SVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYS 686

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
              F ++  K ++++  M+ GY  HG  E AL+LF  M+   +  D++++++VLSAC +A
Sbjct: 687 EKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHA 746

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GL+ EG  IF  M +++ ++PS EHY C+ D+LG  G   E    + ++  E +  ++WG
Sbjct: 747 GLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDA-QVWG 805

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LLG+C++H + +L E+    LL+++ RN++  ++++LS+IYA+ G W +  + R  M +
Sbjct: 806 ALLGACKMHSNVKLGEIALHHLLKLEPRNAV--HYIVLSDIYAQCGRWIDARRTRSNMTD 863

Query: 748 RGLRKEVGCSWI 759
            GL+K  G SW+
Sbjct: 864 HGLKKNPGYSWV 875



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 182/663 (27%), Positives = 323/663 (48%), Gaps = 53/663 (7%)

Query: 63  DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRN 122
           +SIT P+ ++WN++I  +   +L  EAI  Y  M  S      D YT++ VLKAC    +
Sbjct: 85  NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTM--SYMGLEPDKYTFTFVLKACTGALD 142

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
              G A+H            F+   L++MY              K   +D ++     KV
Sbjct: 143 FHEGVAIHQDIASRELECDVFIGTGLVDMYC-------------KMGHLDNAR-----KV 184

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGD 241
           FD M  ++V +WN ++S   ++    EA+  F RM +  G+ P ++S +N+ PA+S L D
Sbjct: 185 FDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLED 244

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
             S   ++G +V+     V    V++S I MY++ G    A +IFD    ++   W TM+
Sbjct: 245 VDSCKSIHGYVVRRCVFGV----VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMM 300

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--- 358
            GYV +    E ++L  + ++   I  + ++ ++++ A ++ ++L+ G+++H Y ++   
Sbjct: 301 AGYVHHGCYFEVLQLLDE-MKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGM 359

Query: 359 ---NFVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                VA P++ + A              +  RD+V W+  +SA VQ G   E L +  E
Sbjct: 360 TSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQE 419

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           MQ +G   D   +++L+SA + + +  +GK  H Y+++  +  +  + + L+ MY +   
Sbjct: 420 MQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKS 479

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
              A  +F  N    +D   WN +I G+T+ G    A   F ++    V P+  T+ S+L
Sbjct: 480 FMYAMTLF--NRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLL 537

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNS 579
            AC  + ++ LG   HG  I+  ++  + V  +LIDMY+K G +  A N+F      K+ 
Sbjct: 538 SACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDE 597

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI GY  +G +  A+S F  MK   + P+ +TFV +L A SY  ++ E +  F  
Sbjct: 598 VSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMA-FHA 656

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
                    ST     + DM  + G++  + +   E+  +G +   W ++L    +HG  
Sbjct: 657 CIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTI--SWNAMLSGYAMHGQG 714

Query: 700 ELA 702
           E+A
Sbjct: 715 EVA 717


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 233/768 (30%), Positives = 386/768 (50%), Gaps = 59/768 (7%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  A QLFD         +N ++  F  NN   EA+ L+  +  S      D  T S  
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG--LGVDGLTLSCA 110

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK C    +  +G+ VHC  ++        V  SL++MY       D             
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGR----------- 159

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +FD M  +NVV+W +++S Y +     E +     M   G+ P+  +F  V 
Sbjct: 160 -------GIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            AL+     +    V+ ++VK G E+    FV ++ I MY +      A  +FD+ + R+
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTT--FVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           +  WN MIGGY      +E  ++F   + L  +      F +AL   SQ +EL+  +QLH
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMF-HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLH 329

Query: 354 AYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLD 392
             ++KN       +  A++                       +VV+W  MI  FVQN  +
Sbjct: 330 CGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNN 389

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
           ++ + L  +M ++G   +  T + +L+     +   +  Q HA +++   ++E + S   
Sbjct: 390 EKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIK--AYYEKVPSVAT 443

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D Y K+G +  + ++F    +  +D   W+AM+ G  Q    E+A   F Q+++  V
Sbjct: 444 ALLDAYVKTGNVVESARVFYSIPA--KDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501

Query: 510 TPNVVTIASVLPACNP-MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            PN  T +SV+ AC+     +E GKQ+H  +++      + V ++L+ MYSK G I  A 
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF +  E++ V++ +MI GYGQHG +++AL +F+ M+  G+  D +TF+ VL+AC++AG
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV+EG + F++M ++Y I    EHY C+ D+  R G   +A + +  +    +   IW +
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASP-TIWRT 680

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL +CR+H + EL ++ A+KL+ +   N   GY VLLSNI+A  GNWE    VRK M ER
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVSLQP-NDAVGY-VLLSNIHAVAGNWEEKAHVRKLMDER 738

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++KE GCSWI++   +  F + D  HP S  +Y  LE L++++++ G
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMG 786


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 243/839 (28%), Positives = 409/839 (48%), Gaps = 143/839 (17%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS-----CDNYT 109
           PH +R LF     P    +N        +  P++ + +       SP++S         T
Sbjct: 3   PHTSRHLF-----PIRFFFN------FQSKSPFKTLPI-------SPFSSYQATPTKKKT 44

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +S + + C++ + L  GK  H   I     P+ FV N L+ MY  C              
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKC-------------- 90

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK------TERYVEA----------VRQ 213
               S      KVFD M +R+ V+WN ++  Y         ++  +A          +  
Sbjct: 91  ----SDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFD 146

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG----------------- 256
           FRM  RMG      +F  V  + SSL D+     ++GL VK+G                 
Sbjct: 147 FRMG-RMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 205

Query: 257 ----------------------------------SEYVNDLFVASSAIFMYAELGCF-DF 281
                                             +++  D+ + ++ + MY +     D 
Sbjct: 206 CCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDC 265

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           + ++F++    N + +N +I GY +++  +EA+ +F ++L+   +  D+V+   A  A +
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMF-RLLQKSGLGLDEVSLSGAXRACA 324

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            ++    G Q+H   +K+     + V NA+++                    RD VSWN 
Sbjct: 325 VIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 384

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+A  QNG +++ L L   M + G   D  T  ++L A +  +  + G + H  +++  
Sbjct: 385 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 444

Query: 442 IHFEGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           +   G++S+    LIDMY+K G+++ A ++ ++    ++   +WNA+I+G++     EEA
Sbjct: 445 M---GLDSFVGIALIDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFSLQKQSEEA 499

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F +MLE  V P+  T A++L  C  +  +ELGKQ+H   I+  L  + ++ ++L+DM
Sbjct: 500 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDM 559

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G +     +F K P ++ VT+  M+ GY QHG+ E AL +F  M+   ++P+  TF
Sbjct: 560 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 619

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +AVL AC + GLV++GL  F  M   Y + P  EHY CV D++GR G+V +A E ++ + 
Sbjct: 620 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 679

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E + + IW +LL  C++HG+ E+AE  A  +L+++  +S    +VLLSNIYA  G W  
Sbjct: 680 FEADAV-IWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAA--YVLLSNIYANAGMWNE 736

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V K+RK MR  GL+KE GCSWI++   V+ F   D+ HP+S +IYE L+ L  EM+  G
Sbjct: 737 VTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 795


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 223/657 (33%), Positives = 345/657 (52%), Gaps = 96/657 (14%)

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  +      L   + A  V+G L++  + +  ++F+ +  I +Y + G  D+ARK+FD 
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQ--TPFCEEVFIQNRLIDVYGKCGYLDYARKVFDR 84

Query: 289 CLERNTEV-------------------------------WNTMIGGYVQNNHPVEAIELF 317
             ERN                                  WN+MI G+ Q++   EA++ F
Sbjct: 85  MSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWF 144

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI----------- 366
           V+ +  D+ V +D +F S LSA S+L++L LG Q+H  I K+  +L V            
Sbjct: 145 VR-MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203

Query: 367 ---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                    V + + E++VVSWN +I+ + QNG   E L     M + GF  D VT+ ++
Sbjct: 204 CGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKND-- 472
           +SA + L     G Q HA +++    F     + + L+DMYAK G +  AR +F++    
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSD-KFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 473 ---------SG------------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                    SG                   +D  +WNA+IAGYTQNG  EEA   FR + 
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYS 559
             +V P   T  ++L A   + ++ELG+Q H      GF  +   + ++FVG SLIDMY 
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G +     VF  + EK+ V++ TMI+GY Q+G    AL LF+ M   G +PD +T + 
Sbjct: 443 KCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L ACS+AGLV+EG + F  M +E+ + P  +HY C+ D+LGR G + EA + ++ + ++
Sbjct: 503 TLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQ 562

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            + + +W SLL +C++H +  L + VA+K+ E+D  +S P  +VLL+N+Y+E G W +  
Sbjct: 563 PDAV-VWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGP--YVLLANMYSELGRWGDAV 619

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            VRK MR RG+ K+ GCSWID+   V+ F  KD+ HPQ  +IY +L+ L   MR AG
Sbjct: 620 SVRKLMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAG 676



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 176/650 (27%), Positives = 296/650 (45%), Gaps = 121/650 (18%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  ++ +L  C + R+ R  ++VH   I+       F+ N L+++Y  C     A  V 
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 166 LKYVEVDYSKYDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            +  E +   ++ +               +F  M  ++  +WN++++ + + +R+ EA+ 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
            F  M R     +  SF +   A S L D K    ++GL+ K  S+Y  D+F+ S  I  
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISK--SKYSLDVFMGSGLIDF 200

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G    AR++FD   E+N   WN +I  Y QN   +EA+E F ++ EL     D+VT
Sbjct: 201 YSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELG-FKPDEVT 259

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKN-----------------------------FVAL 363
             S +SA + L     G Q+HA ++K+                             F  +
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRM 319

Query: 364 PVIVLNAVIE-------------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           PV   NAV E                         +D+VSWN +I+ + QNG ++E L L
Sbjct: 320 PV--RNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGL 377

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-------SYL 451
              ++++       T   LL+A++NL + ++G+Q H+++++HG  F+  E       + L
Sbjct: 378 FRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSL 437

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           IDMY K G ++   ++FE  +  ++D  +WN MI GY QNG   EA   F++MLE    P
Sbjct: 438 IDMYMKCGSVEEGLRVFE--NMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKP 495

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + VT+   L AC+  G +E G+       RY              M  + G+        
Sbjct: 496 DHVTMIGTLCACSHAGLVEEGR-------RYFF-----------SMTKEHGL-------- 529

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +P K+   YT M+   G+ G  E A  L  SM     +PDA+ + ++LSAC     + 
Sbjct: 530 --LPVKDH--YTCMVDLLGRAGCLEEAKDLIESMPK---QPDAVVWSSLLSACKVHRNIT 582

Query: 632 EGLQIFDLMQQEYKIQP-STEHYCCVADM---LGRVGKVVEAYEFVKELG 677
            G  +    ++ ++I P S+  Y  +A+M   LGR G  V   + ++  G
Sbjct: 583 LGKYV---AEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRG 629



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 231/530 (43%), Gaps = 113/530 (21%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           LF  +       WN++I GF  ++   EA+  + +M +       ++Y++ S L AC+  
Sbjct: 112 LFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVL--NDYSFGSGLSACSRL 169

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           ++L++G  +H    +   +   F+ + L++ YS C       +VG               
Sbjct: 170 KDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC------GLVGCAR------------ 211

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD M  +NVV+WN +++ Y +    +EA+  F  M  +G +P  ++  +V  A ++L 
Sbjct: 212 RVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLA 271

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-----NCLERNTE 295
            +K    ++  +VK   ++ NDL + ++ + MYA+ G  + AR +FD     N +   T 
Sbjct: 272 AFKEGVQIHARVVK-SDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTM 330

Query: 296 V--------------------------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           V                          WN +I GY QN    EA+ LF ++L+ + +   
Sbjct: 331 VSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF-RMLKRESVCPT 389

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKN------------FVALPVI----------- 366
             TF + L+A + L +L+LG+Q H++++K+            FV   +I           
Sbjct: 390 HYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEE 449

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V   ++E+D VSWNTMI  + QNG   E L L  +M + G   D VT+   L A S 
Sbjct: 450 GLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS- 508

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
                     HA L+  G        Y   M  + GL+              +D  T   
Sbjct: 509 ----------HAGLVEEG------RRYFFSMTKEHGLLPV------------KDHYT--C 538

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
           M+    + G LEEA      M +    P+ V  +S+L AC    NI LGK
Sbjct: 539 MVDLLGRAGCLEEAKDLIESMPKQ---PDAVVWSSLLSACKVHRNITLGK 585



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 30/293 (10%)

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
           F  DS     LL     LR+    +  H  L++     E  +++ LID+Y K G +  AR
Sbjct: 20  FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 466 QIFEK----------------------NDSG-------DRDQATWNAMIAGYTQNGLLEE 496
           ++F++                      ++S        ++DQ +WN+MIAG+ Q+   EE
Sbjct: 80  KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEE 139

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
           A   F +M   +   N  +  S L AC+ + +++LG Q+HG   +     +VF+G+ LID
Sbjct: 140 ALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLID 199

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
            YSK G++  A  VF  + EKN V++  +I  Y Q+G +  AL  F  M   G +PD +T
Sbjct: 200 FYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVT 259

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
             +V+SAC+      EG+QI   + +  K +        + DM  + G+V EA
Sbjct: 260 LASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEA 312


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 223/643 (34%), Positives = 355/643 (55%), Gaps = 35/643 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS-SL 239
           K+FD M  RN V W  ++S Y +     +A    + M+  G  P+  +F +   A   S+
Sbjct: 56  KLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESM 115

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVA--SSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              +    V+G  ++ G   +ND  VA  +  I MYA+ G  D AR +F   +++++  W
Sbjct: 116 LWRRKGRQVHGYAIRTG---LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSW 172

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+MI G  QN    +A++ +   +    ++  +   +SALS+ + L  + LGQQ H   I
Sbjct: 173 NSMITGLDQNKCFEDAVKSY-NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGI 231

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD-DEGL 396
           K  + + V V N ++                    ERD VSWNT+I A   +G    E +
Sbjct: 232 KLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            +  EM + G+  + VT   LL+  S+L    +  Q HA +L++ +  +  +E+ L+  Y
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACY 351

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            KSG ++   +IF +  S  RD+ +WN+MI+GY  N LL +A      M++     +  T
Sbjct: 352 GKSGEMENCEEIFSRM-SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFT 410

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            A+VL AC  +  +E G ++H  +IR  L+ +V +G++L+DMYSK G I+YA+  F  +P
Sbjct: 411 FATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMP 470

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            +N  ++ +MI GY +HG  + AL LF  MK  G  PD ITFV VLSACS+ GLVDEG +
Sbjct: 471 VRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFE 530

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS-CR 694
            F  M + Y + P  EHY C+ D+LGR G++ +   F+ ++  + N+L IW ++LG+ CR
Sbjct: 531 YFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNIL-IWRTVLGACCR 589

Query: 695 LHGH-SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
            +G  +EL    A+ L  MD +N++   +VLLSN+YA  G WE++ + R+ MRE  ++KE
Sbjct: 590 GNGRKTELGRRAAEMLFNMDPQNAVN--YVLLSNMYASGGKWEDMARTRRAMREAAVKKE 647

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            GCSW+ +   V+ F + D  HP+   IY  L+ L  ++R+AG
Sbjct: 648 AGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAG 690



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 275/557 (49%), Gaps = 51/557 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V W  +I G+  N +P +A  +  +M         + + + S ++AC
Sbjct: 54  ARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKEMIFEGFLP--NRFAFGSAIRAC 111

Query: 118 AETRNL-RIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            E+    R G+ VH + IR   N ++  V N L+NMY+ C              ++D+++
Sbjct: 112 QESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKC-------------GDIDHAR 158

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 VF  M  ++ V+WN++++   + + + +AV+ +  M + G+ PS  + ++   +
Sbjct: 159 -----SVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSS 213

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +SLG        +G  +KLG +   D+ V+++ + +YAE       +K+F   LER+  
Sbjct: 214 CASLGCILLGQQTHGEGIKLGLDM--DVSVSNTLLALYAETSRLAECQKVFSWMLERDQV 271

Query: 296 VWNTMIGGYVQNNHPV-EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            WNT+IG    +   V EAIE+F++++       + VTF++ L+ VS L    L  Q+HA
Sbjct: 272 SWNTVIGALADSGASVSEAIEVFLEMMRAGWSP-NRVTFINLLATVSSLSTSKLSHQIHA 330

Query: 355 YIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDD 393
            I+K  V     + NA++                      RD VSWN+MIS ++ N L  
Sbjct: 331 LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLC 390

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           + + LV+ M ++G  +D  T   +LSA + +   + G + HA  +R  +  +  + S L+
Sbjct: 391 KAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY+K G I  A + F  N    R+  +WN+MI+GY ++G  + A   F +M      P+
Sbjct: 451 DMYSKCGRIDYASRFF--NLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPD 508

Query: 513 VVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            +T   VL AC+ +G ++ G +     +  Y L   V   + ++D+  ++G ++   N  
Sbjct: 509 HITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFI 568

Query: 572 AKIPEKNSVTYTTMILG 588
            K+P K ++     +LG
Sbjct: 569 NKMPIKPNILIWRTVLG 585



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 37/267 (13%)

Query: 51  QEGRPHLARQLFDSIT-RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           + G      ++F  ++ R   V WN++I G++ N L  +A+ L   M +      C  +T
Sbjct: 353 KSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDC--FT 410

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +++VL ACA    L  G  VH   IR        + ++L++MYS C              
Sbjct: 411 FATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKC-------------- 456

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                + D   + F+ M  RN+ +WN+++S Y +      A+R F  M   G  P  I+F
Sbjct: 457 ----GRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITF 512

Query: 230 VNVFPALSSLG-------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           V V  A S +G        +KS   VYGL+ ++   Y       S  + +    G  D  
Sbjct: 513 VGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRV-EHY-------SCMVDLLGRAGELDKI 564

Query: 283 RKIFDNC-LERNTEVWNTMIGGYVQNN 308
               +   ++ N  +W T++G   + N
Sbjct: 565 ENFINKMPIKPNILIWRTVLGACCRGN 591


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 213/636 (33%), Positives = 347/636 (54%), Gaps = 29/636 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD M  RN V++ T++  Y ++ +++EA   F  +   G   +   F  V   L S+  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +   +V+G ++K+G  Y ++ F+ ++ I  Y+  GC   AR++FD    ++   W  MI
Sbjct: 62  AELGRIVHGCVLKVG--YGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-- 359
             Y +N+   EA+E F Q + +     ++ TF   L A   LQ  D G+ +H  ++K   
Sbjct: 120 ASYAENDCFSEALEFFSQ-MRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178

Query: 360 ----FVALPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
               +V + ++ L                + + DV+ W+ MIS F Q+G  ++ L +  +
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGL 460
           M++   + +  T +++L A++++ + D+ K  H + L+ G+  +   S  L+  YAK G 
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           I+ + ++FE     DR+  +WN +I  Y Q G  E A   F  ML + V    VT +S+L
Sbjct: 299 IEQSMELFEA--LSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSIL 356

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +  +ELG Q+H  + + +  Q+V VG +LIDMY+K G I  A  +F  +  ++ V
Sbjct: 357 RACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKV 416

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++  +I GY  HG+   A+ +F  MK    +PD +TFV VLSACS  G +DEG Q F  M
Sbjct: 417 SWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSM 476

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           +Q+Y I+P  EHY C+  ++GR G + +A +F++++  E +V+ IW +LLG+C +H   E
Sbjct: 477 KQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVM-IWRALLGACVIHNDVE 535

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L  + A+++LE++ R+     HVLLSNIYA    W NV  VRK M+ +G++KE G SWI+
Sbjct: 536 LGRISAQRVLELEPRDEAS--HVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIE 593

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G V+ F   D  H     I  MLE L M+ R AG
Sbjct: 594 NQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAG 629



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 262/553 (47%), Gaps = 53/553 (9%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +FD +    TV + T+I G+  +N   EA  L++++         + + +++VLK     
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGH--ELNPFVFTTVLKLLVSM 59

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEMVGLKYVEVDYSKYDL 178
               +G+ VH   ++     + F+  +L++ YS   C+S                    +
Sbjct: 60  EWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVS--------------------M 99

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VFD +  +++V+W  +++ Y + + + EA+  F  M   G +P+  +F  V  A   
Sbjct: 100 AREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLG 159

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L ++ +   V+  ++K  + Y  DL+V    + +Y   G  D A + F +  + +   W+
Sbjct: 160 LQNFDAGKTVHCSVLK--TNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWS 217

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI  + Q+    +A+E+F Q +    ++ +  TF S L A + ++ LDL + +H + +K
Sbjct: 218 FMISRFAQSGQSEKALEIFCQ-MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK 276

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
             ++  V V NA++                    +R+ VSWNT+I ++VQ G  +  L L
Sbjct: 277 AGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSL 336

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYA 456
              M +       VT +++L A + L   ++G Q H  L    I+ +   + + LIDMYA
Sbjct: 337 FSNMLRYQVQATEVTYSSILRACATLAALELGLQVHC-LTAKTIYGQDVAVGNALIDMYA 395

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G IK AR +F+  D   RD+ +WNA+I GY+ +GL  EA   F  M E    P+ +T 
Sbjct: 396 KCGSIKDARFMFDMLDL--RDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTF 453

Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             VL AC+  G ++ GKQ        Y ++  +   T ++ +  +SG ++ A      IP
Sbjct: 454 VGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIP 513

Query: 576 EKNSVTYTTMILG 588
            + SV     +LG
Sbjct: 514 FEPSVMIWRALLG 526



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 207/440 (47%), Gaps = 47/440 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD I+    V W  +I  +  N+   EA+  +SQM+ +      +N+T++ 
Sbjct: 95  GCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKP--NNFTFAG 152

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC   +N   GK VHC  ++       +V   LL +Y+ C  + DA           
Sbjct: 153 VLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAW---------- 202

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   + F  M + +V+ W+ ++S + ++ +  +A+  F  M R  + P+  +F +V
Sbjct: 203 --------RAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSV 254

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + +     +  ++G  +K G     D+FV+++ +  YA+ GC + + ++F+   +R
Sbjct: 255 LQASADIESLDLSKTIHGHALKAG--LSTDVFVSNALMACYAKCGCIEQSMELFEALSDR 312

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WNT+I  YVQ      A+ LF  +L   ++   +VT+ S L A + L  L+LG Q+
Sbjct: 313 NDVSWNTIIVSYVQLGDGERALSLFSNMLRY-QVQATEVTYSSILRACATLAALELGLQV 371

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H    K      V V NA+I+                    RD VSWN +I  +  +GL 
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG 431

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY- 450
            E + +   M++     D +T   +LSA SN    D GKQ    + + +GI    ME Y 
Sbjct: 432 VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIE-PCMEHYT 490

Query: 451 -LIDMYAKSGLIKTARQIFE 469
            ++ +  +SG +  A +  E
Sbjct: 491 CMVWLMGRSGNLDQAVKFIE 510



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 136/261 (52%), Gaps = 7/261 (2%)

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
           +V + + ER+ VS+ T+I  + Q+    E   L   +  +G  ++    T +L    ++ 
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 426 NQDVGKQTHAYLLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
             ++G+  H  +L+ G     F G  + LID Y+ SG +  AR++F++  S  +D  +W 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIG--TALIDAYSVSGCVSMAREVFDEISS--KDMVSWT 116

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
            MIA Y +N    EA   F QM      PN  T A VL AC  + N + GK +H   ++ 
Sbjct: 117 GMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKT 176

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
             +++++VG  L+++Y++ G  + A   F  +P+ + + ++ MI  + Q G SE+AL +F
Sbjct: 177 NYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF 236

Query: 603 RSMKGCGIEPDAITFVAVLSA 623
             M+   + P+  TF +VL A
Sbjct: 237 CQMRRAFVIPNQFTFSSVLQA 257



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 26/268 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF++++    V WNTII+ +V       A+ L+S M +     +    TYSS+L+ACA 
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQAT--EVTYSSILRACAT 361

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L +G  VHC   +        V N+L++MY+ C S  DA                  
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF---------------- 405

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +FD +  R+ V+WN I+  Y      VEA++ F +M     +P  ++FV V  A S+ 
Sbjct: 406 --MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNT 463

Query: 240 GDYKSADVVYGLLVK-LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERNTEVW 297
           G        +  + +  G E   + +  +  +++    G  D A K  ++   E +  +W
Sbjct: 464 GRLDEGKQYFTSMKQDYGIEPCMEHY--TCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIW 521

Query: 298 NTMIGGYVQNNHPVEAIELFVQ-VLELD 324
             ++G  V +N  VE   +  Q VLEL+
Sbjct: 522 RALLGACVIHN-DVELGRISAQRVLELE 548


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 233/768 (30%), Positives = 385/768 (50%), Gaps = 59/768 (7%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  A QLFD         +N ++  F  NN   EA+ L+  +  S      D  T S  
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSG--LGVDGLTLSCA 110

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK C    +  +G+ VHC  ++        V  SL++MY       D             
Sbjct: 111 LKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGR----------- 159

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +FD M  +NVV+W +++S Y +     E +     M   G+ P+  +F  V 
Sbjct: 160 -------GIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVL 212

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            AL+     +    V+ ++VK G E+    FV ++ I MY +      A  +FD+ + R+
Sbjct: 213 GALADESIIEGGVQVHAMIVKNGFEFTT--FVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           +  WN MIGGY      +E  ++F   + L  +      F +AL   SQ +EL+  +QLH
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMF-HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLH 329

Query: 354 AYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLD 392
             ++KN       +  A++                       +VV+W  MI  FVQN  +
Sbjct: 330 CGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNN 389

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
            + + L  +M ++G   +  T + +L+     +   +  Q HA +++   ++E + S   
Sbjct: 390 KKAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIK--AYYEKVPSVAT 443

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D Y K+G +  + ++F    +  +D   W+AM+ G  Q    E+A   F Q+++  V
Sbjct: 444 ALLDAYVKTGNVVESARVFYSIPA--KDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGV 501

Query: 510 TPNVVTIASVLPACNP-MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            PN  T +SV+ AC+     +E GKQ+H  +++      + V ++L+ MYSK G I  A 
Sbjct: 502 KPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAE 561

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF +  E++ V++ +MI GYGQHG +++AL +F+ M+  G+  D +TF+ VL+AC++AG
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV+EG + F++M ++Y I    EHY C+ D+  R G   +A + +  +    +   IW +
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASP-TIWRT 680

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL +CR+H + EL ++ A+KL+ +   N   GY VLLSNI+A  GNWE    VRK M ER
Sbjct: 681 LLAACRVHRNLELGKLAAEKLVSLQP-NDAVGY-VLLSNIHAVAGNWEEKAHVRKLMDER 738

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++KE GCSWI++   +  F + D  HP S  +Y  LE L++++++ G
Sbjct: 739 KVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMG 786


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 232/710 (32%), Positives = 360/710 (50%), Gaps = 83/710 (11%)

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
           L+ Q     PY    N+   ++L  C   +NL   K +H   I+   + ++F  + L+  
Sbjct: 17  LHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEF 73

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
            +       +    L Y  +          +F+++ + N   WNT++     +   V A+
Sbjct: 74  CAI------SPFGNLSYALL----------LFESIEQPNQFIWNTMIRGNSLSSSPVGAI 117

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
             +  ML  G+ P++ +F  +  + + +G  +    ++G ++KLG E  +D FV +S I 
Sbjct: 118 DFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE--SDPFVHTSLIN 175

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MYA+ G   +A  +F     R+   +  +I GY       +A  LF ++           
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEI----------- 224

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
                                           PV        RD VSWN MI+ + Q+G 
Sbjct: 225 --------------------------------PV--------RDAVSWNAMIAGYAQSGR 244

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
            +E L    EM++     +  T+  +LSA +   + ++G    +++  HG+     + + 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMY+K G +  AR +FE     ++D  +WN MI GY+     +EA   FR+M + NV 
Sbjct: 305 LIDMYSKCGDLDKARDLFE--GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN VT  S+LPAC  +G ++LGK +H +   ++L   N  + TSLIDMY+K G I  A  
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VFA +  K+  ++  MI G   HG +  AL LFR M+  G EPD ITFV VLSACS+AGL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--ELGEEGNVLEIWG 687
           V+ G Q F  M ++Y I P  +HY C+ D+LGR G   EA   +K  E+  +G    IWG
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDG---AIWG 539

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           SLLG+CR+HG+ EL E  AK L E++  N  PG +VLLSNIYA  G W++V ++R ++ +
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPEN--PGAYVLLSNIYATAGRWDDVARIRTKLND 597

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           +G++K  GCS I+V   V+ F   D+ H QS  IY+ML+ +   +  AG+
Sbjct: 598 KGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGH 647



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 281/651 (43%), Gaps = 129/651 (19%)

Query: 1   MASSSVPLPLPPPP----PTATPP-------PP-----------QLPQIHSLSPPIPKLK 38
           +AS S  L +PPP     PT+ PP       P             L QIHS         
Sbjct: 3   LASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHN 62

Query: 39  TPTIRSRLSKICQ---EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           T    S+L + C     G    A  LF+SI +P   IWNT+I G   ++ P  AI  Y +
Sbjct: 63  TQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVR 122

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M         ++YT+  +LK+CA+    + GK +H H ++       FV+ SL+NMY   
Sbjct: 123 MLLCG--VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY--- 177

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKV--------------FDTMRR-------RNVVAW 194
                A+   L Y E+ +SK  L   V               D  RR       R+ V+W
Sbjct: 178 -----AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N +++ Y ++ R+ EA+  F+ M R  + P+  + V V  A +  G  +  + V   +  
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G    ++L + ++ I MY++ G  D AR +F+   E++   WN MIGGY   N   EA+
Sbjct: 293 HG--LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEAL 350

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-------- 366
            LF + ++   +  +DVTF+S L A + L  LDLG+ +HAYI K F+ L           
Sbjct: 351 ALFRK-MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLID 409

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        V   +  + + SWN MIS    +G  +  L L  +M+ +GF  D +T
Sbjct: 410 MYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDIT 469

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF----E 469
              +LSA S+                                  +GL++  RQ F    E
Sbjct: 470 FVGVLSACSH----------------------------------AGLVELGRQCFSSMVE 495

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
             D   + Q  +  MI    + GL +EA    + M    + P+     S+L AC   GN+
Sbjct: 496 DYDISPKLQ-HYGCMIDLLGRAGLFDEAEALMKNM---EMKPDGAIWGSLLGACRVHGNV 551

Query: 530 ELGKQLHGFSIRYLLD---QNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ELG+    F+ ++L +   +N      L ++Y+ +G  +  A +  K+ +K
Sbjct: 552 ELGE----FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDK 598



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 40/420 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ I     V WN +I G+  +    EA+  + +MK+++   + +  T  +VL AC
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN--VAPNESTMVTVLSAC 274

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++ +L +G  V           +  + N+L++MYS C                     D
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKC------------------GDLD 316

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F+ +  +++++WN ++  Y     Y EA+  FR M +  + P+ ++FV++ PA +
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376

Query: 238 SLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            LG       ++  + K  LG   + +  + +S I MYA+ G  + A+++F     ++  
Sbjct: 377 YLGALDLGKWIHAYIDKKFLG---LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI G   + H   A+ELF Q+ + +    DD+TF+  LSA S    ++LG+Q  + 
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +++++   P           +  +  MI    + GL DE   L+  M+ +    D     
Sbjct: 493 MVEDYDISP----------KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP---DGAIWG 539

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK-NDSG 474
           +LL A     N ++G+    +L        G    L ++YA +G      +I  K ND G
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKG 599


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 212/608 (34%), Positives = 339/608 (55%), Gaps = 38/608 (6%)

Query: 224 PSTISFVNVFPALSSL-------GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           PS  SF   F A S          D  +A  ++GL V  G  Y  D FVAS+   +Y +L
Sbjct: 105 PSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAG--YAADTFVASALAKLYFKL 162

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
              D ARK+FD     +T +WNT++ G   +    EA+E FV++++   +  D  T  S+
Sbjct: 163 SRGDDARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASS 218

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DV 376
           L A ++   + +G+ +H Y +K  +A    V+  ++                      D+
Sbjct: 219 LRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDL 278

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V++N +IS +  NG+ +  + L  E+   G+  +S T+ A++   S   ++ + +  HA+
Sbjct: 279 VAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAF 338

Query: 437 LLRHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           +++  +  + + S  L  +Y +   +++AR IF+     ++   +WNAMI+GY QNGL E
Sbjct: 339 VVKARLDADALVSTALTTLYCRLNDMESARSIFDAML--EKTMESWNAMISGYAQNGLTE 396

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
            A   F+ M E NV PN +TI+S L AC  +G + LGK +H    +  L+ NV+V T+LI
Sbjct: 397 MAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALI 456

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMY+K G I  A ++F ++  KN V++  MI GYG HG    AL L++ M    I P + 
Sbjct: 457 DMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSS 516

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF++V+ ACS+ GLVDEG ++F +M  EY+I P  EH  C+ D+LGR GK+ EA E + E
Sbjct: 517 TFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISE 576

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
             +      +WG+LLG+C +H +S+LA++ ++KL E+D+ N+  GY+VLLSN+Y  + ++
Sbjct: 577 FPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENA--GYYVLLSNLYTSKKHY 634

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
                VR+E + R L K  GC+ I++G   + F + D  HPQS  IY  LERL  +M  A
Sbjct: 635 SEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEA 694

Query: 796 GNKTIQNS 803
           G + +  +
Sbjct: 695 GYQPVTEA 702



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 223/487 (45%), Gaps = 55/487 (11%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           +H LS          + S L+K+  +  R   AR++FD++  P T++WNT++ G   +  
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSE- 194

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             EA +      +  P    D+ T +S L+A AE  ++ +G+ VH + ++C       V 
Sbjct: 195 ALEAFVRMVDAGRVRP----DSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV 250

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
             L+++YS C              ++D +++     +FD M   ++VA+N ++S Y    
Sbjct: 251 TGLMSLYSKC-------------GDMDSAQF-----LFDRMDNPDLVAYNALISGYSVNG 292

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
               +V  F+ +   G RP++ + V V P  S  G    A  ++  +VK  +    D  V
Sbjct: 293 MVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVK--ARLDADALV 350

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           +++   +Y  L   + AR IFD  LE+  E WN MI GY QN     A+ LF  + EL+ 
Sbjct: 351 STALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELN- 409

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------ 373
           +  + +T  S LSA + L  L LG+ +H  I K  + L V V+ A+I+            
Sbjct: 410 VQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEAR 469

Query: 374 --------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                   ++VVSWN MIS +  +G   E L L  +M     +  S T  +++ A S+  
Sbjct: 470 SIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGG 529

Query: 426 NQDVGKQ-----THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
             D G++     T+ Y +  GI      + ++D+  ++G +  A ++  +          
Sbjct: 530 LVDEGQKVFRVMTNEYRITPGIEH---CTCMVDLLGRAGKLNEALELISEFPQSAIGPGV 586

Query: 481 WNAMIAG 487
           W A++  
Sbjct: 587 WGALLGA 593


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 219/713 (30%), Positives = 381/713 (53%), Gaps = 49/713 (6%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L++C ++++L  GK +H H ++C           L   + T L++ D     L  + + 
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKC-----------LHRTHETNLTNFDVPFEKLVDLYIA 63

Query: 173 YSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
            S+  +   VFD M  R +NVV WN ++  Y     Y EA+  +  ML  GI P+  +F 
Sbjct: 64  CSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFP 123

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V  A S+L +      ++  + +L  E  ++++V+++ +  YA+ GC D A+++FD   
Sbjct: 124 FVLKACSALKEASEGREIHCDIKRLRLE--SNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181

Query: 291 ERNTEVWNTMIGGY-VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           +R+   WN+MI G+ +      E   L VQ+   +++  +  T +  L AV+Q+  L  G
Sbjct: 182 KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ--NDVSPNSSTIVGVLPAVAQVNSLRHG 239

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQ 388
           +++H + ++      V+V   +++                     ++ V+W+ M+ A+V 
Sbjct: 240 KEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVV 299

Query: 389 NGLDDEGLMLVYEM---QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
                E L L  ++   +    ++ +VT+  ++   +NL +   G   H Y ++ G   +
Sbjct: 300 CDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLD 359

Query: 446 GM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            M  + L+ MYAK G+I  A + F + D   RD  ++ A+I+GY QNG  EE    F +M
Sbjct: 360 LMVGNTLLSMYAKCGIINGAMRFFNEMDL--RDAVSFTAIISGYVQNGNSEEGLRMFLEM 417

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               + P   T+ASVLPAC  +  +  G   H ++I      +  +  +LIDMY+K G I
Sbjct: 418 QLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKI 477

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + A  VF ++ ++  V++ TMI+ YG HG+   AL LF +M+  G++PD +TF+ ++SAC
Sbjct: 478 DTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISAC 537

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++GLV EG   F+ M Q++ I P  EHY C+ D+L R G   E + F++++  E +V  
Sbjct: 538 SHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDV-R 596

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +WG+LL +CR++ + EL E V+KK+ ++   ++  G  VLLSN+Y+  G W++  +VR  
Sbjct: 597 VWGALLSACRVYKNVELGEGVSKKIQKLGPEST--GNFVLLSNMYSAVGRWDDAAQVRFT 654

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKD-QEHPQSHKIYEMLERLAMEMRNAG 796
            +E+G  K  GCSWI++ G V+ F     + HPQ  +I   L+ L +EM+  G
Sbjct: 655 QKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLG 707



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 201/731 (27%), Positives = 332/731 (45%), Gaps = 108/731 (14%)

Query: 57  LARQLFDSI-TRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           +AR +FD +  RP  V+ WN +I  +  N    EAI LY +M       + + +T+  VL
Sbjct: 69  IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYG--ITPNRFTFPFVL 126

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC+  +    G+ +HC   R     + +V  +L++ Y+ C    DA+            
Sbjct: 127 KACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAK------------ 174

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VFD M +R+VVAWN+++S +   E   + V +  + ++  + P++ + V V P
Sbjct: 175 ------EVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLP 228

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERN 293
           A++ +   +    ++G  V+ G  +V D+ V +  + +Y +  C D+AR+IFD   + +N
Sbjct: 229 AVAQVNSLRHGKEIHGFCVRRG--FVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKN 286

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLEL--DEIVFDDVTFLSALSAVSQLQELDLGQQ 351
              W+ M+G YV  +   EA+ELF Q+L L  D IV   VT  + +   + L +L  G  
Sbjct: 287 EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTC 346

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           LH Y IK+   L ++V N ++                     RD VS+  +IS +VQNG 
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGN 406

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESY 450
            +EGL +  EMQ  G   +  T+ ++L A ++L     G  +H Y +  G   + M  + 
Sbjct: 407 SEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNA 466

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMYAK G I TAR++F++     R   +WN MI  Y  +G+  EA + F  M    + 
Sbjct: 467 LIDMYAKCGKIDTARKVFDRMHK--RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLK 524

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ VT   ++ AC+  G +  GK                               N     
Sbjct: 525 PDDVTFICLISACSHSGLVAEGKYW----------------------------FNAMTQD 556

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  IP      Y  M+    + G+ +   S    M    +EPD   + A+LSAC     V
Sbjct: 557 FGIIPRMEH--YACMVDLLSRAGLFKEVHSFIEKMP---LEPDVRVWGALLSACRVYKNV 611

Query: 631 DEGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG-------NV 682
           + G  +   +Q   K+ P ST ++  +++M   VG+  +A +      E+G       + 
Sbjct: 612 ELGEGVSKKIQ---KLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSW 668

Query: 683 LEIWG---SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
           +EI G   + LG      H +L + ++ KL E+       GY    S ++ +        
Sbjct: 669 IEISGVVHTFLGG-GYRSHPQLTQ-ISNKLDELLVEMKRLGYQAESSYVFQD-------- 718

Query: 740 KVRKEMRERGL 750
            V +E +ER L
Sbjct: 719 -VEEEEKERVL 728



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   AR++FD + +   V WNT+II +  + +  EA+LL+  M+  S     D+ T+  
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQ--SEGLKPDDVTFIC 532

Query: 113 VLKACAETRNLRIGK 127
           ++ AC+ +  +  GK
Sbjct: 533 LISACSHSGLVAEGK 547


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 241/767 (31%), Positives = 372/767 (48%), Gaps = 85/767 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C    P  A +LF     P    W  II          EA+  Y +M++       DN+ 
Sbjct: 101 CGASEP--ATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDG--LPPDNFV 156

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
             +VLKAC   + +R GK VH   ++        +V  SL++MY  C +  DA       
Sbjct: 157 LPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAG------ 210

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       KVFD M  RN V WN++V  Y +     EA+R FR M   G+  + ++
Sbjct: 211 ------------KVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVA 258

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
               F A ++          +GL V  G E  N L   SS +  Y ++G  + A  +F N
Sbjct: 259 LSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVL--GSSIMNFYFKVGLIEEAEVVFRN 316

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              ++   WN ++ GY Q     +A+E+   V+  + + FD VT  + L+  +  ++L L
Sbjct: 317 MAVKDVVTWNLVVAGYAQFGMVEKALEMCC-VMREEGLRFDCVTLSALLAVAADTRDLVL 375

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G + HAY +KN     V+V + +I+                    +D+V WNTM++A  +
Sbjct: 376 GMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAE 435

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            GL  E L L ++MQ +    + V+  +L+                              
Sbjct: 436 QGLSGEALKLFFQMQLESVPPNVVSWNSLIFG---------------------------- 467

Query: 449 SYLIDMYAKSGLIKTARQIF-EKNDSGDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
                 + K+G +  AR +F E   SG   +  TW  M++G  QNG    A + FR+M +
Sbjct: 468 ------FFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQD 521

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN ++I S L  C  M  ++ G+ +HG+ +R  L Q++ + TS++DMY+K G ++ 
Sbjct: 522 VGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDG 581

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF     K    Y  MI  Y  HG +  AL LF+ M+  GI PD IT  +VLSACS+
Sbjct: 582 AKCVFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSH 641

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            GL+ EG+++F  M  E +++PS EHY C+  +L   G++ EA   +  +    +   I 
Sbjct: 642 GGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDA-HIL 700

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
           GSLL +C  +   ELA+ +AK LL++D  NS  G +V LSN+YA  G W+ V  +R  M+
Sbjct: 701 GSLLTACGQNNDIELADYIAKWLLKLDPDNS--GNYVALSNVYAAVGKWDKVSNLRGLMK 758

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           E+GLRK  GCSWI+VG  ++ F + D+ HP++ +IY  L+ L  EM 
Sbjct: 759 EKGLRKIPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEMH 805



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 128/562 (22%), Positives = 256/562 (45%), Gaps = 76/562 (13%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           ++K G  +  + FV S  + +YA+ G  + A ++F +    N   W  +IG + +     
Sbjct: 77  VIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCE 136

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALP 364
           EA+  +++ ++ D +  D+    + L A   L+ +  G+ +HA+++K        +VA  
Sbjct: 137 EALFGYIK-MQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATS 195

Query: 365 VI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++              V + + ER+ V+WN+M+  + QNG++ E + +  EM+ QG  + 
Sbjct: 196 LVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVT 255

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFE 469
            V ++   +A +N      G+Q H   +  G+  +  + S +++ Y K GLI+ A  +F 
Sbjct: 256 LVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFR 315

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
             +   +D  TWN ++AGY Q G++E+A      M E  +  + VT++++L       ++
Sbjct: 316 --NMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDL 373

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
            LG + H + ++   + +V V + +IDMY+K G ++ A  VF+ + +K+ V + TM+   
Sbjct: 374 VLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAAC 433

Query: 590 GQHGMSERALSLFRSMK-----------------------------------GCGIEPDA 614
            + G+S  AL LF  M+                                     G+ P+ 
Sbjct: 434 AEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNL 493

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC-----CVADMLGRVGKVVEA 669
           IT+  ++S     G     + +F  M Q+  I+P++         C +  L + G+ +  
Sbjct: 494 ITWTTMMSGLVQNGFGSGAMMVFREM-QDVGIRPNSMSITSALSGCTSMALLKHGRAIHG 552

Query: 670 YEFVKELGEEGNVLEIWGSLLGSC-RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           Y   ++L +  +++     +   C  L G        AK + +M +   +  Y+ ++S  
Sbjct: 553 YVMRRDLSQSIHIITSIMDMYAKCGSLDG--------AKCVFKMCSTKELYVYNAMIS-A 603

Query: 729 YAEEGNWENVDKVRKEMRERGL 750
           YA  G       + K+M + G+
Sbjct: 604 YASHGQAREALVLFKQMEKEGI 625



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 8/256 (3%)

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY--LLDQN 547
           ++G + EA  +  QM   N+        ++L  C     + L  QLH   I+       N
Sbjct: 28  KHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALN 87

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
            FV + L+ +Y+K G    A  +F   P  N  ++  +I  + + G  E AL  +  M+ 
Sbjct: 88  DFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQ 147

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
            G+ PD      VL AC     V  G  +   + +   ++        + DM G+ G V 
Sbjct: 148 DGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVE 207

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSN 727
           +A +   E+ E  +V   W S++ +   +G ++ A  V +++       ++    V LS 
Sbjct: 208 DAGKVFDEMSERNDV--TWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTL----VALSG 261

Query: 728 IYAEEGNWENVDKVRK 743
            +    N E V + R+
Sbjct: 262 FFTACANSEAVGEGRQ 277


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 228/768 (29%), Positives = 397/768 (51%), Gaps = 75/768 (9%)

Query: 58  ARQLFDSITRP-----TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           A ++FD + +         IWN+II G+       E ++ + +M+ S             
Sbjct: 107 AVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS------------- 153

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
                      + GK +H + +R   N   F+  +L++ Y  C    +A  +  K  +  
Sbjct: 154 ---------GYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKD-- 202

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                          R N+VAWN ++  + +   +  ++  + +     ++  + SF   
Sbjct: 203 ---------------RSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCT 247

Query: 233 FPALSSLGDYKS-ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
             A    G++ S    V+   +K+G E  +D +V +S + MY +    + A K+F+   +
Sbjct: 248 LSACGQ-GEFVSFGKQVHCDAIKVGFE--DDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           +  E+WN +I  YV N +  +A+ ++ Q ++L  ++ D  T L+ L++ S     DLG+ 
Sbjct: 305 KEIELWNALISAYVGNGYAYDALRIYKQ-MKLCTVLSDSFTILNVLTSSSMAGLYDLGRL 363

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +H  I+K  +   + + +A++                    ERDVV+W ++IS F QN  
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRK 423

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
             E L     M+      DS  + +++SA + L   D+G   H ++++ G+  +  + S 
Sbjct: 424 YKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASS 483

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY+K G  + A  IF  +D   ++   WN++I+ Y +N L + +   F Q+L +++ 
Sbjct: 484 LLDMYSKFGFPERAGNIF--SDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLY 541

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ V+  SVL A + +  +  GK +HG+ +R  +  ++ V  +LIDMY K G++ YA ++
Sbjct: 542 PDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHI 601

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F +I EKN V + +MI GYG HG   +A+ LF  M+  GI+PD +TF+++LS+C+++GL+
Sbjct: 602 FERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLI 661

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EGL +F++M+ ++ I+P  EHY  + D+ GR G + +AY FVK +  E +   IW SLL
Sbjct: 662 EEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPD-RSIWLSLL 720

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            SC++H + EL E+VA KLL M+   S    +V L N+Y E   W+    +R  M+E+GL
Sbjct: 721 CSCKIHLNLELGEMVANKLLNMEP--SKGSNYVQLLNLYGEAELWDRTANLRASMKEKGL 778

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +K  GCSWI+V   V+ F S D   P + +IY+ L  L   M   G K
Sbjct: 779 KKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKKGAK 826



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 274/548 (50%), Gaps = 52/548 (9%)

Query: 53  GRPHLARQLFDSIT-RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           GRP  AR LF  +  R   V WN +I GF  N L +E  L Y  + K+       + +++
Sbjct: 188 GRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGL-WENSLEYYLLAKTENVKVVSS-SFT 245

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
             L AC +   +  GK VHC  I+       +V+ SLL MY  C     AE         
Sbjct: 246 CTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAE--------- 296

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                    KVF+ +  + +  WN ++S YV      +A+R ++ M    +   + + +N
Sbjct: 297 ---------KVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILN 347

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  + S  G Y    +++  +VK   +  + + + S+ + MY++ G  ++A  IF    E
Sbjct: 348 VLTSSSMAGLYDLGRLIHTEIVKRPLQ--SSITIQSALLTMYSKFGDSNYANSIFSTMKE 405

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   W ++I G+ QN    EA++ F + +E D +  D     S +SA + L+++DLG  
Sbjct: 406 RDVVAWGSVISGFCQNRKYKEALDFF-RAMEADLVKPDSDIMASIISACTGLEKVDLGCT 464

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H ++IK+ + L V V +++++                    +++V+WN++IS + +N L
Sbjct: 465 IHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNL 524

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
            D  + L  ++ +     DSV+ T++L+A S++     GK  H YL+R  I F+  +E+ 
Sbjct: 525 PDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENT 584

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMY K GL+K A+ IFE+    +++   WN+MI GY  +G   +A   F +M    + 
Sbjct: 585 LIDMYIKCGLLKYAQHIFER--ISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIK 642

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGF---SIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           P+ VT  S+L +CN  G IE G  LH F    +++ ++  +    +++D+Y ++G +  A
Sbjct: 643 PDDVTFLSLLSSCNHSGLIEEG--LHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDA 700

Query: 568 ANVFAKIP 575
            +    +P
Sbjct: 701 YSFVKNMP 708



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 174/642 (27%), Positives = 303/642 (47%), Gaps = 78/642 (12%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA+ LY+   KS  YT+   +TY S+LKACA   NL+ GK +H   I    +  +++ +S
Sbjct: 39  EALKLYT---KSPVYTT--RFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSS 93

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR-----NVVAWNTIVSWYV 202
           L+N+Y  C +  DA                   KVFD + +      +V  WN+I+  Y 
Sbjct: 94  LINIYVKCGTFTDA------------------VKVFDQLPKSGVSVDDVTIWNSIIDGYF 135

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +  +  E + QF  M   G                    YK    ++  +V+    +  D
Sbjct: 136 RFGQLEEGMVQFGRMQSSG--------------------YKEGKQIHSYIVRNMLNF--D 173

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLER-NTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
            F+ ++ I  Y + G    AR +F    +R N   WN MIGG+ +N     ++E ++ + 
Sbjct: 174 PFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYL-LA 232

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI-------------- 366
           + + +     +F   LSA  Q + +  G+Q+H   IK  F   P +              
Sbjct: 233 KTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMI 292

Query: 367 -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                V N V ++++  WN +ISA+V NG   + L +  +M+    + DS T+  +L+++
Sbjct: 293 ESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSS 352

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S     D+G+  H  +++  +     ++S L+ MY+K G    A  IF      +RD   
Sbjct: 353 SMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMK--ERDVVA 410

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           W ++I+G+ QN   +EA   FR M    V P+   +AS++ AC  +  ++LG  +HGF I
Sbjct: 411 WGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVI 470

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           +  L  +VFV +SL+DMYSK G    A N+F+ +P KN V + ++I  Y ++ + + +++
Sbjct: 471 KSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSIN 530

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  +    + PD+++F +VL+A S    + +G  +   + + + I    +    + DM 
Sbjct: 531 LFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW-IPFDLQVENTLIDMY 589

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            + G +  A    + + E+   L  W S++G    HG    A
Sbjct: 590 IKCGLLKYAQHIFERISEKN--LVAWNSMIGGYGSHGECSKA 629



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 161/340 (47%), Gaps = 26/340 (7%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           IH+     P   + TI+S L  +  + G  + A  +F ++     V W ++I GF C N 
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGF-CQNR 422

Query: 86  PY-EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
            Y EA+  +  M+  +     D+   +S++ AC     + +G  +H   I+       FV
Sbjct: 423 KYKEALDFFRAME--ADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFV 480

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            +SLL+MYS                   +   +    +F  M  +N+VAWN+I+S Y + 
Sbjct: 481 ASSLLDMYS------------------KFGFPERAGNIFSDMPLKNLVAWNSIISCYCRN 522

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
                ++  F  +LR  + P ++SF +V  A+SS+        V+G LV+L   +  DL 
Sbjct: 523 NLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPF--DLQ 580

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V ++ I MY + G   +A+ IF+   E+N   WN+MIGGY  +    +AIELF + +   
Sbjct: 581 VENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDE-MRSS 639

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            I  DDVTFLS LS+ +    ++ G  L   +   F   P
Sbjct: 640 GIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEP 679



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 24/251 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  A  +F  +     V WN+II  +  NNLP  +I L+SQ+ ++  Y   D+ +++S
Sbjct: 492 GFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYP--DSVSFTS 549

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL A +    L  GK+VH + +R +      V N+L++MY  C          LKY +  
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGL--------LKYAQ-- 599

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F+ +  +N+VAWN+++  Y       +A+  F  M   GI+P  ++F+++
Sbjct: 600 --------HIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSL 651

Query: 233 FPALSSLGDYKSADVVYGLL-VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-L 290
             + +  G  +    ++ ++ +K G E   + +V  + + +Y   GC   A     N  +
Sbjct: 652 LSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYV--NIVDLYGRAGCLGDAYSFVKNMPV 709

Query: 291 ERNTEVWNTMI 301
           E +  +W +++
Sbjct: 710 EPDRSIWLSLL 720


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 216/741 (29%), Positives = 391/741 (52%), Gaps = 52/741 (7%)

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
           S   P T  +N II          + +L YS M  +   T  D +T+ S++KAC      
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTD--TPPDAHTFPSLVKACTSLDLF 64

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
             G + H   I    +   ++  SL+N YS    +  A                   KVF
Sbjct: 65  SHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSAR------------------KVF 106

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
           DTM  RNVV W T++  Y +   +  A   + +M R GI+PS+++ + +   LS + +  
Sbjct: 107 DTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGL---LSGVLELV 163

Query: 244 SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
               ++  +++ G  + +D+ +A+S + +Y + G  + A+ +F+    R+   WN+++ G
Sbjct: 164 HLQCLHACVIQYG--FGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSG 221

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
           Y Q  +  E ++L ++ ++ D I  D  TF S +SA +   +L +G+ +H +I++     
Sbjct: 222 YAQLGNIREVLQLLIR-MKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQ 280

Query: 359 -NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            + +   +I              +   ++ +DV+SW  MIS  VQN   D  + +   M 
Sbjct: 281 DSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML 340

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
           K   M  + T+ ++L+A + L +  +G   H Y+LR  I  +   ++ L+ MYAK G ++
Sbjct: 341 KSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLE 400

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            +  +F++     RD  +WNA+++G+ QNG L +A + F +M +    P+ +T+ S+L A
Sbjct: 401 QSCSVFDRMSR--RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +G +  GK +H F  +  L   + + T+L+DMYSK G +  A   F ++P+++ V++
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           +++I GYG HG  E AL ++      GI+P+ + ++++LSACS+ GLVD+GL  F  M +
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ I+P  EH  C+ D+L R G+V EAY F K +  + + +++ G LL +CR  G+ EL 
Sbjct: 579 DFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPS-MDVLGILLDACRTTGNVELG 637

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           ++VA++++ +   N+  G +V L++ YA    W+ V +V  +M+   L+K  G S+I++ 
Sbjct: 638 DIVAREIVILKPANA--GNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELH 695

Query: 763 GYVNRFASKDQEHPQSHKIYE 783
           G +  F +    HPQ  +I +
Sbjct: 696 GTITTFFTDHSSHPQFEEIID 716



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/560 (24%), Positives = 262/560 (46%), Gaps = 56/560 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR++FD++     V W T+I  +        A  +Y+ M++     S  + T   
Sbjct: 97  GHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPS--SVTMLG 154

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L    E  +L   + +H   I+        + NS+LN+Y  C    DA+          
Sbjct: 155 LLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQ---------- 201

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F+ M  R+V++WN++VS Y +     E ++    M   GI P   +F ++
Sbjct: 202 --------ALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSL 253

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +         +V+G +++ G E   D  + +S I MY + G  + A +IF+  + +
Sbjct: 254 VSAAAMQSKLGVGKMVHGHILRAGLE--QDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  MI G VQN+    A+ +F ++L+   ++    T  S L+A ++L    LG  +
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSV 370

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H YI++  + L +   N+++                     RD+VSWN ++S   QNG  
Sbjct: 371 HGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG----ME 448
            + L+L  EM+K     DS+TV +LL A +++     GK  H ++ +  +   G    ++
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCL---GPCILID 487

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+DMY+K G + +A++ F++     +D  +W+++IAGY  +G  E A   +   L   
Sbjct: 488 TALVDMYSKCGDLGSAQKCFDRMP--QQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTG 545

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           + PN V   S+L AC+  G ++ G    H  +  + ++  +     ++D+ S++G +  A
Sbjct: 546 IQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605

Query: 568 ANVFAKIPEKNSVTYTTMIL 587
            + + ++  K S+    ++L
Sbjct: 606 YSFYKRMFPKPSMDVLGILL 625



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 221/509 (43%), Gaps = 77/509 (15%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ GR   A+ LF+ +     + WN+++ G+       E + L  +MK      
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDG--I 243

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D  T+ S++ A A    L +GK VH H +R        +  SL+ MY  C        
Sbjct: 244 EPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC-------- 295

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                        +   ++F+ M  ++V++W  ++S  V+ +    AV  FR ML+  + 
Sbjct: 296 ----------GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVM 345

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PST +  +V  A + LG +     V+G +++       D+   +S + MYA+ G  + + 
Sbjct: 346 PSTATIASVLAACAELGSFPLGTSVHGYILR--QRIKLDIPSQNSLVTMYAKCGHLEQSC 403

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD    R+   WN ++ G+ QN H  +A+ LF ++ +  +   D +T +S L A + +
Sbjct: 404 SVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP-DSITVVSLLQACASI 462

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             L  G+ +H ++ K+ +   +++  A++                    ++D+VSW+++I
Sbjct: 463 GALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSII 522

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + +  +G  +  L +  +    G   + V   ++LSA S           H  L+  G+ 
Sbjct: 523 AGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS-----------HNGLVDQGLS 571

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           F    S   D   +  L   A                   ++   ++ G +EEA+  +++
Sbjct: 572 F--FHSMTKDFGIEPRLEHRA------------------CIVDLLSRAGRVEEAYSFYKR 611

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELG 532
           M      P++  +  +L AC   GN+ELG
Sbjct: 612 MFP---KPSMDVLGILLDACRTTGNVELG 637



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           KL  P+  S ++   + G    +  +FD ++R   V WN I+ G   N    +A+LL+++
Sbjct: 380 KLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNE 439

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M+K+      D+ T  S+L+ACA    L  GK +H    +    P   +  +L++MYS C
Sbjct: 440 MRKARQRP--DSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKC 497

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                A+                  K FD M ++++V+W++I++ Y    +   A+R + 
Sbjct: 498 GDLGSAQ------------------KCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYS 539

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
             L  GI+P+ + ++++  A S  G
Sbjct: 540 DFLHTGIQPNHVIYLSILSACSHNG 564


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 244/783 (31%), Positives = 393/783 (50%), Gaps = 58/783 (7%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR++FD    P  V W++++  +  N LP EA+  +  M+       C+ +    VL
Sbjct: 53  PGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARG--VRCNEFALPIVL 110

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K CA    L  G  VH   +    +   FV N+L+ MY            G  +V     
Sbjct: 111 K-CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYG-----------GFGFV----- 151

Query: 175 KYDLVCKVFD-TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
             D   +VFD   R RN V+WN ++S +VK +R  +AV  F  M+  G+RP+   F  V 
Sbjct: 152 --DEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVV 209

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +   D ++   V+ ++V+ G  Y  D+F A++ + MY++LG    A  +F    + +
Sbjct: 210 NACTGSRDLEAGRKVHAMVVRTG--YDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTD 267

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG--QQ 351
              WN  I G V + H   A+EL +Q ++   +V +  T  S L A +          +Q
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQ-MKSSGLVPNVFTLSSILKACAGAGAGAFALGRQ 326

Query: 352 LHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGL 391
           +H ++IK      +++ + ++              V   +  +D++ WN +IS     G 
Sbjct: 327 IHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGC 386

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
             E L L   M+K+G  I+  T+ A+L + ++L       Q HA   + G   +  + + 
Sbjct: 387 HGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNG 446

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LID Y K   ++ A ++FE++ S +     + +MI   +Q    E+A   F +ML   + 
Sbjct: 447 LIDSYWKCNCLRYANKVFEEHSSDN--IIAFTSMITALSQCDHGEDAIKLFMEMLRKGLE 504

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+   ++S+L AC  +   E GKQ+H   I+     +VF G +L+  Y+K G I  A   
Sbjct: 505 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLA 564

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F+ +P+K  V+++ MI G  QHG  +RAL +FR M    I P+ IT  +VL AC++AGLV
Sbjct: 565 FSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLV 624

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           DE    F  M++ + I  + EHY C+ D+LGR GK+ +A E V  +  E N   +WG+LL
Sbjct: 625 DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANA-AVWGALL 683

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            + R+H   EL ++ A+KL  ++   S  G HVLL+N YA  G W+ V KVRK M++  +
Sbjct: 684 AASRVHRDPELGKLAAEKLFVLEPEKS--GTHVLLANTYASAGMWDEVAKVRKLMKDSKV 741

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG---NKTIQNSNVDA 807
           +KE   SW+++   V+ F   D+ HP++  IY  LE L   M  AG   N  +   +VD 
Sbjct: 742 KKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDK 801

Query: 808 TPR 810
           + +
Sbjct: 802 SEK 804



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 113/464 (24%), Positives = 205/464 (44%), Gaps = 58/464 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H+A  +F  + +   V WN  I G V +     A+ L  QMK S    +   +T SS
Sbjct: 251 GDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV--FTLSS 308

Query: 113 VLK--ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +LK  A A      +G+ +H   I+  ++   ++  +L++MY+             KY  
Sbjct: 309 ILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYA-------------KYGL 355

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           +D ++     KVF+ + R++++ WN ++S       + E++  F  M + G   +  +  
Sbjct: 356 LDDAR-----KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLA 410

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V  + +SL        V+ L  K+G  +++D  V +  I  Y +  C  +A K+F+   
Sbjct: 411 AVLKSTASLEAISDTTQVHALAEKIG--FLSDSHVVNGLIDSYWKCNCLRYANKVFEEHS 468

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             N   + +MI    Q +H  +AI+LF+++L    +  D     S L+A + L   + G+
Sbjct: 469 SDNIIAFTSMITALSQCDHGEDAIKLFMEMLR-KGLEPDPFVLSSLLNACASLSAYEQGK 527

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           Q+HA++IK      V   NA++                    ++ VVSW+ MI    Q+G
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-HFEGME 448
                L +   M  +    + +T+T++L A ++    D  K   + +    GI   E   
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHY 647

Query: 449 SYLIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIAG 487
           S +ID+  ++G +  A ++     FE N       A W A++A 
Sbjct: 648 SCMIDLLGRAGKLDDAMELVNSMPFEAN------AAVWGALLAA 685



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 157/316 (49%), Gaps = 15/316 (4%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           +++ LL+  +  ++  +G   HA+LL+ G+      ++L+  Y+K  L  +AR++F+  +
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGL-LHAFRNHLLSFYSKCRLPGSARRVFD--E 62

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           + D    +W++++  Y+ N L  EA  AFR M    V  N   +  VL  C P  +  LG
Sbjct: 63  TPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLG 119

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQ 591
            Q+H  ++   L  ++FV  +L+ MY   G ++ A  VF +   ++N+V++  M+  + +
Sbjct: 120 VQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVK 179

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPST 650
           +     A+ LF  M   G+ P+   F  V++AC+ +  ++ G ++  + ++  Y     T
Sbjct: 180 NDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT 239

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
            +   + DM  ++G +  A     ++ +   V   W + +  C LHGH + A    + LL
Sbjct: 240 AN--ALVDMYSKLGDIHMAALVFGKVPKTDVV--SWNAFISGCVLHGHDQHA---LELLL 292

Query: 711 EMDTRNSMPGYHVLLS 726
           +M +   +P    L S
Sbjct: 293 QMKSSGLVPNVFTLSS 308


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 218/675 (32%), Positives = 358/675 (53%), Gaps = 74/675 (10%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEA------------------------------ 210
           K+FD M +++  +WNT++S YV   R VEA                              
Sbjct: 86  KLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVE 145

Query: 211 -VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
               FR M   G + S  +  +V    SSLG  ++ ++++G +VK G E   ++FV +  
Sbjct: 146 AFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFE--GNVFVVTGL 203

Query: 270 IFMYAELGCFDFARKIFDNCLE---RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           + MYA+  C   A  +F   LE   +N  +W  M+ GY QN    +A+E F + +    +
Sbjct: 204 VDMYAKCKCVSEAEFLFKG-LEFDRKNHVLWTAMVTGYAQNGDGYKAVEFF-RYMHAQGV 261

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             +  TF + L+A S +     G+Q+H +I+K+     V V +A+++             
Sbjct: 262 ECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKN 321

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                   DVVSWN+++  FV++GL++E L L   M  +   ID  T  ++L+       
Sbjct: 322 MLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV---- 377

Query: 427 QDVG----KQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
             VG    K  H  +++ G  +++ + + L+DMYAK+G +  A  +FEK    ++D  +W
Sbjct: 378 --VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEK--MLEKDVISW 433

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            +++ GY QN   EE+   F  M    V P+   +AS+L AC  +  +E GKQ+H   I+
Sbjct: 434 TSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIK 493

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             L  +  V  SL+ MY+K G ++ A  +F  +  K+ +T+T +I+GY Q+G    +L  
Sbjct: 494 SGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKF 553

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           + +M   G  PD ITF+ +L ACS+AGLVDEG + F  M + Y I+P  EHY C+ D+ G
Sbjct: 554 YDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFG 613

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R GK+ EA + + ++  + +   +W SLL +CR+H + ELAE  A  L E++  N+MP  
Sbjct: 614 RSGKLDEAKQLLDQMDVKPDA-TVWKSLLSACRVHENLELAERAATNLFELEPMNAMP-- 670

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +V+LSN+Y+    W +V K+RK M+ +G+ KE GCSW+++   VN F S D+ HP+  +I
Sbjct: 671 YVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEI 730

Query: 782 YEMLERLAMEMRNAG 796
           Y  ++ + + ++ AG
Sbjct: 731 YTKIDEIILRIKEAG 745



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 159/625 (25%), Positives = 279/625 (44%), Gaps = 83/625 (13%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+     L   +P+    +  + +S     GR   AR+LFD  +  +++ W++II G+  
Sbjct: 80  QVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCK 139

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
                EA  L+  M+      S   +T  SVL+ C+    ++ G+ +H   ++     + 
Sbjct: 140 FGCKVEAFDLFRSMRLEGWKAS--QFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNV 197

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV   L++MY+ C    +AE +  K +E D               R+N V W  +V+ Y 
Sbjct: 198 FVVTGLVDMYAKCKCVSEAEFL-FKGLEFD---------------RKNHVLWTAMVTGYA 241

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     +AV  FR M   G+  +  +F  +  A SS+      + V+G +VK G  + ++
Sbjct: 242 QNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG--FGSN 299

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           ++V S+ + MYA+ G    A+ + +   + +   WN+++ G+V++    EA+ LF + + 
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF-KNMH 358

Query: 323 LDEIVFDDVTFLSALSA--VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
              +  DD TF S L+   V  +      + +H  IIK       +V NA++        
Sbjct: 359 GRNMKIDDYTFPSVLNCCVVGSINP----KSVHGLIIKTGFENYKLVSNALVDMYAKTGD 414

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                       E+DV+SW ++++ + QN   +E L +  +M+  G   D   V ++LSA
Sbjct: 415 MDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSA 474

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            + L   + GKQ H   ++ G+ + + + + L+ MYAK G +  A  IF       +D  
Sbjct: 475 CAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV--KDVI 532

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           TW A+I GY QNG    +   +  M+     P+ +T   +L AC+  G ++ G+      
Sbjct: 533 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGR------ 586

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            +Y    N   G        K G            PE     Y  MI  +G+ G  + A 
Sbjct: 587 -KYFQQMNKVYGI-------KPG------------PEH----YACMIDLFGRSGKLDEAK 622

Query: 600 SLFRSMKGCGIEPDAITFVAVLSAC 624
            L   M    ++PDA  + ++LSAC
Sbjct: 623 QLLDQMD---VKPDATVWKSLLSAC 644



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 213/463 (46%), Gaps = 50/463 (10%)

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           R   V+W  ++ G+  N   Y+A+  +  M        C+ YT+ ++L AC+       G
Sbjct: 227 RKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG--VECNQYTFPTILTACSSVLARCFG 284

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           + VH   ++     + +V ++L++MY+ C    +A+                   + +TM
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAK------------------NMLETM 326

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
              +VV+WN+++  +V+     EA+R F+ M    ++    +F +V      +G      
Sbjct: 327 EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNC-CVVGSINPKS 385

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            V+GL++K G E  N   V+++ + MYA+ G  D A  +F+  LE++   W +++ GY Q
Sbjct: 386 -VHGLIIKTGFE--NYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQ 442

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           NN   E++++F   + +  +  D     S LSA ++L  L+ G+Q+H   IK+ +     
Sbjct: 443 NNSHEESLKIFCD-MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS 501

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V N+++                     +DV++W  +I  + QNG     L     M   G
Sbjct: 502 VYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSG 561

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKT 463
              D +T   LL A S+    D G++    + + +GI   G E Y  +ID++ +SG +  
Sbjct: 562 TRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIK-PGPEHYACMIDLFGRSGKLDE 620

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           A+Q+ ++ D    D   W ++++    +  LE A  A   + E
Sbjct: 621 AKQLLDQMDV-KPDATVWKSLLSACRVHENLELAERAATNLFE 662



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 165/385 (42%), Gaps = 46/385 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ + +++     V WN++++GFV + L  EA+ L+  M   +     D+YT+ SVL  C
Sbjct: 319 AKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRN--MKIDDYTFPSVLNCC 376

Query: 118 AETRNLRIG----KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
                  +G    K+VH   I+      + V N+L++MY+                    
Sbjct: 377 V------VGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKT------------------ 412

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
              D    VF+ M  ++V++W ++V+ Y +   + E+++ F  M   G+ P      ++ 
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A + L   +    V+   +K G  +   ++  +S + MYA+ GC D A  IF +   ++
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQSVY--NSLVAMYAKCGCLDDADAIFVSMQVKD 530

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  +I GY QN     +++ F   +       D +TF+  L A S    +D G++  
Sbjct: 531 VITWTAIIVGYAQNGKGRNSLK-FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYF 589

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
             + K +   P              +  MI  F ++G  DE   L+ +M  +    D+  
Sbjct: 590 QQMNKVYGIKP----------GPEHYACMIDLFGRSGKLDEAKQLLDQMDVKP---DATV 636

Query: 414 VTALLSAASNLRNQDVGKQTHAYLL 438
             +LLSA     N ++ ++    L 
Sbjct: 637 WKSLLSACRVHENLELAERAATNLF 661



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 78/241 (32%)

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI------------------- 586
           ++++    L++  SKSG +N A  +F K+P+K+  ++ TMI                   
Sbjct: 63  ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122

Query: 587 ------------LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
                        GY + G    A  LFRSM+  G +    T  +VL  CS  GL+  G 
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGE 182

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG--SLLGS 692
            I                                 + FV + G EGNV  + G   +   
Sbjct: 183 MI---------------------------------HGFVVKNGFEGNVFVVTGLVDMYAK 209

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI---YAEEGNWENVDKVRKEMRERG 749
           C+    +E       K LE D +N     HVL + +   YA+ G+     +  + M  +G
Sbjct: 210 CKCVSEAEF----LFKGLEFDRKN-----HVLWTAMVTGYAQNGDGYKAVEFFRYMHAQG 260

Query: 750 L 750
           +
Sbjct: 261 V 261


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 243/769 (31%), Positives = 400/769 (52%), Gaps = 51/769 (6%)

Query: 13  PPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTV 71
           P   +     QL Q+H+         T    ++L     Q G    +  +F++   P + 
Sbjct: 6   PLFRSCKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSF 65

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
           +W  +I   V ++   EAILLY +M  +    +  ++ + SVL+ACA   ++ IG  VH 
Sbjct: 66  MWGVLIKCHVWSHAFEEAILLYDKMLCNEAQIT--SFVFPSVLRACAGFGDMFIGAKVHG 123

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             I+C  +   F+  SLL +Y       DA                   KVFD +  R++
Sbjct: 124 RIIKCGFDNDPFIETSLLGLYGELGCLTDAR------------------KVFDDIPVRDL 165

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+W++I+S YV      EA+  FR+++   ++   +  ++V  A S LG  K A  ++G 
Sbjct: 166 VSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGY 225

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           +V+   +    L   +S I MY+       A +IF N   +    W +MI  Y ++    
Sbjct: 226 IVRRRVDTCEAL--DNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFK 283

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL------PV 365
           EA E+FV++LEL ++  + +T +  L + S L  L  G+ +H Y +K  +        PV
Sbjct: 284 EAFEIFVKMLEL-KVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPV 342

Query: 366 I---------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +               VL A+ ER+VVSWNT++S   + GL +E L+L  +MQK+G M+D
Sbjct: 343 LIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLD 402

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK 470
             ++++ +SA  N+ +  +G+Q H Y ++  I  E +++ LI MY++ G   +A  IF  
Sbjct: 403 FFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEFVKNALIGMYSRCGFSDSAYMIF-- 460

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
           ND   +    WN++I+G+ Q+G   EA     QM  + +    V   S + AC  M  +E
Sbjct: 461 NDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLE 520

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK LH   I Y +++++++ T+L DMY+K G +  A  VF  + EK+ V+++ MI GYG
Sbjct: 521 KGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYG 580

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG  + A++ F  M   GI+P+ ITF+ +LSACS++G V++G   FDLM +++ ++PS+
Sbjct: 581 MHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLM-RDFGVEPSS 639

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           EH+ C+ D+L R G V  AY+ +  +    +   + G+LL  CR+H   ++   + K LL
Sbjct: 640 EHFACLVDLLSRAGDVNGAYKIINSMPFPADA-SVLGNLLNGCRIHQRMDMIPEIEKDLL 698

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           ++  R S  G++ LLSNIYAE GNW   +  R  M   G +K  G S I
Sbjct: 699 KI--RTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYSAI 745


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 215/573 (37%), Positives = 321/573 (56%), Gaps = 62/573 (10%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           A  ++ LLV  G   V  +F+++  + +YA LG    +R  FD   +++   WN+MI  Y
Sbjct: 35  AKCLHALLVVAGK--VQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAY 92

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           V N H  EAI  F Q+L + EI  D  TF   L A   L +   G+++H +  K      
Sbjct: 93  VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWN 149

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V  ++I                     RD+ SWN MIS  +QNG   + L ++ EM+ 
Sbjct: 150 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 209

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           +G  ++ VTV ++L                                 +DMYAK GL+ +A
Sbjct: 210 EGIKMNFVTVVSILPV------------------------------FVDMYAKLGLLDSA 239

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPAC 523
            ++FE      +D  +WN +I GY QNGL  EA   ++ M E   + PN  T  S+LPA 
Sbjct: 240 HKVFEIIPV--KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 297

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             +G ++ G ++HG  I+  L  +VFV T LID+Y K G +  A ++F ++P+++SVT+ 
Sbjct: 298 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 357

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            +I  +G HG +E+ L LF  M   G++PD +TFV++LSACS++G V+EG   F LM QE
Sbjct: 358 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QE 416

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y I+PS +HY C+ D+LGR G +  AY+F+K++  + +   IWG+LLG+CR+HG+ EL +
Sbjct: 417 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDA-SIWGALLGACRIHGNIELGK 475

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
             + +L E+D++N   GY+VLLSNIYA  G WE VDKVR   RERGL+K  G S I+V  
Sbjct: 476 FASDRLFEVDSKNV--GYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNR 533

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V+ F + +Q HP+  +IYE L  L  +M++ G
Sbjct: 534 KVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 566



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 136/503 (27%), Positives = 240/503 (47%), Gaps = 65/503 (12%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGD 241
           FD + +++V AWN+++S YV    + EA+  F +++L   IRP   +F  V  A  +L D
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD 133

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    ++    KLG ++  ++FVA+S I MY+  G    AR +FD+   R+   WN MI
Sbjct: 134 GRK---IHCWAFKLGFQW--NVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMI 188

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA-VSQLQELDLGQQLHAYIIKNF 360
            G +QN +  +A+++  + + L+ I  + VT +S L   V    +L L    H    K F
Sbjct: 189 SGLIQNGNAAQALDVLDE-MRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAH----KVF 243

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALL 418
             +PV        +DV+SWNT+I+ + QNGL  E +  VY+M ++   I  +  T  ++L
Sbjct: 244 EIIPV--------KDVISWNTLITGYAQNGLASEAIE-VYKMMEECKEIIPNQGTWVSIL 294

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
            A +++     G + H  +++  +H +  + + LID+Y K G +  A  +F +       
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ--VPQES 352

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             TWNA+I+ +  +G  E+    F +ML+  V P+ VT  S+L AC+  G +E GK    
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 412

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
               Y +  ++     ++D+  ++G +  A +    +P                      
Sbjct: 413 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP---------------------- 450

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCV 656
                       ++PDA  + A+L AC   G ++ G    D L + + K   +  +Y  +
Sbjct: 451 ------------LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSK---NVGYYVLL 495

Query: 657 ADMLGRVGKVVEAYEFVKELGEE 679
           +++   VGK  E  + V+ L  E
Sbjct: 496 SNIYANVGK-WEGVDKVRSLARE 517



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 169/380 (44%), Gaps = 61/380 (16%)

Query: 17  ATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNT 75
           ++   P    +H+L     K+++  I +RL  +    G   L+R  FD I +     WN+
Sbjct: 28  SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNS 87

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +I  +V N   +EAI  + Q+   S     D YT+  VLKAC     L  G+ +HC   +
Sbjct: 88  MISAYVHNGHFHEAIGCFYQLLLVSEIRP-DFYTFPPVLKACG---TLVDGRKIHCWAFK 143

Query: 136 CFSNPSRFVYNSLLNMYS----------------------------------------TC 155
                + FV  SL++MYS                                          
Sbjct: 144 LGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDV 203

Query: 156 LSSLDAEMVGLKYVEVD---------YSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVK 203
           L  +  E + + +V V          Y+K  L+    KVF+ +  ++V++WNT+++ Y +
Sbjct: 204 LDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ 263

Query: 204 TERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                EA+  ++MM     I P+  ++V++ PA + +G  +    ++G ++K       D
Sbjct: 264 NGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL--D 321

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +FVA+  I +Y + G    A  +F    + ++  WN +I  +  + H  + ++LF ++L+
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 381

Query: 323 LDEIVFDDVTFLSALSAVSQ 342
            + +  D VTF+S LSA S 
Sbjct: 382 -EGVKPDHVTFVSLLSACSH 400



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 34/253 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ I     + WNT+I G+  N L  EAI +Y  M++       +  T+ S+L A 
Sbjct: 239 AHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILPAY 297

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L+ G  +H   I+   +   FV   L+++Y  C   +DA                
Sbjct: 298 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDA---------------- 341

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F  + + + V WN I+S +       + ++ F  ML  G++P  ++FV++  A S
Sbjct: 342 --MSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACS 399

Query: 238 SLGDYKSADVVYGLLVKLGSE-------YVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
             G  +     + L+ + G +        + DL   +     Y E+  +DF +   D  L
Sbjct: 400 HSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG----YLEMA-YDFIK---DMPL 451

Query: 291 ERNTEVWNTMIGG 303
           + +  +W  ++G 
Sbjct: 452 QPDASIWGALLGA 464


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 224/672 (33%), Positives = 364/672 (54%), Gaps = 97/672 (14%)

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSL 159
           P++S    TY S+L+ C   ++L   K +H H I+  F      + N L+++Y    S +
Sbjct: 62  PHSS----TYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLV 117

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           +A                   +VFD M  +NVV+W  +++ Y + E   EA+  F  M  
Sbjct: 118 EAR------------------RVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQD 159

Query: 220 MGIRPSTISFVNVFPA---LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           +GI+P+  +F ++ PA   L  LG++         +VK G E  +++FV +  + MYA+ 
Sbjct: 160 VGIQPNHFTFASILPACTDLEVLGEFHDE------IVKGGFE--SNVFVGNGLVDMYAKR 211

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           GC +FAR++FD   +R+   WN MI GYVQN    +A++LF ++ + D I     T+ + 
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVI-----TWNTM 266

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           ++  +Q  +++   +L       F  +P        E+++VSWNTMI+ +VQNG   E  
Sbjct: 267 MAGYAQCGDVENAVEL-------FEKMP--------EQNLVSWNTMIAGYVQNGSVKEAF 311

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L   M ++    + ++  A++S                                   +A
Sbjct: 312 KLFQIMPER----NVISWNAVISG----------------------------------FA 333

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           ++G ++ A ++F+     + +  +WNAMIAGY+QNG  E A   F QM   ++ PN  T 
Sbjct: 334 QNGQVEEALKLFKTMP--ECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETF 391

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A VLPAC  +  +E G + H   IR     +V VG +L+ MY+K G I  A  VF ++ +
Sbjct: 392 AIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQ 451

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++S + + MI+GY  +G S+ +L LF  M+  G++PD +TFV VLSAC +AGLVDEG Q 
Sbjct: 452 QDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQY 511

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           FD+M + Y I P+ EHY C+ D+LGR G   EA + + ++  + +  ++WGSLL +CR H
Sbjct: 512 FDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDA-DMWGSLLSACRTH 570

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + +L E VA+ L+ ++ +N  P  +VLLSNIYA  G W+++  VR  M++R ++K++GC
Sbjct: 571 NNIDLGEKVAQHLIALNPQNPAP--YVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGC 628

Query: 757 SWIDVGGYVNRF 768
           SWI +   V+ F
Sbjct: 629 SWIVIKKQVHAF 640



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 194/371 (52%), Gaps = 27/371 (7%)

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           + ++ +  + G   E L ++ +M + G    S T  +LL    N ++    K  HA++++
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 440 HGIHFE----GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
               FE     + + L+ +Y K G +  AR++F++     ++  +W AMIA Y ++   +
Sbjct: 93  --TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPV--KNVVSWTAMIAAYARHEHGQ 148

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           EA   F +M +  + PN  T AS+LPAC    ++E+  + H   ++   + NVFVG  L+
Sbjct: 149 EALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLV 205

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMY+K G I +A  +F K+P+++ V++  MI GY Q+G+ E AL LF+ +     + D I
Sbjct: 206 DMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVI 261

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T+  +++  +  G V+  +++F+ M ++  +  +T     V +     G V EA++  + 
Sbjct: 262 TWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQN-----GSVKEAFKLFQI 316

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           + E  NV+  W +++     +G  E A  + K + E +  +    ++ +++  Y++ G  
Sbjct: 317 MPER-NVIS-WNAVISGFAQNGQVEEALKLFKTMPECNVVS----WNAMIAG-YSQNGQA 369

Query: 736 ENVDKVRKEMR 746
           EN  K+  +M+
Sbjct: 370 ENALKLFGQMQ 380



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 192/448 (42%), Gaps = 51/448 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V W  +I  +  +    EA+  + +M+        +++T++S+L AC
Sbjct: 119 ARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVG--IQPNHFTFASILPAC 176

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSL--------DAEMVGLK 167
            +   L +    H   ++     + FV N L++MY+   C+             ++V   
Sbjct: 177 TD---LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWN 233

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            +   Y +  L+    K+F  + +R+V+ WNT+++ Y +      AV  F  M    +  
Sbjct: 234 AMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL-- 291

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             +S+  +       G  K A  ++ ++ +       ++   ++ I  +A+ G  + A K
Sbjct: 292 --VSWNTMIAGYVQNGSVKEAFKLFQIMPE------RNVISWNAVISGFAQNGQVEEALK 343

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F    E N   WN MI GY QN     A++LF Q +++ ++  +  TF   L A + L 
Sbjct: 344 LFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQ-MQMVDMKPNTETFAIVLPACAALA 402

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            L+ G + H  +I++     V+V N ++                    ++D  S + MI 
Sbjct: 403 VLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIV 462

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +  NG   E L L  +MQ  G   D VT   +LSA  +    D G+Q    + R     
Sbjct: 463 GYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHIT 522

Query: 445 EGMESY--LIDMYAKSGLIKTARQIFEK 470
             ME Y  +ID+  ++G    A  +  K
Sbjct: 523 PAMEHYGCMIDLLGRAGCFDEANDLINK 550



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 150/325 (46%), Gaps = 40/325 (12%)

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A++  +KT     + ND           ++    + G L EA    + M+E+ + P+  T
Sbjct: 17  ARTNTLKTKEGTGKGND----------GLVKSLCKQGRLREALHILQDMVENGIWPHSST 66

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             S+L  C    ++   K LH   I+   + Q++ +G  L+ +Y K G +  A  VF ++
Sbjct: 67  YDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P KN V++T MI  Y +H   + AL  F  M+  GI+P+  TF ++L AC+        L
Sbjct: 127 PVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACT-------DL 179

Query: 635 QIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEI--WGS 688
           ++      E  ++   E    V     DM  + G +    EF +EL ++    ++  W +
Sbjct: 180 EVLGEFHDEI-VKGGFESNVFVGNGLVDMYAKRGCI----EFARELFDKMPQRDVVSWNA 234

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           ++     +G   L E   K   E+  R+ +  ++ +++  YA+ G+ EN  ++ ++M E+
Sbjct: 235 MIAGYVQNG---LIEDALKLFQEIPKRDVIT-WNTMMAG-YAQCGDVENAVELFEKMPEQ 289

Query: 749 GLRKEVGCSW-IDVGGYVNRFASKD 772
            L      SW   + GYV   + K+
Sbjct: 290 NL-----VSWNTMIAGYVQNGSVKE 309



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 26/279 (9%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+    +  + +S   Q G+   A +LF ++     V WN +I G+  N     A+ L+
Sbjct: 317 MPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLF 376

Query: 94  SQMK--KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            QM+     P T     T++ VL ACA    L  G   H   IR        V N+L+ M
Sbjct: 377 GQMQMVDMKPNTE----TFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGM 432

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
           Y+ C S  DA                   KVFD MR+++  + + ++  Y       E++
Sbjct: 433 YAKCGSIEDAR------------------KVFDRMRQQDSASLSAMIVGYAINGCSKESL 474

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
             F  M   G++P  ++FV V  A    G        + ++ +        +      I 
Sbjct: 475 ELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF-YHITPAMEHYGCMID 533

Query: 272 MYAELGCFDFARKIFDNC-LERNTEVWNTMIGGYVQNNH 309
           +    GCFD A  + +   ++ + ++W +++     +N+
Sbjct: 534 LLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNN 572


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 220/647 (34%), Positives = 351/647 (54%), Gaps = 30/647 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVF  M  R+V +WN +V  Y K     EA+  +  ML  G RP   +F  V  +   + 
Sbjct: 150 KVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVP 209

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+  +++ G     D  V ++ + MYA+ G  + ARK+FD     +   WN M
Sbjct: 210 DLTMGREVHAHVLRFGLGVEVD--VLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAM 267

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I G+ +N+     +ELF+ +LE DE+  + +T  S   A   L +LD  +++HA  +K  
Sbjct: 268 IAGHFENHECEAGLELFLHMLE-DEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRG 326

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            A  V   N++I+                    RD +SW  MIS + +NG  D+ L +  
Sbjct: 327 FATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYA 386

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
            M+      D VTV + L+A ++L   DVG + H      G I +  + + L++MYAKS 
Sbjct: 387 LMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSK 446

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           +I+ A ++F+     D+D  +W++MIAG+  N    EA   FR ML  +V PN VT  + 
Sbjct: 447 IIEKAIEVFKYMP--DKDVISWSSMIAGFCFNHKNFEALYYFRHMLA-DVKPNSVTFIAA 503

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC   G++  GK++H   +R  +    +V  +L+D+Y K G   YA   F     K+ 
Sbjct: 504 LAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDV 563

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  M+ G+  HG  + ALS F  M   G  PD +TFVA+L  CS AG+V +G ++F  
Sbjct: 564 VSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHS 623

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M ++Y I P+ +HY C+ D+L RVG++ E Y F+  +    +   +WG+LL  CR+H + 
Sbjct: 624 MTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDA-AVWGALLNGCRIHRNI 682

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL E+ AK +LE++  ++  GYHVLLS++YA+ G W  V KVRK MR +GL  + GCSW+
Sbjct: 683 ELGELAAKIVLELEPNDA--GYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWV 740

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           +V G ++ F + D+ HPQ  +I ++L+ +   M+ +G   +++ +++
Sbjct: 741 EVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLE 787



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 260/552 (47%), Gaps = 48/552 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS + + G    A ++F  +       WN ++ G+       EA+ LY +M  +      
Sbjct: 136 LSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARP-- 193

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D YT+  VL++C    +L +G+ VH H +R        V N+L+ MY+ C          
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKC---------- 243

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
               +V+ ++     KVFD M   + ++WN +++ + +       +  F  ML   + P+
Sbjct: 244 ---GDVEAAR-----KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPN 295

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            ++  +V  A   L D   A  ++ L VK G  +  D+   +S I MY+ LG    A  +
Sbjct: 296 LMTITSVTVASGLLSDLDFAKEIHALAVKRG--FATDVAFCNSLIQMYSSLGRMGEACTV 353

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   W  MI GY +N  P +A+E++  ++E++ +  DDVT  SAL+A + L  
Sbjct: 354 FSRMETRDAMSWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDVTVASALAACASLGR 412

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           LD+G +LH           ++V NA++E                    +DV+SW++MI+ 
Sbjct: 413 LDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAG 472

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  N  + E L     M       +SVT  A L+A +   +   GK+ HA++LR GI  E
Sbjct: 473 FCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASE 531

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           G + + L+D+Y K G    A   F  +  G +D  +WN M+AG+  +G  + A   F +M
Sbjct: 532 GYVPNALLDLYVKCGQTGYAWAQFGAH--GTKDVVSWNIMLAGFVAHGHGDIALSFFNEM 589

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           LE    P+ VT  ++L  C+  G +  G +L H  + +Y +  N+     ++D+ S+ G 
Sbjct: 590 LETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGR 649

Query: 564 INYAANVFAKIP 575
           +    N   ++P
Sbjct: 650 LTEGYNFINRMP 661



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 241/473 (50%), Gaps = 34/473 (7%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           L + ++ + M    G    A K+F    ER+   WN M+GGY +     EA++L+ ++L 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
                 D  TF   L +   + +L +G+++HA++++  + + V VLNA++          
Sbjct: 189 AGARP-DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVE 247

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                       D +SWN MI+   +N   + GL L   M +     + +T+T++  A+ 
Sbjct: 248 AARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASG 307

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            L + D  K+ HA  ++ G   +    + LI MY+  G +  A  +F + ++  RD  +W
Sbjct: 308 LLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMET--RDAMSW 365

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            AMI+GY +NG  ++A   +  M  +NV+P+ VT+AS L AC  +G +++G +LH  +  
Sbjct: 366 TAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATS 425

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
               + + V  +L++MY+KS +I  A  VF  +P+K+ +++++MI G+  +  +  AL  
Sbjct: 426 KGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYY 485

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADM 659
           FR M    ++P+++TF+A L+AC+  G +  G +I   + ++     ++E Y    + D+
Sbjct: 486 FRHMLA-DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQ---GIASEGYVPNALLDL 541

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEI-WGSLLGSCRLHGHSELAEVVAKKLLE 711
             + G+   A+    + G  G    + W  +L     HGH ++A     ++LE
Sbjct: 542 YVKCGQTGYAW---AQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLE 591


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 243/795 (30%), Positives = 400/795 (50%), Gaps = 51/795 (6%)

Query: 25  PQIHSLSPPIPKLKTPTIRSRLSK-ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           P IH+ +    +L    + + L +     GR   AR LFD +     V W ++I  +  +
Sbjct: 38  PAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQH 97

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
                AI L+   +K+S     + +  +SVL+AC +++ + +G+ VH   ++   + + +
Sbjct: 98  GRDDCAISLFVAFQKASCEVP-NEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVY 156

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           V  +L+N+Y+  L  +D  M+                 VF  +  R  V WNT+++ Y +
Sbjct: 157 VGTALINLYAK-LGCMDEAML-----------------VFHALPVRTPVTWNTVITGYAQ 198

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
                 A+  F  M   G+RP      +   A S+LG  +    ++G   +  +E   D 
Sbjct: 199 IGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATE--TDT 256

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLE-RNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
            V +  I +Y +      ARK+FD C+E RN   W TMI GY+QN+   EAI +F  + +
Sbjct: 257 SVINVLIDLYCKCSRLSAARKLFD-CMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ 315

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI---------- 366
                 D     S L++   L  +  G+Q+HA++IK       +V   +I          
Sbjct: 316 AGWQP-DGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLT 374

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               V +A+ E D +S+N MI  + +N    E + +   M+        +T  +LL  +S
Sbjct: 375 EARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSS 434

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           +    ++ KQ H  +++ G   +    S LID+Y+K  L+  A+ +F  N    +D   W
Sbjct: 435 SQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVF--NMLHYKDMVIW 492

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N+MI G+ QN   EEA   F Q+L   + PN  T  +++   + + ++  G+Q H + I+
Sbjct: 493 NSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIK 552

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             +D +  V  +LIDMY+K G I     +F     ++ + + +MI  Y QHG +E AL +
Sbjct: 553 AGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQV 612

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           FR M    +EP+ +TFV VLSAC++AG V EGL  F+ M+  Y I+P  EHY  V ++ G
Sbjct: 613 FRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFG 672

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R GK+  A EF++ +  +     +W SLL +C L G++E+    A+  L  D  +S P  
Sbjct: 673 RSGKLHAAKEFIERMPIK-PAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGP-- 729

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VLLSNIYA +G W +V  +R++M   G  KE GCSWI+V   V+ F  + +EHP++  I
Sbjct: 730 YVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELI 789

Query: 782 YEMLERLAMEMRNAG 796
           Y +L+ L   ++N G
Sbjct: 790 YSVLDELTSLIKNLG 804


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 218/716 (30%), Positives = 377/716 (52%), Gaps = 54/716 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ TY+ +++    T +L  GK  H H I+    P  F+ N+LL MY  C          
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC---------- 67

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
               E D +K     K+FD M +RNVV+WN+++S Y +   Y E +  F+      +R  
Sbjct: 68  ---GETDVAK-----KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLD 119

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F N         D +   +++ L+   G      + + +S I MY + G  D+AR +
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSG--LGGPVLLTNSLIDMYCKCGRIDWARLV 177

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ--L 343
           F++  E ++  WN++I GYV+     E + L V++L    +  +     SAL A      
Sbjct: 178 FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFS 236

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMI 383
             ++ G+ LH   +K  + L V+V  A+++                     +VV +N MI
Sbjct: 237 SSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 296

Query: 384 SAFVQ-----NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           + F+Q     +   +E + L +EMQ +G      T +++L A S +   + GKQ HA + 
Sbjct: 297 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 356

Query: 439 RHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           ++ +   E + + L+++Y+ SG I+   + F  + +   D  +W ++I G+ QNG  E  
Sbjct: 357 KYNLQSDEFIGNALVELYSLSGSIEDGLKCF--HSTPKLDVVSWTSLIVGHVQNGQFEGG 414

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F ++L     P+  TI+ +L AC  +  ++ G+Q+H ++I+  +     +  S I M
Sbjct: 415 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 474

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I+ A   F +    + V+++ MI    QHG ++ A+ LF  MKG GI P+ ITF
Sbjct: 475 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 534

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           + VL ACS+ GLV+EGL+ F++M++++ I P+ +H  C+ D+LGR G++ EA  F+ + G
Sbjct: 535 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 594

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            EG+ + +W SLL +CR+H  ++  + VA++++E++   +    +VLL NIY + G    
Sbjct: 595 FEGDPV-MWRSLLSACRVHKATDTGKRVAERVIELEPEAA--ASYVLLYNIYNDAGIQMP 651

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             ++R  M++RG++KE G SWI+VG  V+ F + D+ HP S  IY  LE +  E++
Sbjct: 652 ATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIK 707



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 264/548 (48%), Gaps = 66/548 (12%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A++LFD + +   V WN++I G+      +E + L+ + + S      D +T
Sbjct: 65  CKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSD--LRLDKFT 122

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +S+ L  C  T +LR+G+ +H             + NSL++MY  C              
Sbjct: 123 FSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKC-------------G 169

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            +D+++      VF++    + V+WN++++ YV+     E +R    MLR G+  ++ + 
Sbjct: 170 RIDWARL-----VFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYAL 224

Query: 230 VNVFPALSS--LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
            +   A  S      +   +++G  VKLG +   D+ V ++ +  YA++G  + A KIF 
Sbjct: 225 GSALKACGSNFSSSIECGKMLHGCAVKLGLDL--DVVVGTALLDTYAKIGDLEDATKIFK 282

Query: 288 NCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
              + N  ++N MI G++Q     +    EA+ LF + ++   +   + TF S L A S 
Sbjct: 283 LMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE-MQSRGMKPSEFTFSSILKACST 341

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
           ++  + G+Q+HA I K  +     + NA++E                     DVVSW ++
Sbjct: 342 IEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSL 401

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I   VQNG  + GL L +E+   G   D  T++ +LSA +NL     G+Q HAY ++ GI
Sbjct: 402 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 461

Query: 443 -HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            +F  +++  I MYAK G I +A   F+  ++ + D  +W+ MI+   Q+G  +EA   F
Sbjct: 462 GNFTIIQNSQICMYAKCGDIDSANMTFK--ETKNPDIVSWSVMISSNAQHGCAKEAVDLF 519

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELG-------KQLHGFSIRYLLDQNVFVGTSL 554
             M    + PN +T   VL AC+  G +E G       K+ HG +       NV     +
Sbjct: 520 ELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGIT------PNVKHSACI 573

Query: 555 IDMYSKSG 562
           +D+  ++G
Sbjct: 574 VDLLGRAG 581


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 238/796 (29%), Positives = 393/796 (49%), Gaps = 116/796 (14%)

Query: 44  SRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSP 101
           SRL ++ CQ G    AR++FD ++      W T I+   C    YE  I L+  M     
Sbjct: 128 SRLLEVYCQTGCVEDARRMFDKMSERNVFSW-TAIMEMYCGLGDYEETIKLFYLMVNEGV 186

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCH-------------------FIRC------ 136
               D++ +  V KAC+E +N R+GK V+ +                   FI+C      
Sbjct: 187 RP--DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244

Query: 137 ------FSNPSRFVYNSLLNMYST---------CLSSLDAEMVGLKYVEVDYS------- 174
                       F++N +++ Y++         C+S  D ++ G+K  +V ++       
Sbjct: 245 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCIS--DMKLSGVKPDQVTWNAIISGYA 302

Query: 175 ---KYDLVCKVFDTMR-----RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
              +++   K F  M      + NVV+W  +++   +     EA+  FR M+  G++P++
Sbjct: 303 QSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNS 362

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           I+  +   A ++L   +    ++G  +K+  E  +DL V +S +  YA+    + AR+ F
Sbjct: 363 ITIASAVSACTNLSLLRHGREIHGYCIKV-EELDSDLLVGNSLVDYYAKCRSVEVARRKF 421

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               + +   WN M+ GY       EAIEL      L E+ F                  
Sbjct: 422 GMIKQTDLVSWNAMLAGYALRGSHEEAIEL------LSEMKFQG---------------- 459

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                                    IE D+++WN +++ F Q G     L     M   G
Sbjct: 460 -------------------------IEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              ++ T++  L+A   +RN  +GK+ H Y+LR+ I    G+ S LI MY+    ++ A 
Sbjct: 495 MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVAC 554

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F +  +  RD   WN++I+   Q+G    A    R+M   NV  N VT+ S LPAC+ 
Sbjct: 555 SVFSELST--RDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSK 612

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  +  GK++H F IR  LD   F+  SLIDMY + G I  +  +F  +P+++ V++  M
Sbjct: 613 LAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVM 672

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I  YG HG    A++LF+  +  G++P+ ITF  +LSACS++GL++EG + F +M+ EY 
Sbjct: 673 ISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYA 732

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           + P+ E Y C+ D+L R G+  E  EF++++  E N   +WGSLLG+CR+H + +LAE  
Sbjct: 733 MDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNA-AVWGSLLGACRIHCNPDLAEYA 791

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ L E++ ++S  G +VL++NIY+  G WE+  K+R  M+ERG+ K  GCSWI+V   +
Sbjct: 792 ARYLFELEPQSS--GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKL 849

Query: 766 NRFASKDQEHPQSHKI 781
           + F   D  HP   +I
Sbjct: 850 HSFVVGDTSHPLMEQI 865



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 180/695 (25%), Positives = 311/695 (44%), Gaps = 104/695 (14%)

Query: 15  PTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWN 74
           P  T P   LP  +         KT  +R   +          ARQ     +   +V  N
Sbjct: 18  PKGTSPLQTLPTRNCCIVASTNTKTQNLRKLTN----------ARQRITGFSGGGSVHRN 67

Query: 75  TIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
            ++     NN    A +L S M  ++P    +   Y+S+L+ C +  NLR+G  VH   +
Sbjct: 68  GVL-----NN----AAMLLSSMDLTNPDECIE--IYASILQKCRKLYNLRLGFQVHAQLV 116

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
               +   F+ + LL +Y       DA                   ++FD M  RNV +W
Sbjct: 117 VNGVDVCEFLGSRLLEVYCQTGCVEDAR------------------RMFDKMSERNVFSW 158

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
             I+  Y     Y E ++ F +M+  G+RP    F  VF A S L +Y+    VY  ++ 
Sbjct: 159 TAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLS 218

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           +G E   +  V  S + M+ + G  D AR+ F+    ++  +WN M+ GY       +A+
Sbjct: 219 IGFE--GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKAL 276

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ--LHAYIIKNFVALPVIVLNAVI 372
           +  +  ++L  +  D VT+ + +S  +Q  + +   +  L    +K+F            
Sbjct: 277 KC-ISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDF------------ 323

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           + +VVSW  +I+   QNG D E L +  +M  +G   +S+T+ + +SA +NL     G++
Sbjct: 324 KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 383

Query: 433 THAYLLRHGIHFEGMES------YLIDMYAKSGLIKTARQIF---EKND----------- 472
            H Y ++     E ++S       L+D YAK   ++ AR+ F   ++ D           
Sbjct: 384 IHGYCIK----VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439

Query: 473 --SGDRDQA-----------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
              G  ++A                 TWN ++ G+TQ G  + A   F++M    + PN 
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNT 499

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            TI+  L AC  + N++LGK++HG+ +R  ++ +  VG++LI MYS    +  A +VF++
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++ V + ++I    Q G S  AL L R M    +E + +T V+ L ACS    + +G
Sbjct: 560 LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQG 619

Query: 634 LQIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKV 666
            +I   +    +    T ++    + DM GR G +
Sbjct: 620 KEIHQFI---IRCGLDTCNFILNSLIDMYGRCGSI 651



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 205/470 (43%), Gaps = 72/470 (15%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ S  + +Y + GC + AR++FD   ERN   W  ++  Y       E I+LF  ++  
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVN- 183

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
           + +  D   F     A S+L+   +G+ ++ Y++         V  ++++          
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     +DV  WN M+S +   G   + L  + +M+  G   D VT  A++S  + 
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYA- 302

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
                               FE    Y ++M    GL     + F+ N        +W A
Sbjct: 303 ----------------QSGQFEEASKYFLEM---GGL-----KDFKPN------VVSWTA 332

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY- 542
           +IAG  QNG   EA   FR+M+   V PN +TIAS + AC  +  +  G+++HG+ I+  
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD ++ VG SL+D Y+K   +  A   F  I + + V++  M+ GY   G  E A+ L 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             MK  GIEPD IT+  +++  +  G     L+ F  M     + P+T     ++  L  
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHS-MGMDPNTT---TISGALAA 508

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
            G+V        +LG+     EI G +     L  H EL+  V   L+ M
Sbjct: 509 CGQVRNL-----KLGK-----EIHGYV-----LRNHIELSTGVGSALISM 543



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           +NG+L  A +    M   N    +   AS+L  C  + N+ LG Q+H   +   +D   F
Sbjct: 66  RNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEF 125

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +G+ L+++Y ++G +  A  +F K+ E+N  ++T ++  Y   G  E  + LF  M   G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGK 665
           + PD   F  V  ACS       G  ++D     Y +    E   CV     DM  + G+
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYD-----YMLSIGFEGNSCVKGSILDMFIKCGR 240

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           +  A  F +E+  E   + +W  ++      G  + A      +     +     ++ ++
Sbjct: 241 MDIARRFFEEI--EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298

Query: 726 SNIYAEEGNWENVDKVRKEM 745
           S  YA+ G +E   K   EM
Sbjct: 299 SG-YAQSGQFEEASKYFLEM 317


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  365 bits (936), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 229/710 (32%), Positives = 370/710 (52%), Gaps = 49/710 (6%)

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A +  R  R G A+H   ++  +     V NSL+  Y     S    ++G  +       
Sbjct: 23  AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYC----SPPRPLLGAAFA------ 72

Query: 176 YDLVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM--GIRPSTISFVN 231
                 VF  +    R+V +WN++++  +   + + A+  FR M+     + P+  SF  
Sbjct: 73  ------VFADIPAGLRDVASWNSLLN-PLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAA 125

Query: 232 VFPALSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           VF A + +    +  V +    KL  S   N++FV+++ + MY +LG    AR++FD   
Sbjct: 126 VFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP 185

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   W  M+ GY       EA ELF  +L+   +  ++    + LSAVS    L +G 
Sbjct: 186 HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGV 245

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           QLH  ++K+ +   V V N+++                    ER+ ++W+ MI+ + QNG
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNG 305

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
             D    +  +M   GF     T   +L+A+S++    VGKQ H  +++ G   +  ++S
Sbjct: 306 EADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKS 365

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMYAK G    A+  F +    D D   W AMI G+ QNG  EEA + + +M +  V
Sbjct: 366 ALVDMYAKCGCTGDAKDGFHQLYDVD-DVVIWTAMITGHVQNGEHEEALMLYSRMDKEGV 424

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ +T+ SVL AC  +  +E GKQLH   ++        VGT+L  MYSK G +  +  
Sbjct: 425 MPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMV 484

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF ++P+++ +++ ++I G+ QHG    AL LF  MK  GI PD ITF+ VL ACS+ GL
Sbjct: 485 VFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGL 544

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGS 688
           VD G   F  M ++Y + P  +HY C+ D+L R G++ EA +F++ +  + G  L  W  
Sbjct: 545 VDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCL--WRI 602

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           +LG+CR     ++     ++L+E+ T +S    ++LLSNIYA +  W +V++VR  MR R
Sbjct: 603 VLGACRSLRDFDVGAYAGEQLMELGTEDS--SAYILLSNIYAAQRKWNDVERVRHLMRLR 660

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           G+ K+ GCSW+++   VN F   +Q+HP++ KI   L RLA  M++ G +
Sbjct: 661 GVSKDPGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHMKDEGYR 710



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 218/502 (43%), Gaps = 55/502 (10%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQI------HSLSPPIPKLKTP----TIRSRLSKIC 50
           M+S+   LP P           ++P        H+ +  +P            + L+  C
Sbjct: 110 MSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYC 169

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    AR++FD +     V W  ++ G+       EA  L+  M +  P    + +  
Sbjct: 170 KLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEK-NEFVA 228

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           ++VL A +    L IG  +H   ++        V NSL+ MY+     +DA M       
Sbjct: 229 TAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKA-ECMDAAMA------ 281

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      VF + + RN + W+ +++ Y +      A   F  M   G  P+  +FV
Sbjct: 282 -----------VFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFV 330

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A S +G        +GL+VKLG E    ++V S+ + MYA+ GC   A+  F    
Sbjct: 331 GILNASSDMGALVVGKQAHGLMVKLGFE--RQVYVKSALVDMYAKCGCTGDAKDGFHQLY 388

Query: 291 E-RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           +  +  +W  MI G+VQN    EA+ L+ + ++ + ++   +T  S L A + L  L+ G
Sbjct: 389 DVDDVVIWTAMITGHVQNGEHEEALMLYSR-MDKEGVMPSYLTVTSVLRACACLAALEPG 447

Query: 350 QQLHAYIIKNFVAL--------------------PVIVLNAVIERDVVSWNTMISAFVQN 389
           +QLHA I+K    L                     ++V   + +RD++SWN++IS F Q+
Sbjct: 448 KQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQH 507

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G   + L L  EM+ +G   D +T   +L A S++   D G      + +       ++ 
Sbjct: 508 GRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDH 567

Query: 450 Y--LIDMYAKSGLIKTARQIFE 469
           Y  ++D+ +++G +K A+   E
Sbjct: 568 YACIVDILSRAGQLKEAKDFIE 589


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 200/562 (35%), Positives = 323/562 (57%), Gaps = 27/562 (4%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           + ++LFVAS+ + +Y +     +ARK+FD   +R+T +WNTMI G V+N    +++++F 
Sbjct: 134 FDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFK 193

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQE-----------LDLGQQLHAYIIKNFVAL---- 363
            ++    +  D  T  + L AV+++QE           L LG     Y++   +++    
Sbjct: 194 DMVA-QGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKC 252

Query: 364 -----PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                  ++   + + D+VS+N +IS F  NG  +  +    E+   G  + S T+  L+
Sbjct: 253 EDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLI 312

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
             +S   +  +      + ++ G   +  + + L  +Y++   I  ARQ+F+  +S ++ 
Sbjct: 313 PVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD--ESSEKT 370

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
            A WNAMI+GY Q+GL E A   F++M+    TPN VTI S+L AC  +G +  GK +H 
Sbjct: 371 VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
                 L+QN++V T+LIDMY+K G I+ A+ +F    EKN+VT+ TMI GYG HG  + 
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDE 490

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           AL LF  M   G +P ++TF++VL ACS+AGLV EG +IF  M  +Y+I+P  EHY C+ 
Sbjct: 491 ALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMV 550

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G++ +A EF++++  E     +WG+LLG+C +H  + LA V +++L E+D  N 
Sbjct: 551 DILGRAGQLEKALEFIRKMPVEPGP-AVWGTLLGACMIHKDTNLARVASERLFELDPGNV 609

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GY+VLLSNIY+ E N+     VR+ +++R L K  GC+ I+V G  + F   D+ H Q
Sbjct: 610 --GYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQ 667

Query: 778 SHKIYEMLERLAMEMRNAGNKT 799
           +  IY  LE L  +MR  G ++
Sbjct: 668 TTSIYAKLEELTGKMREMGYQS 689



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/560 (26%), Positives = 261/560 (46%), Gaps = 56/560 (10%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+     K+   G    AR LF S+ +P   ++N +I GF  +     +I  Y+ + K++
Sbjct: 42  TVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFSP-DASSISFYTHLLKNT 100

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
              S DN+TY+  + A  +     +G  +H H +    + + FV ++L+++Y        
Sbjct: 101 TL-SPDNFTYAFAISASPDDN---LGMCLHAHAVVDGFDSNLFVASALVDLYC------- 149

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                 K+  V Y++     KVFD M  R+ V WNT+++  V+   Y ++V+ F+ M+  
Sbjct: 150 ------KFSRVAYAR-----KVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQ 198

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+R  + +   V PA++ + + K    +  L +KLG  +  D +V +  I ++++    D
Sbjct: 199 GVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHF--DDYVLTGLISVFSKCEDVD 256

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            AR +F    + +   +N +I G+  N     A++ F ++L   + V    T +  +   
Sbjct: 257 TARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRV-SSSTMVGLIPVS 315

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           S    L L   +  + +K+   L   V  A+                     E+ V +WN
Sbjct: 316 SPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWN 375

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL--- 437
            MIS + Q+GL +  + L  EM    F  + VT+T++LSA + L     GK  H  +   
Sbjct: 376 AMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSK 435

Query: 438 -LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
            L   I+   + + LIDMYAK G I  A Q+F+   + +++  TWN MI GY  +G  +E
Sbjct: 436 NLEQNIY---VSTALIDMYAKCGNISEASQLFDL--TSEKNTVTWNTMIFGYGLHGYGDE 490

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLI 555
           A   F +ML     P+ VT  SVL AC+  G +  G ++ H    +Y ++        ++
Sbjct: 491 ALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMV 550

Query: 556 DMYSKSGVINYAANVFAKIP 575
           D+  ++G +  A     K+P
Sbjct: 551 DILGRAGQLEKALEFIRKMP 570



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 13/227 (5%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKN 471
           T+ AL+S A    +     +THA L+R+G  H     + L       G  + AR +F   
Sbjct: 10  TLLALISKACTFPHL---AETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALF--F 64

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNI 529
                D   +N +I G++ +   + + ++F   L  N T  P+  T A  + A +P  N 
Sbjct: 65  SVPKPDIFLFNVLIKGFSFSP--DASSISFYTHLLKNTTLSPDNFTYAFAISA-SPDDN- 120

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
            LG  LH  ++    D N+FV ++L+D+Y K   + YA  VF K+P++++V + TMI G 
Sbjct: 121 -LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGL 179

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            ++   + ++ +F+ M   G+  D+ T   VL A +    V  G+ I
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGI 226


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 238/835 (28%), Positives = 409/835 (48%), Gaps = 163/835 (19%)

Query: 94  SQMKKSSPYTSCDNY-----TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           SQ K  S ++  DN       Y+SVL +C   +  ++GK VH H I+   +   F+   L
Sbjct: 44  SQQKNRSNFSLLDNKPLNTSKYASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKL 100

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           L MY+ C    DA+ +                  F+TM  RN+ +W  I+S Y+    + 
Sbjct: 101 LQMYARCGLLKDADFL------------------FETMPMRNLHSWKAILSVYLDHGLFE 142

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA   F+++   G+      F  VF A S LG  +    ++GL++K    +  +++V+++
Sbjct: 143 EAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKF--RFCLNIYVSNA 200

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMI--------------------------- 301
            I MY + G  D A+K+     ER++  WN++I                           
Sbjct: 201 LIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMP 260

Query: 302 ---------GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
                    GG+ QN +  EAIE+  + ++++ +V +  T    L A ++LQ LDLG+QL
Sbjct: 261 NVVSWSAVIGGFAQNGYDEEAIEMLFR-MQVEGLVPNAQTLAGVLPACARLQRLDLGKQL 319

Query: 353 HAYI------------------------------------IKNFVALPVIVLNAV----- 371
           H YI                                    +KN ++   +++        
Sbjct: 320 HGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDV 379

Query: 372 --------------IERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTA 416
                         IER ++SWN++IS +V+N + DE   +   M  ++G   DS T+ +
Sbjct: 380 SKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGS 439

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           +L+A ++  +   GK+ HA  +  G+  +  +   L++MY+K   +  A+  F+  +  +
Sbjct: 440 VLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFD--EVME 497

Query: 476 RDQATWNAMIAGYTQN------------------------------GLLEE-----AFVA 500
           +D  TWNA+I+GYT++                              GL+E          
Sbjct: 498 KDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQL 557

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M    + P++ T+  +LPAC+ +  +E GKQ H  SI+   D +V +G +L+DMY+K
Sbjct: 558 FSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAK 617

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G + YA   + +I   N V++  M+     HG  E  +SLF++M   G  PD +TF++V
Sbjct: 618 CGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSV 677

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LS+C + G V+ G + FDLM   Y ++P+ +HY  + D+L R G++ EAYE +K++  E 
Sbjct: 678 LSSCVHVGSVETGCEFFDLMGY-YNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVEC 736

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           + + +WG+LLG C  HG+ EL E+ A++L+E++  NS  G +VLL+N++A    W ++ +
Sbjct: 737 DSV-LWGALLGGCVTHGNIELGEIAAERLIELEPNNS--GNYVLLANLHAYARRWTDLAR 793

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           VR  M++RG+ K  GCSWI+    ++ F + D+ H ++ +IY  L+ LA+ M+  
Sbjct: 794 VRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMKTG 848



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 55/230 (23%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNN---------------------LPYEAIL----- 91
           A+  FD +       WN +I G+  +N                       + +IL     
Sbjct: 488 AQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVE 547

Query: 92  ---------LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
                    L+S+M+ S      D YT   +L AC+    L  GK  H H I+C  +   
Sbjct: 548 NRQLDLTMQLFSEMQISK--LRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDV 605

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            +  +L++MY+ C S        LKY ++ Y          D +   N+V+ N +++   
Sbjct: 606 HIGAALVDMYAKCGS--------LKYAQLAY----------DRISNPNLVSHNAMLTACA 647

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
                 E +  F+ ML +G  P  ++F++V  +   +G  ++    + L+
Sbjct: 648 MHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLM 697


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 229/724 (31%), Positives = 388/724 (53%), Gaps = 49/724 (6%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           +EA   Y QMKK+    + D     S+LKAC+ +  +R GK++H   ++   +      N
Sbjct: 31  WEACSRYHQMKKAGAQLT-DPTLVHSILKACS-SLPVRHGKSIHASLLKQGFDSLTSTGN 88

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           S+L+ Y             +K   +D + +     VFD+MR R+ V+WN ++  ++    
Sbjct: 89  SVLDFY-------------MKTGALDSALF-----VFDSMRSRDSVSWNIMIHGHLSRGA 130

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
             + +  FR    +   P+  + V    A  SLG  +    ++G +++ G  +++   V 
Sbjct: 131 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG--FLDIPSVQ 188

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MYA+    + A ++FD   ER+   W+ MIGGYVQ      A++LF+++     I
Sbjct: 189 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASI 247

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             D +T +S L A +   ++ +G+ +H  +I   +   + V N++I+             
Sbjct: 248 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFK 307

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  R+ VSWN++IS  V+     E L L Y M K GF  D VT+  LL +     +
Sbjct: 308 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 367

Query: 427 QDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               K  H+ ++R G    E + + LID Y+K  LI+ A ++F++  +  +D  +W+AMI
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKT--KDTVSWSAMI 425

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           AG+   G  +EA   F++M +    PN VTI S+L A +   +++  K  HG +IR  L 
Sbjct: 426 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLA 485

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             V VGT+++DMY+K G I  +   F +IPEKN V++  MI   G +G++  AL+L   M
Sbjct: 486 AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEM 545

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           K  G++P+ +T ++VLSACS+ GLV+EGL  F+ M Q++ ++P  EHY C+ DML R GK
Sbjct: 546 KLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGK 605

Query: 666 VVEAYEFVKELGEE-GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  A   ++++ E   +   +WG+LL +CR  G+S L    A ++LE++ ++S  GY  L
Sbjct: 606 LNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSS-AGY-FL 663

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
            S++YA  G W +  ++R  ++ RG+R   G S + V     RF + D+ HP++ +I+ +
Sbjct: 664 ASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGV 723

Query: 785 LERL 788
           +E+L
Sbjct: 724 VEQL 727



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 171/613 (27%), Positives = 274/613 (44%), Gaps = 69/613 (11%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLK------TPTIRSRLSKICQEGR 54
           M  +   L  P    +       LP  H  S     LK      T T  S L    + G 
Sbjct: 40  MKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGA 99

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTSCDNYTYSS 112
              A  +FDS+    +V WN +I G +      + +  + Q +     P  S    T   
Sbjct: 100 LDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVS----TLVL 155

Query: 113 VLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            + AC     +  G  +H + IR      PS  V NSLL+MY+      D +M       
Sbjct: 156 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPS--VQNSLLSMYA------DNDM------- 200

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISF 229
                 +   ++FD M  R+V++W+ ++  YV+T     A++ F  M     I    I+ 
Sbjct: 201 ------ERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITM 254

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V+V  A ++ GD      V+G+++  G +Y  DLFV +S I MY++    + A K F+  
Sbjct: 255 VSVLKACANTGDISMGRSVHGVVICRGLDY--DLFVGNSIIDMYSKCDDHESAFKAFNEM 312

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             RNT  WN++I G V+     EA+ LF  + +      D+VT ++ L +     +    
Sbjct: 313 PCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG-FRADEVTLVNLLQSCKYFVDPFQC 371

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           + +H+ +I+    L   V+N++I+                    +D VSW+ MI+ F   
Sbjct: 372 KFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHC 431

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G  DE + L  EM +     + VT+ +LL A S   +    K  H   +R G+  E  + 
Sbjct: 432 GKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVG 491

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + ++DMYAK G I  +R+ F++    +++  +W AMIA    NGL  +A     +M  H 
Sbjct: 492 TAILDMYAKCGEIGLSRKAFDQIP--EKNIVSWGAMIAACGMNGLARDALALLSEMKLHG 549

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG----TSLIDMYSKSGVI 564
           + PNVVT  SVL AC+  G +E G     F    + D  V  G    + ++DM S++G +
Sbjct: 550 LKPNVVTTLSVLSACSHGGLVEEGLS---FFENMVQDHGVEPGLEHYSCMVDMLSRAGKL 606

Query: 565 NYAANVFAKIPEK 577
           N A N+  K+PE+
Sbjct: 607 NSAMNLIEKMPER 619



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 232/480 (48%), Gaps = 47/480 (9%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L  P++++ L  +  +     A +LFD +     + W+ +I G+V       A+ L+ +M
Sbjct: 182 LDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEM 241

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             S+     D  T  SVLKACA T ++ +G++VH   I    +   FV NS+++MYS C 
Sbjct: 242 -TSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKC- 299

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                              ++   K F+ M  RN V+WN+I+S  V+TE++ EA+  F  
Sbjct: 300 -----------------DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 342

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M + G R   ++ VN+  +     D      ++ ++++ G E +N+ FV +S I  Y++ 
Sbjct: 343 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE-LNE-FVINSLIDAYSKC 400

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
              + A K+FD    ++T  W+ MI G+     P EAI LF ++ +  E   + VT LS 
Sbjct: 401 DLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP-NGVTILSL 459

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L A S   +L   +  H   I+  +A  V V  A++                    E+++
Sbjct: 460 LEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNI 519

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSW  MI+A   NGL  + L L+ EM+  G   + VT  ++LSA S+    + G      
Sbjct: 520 VSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 437 LLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAGYTQNG 492
           +++ HG+   G+E Y  ++DM +++G + +A  + EK     RD A  W A+++    +G
Sbjct: 580 MVQDHGVE-PGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSG 638


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 230/740 (31%), Positives = 367/740 (49%), Gaps = 109/740 (14%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST------CLSSLDAEM 163
           Y+ +L+ C    N   G+A+H H ++     S ++ N+LL  Y++      C        
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 164 VGLKYVEVDYSKYDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
             + Y   +   ++ +               VF  M  R+ V+W  ++    ++ R+ +A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           V+ F  M+  G  PS  +  NV  + +++        V+  +VKLG      + VA+S +
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSC--VPVANSVL 389

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
           +MY + G  + AR +F+    R+   WN M+  Y                +EL       
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGR-----------MEL------- 431

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
                   AVS  + +                         +ER +VSWNT+I+ + QNG
Sbjct: 432 --------AVSMFENM-------------------------VERSIVSWNTIIAGYNQNG 458

Query: 391 LDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           LD   L     M     M  D+ TVT++LSA +NLR   +GKQ H+Y+LR G+     + 
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGD-------------------------------RD 477
           + LI  YAKSG ++TAR+I ++    D                               RD
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              W AMI GY QNG  +EA   FR M+     PN  T+A+VL AC  +  ++ GKQ+H 
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHC 638

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
            +IR L +Q+V V  ++I +Y++SG +  A  VF +I   K ++T+T+MI+   QHG+ E
Sbjct: 639 KAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGE 698

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
           +A+ LF  M   G++PD IT+V VLSAC++AG VD+G + ++ MQ E+ I P   HY C+
Sbjct: 699 QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACM 758

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+  R G + EA+EF++ +    + + +WGSLL +CR+  +++LAE+ A KLL +D  N
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTV-VWGSLLAACRVRKNADLAELAAGKLLSIDPHN 817

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S  G +  L+N+Y+  G W +  ++ K  +++G++KE G SW  V G V+ F + D  HP
Sbjct: 818 S--GAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHP 875

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           Q   IY     +  E++ AG
Sbjct: 876 QRDSIYRKAAEMWEEIKKAG 895



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 249/608 (40%), Gaps = 110/608 (18%)

Query: 33  PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           P  +    T  S LS   + GR   A  +F  +     V W  +I+G   +   ++A+  
Sbjct: 275 PYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKT 334

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
           +  M       S   +T ++VL +CA      +G+ VH   ++   +    V NS+L MY
Sbjct: 335 FLDMVSEGFAPS--QFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMY 392

Query: 153 STCLSSLDA----EMVGLKYVE---------VDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
             C  +  A    E + ++ V              + +L   +F+ M  R++V+WNTI++
Sbjct: 393 GKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIA 452

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG-- 256
            Y +      A++ F RM+    + P   +  +V  A ++L   K    ++  +++ G  
Sbjct: 453 GYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMP 512

Query: 257 ----------SEY-----------------VNDLFVASSAIFM--YAELGCFDFARKIFD 287
                     S Y                 V DL V S    +  Y +LG    AR+IFD
Sbjct: 513 CSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFD 572

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   W  MI GY QN    EA+ELF  ++ +     +  T  + LSA + L  LD
Sbjct: 573 IMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEP-NSHTLAAVLSACASLAYLD 631

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAF 386
            G+Q+H   I++     V V NA+I                      ++ ++W +MI A 
Sbjct: 632 YGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAM 691

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFE 445
            Q+GL ++ ++L  EM + G   D +T   +LSA ++    D GK+ +  +   HGI   
Sbjct: 692 AQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGI-VP 750

Query: 446 GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            M  Y  ++D++A++GL+  A +  ++                                 
Sbjct: 751 QMSHYACMVDLHARAGLLTEAHEFIQRMP------------------------------- 779

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
                V P+ V   S+L AC    N +L  +L    +  +   N    ++L ++YS  G 
Sbjct: 780 -----VAPDTVVWGSLLAACRVRKNADLA-ELAAGKLLSIDPHNSGAYSALANVYSACGR 833

Query: 564 INYAANVF 571
            N AA ++
Sbjct: 834 WNDAARIW 841



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 203/445 (45%), Gaps = 34/445 (7%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
            +GR  LA  +F+++   + V WNTII G+  N L   A+  +S+M  +S     D +T 
Sbjct: 425 HQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP-DAFTV 483

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +SVL ACA  R L++GK +H + +R     S  + N+L++ Y+   S   A  +  + V 
Sbjct: 484 TSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVV 543

Query: 171 VDYSKYDLVC---------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            D +                     ++FD M  R+V+AW  ++  Y +  +  EA+  FR
Sbjct: 544 ADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFR 603

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M+ +G  P++ +   V  A +SL        ++   ++   E    + V+++ I +YA 
Sbjct: 604 SMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE--QSVSVSNAIITVYAR 661

Query: 276 LGCFDFARKIFDN-CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
            G    AR++FD  C  + T  W +MI    Q+    +A+ LF +++ +  +  D +T++
Sbjct: 662 SGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVG-VKPDHITYV 720

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
             LSA +    +D G++ +  +      +P           +  +  M+    + GL  E
Sbjct: 721 GVLSACAHAGFVDKGKRYYEQMQNEHGIVP----------QMSHYACMVDLHARAGLLTE 770

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
               +   Q+     D+V   +LL+A    +N D+ +     LL    H  G  S L ++
Sbjct: 771 AHEFI---QRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANV 827

Query: 455 YAKSGLIKTARQIFE-KNDSGDRDQ 478
           Y+  G    A +I++ + D G + +
Sbjct: 828 YSACGRWNDAARIWKLRKDKGVKKE 852


>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
 gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 212/627 (33%), Positives = 332/627 (52%), Gaps = 92/627 (14%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L S    + F+ ++ +  YA LG    AR++FD    RNT  +N ++  Y +   P EA 
Sbjct: 44  LKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEAR 103

Query: 315 ELF--------------------------------VQVLELDEIVFDDVTFLSALSAVSQ 342
            LF                                +  +  D+ V +  +F SALSA + 
Sbjct: 104 ALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAA 163

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
            ++   G+Q+H  + ++  A  V + +A++                    ER+VVSWN++
Sbjct: 164 EKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSL 223

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+ + QNG   E LML  EM   GF  D VT+++++SA + L     G+Q HA++++   
Sbjct: 224 ITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDR 283

Query: 443 HFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSG-------------------------- 474
             + M   + L+DMYAK G    AR IF+   S                           
Sbjct: 284 LRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFS 343

Query: 475 ---DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
              +++   WN +IA Y QNG  EEA   F Q+   ++ P   T  +VL AC  + +++L
Sbjct: 344 QMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQL 403

Query: 532 GKQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           G+Q H      GF   +  + +VFVG SL+DMY K+G I+  A VF ++  +++V++  M
Sbjct: 404 GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAM 463

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I+GY Q+G ++ AL LF  M      PD++T + VLSAC ++GLVDEG + F  M +++ 
Sbjct: 464 IVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHG 523

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I PS +HY C+ D+LGR G + EA E + ++  E + + +W SLLG+CRLH + EL E  
Sbjct: 524 ITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSV-LWASLLGACRLHKNVELGEWT 582

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A +L E+D +NS P  +VLLSN+YAE G W  V +VR+ M++RG+ K+ GCSWI++G  +
Sbjct: 583 AGRLFELDPQNSGP--YVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKM 640

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEM 792
           N F ++D+ HP  ++I+  L  + MEM
Sbjct: 641 NVFLARDKRHPCRNEIHNTLRIIQMEM 667



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 155/642 (24%), Positives = 280/642 (43%), Gaps = 132/642 (20%)

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV-------------GLKY 168
           NL   +A H   ++       F+ N+L++ Y+      DA  V              L  
Sbjct: 32  NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLS 91

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER--YVEAVRQFRMMLRMGIRPST 226
                 + D    +F+ +   +  ++N +V+   +  R    +A+R    M       + 
Sbjct: 92  AYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNA 151

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            SF +   A ++  D ++ + V+GL+ +  S + +D+ + S+ + MYA+    + AR++F
Sbjct: 152 YSFASALSACAAEKDSRTGEQVHGLVAR--SPHADDVHIRSALVDMYAKCERPEDARRVF 209

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   ERN   WN++I  Y QN    EA+ LFV+++       D+VT  S +SA + L   
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAG-FSPDEVTLSSVMSACAGLAAD 268

Query: 347 DLGQQLHAYIIKN-----------------------------FVALPV------------ 365
             G+Q+HA+++K                              F ++P             
Sbjct: 269 REGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTG 328

Query: 366 -----------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                      +V + ++E++V++WN +I+A+ QNG ++E + L  ++++        T 
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES------YLIDMYAKSGLIKTARQI 467
             +L+A  N+ +  +G+Q H ++L+ G  F+ G ES       L+DMY K+G I    ++
Sbjct: 389 GNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           FE+  +  RD  +WNAMI GY QNG  ++A   F +ML  N  P+ VT+  VL AC   G
Sbjct: 449 FERMAA--RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSG 506

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----Y 582
            ++ G+       RY                            F  + E + +T     Y
Sbjct: 507 LVDEGR-------RY----------------------------FHSMTEDHGITPSRDHY 531

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL----QIFD 638
           T M+   G+ G  + A  L   M    +EPD++ + ++L AC     V+ G     ++F+
Sbjct: 532 TCMVDLLGRAGHLKEAEELINDMP---MEPDSVLWASLLGACRLHKNVELGEWTAGRLFE 588

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L  Q      ++  Y  +++M   +GK  E +   + + + G
Sbjct: 589 LDPQ------NSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRG 624



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 240/592 (40%), Gaps = 124/592 (20%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           IP   T +  + LS   + GRP  AR LF++I  P    +N ++     +   + A  L 
Sbjct: 78  IPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALR 137

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
                 +     + Y+++S L ACA  ++ R G+ VH    R        + ++L++MY+
Sbjct: 138 FLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYA 197

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C    DA                   +VFD M  RNVV+WN++++ Y +     EA+  
Sbjct: 198 KCERPEDAR------------------RVFDAMPERNVVSWNSLITCYEQNGPVGEALML 239

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M+  G  P  ++  +V  A + L   +    V+  +VK      +D+ + ++ + MY
Sbjct: 240 FVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKC-DRLRDDMVLNNALVDMY 298

Query: 274 AELGCFDFARKIFDN-------------------------------CLERNTEVWNTMIG 302
           A+ G    AR IFD+                                +E+N   WN +I 
Sbjct: 299 AKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIA 358

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
            Y QN    EAI LFVQ L+ D I     T+ + L+A   + +L LGQQ H +++K    
Sbjct: 359 AYAQNGEEEEAIRLFVQ-LKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFR 417

Query: 360 ---------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                    FV   ++              V   +  RD VSWN MI  + QNG   + L
Sbjct: 418 FDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDAL 477

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGI-----HFEGMESY 450
            L   M       DSVT+  +LSA  +    D G++  H+    HGI     H+  M   
Sbjct: 478 HLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCM--- 534

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            +D+  ++G +K A ++   ND                                    + 
Sbjct: 535 -VDLLGRAGHLKEAEELI--NDM----------------------------------PME 557

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           P+ V  AS+L AC    N+ELG+   G  +  L  QN      L +MY++ G
Sbjct: 558 PDSVLWASLLGACRLHKNVELGEWTAG-RLFELDPQNSGPYVLLSNMYAEMG 608



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+H L    P      IRS L  +   C+  RP  AR++FD++     V WN++I  +  
Sbjct: 172 QVHGLVARSPHADDVHIRSALVDMYAKCE--RPEDARRVFDAMPERNVVSWNSLITCYEQ 229

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N    EA++L+ +M  +    S D  T SSV+ ACA     R G+ VH H ++C      
Sbjct: 230 NGPVGEALMLFVEMMAAG--FSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDD 287

Query: 143 FVYN-SLLNMYSTCLSSLDAE----------MVGLKYVEVDYSKYDLVCK---VFDTMRR 188
            V N +L++MY+ C  + +A           +V    +   Y+K   V     VF  M  
Sbjct: 288 MVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVE 347

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           +NV+AWN +++ Y +     EA+R F  + R  I P+  ++ NV  A  ++ D +     
Sbjct: 348 KNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQA 407

Query: 249 YGLLVKLGSEY----VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           +  ++K G  +     +D+FV +S + MY + G  D   K+F+    R+   WN MI GY
Sbjct: 408 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGY 467

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN    +A+ LF ++L  +E   D VT +  LSA      +D G++    + ++    P
Sbjct: 468 AQNGRAKDALHLFERMLCSNENP-DSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITP 526

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    RD   +  M+    + G   E   L+ +M  +    DSV   +LL A    
Sbjct: 527 --------SRD--HYTCMVDLLGRAGHLKEAEELINDMPMEP---DSVLWASLLGACRLH 573

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           +N ++G+ T   L        G    L +MYA+ G
Sbjct: 574 KNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMG 608


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 236/757 (31%), Positives = 384/757 (50%), Gaps = 65/757 (8%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN ++          +A+ +  ++  +S   + D +T    LK+C        G+ VH  
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHAV 88

Query: 133 FIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             +   ++   FV NSL++MY  C    DAE                  KVF+ M  RN+
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAE------------------KVFEGMAGRNL 130

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+WN +++      R +E  R     L     P   + V V P  ++L   ++   V+GL
Sbjct: 131 VSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGL 190

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE------RNTEVWNTMIGGYV 305
            VK G +      V++  + MYA+ G    A   F   LE      RN   WN M+GGY 
Sbjct: 191 AVKSGWDAAPR--VSNVLVDMYAKCGEMADAECAF---LEAPPGAGRNVVSWNVMLGGYA 245

Query: 306 QNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL- 363
           +N     A  L  ++ +E   +  D++T LS L   S L EL   ++LHA++++  + L 
Sbjct: 246 RNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLT 305

Query: 364 --------------------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                                  V + +  + V SWN +I A  QNG     + L  EM 
Sbjct: 306 GDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMT 365

Query: 404 KQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLI 461
              G   D  ++ +LL A  NL++   GK  H ++LR+G+  +  +   L+ +Y + G  
Sbjct: 366 NACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRE 425

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASV 519
             AR +F+  +  ++D+ +WN MIAGY+QNGL  E+   FR+M        P+++   S 
Sbjct: 426 SLARVLFDAVE--EKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSA 483

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC+ +  + LGK++H F+++  L ++ F+ +S+IDMYSK G ++ A   F ++  K++
Sbjct: 484 LVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDA 543

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++T MI GY  +G  + A+ L+  M   G+EPD  T++ +L AC +AG++++GL  F  
Sbjct: 544 VSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQE 603

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+   KI+   EHY CV  ML R G+  +A   ++ + EE +  +I  S+L +C +HG  
Sbjct: 604 MRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDA-KILSSVLSACHMHGEV 662

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL + VA KLLE++   +   ++VL SN+YA    W+ + KVRK +R+ G+ KE GCSWI
Sbjct: 663 ELGKKVADKLLELEPHKAE--HYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWI 720

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           D+ G V  F + +   P+ HK+ +M   L  ++R AG
Sbjct: 721 DIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAG 757



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 176/414 (42%), Gaps = 41/414 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD I       WN +I     N     AI L+ +M  +      D ++  S+L AC
Sbjct: 326 ACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKP-DWFSIGSLLLAC 384

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              ++L  GKA H   +R       F+  SLL++Y  C                   +  
Sbjct: 385 GNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQC------------------GRES 426

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMGIRPSTISFVNVFPA 235
           L   +FD +  ++ V+WNT+++ Y +     E+++ FR M   + G  PS ++  +   A
Sbjct: 427 LARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVA 486

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S L   +    ++   +K  ++   D F++SS I MY++ G  D AR  FD    ++  
Sbjct: 487 CSELPAVRLGKEMHCFALK--ADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAV 544

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  MI GY  N    EA+ L+ + +  + +  D  T+L  L A      L+ G      
Sbjct: 545 SWTVMITGYAVNGRGKEAVGLYDK-MGREGMEPDGFTYLGLLMACGHAGMLEDGL----C 599

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
             +    LP       IE  +  +  +I    + G   + + L+  M ++    D+  ++
Sbjct: 600 FFQEMRNLP------KIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEE---PDAKILS 650

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
           ++LSA       ++GK+    LL    H    E Y++  +MYA S      R++
Sbjct: 651 SVLSACHMHGEVELGKKVADKLLELEPH--KAEHYVLASNMYAGSRQWDEMRKV 702



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 22/199 (11%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSP 101
           S LS   Q GR  LAR LFD++     V WNT+I G+  N LP E++ L+ +M  KK   
Sbjct: 414 SLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGH 473

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           + S      +S L AC+E   +R+GK +HC  ++       F+ +S+++MYS C S  DA
Sbjct: 474 WPSL--LAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDA 531

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            +                   FD ++ ++ V+W  +++ Y    R  EAV  +  M R G
Sbjct: 532 RV------------------FFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREG 573

Query: 222 IRPSTISFVNVFPALSSLG 240
           + P   +++ +  A    G
Sbjct: 574 MEPDGFTYLGLLMACGHAG 592


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 213/630 (33%), Positives = 342/630 (54%), Gaps = 93/630 (14%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT--------------- 299
           L +++  ++F+ +  I +Y +  C D ARK+FD   +RNT  WN+               
Sbjct: 42  LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAA 101

Query: 300 ----------------MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                           M+ G+ Q++   E++E FV+ +  ++ + ++ +F SALSA + L
Sbjct: 102 RLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK-MHREDFLLNEYSFGSALSACAGL 160

Query: 344 QELDLGQQLHAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMI 383
            +L++G Q+HA + K+                     VA    V + +IER++V+WN++I
Sbjct: 161 MDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + QNG   E L +   M   G   D VT+ +++SA ++L     G Q HA +++    
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280

Query: 444 FEGM--ESYLIDMYAKSGLIKTARQIFEKND-----------SG---------------- 474
            + +   + L+DMYAK   +  AR++F++             SG                
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSK 340

Query: 475 --DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              R+  +WNA+IAGYTQNG  EEA   FR +   ++ P   T  ++L AC  + ++ LG
Sbjct: 341 MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLG 400

Query: 533 KQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           +Q H      GF  +   + ++FVG SLIDMY K G I   + VF K+ E++ V++  +I
Sbjct: 401 RQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAII 460

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
           +GY Q+G    AL +FR M  CG +PD +T + VL ACS+AGLV+EG   F  M +E+ +
Sbjct: 461 VGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGL 519

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  +HY C+ D+LGR G + EA   ++ +    + + +WGSLL +C++HG+ E+ +  A
Sbjct: 520 IPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV-VWGSLLAACKVHGNIEMGKHAA 578

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           +KLLE+D  NS P  +VLLSN+YAE G W +V +VRK MR++G+ K+ GCSWI+V   V+
Sbjct: 579 EKLLEIDPWNSGP--YVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVH 636

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F  KD+ HP   +IY +L+ L  +M+  G
Sbjct: 637 VFLVKDKSHPHRKQIYSVLKMLTEQMKRVG 666



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 296/649 (45%), Gaps = 128/649 (19%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV----- 164
           ++ +L +C  +R+ R  + VH   +    +   F+ N L+++Y  C    DA  +     
Sbjct: 18  FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77

Query: 165 --------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                    L  V       D   ++F +M   +  +WN++VS + + +R+ E++  F  
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M R     +  SF +   A + L D      V+ L+ K  S Y  D+++ S+ I MY++ 
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK--SRYSTDVYMGSALIDMYSKC 195

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    A ++F   +ERN   WN++I  Y QN    EA+E+FV++++   +  D+VT  S 
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD-SGLEPDEVTLASV 254

Query: 337 LSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVI----------------------- 372
           +SA + L  L  G Q+HA ++K N     +++ NA++                       
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 373 ----------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                       +R+VVSWN +I+ + QNG ++E L L   +++
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES------YLIDMYAK 457
           +       T   LLSA +NL +  +G+Q H ++L+ G  F+ G ES       LIDMY K
Sbjct: 375 ESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMK 434

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I+   ++FEK    +RD  +WNA+I GY QNG   EA   FR+ML     P+ VT+ 
Sbjct: 435 CGSIEDGSRVFEKMK--ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 492

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVINYAANVFA 572
            VL AC+  G +E G+  H F   + ++++  +      T ++D+  ++G +N A N+  
Sbjct: 493 GVLCACSHAGLVEEGR--HYF---FSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIE 547

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            +P                                  + PDA+ + ++L+AC   G ++ 
Sbjct: 548 AMP----------------------------------VNPDAVVWGSLLAACKVHGNIEM 573

Query: 633 GLQIFDLMQQEYKIQP-STEHYCCVADM---LGRVGKVVEAYEFVKELG 677
           G       ++  +I P ++  Y  +++M   LGR G VV   + +++ G
Sbjct: 574 GKHA---AEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQG 619



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 239/541 (44%), Gaps = 81/541 (14%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L     L   +P+  T T  S +S + + G    A +LF S+  P    WN+++ GF  +
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           +   E++  + +M +       + Y++ S L ACA   +L +G  VH    +   +   +
Sbjct: 126 DRFEESLEYFVKMHREDFLL--NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVY 183

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           + ++L++MYS C S   AE                  +VF  M  RN+V WN++++ Y +
Sbjct: 184 MGSALIDMYSKCGSVACAE------------------EVFSGMIERNLVTWNSLITCYEQ 225

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
                EA+  F  M+  G+ P  ++  +V  A +SL   K    ++  +VK  +++ +DL
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT-NKFRDDL 284

Query: 264 FVASSAIFMYAELGCFDFARKIFD-------------------------------NCLER 292
            + ++ + MYA+    + AR++FD                                  +R
Sbjct: 285 VLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR 344

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN +I GY QN    EA+ LF ++L+ + I     TF + LSA + L +L LG+Q 
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLLSACANLADLLLGRQA 403

Query: 353 HAYIIKN------------FVALPVI--------------VLNAVIERDVVSWNTMISAF 386
           H +++K             FV   +I              V   + ERD VSWN +I  +
Sbjct: 404 HTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGY 463

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFE 445
            QNG   E L +  +M   G   D VT+  +L A S+    + G+     +  HG I  +
Sbjct: 464 AQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLK 523

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
              + ++D+  ++G +  A+ + E     + D   W +++A    +G +E    A  ++L
Sbjct: 524 DHYTCMVDLLGRAGCLNEAKNLIEAMPV-NPDAVVWGSLLAACKVHGNIEMGKHAAEKLL 582

Query: 506 E 506
           E
Sbjct: 583 E 583



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 43/235 (18%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY------------ 558
           PN    A +L +C    +    + +H   +       +F+   LID+Y            
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 559 -------------------SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
                              +KSG ++ AA +F  +PE +  ++ +M+ G+ QH   E +L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVD--EGLQIFDLMQQEYKIQPSTEHYCCVA 657
             F  M       +  +F + LSAC  AGL+D   G Q+  L+    K + ST+ Y   A
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGTQVHALVS---KSRYSTDVYMGSA 187

Query: 658 --DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG-HSELAEVVAKKL 709
             DM  + G V  A E    + E    L  W SL+     +G  SE  EV  + +
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERN--LVTWNSLITCYEQNGPASEALEVFVRMM 240


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 231/787 (29%), Positives = 401/787 (50%), Gaps = 102/787 (12%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + L      G   +A++LFD++     V WN++I G++ N    + I ++
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            QM +    T  D  T++ VLK+C+   +   G  +H   ++   +      ++LL+MY+
Sbjct: 163 LQMGRMG--TVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C                   K D   + F +M  +N V+W+ I++  V+ +     +  
Sbjct: 221 KC------------------KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLEL 262

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F+ M + G+  S  +F +VF + + L   +    ++G  +K  +++  D+ + ++ + MY
Sbjct: 263 FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALK--TDFGTDVVIGTATLDMY 320

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            +      A+K+F++    N + +N +I GY +++          + L LDE     V+ 
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD----------KGLGLDE-----VSL 365

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
             A  A + ++    G Q+H   +K+     + V NA+++                    
Sbjct: 366 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS 425

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD VSWN +I+A  QNG +++ L L        F+ + +  + L                
Sbjct: 426 RDAVSWNAIIAAHEQNGNEEKTLSL--------FIHNRIIKSRL---------------- 461

Query: 434 HAYLLRHGIHFEGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
                       G++S+    LIDMY+K G+++ A ++ ++    ++   +WNA+I+G++
Sbjct: 462 ------------GLDSFVGIALIDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFS 507

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
                EEA   F +MLE  V P+  T A++L  C  +  +ELGKQ+H   I+  L  + +
Sbjct: 508 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 567

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           + ++L+DMYSK G +     +F K P ++ VT+  M+ GY QHG+ E AL +F  M+   
Sbjct: 568 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 627

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           ++P+  TF+AVL AC + GLV++GL  F  M   Y + P  EHY CV D++GR G+V +A
Sbjct: 628 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 687

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            E ++ +  E + + IW +LL  C++HG+ E+AE  A  +L+++  +S    +VLLSNIY
Sbjct: 688 LELIEGMPFEADAV-IWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA--YVLLSNIY 744

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A  G W  V K+RK MR  GL+KE GCSWI++   V+ F   D+ HP+S +IYE L+ L 
Sbjct: 745 ANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLT 804

Query: 790 MEMRNAG 796
            EM+  G
Sbjct: 805 DEMKWVG 811



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 173/703 (24%), Positives = 303/703 (43%), Gaps = 91/703 (12%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS-----CDNYT 109
           PH +R LF     P    +N        +  P++ + +       SP++S         T
Sbjct: 3   PHTSRHLF-----PIRFFFN------FQSKSPFKTLPI-------SPFSSYQATPTKKKT 44

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD--------- 160
           +S + + C++ + L  GK  H   I     P+ FV N L+ MY  C S L+         
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKC-SDLEFAFKVFDGM 103

Query: 161 --AEMVGLKYVEVDYS---KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
              + V    +   Y+      +  K+FD M  R+VV+WN+++S Y+    + + +  F 
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M RMG      +F  V  + SSL D+     ++GL VK+G  +  D+   S+ + MYA+
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG--FDCDVVTGSALLDMYAK 221

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               D + + F +  E+N   W+ +I G VQN+     +ELF + ++   +     TF S
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE-MQKAGVGVSQSTFAS 280

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
              + + L  L LG QLH + +K      V++  A ++  +   N   +  + N L +  
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340

Query: 396 L------MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           L      ++ Y    +G  +D V+++    A + ++    G Q H   ++        + 
Sbjct: 341 LQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 400

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + ++DMY K G +  A  +FE+  S  RD  +WNA+IA + QNG  E+    F       
Sbjct: 401 NAILDMYGKCGALVEACLVFEEMVS--RDAVSWNAIIAAHEQNGNEEKTLSLF------- 451

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
                                     +H   I+  L  + FVG +LIDMYSK G++  A 
Sbjct: 452 --------------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAE 485

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +  ++ E+  V++  +I G+     SE A   F  M   G++PD  T+  +L  C+   
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545

Query: 629 LVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
            V+ G QI   ++++E  +Q        + DM  + G  ++ ++ + E     + +  W 
Sbjct: 546 TVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGN-MQDFQLIFEKAPNRDFV-TWN 601

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +++     HG   L E   K    M   N  P +   L+ + A
Sbjct: 602 AMVCGYAQHG---LGEEALKIFEYMQLENVKPNHATFLAVLRA 641


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 230/722 (31%), Positives = 389/722 (53%), Gaps = 53/722 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  +     V WN II G V N   + A+ L+ QM     +   +++T+SS+L AC
Sbjct: 201 ALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQM--CCRFFMPNSFTFSSILTAC 258

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L  G+ V    I+C +    FV  +++++Y+ C                     D
Sbjct: 259 AALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKC------------------RDMD 300

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F  M  RNVV+W TI+S +V+ +  + A   F+ M ++G + +  +  +V  A +
Sbjct: 301 QAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACT 360

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
                K A  ++  + K G  +  D  V+S+ I MY+++G  D + ++F      +N  +
Sbjct: 361 EPVMIKEAVQLHSWIFKTG--FYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAM 418

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  MI  + Q+     A+ELF ++L+  E +  D  F S+ S +S +  L LG+ +H YI
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQ--EGLRPD-KFCSS-SVLSIIDSLSLGRLIHCYI 474

Query: 357 IKN--FVALPV------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K   F  + V                   V   + ++D VSW +MI+ F ++   ++ +
Sbjct: 475 LKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAV 534

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMY 455
            L  EM  +    D +T+TA L+A S L + + GK+ H Y LR  +  E +    L++MY
Sbjct: 535 QLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMY 594

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K G I  AR++F+      +DQ + +++++GY QNG +E+A + F ++   ++  +  T
Sbjct: 595 SKCGAIVLARRVFDMLP--QKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFT 652

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           ++SV+ A   + ++++G QLH    +  L+  V VG+SL+ MYSK G I+    VF +I 
Sbjct: 653 VSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE 712

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           + + +++T MI+ Y QHG    AL ++  M+  G +PD++TFV VLSACS+ G+V+EG  
Sbjct: 713 KPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYS 772

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             + M +EY I+P   HY C+ D+LGR G++ EA  F+  +  E + L +WG LL +C++
Sbjct: 773 HLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDAL-LWGILLAACKV 831

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG  EL  + AK+++E++   +  G +V LSNI A+ G WE+V K+R  M   G++KE G
Sbjct: 832 HGDIELGRLAAKRVIELEPCEA--GAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPG 889

Query: 756 CS 757
            S
Sbjct: 890 WS 891



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 189/727 (25%), Positives = 344/727 (47%), Gaps = 76/727 (10%)

Query: 10  LPPPPP-----------TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLA 58
           LPP  P             T    ++   H L   I +  T    S +   C+      A
Sbjct: 41  LPPFDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHA 100

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCN-NLPYE-AILLYSQMKKSS--PYTSCDNYTYSSVL 114
            +LFD    P  + WN +I G  CN N  +E +   + +M+ S   P    + +TY SVL
Sbjct: 101 LRLFDKTPHPNVISWNILISG--CNQNFSFEDSWRNFCKMRFSGFDP----NQFTYGSVL 154

Query: 115 KACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            AC    +   G+ V+   ++   FSN   +V   ++++++   S  DA           
Sbjct: 155 SACTALGSPLYGELVYSLALKNGFFSNG--YVRAGMIDLFAKLCSFEDA----------- 201

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF  +   NVV WN I+S  VK      A+  F  M      P++ +F ++
Sbjct: 202 -------LRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A ++L + +    V G ++K G+    D+FV ++ I +YA+    D A K F     R
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAG--EDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIR 312

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W T+I G+VQ +  + A   F ++ ++ E + ++ T  S L+A ++   +    QL
Sbjct: 313 NVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKI-NNYTITSVLTACTEPVMIKEAVQL 371

Query: 353 HAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGL 391
           H++I K    L   V +A+I                      +++  W  MISAF Q+G 
Sbjct: 372 HSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGS 431

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
               + L   M ++G   D    +++LS   +L    +G+  H Y+L+ G+  +  + S 
Sbjct: 432 TGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSL---SLGRLIHCYILKIGLFTDISVGSS 488

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L  MY+K G ++ +  +FE+    D+D  +W +MI G++++   E+A   FR+ML   + 
Sbjct: 489 LFTMYSKCGSLEESYTVFEQMP--DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ +T+ + L AC+ + ++E GK++HG+++R  + + V VG +L++MYSK G I  A  V
Sbjct: 547 PDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRV 606

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +P+K+  + ++++ GY Q+G  E AL LF  ++   +  D+ T  +V+ A +    +
Sbjct: 607 FDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSL 666

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           D G Q+   + +   +         +  M  + G + E ++  +++ E+ +++  W +++
Sbjct: 667 DIGTQLHACVTK-MGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQI-EKPDLIS-WTAMI 723

Query: 691 GSCRLHG 697
            S   HG
Sbjct: 724 VSYAQHG 730


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/587 (34%), Positives = 324/587 (55%), Gaps = 33/587 (5%)

Query: 236 LSSLGDYKSADVVYGL--LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           L + G  K  +V   L  +V   +++ ND  + +  I MY+  G    +R +FD    +N
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN ++  Y +N    +A+ +F +++ + E   D+ T    + A + L +L LGQ +H
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 354 AYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLD 392
               K  +   V V NA+I                      + V SWN ++  + QN   
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMES 449
            + L L  +M   G   D  T+ +LL A S +++   G++ H + LR+G+    F G+  
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS- 350

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ +Y   G    A+ +F+  +   R   +WN MIAGY+QNGL +EA   FRQML   +
Sbjct: 351 -LLSLYICCGKPFAAQVLFDGMEH--RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P  + I  V  AC+ +  + LGK+LH F+++  L +++FV +S+IDMY+K G I  +  
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F ++ EK+  ++  +I GYG HG  + AL LF  M   G++PD  TF  +L ACS+AGL
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V++GL+ F+ M   + I+P  EHY CV DMLGR G++ +A   ++E+  + +   IW SL
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDS-RIWSSL 586

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L SCR+HG+  L E VA KLLE++     P  +VL+SN++A  G W++V +VR  M++ G
Sbjct: 587 LSSCRIHGNLGLGEKVANKLLELEPEK--PENYVLISNLFAGSGKWDDVRRVRGRMKDIG 644

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           L+K+ GCSWI+VGG V+ F   D+  P+  ++ E   RL +++ + G
Sbjct: 645 LQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIG 691



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 282/579 (48%), Gaps = 86/579 (14%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS-LLNMYSTCLSSLDAEMVGLKYVEV 171
           +L+AC + +++ +G+ +H          + FV N+ ++ MYS C S  D+ MV       
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMV------- 163

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                      FD +RR+N+  WN IVS Y + E + +A+  F  ++ +   +P   +  
Sbjct: 164 -----------FDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 212

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA-RKIFDNC 289
            V  A + L D     +++G+  K+  + V+D+FV ++ I MY + G  + A +++FD  
Sbjct: 213 CVIKACAGLLDLGLGQIIHGMATKM--DLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLM 270

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQLQELD 347
             +    WN ++ GY QN+ P +A++L++Q+ +  LD   F   T  S L A S+++ L 
Sbjct: 271 DTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWF---TIGSLLLACSRMKSLH 327

Query: 348 LGQQLHAYIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFV 387
            G+++H + ++N      F+ + +              ++ + +  R +VSWN MI+ + 
Sbjct: 328 YGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYS 387

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEG 446
           QNGL DE + L  +M   G     + +  +  A S L    +GK+ H + L+ H      
Sbjct: 388 QNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 447

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S +IDMYAK G I  +++IF++    ++D A+WN +IAGY  +G  +EA   F +ML 
Sbjct: 448 VSSSIIDMYAKGGCIGLSQRIFDR--LREKDVASWNVIIAGYGIHGRGKEALELFEKMLR 505

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  T   +L AC+  G +E G       + Y           +++++        
Sbjct: 506 LGLKPDDFTFTGILMACSHAGLVEDG-------LEYF--------NQMLNLH-------- 542

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
             N+  K+       YT ++   G+ G  + AL L   M G   +PD+  + ++LS+C  
Sbjct: 543 --NIEPKLEH-----YTCVVDMLGRAGRIDDALRLIEEMPG---DPDSRIWSSLLSSCRI 592

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
            G +  G ++ + + +    +P  E+Y  ++++    GK
Sbjct: 593 HGNLGLGEKVANKLLELEPEKP--ENYVLISNLFAGSGK 629



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 216/465 (46%), Gaps = 46/465 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +FD + R     WN I+  +  N L  +A+ ++S++   + +   DN+T   
Sbjct: 155 GSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKP-DNFTLPC 213

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KACA   +L +G+ +H    +       FV N+L+ MY  C         GL  VE  
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC---------GL--VE-- 260

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               + V +VFD M  + V +WN ++  Y +     +A+  +  M   G+ P   +  ++
Sbjct: 261 ----EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 316

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S +      + ++G  ++ G     D F+  S + +Y   G    A+ +FD    R
Sbjct: 317 LLACSRMKSLHYGEEIHGFALRNG--LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 374

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI GY QN  P EAI LF Q+L  D I   ++  +    A SQL  L LG++L
Sbjct: 375 SLVSWNVMIAGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCVCGACSQLSALRLGKEL 433

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H + +K  +   + V +++I                    E+DV SWN +I+ +  +G  
Sbjct: 434 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 493

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY- 450
            E L L  +M + G   D  T T +L A S+    + G +    +L  H I  + +E Y 
Sbjct: 494 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPK-LEHYT 552

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            ++DM  ++G I  A ++ E+   GD D   W+++++    +G L
Sbjct: 553 CVVDMLGRAGRIDDALRLIEEM-PGDPDSRIWSSLLSSCRIHGNL 596



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 198/412 (48%), Gaps = 42/412 (10%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           +++FD +   T   WN ++ G+  N+ P +A+ LY QM  S      D +T  S+L AC+
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG--LDPDWFTIGSLLLACS 321

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             ++L  G+ +H   +R       F+  SLL++Y  C     A++               
Sbjct: 322 RMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQV--------------- 366

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
              +FD M  R++V+WN +++ Y +     EA+  FR ML  GI+P  I+ + V  A S 
Sbjct: 367 ---LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 423

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L   +    ++   +K  +    D+FV+SS I MYA+ GC   +++IFD   E++   WN
Sbjct: 424 LSALRLGKELHCFALK--AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWN 481

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I GY  +    EA+ELF ++L L  +  DD TF   L A S           HA +++
Sbjct: 482 VIIAGYGIHGRGKEALELFEKMLRLG-LKPDDFTFTGILMACS-----------HAGLVE 529

Query: 359 NFVALPVIVLNA-VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           + +     +LN   IE  +  +  ++    + G  D+ L L+ EM       DS   ++L
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP---DSRIWSSL 586

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
           LS+     N  +G++    LL   +  E  E+Y++  +++A SG     R++
Sbjct: 587 LSSCRIHGNLGLGEKVANKLLE--LEPEKPENYVLISNLFAGSGKWDDVRRV 636


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 237/698 (33%), Positives = 370/698 (53%), Gaps = 59/698 (8%)

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNP-SRFVYNSLLN 150
           SQ    S +       Y S+L+ C   +++   K +H H I     S+P S  + +SL  
Sbjct: 5   SQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAA 64

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            Y+ C  +  A                   K+FD +R  ++ +WN ++  Y  +    +A
Sbjct: 65  AYAMCGCAPHAR------------------KLFDELRNPSLFSWNAMIRMYTNSGLSYDA 106

Query: 211 VRQFRMMLRMGIR-PSTISFVNVFPALSSLGDYKSADVVYGLLVK---LGSEYVNDLFVA 266
           +  F  ML  G R P   ++  V  A    GDY   ++  G L+    + S + +D FV 
Sbjct: 107 LGLFVQMLASGRRWPDNYTYPFVIKAC---GDYLLPEM--GALIHARTVMSGFDSDAFVQ 161

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MY   G  + AR++FD   ER    WNTMI GY +N    EA+ +F  ++    I
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIG-KGI 220

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             D  T +S L   S L+EL++G+++HA +    +   + V N++++             
Sbjct: 221 EPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQM 280

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  RDVVSW TM++ ++ NG     L+L   MQ +    + VT+ ++LSA ++L +
Sbjct: 281 IFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYS 340

Query: 427 QDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
              G+  H + +R  +  E + E+ LIDMYAK   +  + ++F K     +  A WNA+I
Sbjct: 341 LKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSK--XSKQRTAPWNAII 398

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +G   NGL  +A   F+QML   V PN  T+ S+LPA   + +++  + +HG+ IR    
Sbjct: 399 SGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFL 458

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS--VTYTTMILGYGQHGMSERALSLFR 603
             + V T LID+YSK G +  A N+F  IP+K+   +T++ +I GYG HG  E A+SLF 
Sbjct: 459 SRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFD 518

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G++P+ ITF ++L ACS+AGLVDEGL +F  M ++ ++   T+HY CV D+LGR 
Sbjct: 519 QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRA 578

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EAYE ++ +    N   +WG+LLGSC +H + EL EV AK L E++  N+  G +V
Sbjct: 579 GRLEEAYELIRTMAFRPN-HAVWGALLGSCVIHENVELGEVAAKWLFELEPGNT--GNYV 635

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           LL+NIY+  G W + + VR  M   GLRK    S I+V
Sbjct: 636 LLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 193/683 (28%), Positives = 318/683 (46%), Gaps = 90/683 (13%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQE-----GRPHLARQLFDSITRPTT 70
           T+    P   QIH+ +  +  L +P     LS +          PH AR+LFD +  P+ 
Sbjct: 29  TSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPH-ARKLFDELRNPSL 87

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
             WN +I  +  + L Y+A+ L+ QM  S      DNYTY  V+KAC +     +G  +H
Sbjct: 88  FSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWP-DNYTYPFVIKACGDYLLPEMGALIH 146

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
              +    +   FV NSL+ MY  C      EM             ++  +VFD MR R 
Sbjct: 147 ARTVMSGFDSDAFVQNSLMAMYMNC-----GEM-------------EVARRVFDLMRERT 188

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +V+WNT+++ Y K     EA+  F  M+  GI P   + V+V P  S L + +    V+ 
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHA 248

Query: 251 LL-VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           L+ VK   E   D+ V +S + MYA+ G  D A+ IF    +R+   W TM+ GY+ N  
Sbjct: 249 LVEVKNLGE---DISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD 305

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A+ L  Q+++ + +  + VT  S LSA + L  L  G+ LH + I+  +   VIV  
Sbjct: 306 ARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVET 364

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           A+I+                    +    WN +IS  + NGL  + + L  +M  +    
Sbjct: 365 ALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDP 424

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIF 468
           +  T+ +LL A + L +    +  H YL+R G +    + + LID+Y+K G +++A  IF
Sbjct: 425 NDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIF 484

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                 D+D  TW+A+IAGY  +G  E A   F QM++  V PN +T  S+L AC+  G 
Sbjct: 485 NGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGL 544

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++ G  L     +++L+ N                               +  YT +I  
Sbjct: 545 VDEGLGL----FKFMLEDNQM--------------------------SLRTDHYTCVIDL 574

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE-YKIQ 647
            G+ G  E A  L R+M      P+   + A+L +C    ++ E +++ ++  +  ++++
Sbjct: 575 LGRAGRLEEAYELIRTM---AFRPNHAVWGALLGSC----VIHENVELGEVAAKWLFELE 627

Query: 648 P-STEHYCCVADMLGRVGKVVEA 669
           P +T +Y  +A++   VG+  +A
Sbjct: 628 PGNTGNYVLLANIYSAVGRWRDA 650


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 216/650 (33%), Positives = 347/650 (53%), Gaps = 33/650 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD+M +R+VV W  ++  Y +  R++EA   F  M R G+ P  I+   +    +    
Sbjct: 95  LFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFES 154

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+G +VK+G  Y + L V +S +  Y +      A  +F +  E++   +N ++
Sbjct: 155 VNEVAQVHGHVVKVG--YDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALL 212

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +     +AI LF ++ +L      + TF + L+A  Q+ +++ GQQ+H++++K   
Sbjct: 213 TGYSKEGFNHDAINLFFKMQDLG-FRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNF 271

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              V V NA++                    E D +S+N +I+    NG  +E L L  E
Sbjct: 272 VWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRE 331

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKSGL 460
           +Q   F         LLS A+N  N ++G+Q H+  ++   I    + + L+DMYAK   
Sbjct: 332 LQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDK 391

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
              A +IF   D   +    W A+I+GY Q GL E+    F +M    +  +  T AS+L
Sbjct: 392 FGEANRIFA--DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASIL 449

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  + ++ LGKQLH   IR     NVF G++L+DMY+K G I  A  +F ++P +NSV
Sbjct: 450 RACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSV 509

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++  +I  Y Q+G    AL  F  M   G++P++++F+++L ACS+ GLV+EGLQ F+ M
Sbjct: 510 SWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSM 569

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            Q YK++P  EHY  + DML R G+  EA + +  +  E + + +W S+L SCR+H + E
Sbjct: 570 TQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI-MWSSILNSCRIHKNQE 628

Query: 701 LAEVVAKKLLEMD-TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           LA   A +L  M   R++ P  +V +SNIYA  G W++V KV+K +RERG+RK    SW+
Sbjct: 629 LAIKAADQLFNMKGLRDAAP--YVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWV 686

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK---TIQNSNVD 806
           ++    + F++ D  HPQ+ +I   L+ L  +M   G K   T    NVD
Sbjct: 687 EIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVD 736



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 173/612 (28%), Positives = 289/612 (47%), Gaps = 64/612 (10%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    AR LFDS+ + + V W  +I G+  +N   EA  L++ M +       D+ T 
Sbjct: 85  KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVP--DHITL 142

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +++L    E  ++     VH H ++   + +  V NSLL+ Y    S             
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS------------- 189

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                  L C +F  M  ++ V +N +++ Y K     +A+  F  M  +G RPS  +F 
Sbjct: 190 -----LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFA 244

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V  A   + D +    V+  +VK    +V ++FVA++ +  Y++      ARK+F    
Sbjct: 245 AVLTAGIQMDDIEFGQQVHSFVVKCN--FVWNVFVANALLDFYSKHDRIVEARKLFYEMP 302

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
           E +   +N +I     N    E++ELF  +Q    D   F    F + LS  +    L++
Sbjct: 303 EVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQF---PFATLLSIAANSLNLEM 359

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G+Q+H+  I       V+V N++++                    +  V W  +IS +VQ
Sbjct: 360 GRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQ 419

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FE 445
            GL ++GL L  EM +     DS T  ++L A +NL +  +GKQ H+ ++R G     F 
Sbjct: 420 KGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFS 479

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           G  S L+DMYAK G IK A Q+F++     R+  +WNA+I+ Y QNG    A  +F QM+
Sbjct: 480 G--SALVDMYAKCGSIKEALQMFQEMPV--RNSVSWNALISAYAQNGDGGHALRSFEQMI 535

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              + PN V+  S+L AC+  G +E G Q  +  +  Y L+       S++DM  +SG  
Sbjct: 536 HSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRF 595

Query: 565 NYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALS----LFRSMKGCGIEPDAITFVA 619
           + A  + A++P E + + +++++     H   E A+     LF +MKG     DA  +V+
Sbjct: 596 DEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLF-NMKGL---RDAAPYVS 651

Query: 620 VLSACSYAGLVD 631
           + +  + AG  D
Sbjct: 652 MSNIYAAAGEWD 663



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 237/498 (47%), Gaps = 35/498 (7%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAE 275
           M++ G  P+T  F          GD  +A        KL  E  +   ++++ + M Y +
Sbjct: 33  MIKTGFDPNTCRFNFQVQTHLQRGDLGAAR-------KLFDEMPHKNVISTNTMIMGYLK 85

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    AR +FD+ ++R+   W  +IGGY Q+N  +EA  LF  +     +V D +T  +
Sbjct: 86  SGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCR-HGMVPDHITLAT 144

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            LS  ++ + ++   Q+H +++K      ++V N+++                    E+D
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            V++N +++ + + G + + + L ++MQ  GF     T  A+L+A   + + + G+Q H+
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           ++++    +   + + L+D Y+K   I  AR++F   +  + D  ++N +I     NG +
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFY--EMPEVDGISYNVLITCCAWNGRV 322

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EE+   FR++            A++L       N+E+G+Q+H  +I       V VG SL
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +DMY+K      A  +FA +  ++SV +T +I GY Q G+ E  L LF  M    I  D+
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
            T+ ++L AC+    +  G Q+   + +   +         V DM  + G + EA +  +
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALV-DMYAKCGSIKEALQMFQ 501

Query: 675 ELGEEGNVLEIWGSLLGS 692
           E+    +V   W +L+ +
Sbjct: 502 EMPVRNSV--SWNALISA 517



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 209/470 (44%), Gaps = 58/470 (12%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+     LA  LF  +     V +N ++ G+      ++AI L+ +M+      
Sbjct: 179 SLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRP 238

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T+++VL A  +  ++  G+ VH   ++C    + FV N+LL+ YS     ++A  
Sbjct: 239 S--EFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARK 296

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR--QFRMMLRMG 221
           +  +  EVD   Y+++                T  +W  + E  +E  R  QF    R  
Sbjct: 297 LFYEMPEVDGISYNVLI---------------TCCAWNGRVEESLELFRELQFTRFDRRQ 341

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
              +T+  +    A +SL       +    +V   ++ ++++ V +S + MYA+   F  
Sbjct: 342 FPFATLLSI----AANSLNLEMGRQIHSQAIV---TDAISEVLVGNSLVDMYAKCDKFGE 394

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A +IF +   +++  W  +I GYVQ     + ++LFV+ +   +I  D  T+ S L A +
Sbjct: 395 ANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVE-MHRAKIGADSATYASILRACA 453

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L LG+QLH+ II++     V   +A+++                    R+ VSWN 
Sbjct: 454 NLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNA 513

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ-----THAY 436
           +ISA+ QNG     L    +M   G   +SV+  ++L A S+    + G Q     T  Y
Sbjct: 514 LISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVY 573

Query: 437 LLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            L     H+  M    +DM  +SG    A ++  +    + D+  W++++
Sbjct: 574 KLEPRREHYASM----VDMLCRSGRFDEAEKLMARM-PFEPDEIMWSSIL 618


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 227/716 (31%), Positives = 380/716 (53%), Gaps = 48/716 (6%)

Query: 103 TSCDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           ++ D+++Y+ +L+         I GK +HCH ++  ++   F  N LLN Y    S  DA
Sbjct: 30  SALDSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDA 89

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              K+FD M + N +++ T+   Y +  ++ +A+     + + G
Sbjct: 90  S------------------KLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEG 131

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
              +   F  +   L S+        ++  + KLG     D FV ++ I  Y+  G  D 
Sbjct: 132 HEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHH--ADAFVGTALIDAYSVRGNVDV 189

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD+   ++   W  M+  Y +N    E+++LF Q + +     ++ T   AL +  
Sbjct: 190 ARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQ-MRIMGYKPNNFTISGALKSCL 248

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVIVLNA--------------VIERDVVSWNT 381
            L+  ++G+ +H   +K       FV + ++ L A              + + D++ W+ 
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSL 308

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI+ + Q+    E L L   M++   + ++ T  ++L A ++  + D+GKQ H+ +L+ G
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG 368

Query: 442 IHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           ++     S  ++D+YAK G I+ + ++FE  +  DR+  TWN +I GY Q G  E A   
Sbjct: 369 LNSNVFVSNAIMDVYAKCGEIENSMKLFE--ELPDRNDVTWNTIIVGYVQLGDGERAMNL 426

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F  MLEH++ P  VT +SVL A   +  +E G Q+H  +I+ + +++  V  SLIDMY+K
Sbjct: 427 FTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAK 486

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G IN A   F K+ +++ V++  MI GY  HGMS  AL+LF  M+    +P+ +TFV V
Sbjct: 487 CGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGV 546

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACS AGL+ +G   F+ M ++Y I+P  EHY C+  +LGR+G+  EA + + E+  + 
Sbjct: 547 LSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQP 606

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +V+ +W +LLG+C +H   +L  V A+ +LEM+  +     HVLLSN+YA  G W+NV  
Sbjct: 607 SVM-VWRALLGACVIHKKVDLGRVCAQHVLEMEPHDD--ATHVLLSNMYATAGRWDNVAF 663

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           VRK M+++ +RKE G SW++  G V+ F+  D  HP    I  MLE L  + R+AG
Sbjct: 664 VRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAG 719



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 196/420 (46%), Gaps = 61/420 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTSCDNYT 109
            G   +AR +FD I     V W  ++  +  N    E++ L++QM+     P    +N+T
Sbjct: 184 RGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP----NNFT 239

Query: 110 YSSVLKACAETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
            S  LK+C       +GK+VH C    C+ +   FV  +LL +Y+     +DA+      
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYDH-DLFVGIALLELYAKSGEIIDAQ------ 292

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       ++F+ M + +++ W+ +++ Y +++R  EA+  F  M +  + P+  +
Sbjct: 293 ------------RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFT 340

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A +S         ++  ++K G    +++FV+++ + +YA+ G  + + K+F+ 
Sbjct: 341 FASVLQACASSVSLDLGKQIHSCVLKFGLN--SNVFVSNAIMDVYAKCGEIENSMKLFEE 398

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +RN   WNT+I GYVQ      A+ LF  +LE D +   +VT+ S L A + L  L+ 
Sbjct: 399 LPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHD-MQPTEVTYSSVLRASASLAALEP 457

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G Q+H+  IK       +V N++I+                    RD VSWN MI  +  
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGM 447
           +G+  E L L   MQ      + +T   +LSA SN           A LL  G  HFE M
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSN-----------AGLLYKGQAHFESM 566



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 36/254 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF+ +     V WNTII+G+V       A+ L++ M +     +    TYSSVL+A A 
Sbjct: 394 KLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPT--EVTYSSVLRASAS 451

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L  G  +H   I+   N    V NSL++MY+ C    DA +                
Sbjct: 452 LAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARL---------------- 495

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
              FD M +R+ V+WN ++  Y      +EA+  F MM     +P+ ++FV V  A S+ 
Sbjct: 496 --TFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNA 553

Query: 240 G-------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN-CLE 291
           G        ++S    Y   +K   E+       +  +++   LG FD A K+      +
Sbjct: 554 GLLYKGQAHFESMSKDYD--IKPCIEHY------TCMVWLLGRLGRFDEAMKLIGEIAYQ 605

Query: 292 RNTEVWNTMIGGYV 305
            +  VW  ++G  V
Sbjct: 606 PSVMVWRALLGACV 619



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 26  QIHSLS-PPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIHSL+   +    T    S +    + GR + AR  FD + +   V WN +I G+  + 
Sbjct: 460 QIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519

Query: 85  LPYEAILLYSQMKKSSPYTSC--DNYTYSSVLKACAETRNLRIGKAVHCHF 133
           +  EA+ L+  M+    +T C  +  T+  VL AC+    L  G+A   HF
Sbjct: 520 MSMEALNLFDMMQ----HTDCKPNKLTFVGVLSACSNAGLLYKGQA---HF 563


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 213/629 (33%), Positives = 345/629 (54%), Gaps = 39/629 (6%)

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+      L+ G+   +  +V V        D  +A  V+  ++K  S    +  V ++
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIK--SRMEQNAHVMNN 68

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + +Y E G    AR +FD  ++++   WN MI GYV++ H  +A+ LF ++   + +  
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCH-EGVQP 127

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           +  T++  L A + L  L  G+++HA I    +   V V  A++                
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIF 187

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                 D++SW  MI A+ Q+G   E   L+ +M+++GF  +++T  ++L+A ++     
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
             K+ H + L  G+  +  + + L+ MYAKSG I  AR +F++     RD  +WN MI  
Sbjct: 248 WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKV--RDVVSWNVMIGA 305

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           + ++G   EA+  F QM      P+ +   S+L AC   G +E  K++H  ++   L+ +
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           V VGT+L+ MYSKSG I+ A  VF ++  +N V++  MI G  QHG+ + AL +FR M  
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
            G++PD +TFVAVLSACS+AGLVDEG   +  M Q Y I+P   H  C+ D+LGR G+++
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSN 727
           EA  F+  +  + +    WG+LLGSCR +G+ EL E+VAK+ L++D +N+    +VLLSN
Sbjct: 486 EAKLFIDNMAVDPDE-ATWGALLGSCRTYGNVELGELVAKERLKLDPKNAAT--YVLLSN 542

Query: 728 IYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLER 787
           IYAE G W+ V  VR  MRERG+RKE G SWI+V   ++ F   D  HP+  +I E  ++
Sbjct: 543 IYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDK 602

Query: 788 LAMEMRNAG----------NKTIQNSNVD 806
           +  +++  G          NK +++  +D
Sbjct: 603 VIEKIKAEGYIPDTRLVLKNKNMKDKELD 631



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 253/502 (50%), Gaps = 48/502 (9%)

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N L    ++L +++++       D++ Y  VLK C + ++L   K VH   I+     + 
Sbjct: 7   NTLSEAIVVLMNRLQRG---LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNA 63

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V N+LL++Y  C    +A  V                  FD + +++  +WN +++ YV
Sbjct: 64  HVMNNLLHVYIECGRLQEARCV------------------FDALVKKSGASWNAMIAGYV 105

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           + +   +A+R FR M   G++P+  +++ +  A +SL   K    V+  +   G E  +D
Sbjct: 106 EHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLE--SD 163

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           + V ++ + MY + G  + AR+IFDN +  +   W  MIG Y Q+ +  EA  L +Q +E
Sbjct: 164 VRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQ-ME 222

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
            +    + +T++S L+A +    L   +++H + +   + L V V  A+++         
Sbjct: 223 QEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSID 282

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      RDVVSWN MI AF ++G   E   L  +MQ +G   D++   ++L+A +
Sbjct: 283 DARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACA 342

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           +    +  K+ H + L  G+  +  + + L+ MY+KSG I  AR +F++     R+  +W
Sbjct: 343 SAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKV--RNVVSW 400

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK-QLHGFSI 540
           NAMI+G  Q+GL ++A   FR+M  H V P+ VT  +VL AC+  G ++ G+ Q    + 
Sbjct: 401 NAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQ 460

Query: 541 RYLLDQNVFVGTSLIDMYSKSG 562
            Y ++ +V     ++D+  ++G
Sbjct: 461 VYGIEPDVSHCNCMVDLLGRAG 482



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 224/476 (47%), Gaps = 46/476 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR +FD++ + +   WN +I G+V +    +A+ L+ +M       +    TY  
Sbjct: 77  GRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG--TYMI 134

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKACA    L+ GK VH             V  +LL MY  C S  +A           
Sbjct: 135 ILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR---------- 184

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++FD +   ++++W  ++  Y ++    EA R    M + G +P+ I++V++
Sbjct: 185 --------RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSI 236

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +S G  K    V+   +  G E   D+ V ++ + MYA+ G  D AR +FD    R
Sbjct: 237 LNACASEGALKWVKRVHRHALDAGLEL--DVRVGTALVQMYAKSGSIDDARVVFDRMKVR 294

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MIG + ++    EA +LF+Q ++ +    D + FLS L+A +    L+  +++
Sbjct: 295 DVVSWNVMIGAFAEHGRGHEAYDLFLQ-MQTEGCKPDAIMFLSILNACASAGALEWVKKI 353

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H + + + + + V V  A++                     R+VVSWN MIS   Q+GL 
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLG 413

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME-SY 450
            + L +   M   G   D VT  A+LSA S+    D G+  +  + + +GI  +    + 
Sbjct: 414 QDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNC 473

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++D+  ++G +  A+ +F  N + D D+ATW A++      G +E   +  ++ L+
Sbjct: 474 MVDLLGRAGRLMEAK-LFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLK 528



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 14/266 (5%)

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           L EA V     L+  +  +      VL  C    ++   KQ+H   I+  ++QN  V  +
Sbjct: 9   LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L+ +Y + G +  A  VF  + +K+  ++  MI GY +H  +E A+ LFR M   G++P+
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQ---EYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           A T++ +L AC+    +  G ++   ++    E  ++  T     +  M G+ G + EA 
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGT----ALLRMYGKCGSINEAR 184

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG--YHVLLSNI 728
                L     +   W  ++G+    G+ + A    + +L+M+     P    +V + N 
Sbjct: 185 RIFDNLMNHDII--SWTVMIGAYAQSGNGKEA---YRLMLQMEQEGFKPNAITYVSILNA 239

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEV 754
            A EG  + V +V +   + GL  +V
Sbjct: 240 CASEGALKWVKRVHRHALDAGLELDV 265


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 237/773 (30%), Positives = 398/773 (51%), Gaps = 51/773 (6%)

Query: 46  LSKICQEG-RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           L  +C +  R   AR +FD +     + W++++  +       EA++++  +++ S    
Sbjct: 68  LINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSG-EH 126

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            + +  +SV++AC +   +  G  +H   +R   +   +V  SL++ YS   +  +A +V
Sbjct: 127 PNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLV 186

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                             FD +  +  V W TI++ Y K  R   ++  F  M    + P
Sbjct: 187 ------------------FDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
                 +V  A S L   +    ++  +++ G+E   D+ V +  I  Y +       RK
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM--DVSVVNVLIDFYTKCNRVKAGRK 286

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD  + +N   W TMI GY+QN+   EA++LF ++  L     D     S L++    +
Sbjct: 287 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKP-DGFACTSVLTSCGSRE 345

Query: 345 ELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMIS 384
            L+ G+Q+HAY IK       FV   +I              V + + E++V+S+N MI 
Sbjct: 346 ALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIE 405

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +       E L L +EM+ + F    +T  +LL  +++L   ++ KQ H  +++ G+  
Sbjct: 406 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSL 465

Query: 445 EGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +    S LID+Y+K   +K AR +FE+ +  ++D   WNAM  GYTQ+   EEA   +  
Sbjct: 466 DLFAGSALIDVYSKCSYVKDARHVFEEMN--EKDIVVWNAMFFGYTQHLENEEALKLYST 523

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           +      PN  T A+++ A + + ++  G+Q H   ++  LD   FV  +L+DMY+K G 
Sbjct: 524 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 583

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I  A  +F     ++ V + +MI  + QHG +E AL +FR M   GI+P+ +TFVAVLSA
Sbjct: 584 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 643

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+AG V++GL  F+ M   + I+P TEHY CV  +LGR GK+ EA EF++++  E   +
Sbjct: 644 CSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 702

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +W SLL +CR+ G+ EL +  A+  +  D ++S  G ++LLSNI+A +G W +V KVR 
Sbjct: 703 -VWRSLLSACRIAGNVELGKYAAEMAISTDPKDS--GSYILLSNIFASKGMWADVKKVRD 759

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M    + KE G SWI+V   VN F ++D  H ++  I  +L+ L   ++ AG
Sbjct: 760 RMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA-DIGSVLDILIQHIKGAG 811



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 239/504 (47%), Gaps = 32/504 (6%)

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP    F N+     S        +++G ++  G +  +D F+A+  I + ++    D 
Sbjct: 23  LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ--SDTFLANILINVCSKSDRVDN 80

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD    +N   W++M+  Y Q  +  EA+ +FV +        ++    S + A +
Sbjct: 81  ARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACT 140

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNT 381
           QL  ++ G QLH +++++      +V   +I              V + + E+  V+W T
Sbjct: 141 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTT 200

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+ + + G     L L  +M++   + D   V+++LSA S L   + GKQ HAY+LR G
Sbjct: 201 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + + LID Y K   +K  R++F++     ++  +W  MI+GY QN    EA   
Sbjct: 261 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVV--KNIISWTTMISGYMQNSFDWEAMKL 318

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M      P+     SVL +C     +E G+Q+H ++I+  L+ + FV   LIDMY+K
Sbjct: 319 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 378

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           S ++  A  VF  + E+N ++Y  MI GY        AL LF  M+     P  +TFV++
Sbjct: 379 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSL 438

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGE 678
           L   +    ++   QI  L+    K   S + +   A  D+  +   V +A    +E+ E
Sbjct: 439 LGVSASLFALELSKQIHGLI---IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNE 495

Query: 679 EGNVLEIWGSLLGSCRLHGHSELA 702
           +  V  +W ++      H  +E A
Sbjct: 496 KDIV--VWNAMFFGYTQHLENEEA 517



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 19/205 (9%)

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K +HG  I   L  + F+   LI++ SKS  ++ A  VF K+P KN +T+++M+  Y Q 
Sbjct: 47  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 106

Query: 593 GMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM-----QQEYKI 646
           G SE AL +F  + +  G  P+     +V+ AC+  G+V++G Q+   +      Q+  +
Sbjct: 107 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 166

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVV 705
             S      + D   + G + EA     +L E+  V   W +++      G S ++ E+ 
Sbjct: 167 GTS------LIDFYSKNGNIEEARLVFDQLSEKTAV--TWTTIIAGYTKCGRSAVSLELF 218

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYA 730
           A    +M   N +P  +V+ S + A
Sbjct: 219 A----QMRETNVVPDRYVVSSVLSA 239


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 212/640 (33%), Positives = 338/640 (52%), Gaps = 93/640 (14%)

Query: 255  LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            L S +V + F+ ++ +  YA LG    AR++FD     NT  +N ++  + +   P +A 
Sbjct: 787  LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 315  E------------------------------LFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
                                           LF+  +  D+ V +  +F SALSA +  +
Sbjct: 847  ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906

Query: 345  ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            +   G Q+HA + K+  A  V + +A++                    ER++VSWN++I+
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966

Query: 385  AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
             + QNG   E L+L   M K GF+ D VT+ +++SA + L     G+Q HA +++     
Sbjct: 967  CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026

Query: 445  EGM--ESYLIDMYAKSGLIKTARQIFEKNDSG---------------------------- 474
            E M   + L+DMYAK G  + AR +F++  S                             
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086

Query: 475  -DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             +++   WN +IA Y QNG  EEA   F ++   +V P   T  +VL AC  + +++LG+
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146

Query: 534  QLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            Q H      GF   +  + +VFVG SL+DMY K+G I+  A VF ++  +++V++  MI+
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206

Query: 588  GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            G+ Q+G ++ AL LF  M      PD++T + VLSAC ++GLV+EG + F  M +++ I 
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGII 1266

Query: 648  PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
            PS +HY C+ D+LGR G + E  E +KE+  E + + +W SLLGSCRLH + E+ E  A 
Sbjct: 1267 PSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAV-LWASLLGSCRLHKNVEMGEWAAG 1325

Query: 708  KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            KL E+D RNS P  +VLLSN+YAE G W +V +VR  M+ RG+ K+ GCSWI++G  V+ 
Sbjct: 1326 KLFELDPRNSGP--YVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSV 1383

Query: 768  FASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDA 807
            F ++D  HP  ++I+ +L  + M+M      ++ + N D 
Sbjct: 1384 FLARDNGHPCKNEIHAILRIIQMQMSRV---SVDSENADG 1420



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 292/618 (47%), Gaps = 78/618 (12%)

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           F++N  +   + C S  DA                   ++FD M  R+  +WN I++   
Sbjct: 86  FLFNRAIESLAACGSVADAR------------------ELFDLMPLRDGGSWNAIITASS 127

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     EA+  F  M  +GIRP   +  +V    +   D   A  ++G + K   ++ ++
Sbjct: 128 RAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAK--RDFQSN 185

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           + + ++ + +Y        AR+ FD+ LE N   WN ++  Y        A+++F ++L 
Sbjct: 186 VILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLS 245

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------------------------ 358
              +     T   A+ A      L+ G+ +HA++++                        
Sbjct: 246 AG-VRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMD 304

Query: 359 ------NFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGL 391
                 N   +  +V++  I                     ER++VSWN M++ ++++ +
Sbjct: 305 AAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRS-M 363

Query: 392 DDEGLMLVYE-MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
           D  G +L+++ M+++    D++T+ ++LSA + + +   G++ HA+ ++ G      +++
Sbjct: 364 DLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKN 423

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ MY+K G +++A ++       +RD  +WN++I+GY ++ + E A  A  +M +  V
Sbjct: 424 ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEV 482

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           TPN  T +S L AC  +  ++ G Q+H + IR   + +  + + LIDMY K    +Y+  
Sbjct: 483 TPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIR 542

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F   P ++ + + +MI G    G  E  L LF  M+  GI+ D++TF+  L +C   G 
Sbjct: 543 IFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGH 602

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V  G   F LM  E  I P  EHY C+ ++LG+ G +VE  +FV+ +  E     +W  +
Sbjct: 603 VRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTT-AMWLRI 660

Query: 690 LGSCRLHGHSELAEVVAK 707
              CR +G+ +L E  AK
Sbjct: 661 FDCCREYGNRKLGERAAK 678



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 152/604 (25%), Positives = 259/604 (42%), Gaps = 94/604 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +       WN II        P EA+ L+S M  +S      + T +SVL  C
Sbjct: 104 ARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNM--NSLGIRPKDATMASVLSCC 161

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  +L   + +H H  +     +  +  +L+++Y  C    DA                
Sbjct: 162 AECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADAR--------------- 206

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              + FD +   N ++WN IV  Y        AV  F  ML  G+RP   +  +   A  
Sbjct: 207 ---RAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACR 263

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF---------------- 281
                +    ++  +++ G  Y + + V SS + MYA+ G  D                 
Sbjct: 264 DNNALEEGRCIHAFVLRHG--YEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMS 321

Query: 282 ---------------ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
                          A+++F+   ERN   WN M+ GY+++     A+ LF Q+ + +  
Sbjct: 322 TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQ-ETR 380

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVI------------- 372
            FD +T  S LSA + + ++  G+++HA+ IK  F + P I+ NA++             
Sbjct: 381 EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSP-ILKNALVRMYSKCGCLRSAE 439

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                    ERD  SWN++IS + ++ + +  L  + +MQ +    +  T ++ L+A +N
Sbjct: 440 RLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACAN 498

Query: 424 LRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           +     G Q HAY++R G   +  + S LIDMY K      + +IFE   S  RD   WN
Sbjct: 499 IFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPS--RDVILWN 556

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +MI G   +G  E     F +M +  +  + VT    L +C   G++ LG+    F++  
Sbjct: 557 SMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSY--FTL-- 612

Query: 543 LLDQNVFVGTS----LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG----YGQHGM 594
           ++D+++         +I++  K G +    +    +P + +      I      YG   +
Sbjct: 613 MMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKL 672

Query: 595 SERA 598
            ERA
Sbjct: 673 GERA 676



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 233/572 (40%), Gaps = 113/572 (19%)

Query: 23   QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
            +LP    +   IP   T +  + LS   + GRP  AR LF +I  P    +N +I     
Sbjct: 810  RLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQ 869

Query: 83   NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
            ++   +A+L  + M         + Y+++S L ACA  ++ R G  VH    +       
Sbjct: 870  HSRGADALLFLAAMHADDFVL--NAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDV 927

Query: 143  FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            ++ ++LL+MY+ C    +A                   +VF+ M  RN+V+WN++++ Y 
Sbjct: 928  YIGSALLDMYAKCEWPEEAR------------------RVFEAMPERNIVSWNSLITCYE 969

Query: 203  KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
            +     EA+  F  M++ G  P  ++  +V  A + L   +    V+  +VK    +  D
Sbjct: 970  QNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVK-SDRFRED 1028

Query: 263  LFVASSAIFMYAELGCFDFARKIFD-------------------------------NCLE 291
            + ++++ + MYA+ G    AR +FD                                 +E
Sbjct: 1029 MVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVE 1088

Query: 292  RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +N   WN +I  Y QN    EA+ LFV+ L+ + +     T+ + L+A   + +L LGQQ
Sbjct: 1089 KNVIAWNVLIAAYAQNGEEEEALRLFVR-LKRESVWPTHYTYGNVLNACGNVADLQLGQQ 1147

Query: 352  LHAYIIKN------------FVALPVI--------------VLNAVIERDVVSWNTMISA 385
             H +++K             FV   ++              V   +  RD VSWN MI  
Sbjct: 1148 AHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVG 1207

Query: 386  FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
              QNG   + L L   M       DSVT+  +LSA             H+ L+  G    
Sbjct: 1208 HAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACG-----------HSGLVEEG---- 1252

Query: 446  GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                Y   M    G+I +              Q  +  MI    + G L+E     ++M 
Sbjct: 1253 --RRYFRSMTEDHGIIPS--------------QDHYTCMIDLLGRAGHLKEVEELIKEM- 1295

Query: 506  EHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              ++ P+ V  AS+L +C    N+E+G+   G
Sbjct: 1296 --SMEPDAVLWASLLGSCRLHKNVEMGEWAAG 1325



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 202/457 (44%), Gaps = 43/457 (9%)

Query: 26   QIHSLSPPIPKLKTPTIRSRLSKICQEGR-PHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
            Q+H+L    P  K   I S L  +  +   P  AR++F+++     V WN++I  +  N 
Sbjct: 913  QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972

Query: 85   LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF- 143
               EA++L+  M K+      D  T +SV+ ACA     R G+ VH   ++      RF 
Sbjct: 973  PVGEALVLFVSMMKAGFVP--DEVTLASVMSACAGLAADREGRQVHARVVK----SDRFR 1026

Query: 144  ----VYNSLLNMYSTCLSSLDAEMVGLKYVEVDY-SKYDLVCK------------VFDTM 186
                + N+L++MY+ C  +  A  V  +       S+  L+              VF  M
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086

Query: 187  RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
              +NV+AWN +++ Y +     EA+R F  + R  + P+  ++ NV  A  ++ D +   
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146

Query: 247  VVYGLLVKLGSEY----VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
              +  ++K G  +     +D+FV +S + MY + G  D   K+F+    R+   WN MI 
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206

Query: 303  GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            G+ QN    +A+ LF ++L   E   D VT +  LSA      ++ G++    + ++   
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESP-DSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGI 1265

Query: 363  LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
            +P         +D   +  MI    + G   E   L+ EM  +    D+V   +LL +  
Sbjct: 1266 IP--------SQD--HYTCMIDLLGRAGHLKEVEELIKEMSMEP---DAVLWASLLGSCR 1312

Query: 423  NLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
              +N ++G+     L        G    L +MYA+ G
Sbjct: 1313 LHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELG 1349



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 158/328 (48%), Gaps = 33/328 (10%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLP 86
           + +L+P    + + +I S L+     GR   A+++F+ +     V WN ++ G++ +   
Sbjct: 309 LFNLAPMKDMVMSTSIVSGLASC---GRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDL 365

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFV 144
             A+LL+ QM++ +     D  T  SVL AC    ++  G+ VH   I+C  FS+P   +
Sbjct: 366 TGALLLFQQMRQET--REFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSP--IL 421

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MYS C     AE + L                F+    R+  +WN+++S Y   
Sbjct: 422 KNALVRMYSKCGCLRSAERLLL----------------FEMGSERDSYSWNSLISGY--- 462

Query: 205 ERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           ER+  +      + +M   + P+  +F +   A +++   K    ++  +++ G E ++D
Sbjct: 463 ERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYE-IDD 521

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           + + S  I MY +   FD++ +IF+    R+  +WN+MI G   +      ++LF + ++
Sbjct: 522 I-LRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDE-MQ 579

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQ 350
              I  D VTFL AL +      + LG+
Sbjct: 580 KQGIKADSVTFLGALVSCISEGHVRLGR 607


>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 849

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 226/814 (27%), Positives = 411/814 (50%), Gaps = 84/814 (10%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK- 97
           T   +S L+   +  R    +++F  +     V+WN ++ G   +    E +  +  M  
Sbjct: 56  TEVSKSVLNMYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSVS-CGRETMRFFKAMHF 114

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
              P  S  + T++ +L  C    +   GK++H + I+        V N+L++MY+    
Sbjct: 115 ADEPKPS--SVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAK--- 169

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                     Y+  D          FD +  ++VV+WN I++ + + +   +A R F +M
Sbjct: 170 --------FGYIIPD------AFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLM 215

Query: 218 LRMGIRPSTISFVNVFPALSSLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           L+    P+  +  NV P  +S+G    Y+S   ++  +V+  S     +FV +S +  Y 
Sbjct: 216 LKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQ-RSWLQTHVFVCNSLVSFYL 274

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
            +G  + A  +F     ++   WN +I GY  N+  ++A++LF  +++  ++  D VT L
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTIL 334

Query: 335 SALSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVIE-------------------- 373
           S L   +QL +L  G+++H+YI+++ ++     V NA+I                     
Sbjct: 335 SILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSM 394

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D++SWN ++ AF  +    + L L++ +  +   +DSVT+ +LL   +N++     K+ 
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEV 454

Query: 434 HAYLLRHGI-HFE---GMESYLIDMYAKSGLIKTARQIFEK-----------------ND 472
           H Y ++ G+ H E    + + L+D YAK G ++ A +IF+                   +
Sbjct: 455 HGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVN 514

Query: 473 SGDRDQA-------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           SG  D A             TW+ M+  Y ++    EA   FR++    + PN VTI ++
Sbjct: 515 SGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNL 574

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           LP C  + ++ L +Q HG+ IR  L      GT L+D+Y+K G + +A +VF     ++ 
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGRLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDL 633

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V +T M+ GY  HG  + AL +F  M    I+PD +    +L+AC +AGL+ +GLQI+D 
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTLLTACCHAGLIQDGLQIYDS 693

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           ++  + ++P+ E Y C  D+L R G++ +AY F+ ++  E N   IWG+LL +C  +   
Sbjct: 694 IRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNA-NIWGTLLRACTTYNRM 752

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L   VA  LL+ ++ ++  G HVL+SN+YA +  WE V ++R  M+++ ++K  GCSW+
Sbjct: 753 DLGHSVANHLLQAESDDT--GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 810

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           +V G  + F S D  HP+   I++++  L ++M+
Sbjct: 811 EVDGKRDVFVSGDCSHPRRDSIFDLVNALYLQMK 844



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 263/578 (45%), Gaps = 62/578 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  +  V+KACA    L  G+A+H    +        V  S+LNMY+ C    D +   
Sbjct: 20  DHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQ--- 76

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY-VKTERYVEAVRQFRMM-LRMGIR 223
                          K+F  M   + V WN +++   V   R  E +R F+ M      +
Sbjct: 77  ---------------KMFRQMDSVDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPK 119

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFDFA 282
           PS+++F  + P    LGD  +   ++  ++K G E   D  V ++ + MYA+ G     A
Sbjct: 120 PSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLE--KDTLVGNALVSMYAKFGYIIPDA 177

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVT-FLSALSAV 340
              FD+  +++   WN +I G+ +N    +A   F  +L E  E  +  +   L   +++
Sbjct: 178 FTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237

Query: 341 SQLQELDLGQQLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSW 379
            +      G+Q+H+Y++ ++++   V V N+++                     +D+VSW
Sbjct: 238 GKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297

Query: 380 NTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           N +I+ +  N    + L L + + QK    +DSVT+ ++L   + L +   GK+ H+Y+L
Sbjct: 298 NVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYIL 357

Query: 439 RHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           RH    E   + + LI  YA+ G    A   F       +D  +WNA++  +  +    +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSM--KDIISWNAILDAFADSPKQFQ 415

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV---FVGTS 553
                  +    +T + VTI S+L  C  +  I   K++HG+S++  L  N     +G +
Sbjct: 416 FLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNA 475

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           L+D Y+K G + YA  +F  + E+ + VTY +++ GY   G  + A  LF  M       
Sbjct: 476 LLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMS----TT 531

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
           D  T+  ++   + +   +E + +F  +Q    ++P+T
Sbjct: 532 DLTTWSLMVRIYAESCFPNEAIGVFREIQAR-GMRPNT 568


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 239/737 (32%), Positives = 369/737 (50%), Gaps = 101/737 (13%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN +I   +  N P  A+ L+ +MK  + + + D+YT+  V KAC E  N  +G ++H  
Sbjct: 94  WNQLIRHALHFNSPNTALRLFRRMK--TLHWTPDHYTFPFVFKACGEISNFELGASIHGC 151

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV- 191
            IR     + FV N++++MY  C + + A                   KVFD +  R + 
Sbjct: 152 VIRLGFESNVFVCNAVISMYGKCKAVVHAR------------------KVFDELCYRGIC 193

Query: 192 --VAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
             V WN+IVS Y        AV  FR M +  GI P T+  VN+ P    LG       V
Sbjct: 194 DSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQV 253

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +G  V+ G   V D+FV ++ + MYA+ G  + A K+F+    ++   WN M+ GY QN 
Sbjct: 254 HGFCVRSG--LVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 311

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              +A+ LF ++ E                                              
Sbjct: 312 RFEDALSLFGKMRE---------------------------------------------- 325

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
              IE DVV+W+++IS + Q G   E + +  +M       + VT+ +LLSA +++    
Sbjct: 326 -EKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALL 384

Query: 429 VGKQTHAYLLR---HGIHFEGMESY-----LIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            GK+TH Y ++    G H +  +       LIDMYAK   ++ AR +F++    DRD  T
Sbjct: 385 HGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVT 444

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           W  MI GY Q+G    A   F +M  +++ + PN  TI+ VL AC  +  ++ GKQ+H +
Sbjct: 445 WTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAY 504

Query: 539 SIRY-LLDQNV-FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            +R   +D +V FV   LIDMYSKSG ++ A  VF  + ++N+V++T+++ GYG HG SE
Sbjct: 505 VLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSE 564

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            A  +F  M+   +  D ITF+ VL ACS++G+             ++ + P  EHY C+
Sbjct: 565 DAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACM 611

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+LGR G++ EA   + ++  E   + +W +LL +CR+H + ELAE  AKKLLE+   N
Sbjct: 612 VDLLGRAGRLGEAMRLINDMPIEPTPV-VWIALLSACRIHSNEELAEFAAKKLLELKADN 670

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
              G + LLSNIYA    W++V ++   M+  G++K  G SW+     +  F   D+ H 
Sbjct: 671 D--GTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHL 728

Query: 777 QSHKIYEMLERLAMEMR 793
           QS KIYE L  L   ++
Sbjct: 729 QSQKIYETLADLIKRIK 745



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 10/297 (3%)

Query: 352 LHAYIIKNFVALPVIVLNAVI---ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           ++ YI  N +   +++L   +      V  WN +I   +     +  L L   M+   + 
Sbjct: 64  IYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWT 123

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTAR 465
            D  T   +  A   + N ++G   H  ++R G  FE    + + +I MY K   +  AR
Sbjct: 124 PDHYTFPFVFKACGEISNFELGASIHGCVIRLG--FESNVFVCNAVISMYGKCKAVVHAR 181

Query: 466 QIF-EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPAC 523
           ++F E    G  D  TWN++++ Y+   +   A   FR+M + + + P+ V + ++LP C
Sbjct: 182 KVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVC 241

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             +G    G+Q+HGF +R  L ++VFVG +L+DMY+K G +  A  VF ++  K+ VT+ 
Sbjct: 242 GYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWN 301

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
            M+ GY Q+G  E ALSLF  M+   IE D +T+ +V+S  +  G   E + +F  M
Sbjct: 302 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 358



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 225/520 (43%), Gaps = 105/520 (20%)

Query: 58  ARQLFDSITRP---TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           AR++FD +       +V WN+I+  +    +P  A+ L+ +M         D     ++L
Sbjct: 180 ARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILP-DTVGVVNIL 238

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
             C        G+ VH   +R       FV N+L++MY+ C    DA             
Sbjct: 239 PVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDAN------------ 286

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY--------------------------- 207
                 KVF+ MR ++VV WN +V+ Y +  R+                           
Sbjct: 287 ------KVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVIS 340

Query: 208 --------VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK--LGS 257
                    EA+  FR M     RP+ ++ +++  A +S+G        +   VK  L  
Sbjct: 341 GYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKG 400

Query: 258 EY---VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVE 312
           E+    +DL V ++ I MYA+    + AR +FD    ++ +V  W  MIGGY Q+     
Sbjct: 401 EHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANH 460

Query: 313 AIELFVQVLELDE-IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--------FVAL 363
           A++LF ++ ++D  IV +D T    L A ++L  L  G+Q+HAY+++         FVA 
Sbjct: 461 ALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 520

Query: 364 PVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            +I              V +++ +R+ VSW ++++ +  +G  ++   +  EM+K+  ++
Sbjct: 521 CLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVL 580

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
           D +T   +L A S+    D G               G+E Y  ++D+  ++G +  A ++
Sbjct: 581 DGITFLVVLYACSH-SGMDFGVD------------PGVEHYACMVDLLGRAGRLGEAMRL 627

Query: 468 FEKNDSG-DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
              ND   +     W A+++    +   E A  A +++LE
Sbjct: 628 I--NDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLE 665



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 179/432 (41%), Gaps = 62/432 (14%)

Query: 51  QEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTS 104
           Q GR   A  LF  +         V W+++I G+       EA+ ++ QM   +  P   
Sbjct: 309 QNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRP--- 365

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF-------SNPSRFVYNSLLNMYSTCLS 157
            +  T  S+L ACA    L  GK  HC+ ++               V N+L++MY+ C  
Sbjct: 366 -NVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC-- 422

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                    K +EV  + +D +C      + R+VV W  ++  Y +      A++ F  M
Sbjct: 423 ---------KSLEVARAMFDEICP-----KDRDVVTWTVMIGGYAQHGDANHALQLFSEM 468

Query: 218 LRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            ++   I P+  +   V  A + L   K    ++  +++      + LFVA+  I MY++
Sbjct: 469 FKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSK 528

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  D A+ +FD+  +RN   W +++ GY  +    +A  +F + +  + +V D +TFL 
Sbjct: 529 SGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDE-MRKEALVLDGITFLV 587

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G                      ++  V  +  M+    + G   E 
Sbjct: 588 VLYACSH-SGMDFG----------------------VDPGVEHYACMVDLLGRAGRLGEA 624

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           + L+ +M  +      V   ALLSA     N+++ +     LL      +G  + L ++Y
Sbjct: 625 MRLINDMPIEP---TPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIY 681

Query: 456 AKSGLIKTARQI 467
           A +   K   +I
Sbjct: 682 ANARRWKDVARI 693


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 229/744 (30%), Positives = 364/744 (48%), Gaps = 117/744 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK-- 167
           Y+ +L+ C    N   G+A+H   ++     S ++ N+LL+ Y            GL+  
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAG----GLRDA 84

Query: 168 ---YVEVDYSKYDLVC------------------KVFDTMRRRNVVAWNTIVSWYVKTER 206
              + E+  ++ ++                     VF  M  R+ V+W  +V    +  R
Sbjct: 85  RRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGR 144

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           + EA++    M   G  P+  +  NV  + +          V+  +VKLG    + + VA
Sbjct: 145 FGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG--LGSCVPVA 202

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MY + G  + A  +F+    R+   WN M+     N H                 
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVS---LNTH----------------- 242

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
                           L  +DL + L       F ++P        +R +VSWN MI+ +
Sbjct: 243 ----------------LGRMDLAESL-------FESMP--------DRSIVSWNAMIAGY 271

Query: 387 VQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            QNGLD + L L   M  +  M  D  T+T++LSA +NL N  +GKQ HAY+LR  + + 
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGD----------------------------- 475
             + + LI  YAKSG ++ AR+I +++   D                             
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 476 --RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             RD   W AMI GY QNG  +EA   FR M+     PN  T+A+VL  C  +  ++ GK
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQH 592
           Q+H  +IR LL+Q+  V  ++I MY++SG   +A  +F ++   K ++T+T+MI+   QH
Sbjct: 452 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  E A+ LF  M   G+EPD IT+V VLSACS+AG V+EG + +D ++ E++I P   H
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+L R G   EA EF++ +  E + +  WGSLL +CR+H ++ELAE+ A+KLL +
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIA-WGSLLSACRVHKNAELAELAAEKLLSI 630

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS  G +  ++N+Y+  G W +  ++ K  +E+ +RKE G SW  +   ++ F + D
Sbjct: 631 DPNNS--GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
             HPQ   +Y M  R+  E++ AG
Sbjct: 689 VVHPQRDAVYAMAARMWEEIKGAG 712



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 243/566 (42%), Gaps = 84/566 (14%)

Query: 33  PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           P+ +    T  S LS   + GR   AR +F  +     V W  +++G        EAI  
Sbjct: 92  PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
              M  +  +T    +T ++VL +CA T+   +G+ VH   ++        V NS+LNMY
Sbjct: 152 LLDMT-ADGFTPT-QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMY 209

Query: 153 STCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
             C  S  A  V              +  +     + DL   +F++M  R++V+WN +++
Sbjct: 210 GKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIA 269

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            Y +     +A++ F RM+    + P   +  +V  A ++LG+ +    V+  +++  +E
Sbjct: 270 GYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR--TE 327

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLE--------------------------- 291
              +  V ++ I  YA+ G  + AR+I D  +E                           
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387

Query: 292 ------RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
                 R+   W  MI GY QN    EAI+LF  ++       +  T  + LS  + L  
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP-NSYTLAAVLSVCASLAC 446

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMIS 384
           LD G+Q+H   I++ +     V NA+I                      ++ ++W +MI 
Sbjct: 447 LDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIH 443
           A  Q+G  +E + L  EM + G   D +T   +LSA S+    + GK+ +  +   H I 
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            E M  Y  ++D+ A++GL   A++ F +    + D   W ++++    +   E A +A 
Sbjct: 567 PE-MSHYACMVDLLARAGLFSEAQE-FIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA 624

Query: 502 RQMLEHNVTPN----VVTIASVLPAC 523
            ++L  ++ PN       IA+V  AC
Sbjct: 625 EKLL--SIDPNNSGAYSAIANVYSAC 648



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 33/433 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LA  LF+S+   + V WN +I G+  N L  +A+ L+S+M   S     D +T +S
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITS 302

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   N+RIGK VH + +R     +  V N+L++ Y+   S  +A  +  + +E D
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362

Query: 173 YSKYDLVC---------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
            +                     ++F  M  R+VVAW  ++  Y +  R  EA+  FR M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +  G  P++ +   V    +SL        ++   ++   E  +   V+++ I MYA  G
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS--VSNAIITMYARSG 480

Query: 278 CFDFARKIFDN-CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
            F +AR++FD  C  + T  W +MI    Q+    EA+ LF ++L    +  D +T++  
Sbjct: 481 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG-VEPDRITYVGV 539

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           LSA S    ++ G++ +  I       P          ++  +  M+    + GL  E  
Sbjct: 540 LSACSHAGFVNEGKRYYDQIKNEHQIAP----------EMSHYACMVDLLARAGLFSEAQ 589

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
             +  M  +    D++   +LLSA    +N ++ +     LL    +  G  S + ++Y+
Sbjct: 590 EFIRRMPVEP---DAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 646

Query: 457 KSGLIKTARQIFE 469
             G    A +I++
Sbjct: 647 ACGRWSDAARIWK 659


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 226/703 (32%), Positives = 362/703 (51%), Gaps = 103/703 (14%)

Query: 141 SRFVYNSLLNMYSTCLSSLDA-EMVGLKYVEVDYS------------KYDLVCKVFDTMR 187
           S ++ N+L+N+Y+     LDA ++     V+  +S            K +   +VFD + 
Sbjct: 9   SVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIP 68

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            R+ V+W TI+  Y +  R+ +A++ F  M++  + P+  +  NV  + ++ G       
Sbjct: 69  VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKK 128

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  +VKLG      + VA+S + MYA+ G    A+ +FD    RNT  WN M       
Sbjct: 129 VHSFVVKLGLHAC--VPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAM------- 179

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                 I L +    +D              A++Q + L                     
Sbjct: 180 ------ISLHMNCGRVD-------------LALAQFELLS-------------------- 200

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRN 426
                ERD+VSWN+MI+   Q+G D+E L     + K      D  ++ + LSA +NL  
Sbjct: 201 -----ERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEK 255

Query: 427 QDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK--------------- 470
              GKQ H Y++R      G + + LI MYAKSG ++ AR+I E+               
Sbjct: 256 LSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALL 315

Query: 471 ----------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
                           N   D D   W AMI GY QNGL  +A   F+ M+     PN  
Sbjct: 316 NGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSF 375

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+A++L A + + ++  GKQ+H  +IR     +  VG +L  MY+K+G IN A  VF  +
Sbjct: 376 TLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLL 435

Query: 575 PE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            + +++V++T+MI+   QHG+ E A+ LF  M   GI+PD IT+V VLSAC++ GLV++G
Sbjct: 436 RQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG 495

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
              FDLM+  +KI P+  HY C+ D+ GR G + EAY+FV+ +  E +V+  WGSLL SC
Sbjct: 496 RSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA-WGSLLSSC 554

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           +++ + +LA+V A++LL ++  NS  G +  L+N+Y+  G W++  K+RK M+ RG++KE
Sbjct: 555 KVYKNVDLAKVAAERLLLIEPNNS--GAYSALANVYSSCGKWDDAAKIRKLMKARGVKKE 612

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            G SW+ +    + F  +D  HPQ  +IY+M++++  E++  G
Sbjct: 613 QGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMG 655



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 152/611 (24%), Positives = 265/611 (43%), Gaps = 108/611 (17%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY 87
           H L   +P   T +  + LS   ++G+   A Q+FD I    +V W TII+G+       
Sbjct: 30  HDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFE 89

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           +AI ++  M K     +   +T ++VL +CA T +  IGK VH   ++   +    V NS
Sbjct: 90  DAIKIFVDMVKDKVLPT--QFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANS 147

Query: 148 LLNMYSTCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           LLNMY+       A++V              +  + ++  + DL    F+ +  R++V+W
Sbjct: 148 LLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSW 207

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           N++++   +     EA++ F  +L+   ++P   S  +   A ++L        ++G +V
Sbjct: 208 NSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIV 267

Query: 254 K--------LGSEYVN-----------------------DLFVASSAIFMYAELGCFDFA 282
           +        +G+  ++                       D+   ++ +  Y +LG    A
Sbjct: 268 RTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPA 327

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R+IF++  + +   W  MI GYVQN    +AIE+F  ++  +    +  T  + LSA S 
Sbjct: 328 RQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVS-EGPRPNSFTLAAMLSASSS 386

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNT 381
           +  L+ G+Q+HA  I++  AL   V NA+                       RD VSW +
Sbjct: 387 VTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTS 446

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI A  Q+GL +E + L  +M   G   D +T   +LSA            TH  L+  G
Sbjct: 447 MIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC-----------THGGLVEQG 495

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                  SY         L+K   +I       D   + +  M+  + + GLL+EA+   
Sbjct: 496 ------RSYF-------DLMKNVHKI-------DPTLSHYACMVDLFGRAGLLQEAYKFV 535

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ--NVFVGTSLIDMYS 559
             M    + P+V+   S+L +C    N++L K     + R LL +  N    ++L ++YS
Sbjct: 536 ENM---PMEPDVIAWGSLLSSCKVYKNVDLAKVA---AERLLLIEPNNSGAYSALANVYS 589

Query: 560 KSGVINYAANV 570
             G  + AA +
Sbjct: 590 SCGKWDDAAKI 600


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 215/647 (33%), Positives = 333/647 (51%), Gaps = 30/647 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M  R VV W  ++ WY     + EA + FR M R    P  ++F  + P  +    
Sbjct: 97  LFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVP 156

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFM--YAELGCFDFARKIFDNCLERNTEVWNT 299
             +   V+   VKLG  +  +LF+    + +  Y E+   D A  +F+  L++++  +NT
Sbjct: 157 QNAVGQVHAFAVKLG--FDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNT 214

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I GY ++    EAI LF+++ +       D TF   L AV  L +  LGQQLH   +  
Sbjct: 215 LITGYEKDGLYTEAIHLFLKMRQSGHKP-SDFTFSGVLKAVVGLHDFALGQQLHGLSVTT 273

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
             +    V N ++                    E D VS+N +IS++ Q    +E L L 
Sbjct: 274 GFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLF 333

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKS 458
            EMQ  GF   +     +LS A+NL +  VG+Q H   ++        + + L+DMYAK 
Sbjct: 334 REMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKC 393

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
            +   A  IF+      R   +W A+I+GY Q GL       F +M   N+  +  T A+
Sbjct: 394 EMFDEAELIFK--SLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFAT 451

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL A     ++ LGKQLH F IR    +NVF G+ L+DMY+K G I  A  VF ++P++N
Sbjct: 452 VLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 511

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           +V++  +I  Y  +G  E A+  F  M   G++PD+++ + VL ACS+ G V++G + F 
Sbjct: 512 AVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQ 571

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M   Y I P  +HY C+ D+LGR G+  EA + + E+  E + + +W S+L +CR++ +
Sbjct: 572 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEI-MWSSVLNACRIYKN 630

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
             LAE  A++L  M+       Y V +SNIYA  G WENV  V+K MRERG++K    SW
Sbjct: 631 QSLAERAAEQLFSMEKLRDAAAY-VSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSW 689

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           ++V   ++ F+S DQ HP   +I + +  L  E+   G K   +S V
Sbjct: 690 VEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPDTSSVV 736



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 172/625 (27%), Positives = 286/625 (45%), Gaps = 60/625 (9%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P   T +  + +S   + G    AR LFD++   T V W  ++  +  NN   EA  L+
Sbjct: 70  MPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLF 129

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            QM +S   T  D  T++++L  C +         VH      F+    F  N  L + +
Sbjct: 130 RQMCRSC--TLPDYVTFTTLLPGCNDAVPQNAVGQVHA-----FAVKLGFDTNLFLTVCN 182

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
             L S         Y EV   + DL C +F+ +  ++ V +NT+++ Y K   Y EA+  
Sbjct: 183 VLLKS---------YCEV--RRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHL 231

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M + G +PS  +F  V  A+  L D+     ++GL V  G  +  D  V +  +  Y
Sbjct: 232 FLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTG--FSRDASVGNQILHFY 289

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDV 331
           ++       R +F+   E +   +N +I  Y Q     E++ LF  +Q +  D   F   
Sbjct: 290 SKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNF--- 346

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------- 372
            F + LS  + L  L +G+Q+H   I       + V N+++                   
Sbjct: 347 PFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSL 406

Query: 373 -ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            +R  VSW  +IS +VQ GL   GL L  +M+      D  T   +L A++   +  +GK
Sbjct: 407 SQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGK 466

Query: 432 QTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           Q HA+++R G     F G  S L+DMYAK G IK A Q+FE  +  DR+  +WNA+I+ Y
Sbjct: 467 QLHAFIIRSGNLENVFSG--SGLVDMYAKCGSIKDAVQVFE--EMPDRNAVSWNALISAY 522

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQN 547
             NG  E A  AF +M++  + P+ V+I  VL AC+  G +E G +     S  Y +   
Sbjct: 523 ADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPK 582

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---YGQHGMSERALSLFR 603
                 ++D+  ++G    A  +  ++P E + + +++++     Y    ++ERA     
Sbjct: 583 KKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLF 642

Query: 604 SMKGCGIEPDAITFVAVLSACSYAG 628
           SM+      DA  +V++ +  + AG
Sbjct: 643 SMEKL---RDAAAYVSMSNIYAAAG 664


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 235/758 (31%), Positives = 400/758 (52%), Gaps = 52/758 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  +R +F++   P + ++  +I   V  +L   AI LY ++   S  T    + + S
Sbjct: 48  GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL--VSETTQISKFVFPS 105

Query: 113 VLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           VL+ACA +R +L +G  VH   I+   +    +  SLL MY    +  DAE         
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE--------- 156

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                    KVFD M  R++VAW+T+VS  ++    V+A+R F+ M+  G+ P  ++ ++
Sbjct: 157 ---------KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V    + LG  + A  V+G + +    +  D  + +S + MY++ G    + +IF+   +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITR--KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK 265

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           +N   W  MI  Y +     +A+  F ++++   I  + VT  S LS+   +  +  G+ 
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVTLYSVLSSCGLIGLIREGKS 324

Query: 352 LHAYIIK-----NFVALPV----------------IVLNAVIERDVVSWNTMISAFVQNG 390
           +H + ++     N+ +L +                 VL  V +R++V+WN++IS +   G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
           +  + L L  +M  Q    D+ T+ + +SA  N     +GKQ H +++R  +  E +++ 
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS 444

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMY+KSG + +A  +F  N    R   TWN+M+ G++QNG   EA   F  M    + 
Sbjct: 445 LIDMYSKSGSVDSASTVF--NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            N VT  +V+ AC+ +G++E GK +H   I   L +++F  T+LIDMY+K G +N A  V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETV 561

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +  ++ V++++MI  YG HG    A+S F  M   G +P+ + F+ VLSAC ++G V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG   F+LM+  + + P++EH+ C  D+L R G + EAY  +KE+    +   +WGSL+
Sbjct: 622 EEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA-SVWGSLV 679

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
             CR+H   ++ + +   L ++ T ++  GY+ LLSNIYAEEG WE   ++R  M+   L
Sbjct: 680 NGCRIHQKMDIIKAIKNDLSDIVTDDT--GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           +K  G S I++   V RF + ++   Q+ +IY  L  L
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 249/546 (45%), Gaps = 47/546 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G    A ++FD +     V W+T++   + N    +A+ ++  M         D  T 
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG--VEPDAVTM 205

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            SV++ CAE   LRI ++VH    R   +    + NSLL MYS C   L +E        
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSE-------- 257

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     ++F+ + ++N V+W  ++S Y + E   +A+R F  M++ GI P+ ++  
Sbjct: 258 ----------RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307

Query: 231 NVFPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +V  +   +G  +    V+G  V+  L   Y +   ++ + + +YAE G       +   
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRV 364

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +RN   WN++I  Y      ++A+ LF Q++    I  D  T  S++SA      + L
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT-QRIKPDAFTLASSISACENAGLVPL 423

Query: 349 GQQLHAYIIKN-----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           G+Q+H ++I+      FV   +I              V N +  R VV+WN+M+  F QN
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G   E + L   M      ++ VT  A++ A S++ + + GK  H  L+  G+     ++
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDT 543

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LIDMYAK G +  A  +F    S  R   +W++MI  Y  +G +  A   F QM+E   
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSS--RSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN V   +VL AC   G++E GK        + +  N       ID+ S+SG +  A  
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661

Query: 570 VFAKIP 575
              ++P
Sbjct: 662 TIKEMP 667



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 31/293 (10%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    A  +F+ I   + V WN+++ GF  N    EAI L+  M  S  Y   +  T+
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS--YLEMNEVTF 508

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            +V++AC+   +L  GK VH H +        F   +L++MY+ C     AE        
Sbjct: 509 LAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAE-------- 559

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      VF  M  R++V+W+++++ Y    R   A+  F  M+  G +P+ + F+
Sbjct: 560 ----------TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA-RKIFDNC 289
           NV  A    G  +     + L+   G    ++ F  +  I + +  G    A R I +  
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHF--ACFIDLLSRSGDLKEAYRTIKEMP 667

Query: 290 LERNTEVWNTMIGG--YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
              +  VW +++ G    Q    ++AI+      +L +IV DD  + + LS +
Sbjct: 668 FLADASVWGSLVNGCRIHQKMDIIKAIK-----NDLSDIVTDDTGYYTLLSNI 715


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 203/612 (33%), Positives = 339/612 (55%), Gaps = 31/612 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD M  R++V+WN++VS  +      +A R    M+R GI  +  S V+V PA  +  D
Sbjct: 169 VFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERD 228

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+GL++K G + V +L   ++ + MY + G  + + ++F+   E+N   WN+ +
Sbjct: 229 EGFGLSVHGLVLKSGLDSVVNL--GNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSAL 286

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
           G +       + +E+F +V+   E+    VT  S L A+  L    LG+++H Y I+  +
Sbjct: 287 GCFAHAGFHEDVLEMF-RVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAM 345

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + + N++++                    R+VVSWN MI+   QNG + E   LV E
Sbjct: 346 ESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIE 405

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           MQK G   +S T+  LL A S + +  +GKQ HA+ +   +  +  + + LID+YAK G 
Sbjct: 406 MQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQ 465

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  A+ IF++++   +D  ++N +I GY+Q+    E+   F+QM    +  + V+    L
Sbjct: 466 LSVAQDIFDRSE---KDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCL 522

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +   + GK++HG  +R LL+ + F+  SL+D+Y+K G++  A+ +F +I  K+  
Sbjct: 523 SACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVA 582

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++ TMILGYG HG  + A  LF  MK  G++ D ++++AVLSACS+ GLVD G + F  M
Sbjct: 583 SWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQM 642

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
             +  I+P   HY C+ D+LGR G++ E+ E +  +    N  ++WG+LLGSCR+HG  E
Sbjct: 643 IAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANS-DVWGALLGSCRIHGDIE 700

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           LA + A+ L E+   +S  GY+ LL N+Y+E G W   ++++  M+ R ++K    SW+ 
Sbjct: 701 LARLAAEHLFELKPEHS--GYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQ 758

Query: 761 VGGYVNRFASKD 772
            G  +  F   D
Sbjct: 759 SGNKLQAFLVGD 770



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 267/561 (47%), Gaps = 46/561 (8%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WN+++   + N +  +A      M +S      +  +  SV+ AC 
Sbjct: 167 RRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSG--IPVNVASLVSVVPACG 224

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             R+   G +VH   ++   +    + N+L++MY      L++ M               
Sbjct: 225 TERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGK-FGDLESSM--------------- 268

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VF+ M+ +N V+WN+ +  +     + + +  FR+M    + P +++  ++ PAL  
Sbjct: 269 --RVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVD 326

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           LG +     V+G  ++   E  +D+F+A+S + MYA+ GC + A  IF+N   RN   WN
Sbjct: 327 LGYFHLGKEVHGYSIRRAME--SDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWN 384

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI    QN    EA  L +++ +  E   +  T ++ L A S++  + +G+Q+HA+ I 
Sbjct: 385 AMIANLAQNGAETEAFSLVIEMQKNGECP-NSFTLVNLLPACSRVASVKMGKQIHAWSIH 443

Query: 359 NFVALPVIVLNAVI-------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
             +   + V NA+I                   E+D VS+NT+I  + Q+    E L L 
Sbjct: 444 RSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDVSYNTLIVGYSQSQCCFESLHLF 503

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKS 458
            +M+  G   D+V+    LSA +NL     GK+ H  L+R  ++    + + L+D+Y K 
Sbjct: 504 QQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKG 563

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G++ TA +IF  N    +D A+WN MI GY  +G ++ AF  F  M +  V  + V+  +
Sbjct: 564 GMLATASKIF--NRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIA 621

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EK 577
           VL AC+  G ++ GK+     I   +         ++D+  ++G ++ +  +   +P   
Sbjct: 622 VLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPA 681

Query: 578 NSVTYTTMILGYGQHGMSERA 598
           NS  +  ++     HG  E A
Sbjct: 682 NSDVWGALLGSCRIHGDIELA 702



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 188/412 (45%), Gaps = 42/412 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYSSVLKA 116
           A  +F++I     V WN +I     N    EA  L  +M+K+     C N +T  ++L A
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNG---ECPNSFTLVNLLPA 424

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+   ++++GK +H   I        FV N+L+++Y+ C                   + 
Sbjct: 425 CSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKC------------------GQL 466

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            +   +FD   + + V++NT++  Y +++   E++  F+ M   GI    +SF+    A 
Sbjct: 467 SVAQDIFDRSEKDD-VSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSAC 525

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDL-FVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           ++L  +K    ++G+LV+     +N   F+A+S + +Y + G    A KIF+    ++  
Sbjct: 526 ANLSAFKQGKEIHGVLVR---RLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVA 582

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WNTMI GY  +     A ELF  +++ D + +D V++++ LSA S    +D G++  + 
Sbjct: 583 SWNTMILGYGMHGQIDVAFELF-DLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQ 641

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +I              I+   + +  M+    + G   E + ++  M    F  +S    
Sbjct: 642 MIAQ-----------NIKPQQMHYACMVDLLGRAGQLSESVEIITNMP---FPANSDVWG 687

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           ALL +     + ++ +    +L        G  + L +MY++SG+   A +I
Sbjct: 688 ALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEI 739


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 226/717 (31%), Positives = 363/717 (50%), Gaps = 133/717 (18%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYSSVL+ CA +++L  GK VH                S++   +  +     E++GLK 
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVH----------------SIIKSNNVAVD----EVLGLKL 140

Query: 169 VEVDYSKYDLV--CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           V +  +  DL    +VFDTM ++NV  WN +VS Y K                       
Sbjct: 141 VSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK----------------------- 177

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
                       +GD+K +  ++ ++V+ G E                     + A ++F
Sbjct: 178 ------------IGDFKESICLFKIMVEKGIEGKRP-----------------ESASELF 208

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   +R+   WN+MI GYV N      +E++ Q++ L  I  D  T +S L   +    L
Sbjct: 209 DKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG-IDVDLATIISVLVGCANSGTL 267

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
            LG+ +H+  IK+     +   N ++                    ER+VVSW +MI+ +
Sbjct: 268 SLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            ++G  D  + L+ +M+K+G  +D V  T++L A +   + D GK  H Y     I    
Sbjct: 328 TRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDY-----IKANN 382

Query: 447 MES------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           MES       L+DMY K G +  A  +F       +D  +WN MI               
Sbjct: 383 MESNLFVCNALMDMYTKCGSMDGANSVFSTMVV--KDIISWNTMIG-------------- 426

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
                   + P+  T+A +LPAC  +  +E GK++HG+ +R     +  V  +L+D+Y K
Sbjct: 427 -------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 479

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            GV+  A  +F  IP K+ V++T MI GYG HG    A++ F  M+  GIEPD ++F+++
Sbjct: 480 CGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 539

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L ACS++GL+++G + F +M+ ++ I+P  EHY C+ D+L R G + +AYEF++ L    
Sbjct: 540 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAP 599

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +   IWG+LL  CR++   ELAE VA+++ E++  N+  GY+VLL+NIYAE   WE V +
Sbjct: 600 DA-TIWGALLCGCRIYHDIELAEKVAERVFELEPENT--GYYVLLANIYAEAEKWEEVKR 656

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFAS-KDQEHPQSHKIYEMLERLAMEMRNAG 796
           +R+++ ++GLRK  GCSWI++ G VN F S  +  HP S KI  +L+++  +M+  G
Sbjct: 657 MREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG 713



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 203/457 (44%), Gaps = 69/457 (15%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  A +LFD +     + WN++I G+V N L    + +Y QM         D  T  SV
Sbjct: 200 RPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLG--IDVDLATIISV 257

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L  CA +  L +GKAVH   I+          N+LL+MYS C   LD  +          
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC-GDLDGAL---------- 306

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  +VF+ M  RNVV+W ++++ Y +  R   A+R  + M + G++   ++  ++ 
Sbjct: 307 -------RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +  G   +   V+  +     E  ++LFV ++ + MY + G  D A  +F   + ++
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNME--SNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WNTMIG                      E+  D  T    L A + L  L+ G+++H
Sbjct: 418 IISWNTMIG----------------------ELKPDSRTMACILPACASLSALERGKEIH 455

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            YI++N  +    V NA+++                    +D+VSW  MIS +  +G  +
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGN 515

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY-- 450
           E +    EM+  G   D V+  ++L A S+    + G +   Y++++  + E  +E Y  
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYAC 574

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           ++D+ +++G +  A +  E       D   W A++ G
Sbjct: 575 MVDLLSRTGNLSKAYEFIETLPIAP-DATIWGALLCG 610



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 22/184 (11%)

Query: 475 DRDQATWNAMIAGYTQNGLLEEA--FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           DR    +NA I  + Q G LE A   V   Q  E        T +SVL  C    ++  G
Sbjct: 63  DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK----TYSSVLQLCAGSKSLTDG 118

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K++H       +  +  +G  L+ +Y+  G +     VF  + +KN   +  M+  Y + 
Sbjct: 119 KKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 593 GMSERALSLFRSMKGCGIEP----------------DAITFVAVLSACSYAGLVDEGLQI 636
           G  + ++ LF+ M   GIE                 D I++ +++S     GL + GL+I
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEI 238

Query: 637 FDLM 640
           +  M
Sbjct: 239 YKQM 242


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 220/688 (31%), Positives = 362/688 (52%), Gaps = 50/688 (7%)

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           HC  I+  +  S +  N++++ Y+ C                   +  +  K+F    +R
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKC------------------GEIRIASKMFGETSQR 63

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           + V+WNT+++ +V    +  A+   + M R G      SF ++   ++ +G  +    V+
Sbjct: 64  DAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
            ++VK+G  Y  ++F  S+ + MYA+    + A ++F +   RN+  WN +I GY Q   
Sbjct: 124 SMMVKMG--YEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGD 181

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A  L +  +EL+ +  DD TF   L+ +       L  Q+HA I+K+ +A    V N
Sbjct: 182 RGTAFWL-LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240

Query: 370 AVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           A+I                      RD+V+WN+M++A++ N  ++E   L  EMQ  GF 
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFE 300

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKS--GLIKTAR 465
            D  T T+++SAA    +Q  GK  H  +++ G+ F   + + LI MY KS    +  A 
Sbjct: 301 PDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            IFE  +  ++D  +WN+++ G++Q+GL E+A   F  M    V  +    ++VL +C+ 
Sbjct: 361 NIFESLE--NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 418

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  ++LG+Q+H   ++   + N FV +SLI MYSK GVI  A   F   P+ +S+ + ++
Sbjct: 419 LATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSL 478

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GY QHG  + AL LF  MK   ++ D ITFVAVL+ACS+ GLV+EG      M+ +Y 
Sbjct: 479 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 538

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I P  EHY C+ D+LGR G++ EA   ++ +  E + + +W +LLG+CR  G  ELA  V
Sbjct: 539 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAM-VWKTLLGACRTCGDIELASQV 597

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A  LLE++        +VLLS+++     W     +++ M+ERG++K  G SWI+V   V
Sbjct: 598 ASHLLELEPEEHCT--YVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEV 655

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMR 793
             F ++D+ HP   +IY  L  L  E+R
Sbjct: 656 RSFNAEDRSHPNCEEIYLRLGELMEEIR 683



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 177/669 (26%), Positives = 300/669 (44%), Gaps = 94/669 (14%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   + G   +A ++F   ++   V WNT+I GFV N   +E  L + +  K  
Sbjct: 36  TANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFV-NLGNFETALEFLKSMKRY 94

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
            + + D Y++ S+LK  A    + +G+ VH   ++     + F  ++LL+MY+ C    D
Sbjct: 95  GF-AVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVED 153

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   +VF ++  RN V WN ++S Y +      A      M   
Sbjct: 154 A------------------FEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELE 195

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+     +F  +   L     +K    V+  +VK G    +D  V ++ I  Y+E G  +
Sbjct: 196 GVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHG--LASDTTVCNAIITAYSECGSIE 253

Query: 281 FARKIFDNCLE-RNTEVWNTMIGGYVQNNHPVEAIELFV--QVLELDEIVFDDVTFLSAL 337
            A ++FD  +E R+   WN+M+  Y+ NN   EA +LF+  QVL  +  ++   T+ S +
Sbjct: 254 DAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIY---TYTSVI 310

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------ERD 375
           SA  +      G+ LH  +IK  +   V + N++I                       +D
Sbjct: 311 SAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKD 370

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSWN++++ F Q+GL ++ L     M+ Q  +ID    +A+L + S+L    +G+Q H 
Sbjct: 371 HVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHV 430

Query: 436 YLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNGL 493
            +L+ G    G + S LI MY+K G+I+ AR+ F   D+  +D +  WN++I GY Q+G 
Sbjct: 431 LVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSF---DATPKDSSIAWNSLIFGYAQHGR 487

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            + A   F  M +  V  + +T  +VL AC+ +G +E G                     
Sbjct: 488 GKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF------------------ 529

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L  M S  G           IP +    Y  MI   G+ G  + A +L  +M     EPD
Sbjct: 530 LKSMESDYG-----------IPPRME-HYACMIDLLGRAGRLDEAKALIEAMP---FEPD 574

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH--YCCVADMLGRVGKVVEAYE 671
           A+ +  +L AC   G ++   Q+   + +   ++P  EH  Y  ++ M G + +  E   
Sbjct: 575 AMVWKTLLGACRTCGDIELASQVASHLLE---LEPE-EHCTYVLLSSMFGHLRRWNEKAS 630

Query: 672 FVKELGEEG 680
             + + E G
Sbjct: 631 IKRLMKERG 639


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 234/719 (32%), Positives = 366/719 (50%), Gaps = 96/719 (13%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDA 161
           T  D++T   VLKAC E  + R G A H   I C    S  F+ N+L+ MYS C S  +A
Sbjct: 6   TRLDHFTLPHVLKACGELPSYRCGSAFH-GLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWNTIVSWYVKTERYVEAVRQF-RMM 217
            M+                  FD + +R   +V++WN+IVS +VK+     A+  F +M 
Sbjct: 65  SMI------------------FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 106

Query: 218 LRMGIRPST-----ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
           L +  +P+      IS VN+ PA  SL        V+G  ++ G+    D+FV ++ I  
Sbjct: 107 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFL--DVFVGNALIDA 164

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA+ G  + A K+F+    ++   WN M+ GY Q+ +   A ELF  + + +        
Sbjct: 165 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN-------- 216

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
                                                  I  D+V+W  +I+ + Q G  
Sbjct: 217 ---------------------------------------IPLDMVTWTAVIAGYSQRGCS 237

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-----HFEGM 447
            E L +  +M   G + + VT+ ++LSA ++L     G + HAY L++ +      F G 
Sbjct: 238 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 297

Query: 448 E------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           +      + LIDMY+K    K AR IF+     +R+  TW  MI G+ Q G   +A   F
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357

Query: 502 RQMLE--HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNV-FVGTSLIDM 557
            +M+   + V PN  TI+ +L AC  +  I +GKQ+H + +R+   D +  FV   LI+M
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G ++ A +VF  + +K+++++T+M+ GYG HG    AL +F  M+  G  PD ITF
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 477

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           + VL ACS+ G+VD+GL  FD M  +Y + P  EHY    D+L R G++ +A++ VK++ 
Sbjct: 478 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 537

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E   + +W +LL +CR+H + ELAE    KL+EM+  N   G + L+SNIYA  G W++
Sbjct: 538 MEPTAV-VWVALLSACRVHSNVELAEHALNKLVEMNAEND--GSYTLISNIYATAGRWKD 594

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V ++R  M++ G++K  GCSW+        F   D+ HP S +IY +LE L   ++  G
Sbjct: 595 VARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 653



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 239/534 (44%), Gaps = 91/534 (17%)

Query: 58  ARQLFDSITR---PTTVIWNTIIIGFVCNNLPYEAILLYSQM----KKSSPYTSCDNYTY 110
           A  +FD IT+      + WN+I+   V ++  + A+ L+S+M     +       D  + 
Sbjct: 64  ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 123

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA--------- 161
            ++L AC   + +   K VH + IR  +    FV N+L++ Y+ C    +A         
Sbjct: 124 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 183

Query: 162 -EMVGLKYVEVDYSK---YDLVCKVFDTMRRRNV----VAWNTIVSWYVKTERYVEAVRQ 213
            ++V    +   YS+   +    ++F  MR+ N+    V W  +++ Y +     EA+  
Sbjct: 184 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 243

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG-----LLVKLGSEYVN---DLFV 265
           FR M+  G  P+ ++ ++V  A +SLG +     ++       L+ L +++     DL V
Sbjct: 244 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 303

Query: 266 ASSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-E 322
            ++ I MY++   F  AR IFD+    ERN   W  MIGG+ Q     +A++LFV+++ E
Sbjct: 304 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 363

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--------FVALPVI-------- 366
              +  +  T    L A + L  + +G+Q+HAY++++        FVA  +I        
Sbjct: 364 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGD 423

Query: 367 ------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                 V +++ ++  +SW +M++ +  +G   E L +  +M+K GF+ D +T   +L A
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 483

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            S           H  ++  G+      SY   M A  GL   A       D        
Sbjct: 484 CS-----------HCGMVDQGL------SYFDSMSADYGLTPRAEHYAYAID-------- 518

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
              ++A +   G L++A+   + M    + P  V   ++L AC    N+EL + 
Sbjct: 519 ---LLARF---GRLDKAWKTVKDM---PMEPTAVVWVALLSACRVHSNVELAEH 563



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 185/452 (40%), Gaps = 55/452 (12%)

Query: 51  QEGRPHLARQLFDSITRPTT----VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           Q G    A +LF ++ +       V W  +I G+      +EA+ ++ QM  S    +C 
Sbjct: 198 QSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC- 256

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIR-CF---------SNPSRFVYNSLLNMYSTCL 156
             T  SVL ACA       G  +H + ++ C           +    VYN+L++MYS C 
Sbjct: 257 -VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 315

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDT--MRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
           S   A                    +FD   +  RNVV W  ++  + +     +A++ F
Sbjct: 316 SFKAAR------------------SIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357

Query: 215 RMMLR--MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
             M+    G+ P+  +   +  A + L   +    ++  +++      +  FVA+  I M
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G  D AR +FD+  +++   W +M+ GY  +    EA+++F ++ +    V DD+T
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG-FVPDDIT 476

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           FL  L A S    +D G      +  ++   P              +   I    + G  
Sbjct: 477 FLVVLYACSHCGMVDQGLSYFDSMSADYGLTP----------RAEHYAYAIDLLARFGRL 526

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI 452
           D+    V +M  +     +V   ALLSA     N ++ +     L+      +G  + + 
Sbjct: 527 DKAWKTVKDMPMEP---TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 583

Query: 453 DMYAKSGLIKTA---RQIFEKNDSGDRDQATW 481
           ++YA +G  K     R + +K+    R   +W
Sbjct: 584 NIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 615


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 212/639 (33%), Positives = 342/639 (53%), Gaps = 30/639 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD+M +R  V W  ++  Y +  ++ EA   F  M R GI P  +S   +    +    
Sbjct: 154 LFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDS 213

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+  ++KLG  Y + L V++S +  Y +      A ++F++  ER++  +N ++
Sbjct: 214 VNEVRQVHSHVIKLG--YDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALL 271

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +     EAI LF ++ E+      + TF + L+A  QL +++ GQQ+H +++K   
Sbjct: 272 TGYSKEGFNREAINLFFKMQEVGYRP-TEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNF 330

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              V V NA++                    E D +S+N +++ +  NG   E L L  E
Sbjct: 331 VWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKE 390

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKSGL 460
           +Q  GF   +     LLS A+   N D+G+Q H+  ++   I    + + L+DMYAK G 
Sbjct: 391 LQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGE 450

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
              A +IF  +D   +    W AMI+ Y Q GL E+    F +M    +  +  T AS++
Sbjct: 451 FGEANRIF--SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIV 508

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  + ++ LGKQLH   I      NVF G++L+DMY+K G I  A  +F ++P +NSV
Sbjct: 509 RACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSV 568

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++  +I  Y Q+G  +  L LF  M   G++PD+++ +++L ACS+ GLV+EGLQ FD M
Sbjct: 569 SWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSM 628

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            + YK+ P  EHY    DML R G+  EA + + ++  E + + +W S+L SC +H + E
Sbjct: 629 TRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI-MWSSVLNSCGIHKNQE 687

Query: 701 LAEVVAKKLLEMDT-RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           LA+  A +L  M   R++ P  +V +SNIYA  G W+NV KV+K MRERG++K    SW+
Sbjct: 688 LAKKAANQLFNMKVLRDAAP--YVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWV 745

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           ++    + F + D+ HPQ  +I + L+ L  +M   G K
Sbjct: 746 EIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYK 784



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 170/620 (27%), Positives = 296/620 (47%), Gaps = 56/620 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    AR LFDS+ + T V W  +I G+  NN   EA  L+ +M +       D+ + 
Sbjct: 144 KSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHG--IDPDHVSL 201

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +++L    E  ++   + VH H I+   + +  V NSLL+ Y    S      +GL +  
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS------LGLAF-- 253

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     ++F+ +  R+ V +N +++ Y K     EA+  F  M  +G RP+  +F 
Sbjct: 254 ----------QLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFA 303

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  A   L D +    V+G +VK    +V ++FVA++ +  Y++      A K+F    
Sbjct: 304 AILTAGIQLDDIEFGQQVHGFVVK--CNFVWNVFVANALLDFYSKHDRVVEASKLFYEMP 361

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
           E +   +N ++  Y  N    E++ELF  +Q    D   F   T LS ++A+S    LD+
Sbjct: 362 EVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLS-IAAIS--LNLDI 418

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G+Q+H+  I       ++V N++++                    +  V W  MIS++VQ
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI---HFE 445
            GL ++GL L  EMQ+     D+ T  +++ A ++L +  +GKQ H++++  G     F 
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFS 538

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           G  S L+DMYAK G IK A Q+F++     R+  +WNA+I+ Y QNG  +     F +M+
Sbjct: 539 G--SALVDMYAKCGSIKDALQMFQEMPV--RNSVSWNALISAYAQNGDGDCTLRLFEEMV 594

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVI 564
              + P+ V++ S+L AC+  G +E G Q      R Y L        S IDM  + G  
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRF 654

Query: 565 NYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + A  + A++P E + + +++++   G H   E A      +    +  DA  +V + + 
Sbjct: 655 DEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNI 714

Query: 624 CSYAGLVDEGLQIFDLMQQE 643
            + AG  D   ++   M++ 
Sbjct: 715 YAAAGEWDNVGKVKKAMRER 734



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 236/505 (46%), Gaps = 33/505 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           +++ G  P+T     +  +    GD   A  ++  +         ++F  ++ I  Y + 
Sbjct: 92  IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPH------KNIFSTNTMIMGYIKS 145

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    AR +FD+  +R    W  +IGGY QNN   EA  LF++ +    I  D V+  + 
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE-MGRHGIDPDHVSLATL 204

Query: 337 LSAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDV 376
           LS  ++   ++  +Q+H+++IK                      + L   + N + ERD 
Sbjct: 205 LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDS 264

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V++N +++ + + G + E + L ++MQ+ G+     T  A+L+A   L + + G+Q H +
Sbjct: 265 VTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGF 324

Query: 437 LLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           +++    +   + + L+D Y+K   +  A ++F   +  + D  ++N ++  Y  NG ++
Sbjct: 325 VVKCNFVWNVFVANALLDFYSKHDRVVEASKLFY--EMPEVDGISYNVLVTCYAWNGRVK 382

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           E+   F+++            A++L       N+++G+Q+H  +I       + VG SL+
Sbjct: 383 ESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLV 442

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMY+K G    A  +F+ +  ++SV +T MI  Y Q G+ E  L LF  M+   I  DA 
Sbjct: 443 DMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAA 502

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T+ +++ AC+    +  G Q+   +     I         V DM  + G + +A +  +E
Sbjct: 503 TYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALV-DMYAKCGSIKDALQMFQE 561

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSE 700
           +    +V   W +L+ +   +G  +
Sbjct: 562 MPVRNSV--SWNALISAYAQNGDGD 584



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 244/559 (43%), Gaps = 87/559 (15%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+     LA QLF+ I    +V +N ++ G+       EAI L+ +M++     
Sbjct: 238 SLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRP 297

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           +   +T++++L A  +  ++  G+ VH   ++C    + FV N+LL+             
Sbjct: 298 T--EFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDF------------ 343

Query: 164 VGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                    YSK+D V    K+F  M   + +++N +V+ Y    R  E++  F+ +   
Sbjct: 344 ---------YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFT 394

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G       F  +    +   +      ++   +   ++ ++++ V +S + MYA+ G F 
Sbjct: 395 GFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIV--TDAISEILVGNSLVDMYAKCGEFG 452

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A +IF +   +++  W  MI  YVQ     + ++LFV+ ++  +I  D  T+ S + A 
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE-MQRAKIGADAATYASIVRAC 511

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           + L  L LG+QLH++II +     V   +A+++                    R+ VSWN
Sbjct: 512 ASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWN 571

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +ISA+ QNG  D  L L  EM + G   DSV++ ++L A S           H  L+  
Sbjct: 572 ALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS-----------HCGLVEE 620

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           G+ +                  +  +I++     +   +T + +  G    G  +EA   
Sbjct: 621 GLQY----------------FDSMTRIYKLVPKKEHYASTIDMLCRG----GRFDEAEKL 660

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG--FSIRYLLDQNVFVGTSLIDMY 558
             QM      P+ +  +SVL +C    N EL K+     F+++ L D   +V  S  ++Y
Sbjct: 661 MAQM---PFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMS--NIY 715

Query: 559 SKSGVINYAANVFAKIPEK 577
           + +G  +    V   + E+
Sbjct: 716 AAAGEWDNVGKVKKAMRER 734


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 240/749 (32%), Positives = 390/749 (52%), Gaps = 64/749 (8%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +PK    T  + L   C+      A  LF  +     V WNT+I     N    +A
Sbjct: 62  LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKA 121

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + +Y +M +     +  ++T +SVL AC    ++  G+  H   I+   + + +V N+LL
Sbjct: 122 LGVYYRMSREGFVPT--HFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALL 179

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MY+ C    DA                   + F  +   N V++  ++     +++  E
Sbjct: 180 GMYAKCRCIGDA------------------IQAFGDVPEPNEVSFTAMMGGLADSDQVNE 221

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLG----------DYKSADV----VYGLLVKL 255
           A R FR+MLR  I   ++S  +V    S  G          D  S+DV    V+ L +K 
Sbjct: 222 AFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKH 281

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G E  +DL + +S + MYA+ G  D A  IF N  E +   WN MI GY Q +   +AIE
Sbjct: 282 GFE--SDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 339

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERD 375
            ++Q ++      D++T+++ L A  +  +++ G+Q+                + +    
Sbjct: 340 -YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQM---------------FDGMSSPS 383

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           + SWNT++S + QN    E + L  EMQ +    D  T+  +LS+ + +   + G+Q HA
Sbjct: 384 LSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHA 443

Query: 436 Y----LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
                + R  I+   + S LI MY+K G ++ A++IF++    + D   WN+M+AG + N
Sbjct: 444 VSQKAVFRTDIY---LASGLIGMYSKCGKVEMAKRIFDR--IAELDIVCWNSMMAGLSLN 498

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
            L +EAF  F++M E  + P+  + A+VL  C  + ++  G+Q+H    R     + FVG
Sbjct: 499 SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVG 558

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           ++LIDMYSK G ++ A  VF  +  KN+VT+  MI GY Q+G  + A+ L+  M G G +
Sbjct: 559 SALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEK 618

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD ITFVAVL+ACS++GLVD G++IF+ MQQE+ ++P  +HY C+ D LGR G++ EA  
Sbjct: 619 PDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEV 678

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            + ++  + + + IW  LL SCR++    LA   A++L  +D +NS P  +VLL+NIY+ 
Sbjct: 679 LIDKMPCKYDPI-IWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAP--YVLLANIYSS 735

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWID 760
            G W++   VR+ M    + K+ G SWI+
Sbjct: 736 LGRWDDAKAVRELMSYNQVVKDPGYSWIE 764



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 257/598 (42%), Gaps = 122/598 (20%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +S+L+ C + +    GK +H H +R   +   F+ N L+  Y+ C +++DA         
Sbjct: 9   ASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKC-NAIDASR------- 60

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT--------------ERYV-------- 208
                     ++FD M +R++  WN I+  Y K               ER +        
Sbjct: 61  ----------RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLIS 110

Query: 209 ---------EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
                    +A+  +  M R G  P+  +  +V  A  +L D +     +G+ +K+G + 
Sbjct: 111 ALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLD- 169

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            N+++V ++ + MYA+  C   A + F +  E N   +  M+GG   ++   EA  LF  
Sbjct: 170 -NNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRL 228

Query: 320 VLELDEIVFDDVTFLSALSAVSQ--LQELDL------------GQQLHAYIIKNFVALPV 365
           +L  + I  D V+  S L   S+    E  L            GQQ+H   IK+     +
Sbjct: 229 MLR-NRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDL 287

Query: 366 IVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            + N+++                    E  VVSWN MI+ + Q     + +  +  MQ  
Sbjct: 288 HLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYH 347

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
           GF  D +T   +L A                                    KSG I+  R
Sbjct: 348 GFEPDEITYVNMLVAC----------------------------------IKSGDIEAGR 373

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           Q+F+   S     ++WN +++GY+QN   +EA   FR+M   +V P+  T+A +L +   
Sbjct: 374 QMFDGMSS--PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAG 431

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           M  +E G+Q+H  S + +   ++++ + LI MYSK G +  A  +F +I E + V + +M
Sbjct: 432 MMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSM 491

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           + G   + + + A + F+ M+  G+ P   ++  VLS C+    + +G Q+   + +E
Sbjct: 492 MAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE 549


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 250/763 (32%), Positives = 395/763 (51%), Gaps = 70/763 (9%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           FD I  P     N  ++  + + LP++A+  +    +     + D  T +  LKAC    
Sbjct: 34  FDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGES 93

Query: 122 NLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
             ++G  +H  F  C    S   V NSL+ MY  C S                  +    
Sbjct: 94  --KLGCQIH-GFAVCSGFVSFVTVSNSLMKMY--CKSG----------------NFGKAL 132

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VF+ +   ++V+WNT++S +   E  V+A+   R M   GI    +++ +         
Sbjct: 133 IVFENLSHPDIVSWNTVLSGF---EESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDH 189

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            +     ++ L+VK G     ++F+ ++ + MY+  G  D AR++FD   ER+   WN M
Sbjct: 190 GFLFGWQLHSLVVKCG--LGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAM 247

Query: 301 IGGYVQNN--HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           I GY Q    + +EA+ LFV ++    ++ D V+   A+SA   ++ L+LG+Q+H    K
Sbjct: 248 ISGYAQEGKCYGLEAVLLFVNMVR-HGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQK 306

Query: 359 NFVALPVIVLN----------------AVIE----RDVVSWNTMISAFVQNGLDDE-GLM 397
                 V V N                AV E    R+VVSW TMIS      +D+E  + 
Sbjct: 307 VGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS------IDEEDAVS 360

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           L   M+  G   + VT   L+ A +       G   H   ++     E  + +  I MYA
Sbjct: 361 LFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYA 420

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   I+ + +IFE+ +   R+  +WNA+I+GY QNG  +EA + +   ++  + PN  T 
Sbjct: 421 KFECIQESTKIFEELNC--RETVSWNALISGYAQNGSYKEALLTYLSAVK-EIKPNQYTF 477

Query: 517 ASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            SVL A     +I L  GK  H   ++  L  +  V  +L+DMY K G I  +  VF + 
Sbjct: 478 GSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNET 537

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            E+    +T +I  Y +HG  E  +SL+  M+  GI PD+ITF++VL+AC   G+VD G 
Sbjct: 538 LERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGH 597

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           ++FD M +++ I+P++EHY  + DMLGRVG++ EA E + ++   G  L +  SLLGSCR
Sbjct: 598 RVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQI-PGGPGLSVLQSLLGSCR 656

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           LHG+ E+AE V  +L+EMD  +S P  +VL++N+YAE+G WE V +VR+ MR RG++KEV
Sbjct: 657 LHGNMEMAEKVVGRLIEMDPASSGP--YVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEV 714

Query: 755 GCSWIDVGG----YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           G SW+DV      Y++ F+S D+ HP+S  I ++ E L ++M+
Sbjct: 715 GFSWVDVSNVDSLYLHGFSSGDKSHPESENICKIAEFLGLQMK 757



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 167/710 (23%), Positives = 305/710 (42%), Gaps = 114/710 (16%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGF--VC 82
           QIH  +     +   T+ + L K+ C+ G    A  +F++++ P  V WNT++ GF    
Sbjct: 98  QIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEESV 157

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           + L +   + Y  +       + D  TY+S L  C        G  +H   ++C      
Sbjct: 158 DALNFARSMHYCGI-------AFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEV 210

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           F+ N+L+ MYS                   +   D   +VFD M  R++V+WN ++S Y 
Sbjct: 211 FIGNALVTMYSR------------------WGMLDEARRVFDEMPERDLVSWNAMISGYA 252

Query: 203 KTERY--VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           +  +   +EAV  F  M+R G+    +S      A   + + +    ++GL  K+G  Y 
Sbjct: 253 QEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVG--YG 310

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
             + V +  +  Y++      A+ +F++   RN   W TMI     +    +A+ LF   
Sbjct: 311 THVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMI-----SIDEEDAVSLF-NA 364

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           + ++ +  +DVTF+  + AV+    +  G  +H   IK+       V N+ I        
Sbjct: 365 MRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFEC 424

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLML----VYEMQKQGFMIDSVTVTA 416
                        R+ VSWN +IS + QNG   E L+     V E++   +   SV + A
Sbjct: 425 IQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKEIKPNQYTFGSV-LNA 483

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGD 475
           + +A     N   GK  H++LL+ G+  + + S  L+DMY K G I  ++++F  N++ +
Sbjct: 484 IAAAEDISLNH--GKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVF--NETLE 539

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           R Q  W A+I+ Y ++G  E     + +M    + P+ +T  SVL AC   G ++ G ++
Sbjct: 540 RTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRV 599

Query: 536 HGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG------ 588
               + ++ ++      + ++DM  + G ++ A  +  +IP    ++    +LG      
Sbjct: 600 FDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHG 659

Query: 589 -----------------------------YGQHGMSERALSLFRSMKGCGIEPD-AITFV 618
                                        Y + G  E+   + R M+G G++ +   ++V
Sbjct: 660 NMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWV 719

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
            V +  S   L   G    D      K  P +E+ C +A+ LG   K+++
Sbjct: 720 DVSNVDS---LYLHGFSSGD------KSHPESENICKIAEFLGLQMKILK 760


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 199/603 (33%), Positives = 327/603 (54%), Gaps = 60/603 (9%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCF---DFARKIFDNCLERNTEVWNTMIGGY 304
            +G +++ G+   +D + AS  +F  A L  F   ++ARK+FD   + N+  WNT+I  Y
Sbjct: 49  THGHMIRTGT--FSDPYSASK-LFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
                PV +I  F+ ++   +   +  TF   + A +++  L LGQ LH   +K+ V   
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD 165

Query: 365 VIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V N++I                    E+DVVSWN+MI+ FVQ G  D+ L L  +M+ 
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 225

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           +      VT+  +LSA + +RN + G+Q  +Y+  + ++    + + ++DMY K G I+ 
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285

Query: 464 ARQIFEKNDSGD-----------------------------RDQATWNAMIAGYTQNGLL 494
           A+++F+  +  D                             +D   WNA+I+ Y QNG  
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345

Query: 495 EEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EA + F ++ L+ N+  N +T+ S L AC  +G +ELG+ +H +  ++ +  N  V ++
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MYSK G +  +  VF  + +++   ++ MI G   HG    A+ +F  M+   ++P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +TF  V  ACS+ GLVDE   +F  M+  Y I P  +HY C+ D+LGR G + +A +F+
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
           + +    +   +WG+LLG+C++H +  LAE+   +LLE++ RN   G HVLLSNIYA+ G
Sbjct: 526 EAMPIPPST-SVWGALLGACKIHANLNLAEMACTRLLELEPRND--GAHVLLSNIYAKLG 582

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            WENV ++RK MR  GL+KE GCS I++ G ++ F S D  HP S K+Y  L  +  +++
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642

Query: 794 NAG 796
           + G
Sbjct: 643 SNG 645



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 255/545 (46%), Gaps = 83/545 (15%)

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSS 158
           P T+ +   + S+++ C   R L   K  H H IR   FS+P           YS   S 
Sbjct: 24  PTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDP-----------YSA--SK 67

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMM 217
           L A      +  ++Y++     KVFD + + N  AWNT++  Y      V ++  F  M+
Sbjct: 68  LFAMAALSSFASLEYAR-----KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
                 P+  +F  +  A + +        ++G+ VK  S   +D+FVA+S I  Y   G
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK--SAVGSDVFVANSLIHCYFSCG 180

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             D A K+F    E++   WN+MI G+VQ   P +A+ELF + +E +++    VT +  L
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF-KKMESEDVKASHVTMVGVL 239

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVI------------------------------- 366
           SA ++++ L+ G+Q+ +YI +N V + +                                
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299

Query: 367 --------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                               VLN++ ++D+V+WN +ISA+ QNG  +E L++ +E+Q Q 
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359

Query: 407 FM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
            M ++ +T+ + LSA + +   ++G+  H+Y+ +HGI     + S LI MY+K G ++ +
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R++F  N    RD   W+AMI G   +G   EA   F +M E NV PN VT  +V  AC+
Sbjct: 420 REVF--NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477

Query: 525 PMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             G ++  + L H     Y +         ++D+  +SG +  A      +P   S +  
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537

Query: 584 TMILG 588
             +LG
Sbjct: 538 GALLG 542



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 138/583 (23%), Positives = 247/583 (42%), Gaps = 104/583 (17%)

Query: 3   SSSVPLPLPPPPPTATPPPP--------------------QLPQIHSLSPPIPKLKTPTI 42
           S++ PL LP  P  + P  P                    QL Q H           P  
Sbjct: 5   STAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS 64

Query: 43  RSRL---SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
            S+L   + +        AR++FD I +P +  WNT+I  +     P  +I  +  M   
Sbjct: 65  ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124

Query: 100 SPYTSC--DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           S    C  + YT+  ++KA AE  +L +G+++H   ++       FV NSL++ Y +C  
Sbjct: 125 S---QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC-- 179

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                              D  CKVF T++ ++VV+WN++++ +V+     +A+  F+ M
Sbjct: 180 ----------------GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAEL 276
               ++ S ++ V V  A + + + +    V   + +     VN +L +A++ + MY + 
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE---NRVNVNLTLANAMLDMYTKC 280

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYV------------------------------- 305
           G  + A+++FD   E++   W TM+ GY                                
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-----NF 360
           QN  P EA+ +F ++     +  + +T +S LSA +Q+  L+LG+ +H+YI K     NF
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400

Query: 361 VALPVI---------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
                +               V N+V +RDV  W+ MI     +G  +E + + Y+MQ+ 
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAKSGLIKT 463
               + VT T +  A S+    D  +   H     +GI  E    + ++D+  +SG ++ 
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           A +  E         + W A++     +  L  A +A  ++LE
Sbjct: 521 AVKFIEAMPIPP-STSVWGALLGACKIHANLNLAEMACTRLLE 562


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 213/592 (35%), Positives = 339/592 (57%), Gaps = 27/592 (4%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           ML  G  P    F +V  + + + D +  + V+G +++LG  +  DL+  ++ + MY++ 
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGF--DLYTCNALMNMYSKF 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV--FDDVTFL 334
              +      +  ++R  +  + M+GG  +     +         ELDE V   D    L
Sbjct: 59  WSLE------EGGVQRFCD--SKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDL 110

Query: 335 SALSAV-----SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----RDVVSWNTMISA 385
           + +S +     +  +  D G+    Y  K   +  +  L  V E    RD+VSWNT+IS 
Sbjct: 111 NQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISG 170

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
             QNG+ ++ LM+V EM       DS T++++L   +   N   GK+ H Y +R+G   +
Sbjct: 171 NAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD 230

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + S LIDMYAK   +  + ++F        D  +WN++IAG  QNG+ +E    F+QM
Sbjct: 231 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQ--HDGISWNSIIAGCVQNGMFDEGLKFFQQM 288

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L   + PN V+ +S++PAC  +  + LGKQLHG+ IR   D NVF+ ++L+DMY+K G I
Sbjct: 289 LIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNI 348

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F K+   + V++T MI+GY  HG +  A+SLF+ M+  G++P+ + F+AVL+AC
Sbjct: 349 RTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 408

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S+AGLVDE  + F+ M Q+Y+I P  EHY  VAD+LGRVG++ EAYEF+ ++  E     
Sbjct: 409 SHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTG-S 467

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +W +LL +CR+H + ELAE V+KKL  +D +N   G +VLLSNIY+  G W++  K+R  
Sbjct: 468 VWSTLLAACRVHKNIELAEKVSKKLFTVDPQN--IGAYVLLSNIYSAAGRWKDARKLRIA 525

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           MR++G++K+  CSWI++   V+ F + D+ HP   +I E L+ L  +M   G
Sbjct: 526 MRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREG 577



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 159/306 (51%), Gaps = 23/306 (7%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++F+ + +   V WNT+I G   N +  +A+++  +M  +      D++T SSVL   A
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNAD--LRPDSFTLSSVLPIFA 207

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  NL  GK +H + IR   +   F+ +SL++MY+ C                  ++ D 
Sbjct: 208 EYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC------------------TRVDD 249

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
            C+VF  + + + ++WN+I++  V+   + E ++ F+ ML   I+P+ +SF ++ PA + 
Sbjct: 250 SCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAH 309

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L        ++G +++  S +  ++F+AS+ + MYA+ G    AR IFD     +   W 
Sbjct: 310 LTTLHLGKQLHGYIIR--SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 367

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  + H  +AI LF + +E++ +  + V F++ L+A S    +D   +    + +
Sbjct: 368 AMIMGYALHGHAYDAISLF-KRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 426

Query: 359 NFVALP 364
           ++  +P
Sbjct: 427 DYRIIP 432



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 127/548 (23%), Positives = 225/548 (41%), Gaps = 133/548 (24%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS-------- 157
           D+  + SVLK+C   ++LR G++VH   IR       +  N+L+NMYS   S        
Sbjct: 9   DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQR 68

Query: 158 SLDAEMVG----LKYVEVDYSKYDLVC-----------------------------KVFD 184
             D++M+G     + +    + +DL C                             KVFD
Sbjct: 69  FCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFD 128

Query: 185 -------------------TMRR-------RNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                              ++R+       R++V+WNT++S   +   + +A+   R M 
Sbjct: 129 EGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG 188

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
              +RP + +  +V P  +   +      ++G  ++ G  Y  D+F+ SS I MYA+   
Sbjct: 189 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNG--YDADVFIGSSLIDMYAKCTR 246

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D + ++F    + +   WN++I G VQN    E ++ F Q+L + +I  + V+F S + 
Sbjct: 247 VDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQML-IAKIKPNHVSFSSIMP 305

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVS 378
           A + L  L LG+QLH YII++     V + +A+++                     D+VS
Sbjct: 306 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 365

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W  MI  +  +G   + + L   M+ +G   + V   A+L+A S+               
Sbjct: 366 WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH--------------- 410

Query: 439 RHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR---DQATWNAMIAGYTQNGLLE 495
                              +GL+  A + F       R       + A+     + G LE
Sbjct: 411 -------------------AGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLE 451

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSL 554
           EA+     M   ++ P     +++L AC    NIEL +++      + +D QN+     L
Sbjct: 452 EAYEFISDM---HIEPTGSVWSTLLAACRVHKNIELAEKVS--KKLFTVDPQNIGAYVLL 506

Query: 555 IDMYSKSG 562
            ++YS +G
Sbjct: 507 SNIYSAAG 514


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 319/559 (57%), Gaps = 27/559 (4%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           Y +++FV S+ + +Y +     +ARK+FD   ER+T +WNTMI G V+N    ++I+LF 
Sbjct: 139 YGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFR 198

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA-----------YIIKNFVAL---- 363
           +++  D +  D  T  + L A ++LQEL +G  +             Y++   ++L    
Sbjct: 199 EMVA-DGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC 257

Query: 364 -----PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                  ++   +   D++++N MIS F  NG  +  + L  E+   G  + S T+  L+
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
              S   +  +    H + ++ GI     + +    +Y K   I  AR +F+  +S ++ 
Sbjct: 318 PLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFD--ESPEKT 375

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              WNAMI+GYTQNG  E A   F++M++   TPN VTI ++L AC  +G++  GK +H 
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHH 435

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
                 L+ N++V T+L+DMY+K G I+ A  +F  + EKN+VT+ TMI GYG HG    
Sbjct: 436 LIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           AL L+  M   G  P A+TF++VL ACS+AGLV EG +IF  M  +Y+I+P  EHY C+ 
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMV 555

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G++ +A EF+K++  E     +WG+LLG+C +H  +++A + +++L E+D  + 
Sbjct: 556 DILGRSGQLEKALEFIKKMPVEPGP-AVWGTLLGACMIHKDTDIARLASERLFELDPGSV 614

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GY+VLLSNIY+ E N+     +R+ +++R L K  GC+ I+V G  + F S D+ H  
Sbjct: 615 --GYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSH 672

Query: 778 SHKIYEMLERLAMEMRNAG 796
           +  IY  LE+L  +MR  G
Sbjct: 673 ATDIYAKLEKLTGKMREMG 691



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 265/545 (48%), Gaps = 59/545 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LF S+ +P   ++N ++ GF  N+ P  +I LY+ +++++   S DN+TY+  + AC
Sbjct: 63  ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNL-SPDNFTYAFAVAAC 121

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  ++L +   +H H I      + FV ++L+++Y              K+  V Y++  
Sbjct: 122 SNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYC-------------KFSRVVYAR-- 163

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD M  R+ V WNT+++  VK   + ++++ FR M+  G+R  + +   V PA +
Sbjct: 164 ---KVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA 220

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L + K    +  L +K+G  + +  +V +  I +Y++ G  + AR +F      +   +
Sbjct: 221 ELQELKVGMGIQCLALKIGFGFCD--YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAY 278

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  N     +++LF ++L   E V    T +  +   S    L L   +H + +
Sbjct: 279 NAMISGFTANGGTECSVKLFRELLFSGERV-SSSTIVGLIPLHSPFGHLHLACSIHGFCV 337

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K+ + L   V  A                      E+ VV+WN MIS + QNG  +  + 
Sbjct: 338 KSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAIS 397

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME------SYL 451
           L  EM K  F  ++VT+T +LSA + L +   GK  H     H I  E +E      + L
Sbjct: 398 LFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-----HLIKSENLEPNIYVSTAL 452

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAK G I  A Q+F+     +++  TWN MI GY  +G   EA   + +ML     P
Sbjct: 453 VDMYAKCGNISEAWQLFD--SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNP 510

Query: 512 NVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           + VT  SVL AC+  G +  G+++ H    +Y ++  +     ++D+  +SG +  A   
Sbjct: 511 SAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEF 570

Query: 571 FAKIP 575
             K+P
Sbjct: 571 IKKMP 575



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 213/445 (47%), Gaps = 49/445 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+  R   AR++FD +    TV+WNT+I G V N    ++I L+ +M         D+ T
Sbjct: 154 CKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADG--VRVDSST 211

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            ++VL A AE + L++G  + C  ++       +V   L+++YS C     A +      
Sbjct: 212 VTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARL------ 265

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +F  + R +++A+N ++S +        +V+ FR +L  G R S+ + 
Sbjct: 266 ------------LFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTI 313

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V + P  S  G    A  ++G  VK G   + +  V+++   +Y +L   D AR +FD  
Sbjct: 314 VGLIPLHSPFGHLHLACSIHGFCVKSG--IILNPTVSTAFTAIYNKLNEIDLARHLFDES 371

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+    WN MI GY QN     AI LF ++++  E   + VT  + LSA +QL  L  G
Sbjct: 372 PEKTVVAWNAMISGYTQNGSTETAISLFKEMMK-TEFTPNAVTITTILSACAQLGSLSFG 430

Query: 350 QQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           + +H ++IK+       +V+  ++              + +++ E++ V+WNTMI  +  
Sbjct: 431 KWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGL 489

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGM 447
           +G   E L L  EM   G+   +VT  ++L A S+      G++  H  + ++ I    +
Sbjct: 490 HGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIE-PLI 548

Query: 448 ESY--LIDMYAKSGLIKTARQIFEK 470
           E Y  ++D+  +SG ++ A +  +K
Sbjct: 549 EHYACMVDILGRSGQLEKALEFIKK 573



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 23/217 (10%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
            IH        +  PT+ +  + I  +     LAR LFD     T V WN +I G+  N 
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRF 143
               AI L+ +M K+  +T  +  T +++L ACA+  +L  GK VH H I+  +  P+ +
Sbjct: 391 STETAISLFKEMMKTE-FTP-NAVTITTILSACAQLGSLSFGKWVH-HLIKSENLEPNIY 447

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           V  +L++MY+ C +  +A                   ++FD+M  +N V WNT++  Y  
Sbjct: 448 VSTALVDMYAKCGNISEA------------------WQLFDSMSEKNTVTWNTMIFGYGL 489

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
                EA++ +  ML +G  PS ++F++V  A S  G
Sbjct: 490 HGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAG 526



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 18/219 (8%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-----GMESYLIDMYAKSGLIKTARQI 467
           T+ +L++ AS   +     QTHA  + +G  F+      +   L D  A     + AR +
Sbjct: 14  TLFSLINKASTFPHL---AQTHAQFILNGYRFDLATLTKLTQKLFDFSAT----RHARAL 66

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPM 526
           F        D   +N ++ G++ N     +   +  +  + N++P+  T A  + AC+  
Sbjct: 67  FF--SVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSND 124

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
            ++ L   LH  SI      NVFVG++L+D+Y K   + YA  VF  +PE+++V + TMI
Sbjct: 125 KHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMI 181

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            G  ++   + ++ LFR M   G+  D+ T  AVL A +
Sbjct: 182 NGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAA 220


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 218/709 (30%), Positives = 371/709 (52%), Gaps = 48/709 (6%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L+AC ++++L   K +H HF++  SN    V + L  +Y +C              
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC-------------- 56

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
               ++  L  ++FD +   +V+ WN I+  Y     +  A+  +  ML +G+RP+  ++
Sbjct: 57  ----NQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTY 112

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A S L   +    ++      G E  +D+FV ++ +  YA+ G    A+++F + 
Sbjct: 113 PFVLKACSGLLAIEDGVEIHSHAKMFGLE--SDVFVCTALVDFYAKCGILVEAQRLFSSM 170

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             R+   WN MI G        +A++L +Q+ E + I  +  T +  L  V + + L  G
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE-EGICPNSSTIVGVLPTVGEAKALGHG 229

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           + LH Y ++      V+V   +++                    R+ VSW+ MI  +V +
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXS 289

Query: 390 GLDDEGLMLVYEMQKQGFMIDS-VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
               E L L  +M  +  M  + VT+ ++L A + L +   G++ H Y+++ G   +  +
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILL 349

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ MYAK G+I  A + F+  +   +D  +++A+++G  QNG    A   FR M   
Sbjct: 350 GNTLLSMYAKCGVIDDAIRFFDXMNP--KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + P++ T+  VLPAC+ +  ++ G   HG+ I      +  +  +LIDMYSK G I++A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF ++   + V++  MI+GYG HG+   AL LF  +   G++PD ITF+ +LS+CS++
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV EG   FD M +++ I P  EH  C+ D+LGR G + EA+ F++ +  E +V  IW 
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV-RIWS 586

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL +CR+H + EL E V+KK+  +   ++  G  VLLSNIY+  G W++   +R   ++
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPEST--GNFVLLSNIYSAAGRWDDAAHIRITQKD 644

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            GL+K  GCSWI++ G V+ F   DQ H Q  +I   LE L +EM+  G
Sbjct: 645 WGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 291/619 (47%), Gaps = 59/619 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLK 115
           LAR+LFD I  P+ ++WN II  +  N  P++ AI LY  M         + YTY  VLK
Sbjct: 61  LARRLFDEIPNPSVILWNQIIRAYAWNG-PFDGAIDLYHSMLHLGVRP--NKYTYPFVLK 117

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC+    +  G  +H H          FV  +L++ Y+ C   ++A+             
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ------------- 164

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                ++F +M  R+VVAWN +++         +AV+    M   GI P++ + V V P 
Sbjct: 165 -----RLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           +           ++G  V+    + N + V +  + MYA+  C  +ARKIFD    RN  
Sbjct: 220 VGEAKALGHGKALHGYCVR--RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MIGGYV ++   EA+ELF Q++  D +    VT  S L A ++L +L  G++LH Y
Sbjct: 278 SWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           IIK    L +++ N ++                     +D VS++ ++S  VQNG     
Sbjct: 338 IIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVA 397

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDM 454
           L +   MQ  G   D  T+  +L A S+L     G  +H YL+  G   + +  + LIDM
Sbjct: 398 LSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 457

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K G I  AR++F + D    D  +WNAMI GY  +GL  EA   F  +L   + P+ +
Sbjct: 458 YSKCGKISFAREVFNRMDR--HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDI 515

Query: 515 TIASVLPACNPMGNIELGK-----QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           T   +L +C+  G +  G+         FSI   ++  +     ++D+  ++G+I+ A +
Sbjct: 516 TFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CMVDILGRAGLIDEAHH 571

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
               +P E +   ++ ++     H   E    + + ++  G E     FV + +  S AG
Sbjct: 572 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG-NFVLLSNIYSAAG 630

Query: 629 LVDEGLQIFDLMQQEYKIQ 647
             D+   I  + Q+++ ++
Sbjct: 631 RWDDAAHI-RITQKDWGLK 648


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 218/709 (30%), Positives = 372/709 (52%), Gaps = 48/709 (6%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L+AC ++++L   K +H HF++  SN    V + L  +Y +C              
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC-------------- 56

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
               ++  L  ++FD +   +V+ WN I+  Y     +  A+  +  ML +G+RP+  ++
Sbjct: 57  ----NQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTY 112

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A S L   +    ++      G E  +D+FV ++ +  YA+ G    A+++F + 
Sbjct: 113 PFVLKACSGLLAIEDGVEIHSHAKMFGLE--SDVFVCTALVDFYAKCGILVEAQRLFSSM 170

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             R+   WN MI G        +A++L +Q+ E + I  +  T +  L  V + + L  G
Sbjct: 171 SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQE-EGICPNSSTIVGVLPTVGEAKALGHG 229

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           + LH Y ++      V+V   +++                    R+ VSW+ MI  +V +
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 289

Query: 390 GLDDEGLMLVYEMQKQGFMIDS-VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
               E L L  +M  +  M  + VT+ ++L A + L +   G++ H Y+++ G   +  +
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILL 349

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+ MYAK G+I  A + F++ +   +D  +++A+++G  QNG    A   FR M   
Sbjct: 350 GNTLLSMYAKCGVIDDAIRFFDEMNP--KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + P++ T+  VLPAC+ +  ++ G   HG+ I      +  +  +LIDMYSK G I++A
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFA 467

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF ++   + V++  MI+GYG HG+   AL LF  +   G++PD ITF+ +LS+CS++
Sbjct: 468 REVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHS 527

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV EG   FD M +++ I P  EH  C+ D+LGR G + EA+ F++ +  E +V  IW 
Sbjct: 528 GLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV-RIWS 586

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL +CR+H + EL E V+KK+  +   ++  G  VLLSNIY+  G W++   +R   ++
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPEST--GNFVLLSNIYSAAGRWDDAAHIRITQKD 644

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            GL+K  GCSWI++ G V+ F   DQ H Q  +I   LE L +EM+  G
Sbjct: 645 WGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 175/619 (28%), Positives = 291/619 (47%), Gaps = 59/619 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLK 115
           LAR+LFD I  P+ ++WN II  +  N  P++ AI LY  M         + YTY  VLK
Sbjct: 61  LARRLFDEIPNPSVILWNQIIRAYAWNG-PFDGAIDLYHSMLHLGVRP--NKYTYPFVLK 117

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC+    +  G  +H H          FV  +L++ Y+ C   ++A+             
Sbjct: 118 ACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQ------------- 164

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                ++F +M  R+VVAWN +++         +AV+    M   GI P++ + V V P 
Sbjct: 165 -----RLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPT 219

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           +           ++G  V+    + N + V +  + MYA+  C  +ARKIFD    RN  
Sbjct: 220 VGEAKALGHGKALHGYCVR--RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MIGGYV ++   EA+ELF Q++  D +    VT  S L A ++L +L  G++LH Y
Sbjct: 278 SWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCY 337

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           IIK    L +++ N ++                     +D VS++ ++S  VQNG     
Sbjct: 338 IIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVA 397

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDM 454
           L +   MQ  G   D  T+  +L A S+L     G  +H YL+  G   + +  + LIDM
Sbjct: 398 LSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDM 457

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K G I  AR++F + D    D  +WNAMI GY  +GL  EA   F  +L   + P+ +
Sbjct: 458 YSKCGKISFAREVFNRMDR--HDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDI 515

Query: 515 TIASVLPACNPMGNIELGK-----QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           T   +L +C+  G +  G+         FSI   ++  +     ++D+  ++G+I+ A +
Sbjct: 516 TFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI----CMVDILGRAGLIDEAHH 571

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
               +P E +   ++ ++     H   E    + + ++  G E     FV + +  S AG
Sbjct: 572 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG-NFVLLSNIYSAAG 630

Query: 629 LVDEGLQIFDLMQQEYKIQ 647
             D+   I  + Q+++ ++
Sbjct: 631 RWDDAAHI-RITQKDWGLK 648


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 213/637 (33%), Positives = 345/637 (54%), Gaps = 39/637 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F+T+     +AW +++  Y       +++  F  ML  G+ P    F +V  A + L 
Sbjct: 63  RLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLM 122

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD-------FARKIFDNCLERN 293
           D    + ++G ++++G ++  DL+  ++ + MY++L            A ++ D   ER 
Sbjct: 123 DLNLGESLHGYIIRVGLDF--DLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERT 180

Query: 294 TEV--WNTMIGGYVQNNHPVEAI---------ELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             V   + ++G   +    +EA          E   QVLE+D             S   +
Sbjct: 181 RSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEID---------YKPRSEYRE 231

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
           ++  +LGQQ+        V     +   + E+D+VSWNT+I+   +NGL  E L +V EM
Sbjct: 232 MEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREM 291

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLI 461
                  DS T++++L   +   +   GK+ H   +R G+  E  + S LIDMYAK   +
Sbjct: 292 GGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRV 351

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             + ++F      +RD  +WN++IAG  QNGL +E    FRQML   + P   + +S++P
Sbjct: 352 VDSYRVFTL--LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMP 409

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC  +  + LGKQLHG+  R   D+N+F+ +SL+DMY+K G I  A  +F ++  ++ V+
Sbjct: 410 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS 469

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T MI+G   HG +  A+ LF  MK  GIEP+ + F+AVL+ACS+AGLVDE  + F+ M 
Sbjct: 470 WTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 529

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV--KELGEEGNVLEIWGSLLGSCRLHGHS 699
            ++ I P  EHY  V+D+LGR G++ EAY+F+    +G  G+V   W +LL +CR+H + 
Sbjct: 530 LDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSV---WATLLSACRVHKNV 586

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           ++AE VA ++LE+D +N+  G ++LL+NIY+    W+   K R  +R  G+RK   CSWI
Sbjct: 587 DMAEKVANRILEVDPKNT--GAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWI 644

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V   V  F + D+ HP   KI E +E L   M   G
Sbjct: 645 EVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEG 681



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 248/544 (45%), Gaps = 61/544 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H + +LF+++  P  + W ++I  +  + LP++++  +  M  S  Y   D+  + SVLK
Sbjct: 59  HDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYP--DHNVFPSVLK 116

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA   +L +G+++H + IR   +   +  N+L+NMYS            L++++    +
Sbjct: 117 ACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSK-----------LRFLKKSGRQ 165

Query: 176 YDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                +V D M  R R+V   + +V       R V  +  F   +    R      + + 
Sbjct: 166 RLGASQVLDEMTERTRSVRTASVLVG---NQGRKVSDIEAFNYDVSCRSREFEAQVLEI- 221

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
                  DYK       +      + + D+  + S           D  RKIF+   E++
Sbjct: 222 -------DYKPRSEYREMEACNLGQQIKDISHSMSV----------DSVRKIFEMMPEKD 264

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WNT+I G  +N    E + + V+ +    +  D  T  S L  +++  ++  G+++H
Sbjct: 265 LVSWNTIIAGNARNGLYGETLTM-VREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIH 323

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
              I+  +   V V +++I                    ERD +SWN++I+  VQNGL D
Sbjct: 324 GCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFD 383

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           EGL    +M        S + ++++ A ++L    +GKQ H Y+ R+G      + S L+
Sbjct: 384 EGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLV 443

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G I+TARQIF++     RD  +W AMI G   +G   +A   F QM    + PN
Sbjct: 444 DMYAKCGNIRTARQIFDRMRL--RDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPN 501

Query: 513 VVTIASVLPACNPMGNI-ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            V   +VL AC+  G + E  K  +  ++ + +   V    ++ D+  ++G +  A +  
Sbjct: 502 YVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 561

Query: 572 AKIP 575
             +P
Sbjct: 562 CGMP 565


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/603 (34%), Positives = 346/603 (57%), Gaps = 39/603 (6%)

Query: 224 PSTISFVNVFPA------LSSLGDYKSADVVYGLLVK---LGSEYVNDLFVASSAIFMYA 274
           P+  + +++FP       L      +  + ++  L+K   L    V +  + S+AI +  
Sbjct: 13  PTAKTSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPT 72

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
            +   D+A  IF    E ++  +N MI G+     P EAI LF ++ E + +  D+ TF 
Sbjct: 73  SM---DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHE-NSVQPDEFTFP 128

Query: 335 SALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIER 374
             L   S+LQ L  G+Q+HA I+K       FV   +I              V + + ER
Sbjct: 129 CILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER 188

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           +V +WN+M + + ++G  +E + L +EM +     D VT+ ++L+A   L + ++G+  +
Sbjct: 189 NVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWIN 248

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            Y+   G+     + + L+DMYAK G + TAR++F++ D   RD   W+AMI+GY+Q   
Sbjct: 249 RYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDR--RDVVAWSAMISGYSQASR 306

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             EA   F +M + N+ PN +T+ S+L +C  +G +E GK +H F  +  +   V +GT+
Sbjct: 307 CREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTA 366

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L+D Y+K G +  +  VF K+P KN +++T +I G   +G  ++AL  F  M    +EP+
Sbjct: 367 LMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPN 426

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +TF+ VLSACS+AGLVDEG  +F  M +++ I+P  EHY C+ D+LGR G + EA++F+
Sbjct: 427 DVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFI 486

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
           K +  + N + IW +LL SC++H + E+ E   K+L+ ++  +S  G ++LLSNIYA  G
Sbjct: 487 KNMPIQPNAV-IWRTLLASCKVHKNVEIGEESLKQLIILEPTHS--GDYILLSNIYASVG 543

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            WE+  KVR EM+E+G++K  GCS I++ G ++ F ++D  H QS +IY  +E +  +++
Sbjct: 544 RWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIK 603

Query: 794 NAG 796
           +AG
Sbjct: 604 SAG 606



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 250/526 (47%), Gaps = 63/526 (11%)

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D    +F  +   +  A+N ++  +   +   EA+  F+ M    ++P   +F  +    
Sbjct: 75  DYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVC 134

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S L      + ++ L++K G  + +  FV ++ I MYA  G  + AR++FD   ERN   
Sbjct: 135 SRLQALSEGEQIHALIMKCG--FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRT 192

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M  GY ++ +  E ++LF ++LELD I FD+VT +S L+A  +L +L+LG+ ++ Y+
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELD-IRFDEVTLVSVLTACGRLADLELGEWINRYV 251

Query: 357 -IKNFVALPVIV-------------------LNAVIERDVVSWNTMISAFVQNGLDDEGL 396
             K     P ++                    + +  RDVV+W+ MIS + Q     E L
Sbjct: 252 EEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREAL 311

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            L +EMQK     + +T+ ++LS+ + L   + GK  H ++ +  +     + + L+D Y
Sbjct: 312 DLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFY 371

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G ++++ ++F K     ++  +W  +I G   NG  ++A   F  MLE NV PN VT
Sbjct: 372 AKCGSVESSIEVFGKMPV--KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
              VL AC+  G ++ G+ L                   + M    G+            
Sbjct: 430 FIGVLSACSHAGLVDEGRDL------------------FVSMSRDFGI------------ 459

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E     Y  M+   G+ G+ E A    ++M    I+P+A+ +  +L++C     V+ G +
Sbjct: 460 EPRIEHYGCMVDILGRAGLIEEAFQFIKNMP---IQPNAVIWRTLLASCKVHKNVEIGEE 516

Query: 636 IFDLMQQEYKIQPS-TEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
               ++Q   ++P+ +  Y  ++++   VG+  +A +   E+ E+G
Sbjct: 517 S---LKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKG 559



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 229/471 (48%), Gaps = 48/471 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F  I  P +  +N +I GF     P+EAILL+ +M ++S     D +T+  +LK C
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS--VQPDEFTFPCILKVC 134

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  + L  G+ +H   ++C      FV N+L++MY+ C              EV+ ++  
Sbjct: 135 SRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANC-------------GEVEVAR-- 179

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RNV  WN++ + Y K+  + E V+ F  ML + IR   ++ V+V  A  
Sbjct: 180 ---RVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACG 236

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L D +  + +   + + G +   +  + +S + MYA+ G  D AR++FD    R+   W
Sbjct: 237 RLADLELGEWINRYVEEKGLK--GNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAW 294

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + MI GY Q +   EA++LF ++ + + I  +++T +S LS+ + L  L+ G+ +H +I 
Sbjct: 295 SAMISGYSQASRCREALDLFHEMQKAN-IDPNEITMVSILSSCAVLGALETGKWVHFFIK 353

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K  + L V +  A+++                    ++V+SW  +I     NG   + L 
Sbjct: 354 KKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALE 413

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEGMESY--LIDM 454
             Y M ++    + VT   +LSA S+    D G+     + R  GI    +E Y  ++D+
Sbjct: 414 YFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE-PRIEHYGCMVDI 472

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
             ++GLI+ A Q F KN     +   W  ++A    +  +E    + +Q++
Sbjct: 473 LGRAGLIEEAFQ-FIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLI 522



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 186/415 (44%), Gaps = 36/415 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR++FD ++      WN++  G+  +    E + L+ +M +       D  T  S
Sbjct: 173 GEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELD--IRFDEVTLVS 230

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC    +L +G+ ++ +        +  +  SL++MY+ C                 
Sbjct: 231 VLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKC----------------- 273

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + D   ++FD M RR+VVAW+ ++S Y +  R  EA+  F  M +  I P+ I+ V++
Sbjct: 274 -GQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSI 332

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + + LG  ++   V+  + K   +    L   ++ +  YA+ G  + + ++F     +
Sbjct: 333 LSSCAVLGALETGKWVHFFIKKKRMKLTVTL--GTALMDFYAKCGSVESSIEVFGKMPVK 390

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  +I G   N    +A+E F  +LE + +  +DVTF+  LSA S    +D G+ L
Sbjct: 391 NVLSWTVLIQGLASNGQGKKALEYFYLMLEKN-VEPNDVTFIGVLSACSHAGLVDEGRDL 449

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              + ++F           IE  +  +  M+    + GL +E    +  M  Q    ++V
Sbjct: 450 FVSMSRDF----------GIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQP---NAV 496

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
               LL++    +N ++G+++   L+       G    L ++YA  G  + A ++
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKV 551


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 220/728 (30%), Positives = 391/728 (53%), Gaps = 53/728 (7%)

Query: 69  TTVIWNTIIIGF-VCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           T  +WNT+I    +  N  ++    Y++M +       D++T+  VLK C+++ ++  G 
Sbjct: 122 TAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRG--VQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 128 AVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR 187
            VH    +   +   +V N+LL +Y  C    DA                   ++FD M 
Sbjct: 180 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR------------------RLFDEMP 221

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
            R+VV+WNTI+        Y EA    F M+LR  I+P+ +S +++ P  ++L D +   
Sbjct: 222 ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTR 281

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++   VK+G +  + +   ++ +  Y + G      ++F+  +E+N   WN++I G   
Sbjct: 282 RIHCYSVKVGLD--SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLAC 339

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
                +A+  F  +++      + VT  S L  + +L+    G+++H + ++      + 
Sbjct: 340 KGRCWDALNAFRMMIDAGAQP-NSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIF 398

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           + N++I+                    R++VSWN MI+ +  N L  E +  V +MQ+ G
Sbjct: 399 IANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETG 458

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTAR 465
              ++VT T +L A + L     GK+ HA  +R G+  +   S  LIDMYAK G + +AR
Sbjct: 459 ECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR 518

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F   ++  +D+ ++N +I GY++     ++   F +M      P+VV+   V+ AC  
Sbjct: 519 NVF---NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACAN 575

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  ++ GK++HG ++R  L  ++FV  SL+D Y+K G I+ A  +F +I  K+  ++ TM
Sbjct: 576 LAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTM 635

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           ILGYG  G  E A+S+F +M+   ++ D ++++AVLSACS+ GLV+ G Q F  M  + +
Sbjct: 636 ILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-R 694

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           ++P+  HY C+ D+LGR G V EA + +++L    +   IWG+LLG+CR++G+ EL    
Sbjct: 695 LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDA-NIWGALLGACRIYGNVELGRRA 753

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ L E+  ++   GY++LLSNIYAE G W+  +K+R+ M+ RG +K  GCSW+ +   V
Sbjct: 754 AEHLFELKPQHC--GYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQV 811

Query: 766 NRFASKDQ 773
           + F ++++
Sbjct: 812 HAFVAEER 819



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/556 (28%), Positives = 267/556 (48%), Gaps = 52/556 (9%)

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y + ++L  C++ ++L   K VH                 +LN +     SL A ++   
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHAL--------------GILNGFLPRSVSLCASLI--- 97

Query: 168 YVEVDYSKYD---LVCKVFDTMRR--RNVVAWNTIVSWY-VKTERYVEAVRQFRMMLRMG 221
              ++Y+K+      C +F+   +  R    WNT++  + +      +    +  M+R G
Sbjct: 98  ---LNYAKFQHPGSFCSLFNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRG 154

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++    +F  V    S   D      V+G++ KLG  +  D++V ++ + +Y   G  + 
Sbjct: 155 VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLG--FDTDVYVGNTLLMLYGNCGFLND 212

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD   ER+   WNT+IG    N    EA   +  ++    I  + V+ +S L   +
Sbjct: 213 ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISA 272

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAV--------------------IERDVVSWNT 381
            L++ ++ +++H Y +K  +   V   NA+                    +E++ VSWN+
Sbjct: 273 ALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNS 332

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+     G   + L     M   G   +SVT++++L     L     GK+ H + +R G
Sbjct: 333 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 392

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + + LIDMYAKSG    A  IF   D   R+  +WNAMIA Y  N L  EA   
Sbjct: 393 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDR--RNIVSWNAMIANYALNRLPLEAIRF 450

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
             QM E    PN VT  +VLPAC  +G +  GK++H   +R  L  ++FV  SLIDMY+K
Sbjct: 451 VIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAK 510

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G ++ A NVF     K+ V+Y  +I+GY +     ++L+LF  M+  G +PD ++FV V
Sbjct: 511 CGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGV 569

Query: 621 LSACSYAGLVDEGLQI 636
           +SAC+    + +G ++
Sbjct: 570 ISACANLAALKQGKEV 585



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 294/648 (45%), Gaps = 85/648 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V WNTII     N    EA   Y  M   S     +  +  S+L   
Sbjct: 213 ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP-NLVSVISLLPIS 271

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +  + + +HC+ ++   +      N+L++ Y  C  S+ A                
Sbjct: 272 AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKC-GSVKA---------------- 314

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
            + +VF+    +N V+WN+I++      R  +A+  FRMM+  G +P++++  ++ P L 
Sbjct: 315 -LWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLV 373

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L  +K+   ++G  +++G+E   D+F+A+S I MYA+ G    A  IF N   RN   W
Sbjct: 374 ELECFKAGKEIHGFSMRMGTE--TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSW 431

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI  Y  N  P+EAI   +Q+ E  E   + VTF + L A ++L  L  G+++HA  +
Sbjct: 432 NAMIANYALNRLPLEAIRFVIQMQETGECP-NAVTFTNVLPACARLGFLGPGKEIHAMGV 490

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  +   + V N++I+                   +D VS+N +I  + +     + L L
Sbjct: 491 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSETDDCLQSLNL 550

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
             EM+  G   D V+   ++SA +NL     GK+ H   LR+ ++    + + L+D Y K
Sbjct: 551 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTK 610

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I  A ++F  N    +D A+WN MI GY   G LE A   F  M +  V  ++V+  
Sbjct: 611 CGRIDIACRLF--NQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYI 668

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +VL AC+  G +E G Q                               Y + + A+  E 
Sbjct: 669 AVLSACSHGGLVERGWQ-------------------------------YFSEMLAQRLEP 697

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             + YT M+   G+ G  E A  L + +    I PDA  + A+L AC   G V+ G +  
Sbjct: 698 TEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIYGNVELGRRA- 753

Query: 638 DLMQQEYKIQPS-TEHYCCVADMLGRVGKVVEA---YEFVKELGEEGN 681
              +  ++++P    +Y  ++++    G+  EA    E +K  G + N
Sbjct: 754 --AEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 799



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 40/420 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YT 109
           + G    A  +F ++ R   V WN +I  +  N LP EAI    QM+++     C N  T
Sbjct: 409 KSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETG---ECPNAVT 465

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +++VL ACA    L  GK +H   +R       FV NSL++MY+ C     A        
Sbjct: 466 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR------- 518

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF+T  R++ V++N ++  Y +T+  ++++  F  M  +G +P  +SF
Sbjct: 519 -----------NVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 566

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V V  A ++L   K    V+G  V L +   + LFV++S +  Y + G  D A ++F+  
Sbjct: 567 VGVISACANLAALKQGKEVHG--VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI 624

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L ++   WNTMI GY        AI +F + +  D + +D V++++ LSA S    ++ G
Sbjct: 625 LFKDVASWNTMILGYGMIGELETAISMF-EAMRDDTVQYDLVSYIAVLSACSHGGLVERG 683

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            Q  + +           L   +E   + +  M+    + G  +E   L+   Q+     
Sbjct: 684 WQYFSEM-----------LAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLI---QQLPIAP 729

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D+    ALL A     N ++G++   +L        G    L ++YA++G    A +I E
Sbjct: 730 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 789


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 214/636 (33%), Positives = 351/636 (55%), Gaps = 40/636 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD + R +  +WN++++ +V    +  A R  R M   G+  +T +  +   + +++G
Sbjct: 56  RLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMG 115

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  ++ L VK G    +++F A++ + MYA+ G    A ++FD   ERNT  WN +
Sbjct: 116 CSALGTQLHSLAVKAG--LADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNAL 173

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GYV++     A++LFV+ +E +  + D+ TF + L+ V+      L  QLH  I+K  
Sbjct: 174 VAGYVESGKVAPAVQLFVE-MEREGFLPDEATFAALLTVVND-STCFLMHQLHGKIVKYG 231

Query: 361 VALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            AL +IVLNA I                       D++SWN M+ A+  +G++ E +   
Sbjct: 232 SALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFF 291

Query: 400 YEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---SYLIDMY 455
             M +  G   D  + T+++SA +  R+   G   H  + ++G  FEG+    + LI MY
Sbjct: 292 ASMMRASGVQPDMYSFTSIISACAEHRDHG-GTVIHGLVSKNG--FEGVTHVCNALIAMY 348

Query: 456 AK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            +   + +++ A + F+      +D  +WN+M+ GY+Q+GL  +A   FR M   N+T +
Sbjct: 349 TRFSENCMMEDAYKCFDSLLL--KDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTD 406

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
               ++ L +C+ +  + LG+Q+HG  IR     N FV +SLI MYSKSG+++ A   F 
Sbjct: 407 EYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFE 466

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +  + +SV + +M+ GY QHG ++   SLF  M    +  D ITFV +++ACS+AGLVDE
Sbjct: 467 EADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDE 526

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G +I + M+  Y I    EHY C  D+ GR G++ +A E +  +  E + + +W +LLG+
Sbjct: 527 GSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAM-VWMTLLGA 585

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+HG+ ELA  VA  LLE + R      +VLLSN+Y+  G W +   V+KEM+ +GL K
Sbjct: 586 CRVHGNMELASDVASHLLEAEPRQH--STYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSK 643

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
             G SWI+V   V+ F ++D  HP+  +IYEML  L
Sbjct: 644 VPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLSLL 679



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 150/568 (26%), Positives = 259/568 (45%), Gaps = 53/568 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD I R     WN+++   V       A  L   M +     + + +   S L++ 
Sbjct: 54  ARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERG--LAANTFALGSALRSA 111

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A      +G  +H   ++     + F   +LL+MY+ C  + DA                
Sbjct: 112 AAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDA---------------- 155

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C++FD M  RN V+WN +V+ YV++ +   AV+ F  M R G  P   +F  +   ++
Sbjct: 156 --CRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVN 213

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV- 296
               +     ++G +VK GS     L V ++AI  Y++ G    +R+IFD   +R+  + 
Sbjct: 214 DSTCFLMHQ-LHGKIVKYGSAL--GLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLIS 270

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN M+G Y  +    EA+  F  ++    +  D  +F S +SA ++ ++   G  +H  +
Sbjct: 271 WNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRDHG-GTVIHGLV 329

Query: 357 IKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLDD 393
            KN       V NA+I                        +D VSWN+M++ + Q+GL  
Sbjct: 330 SKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSA 389

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           + L     MQ +    D    +A L + S+L    +G+Q H  ++R G      + S LI
Sbjct: 390 DALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLI 449

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY+KSG++  A + FE+ D        WN+M+ GY Q+G  +     F QMLE  V  +
Sbjct: 450 FMYSKSGILDDAMKSFEEADKS--SSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLD 507

Query: 513 VVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            +T   ++ AC+  G ++ G + L+    RY +   +      ID+Y ++G ++ A  + 
Sbjct: 508 HITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELI 567

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSERA 598
             +P E +++ + T++     HG  E A
Sbjct: 568 DSMPFEPDAMVWMTLLGACRVHGNMELA 595



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 223/480 (46%), Gaps = 51/480 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A +LFD +    TV WN ++ G+V +     A+ L+ +M++       D  T+++
Sbjct: 150 GRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLP--DEATFAA 207

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L    ++    + + +H   ++  S     V N+ +  YS C +  ++           
Sbjct: 208 LLTVVNDSTCFLMHQ-LHGKIVKYGSALGLIVLNAAITAYSQCGALANSR---------- 256

Query: 173 YSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFV 230
                   ++FD +  R ++++WN ++  Y       EA+R F  M+R  G++P   SF 
Sbjct: 257 --------RIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFT 308

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAELGCFDFARKIFDNC 289
           ++  A +   D+    V++GL+ K G E V  +  A  A++  ++E    + A K FD+ 
Sbjct: 309 SIISACAEHRDH-GGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSL 367

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L ++T  WN+M+ GY Q+    +A+  F + ++ + I  D+  F +AL + S L  L LG
Sbjct: 368 LLKDTVSWNSMLTGYSQHGLSADALRFF-RCMQSENITTDEYAFSAALRSCSDLALLRLG 426

Query: 350 QQLHAYIIK------NFVALPVI-----------VLNAVIERD---VVSWNTMISAFVQN 389
           +Q+H  +I+      NFV+  +I            + +  E D    V WN+M+  + Q+
Sbjct: 427 RQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQH 486

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME 448
           G       L  +M +    +D +T   L++A S+    D G +  +    R+GI    ME
Sbjct: 487 GKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLR-ME 545

Query: 449 SYL--IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            Y   ID+Y ++G +  A+++ +     + D   W  ++     +G +E A      +LE
Sbjct: 546 HYACGIDLYGRAGQLDKAKELIDSMPF-EPDAMVWMTLLGACRVHGNMELASDVASHLLE 604


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 216/680 (31%), Positives = 362/680 (53%), Gaps = 52/680 (7%)

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
           P   +++SL+N+Y  C S   A                   +V + M  ++V  WN  +S
Sbjct: 22  PDSHLWSSLVNVYVKCESLQCAR------------------QVLEEMPIQDVQQWNQKLS 63

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
                    EAV+ F +M    IR +   F ++  A +SLGD    + ++  + K G E 
Sbjct: 64  SANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFE- 122

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            +D+ ++++ + MY +    +   + F   +  N    N ++ G+       +   + +Q
Sbjct: 123 -SDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
           +L ++    +  TF+S L   +   +L+ G+ +H  +IK+ +     + N+++       
Sbjct: 182 LL-VEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        ERDVVSW  +I+ FV  G    GL +  +M  +GF  +  T  ++L 
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILR 299

Query: 420 AASNLRNQDVGKQTHAYLLRH---GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           + S+L + D+GKQ HA ++++   G  F G  + L+DMYAK+  ++ A  IF  N    R
Sbjct: 300 SCSSLSDVDLGKQVHAQIVKNSLDGNDFVG--TALVDMYAKNRFLEDAETIF--NRLIKR 355

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D   W  ++AGY Q+G  E+A   F QM    V PN  T+AS L  C+ +  ++ G+QLH
Sbjct: 356 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 415

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
             +I+     ++FV ++L+DMY+K G +  A  VF  +  +++V++ T+I GY QHG   
Sbjct: 416 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGG 475

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
           +AL  F +M   G  PD +TF+ VLSACS+ GL++EG + F+ + + Y I P+ EHY C+
Sbjct: 476 KALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACM 535

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+LGR GK  E   F++E+    NVL IW ++LG+C++HG+ E  E  A KL E++   
Sbjct: 536 VDILGRAGKFHEVESFIEEMKLTSNVL-IWETVLGACKMHGNIEFGERAAMKLFELEPE- 593

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
            +   ++LLSN++A +G W++V  VR  M  RG++KE GCSW++V G V+ F S D  HP
Sbjct: 594 -IDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHP 652

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           +  +I+  L+ L  ++ + G
Sbjct: 653 KIREIHLKLQDLHQKLMSVG 672



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 275/586 (46%), Gaps = 65/586 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPY---EAILLYSQMKKSSPYTSCDNYTYSSVL 114
           ARQ+ + +       WN  +      N PY   EA+ L+  M+ +      + + ++S++
Sbjct: 43  ARQVLEEMPIQDVQQWNQKLSS---ANSPYPLQEAVQLFYLMRHTR--IRLNQFIFASLI 97

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            A A   +   G+++H    +        + N+ + MY    S           VE  + 
Sbjct: 98  SAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQS-----------VENGW- 145

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 + F  M   N+ + N ++S +  TE   +  R    +L  G  P+  +F+++  
Sbjct: 146 ------QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILK 199

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
             +S GD      ++G ++K G   +N D  + +S + +YA+ G  ++A K+F    ER+
Sbjct: 200 TCASKGDLNEGKAIHGQVIKSG---INPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 256

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  +I G+V   +    + +F Q+L  +    +  TF+S L + S L ++DLG+Q+H
Sbjct: 257 VVSWTALITGFVAEGYG-SGLRIFNQMLA-EGFNPNMYTFISILRSCSSLSDVDLGKQVH 314

Query: 354 AYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           A I+KN      FV   ++              + N +I+RD+ +W  +++ + Q+G  +
Sbjct: 315 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           + +    +MQ++G   +  T+ + LS  S +   D G+Q H+  ++ G   +  + S L+
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G ++ A  +F+   S  RD  +WN +I GY+Q+G   +A  AF  ML+    P+
Sbjct: 435 DMYAKCGCVEDAEVVFDGLVS--RDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 513 VVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT   VL AC+ MG IE GK+  +  S  Y +   +     ++D+  ++G  +   +  
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 572 AKIPEKNSVTYTTMILG----YGQHGMSERALSLFRSMKGCGIEPD 613
            ++   ++V     +LG    +G     ERA     +MK   +EP+
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERA-----AMKLFELEPE 593



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 247/542 (45%), Gaps = 97/542 (17%)

Query: 60  QLFDSITRPTTVIWNTIIIGF----VCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           Q F ++        N ++ GF     C+  P   IL+   ++   P    + YT+ S+LK
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGP--RILIQLLVEGFEP----NMYTFISILK 199

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            CA   +L  GKA+H   I+   NP   ++NSL+N+Y+ C S+                 
Sbjct: 200 TCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSA----------------- 242

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            +  CKVF  +  R+VV+W  +++ +V  E Y   +R F  ML  G  P+  +F+++  +
Sbjct: 243 -NYACKVFGEIPERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRS 300

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            SSL D      V+  +VK  S   ND FV ++ + MYA+    + A  IF+  ++R+  
Sbjct: 301 CSSLSDVDLGKQVHAQIVK-NSLDGND-FVGTALVDMYAKNRFLEDAETIFNRLIKRDLF 358

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  ++ GY Q+    +A++ F+Q ++ + +  ++ T  S+LS  S++  LD G+QLH+ 
Sbjct: 359 AWTVIVAGYAQDGQGEKAVKCFIQ-MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417

Query: 356 IIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            IK       FVA  +              +V + ++ RD VSWNT+I  + Q+G   + 
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LI 452
           L     M  +G + D VT   +LSA S++   + GK+    L + +GI    +E Y  ++
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT-PTIEHYACMV 536

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+  ++G         E                                    E  +T N
Sbjct: 537 DILGRAGKFHEVESFIE------------------------------------EMKLTSN 560

Query: 513 VVTIASVLPACNPMGNIELGKQ--LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           V+   +VL AC   GNIE G++  +  F +   +D N  +   L +M++  G+ +   NV
Sbjct: 561 VLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYIL---LSNMFAAKGMWDDVTNV 617

Query: 571 FA 572
            A
Sbjct: 618 RA 619



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 159/316 (50%), Gaps = 28/316 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
           G  + A ++F  I     V W  +I GFV        + +++QM  +  +P    + YT+
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNP----NMYTF 294

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            S+L++C+   ++ +GK VH   ++   + + FV  +L++MY+      DAE        
Sbjct: 295 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAE-------- 346

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      +F+ + +R++ AW  IV+ Y +  +  +AV+ F  M R G++P+  +  
Sbjct: 347 ----------TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLA 396

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +     S +    S   ++ + +K G     D+FVAS+ + MYA+ GC + A  +FD  +
Sbjct: 397 SSLSGCSRIATLDSGRQLHSMAIKAGQS--GDMFVASALVDMYAKCGCVEDAEVVFDGLV 454

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+T  WNT+I GY Q+    +A++ F  +L+ +  V D+VTF+  LSA S +  ++ G+
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLD-EGTVPDEVTFIGVLSACSHMGLIEEGK 513

Query: 351 QLHAYIIKNFVALPVI 366
           +    + K +   P I
Sbjct: 514 KHFNSLSKIYGITPTI 529


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 197/553 (35%), Positives = 311/553 (56%), Gaps = 56/553 (10%)

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           T  W ++I  Y  +   + ++  F+Q+L   +   D   F S L + + +++L  G+ +H
Sbjct: 71  TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYP-DHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 354 AYIIKNFVALPVIVLNAVI----------------------------------------- 372
             II+  +   +   NA++                                         
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                   +RD+VSWNT+IS   QNG+ ++ LM+V EM       DS T++++L   +  
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            N   GK+ H Y +R+G   +  + S LIDMYAK   +  + ++F        D  +WN+
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYM--LPQHDGISWNS 307

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +IAG  QNG+ +E    F+QML   + PN V+ +S++PAC  +  + LGKQLHG+ IR  
Sbjct: 308 IIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSR 367

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D NVF+ ++L+DMY+K G I  A  +F K+   + V++T MI+GY  HG +  A+SLF+
Sbjct: 368 FDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFK 427

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  G++P+ + F+AVL+ACS+AGLVDE  + F+ M Q+Y+I P  EHY  VAD+LGRV
Sbjct: 428 RMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRV 487

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EAYEF+ ++  E     +W +LL +CR+H + ELAE V+KKL  +D +N   G +V
Sbjct: 488 GRLEEAYEFISDMHIEPTG-SVWSTLLAACRVHKNIELAEKVSKKLFTVDPQN--IGAYV 544

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIY+  G W++  K+R  MR++G++K+  CSWI++   V+ F + D+ HP   +I E
Sbjct: 545 LLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINE 604

Query: 784 MLERLAMEMRNAG 796
            L+ L  +M   G
Sbjct: 605 ALKVLLEQMEREG 617



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 261/589 (44%), Gaps = 90/589 (15%)

Query: 15  PTATPPPPQLPQIHS----LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI-TRPT 69
           P++     Q  Q+H+     S P P L + TI S  S +      H +  +F+S+ + PT
Sbjct: 15  PSSVKSKSQAKQLHAQILRTSLPSPSLLS-TILSIYSNL---NLLHDSLLIFNSLPSPPT 70

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
           T+ W +II  +  + L   ++  + QM  S  Y   D+  + SVLK+C   ++LR G++V
Sbjct: 71  TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYP--DHNVFPSVLKSCTLMKDLRFGESV 128

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLS---------SLDAEMVGLKYVEVDYSKYDL-- 178
           H   IR       +  N+L+NMYS   S           D       Y + +   Y L  
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
           + KVF+ M +R++V+WNT++S   +   + +A+   R M    +RP + +  +V P  + 
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
             +      ++G  ++ G  Y  D+F+ SS I MYA+    D + ++F    + +   WN
Sbjct: 249 YVNLLKGKEIHGYAIRNG--YDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           ++I G VQN    E ++ F Q+L + +I  + V+F S + A + L  L LG+QLH YII+
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQML-IAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365

Query: 359 NFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLML 398
           +     V + +A+++                     D+VSW  MI  +  +G   + + L
Sbjct: 366 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISL 425

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
              M+ +G   + V   A+L+A S+                                  +
Sbjct: 426 FKRMEVEGVKPNYVAFMAVLTACSH----------------------------------A 451

Query: 459 GLIKTARQIFEKNDSGDR---DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           GL+  A + F       R       + A+     + G LEEA+     M   ++ P    
Sbjct: 452 GLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDM---HIEPTGSV 508

Query: 516 IASVLPACNPMGNIELGKQLHG--FSIRYLLDQNVFVGTSLIDMYSKSG 562
            +++L AC    NIEL +++    F++     QN+     L ++YS +G
Sbjct: 509 WSTLLAACRVHKNIELAEKVSKKLFTVD---PQNIGAYVLLSNIYSAAG 554



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 30/234 (12%)

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           LL   S+++++   KQ HA +LR  +    + S ++ +Y+   L+  +  IF    S   
Sbjct: 11  LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPT 70

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
             A W ++I  YT +GL   +   F QML     P+     SVL +C  M ++  G+ +H
Sbjct: 71  TLA-WKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSK-----------------------------SGVINYA 567
           G  IR  +  +++   +L++MYSK                             S  +   
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
             VF  +P+++ V++ T+I G  Q+GM E AL + R M    + PD+ T  +VL
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 216/708 (30%), Positives = 372/708 (52%), Gaps = 54/708 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           VLK C    +  +GK +H   IRC  +     V  SL++MY    S +D           
Sbjct: 109 VLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGR--------- 159

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                    KVF+ M +RNVV W ++++ Y++     + +  F  M   G+ P++++F +
Sbjct: 160 ---------KVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFAS 210

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V   ++S G       V+   VK G    + +FV +S + MYA+ G  + AR +F     
Sbjct: 211 VLSVVASQGMVDLGRRVHAQSVKFGC--CSTVFVCNSLMNMYAKCGLVEEARVVFCGMET 268

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   WNT++ G V N H +EA++LF         +    T+ + +   + +++L L +Q
Sbjct: 269 RDMVSWNTLMAGLVLNGHDLEALQLFHDSRS-SITMLTQSTYATVIKLCANIKQLGLARQ 327

Query: 352 LHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNG 390
           LH+ ++K        V+ A+++                     ++VVSW  MI+  +QNG
Sbjct: 328 LHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNG 387

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ES 449
                  L   M++ G   +  T + +L+A+       +  Q HA +++       +  +
Sbjct: 388 DVPLAAALFSRMREDGVAPNDFTYSTILTASV----ASLPPQIHAQVIKTNYECTSIVGT 443

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+  Y+K    + A  IF+  D   +D  +W+AM+  Y Q G  + A   F +M  H +
Sbjct: 444 ALLASYSKLCNTEEALSIFKMID--QKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGL 501

Query: 510 TPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            PN  TI+SV+ AC +P   ++LG+Q H  SI++     + V ++L+ MY++ G I  A 
Sbjct: 502 KPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQ 561

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F +  +++ V++ +M+ GY QHG S++AL +FR M+  GIE D +TF++V+  C++AG
Sbjct: 562 CIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAG 621

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV+EG + FD M ++Y I P+ EHY C+ D+  R GK+ EA   ++ +      + +W +
Sbjct: 622 LVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPM-VWRT 680

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LLG+C++H + EL ++ A+KLL ++  +S    +VLLSNIY+  G W+  D+VRK M  +
Sbjct: 681 LLGACKVHKNVELGKLAAEKLLSLEPFDS--ATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++KE GCSWI +   V+ F + D+ HP S +IY  L  +  +++  G
Sbjct: 739 KVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEG 786



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 289/616 (46%), Gaps = 65/616 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++F+++ +   V W +++ G++ +    + + L+ +M+    +   ++ T++SVL   
Sbjct: 158 GRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWP--NSVTFASVLSVV 215

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    + +G+ VH   ++     + FV NSL+NMY+ C    +A +              
Sbjct: 216 ASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARV-------------- 261

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF---RMMLRMGIRPSTISFVNVFP 234
               VF  M  R++V+WNT+++  V     +EA++ F   R  + M  + +  + + +  
Sbjct: 262 ----VFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCA 317

Query: 235 ALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIF-DNCLER 292
            +  LG    A  ++  ++K G   Y N   V ++ +  Y++ G    A  IF      +
Sbjct: 318 NIKQLG---LARQLHSSVLKRGFHSYGN---VMTALMDAYSKAGQLGNALDIFLLMSGSQ 371

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  MI G +QN     A  LF ++ E D +  +D T+ + L+A        L  Q+
Sbjct: 372 NVVSWTAMINGCIQNGDVPLAAALFSRMRE-DGVAPNDFTYSTILTA----SVASLPPQI 426

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA +IK       IV  A++                    ++DVVSW+ M++ + Q G  
Sbjct: 427 HAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDS 486

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
           D    +  +M   G   +  T+++++ A AS     D+G+Q HA  ++H  H    + S 
Sbjct: 487 DGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSA 546

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ MYA+ G I++A+ IFE+    DRD  +WN+M++GY Q+G  ++A   FRQM    + 
Sbjct: 547 LVSMYARKGSIESAQCIFERQT--DRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIE 604

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            + VT  SV+  C   G +E G++      R Y +   +     ++D+YS++G ++ A +
Sbjct: 605 MDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMS 664

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP-DAITFVAVLSACSYA 627
           +   +      + + T++     H   E  L    + K   +EP D+ T+V + +  S A
Sbjct: 665 LIEGMSFPAGPMVWRTLLGACKVHKNVE--LGKLAAEKLLSLEPFDSATYVLLSNIYSAA 722

Query: 628 GLVDEGLQIFDLMQQE 643
           G   E  ++  LM  +
Sbjct: 723 GKWKEKDEVRKLMDTK 738



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 128/251 (50%), Gaps = 22/251 (8%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAK 573
            +  VL  C  + +  LGKQLHG  IR   D+ +V VGTSL+DMY K   +     VF  
Sbjct: 105 ALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEA 164

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +P++N VT+T+++ GY Q G     + LF  M+  G+ P+++TF +VLS  +  G+VD G
Sbjct: 165 MPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLG 224

Query: 634 LQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            ++     Q  K    +  + C  + +M  + G V EA   V   G E   +  W +L+ 
Sbjct: 225 RRVH---AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEAR--VVFCGMETRDMVSWNTLMA 279

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
              L+GH    ++ A +L   D+R+S+    +L  + YA       V K+   +++ GL 
Sbjct: 280 GLVLNGH----DLEALQLFH-DSRSSIT---MLTQSTYA------TVIKLCANIKQLGLA 325

Query: 752 KEVGCSWIDVG 762
           +++  S +  G
Sbjct: 326 RQLHSSVLKRG 336


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 234/758 (30%), Positives = 401/758 (52%), Gaps = 52/758 (6%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G P  +R +F++   P + ++  +I   V  +L   AI LY ++   S  T    + + S
Sbjct: 606  GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL--VSEKTQISKFVFPS 663

Query: 113  VLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            VL+ACA +R +L +G+ VH   I+   +    +  SLL MY    +  DAE         
Sbjct: 664  VLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAE--------- 714

Query: 172  DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     KVFD M  R++VAW+T+VS  ++    ++A+R F+ M+  G+ P  ++ ++
Sbjct: 715  ---------KVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMIS 765

Query: 232  VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
            V    + LG  + A  V+G + +   ++  D  + +S + MY++ G    + KIF+   +
Sbjct: 766  VVEGCAELGCLRIARSVHGQITRKMFDF--DETLCNSLLTMYSKCGDLLSSEKIFEKIAK 823

Query: 292  RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +N   W  MI  Y +     +A+  F ++L+   I  + VT  S LS+      +  G+ 
Sbjct: 824  KNAVSWTAMISSYNRGEFSEKALRSFSEMLK-SGIEPNLVTLYSILSSCGLNGLIREGKS 882

Query: 352  LHAYIIK-----NFVAL-PVIV---------------LNAVIERDVVSWNTMISAFVQNG 390
            +H + I+     N+ +L P +V               L+ V +R++V WN+ IS +   G
Sbjct: 883  VHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRG 942

Query: 391  LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
            +  E L L  +M       DS T+ +++SA  N     +GKQ H +++R  +  E +++ 
Sbjct: 943  MVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEFVQNS 1002

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            +IDMY+KSG +  A  +F++     R   TWN+M+ G++QNG   EA   F  M    + 
Sbjct: 1003 VIDMYSKSGFVNLACTVFDQIKH--RSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLE 1060

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             N VT  +V+ AC+ +G++E G+ +H   I   + +++F  T+LIDMY+K G +N A  V
Sbjct: 1061 INKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTAETV 1119

Query: 571  FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
            F  +  ++ V++++MI  YG HG    A+S F  M   G +P+ + F+ VLSAC ++G V
Sbjct: 1120 FRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 1179

Query: 631  DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            +EG   F+LM+  + + P++EH+ C  D+L R G + EAY  +KE+    +   +WGSL+
Sbjct: 1180 EEGKYYFNLMKL-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA-SVWGSLV 1237

Query: 691  GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
              CR+H   ++ + +   + ++ T ++  GY+ LLSNIYAEEG WE   ++R  M+   L
Sbjct: 1238 NGCRIHQKMDIIKAIKNDISDIVTDDT--GYYTLLSNIYAEEGEWEEFRRMRSAMKSLNL 1295

Query: 751  RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
            +K  G S I++   V RF + ++   Q+ +IY  L  L
Sbjct: 1296 KKVPGYSAIEIDKKVFRFGAGEETCFQTEEIYMFLGNL 1333



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 37/296 (12%)

Query: 51   QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC---DN 107
            + G  +LA  +FD I   + V WN+++ GF  N    EAI L+  M     Y SC   + 
Sbjct: 1009 KSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYM-----YHSCLEINK 1063

Query: 108  YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
             T+ +V++AC+   +L  G+ VH   I C      F   +L++MY+ C     AE     
Sbjct: 1064 VTFLAVIQACSSIGSLEKGRWVHHKLIVC-GIKDLFTDTALIDMYAKCGDLNTAE----- 1117

Query: 168  YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                          VF  M  R++V+W+++++ Y    R   A+  F  M+  G +P+ +
Sbjct: 1118 -------------TVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 1164

Query: 228  SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA-RKIF 286
             F+NV  A    G  +     + L+   G    ++ F  +  I + +  G    A R I 
Sbjct: 1165 VFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHF--ACFIDLLSRSGDLKEAYRTIK 1222

Query: 287  DNCLERNTEVWNTMIGG--YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +     +  VW +++ G    Q    ++AI+      ++ +IV DD  + + LS +
Sbjct: 1223 EMPFLADASVWGSLVNGCRIHQKMDIIKAIK-----NDISDIVTDDTGYYTLLSNI 1273


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 256/798 (32%), Positives = 404/798 (50%), Gaps = 63/798 (7%)

Query: 13  PPPTATPPPPQLPQIHSL-------SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI 65
           P   A+    QL Q+H+        + P+P  K     S+L      G    +  +F + 
Sbjct: 6   PLFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQL------GDLQSSTSVFRTF 59

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
             P + +W  ++   V N    EAI LY QM   S     ++YT+ SVL+AC+   +L +
Sbjct: 60  HSPDSFMWGVLLKSHVWNGCYQEAISLYHQML--SQQIQANSYTFPSVLRACSGFGDLGV 117

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ VH   I+   +    V  +LL++Y                 E+ Y   D   KVF  
Sbjct: 118 GQRVHGRIIKSGFDMDPVVNTALLSVYG----------------ELGY--LDSARKVFGE 159

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R++V+W++I+S  V+     E +  FR M+  G  P ++  + V  A   LG  + A
Sbjct: 160 MPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLA 219

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
              +G ++K G E  ND FV SS IFMYA+ G    A  +F+N   R+T  W  MI  Y 
Sbjct: 220 KSAHGYILKRGIE--NDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYN 277

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------ 359
              +  EA+ LFV  ++  E+  + VT    L + + L  L  G+ +H  +IKN      
Sbjct: 278 LGGYLKEALALFVS-MQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANL 336

Query: 360 ----------FVA-----LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                     + A     L   +L+ +  R +  WNT+IS + Q GL  E + L   MQK
Sbjct: 337 DCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQK 396

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           QGFM DS ++ + LSA+ N     +G Q H ++++     E + + LI+MY+K G +  A
Sbjct: 397 QGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSKCGYVDLA 456

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             IF++ +   +   TWN+MI+G +QNG   +A   F  M         V   SV+ AC+
Sbjct: 457 YMIFDQMEP--KGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G +E GK +H   I   + + +F+ T+L+DMY+K G +  A  VF  + E++ V++++
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I  YG HG     + LF  M   GI+P+ +T + VLSACS+AG V EG+  F+ M +++
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDF 633

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I+P  EH+ C+ D+L R G + EAYE +K +        IWG+LL  CR+H   ++A+ 
Sbjct: 634 GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGA-SIWGALLNGCRIHQRMDIAKN 692

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           + ++L  + T ++  G++ LLSNIYA  G W    +VR  M+  GL+K    S +++G  
Sbjct: 693 IQRELWNIQTDDT--GHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKK 750

Query: 765 VNRFASKDQEHPQSHKIY 782
             RF + D  +PQ    Y
Sbjct: 751 AYRFGAGDASYPQLKYTY 768


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 236/698 (33%), Positives = 370/698 (53%), Gaps = 59/698 (8%)

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNP-SRFVYNSLLN 150
           SQ    S +       Y S+L+ C   +++   K +H H I     S+P S  + +SL  
Sbjct: 5   SQALSKSKHLLTATARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAA 64

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            Y+    +  A                   K+FD +R  ++ +WN ++  Y  +    +A
Sbjct: 65  AYAMFGCAPHAR------------------KLFDELRNPSLFSWNAMIRMYTNSGLSYDA 106

Query: 211 VRQFRMMLRMGIR-PSTISFVNVFPALSSLGDYKSADVVYGLLVK---LGSEYVNDLFVA 266
           +  F  ML  G R P   ++  V  A    GDY   ++  G L+    + S + +D FV 
Sbjct: 107 LGLFVQMLASGRRWPDNYTYPFVIKAC---GDYLLPEM--GALIHARTVMSGFDSDAFVQ 161

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MY   G  + AR++FD   ER    WNTMI GY +N    EA+ +F  ++    I
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIG-KGI 220

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             D  T +S L   S L+EL++G+++HA +    +   + V N++++             
Sbjct: 221 EPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQM 280

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  RDVVSW TM++ ++ NG     L+L   MQ +    + VT+ ++LSA ++L +
Sbjct: 281 IFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYS 340

Query: 427 QDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
              G+  H + +R  +  E + E+ LIDMYAK   +  + ++F K  +  +  A WNA+I
Sbjct: 341 LKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSK--TSKQRTAPWNAII 398

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +G   NGL  +A   F+QML   V PN  T+ S+LPA   + +++  + +HG+ IR    
Sbjct: 399 SGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFL 458

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS--VTYTTMILGYGQHGMSERALSLFR 603
             + V T LID+YSK G +  A N+F  IP+K+   +T++ +I GYG HG  E A+SLF 
Sbjct: 459 SRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFD 518

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G++P+ ITF ++L ACS+AGLVDEGL +F  M ++ ++   T+HY CV D+LGR 
Sbjct: 519 QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRA 578

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EAYE ++ +    N   +WG+LLGSC +H + EL EV AK L E++  N+  G +V
Sbjct: 579 GRLEEAYELIRTMAFRPN-HAVWGALLGSCVIHENVELGEVAAKWLFELEPGNT--GNYV 635

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           LL+NIY+  G W + + VR  M   GLRK    S I+V
Sbjct: 636 LLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 193/683 (28%), Positives = 318/683 (46%), Gaps = 90/683 (13%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQE-----GRPHLARQLFDSITRPTT 70
           T+    P   QIH+ +  +  L +P     LS +          PH AR+LFD +  P+ 
Sbjct: 29  TSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPH-ARKLFDELRNPSL 87

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
             WN +I  +  + L Y+A+ L+ QM  S      DNYTY  V+KAC +     +G  +H
Sbjct: 88  FSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWP-DNYTYPFVIKACGDYLLPEMGALIH 146

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
              +    +   FV NSL+ MY  C      EM             ++  +VFD MR R 
Sbjct: 147 ARTVMSGFDSDAFVQNSLMAMYMNC-----GEM-------------EVARRVFDLMRERT 188

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +V+WNT+++ Y K     EA+  F  M+  GI P   + V+V P  S L + +    V+ 
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHA 248

Query: 251 LL-VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           L+ VK   E   D+ V +S + MYA+ G  D A+ IF    +R+   W TM+ GY+ N  
Sbjct: 249 LVEVKNLGE---DISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGD 305

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A+ L  Q+++ + +  + VT  S LSA + L  L  G+ LH + I+  +   VIV  
Sbjct: 306 ARSAL-LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVET 364

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           A+I+                    +    WN +IS  + NGL  + + L  +M  +    
Sbjct: 365 ALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDP 424

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIF 468
           +  T+ +LL A + L +    +  H YL+R G +    + + LID+Y+K G +++A  IF
Sbjct: 425 NDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIF 484

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                 D+D  TW+A+IAGY  +G  E A   F QM++  V PN +T  S+L AC+  G 
Sbjct: 485 NGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGL 544

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++ G  L     +++L+ N                               +  YT +I  
Sbjct: 545 VDEGLGL----FKFMLEDNQM--------------------------SLRTDHYTCVIDL 574

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE-YKIQ 647
            G+ G  E A  L R+M      P+   + A+L +C    ++ E +++ ++  +  ++++
Sbjct: 575 LGRAGRLEEAYELIRTM---AFRPNHAVWGALLGSC----VIHENVELGEVAAKWLFELE 627

Query: 648 P-STEHYCCVADMLGRVGKVVEA 669
           P +T +Y  +A++   VG+  +A
Sbjct: 628 PGNTGNYVLLANIYSAVGRWRDA 650


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 215/688 (31%), Positives = 350/688 (50%), Gaps = 91/688 (13%)

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V WN +V  +++  R   A+     MLR G +P   +      A   L  Y+S    +GL
Sbjct: 115 VWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGL 174

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE---VWNTMIGGYVQNN 308
           +   G E  +++FV ++ + MY+  G  + A  +FD    +  +    WN+++  +V+ +
Sbjct: 175 ICCNGFE--SNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGS 232

Query: 309 HPVEAIELFVQVLELDEIVF--------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +P  A++LF    E+  IV         D ++ ++ L A + L+ L   +++H+Y I+N 
Sbjct: 233 NPRTALDLFS---EMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNG 289

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
                 V NA+I+                    +DVVSWN M++ + Q+G       L  
Sbjct: 290 TFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFK 349

Query: 401 EMQKQGFMID-----------------------------------SVTVTALLSAASNLR 425
            M+K+   +D                                   SVT+ +LLSA ++L 
Sbjct: 350 NMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLG 409

Query: 426 NQDVGKQTHAYLLRHGI-------------HFEGMESYLIDMYAKSGLIKTARQIFEKND 472
               G +THAY L+  +                 + + LIDMY+K    K AR IF    
Sbjct: 410 ALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIP 469

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIE 530
             +R+  TW  MI GY Q G   +A   F +M+   + V PN  TI+ +L AC  + ++ 
Sbjct: 470 RRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLR 529

Query: 531 LGKQLHGFSIRYLLDQN--VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +GKQ+H +  R+   ++   FV   LIDMYSK G ++ A NVF  +P++N V++T+M+ G
Sbjct: 530 MGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           YG HG  + AL +F  M+  G  PD I+F+ +L ACS++G+VD+GL  FD+M+ +Y +  
Sbjct: 590 YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIA 649

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           S +HY CV D+L R G++ +A++ ++E+  E +   IW +LL +CR+H + ELAE    K
Sbjct: 650 SAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSA-AIWVALLSACRVHSNVELAEYALNK 708

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L+ M   N   G + L+SNIYA    W++V ++R+ M++ G++K  GCSW+        F
Sbjct: 709 LVSMKAEND--GSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASF 766

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              D+ HP S +IY +LERL   ++  G
Sbjct: 767 FVGDRSHPLSPEIYSLLERLIGRIKVMG 794



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 182/688 (26%), Positives = 291/688 (42%), Gaps = 151/688 (21%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           P LP    +SP    L T  + S L+  C  G    A  + + +     V WN ++   +
Sbjct: 72  PPLPSHSYVSPK--SLGTGVVASYLA--C--GATSDALSVLERVVPSPAVWWNLLVRAHI 125

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                  AI +  +M ++   T  D++T    LKAC E  + R G A H   I C    S
Sbjct: 126 EEGRLDRAIGVSCRMLRAG--TKPDHFTLPYALKACGELPSYRSGSAFH-GLICCNGFES 182

Query: 142 R-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWNTI 197
             FV N+L+ MYS   S  DA +                  VFD + R+   +V++WN+I
Sbjct: 183 NVFVCNALVAMYSRSGSLEDASL------------------VFDEITRKGIDDVISWNSI 224

Query: 198 VSWYVKTERYVEAVRQFRMMLRM------GIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+ +VK      A+  F  M  +        R   IS VN+ PA +SL        ++  
Sbjct: 225 VAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSY 284

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            ++ G+    D FV ++ I  YA+ G    A  +F+    ++   WN M+ GY Q+    
Sbjct: 285 AIRNGT--FADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFG 342

Query: 312 EAIELFVQV----LELDEIVF------------------------------DDVTFLSAL 337
            A ELF  +    + LD I +                              + VT +S L
Sbjct: 343 AAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLL 402

Query: 338 SAVSQLQELDLGQQLHAYIIKNFV------------ALPVIVLNAVI------------- 372
           SA + L  L  G + HAY +K  +               ++V NA+I             
Sbjct: 403 SACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAAR 462

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAA 421
                    ER+VV+W  MI  + Q G  ++ L L  EM  + + +  ++ T++ +L A 
Sbjct: 463 TIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMAC 522

Query: 422 SNLRNQDVGKQTHAYLLRH-----GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           ++L +  +GKQ HAY+ RH      ++F  + + LIDMY+K G + TAR +F+      R
Sbjct: 523 AHLSSLRMGKQIHAYVTRHHEYESSVYF--VANCLIDMYSKCGDVDTARNVFDSMP--KR 578

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           ++ +W +M++GY  +G  +EA   F +M +    P+ ++   +L AC+  G ++ G  L 
Sbjct: 579 NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG--LD 636

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            F I                M S  GVI  A +            Y  +I    + G  +
Sbjct: 637 YFDI----------------MRSDYGVIASAQH------------YACVIDLLARSGRLD 668

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSAC 624
           +A    + M    +EP A  +VA+LSAC
Sbjct: 669 KAWKTIQEMP---MEPSAAIWVALLSAC 693



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 241/535 (45%), Gaps = 93/535 (17%)

Query: 58  ARQLFDSITRP---TTVIWNTIIIGFVCNNLPYEAILLYSQM----KKSSPYTSCDNYTY 110
           A  +FD ITR      + WN+I+   V  + P  A+ L+S+M     + +     D  + 
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISI 262

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA--------- 161
            ++L ACA  + L   K +H + IR  +    FV N+L++ Y+ C S  DA         
Sbjct: 263 VNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEF 322

Query: 162 -EMVGLKYVEVDYS---KYDLVCKVFDTMRRRN----VVAWNTIVSWYVKTERYVEAVRQ 213
            ++V    +   Y+   K+    ++F  MR+ N    V+ W+ +++ Y +     EA+  
Sbjct: 323 KDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDT 382

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK----------LGSEYVNDL 263
           F+ M+  G  P++++ +++  A +SLG        +   +K           G     DL
Sbjct: 383 FQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDL 442

Query: 264 FVASSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
            V ++ I MY++   F  AR IF++    ERN   W  MIGGY Q     +A++LF +++
Sbjct: 443 VVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMI 502

Query: 322 ELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAYIIKN--------FVALPVI------ 366
                V  +   +S  L A + L  L +G+Q+HAY+ ++        FVA  +I      
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKC 562

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V +++ +R+ VSW +M+S +  +G   E L +  +MQK GF+ D ++   LL
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            A S           H+ ++  G+       Y   M +  G+I +A+             
Sbjct: 623 YACS-----------HSGMVDQGL------DYFDIMRSDYGVIASAQH------------ 653

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             +  +I    ++G L++A+   ++M    + P+     ++L AC    N+EL +
Sbjct: 654 --YACVIDLLARSGRLDKAWKTIQEM---PMEPSAAIWVALLSACRVHSNVELAE 703


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 219/683 (32%), Positives = 359/683 (52%), Gaps = 63/683 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYS+ + ACA++    +  ++HC  ++   +   FV + L++MYS             K+
Sbjct: 43  TYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYS-------------KH 89

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR----MGIRP 224
             +  +++     +FD M  R+ V+WN++++ Y +     EA   F  M+       +  
Sbjct: 90  DRIKEARF-----LFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLV 144

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           S  +   V  A   LG  +    V+G  VK+G  + +DLFV+ S ++MY + G  D A  
Sbjct: 145 SDFTLATVLKACGGLGCSRIGKCVHGYAVKIG--FDSDLFVSGSTVYMYCKCGILDMAGL 202

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            FD    ++   WNTMI GY QN +  EAIELF Q +EL+    +D TF   L A + + 
Sbjct: 203 AFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQ-MELEGFKPNDTTFCCVLKASTAMS 261

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
           +  +G+  HA ++K   ++ V V  A+++                    R++VS+N +I+
Sbjct: 262 DSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALIT 321

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +   G  +E L +  ++Q +G   DS T   L S+ S       G Q H + ++ G+  
Sbjct: 322 GYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDS 381

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + + +++ Y+K G   +A + FE  +    +   W  +I+G+ QNG  E+A + F +
Sbjct: 382 DVSVGNSIVNFYSKCGFTDSALEAFESINR--PNSVCWAGIISGFAQNGEGEKALMQFCK 439

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M +     +  + +SV+ A +    +E G+ LH   ++  LD  ++VG+++IDMYSK G+
Sbjct: 440 MRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGM 499

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A  VF+ +PEKN V++ +MI GY Q+G  + AL LF+ M   GI P A+TFV +L A
Sbjct: 500 VEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFA 559

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV------KELG 677
           CS+AGLV+EG   ++LM   Y I PS EH  C+ D+LGR G + EA  F+      KE G
Sbjct: 560 CSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPG 619

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
                  IWGSLL +C +H +S++    A+  L ++   S    +  LSNIYA +  W  
Sbjct: 620 -------IWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSS--YTALSNIYASKELWSE 670

Query: 738 VDKVRKEMRERGLRKEVGCSWID 760
           V ++R  M++ G+ KE GCSWI+
Sbjct: 671 VSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 256/529 (48%), Gaps = 31/529 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M   NVV W + ++   +     +A+  F  MLR GI P+ I++     A +       A
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++ L++K G  + N LFV+S  I MY++      AR +FD+  ER+   WN+MI GY 
Sbjct: 61  TSLHCLILKKG--FSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYS 118

Query: 306 QNNHPVEAIELFVQVLELDE---IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---- 358
           Q     EA  LF  ++   E   ++  D T  + L A   L    +G+ +H Y +K    
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFD 178

Query: 359 ----------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
                             + +  +  + +  +D+V+WNTMI+ + QN  ++E + L Y+M
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           + +GF  +  T   +L A++ + +  VG+  HA +L+ G   +  + + L+DMY+K   I
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           +   + F   +   R+  ++NA+I GY+  G  EEA   + Q+    + P+  T   +  
Sbjct: 299 EDVERAF--GEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFS 356

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           +C+    +  G Q+H  S+++ LD +V VG S+++ YSK G  + A   F  I   NSV 
Sbjct: 357 SCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVC 416

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +  +I G+ Q+G  E+AL  F  M+    + D  +  +V+ A S    V++G  +   + 
Sbjct: 417 WAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVM 476

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +   +  +      V DM  + G V +A +    + E+ NV+  W S++
Sbjct: 477 KS-GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEK-NVVS-WNSMI 522



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 265/556 (47%), Gaps = 62/556 (11%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN------ 107
           R   AR LFD +     V WN++I G+    L  EA  L+  M       SC+N      
Sbjct: 91  RIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSM-----INSCENWKLLVS 145

Query: 108 -YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            +T ++VLKAC      RIGK VH + ++   +   FV  S + MY  C   LD  M GL
Sbjct: 146 DFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKC-GILD--MAGL 202

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                           FD +  +++VAWNT+++ Y +     EA+  F  M   G +P+ 
Sbjct: 203 ---------------AFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPND 247

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  V  A +++ D       +  ++KLG     D+FVA++ + MY++    +   + F
Sbjct: 248 TTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSM--DVFVATALVDMYSKFYDIEDVERAF 305

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               +RN   +N +I GY       EA+ ++ Q L+ + +  D  TF+   S+ S    +
Sbjct: 306 GEMSKRNLVSFNALITGYSLMGKYEEALRVYSQ-LQSEGMEPDSFTFVGLFSSCSVSSTV 364

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G Q+H + +K  +   V V N+++                      + V W  +IS F
Sbjct: 365 AEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGF 424

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            QNG  ++ LM   +M+K     D  + ++++ A S+    + G+  HA++++ G+    
Sbjct: 425 AQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTI 484

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + S +IDMY+K G+++ A+++F      +++  +WN+MI GY QNG  +EA + F++M 
Sbjct: 485 YVGSAVIDMYSKCGMVEDAQKVFSVMP--EKNVVSWNSMITGYAQNGFCKEALLLFQEMT 542

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVI 564
              + P  VT   +L AC+  G +E G+  +   +  Y +  ++   T ++D+  ++G +
Sbjct: 543 SSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYL 602

Query: 565 NYA-----ANVFAKIP 575
             A     ++ F+K P
Sbjct: 603 EEAEAFLLSSSFSKEP 618



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 48/460 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A   FD I     V WNT+I G+  N    EAI L+ QM+        ++ T
Sbjct: 192 CKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKP--NDTT 249

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  VLKA     +  +G+  H   ++   +   FV  +L++MYS      D E       
Sbjct: 250 FCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVE------- 302

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      + F  M +RN+V++N +++ Y    +Y EA+R +  +   G+ P + +F
Sbjct: 303 -----------RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTF 351

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V +F + S          V+   VK G +  +D+ V +S +  Y++ G  D A + F++ 
Sbjct: 352 VGLFSSCSVSSTVAEGAQVHVHSVKFGLD--SDVSVGNSIVNFYSKCGFTDSALEAFESI 409

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              N+  W  +I G+ QN    +A+  F ++ +  +   D+ +  S + AVS    ++ G
Sbjct: 410 NRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKT-DEFSSSSVIKAVSSWAAVEQG 468

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           + LHA+++K+ +   + V +AVI                    E++VVSWN+MI+ + QN
Sbjct: 469 RHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQN 528

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME 448
           G   E L+L  EM   G +  +VT   +L A S+    + G+  +  ++  +GI    ME
Sbjct: 529 GFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIP-PSME 587

Query: 449 --SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             + ++D+  ++G ++ A + F  + S  ++   W ++++
Sbjct: 588 HCTCMVDLLGRAGYLEEA-EAFLLSSSFSKEPGIWGSLLS 626


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 235/772 (30%), Positives = 379/772 (49%), Gaps = 77/772 (9%)

Query: 50   CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
            C+ G    AR LFD +     V+WN ++  +V N+   EA+  +S   +S  +    N  
Sbjct: 763  CKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSN-- 820

Query: 110  YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
                               +HC                        +  +++++   +  
Sbjct: 821  -------------------LHC-----------------------VIGGVNSDVSNNRKR 838

Query: 170  EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
              +  K     K+F   +  N+ AWN  ++ ++   + V A+  F+ +LR  I   +++ 
Sbjct: 839  HAEQVKA-YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTL 897

Query: 230  VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            V +  A     D    + ++ L++K  S +   + V++S + MY++ G    A K F N 
Sbjct: 898  VIILSAAVGADDLDLGEQIHALVIK--SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE---L 346
             E +   WNTMI  Y QNN  +EAI  F  +L  D +  D  T  S L A S   E    
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTGDEGEYF 1014

Query: 347  DLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAF 386
             LG Q+H Y IK      +FV+  +I              +L+   + D+ SWN ++  +
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGY 1074

Query: 387  VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            +++    + L     M + G  ID +T+   + A+  L N   GKQ  AY ++ G + + 
Sbjct: 1075 IKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134

Query: 446  GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
             + S ++DMY K G +  A ++F   +    D+  W  MI+GY +NG  + A   +  M 
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELF--GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMR 1192

Query: 506  EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
               V P+  T A+++ A + +  +E GKQ+H   ++     + FVGTSL+DMY K G + 
Sbjct: 1193 VSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252

Query: 566  YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             A  VF K+  +  V +  M+LG  QHG  + AL+LFR+M+  GI+PD +TF+ VLSACS
Sbjct: 1253 DAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACS 1312

Query: 626  YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            ++GL  E  + FD M + Y I P  EHY C+ D LGR G++ EA   +  +  + +   +
Sbjct: 1313 HSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASA-SM 1371

Query: 686  WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
            + +LLG+CR  G +E A+ VA KLL +D  +S    +VLLSNIYA    W++V   R  M
Sbjct: 1372 YRALLGACRTKGDAETAKRVADKLLALDPSDSSA--YVLLSNIYAASRQWDDVTDARNMM 1429

Query: 746  RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
            + + ++K+ G SWIDV   V+ F   D+ HPQ+  IYE +E L   +R  G+
Sbjct: 1430 KLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGS 1481



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 187/697 (26%), Positives = 325/697 (46%), Gaps = 100/697 (14%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAIL----LYSQ 95
            T+ S+   +C       ARQ+FD  +    V WN+I+  +    +  YE +L    L+  
Sbjct: 654  TMYSKCGSLCS------ARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707

Query: 96   MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
            +++     S    T + +LK C  +  +++ + VH + ++       FV  +L+N+Y  C
Sbjct: 708  LREFG--FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIY--C 763

Query: 156  LSSLDAEMVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                               KY LV +   +FD M  R+ V WN ++  YV+     EA+R
Sbjct: 764  -------------------KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 213  QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
             F    R G           FP  S+L         + ++  + S+  N+    +  +  
Sbjct: 805  FFSAFHRSGF----------FPDFSNL---------HCVIGGVNSDVSNNRKRHAEQVKA 845

Query: 273  YA-ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
            YA ++  FD    IF          WN  +  ++     V AI+ F  +L    I  D V
Sbjct: 846  YAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLR-STIGHDSV 895

Query: 332  TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------- 372
            T +  LSA     +LDLG+Q+HA +IK+  A  V V N+++                   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 373  -ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD--- 428
             E D++SWNTMIS++ QN L+ E +    ++ + G   D  T+ ++L A S     +   
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 429  VGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            +G Q H Y ++ GI  +  + + LID+Y+K G +  A   F  +   D D A+WNA++ G
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE--FLLHGKYDFDLASWNAIMFG 1073

Query: 488  YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
            Y ++    +A   F  M E  +  + +T+A+ + A   + N++ GKQ+  ++I+   + +
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133

Query: 548  VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
            ++V + ++DMY K G +  A  +F +I   + V +TTMI GY ++G  + ALS++  M+ 
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193

Query: 608  CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGK 665
             G++PD  TF  ++ A S    +++G QI        K+  S +H+    + DM  + G 
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLDYSLDHFVGTSLVDMYCKCGS 1250

Query: 666  VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            V +AY   +++     V   W ++L     HGH + A
Sbjct: 1251 VQDAYRVFRKMDVRKVVF--WNAMLLGLAQHGHVDEA 1285



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 160/587 (27%), Positives = 272/587 (46%), Gaps = 58/587 (9%)

Query: 122  NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            +L++GK  H   +     P R++ N+L+ MYS C S   A                   +
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSAR------------------Q 667

Query: 182  VFDTMRRRNVVAWNTIVSWYVK-----TERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            VFD    R++V WN+I++ Y +      E  +E  R F ++   G   + ++   +    
Sbjct: 668  VFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLC 727

Query: 237  SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
               G  + ++ V+G  VK+G E   DLFV+ + + +Y + G    AR +FD   ER+  +
Sbjct: 728  LLSGFVQVSETVHGYAVKIGFEL--DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVL 785

Query: 297  WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL-----SAVSQLQELDLGQQ 351
            WN M+  YV+N+   EA+  F          F D + L  +     S VS  ++    +Q
Sbjct: 786  WNVMLKAYVENSFQDEALRFFSAFHR--SGFFPDFSNLHCVIGGVNSDVSNNRKRH-AEQ 842

Query: 352  LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
            + AY +K F   P          ++ +WN  ++ F+  G     +     + +     DS
Sbjct: 843  VKAYAMKMF---PFDQ-----GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894

Query: 412  VTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEK 470
            VT+  +LSAA    + D+G+Q HA +++        + + L++MY+K+G++  A + F  
Sbjct: 895  VTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI- 953

Query: 471  NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             +S + D  +WN MI+ Y QN L  EA   FR +L   + P+  T+ASVL AC+     E
Sbjct: 954  -NSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE 1012

Query: 531  ---LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
               LG Q+H ++I+  +  + FV T+LID+YSK G ++ A  +     + +  ++  ++ 
Sbjct: 1013 YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMF 1072

Query: 588  GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            GY +   S +AL  F  M   GI  D IT    + A      + +G QI     Q Y I+
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-----QAYAIK 1127

Query: 648  PSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
                +   V+    DM  + G +  A E   E+     V   W +++
Sbjct: 1128 LGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEV--AWTTMI 1172



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 212/471 (45%), Gaps = 55/471 (11%)

Query: 26   QIHSL---SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
            QIH+L   S   P +  P   S ++   + G  + A + F +      + WNT+I  +  
Sbjct: 915  QIHALVIKSSFAPVV--PVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 83   NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA---ETRNLRIGKAVHCHFIRCFSN 139
            NNL  EAI  +  + +       D +T +SVL+AC+   E     +G  VH + I+C   
Sbjct: 973  NNLEMEAICTFRDLLRDG--LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030

Query: 140  PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
               FV  +L+++YS      +AE +        + KYD            ++ +WN I+ 
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLL-------HGKYDF-----------DLASWNAIMF 1072

Query: 200  WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
             Y+K+ +  +A+  F +M  MGI    I+      A   L + K    +    +KLG  +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG--F 1130

Query: 260  VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             NDL+V+S  + MY + G    A ++F      +   W TMI GY++N     A+ ++  
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY-H 1189

Query: 320  VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------- 366
            ++ +  +  D+ TF + + A S L  L+ G+Q+HA ++K      +FV   ++       
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG 1249

Query: 367  -------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                   V   +  R VV WN M+    Q+G  DE L L   MQ  G   D VT   +LS
Sbjct: 1250 SVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLS 1309

Query: 420  AASNLR-NQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
            A S+     +  K   A    +GI  E +E Y  L+D   ++G I+ A  +
Sbjct: 1310 ACSHSGLFSEAYKYFDAMFKTYGITPE-IEHYSCLVDALGRAGRIQEAENV 1359


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 231/760 (30%), Positives = 380/760 (50%), Gaps = 49/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +       W  +I G   N    EAI L+  M       +   Y +SSVL AC
Sbjct: 224 ARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPT--PYAFSSVLSAC 281

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +  +L IG+ +H   ++   +   +V N+L+++Y    S + AE               
Sbjct: 282 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAE--------------- 326

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F  M +R+ V +NT+++   +     +A+  F+ M   G+ P + +  ++  A S
Sbjct: 327 ---HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACS 383

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S G   S   ++    KLG  + ++  +  + + +YA+    + A   F      N  +W
Sbjct: 384 SDGTLFSGQQLHAYTTKLG--FASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLW 441

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+  Y   +    +  +F Q ++++EIV +  T+ S L    +L +L+LG+Q+H+ II
Sbjct: 442 NVMLVAYGLLDDLRNSFRIFRQ-MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 500

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K    L   V + +I+                    +DVVSW TMI+ + Q   DD+ L 
Sbjct: 501 KTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 560

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              +M  +G   D V +T  +SA + L+    G+Q HA     G   +   ++ L+ +Y+
Sbjct: 561 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 620

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I+ A   FE+ ++GD     WNA+++G+ Q+G  EEA   F +M    +  N  T 
Sbjct: 621 KCGNIEEAYLAFEQTEAGD--NIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S + A +   N++ GKQ+H    +   D    V  ++I MY+K G I+ A   F ++  
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN V++  MI  Y +HG    AL  F  M    + P+ +T V VLSACS+ GLVD+G++ 
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M  EY + P  EHY CV DML R G +  A +F+ E+  E + L +W +LL +C +H
Sbjct: 799 FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDAL-VWRTLLSACVVH 857

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E  A  LLE++  +S    +VLLSN+YA    W+  D  R++M+E+G++KE G 
Sbjct: 858 KNMEIGEFAAHHLLELEPEDSAT--YVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQ 915

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V   ++ F   DQ HP + +I+E  + L       G
Sbjct: 916 SWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIG 955



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 175/665 (26%), Positives = 311/665 (46%), Gaps = 56/665 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +   T   WN +I      +L  +   L+ +M   +   + +  T+S VL+AC
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNEN--VTPNEGTFSGVLEAC 179

Query: 118 -AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
              +    + + +H   I      S  V N L+++YS             +   VD ++ 
Sbjct: 180 RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYS-------------RNGFVDRAR- 225

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VFD +  ++  +W  ++S   K E  VEA+R F  M  +GI P+  +F +V  A 
Sbjct: 226 ----RVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSAC 281

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             +   +  + ++GL++KLG  + +D +V ++ + +Y  LG    A  IF N  +R+   
Sbjct: 282 KKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVT 339

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +NT+I G  Q  +  +A+ELF + ++LD +  D  T  S + A S    L  GQQLHAY 
Sbjct: 340 YNTLINGLSQCGYGEKAMELF-KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYT 398

Query: 357 IK-NFVALPVI----------------VLNAVIE---RDVVSWNTMISAFVQNGLDDE-- 394
            K  F +   I                 LN  +E    +VV WN M+ A+   GL D+  
Sbjct: 399 TKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY---GLLDDLR 455

Query: 395 -GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
               +  +MQ +  + +  T  ++L     L + ++G+Q H+ +++        + S LI
Sbjct: 456 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLI 515

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G + TA  I  +     +D  +W  MIAGYTQ    ++A   FRQML+  +  +
Sbjct: 516 DMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 573

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            V + + + AC  +  ++ G+Q+H  +       ++    +L+ +YSK G I  A   F 
Sbjct: 574 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFE 633

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +    +++ +  ++ G+ Q G +E AL +F  M   GI+ +  TF + + A S    + +
Sbjct: 634 QTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQ 693

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G Q+  ++ +       TE    +  M  + G + +A +   EL  +  V   W +++ +
Sbjct: 694 GKQVHAVITKT-GYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEV--SWNAMINA 750

Query: 693 CRLHG 697
              HG
Sbjct: 751 YSKHG 755



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 232/482 (48%), Gaps = 27/482 (5%)

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D   KVFD M  R +  WN ++          +    F  M+   + P+  +F  V  A 
Sbjct: 120 DGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEAC 179

Query: 237 SSLGDYKSADVVYGLLVKLGSEYV-NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
              G   + DVV  +  ++  + +     V +  I +Y+  G  D AR++FD    ++  
Sbjct: 180 R--GGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHS 237

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  MI G  +N   VEAI LF  +  L  I+     F S LSA  +++ L++G+QLH  
Sbjct: 238 SWVAMISGLSKNECEVEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGL 296

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
           ++K   +    V NA++                    +RD V++NT+I+   Q G  ++ 
Sbjct: 297 VLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 356

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDM 454
           + L   MQ  G   DS T+ +L+ A S+      G+Q HAY  + G    + +E  L+++
Sbjct: 357 MELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNL 416

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK   I+TA   F + +    +   WN M+  Y     L  +F  FRQM    + PN  
Sbjct: 417 YAKCSDIETALNYFLETEV--ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 474

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  S+L  C  +G++ELG+Q+H   I+     N +V + LIDMY+K G ++ A ++  + 
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
             K+ V++TTMI GY Q+   ++AL+ FR M   GI  D +     +SAC+    + EG 
Sbjct: 535 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 594

Query: 635 QI 636
           QI
Sbjct: 595 QI 596



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 236/525 (44%), Gaps = 35/525 (6%)

Query: 221 GIRPSTISFVNVFPA-LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           GIRP+  +   +    L + G       ++  ++KLG  + N+  ++   +  Y   G  
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG--FDNNACLSEKLLDFYLFKGDL 119

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D A K+FD   ER    WN MI      +   +   LF +++  + +  ++ TF   L A
Sbjct: 120 DGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVN-ENVTPNEGTFSGVLEA 178

Query: 340 VSQLQ-ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
                   D+ +Q+HA II   +    IV N +I+                    +D  S
Sbjct: 179 CRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSS 238

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W  MIS   +N  + E + L  +M   G M      +++LSA   + + ++G+Q H  +L
Sbjct: 239 WVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 298

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G   +  + + L+ +Y   G + +A  IF  ++   RD  T+N +I G +Q G  E+A
Sbjct: 299 KLGFSSDTYVCNALVSLYFHLGSLISAEHIF--SNMSQRDAVTYNTLINGLSQCGYGEKA 356

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F++M    + P+  T+AS++ AC+  G +  G+QLH ++ +     N  +  +L+++
Sbjct: 357 MELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNL 416

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K   I  A N F +   +N V +  M++ YG       +  +FR M+   I P+  T+
Sbjct: 417 YAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 476

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKE 675
            ++L  C   G ++ G QI     Q  K       Y C  + DM  ++GK+  A++ +  
Sbjct: 477 PSILKTCIRLGDLELGEQIH---SQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 533

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
               G  +  W +++     +   + A    +++L+   R+   G
Sbjct: 534 FA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 22/331 (6%)

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIH 443
           +F +NG+D         ++  G   +  T+  LL          D G++ H+ +L+ G  
Sbjct: 49  SFQENGID--------SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFD 100

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
               +   L+D Y   G +  A ++F+  +  +R   TWN MI       L  + F  F 
Sbjct: 101 NNACLSEKLLDFYLFKGDLDGALKVFD--EMPERTIFTWNKMIKELASRSLSGKVFCLFG 158

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNI--ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           +M+  NVTPN  T + VL AC   G++  ++ +Q+H   I   L ++  V   LID+YS+
Sbjct: 159 RMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSR 217

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           +G ++ A  VF  +  K+  ++  MI G  ++     A+ LF  M   GI P    F +V
Sbjct: 218 NGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSV 277

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGE 678
           LSAC     ++ G Q+  L+    K+  S++ Y C A   +   +G ++ A      + +
Sbjct: 278 LSACKKIESLEIGEQLHGLV---LKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQ 334

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
              V   + +L+      G+ E A  + K++
Sbjct: 335 RDAV--TYNTLINGLSQCGYGEKAMELFKRM 363


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 206/573 (35%), Positives = 329/573 (57%), Gaps = 32/573 (5%)

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
           VV+G LVK G  +     V ++ I  YA+    + A  +FD   +R+   WN++IGG   
Sbjct: 5   VVHGYLVKYG--FGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 307 NNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           N    +A+ELFV++ LE  E+  D  T LS + A  Q     +G  +H Y ++  +    
Sbjct: 63  NGLYDKAVELFVRMWLEGQEL--DSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 366 IVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            + NA++                    +++VVSW  MI+++ + G  D+   L  EM  +
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTA 464
           G   D   +T+ L A +   +   GK  H Y +R+GI     + + L++MY K G ++ A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R IF+      +D  +WN +I GY+++ L  EAF  F +ML   + PN VT+A +LPA  
Sbjct: 241 RFIFDHVTK--KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            + ++E G+++H +++R    ++ FV  +L+DMY K G +  A  +F  +  KN +++T 
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTI 357

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI GYG HG    A++LF  MKG GI+PDA +F A+L ACS++GL DEG + F+ M+ E+
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEH 417

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           +I+P  +HY C+ D+L   G + EAYEF++ +  E +   IW SLL  CR+H + +LAE 
Sbjct: 418 RIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDS-SIWVSLLRGCRIHRNVKLAEK 476

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           VA+ + E++  N+  GY+VLL+NIYAE   WE V K++ ++  RGLR+  GCSWI+V G 
Sbjct: 477 VAEMVFELEPENT--GYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGK 534

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
            + F ++++ HPQ  +I E L+ +A  M+  G+
Sbjct: 535 AHIFFAENRNHPQGMRIAEFLDDVARRMQEEGH 567



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 221/465 (47%), Gaps = 49/465 (10%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   +  R   A  +FD + +   + WN+II G   N L  +A+ L+ +M         
Sbjct: 26  ISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQ--EL 83

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+ T  SV+ AC ++    IG  VH + +R        + N+LL+MYS C          
Sbjct: 84  DSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNC---------- 133

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                   S +    K+F  M ++NVV+W  +++ Y +   + +    F+ M   GIRP 
Sbjct: 134 --------SDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +  +   A +     K    V+G  ++ G E V  L VA++ + MY + G  + AR I
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEV--LPVANALMEMYVKCGYMEEARFI 243

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD+  +++T  WNT+IGGY ++N   EA  LF ++L   ++  + VT    L A + L  
Sbjct: 244 FDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL--QLRPNAVTMACILPAAASLSS 301

Query: 346 LDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISA 385
           L+ G+++HAY ++      NFVA  ++              + + +  ++++SW  MI+ 
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHF 444
           +  +G   + + L  +M+  G   D+ + +A+L A S+   +D G +  +A    H I  
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 445 EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           + ++ Y  ++D+   +G +K A +  E     + D + W +++ G
Sbjct: 422 K-LKHYACMVDLLCHTGNLKEAYEFIETMPI-EPDSSIWVSLLRG 464



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 5/110 (4%)

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G  +HG+ ++Y       V  +LI  Y+KS  I  A  VF ++P+++ +++ ++I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSAC-----SYAGLVDEGLQI 636
           +G+ ++A+ LF  M   G E D+ T ++V+ AC     S+ G V  G  +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSV 112


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 208/639 (32%), Positives = 356/639 (55%), Gaps = 41/639 (6%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           +R++V+W+ ++S Y   E+  EA+  F  ML  G  P+   F  VF A S+  +     +
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
           ++G L+K G  + +D+ V  + I M+ +  G  + A K+FD   +RN   W  MI  + Q
Sbjct: 64  IFGFLLKTGY-FESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
                +A++LF+ ++ L   V D  T    +SA +++  L LG+Q H  ++K+ + L V 
Sbjct: 123 LGFSRDAVDLFLDMV-LSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVC 181

Query: 367 VLNAVIE-----------------------RDVVSWNTMISAFVQNG-LDDEGLMLVYEM 402
           V  ++++                        +V+SW  +I+ +VQ+G  D E + L  EM
Sbjct: 182 VGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEM 241

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLI 461
            +     +  T +++L A +NL +  +G+Q +A +++  +     + + LI MY++ G +
Sbjct: 242 VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNM 301

Query: 462 KTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           + AR+    +FEKN        ++N ++  Y ++   EEAF  F ++       N  T A
Sbjct: 302 ENARKAFDVLFEKN------LVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFA 355

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           S+L   + +G I  G+Q+H   ++     N+ +  +LI MYS+ G I  A  VF ++ + 
Sbjct: 356 SLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDG 415

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           N +++T+MI G+ +HG + RAL  F  M   G+ P+ +T++AVLSACS+ GL+ EGL+ F
Sbjct: 416 NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHF 475

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
             M+ E+ I P  EHY CV D+LGR G + EA E V  +  + + L +  + LG+CR+HG
Sbjct: 476 KSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADAL-VLRTFLGACRVHG 534

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           + +L +  A+ +LE D  +  P  ++LLSN++A  G WE V ++RK+M+ER L KE GCS
Sbjct: 535 NMDLGKHAAEMILEQDPHD--PAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCS 592

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           WI+V   V++F   D  HPQ+ +IY+ L++LA++++  G
Sbjct: 593 WIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELG 631



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 292/634 (46%), Gaps = 85/634 (13%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V W+ +I  +  N   +EAI  +  M +   Y   + Y ++ V +AC+   N+ +GK + 
Sbjct: 8   VSWSALISCYANNEKAFEAISAFFDMLECGFYP--NEYCFTGVFRACSNKENISLGKIIF 65

Query: 131 CHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
              ++  +      V  +L++M+      L+             S Y    KVFD M  R
Sbjct: 66  GFLLKTGYFESDVCVGCALIDMFVKGNGDLE-------------SAY----KVFDRMPDR 108

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           NVV W  +++ + +     +AV  F  M+  G  P   +   V  A + +G        +
Sbjct: 109 NVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFH 168

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAEL---GCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            L++K G +   D+ V  S + MYA+    G  D ARK+FD     N   W  +I GYVQ
Sbjct: 169 CLVMKSGLDL--DVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQ 226

Query: 307 NNH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           +     EAIELF+++++  ++  +  TF S L A + L ++ LG+Q++A ++K  +A   
Sbjct: 227 SGGCDREAIELFLEMVQ-GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASIN 285

Query: 366 IVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            V N++I                    E+++VS+NT+++A+ ++   +E   L  E++  
Sbjct: 286 CVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGA 345

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
           G  +++ T  +LLS AS++     G+Q H+ +L+ G      + + LI MY++ G I+ A
Sbjct: 346 GTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAA 405

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
            Q+F  N+ GD +  +W +MI G+ ++G    A   F +MLE  V+PN VT  +VL AC+
Sbjct: 406 FQVF--NEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACS 463

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G I  G +                      M  + G+          +P      Y  
Sbjct: 464 HVGLISEGLK------------------HFKSMKVEHGI----------VPRMEH--YAC 493

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           ++   G+ G  E A+ L  SM     + DA+     L AC   G +D G    +++ ++ 
Sbjct: 494 VVDLLGRSGHLEEAMELVNSMP---FKADALVLRTFLGACRVHGNMDLGKHAAEMILEQD 550

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
              P+   Y  ++++    G+  E  E  K++ E
Sbjct: 551 PHDPAA--YILLSNLHASAGQWEEVAEIRKKMKE 582



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 202/425 (47%), Gaps = 37/425 (8%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    AR++FD +     + W  II G+V       EAI L+ +M +       
Sbjct: 191 AKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ--VKP 248

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++T+SSVLKACA   ++ +G+ V+   ++        V NSL++MYS C +  +A    
Sbjct: 249 NHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENAR--- 305

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N+V++NTIV+ Y K+    EA   F  +   G   +
Sbjct: 306 ---------------KAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVN 350

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    SS+G     + ++  ++K G  + ++L + ++ I MY+  G  + A ++
Sbjct: 351 AFTFASLLSGASSIGAIGKGEQIHSRILKSG--FKSNLHICNALISMYSRCGNIEAAFQV 408

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   + N   W +MI G+ ++     A+E F ++LE   +  ++VT+++ LSA S +  
Sbjct: 409 FNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG-VSPNEVTYIAVLSACSHVGL 467

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +  G       +K+F ++   V + ++ R +  +  ++    ++G  +E + LV  M   
Sbjct: 468 ISEG-------LKHFKSMK--VEHGIVPR-MEHYACVVDLLGRSGHLEEAMELVNSMP-- 515

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
            F  D++ +   L A     N D+GK     +L    H       L +++A +G  +   
Sbjct: 516 -FKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVA 574

Query: 466 QIFEK 470
           +I +K
Sbjct: 575 EIRKK 579



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 115/241 (47%), Gaps = 34/241 (14%)

Query: 26  QIHSLSPPIPKLKTPTIR----SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           Q+++L   + K++  +I     S +S   + G    AR+ FD +     V +NTI+  + 
Sbjct: 271 QVYAL---VVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYA 327

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            +    EA  L+++++ +   T  + +T++S+L   +    +  G+ +H   ++     +
Sbjct: 328 KSLNSEEAFELFNEIEGAG--TGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN 385

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             + N+L++MYS C  +++A                   +VF+ M   NV++W ++++ +
Sbjct: 386 LHICNALISMYSRC-GNIEAAF-----------------QVFNEMGDGNVISWTSMITGF 427

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG-------DYKSADVVYGLLVK 254
            K      A+  F  ML  G+ P+ ++++ V  A S +G        +KS  V +G++ +
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487

Query: 255 L 255
           +
Sbjct: 488 M 488


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 227/744 (30%), Positives = 363/744 (48%), Gaps = 117/744 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK-- 167
           Y+ +L+ C    N   G+A+H   ++     S ++ N+LL+ Y            GL+  
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAG----GLRDA 84

Query: 168 ---YVEVDYSKYDLVC------------------KVFDTMRRRNVVAWNTIVSWYVKTER 206
              + E+  ++ ++                     VF  M  R+ V+W  +V    +  R
Sbjct: 85  RRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGR 144

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           + EA++    M   G  P+  +  NV  + +          V+  +VKLG    + + VA
Sbjct: 145 FGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG--LGSCVPVA 202

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MY + G  + A  +F+    R+   WN M+                         
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMV------------------------- 237

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
                      S  + L  +DL + L       F ++P         R +VSWN MI+ +
Sbjct: 238 -----------SLNTHLGRMDLAESL-------FESMP--------GRSIVSWNAMIAGY 271

Query: 387 VQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            QNGLD + L L   M  +  M  D  T+T++LSA +NL N  +GKQ HAY+LR  + + 
Sbjct: 272 NQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYN 331

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGD----------------------------- 475
             + + LI  YAKSG ++ AR+I +++   D                             
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 476 --RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             RD   W AMI GY QNG  +EA   FR M+     PN  T+A+VL  C  +  ++ GK
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQH 592
           Q+H  +IR LL+++  V  ++I MY++SG   +A  +F ++   K ++T+T+MI+   QH
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  E A+ LF  M   G+EPD IT+V VLSACS+AG V+EG + +D ++ E++I P   H
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+L R G   EA EF++ +  E + +  WGSLL +CR+H ++ELAE+ A+KLL +
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIA-WGSLLSACRVHKNAELAELAAEKLLSI 630

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS  G +  ++N+Y+  G W +  ++ K  +E+ +RKE G SW  +   ++ F + D
Sbjct: 631 DPNNS--GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
             HPQ   +Y M  R+  E++ AG
Sbjct: 689 VVHPQRDAVYAMAARMWEEIKGAG 712



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 137/566 (24%), Positives = 243/566 (42%), Gaps = 84/566 (14%)

Query: 33  PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           P+ +    T  S LS   + GR   AR +F  +     V W  +++G        EAI  
Sbjct: 92  PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
              M  +  +T    +T ++VL +CA T+   +G+ VH   ++        V NS+LNMY
Sbjct: 152 LLDMT-ADGFTPT-QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMY 209

Query: 153 STCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
             C  +  A  V              +  +     + DL   +F++M  R++V+WN +++
Sbjct: 210 GKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIA 269

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            Y +     +A++ F RM+    + P   +  +V  A ++LG+ +    V+  +++  +E
Sbjct: 270 GYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR--TE 327

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLE--------------------------- 291
              +  V ++ I  YA+ G  + AR+I D  +E                           
Sbjct: 328 MAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREM 387

Query: 292 ------RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
                 R+   W  MI GY QN    EAI+LF  ++       +  T  + LS  + L  
Sbjct: 388 FGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP-NSYTLAAVLSVCASLAC 446

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMIS 384
           LD G+Q+H   I++ +     V NA+I                      ++ ++W +MI 
Sbjct: 447 LDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIV 506

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIH 443
           A  Q+G  +E + L  EM + G   D +T   +LSA S+    + GK+ +  +   H I 
Sbjct: 507 ALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIA 566

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            E M  Y  ++D+ A++GL   A++ F +    + D   W ++++    +   E A +A 
Sbjct: 567 PE-MSHYACMVDLLARAGLFSEAQE-FIRRMPVEPDAIAWGSLLSACRVHKNAELAELAA 624

Query: 502 RQMLEHNVTPN----VVTIASVLPAC 523
            ++L  ++ PN       IA+V  AC
Sbjct: 625 EKLL--SIDPNNSGAYSAIANVYSAC 648



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 198/438 (45%), Gaps = 43/438 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LA  LF+S+   + V WN +I G+  N L  +A+ L+S+M   S     D +T +S
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITS 302

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   N+RIGK VH + +R     +  V N+L++ Y+   S  +A  +  + +E D
Sbjct: 303 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 362

Query: 173 YSKYDLVC---------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
            +                     ++F  M  R+VVAW  ++  Y +  R  EA+  FR M
Sbjct: 363 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 422

Query: 218 LRMGIRPSTISFVNVFPALSSLG--DYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFM 272
           +  G  P++ +   V    +SL   DY        +  LL +  S       V+++ I M
Sbjct: 423 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSS-------VSNAIITM 475

Query: 273 YAELGCFDFARKIFDN-CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           YA  G F +AR++FD  C  + T  W +MI    Q+    EA+ LF ++L    +  D +
Sbjct: 476 YARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG-VEPDRI 534

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
           T++  LSA S    ++ G++ +  I       P          ++  +  M+    + GL
Sbjct: 535 TYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP----------EMSHYACMVDLLARAGL 584

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
             E    +  M  +    D++   +LLSA    +N ++ +     LL    +  G  S +
Sbjct: 585 FSEAQEFIRRMPVEP---DAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAI 641

Query: 452 IDMYAKSGLIKTARQIFE 469
            ++Y+  G    A +I++
Sbjct: 642 ANVYSACGRWSDAARIWK 659


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 204/595 (34%), Positives = 330/595 (55%), Gaps = 62/595 (10%)

Query: 261 NDLFVASSAIFMYAELGC---FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           + +F  S  I  ++ LG     D +R +F      N  +WNTMI GY ++++P EAI L+
Sbjct: 39  HQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLY 98

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
           + ++       ++ TF   L++ ++L  L+ G ++H++IIK+     + V NA+I     
Sbjct: 99  MSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSV 158

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RD+VS+NTMI  + +    +  L L  EMQ  G + D  T  AL
Sbjct: 159 FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVAL 218

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK---- 470
            S  S L   +VGKQ HA + ++    +    ++S ++DMYAK GLI  A ++F      
Sbjct: 219 FSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTS 278

Query: 471 --------------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
                                     N   +RD  +W AMI+GY+Q G   EA   F++M
Sbjct: 279 KSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEM 338

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
               + P+ VT+ +VL AC  +G  +LGK+L H +    + +QN  +  +++DMY+K G 
Sbjct: 339 EALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGS 398

Query: 564 INYAANVFAKIPE--KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           I+ A  +F ++ +  K    + +MI G  QHG+ E A+++FR +   G++PD +TFV VL
Sbjct: 399 IDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVL 458

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
            AC ++GL++EG ++F+ M   Y I+P  EHY C+ D+LGR G + EAY+ V+++  E N
Sbjct: 459 CACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEAN 518

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + IW +LL +CR HG+ ++ E+  +KLLEM+ ++     +VLLSNI A+   WE   +V
Sbjct: 519 SV-IWRALLSACRTHGNVKIGEIAGQKLLEMEAQHG--ARYVLLSNILADANQWEEARQV 575

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RK M + G+RK  G S+I++GG ++RF + D+ HPQ  +I  ML+ +AM +++AG
Sbjct: 576 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAG 630



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 135/543 (24%), Positives = 228/543 (41%), Gaps = 120/543 (22%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNY 108
           ++G  H +R LF  I  P   +WNT+I G+  ++ P EAI+LY  M  K  +P    +N+
Sbjct: 57  KDGLDH-SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPP---NNF 112

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+  +L +CA   +L  G  VH H I+       FV N+L+++YS               
Sbjct: 113 TFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSV-------------- 158

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
               +   +L   +FD    R++V++NT++  Y +  +   A+  F  M   GI P   +
Sbjct: 159 ----FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFT 214

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF------- 281
           FV +F   S L +      ++  + K      +++ + S+ + MYA+ G  +        
Sbjct: 215 FVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFST 274

Query: 282 -------------------------ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
                                    ARK+F++  ER+   W  MI GY Q     EA+EL
Sbjct: 275 MGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALEL 334

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---- 372
           F + +E   I  D+VT ++ LSA ++L   DLG++L+   I+N V     +L A +    
Sbjct: 335 FKE-MEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMY 393

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                               +    +N+MI+   Q+GL +  + +  E+   G   D VT
Sbjct: 394 AKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVT 453

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK--N 471
              +L A  +                                  SGLI+  +++FE   N
Sbjct: 454 FVGVLCACGH----------------------------------SGLIEEGKKLFESMFN 479

Query: 472 DSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             G + Q   +  M+    + G LEEA+   ++M       N V   ++L AC   GN++
Sbjct: 480 AYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKM---PFEANSVIWRALLSACRTHGNVK 536

Query: 531 LGK 533
           +G+
Sbjct: 537 IGE 539



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 170/355 (47%), Gaps = 21/355 (5%)

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA----KSGLI 461
           F++++ +   LL +  + +    G Q HA  + +G+H +    S LI  ++    K GL 
Sbjct: 5   FLLENPSSLCLLESCKSFKQ---GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGL- 60

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP-NVVTIASVL 520
             +R +F + D    +   WN MI GY+++    EA V +  M+   + P N  T   +L
Sbjct: 61  DHSRLLFSQIDC--PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLL 118

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            +C  + ++E G ++H   I++  + ++FV  +LI +YS  G +N A  +F +   ++ V
Sbjct: 119 NSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLV 178

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           +Y TMI GY +    E AL LF  M+  GI PD  TFVA+ S CS     + G QI   +
Sbjct: 179 SYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQV 238

Query: 641 QQEYK-IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
            +  + I  +      + DM  + G +  A      +G   +    W S++  C   G++
Sbjct: 239 YKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSA-AAWSSMV--C---GYA 292

Query: 700 ELAEV-VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
              E+ VA+KL        +  +  ++S  Y++ G      ++ KEM   G++ +
Sbjct: 293 RCGEINVARKLFNHMHERDVISWTAMISG-YSQAGQCSEALELFKEMEALGIKPD 346


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 223/753 (29%), Positives = 386/753 (51%), Gaps = 46/753 (6%)

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
           T  T  + N  I     +N   EA+  +   +K+S +      TY S++ AC+ +R+L  
Sbjct: 27  TIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSF-KIRLRTYISLICACSSSRSLAQ 85

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ +H H +         + N +L+MY  C S  DA                   +VFD 
Sbjct: 86  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR------------------EVFDF 127

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  RN+V++ ++++ Y +  +  EA+R +  ML+  + P   +F ++  A +S  D    
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++  ++KL  E  + L   ++ I MY        A ++F     ++   W+++I G+ 
Sbjct: 188 KQLHAQVIKL--ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           Q     EA+    ++L       ++  F S+L A S L   D G Q+H   IK+ +A   
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305

Query: 366 IV-------------LNAV------IER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           I              LN+       IER D  SWN +I+    NG  DE + +  +M+  
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
           GF+ D++++ +LL A +       G Q H+Y+++ G   +  + + L+ MY     +   
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +FE +   + D  +WN ++    Q+    E    F+ ML     P+ +T+ ++L  C 
Sbjct: 426 FNLFE-DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            + +++LG Q+H +S++  L    F+   LIDMY+K G +  A  +F  +  ++ V+++T
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I+GY Q G  E AL LF+ MK  GIEP+ +TFV VL+ACS+ GLV+EGL+++  MQ E+
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P+ EH  CV D+L R G++ EA  F+ E+  E +V+ +W +LL +C+  G+  LA+ 
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV-VWKTLLSACKTQGNVHLAQK 663

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+ +L++D  NS    HVLL +++A  GNWEN   +R  M++  ++K  G SWI++   
Sbjct: 664 AAENILKIDPFNSTA--HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           ++ F ++D  HP+   IY +L  +  +M +  N
Sbjct: 722 IHIFFAEDIFHPERDDIYTVLHNIWSQMLDECN 754



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 270/563 (47%), Gaps = 54/563 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V + ++I G+  N    EAI LY +M +       D + + S++KAC
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP--DQFAFGSIIKAC 178

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A + ++ +GK +H   I+  S+      N+L+ MY                  V +++  
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY------------------VRFNQMS 220

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
              +VF  +  +++++W++I++ + +     EA+   + ML  G+  P+   F +   A 
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280

Query: 237 SSL--GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           SSL   DY S   ++GL +K  SE   +     S   MYA  G  + AR++FD     +T
Sbjct: 281 SSLLRPDYGSQ--IHGLCIK--SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I G   N +  EA+ +F Q +     + D ++  S L A ++   L  G Q+H+
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQ-MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395

Query: 355 YIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDD 393
           YIIK      + V N+++                       D VSWNT+++A +Q+    
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L   M       D +T+  LL     + +  +G Q H Y L+ G+  E  +++ LI
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G +  AR+IF+  D  +RD  +W+ +I GY Q+G  EEA + F++M    + PN
Sbjct: 516 DMYAKCGSLGQARRIFDSMD--NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPN 573

Query: 513 VVTIASVLPACNPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT   VL AC+ +G +E G +L+      + +       + ++D+ +++G +N A    
Sbjct: 574 HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFI 633

Query: 572 AKIP-EKNSVTYTTMILGYGQHG 593
            ++  E + V + T++      G
Sbjct: 634 DEMKLEPDVVVWKTLLSACKTQG 656


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 233/762 (30%), Positives = 372/762 (48%), Gaps = 110/762 (14%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ L++   +++   + D+   + +L+ C    N   G+A+H   ++     S ++ N+L
Sbjct: 5   ALGLHAGAPRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNL 64

Query: 149 LNMYSTCLSS-----------LDAEMVGLKYVEVDYSKYDLVCK---------VFDTMRR 188
           L+ Y+   +             D      + V    S   L  K         VF  M  
Sbjct: 65  LSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPE 124

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+ V+W  +V    +  R+ EA++ F  M+  G+ P+  +  NV  + ++         V
Sbjct: 125 RDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKV 184

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +  +VKLG      + VA+S + MY + G  + AR +F+   ER+   WN M+       
Sbjct: 185 HSFVVKLGLSSC--VPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMV------- 235

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
                         LD                + L  +DL   L       F  +P    
Sbjct: 236 -------------SLD----------------AHLGRMDLALSL-------FENMP---- 255

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQ 427
               +R +VSWN +I+ + QNGL+ + L     M     M  D  T+T++LSA +NL   
Sbjct: 256 ----DRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMV 311

Query: 428 DVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD----------- 475
            +GKQ HAY+LR  + + G + + LI MYAKSG ++ AR + ++    D           
Sbjct: 312 SIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLE 371

Query: 476 --------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
                               RD   W AMI GY QNG  +EA   FR M+     PN  T
Sbjct: 372 GYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYT 431

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +A+VL  C  +  +E GKQ+H  +IR L +Q+  V  S++ MY++SG + +A  VF ++ 
Sbjct: 432 VAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVH 491

Query: 576 -EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
             K +VT+T+MI+   QHG+ E A+ LF  M   G++PD ITFV VLSAC++ G VDEG 
Sbjct: 492 WRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGK 551

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           + F  +Q ++ I P   HY C+ D+L R G   EA EF++++  E + +  WGSLL +CR
Sbjct: 552 RYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIA-WGSLLSACR 610

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +H +++LAE+ A+KLL +D  NS  G +  LSN+Y+  G W +  K+ K  +++ ++KE 
Sbjct: 611 VHKNADLAELAAEKLLSIDPGNS--GAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKET 668

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           G SW  +G  V+ F + D  HPQ   +Y    ++  +++ AG
Sbjct: 669 GFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAG 710



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 147/615 (23%), Positives = 250/615 (40%), Gaps = 110/615 (17%)

Query: 33  PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           P  +    T  S LS   + GR   AR +F  +     V W  +++G        EAI +
Sbjct: 90  PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKM 149

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
           +  M       S   +T ++VL +CA T    +G+ VH   ++   +    V NS+LNMY
Sbjct: 150 FLDMVTDG--LSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMY 207

Query: 153 STCLSSLDAEMVGLKYVEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVS 199
             C  +  A  V  +  E   S +             DL   +F+ M  R +V+WN +++
Sbjct: 208 GKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIA 267

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            Y +     +A+  F RM+    + P   +  +V  A ++LG       V+  +++    
Sbjct: 268 GYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMP 327

Query: 259 YVN-----------------------------DLFVASSAIFM--YAELGCFDFARKIFD 287
           Y+                              DL V S    +  Y +LG    AR++FD
Sbjct: 328 YIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFD 387

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   W  MI GY QN H  EA+ELF +++       +  T  + LS  + L  L+
Sbjct: 388 VMSNRDVVAWTAMIVGYEQNGHNDEAMELF-RLMIRSGPEPNSYTVAAVLSVCASLACLE 446

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAF 386
            G+Q+H   I++       V N+++                      ++ V+W +MI A 
Sbjct: 447 YGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVAL 506

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFE 445
            Q+GL ++ + L  EM + G   D +T   +LSA +++   D GK+    L  +HGI  E
Sbjct: 507 AQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPE 566

Query: 446 GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            M  Y  ++D+ A++GL   A++  +                                 Q
Sbjct: 567 -MSHYACMVDLLARAGLFSEAQEFIQ---------------------------------Q 592

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M    V P+ +   S+L AC    N +L  +L    +  +   N    ++L ++YS  G 
Sbjct: 593 M---PVEPDAIAWGSLLSACRVHKNADLA-ELAAEKLLSIDPGNSGAYSALSNVYSACGR 648

Query: 564 INYAANVFAKIPEKN 578
            N AA ++ +  +K+
Sbjct: 649 WNDAAKIWKRRKDKS 663


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 319/572 (55%), Gaps = 31/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++G ++K G +   D+FV ++ + MY E  C ++AR +FD  +ER+   W+TMI    +N
Sbjct: 116 IHGFVLKKGLD--RDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------- 359
                A+EL ++ +   ++   +V  +S ++  +    + +G+ +HAY+I+N        
Sbjct: 174 KEFDMALEL-IREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGV 232

Query: 360 --------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
                          + L   + N + ++ VVSW  MI+  +++   +EG  L   MQ++
Sbjct: 233 PTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEE 292

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
               + +T+ +L+          +GKQ HAY+LR+G      + + L+DMY K   I+ A
Sbjct: 293 NIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNA 352

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R +F+     +RD   W AM++ Y Q   +++AF  F QM    V P  VTI S+L  C 
Sbjct: 353 RALFDSTQ--NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 410

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             G ++LGK +H +  +  ++ +  + T+L+DMY+K G IN A  +F +   ++   +  
Sbjct: 411 VAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 470

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I G+  HG  E AL +F  M+  G++P+ ITF+ +L ACS+AGLV EG ++F+ M   +
Sbjct: 471 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 530

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            + P  EHY C+ D+LGR G + EA+E +K +  + N + +WG+L+ +CRLH + +L E+
Sbjct: 531 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTI-VWGALVAACRLHKNPQLGEL 589

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A +LLE++  N   GY+VL+SNIYA    W +   VRK M+  G++KE G S I+V G 
Sbjct: 590 AATQLLEIEPENC--GYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGT 647

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V+ F   DQ HPQ  +I EML  +  ++  AG
Sbjct: 648 VHEFLMGDQSHPQIRRINEMLAEMRRKLNEAG 679



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 249/507 (49%), Gaps = 52/507 (10%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           N+   SVLKAC +    ++GK +H   ++   +   FV N+L+ MY  C           
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC--------- 144

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               V+Y++      VFD M  R+VV+W+T++    + + +  A+   R M  M +RPS 
Sbjct: 145 ----VEYARL-----VFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSE 195

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           ++ V++    +   + +    ++  +++  +     +   ++ + MYA+ G    AR++F
Sbjct: 196 VAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLF 255

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +   ++    W  MI G +++N   E  +LF+++ E + I  +++T LS +        L
Sbjct: 256 NGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQE-ENIFPNEITMLSLIVECGFTGAL 314

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
            LG+QLHAYI++N  ++ + +  A+++                    RDV+ W  M+SA+
Sbjct: 315 QLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAY 374

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q    D+   L  +M+  G     VT+ +LLS  +     D+GK  H+Y+ +  +  + 
Sbjct: 375 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 434

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L+DMYAK G I  A ++F +  S  RD   WNA+I G+  +G  EEA   F +M 
Sbjct: 435 ILNTALVDMYAKCGDINAAGRLFIEAIS--RDICMWNAIITGFAMHGYGEEALDIFAEME 492

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVFVGTSLIDMYSK 560
              V PN +T   +L AC+  G +  GK+L     H F    L+ Q    G  ++D+  +
Sbjct: 493 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG---LVPQIEHYG-CMVDLLGR 548

Query: 561 SGVINYAANVFAKIPEK-NSVTYTTMI 586
           +G+++ A  +   +P K N++ +  ++
Sbjct: 549 AGLLDEAHEMIKSMPIKPNTIVWGALV 575



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 200/393 (50%), Gaps = 32/393 (8%)

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV--------------------IER 374
           S L A  Q+    LG+++H +++K  +   V V NA+                    +ER
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DVVSW+TMI +  +N   D  L L+ EM         V + ++++  ++  N  +GK  H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 435 AYLLRHGIHFEGM----ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           AY++R+  + E M     + L+DMYAK G +  ARQ+F  N    +   +W AMIAG  +
Sbjct: 219 AYVIRNS-NNEHMGVPTTTALLDMYAKCGHLGLARQLF--NGLTQKTVVSWTAMIAGCIR 275

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +  LEE    F +M E N+ PN +T+ S++  C   G ++LGKQLH + +R     ++ +
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            T+L+DMY K   I  A  +F     ++ + +T M+  Y Q    ++A +LF  M+  G+
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGV 395

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P  +T V++LS C+ AG +D G  +   + +E +++        + DM  + G +  A 
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDINAAG 454

Query: 671 E-FVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             F++ +  +   + +W +++    +HG+ E A
Sbjct: 455 RLFIEAISRD---ICMWNAIITGFAMHGYGEEA 484



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 212/477 (44%), Gaps = 56/477 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +     V W+T+I     N     A+ L  +M       S       S++   
Sbjct: 148 ARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPS--EVAMVSMVNLF 205

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A+T N+R+GKA+H + IR  +N    V    +LL+MY+ C                    
Sbjct: 206 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC------------------GH 247

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
             L  ++F+ + ++ VV+W  +++  +++ R  E  + F  M    I P+ I+ +++   
Sbjct: 248 LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVE 307

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
               G  +    ++  +++ G  +   L +A++ + MY +      AR +FD+   R+  
Sbjct: 308 CGFTGALQLGKQLHAYILRNG--FSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +W  M+  Y Q N   +A  LF Q +    +    VT +S LS  +    LDLG+ +H+Y
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQ-MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 424

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           I K  V +  I+  A+++                    RD+  WN +I+ F  +G  +E 
Sbjct: 425 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 484

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM----ESY- 450
           L +  EM++QG   + +T   LL A S+      GK+    L    +H  G+    E Y 
Sbjct: 485 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKK----LFEKMVHTFGLVPQIEHYG 540

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++D+  ++GL+  A ++  K+     +   W A++A    +   +   +A  Q+LE
Sbjct: 541 CMVDLLGRAGLLDEAHEMI-KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE 596



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/445 (22%), Positives = 200/445 (44%), Gaps = 43/445 (9%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           +  PT  + L    + G   LARQLF+ +T+ T V W  +I G + +N   E   L+ +M
Sbjct: 230 MGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRM 289

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
           ++ + +   +  T  S++  C  T  L++GK +H + +R   + S  +  +L++MY  C 
Sbjct: 290 QEENIFP--NEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCS 347

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
              +A                    +FD+ + R+V+ W  ++S Y +     +A   F  
Sbjct: 348 DIRNAR------------------ALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQ 389

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   G+RP+ ++ V++    +  G       V+  + K   E   D  + ++ + MYA+ 
Sbjct: 390 MRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV--DCILNTALVDMYAKC 447

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + A ++F   + R+  +WN +I G+  + +  EA+++F + +E   +  +D+TF+  
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE-MERQGVKPNDITFIGL 506

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           L A S    +  G++L   ++  F  +P           +  +  M+    + GL DE  
Sbjct: 507 LHACSHAGLVTEGKKLFEKMVHTFGLVP----------QIEHYGCMVDLLGRAGLLDEAH 556

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            ++  M  +    +++   AL++A    +N  +G+     LL       G    + ++YA
Sbjct: 557 EMIKSMPIKP---NTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYA 613

Query: 457 -------KSGLIKTARQIFEKNDSG 474
                   +G+ KT + +  K + G
Sbjct: 614 AANRWSDAAGVRKTMKTVGMKKEPG 638



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           SVL AC  +   +LGK++HGF ++  LD++VFVG +L+ MY +   + YA  VF K+ E+
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + V+++TMI    ++   + AL L R M    + P  +  V++++        D      
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL-----FADTANMRM 213

Query: 638 DLMQQEYKIQPSTEHYCCVA------DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
                 Y I+ S   +  V       DM  + G +  A +    L ++  V   W +++ 
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV--SWTAMIA 271

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
            C     S   E   K  + M   N  P    +LS I
Sbjct: 272 GCI---RSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 228/745 (30%), Positives = 388/745 (52%), Gaps = 76/745 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           D++     +K+ A  R+ R  +A+H   +R      P+  V N+LL  Y+ C        
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARC------GD 100

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           +         +  DL          R+ V++N+++S      R+  A+   R ML     
Sbjct: 101 LDAALALFAATPPDL----------RDAVSYNSLISALCLFRRWGHALDALRDML-ADHE 149

Query: 224 PSTISFVNVFPALSSLGD--YKSADVVYGLLVKLGS-EYVNDLFVASSAIFMYAELGCFD 280
            S+ + V+V  A S L D  ++     +   +K G  +   + F  ++ + MYA LG  D
Sbjct: 150 VSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVD 209

Query: 281 FARKIF--DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            A+++F        +   WNTMI   VQ     EA+++   ++ L  +  D VTF SAL 
Sbjct: 210 DAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG-VRPDGVTFASALP 268

Query: 339 AVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAVIE----------------RD 375
           A S+L+ L +G+++HA+++K+       FVA  ++ + A  E                R 
Sbjct: 269 ACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQ 328

Query: 376 VVSWNTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT- 433
           +  WN MI  + Q+G +D+E + L   M+ +     S T  A +  A        GK+  
Sbjct: 329 LGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAV 388

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y+++  +     +++ L+DMYA+ G +  A  IF   D   RD  +WN +I G    G
Sbjct: 389 HGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDL--RDIVSWNTLITGCIVQG 446

Query: 493 LLEEAFVAFRQM------------LEHNVT--------PNVVTIASVLPACNPMGNIELG 532
           L+ EAF   R+M            LE + T        PN +T+ ++LP C  +     G
Sbjct: 447 LISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARG 506

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K++HG+++R+ L+ ++ VG++L+DMY+K G +  A  VF ++P +N +T+  +I+ YG H
Sbjct: 507 KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMH 566

Query: 593 GMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           G+ + AL+LF  M   G   P+ +TF+A L+ACS++GLVD GL++F  M+++Y  +P+  
Sbjct: 567 GLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPY 626

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
            + CV D+LGR G++ EAY  +  +    + +  W ++LG+CRLH + +L  + A++L E
Sbjct: 627 LHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFE 686

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           ++   +   ++VLL NIY+  G WEN  +VR  MR+RG+ KE GCSWI++ G ++RF + 
Sbjct: 687 LEPDEA--SHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAG 744

Query: 772 DQEHPQSHKIYEMLERLAMEMRNAG 796
           +  HP+S +++  ++ L   MR  G
Sbjct: 745 ESAHPESAQVHAHMDALWERMRREG 769



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 104/272 (38%), Gaps = 42/272 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS-------- 104
           GR   A  +F  I     V WNT+I G +   L  EA  L  +M+  S   S        
Sbjct: 415 GRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGD 474

Query: 105 --------C--DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
                   C  +N T  ++L  CA       GK +H + +R        V ++L++MY+ 
Sbjct: 475 DTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAK 534

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
           C                      L   VFD + RRNV+ WN ++  Y       EA+  F
Sbjct: 535 C------------------GCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALF 576

Query: 215 RMMLRMG-IRPSTISFVNVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
             M+  G   P+ ++F+    A S  G   +  ++  G+    G E     ++ +  + +
Sbjct: 577 DRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTP--YLHACVVDV 634

Query: 273 YAELGCFDFARKIFDNCL--ERNTEVWNTMIG 302
               G  D A  I  +    E     W+TM+G
Sbjct: 635 LGRAGRLDEAYGIISSMAPGEHQVSAWSTMLG 666


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 214/649 (32%), Positives = 331/649 (51%), Gaps = 90/649 (13%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  M  R+ V+W  +V    +  R+ EA++    M   G  P+  +  NV  + +    
Sbjct: 14  VFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQA 73

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+  +VKLG    + + VA+S + MY + G  + A  +F+    R+   WN M+
Sbjct: 74  GAVGRKVHSFVVKLG--LGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 131

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
                N H                                 L  +DL + L       F 
Sbjct: 132 S---LNTH---------------------------------LGRMDLAESL-------FE 148

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSA 420
           ++P        +R +VSWN MI+ + QNGLD + L L   M  +  M  D  T+T++LSA
Sbjct: 149 SMP--------DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSA 200

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD---- 475
            +NL N  +GKQ HAY+LR  + +   + + LI  YAKSG ++ AR+I +++   D    
Sbjct: 201 CANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVI 260

Query: 476 ---------------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
                                      RD   W AMI GY QNG  +EA   FR M+   
Sbjct: 261 SFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 320

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             PN  T+A+VL  C  +  ++ GKQ+H  +IR LL+Q+  V  ++I MY++SG   +A 
Sbjct: 321 PEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWAR 380

Query: 569 NVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
            +F ++   K ++T+T+MI+   QHG  E A+ LF  M   G+EPD IT+V VLSACS+A
Sbjct: 381 RMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHA 440

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           G V+EG + +D ++ E++I P   HY C+ D+L R G   EA EF++ +  E + +  WG
Sbjct: 441 GFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA-WG 499

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           SLL +CR+H ++ELAE+ A+KLL +D  NS  G +  ++N+Y+  G W +  ++ K  +E
Sbjct: 500 SLLSACRVHKNAELAELAAEKLLSIDPNNS--GAYSAIANVYSACGRWSDAARIWKARKE 557

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + +RKE G SW  +   ++ F + D  HPQ   +Y M  R+  E++ AG
Sbjct: 558 KAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAG 606



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 33/433 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LA  LF+S+   + V WN +I G+  N L  +A+ L+S+M   S     D +T +S
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAP-DEFTITS 196

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA   N+RIGK VH + +R     +  V N+L++ Y+   S  +A  +  + +E D
Sbjct: 197 VLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETD 256

Query: 173 YSKYDLVC---------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
            +                     ++F  M  R+VVAW  ++  Y +  R  EA+  FR M
Sbjct: 257 LNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSM 316

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +  G  P++ +   V    +SL        ++   ++   E  +   V+++ I MYA  G
Sbjct: 317 ITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS--VSNAIITMYARSG 374

Query: 278 CFDFARKIFDN-CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
            F +AR++FD  C  + T  W +MI    Q+    EA+ LF ++L    +  D +T++  
Sbjct: 375 SFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG-VEPDRITYVGV 433

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           LSA S    ++ G++ +  I       P          ++  +  M+    + GL  E  
Sbjct: 434 LSACSHAGFVNEGKRYYDQIKNEHQIAP----------EMSHYACMVDLLARAGLFSEAQ 483

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
             +  M  +    D++   +LLSA    +N ++ +     LL    +  G  S + ++Y+
Sbjct: 484 EFIRRMPVEP---DAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540

Query: 457 KSGLIKTARQIFE 469
             G    A +I++
Sbjct: 541 ACGRWSDAARIWK 553



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 236/548 (43%), Gaps = 84/548 (15%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + GR   AR +F  +     V W  +++G        EAI     M  +  +T    +T 
Sbjct: 4   KSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMT-ADGFTPT-QFTL 61

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV------ 164
           ++VL +CA T+   +G+ VH   ++        V NS+LNMY  C  S  A  V      
Sbjct: 62  TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121

Query: 165 -------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RM 216
                   +  +     + DL   +F++M  R++V+WN +++ Y +     +A++ F RM
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           +    + P   +  +V  A ++LG+ +    V+  +++  +E   +  V ++ I  YA+ 
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILR--TEMAYNSQVTNALISTYAKS 239

Query: 277 GCFDFARKIFDNCLE---------------------------------RNTEVWNTMIGG 303
           G  + AR+I D  +E                                 R+   W  MI G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           Y QN    EAI+LF  ++       +  T  + LS  + L  LD G+Q+H   I++ +  
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEP-NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358

Query: 364 PVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
              V NA+I                      ++ ++W +MI A  Q+G  +E + L  EM
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSG 459
            + G   D +T   +LSA S+    + GK+ +  +   H I  E M  Y  ++D+ A++G
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE-MSHYACMVDLLARAG 477

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN----VVT 515
           L   A++ F +    + D   W ++++    +   E A +A  ++L  ++ PN       
Sbjct: 478 LFSEAQE-FIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL--SIDPNNSGAYSA 534

Query: 516 IASVLPAC 523
           IA+V  AC
Sbjct: 535 IANVYSAC 542


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 204/642 (31%), Positives = 349/642 (54%), Gaps = 34/642 (5%)

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
           YVE  Y K  L   +F+ MR+ +   WN ++  +V    + +AV  +  M   G+R    
Sbjct: 70  YVERGYMKNAL--DLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNF 127

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  V  A   L D    + V+G ++K G +   D+++ +S I MYA++GC + A  +F 
Sbjct: 128 TYPFVIKACGGLYDLAEGERVHGKVIKSGLDL--DIYIGNSLIIMYAKIGCIESAEMVFR 185

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   WN+MI GYV       ++  F + ++   I  D  + +  L A S    L 
Sbjct: 186 EMPVRDLVSWNSMISGYVSVGDGWRSLSCFRE-MQASGIKLDRFSVIGILGACSLEGFLR 244

Query: 348 LGQQLHAYIIKNFVALPVIV--------------------LNAVIERDVVSWNTMISAFV 387
            G+++H  ++++ + L V+V                     + + ++ +V+WN MI  + 
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304

Query: 388 QNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HF 444
            N    E    V +MQ+ G +  D +T+  LL   + L    +GK  H + +R+G   H 
Sbjct: 305 LNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHL 364

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             +E+ L+DMY + G +K A  +F + +  +R+  +WNAMIA YT+NG   +A   F+ +
Sbjct: 365 V-LETALVDMYGECGKLKPAECLFGQMN--ERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               + P+  TIAS+LPA   + ++   +Q+HG+  +  LD N FV  S++ MY K G +
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNL 481

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F ++  K+ +++ T+I+ Y  HG    ++ LF  M+  G EP+  TFV++L +C
Sbjct: 482 LRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSC 541

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S AGLV+EG + F+ M+++Y I P  EHY C+ D++GR G +  A  F++E+        
Sbjct: 542 SVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM-PLAPTAR 600

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IWGSLL + R  G  ELAE+ A+ +L ++  N+  G +VLLSN+YAE G WE+V++++  
Sbjct: 601 IWGSLLTASRNKGDVELAEIAAEHILSLEHDNT--GCYVLLSNMYAEAGRWEDVERIKFH 658

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           M++ GL K VGCS +D+     RF ++D+   + + +Y++L+
Sbjct: 659 MKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLD 700



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/558 (26%), Positives = 268/558 (48%), Gaps = 58/558 (10%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G    A  LF+++ +  T IWN +I GFV N L ++A+  Y +M+        
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGG--VRG 124

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEM 163
           DN+TY  V+KAC    +L  G+ VH   I+   +   ++ NSL+ MY+   C+ S  AEM
Sbjct: 125 DNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIES--AEM 182

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF  M  R++V+WN+++S YV       ++  FR M   GI+
Sbjct: 183 ------------------VFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIK 224

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
               S + +  A S  G  ++   ++  +++  S    D+ V +S + MYA+ G  D+A 
Sbjct: 225 LDRFSVIGILGACSLEGFLRNGKEIHCQMMR--SRLELDVMVQTSLVDMYAKCGRMDYAE 282

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++FD   +++   WN MIGGY  N    E+     ++ E  ++  D +T ++ L   +QL
Sbjct: 283 RLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQL 342

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTM 382
           + + LG+ +H + I+N   LP +VL   +                     ER+++SWN M
Sbjct: 343 EAILLGKSVHGFAIRNGF-LPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAM 401

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+++ +NG + + + L  ++  +    D+ T+ ++L A + L +    +Q H Y+ +  +
Sbjct: 402 IASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKL 461

Query: 443 HFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                 S  ++ MY K G +  AR+IF++     +D  +WN +I  Y  +G    +   F
Sbjct: 462 DSNTFVSNSIVFMYGKCGNLLRAREIFDRMTF--KDVISWNTVIMAYAIHGFGRISIELF 519

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----LIDM 557
            +M E    PN  T  S+L +C+  G +  G +      R   D N+  G      ++D+
Sbjct: 520 SEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKR---DYNINPGIEHYGCILDL 576

Query: 558 YSKSGVINYAANVFAKIP 575
             ++G +++A N   ++P
Sbjct: 577 IGRTGNLDHAKNFIEEMP 594



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 239/461 (51%), Gaps = 34/461 (7%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           + A+  Y E G    A  +F+N  + +T +WN MI G+V N    +A++ F   +E   +
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVD-FYHRMEFGGV 122

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             D+ T+   + A   L +L  G+++H  +IK+ + L + + N++I              
Sbjct: 123 RGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEM 182

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS---N 423
                  RD+VSWN+MIS +V  G     L    EMQ  G  +D  +V  +L A S    
Sbjct: 183 VFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGF 242

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           LRN   GK+ H  ++R  +  + M ++ L+DMYAK G +  A ++F++    D+    WN
Sbjct: 243 LRN---GKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQ--ITDKSIVAWN 297

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           AMI GY+ N    E+F   R+M E   + P+ +T+ ++LP C  +  I LGK +HGF+IR
Sbjct: 298 AMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIR 357

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                ++ + T+L+DMY + G +  A  +F ++ E+N +++  MI  Y ++G + +A++L
Sbjct: 358 NGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTL 417

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F+ +    ++PDA T  ++L A +    + E  QI   + +  K+  +T     +  M G
Sbjct: 418 FQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTK-LKLDSNTFVSNSIVFMYG 476

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           + G ++ A E    +  + +V+  W +++ +  +HG   ++
Sbjct: 477 KCGNLLRAREIFDRMTFK-DVIS-WNTVIMAYAIHGFGRIS 515



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 184/376 (48%), Gaps = 11/376 (2%)

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           S + +   + L + L +Y+ + ++   + +   + + D   WN MI  FV NGL  + + 
Sbjct: 53  SFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVD 112

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
             + M+  G   D+ T   ++ A   L +   G++ H  +++ G+  +  + + LI MYA
Sbjct: 113 FYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYA 172

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I++A  +F +     RD  +WN+MI+GY   G    +   FR+M    +  +  ++
Sbjct: 173 KIGCIESAEMVFREMPV--RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSV 230

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             +L AC+  G +  GK++H   +R  L+ +V V TSL+DMY+K G ++YA  +F +I +
Sbjct: 231 IGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITD 290

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMK-GCGIEPDAITFVAVLSACSY--AGLVDEG 633
           K+ V +  MI GY  +  S  + +  R M+ G  + PD IT + +L  C+   A L+ + 
Sbjct: 291 KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKS 350

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  F +        P       + DM G  GK+  A     ++ E    L  W +++ S 
Sbjct: 351 VHGFAIRN---GFLPHLVLETALVDMYGECGKLKPAECLFGQMNERN--LISWNAMIASY 405

Query: 694 RLHGHSELAEVVAKKL 709
             +G +  A  + + L
Sbjct: 406 TKNGENRKAMTLFQDL 421


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 204/605 (33%), Positives = 343/605 (56%), Gaps = 43/605 (7%)

Query: 233 FPALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           FP L    D      A +++G +VK G  +  DLFV +  + +Y++ G  + A K+FDN 
Sbjct: 68  FPLLQECIDRNLATEARMIHGHIVKTG--FHEDLFVMTFLVNVYSKCGVMESAHKVFDNL 125

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             RN   W T++ GYVQN+HP+ A++LF+++LE       + T    L+A S LQ ++ G
Sbjct: 126 PRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYP-SNYTLGIVLNACSSLQSIEFG 184

Query: 350 QQLHAYIIKNFVALPVIVLNA--------------------VIERDVVSWNTMISAFVQN 389
           +Q+HAY+IK  +     + N+                    + E+DV+SW ++IS+   N
Sbjct: 185 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN 244

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           G     L    +M   G   +  T+T++LSA   +   D+G Q H+  ++ G     + +
Sbjct: 245 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 304

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE-----------A 497
           + ++ +Y K G +  A+++FE  ++   +  TWNAMIAG+ +   L E           A
Sbjct: 305 NSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 362

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F+++    + P++ T +SVL  C+ +  +E G+Q+HG  I+  +  +V VGT+L+ M
Sbjct: 363 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 422

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I+ A+  F ++P +  +++T+MI G+ +HG+S++AL LF  M+  GI+P+ +TF
Sbjct: 423 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 482

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V VLSACS+AGL DE L  F+LMQ++Y I+P  +H+ C+ DM  R+G+V EA++ V ++ 
Sbjct: 483 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 542

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E N   IW  L+  CR HG S+L    A++LL++  ++     +V L N++   G W++
Sbjct: 543 FEPNE-TIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVET--YVSLLNMHISAGRWKD 599

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           V KVRK M+E  + K    SWI +   V  F   D+ H QS ++Y++LE +  E++  G 
Sbjct: 600 VSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGY 659

Query: 798 KTIQN 802
           + I++
Sbjct: 660 EPIED 664



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 162/637 (25%), Positives = 282/637 (44%), Gaps = 96/637 (15%)

Query: 103 TSCDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           T  ++  Y  +L+ C + RNL    + +H H ++   +   FV   L+N+YS C     A
Sbjct: 60  TRIESSYYFPLLQECID-RNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              KVFD + RRNV AW T+++ YV+    + A++ F  ML  G
Sbjct: 119 H------------------KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAG 160

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
             PS  +   V  A SSL   +    V+  L+K   ++  D  + +S    Y++    +F
Sbjct: 161 AYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDF--DTSIGNSLSSFYSKFRRLEF 218

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K F    E++   W ++I     N     ++  F+ +L  D +  ++ T  S LSA  
Sbjct: 219 AIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS-DGMKPNEYTLTSVLSACC 277

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
            +  LDLG Q+H+  IK      +++ N+++                      ++V+WN 
Sbjct: 278 VMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNA 337

Query: 382 MISAFVQN---GLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           MI+   +      DD          L +  ++ + G   D  T +++LS  SNL   + G
Sbjct: 338 MIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQG 397

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           +Q H  +++ G+  +  + + L+ MY K G I  A + F +  S  R   +W +MI G+ 
Sbjct: 398 EQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS--RTMISWTSMITGFA 455

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE--------LGKQLHGFSIR 541
           ++GL ++A   F  M    + PN VT   VL AC+  G  +        + KQ   ++I+
Sbjct: 456 RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQ---YNIK 512

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALS 600
            ++D        LIDMY + G +  A +V  K+  E N   ++ +I G   HG S+  L 
Sbjct: 513 PVMDH----FACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD--LG 566

Query: 601 LFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE---------------- 643
            + + +   ++P D  T+V++L+    AG   +  ++  LM++E                
Sbjct: 567 FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEK 626

Query: 644 -YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            Y  +P+ + +C   +M   +  V+     VK LG E
Sbjct: 627 VYSFKPNDKSHCQSLEMYKLLETVLNE---VKALGYE 660



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 224/493 (45%), Gaps = 79/493 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD++ R     W T++ G+V N+ P  A+ L+ +M ++  Y S  NYT   VL AC
Sbjct: 118 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPS--NYTLGIVLNAC 175

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  +++  GK VH + I+   +    + NSL + YS                   + + +
Sbjct: 176 SSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYS------------------KFRRLE 217

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F  ++ ++V++W +++S      +   ++  F  ML  G++P+  +  +V  A  
Sbjct: 218 FAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACC 277

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +        ++ L +KLG  Y + + + +S +++Y + G    A+K+F+     N   W
Sbjct: 278 VMLTLDLGAQIHSLSIKLG--YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTW 335

Query: 298 NTMIGGYVQNNHPVE-----------AIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           N MI G+ +     E           A+ +F Q L    +  D  TF S LS  S L  L
Sbjct: 336 NAMIAGHAKMMDLAEDDVAAHKSGSTALAMF-QKLYRSGMKPDLFTFSSVLSVCSNLVAL 394

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
           + G+Q+H  IIK+ V   V+V  A++                     R ++SW +MI+ F
Sbjct: 395 EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 454

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFE 445
            ++GL  + L L  +M+  G   + VT   +LSA S           HA L    + +FE
Sbjct: 455 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS-----------HAGLADEALYYFE 503

Query: 446 GME------------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            M+            + LIDMY + G ++ A  +  K +  + ++  W+ +IAG   +G 
Sbjct: 504 LMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF-EPNETIWSMLIAGCRSHGK 562

Query: 494 LEEAFVAFRQMLE 506
            +  F A  Q+L+
Sbjct: 563 SDLGFYAAEQLLK 575


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 221/742 (29%), Positives = 377/742 (50%), Gaps = 47/742 (6%)

Query: 78  IGFVCNNLPY-EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           I  +C N  Y EA+  +   +K+S +      TY S++ AC+ +R+L  G+ +H H +  
Sbjct: 35  INSLCRNSFYREALEAFDFAQKNSSF-KIRLRTYISLICACSSSRSLAQGRKIHDHILNS 93

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
                  + N +L+MY  C S  DA                   +VFD M  RN+V++ +
Sbjct: 94  NCKYDTILNNHILSMYGKCGSLRDAR------------------EVFDFMPERNLVSYTS 135

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
           +++ Y +  +  EA+  +  ML+  + P   +F ++  A +  GD      ++  ++KL 
Sbjct: 136 VITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKL- 194

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
            E  + L   ++ I MY        A K+F     ++   W+++I G+ Q     EA+  
Sbjct: 195 -ESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSH 253

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------------------ 358
             ++L       ++  F S+L A S L   D G Q+H   IK                  
Sbjct: 254 LKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYA 313

Query: 359 --NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
              F+     V N +   D  SWN +I+    NG  DE + +  EM+  GF+ D++++ +
Sbjct: 314 RCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRS 373

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LL A +       G Q H+++++ G   +  + + L+ MY     +     +FE +    
Sbjct: 374 LLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFE-DFRNK 432

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
            D  +WNA++    Q+    E    F+ ML     P+ +T+ ++L  C  + +++LG Q+
Sbjct: 433 ADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV 492

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H +S +  L    F+   LIDMY+K G +  A  +F  +   + V+++T+I+GY Q G  
Sbjct: 493 HCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFG 552

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           E AL LFR MK  GIEP+ +TFV VL+ACS+ GLV+EGL+++ +MQ E+ I P+ EH  C
Sbjct: 553 EEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSC 612

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           V D+L R G + EA  F+ E+  E +V+ +W +LL +C+  G+ +LA+  A+ +L++D  
Sbjct: 613 VVDLLARAGHLNEAERFIDEMKLEPDVV-VWKTLLSACKTQGNVDLAQKAAENILKIDPF 671

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           NS    HVLL +++A  GNWE+   +R  M++  ++K  G SWIDV   ++ F ++D  H
Sbjct: 672 NSTA--HVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLH 729

Query: 776 PQSHKIYEMLERLAMEMRNAGN 797
           P+   IY +L  +  +M +  N
Sbjct: 730 PERDDIYTVLHNIWSQMLDECN 751



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 163/600 (27%), Positives = 276/600 (46%), Gaps = 87/600 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V + ++I G+  N    EAI LY +M ++      D + + S++KAC
Sbjct: 118 AREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVP--DQFAFGSIIKAC 175

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++ +GK +H   I+  S+      N+L+ MY                  V +++  
Sbjct: 176 ACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMY------------------VRFNQMS 217

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
              KVF  +  +++++W++I++ + +     EA+   + ML  G+  P+   F +   A 
Sbjct: 218 DASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 277

Query: 237 SSL--GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           SSL   DY S   ++GL +KL  E   +     S   MYA  G  D AR++F+     +T
Sbjct: 278 SSLLRPDYGSQ--IHGLCIKL--ELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDT 333

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I G   N +  EA+ +F + +     + D ++  S L A ++   L  G Q+H+
Sbjct: 334 ASWNVIIAGLANNGYADEAVSVFSE-MRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHS 392

Query: 355 YIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDD 393
           +IIK      + V N+++                     + D VSWN +++A +Q+    
Sbjct: 393 FIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPV 452

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L   M       D +T+  LL     + +  +G Q H Y  + G+  E  +++ LI
Sbjct: 453 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLI 512

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G ++ AR+IF+  D+G  D  +W+ +I GY Q+G  EEA + FR+M    + PN
Sbjct: 513 DMYAKCGSLRQARRIFDSMDNG--DVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPN 570

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VT   VL AC+ +G +E G +L+                    M ++ G+         
Sbjct: 571 HVTFVGVLTACSHVGLVEEGLKLYAI------------------MQTEHGI--------- 603

Query: 573 KIPEKNSVTYTTMILGYGQH-GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             P K   +    +L    H   +ER +   +      +EPD + +  +LSAC   G VD
Sbjct: 604 -SPTKEHCSCVVDLLARAGHLNEAERFIDEMK------LEPDVVVWKTLLSACKTQGNVD 656



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 192/432 (44%), Gaps = 48/432 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ I RP T  WN II G   N    EA+ ++S+M+ S      D  +  S+L  C
Sbjct: 321 ARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIP--DAISLRSLL--C 376

Query: 118 AETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A+T+ + +  G  +H   I+C       V NSLL MY+ C                    
Sbjct: 377 AQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFC-------------------- 416

Query: 176 YDLVC--KVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            DL C   +F+  R + + V+WN I++  ++ E+ VE +R F++ML     P  I+  N+
Sbjct: 417 SDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNL 476

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                 +   K    V+    K G   V + F+ +  I MYA+ G    AR+IFD+    
Sbjct: 477 LRGCVEISSLKLGSQVHCYSWKTG--LVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNG 534

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W+T+I GY Q+    EA+ LF + ++   I  + VTF+  L+A S +  ++ G +L
Sbjct: 535 DVVSWSTLIVGYAQSGFGEEALILFRE-MKSSGIEPNHVTFVGVLTACSHVGLVEEGLKL 593

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
           +A +       P         ++  S   ++    + G  +E    + EM+ +    D V
Sbjct: 594 YAIMQTEHGISPT--------KEHCS--CVVDLLARAGHLNEAERFIDEMKLEP---DVV 640

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA---RQIFE 469
               LLSA     N D+ ++    +L+           L  M+A SG  + A   R   +
Sbjct: 641 VWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMK 700

Query: 470 KNDSGDRDQATW 481
           K+D       +W
Sbjct: 701 KHDVKKIPGQSW 712


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 221/705 (31%), Positives = 368/705 (52%), Gaps = 48/705 (6%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+AC  +++L+ GK +H   +        F+  +L+N+Y +C                 
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSC----------------- 51

Query: 173 YSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
              YD    VFD M     +  WN +++ Y K   YVEA+  F  +L    ++P + ++ 
Sbjct: 52  -HLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYP 110

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A   L  Y    +++  LVK G   + D+ V SS + MYA+   F+ A  +F+   
Sbjct: 111 SVLKACGGLYKYVLGKMIHTCLVKTG--LMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP 168

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E++   WNT+I  Y Q+ +  EA+E F  ++       + VT  +A+S+ ++L +L+ G 
Sbjct: 169 EKDVACWNTVISCYYQSGNFKEALEYF-GLMRRFGFEPNSVTITTAISSCARLLDLNRGM 227

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++H  +I +   L   + +A+++                    + VV+WN+MIS +   G
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKG 287

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
                + L   M  +G      T+++L+   S       GK  H Y +R+ I  +  + S
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D+Y K G ++ A  IF+          +WN MI+GY   G L EA   F +M +  V
Sbjct: 348 SLMDLYFKCGKVELAENIFKLIPKSK--VVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ +T  SVL AC+ +  +E G+++H   I   LD N  V  +L+DMY+K G ++ A +
Sbjct: 406 EPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  +P+++ V++T+MI  YG HG +  AL LF  M    ++PD +TF+A+LSAC +AGL
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGL 525

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VDEG   F+ M   Y I P  EHY C+ D+LGR G++ EAYE +++  E  + +E+  +L
Sbjct: 526 VDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTL 585

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
             +CRLH + +L   +A+ L++ D  +S    ++LLSN+YA    W+ V  VR +M+E G
Sbjct: 586 FSACRLHRNIDLGAEIARTLIDKDPDDS--STYILLSNMYASAHKWDEVRVVRSKMKELG 643

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           L+K  GCSWI++   +  F  +D  H     +++ L  L+  M +
Sbjct: 644 LKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 264/543 (48%), Gaps = 49/543 (9%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +FD++  P  + +WN ++ G+  N +  EA+ L+ ++    PY   D+YTY SVLKA
Sbjct: 57  AKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHY-PYLKPDSYTYPSVLKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C       +GK +H   ++        V +SL+ MY+ C                  + +
Sbjct: 116 CGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKC------------------NAF 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +    +F+ M  ++V  WNT++S Y ++  + EA+  F +M R G  P++++      + 
Sbjct: 158 EKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L D      ++  L+  G  ++ D F++S+ + MY + G  + A ++F+   ++    
Sbjct: 218 ARLLDLNRGMEIHEELINSG--FLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVA 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV-SQLQELDLGQQLHAY 355
           WN+MI GY      +  I+LF ++   +E V   +T LS+L  V S+   L  G+ +H Y
Sbjct: 276 WNSMISGYGLKGDSISCIQLFKRM--YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGY 333

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            I+N +   V + +++++                      VVSWN MIS +V  G   E 
Sbjct: 334 TIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEA 393

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDM 454
           L L  EM+K     D++T T++L+A S L   + G++ H  ++   + + E +   L+DM
Sbjct: 394 LGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDM 453

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G +  A  +F+      RD  +W +MI  Y  +G    A   F +ML+ N+ P+ V
Sbjct: 454 YAKCGAVDEAFSVFKC--LPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRV 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           T  ++L AC   G ++ G       +  Y +   V   + LID+  ++G ++ A  +  +
Sbjct: 512 TFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571

Query: 574 IPE 576
            PE
Sbjct: 572 NPE 574



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  LA  +F  I +   V WN +I G+V     +EA+ L+S+M+KS  Y   D  T++S
Sbjct: 357 GKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKS--YVEPDAITFTS 414

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC++   L  G+ +H   I    + +  V  +LL+MY+ C                 
Sbjct: 415 VLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKC----------------- 457

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               D    VF  + +R++V+W ++++ Y    +   A+  F  ML+  ++P  ++F+ +
Sbjct: 458 -GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAI 516

Query: 233 FPALSSLG 240
             A    G
Sbjct: 517 LSACGHAG 524


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 222/712 (31%), Positives = 361/712 (50%), Gaps = 88/712 (12%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTC------------- 155
           Y+++L A A T     G A+HC  +R   +P    + N LL  Y                
Sbjct: 9   YAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDAT 67

Query: 156 ----LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
               L + +A +  L +  +     D +  +F +M +R+ V++N +++ +     +  AV
Sbjct: 68  PHPNLFTYNALLSTLAHARL----LDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAV 123

Query: 212 RQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           R +  +LR G  +RPS I+   +  A S+LGD       +  +++LG  +  + FV S  
Sbjct: 124 RLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLG--FGVNAFVGSPL 181

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           + MYA++G    A+++FD    +N  ++NTMI G ++     EA  LF       E++ D
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLF-------EVMTD 234

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
                                                       RD ++W TM++ F QN
Sbjct: 235 --------------------------------------------RDCITWTTMVTGFTQN 250

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--- 446
           GL+ + L     M+ QG  ID  T  ++L+A   L   + GKQ HAY++R   H++    
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIR--THYDDNVF 308

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S L+DMY+K   IK A   F +     ++  +W A+I GY QNG  EEA   F +M  
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSC--KNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  T+ SV+ +C  + ++E G Q H  ++   L   + V  +L+ +Y K G I  
Sbjct: 367 DGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F ++   + V++T ++ GY Q G ++  + LF  M    ++PD +TF+ VLSACS 
Sbjct: 427 AHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSR 486

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AG V++G   F  MQ+++ I P  +HY C+ D+  R G++ EA EF+K++    + +  W
Sbjct: 487 AGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIG-W 545

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
           G+LL +CRL G  E+ +  A+ LLE+D +N  P  +VLL +++A +GNW  V ++R+ MR
Sbjct: 546 GTLLSACRLRGDMEIGQWAAENLLEIDPQN--PASYVLLCSMHATKGNWNQVAQLRRGMR 603

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +R ++KE GCSWI     V+ F++ DQ HP S  IYE LE L  +M   G K
Sbjct: 604 DRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYK 655



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 224/540 (41%), Gaps = 47/540 (8%)

Query: 10  LPPPPPT--------ATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQL 61
           LP PPPT        A     +  +   +    P     T  + LS +           L
Sbjct: 35  LPHPPPTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSL 94

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F S+ +  TV +N +I GF        A+ LY  + ++         T S+++ A +   
Sbjct: 95  FASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALG 154

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA-----EMVGLKYVEVDYSKY 176
           +  +G+  HC  +R     + FV + L+ MY+      DA     EM G   V  +    
Sbjct: 155 DRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMIT 214

Query: 177 DLV-CK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            L+ CK       +F+ M  R+ + W T+V+ + +     +A+  FR M   GI     +
Sbjct: 215 GLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYT 274

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F ++  A  +L   +    ++  +++  + Y +++FV S+ + MY++      A   F  
Sbjct: 275 FGSILTACGALSALEQGKQIHAYIIR--THYDDNVFVGSALVDMYSKCRSIKPAETAFRR 332

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              +N   W  +I GY QN    EA+ +F + ++ D I  DD T  S +S+ + L  L+ 
Sbjct: 333 MSCKNIISWTALIVGYGQNGCSEEAVRVFSE-MQRDGIDPDDFTLGSVISSCANLASLEE 391

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G Q H   + + +   + V NA++                      D VSW  +++ + Q
Sbjct: 392 GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQ 451

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGI-HFEG 446
            G   E + L  +M  +    D VT   +LSA S     + G    H+    HGI   + 
Sbjct: 452 FGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDD 511

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + +ID+Y++SG +K A + F K      D   W  +++     G +E    A   +LE
Sbjct: 512 HYTCMIDLYSRSGRLKEAEE-FIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLE 570


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 227/706 (32%), Positives = 361/706 (51%), Gaps = 87/706 (12%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV----- 164
           Y  +LK C +T      K +HCH I+ F NP  F+ N+L++ Y+       A  V     
Sbjct: 18  YCELLKHCRDT------KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMP 71

Query: 165 -----GLKYVEVDYSKYDLVC-----KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
                    +   YSK  L C     +VF  M  R++V+WN+++S Y      +++V+ +
Sbjct: 72  QRNLYSWNTLLSSYSK--LACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY 129

Query: 215 RMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
            +ML  G    + I+   +    S  G       V+G +VK G  + + +FV S  + MY
Sbjct: 130 NLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFG--FQSYVFVGSPLVDMY 187

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           ++ G    AR+ FD   E+N  ++NT+I G ++ +   ++ +L           F D+  
Sbjct: 188 SKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQL-----------FYDMQ- 235

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
                                                  E+D +SW  MI+ F QNGLD 
Sbjct: 236 ---------------------------------------EKDSISWTAMIAGFTQNGLDR 256

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESY 450
           E + L  EM+ +   +D  T  ++L+A   +     GKQ HAY++R       F G  S 
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG--SA 314

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY K   IK+A  +F K +   ++  +W AM+ GY QNG  EEA   F  M  + + 
Sbjct: 315 LVDMYCKCKSIKSAETVFRKMNC--KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIE 372

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T+ SV+ +C  + ++E G Q H  ++   L   + V  +L+ +Y K G I  +  +
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F+++   + V++T ++ GY Q G +   L LF SM   G +PD +TF+ VLSACS AGLV
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            +G QIF+ M +E++I P  +HY C+ D+  R G++ EA +F+ ++    + +  W SLL
Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIG-WASLL 551

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            SCR H + E+ +  A+ LL+++  N+    ++LLS+IYA +G WE V  +RK MR++GL
Sbjct: 552 SSCRFHRNMEIGKWAAESLLKLEPHNTAS--YILLSSIYAAKGKWEEVANLRKGMRDKGL 609

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RKE GCSWI     V+ F++ DQ +P S +IY  LE+L  +M   G
Sbjct: 610 RKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEG 655



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 175/402 (43%), Gaps = 36/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +RQLF  +    ++ W  +I GF  N L  EAI L+ +M+  +     D YT+ SVL AC
Sbjct: 227 SRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLEN--LEMDQYTFGSVLTAC 284

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L+ GK VH + IR     + FV ++L++MY  C S   AE               
Sbjct: 285 GGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAE--------------- 329

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +NVV+W  ++  Y +     EAV+ F  M   GI P   +  +V  + +
Sbjct: 330 ---TVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCA 386

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     +     L S  ++ + V+++ + +Y + G  + + ++F      +   W
Sbjct: 387 NLASLEEGAQFH--CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E + LF  +L       D VTF+  LSA S+   +  G Q+   +I
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLA-HGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMI 503

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K    +P+         D   +  MI  F + G  +E    + +M    F  D++   +L
Sbjct: 504 KEHRIIPI--------ED--HYTCMIDLFSRAGRLEEARKFINKMP---FSPDAIGWASL 550

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LS+    RN ++GK     LL+   H       L  +YA  G
Sbjct: 551 LSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKG 592


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 231/740 (31%), Positives = 384/740 (51%), Gaps = 109/740 (14%)

Query: 105 CDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           C N    SV K+     N R   + VHC  I+     S ++ N+L+N+YS    +L A  
Sbjct: 16  CTNLLQKSVNKS-----NGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARK 70

Query: 164 V----------GLKYVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           +              V   Y+K    D  C+ FD + +R+ V+W T++  Y    +Y +A
Sbjct: 71  LFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKA 130

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +R    M+R GI PS  +  NV  ++++    ++   V+  +VKLG     ++ V++S +
Sbjct: 131 IRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLR--GNVSVSNSLL 188

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+ G    A+ +FD  + ++   WN MI              L +QV ++D      
Sbjct: 189 NMYAKCGDPMMAKVVFDRMVVKDISSWNAMIA-------------LHMQVGQMD------ 229

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
                   A++Q +++                          ERD+V+WN+MIS + Q G
Sbjct: 230 -------LAMAQFEQM-------------------------AERDIVTWNSMISGYNQRG 257

Query: 391 LDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME- 448
            D   L +  +M +   +  D  T+ ++LSA +NL    +G+Q H++++  G    G+  
Sbjct: 258 YDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGD-------------------------------RD 477
           + LI MY++ G ++TAR++ E+  + D                               RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              W AMI GY Q+GL  EA   FR M+     PN  T+A++L   + + ++  GKQ+HG
Sbjct: 378 VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHG 437

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
            +++     +V V  +LI MY+K+G I  A+  F  I  E+++V++T+MI+   QHG +E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL LF +M   G+ PD IT+V V SAC++AGLV++G Q FD+M+   KI P+  HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+ GR G + EA EF++++  E +V+  WGSLL +CR++ + +L +V A++LL ++  N
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLLSACRVYKNIDLGKVAAERLLLLEPEN 616

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S  G +  L+N+Y+  G WE   K+RK M++  ++KE G SWI+V   V+ F  +D  HP
Sbjct: 617 S--GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHP 674

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           Q ++IY  ++++  E++  G
Sbjct: 675 QKNEIYITMKKIWDEIKKMG 694



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 156/596 (26%), Positives = 248/596 (41%), Gaps = 114/596 (19%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G    + + FD + +  +V W T+I+G+      ++AI +  +M +     S 
Sbjct: 87  LSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPS- 145

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
             +T ++VL + A TR L  GK VH   ++     +  V NSLLNMY+ C   + A++V 
Sbjct: 146 -QFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVF 204

Query: 166 LKYVEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            + V  D S +             DL    F+ M  R++V WN+++S Y +    + A+ 
Sbjct: 205 DRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALD 264

Query: 213 QFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
            F  MLR   + P   +  +V  A ++L      + ++  +V  G +      V ++ I 
Sbjct: 265 MFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISG--IVLNALIS 322

Query: 272 MYAELGCFDFARK---------------------------------IFDNCLERNTEVWN 298
           MY+  G  + AR+                                 IFD+  +R+   W 
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWT 382

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY Q+    EAI LF  ++  +E   +  T  + LS  S L  L  G+Q+H   +K
Sbjct: 383 AMIVGYEQHGLYGEAINLFRSMVG-EEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVK 441

Query: 359 NFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +     V V NA+I                     ERD VSW +MI A  Q+G  +E L 
Sbjct: 442 SGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L   M  +G   D +T   + SA            THA                      
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSAC-----------THA---------------------- 528

Query: 458 SGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
            GL+   RQ F+     D+   T   +  M+  + + GLL+EA     +M    + P+VV
Sbjct: 529 -GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVV 584

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           T  S+L AC    NI+LGK +    +  L  +N    ++L ++YS  G    AA +
Sbjct: 585 TWGSLLSACRVYKNIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKI 639



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 204/441 (46%), Gaps = 35/441 (7%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G+  LA   F+ +     V WN++I G+        A+ ++S+M + S   S D +T 
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDS-MLSPDRFTL 282

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA----EMVGL 166
           +SVL ACA    L IG+ +H H +    + S  V N+L++MYS C     A    E  G 
Sbjct: 283 ASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342

Query: 167 KYVEVD--------YSKY---DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           K ++++        Y K    +    +FD+++ R+VVAW  ++  Y +   Y EA+  FR
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFR 402

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M+    RP++ +   +    SSL        ++G  VK G  Y   + V+++ I MYA+
Sbjct: 403 SMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY--SVSVSNALITMYAK 460

Query: 276 LGCFDFARKIFD--NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            G    A + FD   C ER+T  W +MI    Q+ H  EA+ELF  +L ++ +  D +T+
Sbjct: 461 AGSITSASRAFDLIRC-ERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRPDHITY 518

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           +   SA +    ++ G+Q    +      +P +            +  M+  F + GL  
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL----------SHYACMVDLFGRAGLLQ 568

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E    + +M  +    D VT  +LLSA    +N D+GK     LL       G  S L +
Sbjct: 569 EAQEFIEKMPIEP---DVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALAN 625

Query: 454 MYAKSGLIKTARQIFEKNDSG 474
           +Y+  G  + A +I +    G
Sbjct: 626 LYSACGKWEEAAKIRKSMKDG 646



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 25/207 (12%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           LK     + L    + G  + A+ +FDS+     V W  +I+G+  + L  EAI L+  M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSM 404

Query: 97  --KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
             ++  P    ++YT +++L   +   +L  GK +H   ++     S  V N+L+ MY+ 
Sbjct: 405 VGEEQRP----NSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQ 213
             S   A                   + FD +R  R+ V+W +++    +     EA+  
Sbjct: 461 AGSITSAS------------------RAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLG 240
           F  ML  G+RP  I++V VF A +  G
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAG 529


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 233/747 (31%), Positives = 368/747 (49%), Gaps = 36/747 (4%)

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSS-VLKACAETRNLRIGKAVHCHFIRCFSNPS 141
           N +    +    Q+++ SP T  D     + ++K   +T   R    V     R   + +
Sbjct: 8   NEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAA 67

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           R VY+ + +  +   +++ +  V    V    S  DL    FD M  R VV W  ++ WY
Sbjct: 68  RKVYDEMPHKNTVSTNTMISGHVKTGDVS---SARDL----FDAMPDRTVVTWTILMGWY 120

Query: 202 VKTERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            +   + EA + FR M R      P  ++F  + P  +      +   V+   VKLG + 
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
              L V++  +  Y E+   D A  +F+   E+++  +NT+I GY ++    E+I LF++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
           + +       D TF   L AV  L +  LGQQLHA  +    +    V N ++       
Sbjct: 241 MRQSGHQP-SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        E D VS+N +IS++ Q    +  L    EMQ  GF   +     +LS
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359

Query: 420 AASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            A+NL +  +G+Q H   LL        + + L+DMYAK  + + A  IF+      R  
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS--LPQRTT 417

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +W A+I+GY Q GL       F +M   N+  +  T A+VL A     ++ LGKQLH F
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            IR    +NVF G+ L+DMY+K G I  A  VF ++P++N+V++  +I  +  +G  E A
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           +  F  M   G++PD+++ + VL+ACS+ G V++G + F  M   Y I P  +HY C+ D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G+  EA + + E+  E + + +W S+L +CR+H +  LAE  A+KL  M+     
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEI-MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
             Y V +SNIYA  G WE V  V+K MRERG++K    SW++V   ++ F+S DQ HP  
Sbjct: 657 AAY-VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715

Query: 779 HKIYEMLERLAMEMRNAGNKTIQNSNV 805
            +I   +  L  E+   G K   +S V
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVV 742



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 294/639 (46%), Gaps = 64/639 (10%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+     +   +P   T +  + +S   + G    AR LFD++   T V W TI++G+  
Sbjct: 63  QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTW-TILMGWYA 121

Query: 83  NNLPY-EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF--SN 139
            N  + EA  L+ QM +SS  T  D+ T++++L  C +         VH   ++    +N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
           P   V N LL  Y                   +  + DL C +F+ +  ++ V +NT+++
Sbjct: 182 PFLTVSNVLLKSY------------------CEVRRLDLACVLFEEIPEKDSVTFNTLIT 223

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            Y K   Y E++  F  M + G +PS  +F  V  A+  L D+     ++ L V  G  +
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG--F 281

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF-- 317
             D  V +  +  Y++       R +FD   E +   +N +I  Y Q +    ++  F  
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA-----------YIIKNFVAL--- 363
           +Q +  D   F    F + LS  + L  L +G+QLH            ++  + V +   
Sbjct: 342 MQCMGFDRRNF---PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398

Query: 364 ------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                   ++  ++ +R  VSW  +IS +VQ GL   GL L  +M+      D  T   +
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           L A+++  +  +GKQ HA+++R G     F G  S L+DMYAK G IK A Q+FE  +  
Sbjct: 459 LKASASFASLLLGKQLHAFIIRSGNLENVFSG--SGLVDMYAKCGSIKDAVQVFE--EMP 514

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           DR+  +WNA+I+ +  NG  E A  AF +M+E  + P+ V+I  VL AC+  G +E G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574

Query: 535 -LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---Y 589
                S  Y +         ++D+  ++G    A  +  ++P E + + +++++     +
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
               ++ERA     SM+      DA  +V++ +  + AG
Sbjct: 635 KNQSLAERAAEKLFSMEKL---RDAAAYVSMSNIYAAAG 670


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 222/686 (32%), Positives = 360/686 (52%), Gaps = 79/686 (11%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK  ++ +++R  K +H H I+   + + F  + L+   +   S            ++ Y
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSG-----------DISY 81

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           +       +F+++   N+  WN+++     +     A+  F  M+  G+ P++ +F  + 
Sbjct: 82  A-----ISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            + + L        ++  ++KLG  +V+D+F+ +S I MYA+ G  + A+ +FD      
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLG--FVSDVFIHTSLINMYAQSGEMNNAQLVFD------ 188

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
                       Q+N                    D ++F + ++  +    +D  +QL 
Sbjct: 189 ------------QSNFR------------------DAISFTALIAGYALWGYMDRARQL- 217

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                 F  +PV        +DVVSWN MI+ + Q G   E L+L  +M+K     +  T
Sbjct: 218 ------FDEMPV--------KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKND 472
           + ++LSA +     D+G    +++   G+     + + LIDMY+K G ++TAR++F+  D
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD--D 321

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             +RD  +WN MI GYT     +EA   FR+ML   V P  +T  S+LP+C  +G I+LG
Sbjct: 322 MLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K +H +  +     +  + TSLID+Y+K G I  A  VF  +  K+  ++  MI G   H
Sbjct: 382 KWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMH 441

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G +++A  LF  M   GIEP+ ITFV +LSAC +AGLVD G Q F  M Q+YKI P ++H
Sbjct: 442 GQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQH 501

Query: 653 YCCVADMLGRVGKVVEAYEFVK--ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           Y C+ D+LGR G   EA   ++  E+  +G    IWGSLLG+CR HG  EL E+VA++L 
Sbjct: 502 YGCMIDLLGRAGLFEEAESLLQNMEVKPDG---AIWGSLLGACRDHGRVELGELVAERLF 558

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  N  PG +VLLSNIYA  G W++V ++R  + +RG++K  GC+ I+V   V+ F  
Sbjct: 559 ELEPDN--PGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLV 616

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D+ HPQS  IY MLE +  +++  G
Sbjct: 617 GDKVHPQSEDIYRMLEEVDEQLKVFG 642



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 41/496 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
            S + + G    A  LF+SI  P   IWN++I G   +  P  A++ + +M  S      
Sbjct: 70  FSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSG--VEP 127

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV- 164
           ++YT+  +LK+CA+  +   GK +H H ++       F++ SL+NMY+      +A++V 
Sbjct: 128 NSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVF 187

Query: 165 ---------GLKYVEVDYSKY---DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                        +   Y+ +   D   ++FD M  ++VV+WN +++ Y +  R  EA+ 
Sbjct: 188 DQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALL 247

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
            F  M +  + P+  + V+V  A +        + +   +   G    ++L + ++ I M
Sbjct: 248 LFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRG--LCSNLKLVNALIDM 305

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G    AR++FD+ LER+   WN MIGGY       EA+ LF ++L    +   ++T
Sbjct: 306 YSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLA-SGVEPTEIT 364

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNF-----------VALPVIVLNAVIERDV----- 376
           FLS L + + L  +DLG+ +HAYI KNF           + L     N V  R V     
Sbjct: 365 FLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424

Query: 377 ----VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
                SWN MI     +G  D+   L  +M   G   + +T   +LSA  +    D+G+Q
Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQ 484

Query: 433 THAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
             + +++        + Y  +ID+  ++GL + A  + + N     D A W +++     
Sbjct: 485 FFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQ-NMEVKPDGAIWGSLLGACRD 543

Query: 491 NGLLEEAFVAFRQMLE 506
           +G +E   +   ++ E
Sbjct: 544 HGRVELGELVAERLFE 559



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 196/419 (46%), Gaps = 55/419 (13%)

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS----------------- 378
           +L  +S+ Q +   +Q+HA+IIK  +   +  L+ +IE   VS                 
Sbjct: 32  SLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 379 -----WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
                WN+MI     +      L+    M   G   +S T   LL + + L +   GKQ 
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD----------------- 475
           HA++L+ G   +  + + LI+MYA+SG +  A+ +F++++  D                 
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 476 ------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
                       +D  +WNAMIAGY Q G  +EA + F  M + NV PN  TI SVL AC
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
                ++LG  +  +     L  N+ +  +LIDMYSK G +  A  +F  + E++ +++ 
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI GY      + AL+LFR M   G+EP  ITF+++L +C++ G +D G  I   + + 
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +    ++     + D+  + G +V A +     G +   L  W +++    +HG ++ A
Sbjct: 392 FNSVSTSLSTSLI-DLYAKCGNIVAARQVFD--GMKIKSLASWNAMICGLAMHGQADKA 447



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 191/425 (44%), Gaps = 51/425 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQLFD +     V WN +I G+       EA+LL+  M+K++     +  T  SVL AC
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN--VPPNESTIVSVLSAC 271

Query: 118 AETRNLRIGKAVHCHF-IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           A++  L +G ++      R   +  + V N+L++MYS C     A               
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLV-NALIDMYSKCGDLQTAR-------------- 316

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++FD M  R+V++WN ++  Y     Y EA+  FR ML  G+ P+ I+F+++ P+ 
Sbjct: 317 ----ELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSC 372

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLF------VASSAIFMYAELGCFDFARKIFDNCL 290
           + LG       ++         Y+N  F      +++S I +YA+ G    AR++FD   
Sbjct: 373 AHLGAIDLGKWIHA--------YINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK 424

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            ++   WN MI G   +    +A ELF + +  D I  +++TF+  LSA      +DLGQ
Sbjct: 425 IKSLASWNAMICGLAMHGQADKAFELFSK-MSSDGIEPNEITFVGILSACKHAGLVDLGQ 483

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           Q  + +++++   P              +  MI    + GL +E   L+  M+ +    D
Sbjct: 484 QFFSSMVQDYKISP----------KSQHYGCMIDLLGRAGLFEEAESLLQNMEVKP---D 530

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK 470
                +LL A  +    ++G+     L        G    L ++YA +G      +I  +
Sbjct: 531 GAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTR 590

Query: 471 -NDSG 474
            ND G
Sbjct: 591 LNDRG 595


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 255/798 (31%), Positives = 403/798 (50%), Gaps = 63/798 (7%)

Query: 13  PPPTATPPPPQLPQIHSL-------SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI 65
           P   A+     L Q+H+        + P+P  K     S+L      G    +  +F + 
Sbjct: 6   PLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQL------GDLQSSTSVFRTF 59

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
             P + +W  ++   V N    EAI LY QM   S     ++YT+ SVL+AC+   +L +
Sbjct: 60  HSPDSFMWGVLLKSHVWNGCYQEAISLYHQML--SQQIQANSYTFPSVLRACSGFGDLGV 117

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ VH   I+   +    V  +LL++Y                 E+ Y   D   KVF  
Sbjct: 118 GQRVHGRIIKSGFDMDPVVNTALLSVYG----------------ELGY--LDSARKVFGE 159

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R++V+W++I+S  V+     E +  FR M+  G  P ++  + V  A   LG  + A
Sbjct: 160 MPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLA 219

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
              +G ++K G E  ND FV SS IFMYA+ G    A  +F+N   R+T  W  MI  Y 
Sbjct: 220 KSAHGYILKRGIE--NDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYN 277

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------ 359
              +  EA+ LFV  ++  E+  + VT    L + + L  L  G+ +H  +IKN      
Sbjct: 278 LGGYLKEALALFVS-MQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANL 336

Query: 360 ----------FVA-----LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                     + A     L   +L+ +  R +  WNT+IS + Q GL  E + L   MQK
Sbjct: 337 DCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQK 396

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           QGFM DS ++ + LSA+ N     +G Q H ++++     E + + LI+MY+K G +  A
Sbjct: 397 QGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMYSKCGYVDLA 456

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             IF++ +   +   TWN+MI+G +QNG   +A   F  M         V   SV+ AC+
Sbjct: 457 YMIFDQMEP--KGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G +E GK +H   I   + + +F+ T+L+DMY+K G +  A  VF  + E++ V++++
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I  YG HG     + LF  M   GI+P+ +T + VLSACS+AG V EG+  F+ M +++
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDF 633

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I+P  EH+ C+ D+L R G + EAYE +K +        IWG+LL  CR+H   ++A+ 
Sbjct: 634 GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGA-SIWGALLNGCRIHQRMDIAKN 692

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           + ++L  + T ++  G++ LLSNIYA  G W    +VR  M+  GL+K    S +++G  
Sbjct: 693 IQRELWNIQTDDT--GHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKK 750

Query: 765 VNRFASKDQEHPQSHKIY 782
             RF + D  +PQ    Y
Sbjct: 751 AYRFGAGDASYPQLKYTY 768


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 193/525 (36%), Positives = 302/525 (57%), Gaps = 26/525 (4%)

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  +N ++   +   HP +A+ LFV++L++  +  D  T   AL + S++  LD+G+ +
Sbjct: 82  STPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGI 141

Query: 353 HAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
            AY +K                      VA   ++ +AV E  VV WN +I+A+++NG  
Sbjct: 142 QAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNW 201

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
            E + +   M + G   D +T+ ++++A   + +  +GK    Y+   G +    + + L
Sbjct: 202 MEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTAL 261

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           IDMYAK G +  AR++F+   S  RD   W+AMI+GYTQ     EA   F +M    V P
Sbjct: 262 IDMYAKCGELGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALALFSEMQLAEVEP 319

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N VT+ SVL AC  +G +E GK +H +  R  L   + +GT+L+D Y+K G I+ A   F
Sbjct: 320 NDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAF 379

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +P KNS T+T +I G   +G    AL LF SM+   IEP  +TF+ VL ACS++ LV+
Sbjct: 380 ESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVE 439

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG + FD M Q+Y I+P  EHY CV D+LGR G + EAY+F++ +  E N + IW +LL 
Sbjct: 440 EGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAV-IWRALLS 498

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           SC +H + E+ E   K+++ ++  +S  G ++LLSNIYA  G W+N   +RKEM++RG+ 
Sbjct: 499 SCAVHKNVEIGEEALKQIVSLNPSHS--GDYILLSNIYASVGQWKNAAMIRKEMKDRGIE 556

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  GCS I++ G V  F ++D +HPQ  +IY+ +E +   ++ AG
Sbjct: 557 KTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAG 601



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 146/575 (25%), Positives = 252/575 (43%), Gaps = 108/575 (18%)

Query: 3   SSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRS---RLSKIC-------QE 52
           +++VP    P P  A P PP  P + +    +P+L    I+S     S  C         
Sbjct: 2   ATAVPTAALPTPAGAGPAPPHAP-LRTDPRYLPQLHAALIKSGELTGSPKCFHSLLEAAA 60

Query: 53  GRPHL---ARQLFDSITRP--TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
             P L   A  LF    RP  +T  +N ++   +    P +A+ L+ +M   +     D 
Sbjct: 61  ASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCP-DQ 119

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +T +  LK+C+    L +G+ +  + ++      RFV +SL++MY++C     A+++   
Sbjct: 120 HTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLL--- 176

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                          FD +    VV WN I++ Y+K   ++E V  F+ ML +G+    I
Sbjct: 177 ---------------FDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEI 221

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA------SSAIFMYAELGCFDF 281
           + V+V  A   +GD K        L K  +EYV++  +       ++ I MYA+ G    
Sbjct: 222 TLVSVVTACGRIGDAK--------LGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGK 273

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD    R+   W+ MI GY Q +   EA+ LF + ++L E+  +DVT +S LSA +
Sbjct: 274 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSE-MQLAEVEPNDVTMVSVLSACA 332

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L+ G+ +H+YI +  ++L +I+  A+++                    ++  +W  
Sbjct: 333 VLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTA 392

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I     NG   E L L   M+K       VT   +L A S           H+ L+  G
Sbjct: 393 LIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACS-----------HSCLVEEG 441

Query: 442 -IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAGYTQNGLLEEAFV 499
             HF+ M                        D G + +A  +  ++    + GL++EA+ 
Sbjct: 442 RRHFDSM----------------------TQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQ 479

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
             R M    + PN V   ++L +C    N+E+G++
Sbjct: 480 FIRTM---PIEPNAVIWRALLSSCAVHKNVEIGEE 511


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 204/605 (33%), Positives = 343/605 (56%), Gaps = 43/605 (7%)

Query: 233 FPALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           FP L    D      A +++G +VK G  +  DLFV +  + +Y++ G  + A K+FDN 
Sbjct: 62  FPLLQECIDRNLATEARMIHGHIVKTG--FHEDLFVMTFLVNVYSKCGVMESAHKVFDNL 119

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             RN   W T++ GYVQN+HP+ A++LF+++LE       + T    L+A S LQ ++ G
Sbjct: 120 PRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYP-SNYTLGIVLNACSSLQSIEFG 178

Query: 350 QQLHAYIIKNFVALPVIVLNA--------------------VIERDVVSWNTMISAFVQN 389
           +Q+HAY+IK  +     + N+                    + E+DV+SW ++IS+   N
Sbjct: 179 KQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDN 238

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           G     L    +M   G   +  T+T++LSA   +   D+G Q H+  ++ G     + +
Sbjct: 239 GQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIK 298

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE-----------A 497
           + ++ +Y K G +  A+++FE  ++   +  TWNAMIAG+ +   L E           A
Sbjct: 299 NSIMYLYLKCGWLIEAQKLFEGMET--LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTA 356

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F+++    + P++ T +SVL  C+ +  +E G+Q+HG  I+  +  +V VGT+L+ M
Sbjct: 357 LAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSM 416

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I+ A+  F ++P +  +++T+MI G+ +HG+S++AL LF  M+  GI+P+ +TF
Sbjct: 417 YNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTF 476

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V VLSACS+AGL DE L  F+LMQ++Y I+P  +H+ C+ DM  R+G+V EA++ V ++ 
Sbjct: 477 VGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN 536

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E N   IW  L+  CR HG S+L    A++LL++  ++     +V L N++   G W++
Sbjct: 537 FEPNE-TIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVET--YVSLLNMHISAGRWKD 593

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           V KVRK M+E  + K    SWI +   V  F   D+ H QS ++Y++LE +  E++  G 
Sbjct: 594 VSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGY 653

Query: 798 KTIQN 802
           + I++
Sbjct: 654 EPIED 658



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 162/637 (25%), Positives = 282/637 (44%), Gaps = 96/637 (15%)

Query: 103 TSCDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           T  ++  Y  +L+ C + RNL    + +H H ++   +   FV   L+N+YS C     A
Sbjct: 54  TRIESSYYFPLLQECID-RNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              KVFD + RRNV AW T+++ YV+    + A++ F  ML  G
Sbjct: 113 H------------------KVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAG 154

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
             PS  +   V  A SSL   +    V+  L+K   ++  D  + +S    Y++    +F
Sbjct: 155 AYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDF--DTSIGNSLSSFYSKFRRLEF 212

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K F    E++   W ++I     N     ++  F+ +L  D +  ++ T  S LSA  
Sbjct: 213 AIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLS-DGMKPNEYTLTSVLSACC 271

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
            +  LDLG Q+H+  IK      +++ N+++                      ++V+WN 
Sbjct: 272 VMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNA 331

Query: 382 MISAFVQN---GLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           MI+   +      DD          L +  ++ + G   D  T +++LS  SNL   + G
Sbjct: 332 MIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQG 391

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           +Q H  +++ G+  +  + + L+ MY K G I  A + F +  S  R   +W +MI G+ 
Sbjct: 392 EQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS--RTMISWTSMITGFA 449

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE--------LGKQLHGFSIR 541
           ++GL ++A   F  M    + PN VT   VL AC+  G  +        + KQ   ++I+
Sbjct: 450 RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQ---YNIK 506

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALS 600
            ++D        LIDMY + G +  A +V  K+  E N   ++ +I G   HG S+  L 
Sbjct: 507 PVMDHF----ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD--LG 560

Query: 601 LFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE---------------- 643
            + + +   ++P D  T+V++L+    AG   +  ++  LM++E                
Sbjct: 561 FYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEK 620

Query: 644 -YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            Y  +P+ + +C   +M   +  V+     VK LG E
Sbjct: 621 VYSFKPNDKSHCQSLEMYKLLETVLNE---VKALGYE 654



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 224/493 (45%), Gaps = 79/493 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD++ R     W T++ G+V N+ P  A+ L+ +M ++  Y S  NYT   VL AC
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPS--NYTLGIVLNAC 169

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  +++  GK VH + I+   +    + NSL + YS                   + + +
Sbjct: 170 SSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYS------------------KFRRLE 211

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F  ++ ++V++W +++S      +   ++  F  ML  G++P+  +  +V  A  
Sbjct: 212 FAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACC 271

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +        ++ L +KLG  Y + + + +S +++Y + G    A+K+F+     N   W
Sbjct: 272 VMLTLDLGAQIHSLSIKLG--YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTW 329

Query: 298 NTMIGGYVQNNHPVE-----------AIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           N MI G+ +     E           A+ +F Q L    +  D  TF S LS  S L  L
Sbjct: 330 NAMIAGHAKMMDLAEDDVAAHKSGSTALAMF-QKLYRSGMKPDLFTFSSVLSVCSNLVAL 388

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
           + G+Q+H  IIK+ V   V+V  A++                     R ++SW +MI+ F
Sbjct: 389 EQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGF 448

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFE 445
            ++GL  + L L  +M+  G   + VT   +LSA S           HA L    + +FE
Sbjct: 449 ARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACS-----------HAGLADEALYYFE 497

Query: 446 GME------------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            M+            + LIDMY + G ++ A  +  K +  + ++  W+ +IAG   +G 
Sbjct: 498 LMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF-EPNETIWSMLIAGCRSHGK 556

Query: 494 LEEAFVAFRQMLE 506
            +  F A  Q+L+
Sbjct: 557 SDLGFYAAEQLLK 569


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/643 (33%), Positives = 348/643 (54%), Gaps = 30/643 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF  M  R+V +WN +V  Y K     EA+  +  M+  G+RP   +F  V  +   + 
Sbjct: 150 RVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 209

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D++    V+  +++ G  +  ++ V ++ + MYA+ G    ARK+FD+    +   WN M
Sbjct: 210 DWRMGREVHAHVLRFG--FAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAM 267

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I G+ +N      +ELF+ +L+ DE+  + +T  S   A   L ++   +++H   +K  
Sbjct: 268 IAGHFENGECNAGLELFLTMLQ-DEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRG 326

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            A  V   N++I+                    RD +SW  MIS + +NG  D+ L +  
Sbjct: 327 FATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYA 386

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
            M+      D +T+ + L+A + L + DVG + H      G + +  + + L++MYAKS 
Sbjct: 387 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSK 446

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A ++F+     ++D  +W++MIAG+  N    EA   FR ML  +V PN VT  + 
Sbjct: 447 RIDKAIEVFKCMP--EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAA 503

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC   G +  GK++H   +R  +    ++  +LID+Y K G   YA   F     K+ 
Sbjct: 504 LAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDV 563

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI G+  HG  E ALS F  M   G  PD +TFVA+L ACS  G+V EG ++F  
Sbjct: 564 VSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHS 623

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  +Y I P+ +HY C+ D+L RVG++ EAY F+ E+    +   +WG+LL  CR+H H 
Sbjct: 624 MTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDA-AVWGALLNGCRIHRHV 682

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL E+ AK +LE++  ++  GYHVLL ++YA+ G W+ + +VRK MRE+GL  + GCSW+
Sbjct: 683 ELGELAAKYVLELEPNDA--GYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWV 740

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           +V G V+ F + D+ HPQ  +I  +LE +   M+ +G   +++
Sbjct: 741 EVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES 783



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 162/552 (29%), Positives = 265/552 (48%), Gaps = 48/552 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS + + G    A ++F  +       WN ++ G+    L  EA+ LY +M  +      
Sbjct: 136 LSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG--VRP 193

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D YT+  VL++C    + R+G+ VH H +R        V N+L+ MY+ C   + A    
Sbjct: 194 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR--- 250

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          KVFD+M   + ++WN +++ + +       +  F  ML+  ++P+
Sbjct: 251 ---------------KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPN 295

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            ++  +V  A   L D   A  ++GL VK G  +  D+   +S I MYA LG    AR +
Sbjct: 296 LMTITSVTVASGLLSDITFAKEMHGLAVKRG--FATDVAFCNSLIQMYASLGMMGQARTV 353

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   W  MI GY +N  P +A+E++  ++E++ +  DD+T  SAL+A + L  
Sbjct: 354 FSRMDTRDAMSWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDITIASALAACACLGS 412

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           LD+G +LH           V+V NA++                    E+DVVSW++MI+ 
Sbjct: 413 LDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAG 472

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  N  + E L     M       +SVT  A L+A +       GK+ HA++LR GI +E
Sbjct: 473 FCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYE 531

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           G + + LID+Y K G    A   F  +  G +D  +WN MIAG+  +G  E A   F QM
Sbjct: 532 GYLPNALIDLYVKCGQTGYAWAQFCAH--GAKDVVSWNIMIAGFVAHGNGETALSFFNQM 589

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           ++    P+ VT  ++L AC+  G +  G +L H  + +Y +  N+     ++D+ S+ G 
Sbjct: 590 VKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQ 649

Query: 564 INYAANVFAKIP 575
           +  A N   ++P
Sbjct: 650 LTEAYNFINEMP 661



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 198/377 (52%), Gaps = 25/377 (6%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           L + ++ + M    G    A ++F    ER+   WN M+GGY +     EA++L+ +++ 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMM- 187

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
              +  D  TF   L +   + +  +G+++HA++++   A  V VLNA++          
Sbjct: 188 WAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVV 247

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                       D +SWN MI+   +NG  + GL L   M +     + +T+T++  A+ 
Sbjct: 248 AARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASG 307

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            L +    K+ H   ++ G   +    + LI MYA  G++  AR +F + D+  RD  +W
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDT--RDAMSW 365

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            AMI+GY +NG  ++A   +  M  +NV+P+ +TIAS L AC  +G++++G +LH  +  
Sbjct: 366 TAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAES 425

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                 V V  +L++MY+KS  I+ A  VF  +PEK+ V++++MI G+  +  +  AL  
Sbjct: 426 KGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYY 485

Query: 602 FRSMKGCGIEPDAITFV 618
           FR M    ++P+++TF+
Sbjct: 486 FRHMLA-DVKPNSVTFI 501



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 45/76 (59%)

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +G +++ M  + G   +A  VFAK+PE++  ++  M+ GYG+ G+ E AL L+  M   G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 610 IEPDAITFVAVLSACS 625
           + PD  TF  VL +C 
Sbjct: 191 VRPDVYTFPCVLRSCG 206


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 243/789 (30%), Positives = 382/789 (48%), Gaps = 153/789 (19%)

Query: 54  RPHLARQLFDSI----------TRPTTVI------WNTIIIGFVCNNLPYEAILLYSQMK 97
           +P L  ++F  I            PT  I      +N  I+ F        A+ L    K
Sbjct: 34  KPSLKTKIFSPIFSSCIPIRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCK 93

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           KS   T     TYSSVL+ CA  ++   GK VH                S++   S  + 
Sbjct: 94  KSELETK----TYSSVLQLCAGLKSFTDGKKVH----------------SIIKSNSVGVD 133

Query: 158 SLDAEMVGLKYVEVDYSKYDLV--CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
               E +GLK V    +  DL    +VFDTM ++NV  WN +VS Y K            
Sbjct: 134 ----EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK------------ 177

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                                  +GD+K +  ++ ++V+ G E                 
Sbjct: 178 -----------------------IGDFKESICLFKIMVEKGIEGKRP------------- 201

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               + A ++FD   +R+   WN+MI GYV N      + ++ Q++ L  I  D  T +S
Sbjct: 202 ----ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIIS 256

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            L   +    L LG+ +H+  IK+     +   N ++                    ER+
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 316

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           VVSW +MI+ + ++G  D  + L+ +M+K+G  +D V +T++L A +   + D GK  H 
Sbjct: 317 VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376

Query: 436 YLLRHGIHFEGMES------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           Y     I    MES       L+DMYAK G ++ A  +F       +D  +WN MI    
Sbjct: 377 Y-----IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV--KDIISWNTMIG--- 426

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
                              + P+  T+A VLPAC  +  +E GK++HG+ +R     +  
Sbjct: 427 ------------------ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V  +L+D+Y K GV+  A  +F  IP K+ V++T MI GYG HG    A++ F  M+  G
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           IEPD ++F+++L ACS++GL+++G + F +M+ ++ I+P  EHY C+ D+L R G + +A
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA 588

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
           YEF++ L    +   IWG+LL  CR +   ELAE VA+++ E++  NS  GY+VLL+NIY
Sbjct: 589 YEFIETLPIAPDA-TIWGALLCGCRNYHDIELAEKVAERVFELEPENS--GYYVLLANIY 645

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS-KDQEHPQSHKIYEMLERL 788
           AE   WE V ++R+++ ++GLRK  GCSWI++ G VN F S  +  HP S  I  +L+++
Sbjct: 646 AEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKM 705

Query: 789 AMEMRNAGN 797
             +M+  G+
Sbjct: 706 RRKMKEEGH 714


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 228/704 (32%), Positives = 371/704 (52%), Gaps = 65/704 (9%)

Query: 122 NLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           +LR+G+A+H   +R    +    V NSLL +YS C +   A                   
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASAR------------------ 104

Query: 181 KVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            VFD MR  R++V+W  + S   +     E++     ML  G+ P+  +   V  A    
Sbjct: 105 NVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPH 164

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
             Y     V   LV     +  D+ V S+ I M A  G    ARK+FD  +E+   VW  
Sbjct: 165 ELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTL 224

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I  YVQ     EA+E+F+  LE D    D  T  S +SA ++L  + LG QLH+  ++ 
Sbjct: 225 LISRYVQGECAEEAVEIFLDFLE-DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRM 283

Query: 360 FVALPVIV-------------------LNAVIER----DVVSWNTMISAFVQNGLDDEGL 396
             A    V                    N V ER    DV+SW  +IS +VQ+G+ +  +
Sbjct: 284 GFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKV 343

Query: 397 MLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHFEGMESYLI 452
           M+++ EM  +    + +T +++L A +N+ + D G+Q HA++++      H  G  + L+
Sbjct: 344 MVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVG--NALV 401

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYA+SG ++ AR++F        +Q    +MI+  T+     +A +  R +   ++  +
Sbjct: 402 SMYAESGCMEEARRVF--------NQLYERSMISCITEG---RDAPLDHR-IGRMDMGIS 449

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             T AS++ A   +G +  G+QLH  +++     + FV  SL+ MYS+ G +  A   F 
Sbjct: 450 SSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFN 509

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           ++ ++N +++T+MI G  +HG +ERALSLF  M   G++P+ +T++AVLSACS+ GLV E
Sbjct: 510 ELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVRE 569

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G + F  MQ+++ + P  EHY C+ D+L R G V EA EF+ E+  + + L +W +LLG+
Sbjct: 570 GKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADAL-VWKTLLGA 628

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR H + E+ E+ AK ++E++ R+  P  +VLLSN+YA+ G W+ V ++R  MR+  L K
Sbjct: 629 CRSHDNIEVGEIAAKNVIELEPRDPAP--YVLLSNLYADAGLWDEVARIRSAMRDNNLNK 686

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           E G SW++V    + F + D  HP++  IY  L+ L  E++  G
Sbjct: 687 ETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEIKGMG 730



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 62/476 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +   T V+W  +I  +V      EA+ ++    +       D YT SS++ AC
Sbjct: 207 ARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDG--FEPDRYTMSSMISAC 264

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E  ++R+G  +H   +R        V   L++MY+   S+++  M        DY+   
Sbjct: 265 TELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK--SNIEQAM--------DYAN-- 312

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
              KVF+ MR+ +V++W  ++S YV++   E  V  +  F  ML   I+P+ I++ ++  
Sbjct: 313 ---KVFERMRKNDVISWTALISGYVQSGVQENKVMVL--FGEMLNESIKPNHITYSSILK 367

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++ D+ S   V+  ++K  S       V ++ + MYAE GC + AR++F+   ER  
Sbjct: 368 ACANISDHDSGRQVHAHVIK--SNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER-- 423

Query: 295 EVWNTMIGGYVQN-NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
               +MI    +  + P++      ++  +D +     TF S +SA + +  L  GQQLH
Sbjct: 424 ----SMISCITEGRDAPLDH-----RIGRMD-MGISSSTFASLISAAASVGMLTKGQQLH 473

Query: 354 AYIIK------NFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDD 393
           A  +K       FV+  ++ +              N + +R+V+SW +MIS   ++G  +
Sbjct: 474 AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY-- 450
             L L ++M   G   + VT  A+LSA S++     GK+    + R HG+    ME Y  
Sbjct: 534 RALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL-IPRMEHYAC 592

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++D+ A+SGL+K A + F        D   W  ++     +  +E   +A + ++E
Sbjct: 593 MVDLLARSGLVKEALE-FINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIE 647



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 42/228 (18%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T++S++ A A    L  G+ +H   ++      RFV NSL++MYS C    DA       
Sbjct: 452 TFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDA------- 504

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                      C+ F+ ++ RNV++W +++S   K      A+  F  M+  G++P+ ++
Sbjct: 505 -----------CRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVT 553

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD--FARK-- 284
           ++ V  A S +G           LV+ G EY   +      I       C     AR   
Sbjct: 554 YIAVLSACSHVG-----------LVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGL 602

Query: 285 -------IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ-VLELD 324
                  I +  L+ +  VW T++G   +++  +E  E+  + V+EL+
Sbjct: 603 VKEALEFINEMPLKADALVWKTLLGA-CRSHDNIEVGEIAAKNVIELE 649


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 215/640 (33%), Positives = 339/640 (52%), Gaps = 30/640 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FD M  R  V W  ++  Y +  ++ EA   F  M R G  P  ++FV +    +   
Sbjct: 104 KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHE 163

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  V   ++KLG  Y + L V ++ +  Y +    D A ++F    E ++  +N M
Sbjct: 164 MGNQITQVQTQIIKLG--YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAM 221

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++    +A+ LFV+ ++   +   + TF + L A   L ++ LGQQ+H+++IK  
Sbjct: 222 ITGYSKDGLDEKAVNLFVE-MQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V NA++                    E+D VS+N +IS +  +G       L  
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSG 459
           E+Q   F         +LS ASN  + ++G+Q HA  +      E +  + L+DMYAK G
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 400

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
             + A  IF   +   R    W AMI+ Y Q G  EE    F +M + +V  +  T AS+
Sbjct: 401 KFEEAEMIF--TNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L A   + ++ LGKQLH F I+     NVF G++L+D+Y+K G I  A   F ++P++N 
Sbjct: 459 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 518

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI  Y Q+G +E  L  F+ M   G++PD+++F+ VLSACS++GLV+EGL  F+ 
Sbjct: 519 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNS 578

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M Q YK+ P  EHY  V DML R G+  EA + + E+  + + + +W S+L +CR+H + 
Sbjct: 579 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEI-MWSSVLNACRIHKNQ 637

Query: 700 ELAEVVAKKLLEMDT-RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           ELA   A +L  M+  R++ P  +V +SNIYA  G WENV KV K MR+RG++K    SW
Sbjct: 638 ELARRAADQLFNMEELRDAAP--YVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSW 695

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +++    + F++ D+ HPQ  +I + ++ L   M   G K
Sbjct: 696 VEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYK 735



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 285/628 (45%), Gaps = 89/628 (14%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           +L Q   L   +P   T +    +S   + G    AR+LFD +   T V W  +I G+  
Sbjct: 67  ELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQ 126

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
            N   EA  L+ QM++    T  D  T+ ++L  C           V    I+   +   
Sbjct: 127 LNQFKEAFELFVQMQRCG--TEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL 184

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V N+L++ Y  C S                ++ DL C++F  M   + V++N +++ Y 
Sbjct: 185 IVGNTLVDSY--CKS----------------NRLDLACQLFKEMPEIDSVSYNAMITGYS 226

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           K     +AV  F  M   G++P+  +F  V  A   L D      ++  ++K  + +V +
Sbjct: 227 KDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIK--TNFVWN 284

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +FV+++ +  Y++      ARK+FD   E++   +N +I GY  +     A +LF    E
Sbjct: 285 VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF---RE 341

Query: 323 LDEIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           L    FD     F + LS  S   + ++G+Q+HA  I       ++V N++++       
Sbjct: 342 LQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGK 401

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        R  V W  MISA+VQ G  +EGL L  +M++   + D  T  +LL A
Sbjct: 402 FEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRA 461

Query: 421 ASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           ++++ +  +GKQ H+++++ G     F G  S L+D+YAK G IK A Q F+  +  DR+
Sbjct: 462 SASIASLSLGKQLHSFIIKSGFMSNVFSG--SALLDVYAKCGSIKDAVQTFQ--EMPDRN 517

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK-QLH 536
             +WNAMI+ Y QNG  E    +F++M+   + P+ V+   VL AC+  G +E G    +
Sbjct: 518 IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFN 577

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
             +  Y LD       S++DM  +SG  N A  + A++P                     
Sbjct: 578 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMP--------------------- 616

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSAC 624
                        I+PD I + +VL+AC
Sbjct: 617 -------------IDPDEIMWSSVLNAC 631



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 230/492 (46%), Gaps = 39/492 (7%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVF 328
           Y + G    ARK+FD  +ER    W  +IGGY Q N   EA ELFVQ+     E D + F
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTF 152

Query: 329 DDVTFLSALSA------VSQLQ----------ELDLGQQL-HAYIIKNFVALPVIVLNAV 371
             VT LS  +       ++Q+Q           L +G  L  +Y   N + L   +   +
Sbjct: 153 --VTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 210

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            E D VS+N MI+ + ++GLD++ + L  EMQ  G      T  A+L A   L +  +G+
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQ 270

Query: 432 QTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H+++++    +    S  L+D Y+K   +  AR++F+  +  ++D  ++N +I+GY  
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD--EMPEQDGVSYNVIISGYAW 328

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +G  + AF  FR++            A++L   +   + E+G+Q+H  +I    D  + V
Sbjct: 329 DGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 388

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           G SL+DMY+K G    A  +F  +  +++V +T MI  Y Q G  E  L LF  M+   +
Sbjct: 389 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 448

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
             D  TF ++L A +    +  G Q+   + +      +      + D+  + G + +A 
Sbjct: 449 IADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAV 507

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +  +E+ +  N++  W +++ +   +G    AE   K   EM      P     L  + A
Sbjct: 508 QTFQEMPDR-NIVS-WNAMISAYAQNGE---AEATLKSFKEMVLSGLQPDSVSFLGVLSA 562

Query: 731 -------EEGNW 735
                  EEG W
Sbjct: 563 CSHSGLVEEGLW 574



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 35/214 (16%)

Query: 449 SYLIDMYAKSGLIKTARQIFEKN----------------DSG-------------DRDQA 479
           ++ +  + K+G +  ARQ+FEK                  SG             +R   
Sbjct: 56  NFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAV 115

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN--PMGNIELGKQLHG 537
           TW  +I GY+Q    +EAF  F QM      P+ VT  ++L  CN   MGN     Q   
Sbjct: 116 TWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQI 175

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
             + Y  D  + VG +L+D Y KS  ++ A  +F ++PE +SV+Y  MI GY + G+ E+
Sbjct: 176 IKLGY--DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEK 233

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           A++LF  M+  G++P   TF AVL  C+  GL D
Sbjct: 234 AVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 228/767 (29%), Positives = 382/767 (49%), Gaps = 49/767 (6%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G   LAR++FD +       W  +I G   N    EAI L+  M       +   Y +
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT--PYAF 291

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC +  +L IG+ +H   ++   +   +V N+L+++Y    + + AE        
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE-------- 343

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      +F  M +R+ V +NT+++   +     +A+  F+ M   G+ P + +  
Sbjct: 344 ----------HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  A S+ G       ++    KLG  + ++  +  + + +YA+    + A   F    
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLG--FASNNKIEGALLNLYAKCADIETALDYFLETE 451

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             N  +WN M+  Y   +    +  +F Q ++++EIV +  T+ S L    +L +L+LG+
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQ-MQIEEIVPNQYTYPSILKTCIRLGDLELGE 510

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H+ IIK    L   V + +I+                    +DVVSW TMI+ + Q  
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
            DD+ L    +M  +G   D V +T  +SA + L+    G+Q HA     G   +   ++
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ +Y++ G I+ +   FE+ ++GD     WNA+++G+ Q+G  EEA   F +M    +
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGD--NIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             N  T  S + A +   N++ GKQ+H    +   D    V  +LI MY+K G I+ A  
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  KN V++  +I  Y +HG    AL  F  M    + P+ +T V VLSACS+ GL
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VD+G+  F+ M  EY + P  EHY CV DML R G +  A EF++E+  + + L +W +L
Sbjct: 809 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL-VWRTL 867

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L +C +H + E+ E  A  LLE++  +S    +VLLSN+YA    W+  D  R++M+E+G
Sbjct: 868 LSACVVHKNMEIGEFAAHHLLELEPEDSAT--YVLLSNLYAVSKKWDARDLTRQKMKEKG 925

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++KE G SWI+V   ++ F   DQ HP + +I+E  + L       G
Sbjct: 926 VKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 972



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 158/549 (28%), Positives = 255/549 (46%), Gaps = 40/549 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD M  R +  WN ++          E    F  M+   + P+  +F  V  A    G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR--G 198

Query: 241 DYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              + DVV  +  ++  + + D   V +  I +Y+  G  D AR++FD    ++   W  
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI G  +N    EAI LF  +  L  I+     F S LSA  +++ L++G+QLH  ++K 
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
             +    V NA++                    +RD V++NT+I+   Q G  ++ + L 
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKS 458
             M   G   DS T+ +L+ A S       G+Q HAY  + G      +E  L+++YAK 
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             I+TA   F + +    +   WN M+  Y     L  +F  FRQM    + PN  T  S
Sbjct: 438 ADIETALDYFLETEV--ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L  C  +G++ELG+Q+H   I+     N +V + LIDMY+K G ++ A ++  +   K+
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI-- 636
            V++TTMI GY Q+   ++AL+ FR M   GI  D +     +SAC+    + EG QI  
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615

Query: 637 ---FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
                    +   Q +      +  +  R GK+ E+Y    E  E G+ +  W +L+   
Sbjct: 616 QACVSGFSSDLPFQNA------LVTLYSRCGKIEESY-LAFEQTEAGDNIA-WNALVSGF 667

Query: 694 RLHGHSELA 702
           +  G++E A
Sbjct: 668 QQSGNNEEA 676



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 175/671 (26%), Positives = 309/671 (46%), Gaps = 56/671 (8%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G  + A ++FD +   T   WN +I      NL  E   L+ +M   S   + +  T+S
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM--VSENVTPNEGTFS 190

Query: 112 SVLKAC-AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            VL+AC   +    + + +H   +      S  V N L+++YS                 
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------- 234

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                 DL  +VFD +R ++  +W  ++S   K E   EA+R F  M  +GI P+  +F 
Sbjct: 235 --NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A   +   +  + ++GL++KLG  + +D +V ++ + +Y  LG    A  IF N  
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +R+   +NT+I G  Q  +  +A+ELF + + LD +  D  T  S + A S    L  GQ
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELF-KRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409

Query: 351 QLHAYIIKNFVA---------LPVIVLNAVIE-----------RDVVSWNTMISAFVQNG 390
           QLHAY  K   A         L +    A IE            +VV WN M+ A+   G
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---G 466

Query: 391 LDDE---GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           L D+      +  +MQ +  + +  T  ++L     L + ++G+Q H+ +++        
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S LIDMYAK G + TA  I  +     +D  +W  MIAGYTQ    ++A   FRQML+
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             +  + V + + + AC  +  ++ G+Q+H  +       ++    +L+ +YS+ G I  
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +   F +    +++ +  ++ G+ Q G +E AL +F  M   GI+ +  TF + + A S 
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
              + +G Q+  ++ +       TE    +  M  + G + +A +   E+  +  V   W
Sbjct: 705 TANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV--SW 761

Query: 687 GSLLGSCRLHG 697
            +++ +   HG
Sbjct: 762 NAIINAYSKHG 772



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 236/532 (44%), Gaps = 49/532 (9%)

Query: 221 GIRPSTISFVNVFPA-LSSLGDYKSADVVYGLLVKLG-------SEYVNDLFVASSAIFM 272
           GIRP+  +   +    L + G       ++  ++KLG       SE + D ++    ++ 
Sbjct: 79  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY- 137

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
               G F    K+FD   ER    WN MI      N   E   LFV+++  + +  ++ T
Sbjct: 138 ----GAF----KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGT 188

Query: 333 FLSALSAVSQLQ-ELDLGQQLHAYII--------------------KNFVALPVIVLNAV 371
           F   L A        D+ +Q+HA I+                      FV L   V + +
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             +D  SW  MIS   +N  + E + L  +M   G M      +++LSA   + + ++G+
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H  +L+ G   +  + + L+ +Y   G + +A  IF  ++   RD  T+N +I G +Q
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF--SNMSQRDAVTYNTLINGLSQ 366

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
            G  E+A   F++M    + P+  T+AS++ AC+  G +  G+QLH ++ +     N  +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +L+++Y+K   I  A + F +   +N V +  M++ YG       +  +FR M+   I
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVE 668
            P+  T+ ++L  C   G ++ G QI     Q  K       Y C  + DM  ++GK+  
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           A++ +      G  +  W +++     +   + A    +++L+   R+   G
Sbjct: 544 AWDILIRFA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 319/586 (54%), Gaps = 58/586 (9%)

Query: 266 ASSAIFMYAELGCF---DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           ++S +F  A L  F   ++ARK+FD   + N+  WNT+I  Y     PV +I  F+ ++ 
Sbjct: 65  SASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVS 124

Query: 323 LDEIVF-DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
            +   + +  TF   + A +++  L LGQ LH   IK+ V   V V N++I         
Sbjct: 125 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDL 184

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      E+DVVSWN+MI+ FVQ G  D+ L L  +M+ +      VT+  +LSA 
Sbjct: 185 DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSAC 244

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD----- 475
           + +R+ + G++  +Y+  + ++    + + ++DMY K G I+ A+++F+  +  D     
Sbjct: 245 AKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 304

Query: 476 ------------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVT 510
                                   +D   WNA+I+ Y QNG   EA + F ++ L+ N+ 
Sbjct: 305 TMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            N +T+ S L AC  +G +ELG+ +H +  +  +  N +V ++LI MYSK G +  A  V
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREV 424

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  + +++   ++ MI G   HG    A+ +F  M+   ++P+ +TF  V  ACS+ GLV
Sbjct: 425 FNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 484

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           DE   +F  M+  Y I P  +HY C+ D+LGR G + +A +F++ +    +   +WG+LL
Sbjct: 485 DEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPST-SVWGALL 543

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+C++H +  LAE+   +LLE++ RN   G HVLLSNIYA+ G W+NV ++RK MR  GL
Sbjct: 544 GACKIHANLSLAEMACTRLLELEPRND--GAHVLLSNIYAKSGKWDNVSELRKHMRVTGL 601

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +KE GCS I++ G ++ F S D  HP S K+Y  L  +  ++++ G
Sbjct: 602 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 647



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 163/706 (23%), Positives = 287/706 (40%), Gaps = 154/706 (21%)

Query: 3   SSSVPLPLPPPPPTATPPPP---------------------QLPQIHSLSPPIPKLKTPT 41
           S++ PL LP  P  + P  P                     QL Q H+          P 
Sbjct: 5   STAQPLSLPRHPNFSNPNQPTTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPY 64

Query: 42  IRSRL---SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
             S+L   + +        AR++FD I +P +  WNT+I  +     P  +I  +  M  
Sbjct: 65  SASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVS 124

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
           S      + YT+  ++KA AE  +L +G+++H   I+       FV NSL++ Y +C   
Sbjct: 125 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSC--- 181

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                             D  CKVF T++ ++VV+WN++++ +V+     +A+  F+ M 
Sbjct: 182 ---------------GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 226

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELG 277
              ++ S ++ V V  A + + D +    V   + +     VN +L +A++ + MY + G
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEE---NRVNVNLTLANAMLDMYTKCG 283

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYV-------------------------------Q 306
             + A+++FD   E++   W TM+ GY                                Q
Sbjct: 284 SIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQ 343

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------F 360
           N  P EA+ +F ++     I  + +T +S LSA +Q+  L+LG+ +H+YI KN      +
Sbjct: 344 NGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFY 403

Query: 361 VALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V   +I              V N+V +RDV  W+ MI     +G   E + + Y+MQ+  
Sbjct: 404 VTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEAN 463

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQ 466
              + VT T +  A S+                                  +GL+  A  
Sbjct: 464 VKPNGVTFTNVFCACSH----------------------------------TGLVDEAES 489

Query: 467 IFEKNDSGDR---DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           +F K +S      +   +  ++    ++G LE+A V F + +   + P+     ++L AC
Sbjct: 490 LFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKA-VKFIEAMP--IPPSTSVWGALLGAC 546

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV--------FAKIP 575
               N+ L  ++    +  L  +N      L ++Y+KSG  +  + +          K P
Sbjct: 547 KIHANLSLA-EMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEP 605

Query: 576 EKNSVTYTTMI----LGYGQHGMSERALS----LFRSMKGCGIEPD 613
             +S+    MI     G   H MSE+       +   +K  G EP+
Sbjct: 606 GCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPE 651


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 203/679 (29%), Positives = 367/679 (54%), Gaps = 36/679 (5%)

Query: 147 SLLNMYSTCLS-SLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYV 202
           S+  ++S CL   L  +   +  + V Y++Y  +C   K+F+    + V  WN ++  Y 
Sbjct: 19  SIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYF 78

Query: 203 KTERYVEAVRQFRMMLRMGI---RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
              ++VE +  F  M    I   RP   +      + S L   +   +++G L K   + 
Sbjct: 79  LEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKK--KKI 136

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            ND+FV S+ I +Y++ G  + A K+F    +++  +W ++I GY QN  P  A+  F +
Sbjct: 137 DNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSR 196

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
           ++ L+++  D VT +SA SA +QL + +LG+ +H ++ +      + + N+++       
Sbjct: 197 MVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTG 256

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         +D++SW++M++ +  NG +   L L  EM  +   ++ VTV + L 
Sbjct: 257 SIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALR 316

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A ++  N + GK  H   + +G   +  + + L+DMY K    K A  +F  N    +D 
Sbjct: 317 ACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLF--NRMPKKDV 374

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +W  + +GY + G+  ++   F  ML +   P+ + +  +L A + +G ++    LH F
Sbjct: 375 VSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAF 434

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
             +   D N F+G SLI++Y+K   I+ A  VF  +  K+ VT++++I  YG HG  E A
Sbjct: 435 VSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEA 494

Query: 599 LSLFRSMKG-CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           L LF  M     ++P+ +TFV++LSACS+AGL++EG+++F +M  EY++ P+TEHY  + 
Sbjct: 495 LKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMV 554

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR+G++ +A + + E+  +     +WG+LLG+CR+H + ++ E+ A  L  +D  ++
Sbjct: 555 DLLGRMGELDKALDMINEMPMQAGP-HVWGALLGACRIHQNIKIGELAALNLFLLDPNHA 613

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GY+ LLSNIY  + NW +  K+R  ++E   +K VG S +++   V+ F + D+ H +
Sbjct: 614 --GYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGE 671

Query: 778 SHKIYEMLERLAMEMRNAG 796
           S +IY ML +L   M+  G
Sbjct: 672 SDQIYGMLRKLDARMKEEG 690



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 263/584 (45%), Gaps = 61/584 (10%)

Query: 24  LPQIHSLSPPIP-------KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTI 76
           +PQ+HS    +          K   + +R + +C       A +LF+     T  +WN +
Sbjct: 20  IPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCH------AHKLFEETPCKTVYLWNAL 73

Query: 77  IIGFVCNNLPYEAILLYSQMKKSS-PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +  +       E + L+ QM   +      DNYT S  LK+C+  + L +GK +H    +
Sbjct: 74  LRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKK 133

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
              +   FV ++L+ +YS C    DA                   KVF    +++VV W 
Sbjct: 134 KKIDNDMFVGSALIELYSKCGQMNDA------------------VKVFTEYPKQDVVLWT 175

Query: 196 TIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           +I++ Y +      A+  F RM++   + P  ++ V+   A + L D+     V+G + +
Sbjct: 176 SIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKR 235

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G  +   L +A+S + +Y + G    A  +F     ++   W++M+  Y  N     A+
Sbjct: 236 RG--FDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNAL 293

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
            LF ++++   I  + VT +SAL A +    L+ G+ +H   +     L + V  A+++ 
Sbjct: 294 NLFNEMID-KRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDM 352

Query: 374 -------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                              +DVVSW  + S + + G+  + L +   M   G   D++ +
Sbjct: 353 YMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIAL 412

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
             +L+A+S L         HA++ + G  + E + + LI++YAK   I  A ++F+    
Sbjct: 413 VKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRR 472

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELG 532
             +D  TW+++IA Y  +G  EEA   F QM  H +V PN VT  S+L AC+  G IE G
Sbjct: 473 --KDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530

Query: 533 -KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            K  H     Y L  N      ++D+  + G ++ A ++  ++P
Sbjct: 531 IKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMP 574


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 244/827 (29%), Positives = 400/827 (48%), Gaps = 92/827 (11%)

Query: 35  PKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
           P+       +R+ ++ + GR   AR++F+ + +   V WN++I G+  N    EA LL+ 
Sbjct: 167 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD 226

Query: 95  QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
                  +   +  T++ +L   A+   +   + V        +  +   +N++++ Y  
Sbjct: 227 ------AFVGKNIRTWTILLTGYAKEGRIEEAREV----FESMTERNVVSWNAMISGYVQ 276

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWY 201
                +A  +  +  E + + ++ V              ++FD M  RN V+W  ++S Y
Sbjct: 277 NGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGY 336

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
           V    Y EA   F  M R   RP    FV V  A++ L D +    +  + +K G  Y  
Sbjct: 337 VHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTG--YEG 394

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ V S+ +  Y   G  D A   F+   ERN   W TMI  + Q     +AI+L+ +V 
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP 454

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------- 373
           E  + V      ++A + V ++Q+  L       I    +   V+  NA+I         
Sbjct: 455 E--QTVATKTAMMTAYAQVGRIQKARL-------IFDEILNPNVVAWNAIIAGYTQNGML 505

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       ++  SW  MI+ FVQN    E L L+ E+ + G +    + T+ LSA 
Sbjct: 506 KEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSAC 565

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG--------------------- 459
           +N+ + ++G+  H+  ++ G  F   + + LI MYAK G                     
Sbjct: 566 ANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWN 625

Query: 460 ----------LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
                     ++  AR +FEK     RD  +W A+I+ Y Q G  E A   F  ML   +
Sbjct: 626 SLISGLSENYMLDDARVVFEKMPK--RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGI 683

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN +T+ S+L AC  +G I+LG+Q H    +   D  +FVG SLI MY K G  +    
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFC 742

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF ++PE + +T+  +++G  Q+G+ + A+ +F  M+  GI PD ++F+ VL ACS+AGL
Sbjct: 743 VFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGL 802

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VDEG   F+ M Q+Y I P   HY C+ D+LGR G + EA   ++ +  + + + IW +L
Sbjct: 803 VDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSV-IWEAL 861

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR+H + EL + VA++L +M    S    +VLLSN++A +G W+ V ++RK M+++G
Sbjct: 862 LGACRIHRNVELGQRVAERLFQMTKPKS--ATYVLLSNLFASQGMWDKVAEIRKLMKDQG 919

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           L KE G SWI V   ++ F + D+ H Q  +IY  L+      R  G
Sbjct: 920 LTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATG 966



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 169/711 (23%), Positives = 301/711 (42%), Gaps = 128/711 (18%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L     L   +P+    +  S ++  C   R   AR+LFD +    +V W  +I G+V  
Sbjct: 280 LKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHI 339

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           +  +EA  ++ +M ++      D   +  VL A     +L +  ++    I+        
Sbjct: 340 SDYWEAWDVFVKMCRT--VARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVV 397

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           V +++LN Y+   S                   DL    F+TM  RN  +W T+++ + +
Sbjct: 398 VGSAILNAYTRNGS------------------LDLAMHFFETMPERNEYSWTTMIAAFAQ 439

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
             R  +A++ +  +    +   T     +  A + +G  + A +++        E +N  
Sbjct: 440 CGRLDDAIQLYERVPEQTVATKTA----MMTAYAQVGRIQKARLIF-------DEILNPN 488

Query: 264 FVASSAIFM-YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
            VA +AI   Y + G    A+ +F     +N+  W  MI G+VQN    EA+EL ++ L 
Sbjct: 489 VVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIE-LH 547

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
               V  D +F SALSA + + ++++G+ +H+  IK        V+N +I          
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607

Query: 373 -----------------------------------------ERDVVSWNTMISAFVQNGL 391
                                                    +RDVVSW  +ISA+VQ G 
Sbjct: 608 DGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGH 667

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESY 450
            +  L L  +M  +G   + +TVT+LLSA  NL    +G+Q HA + + G   F  + + 
Sbjct: 668 GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS 727

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LI MY K G  +    +FE  +  + D  TWNA++ G  QNGL +EA   F QM    + 
Sbjct: 728 LITMYFKCGY-EDGFCVFE--EMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGIL 784

Query: 511 PNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           P+ ++   VL AC+  G ++ G    +  + +Y +   V+  T ++D+  ++G ++ A  
Sbjct: 785 PDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEA 844

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +   +P                                  ++PD++ + A+L AC     
Sbjct: 845 LIENMP----------------------------------VKPDSVIWEALLGACRIHRN 870

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG---KVVEAYEFVKELG 677
           V+ G ++ + + Q  K  P +  Y  ++++    G   KV E  + +K+ G
Sbjct: 871 VELGQRVAERLFQMTK--PKSATYVLLSNLFASQGMWDKVAEIRKLMKDQG 919



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 209/461 (45%), Gaps = 50/461 (10%)

Query: 206 RYVEAVRQFRMMLRM--GIRPSTISFVNVFPA------LSSLGDYKSADVVYGLLVKLGS 257
           R+++ ++QF+ ++R   G +       ++F        L  LG  + A  V+  +++   
Sbjct: 143 RWMDYLQQFKFVIRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQ--- 199

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
               D+   +S I  Y++ G  D AR +FD  + +N   W  ++ GY +     EA E+F
Sbjct: 200 ---RDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVF 256

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIV--------- 367
             + E + + ++     + +S   Q  +L   ++L   +  KN  +   +V         
Sbjct: 257 ESMTERNVVSWN-----AMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRM 311

Query: 368 ------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                  + + ER+ VSW  MIS +V      E   +  +M +     D      +LSA 
Sbjct: 312 SEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI 371

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           + L + ++        ++ G  +EG   + S +++ Y ++G +  A   FE     +R++
Sbjct: 372 TGLDDLELIGSLRPIAIKTG--YEGDVVVGSAILNAYTRNGSLDLAMHFFETMP--ERNE 427

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +W  MIA + Q G L++A     Q+ E      V T  +++ A   +G I+  + +   
Sbjct: 428 YSWTTMIAAFAQCGRLDDAI----QLYERVPEQTVATKTAMMTAYAQVGRIQKARLI--- 480

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
               +L+ NV    ++I  Y+++G++  A ++F K+P KNS ++  MI G+ Q+  S  A
Sbjct: 481 -FDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREA 539

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           L L   +   G  P   +F + LSAC+  G V+ G  I  L
Sbjct: 540 LELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSL 580


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 211/657 (32%), Positives = 351/657 (53%), Gaps = 34/657 (5%)

Query: 175 KYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
           K   +CK   +FD M  R+ ++W T+++ YV      EA+  F  M ++ G++       
Sbjct: 102 KQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMIS 161

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
               A     +    ++++G  VK G   +N +FV+S+ I MY ++G  +   ++F    
Sbjct: 162 VALKACGLGVNICFGELLHGFSVKSG--LINSVFVSSALIDMYMKVGKIEQGCRVFKKMT 219

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +RN   W  +I G V   + +EA+ L+   + + ++ +D  TF  AL A +    L  G+
Sbjct: 220 KRNVVSWTAIIAGLVHAGYNMEAL-LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGK 278

Query: 351 QLHAYIIKNFVALPVIVLNAV----------------IER----DVVSWNTMISAFVQNG 390
            +H   IK        V+N +                 E+    DVVSW T+I+ +VQ G
Sbjct: 279 AIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKG 338

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMES 449
            ++  +     M+K     +  T  A++SA +NL     G+Q H ++LR G +    + +
Sbjct: 339 EEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVAN 398

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            ++ +Y+KSGL+K+A  +F  +    +D  +W+ +IA Y+Q G  +EAF     M     
Sbjct: 399 SIVTLYSKSGLLKSASLVF--HGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGP 456

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN   ++SVL  C  M  +E GKQ+H   +   +D    V ++LI MYSK G +  A+ 
Sbjct: 457 KPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASK 516

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F  +   N +++T MI GY +HG S+ A++LF  +   G++PD +TF+ VL+ACS+AG+
Sbjct: 517 IFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGM 576

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VD G   F LM  EY+I PS EHY C+ D+L R G++ EA   ++ +    + + +W +L
Sbjct: 577 VDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDV-VWSTL 635

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L SCR+HG  +     A++LL +D  ++  G H+ L+NIYA +G W+    +RK M+ +G
Sbjct: 636 LRSCRVHGDVDRGRWTAEQLLRLDPNSA--GTHIALANIYAAKGRWKEAAHIRKLMKSKG 693

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
           + KE G SW++V   +N F + DQ HPQS  I  +LE L+  + +A  + I++ N D
Sbjct: 694 VIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANIGDA-RQEIRSLNDD 749



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 166/654 (25%), Positives = 301/654 (46%), Gaps = 72/654 (11%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S L ++ ++G+   +R +FD +T    + W T+I G+V  +  YEA++L+S M    P
Sbjct: 93  LNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM-WVQP 151

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D +  S  LKAC    N+  G+ +H   ++     S FV ++L++MY         
Sbjct: 152 GLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMY--------- 202

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--R 219
                    +   K +  C+VF  M +RNVV+W  I++  V     +EA+  F  M   +
Sbjct: 203 ---------MKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISK 253

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           +G    T +      A SSL  +  A  ++   +K G  +    FV ++   MY + G  
Sbjct: 254 VGYDSHTFAIALKASADSSLLHHGKA--IHTQTIKQG--FDESSFVINTLATMYNKCGKA 309

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D+  ++F+     +   W T+I  YVQ      A+E F + +    +  +  TF + +SA
Sbjct: 310 DYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAF-KRMRKSNVSPNKYTFAAVISA 368

Query: 340 VSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSW 379
            + L     G+Q+H ++++                      +    +V + +  +D++SW
Sbjct: 369 CANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISW 428

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           +T+I+ + Q G   E    +  M+++G   +   ++++LS   ++   + GKQ HA++L 
Sbjct: 429 STIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC 488

Query: 440 HGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            GI  E M  S LI MY+K G ++ A +IF  N     +  +W AMI GY ++G  +EA 
Sbjct: 489 IGIDHEAMVHSALISMYSKCGSVEEASKIF--NGMKINNIISWTAMINGYAEHGYSQEAI 546

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----- 553
             F ++    + P+ VT   VL AC+  G ++L     GF    L+     +  S     
Sbjct: 547 NLFEKISSVGLKPDYVTFIGVLTACSHAGMVDL-----GFYYFMLMTNEYQISPSKEHYG 601

Query: 554 -LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSER----ALSLFRSMKG 607
            +ID+  ++G ++ A ++   +P   + V ++T++     HG  +R    A  L R    
Sbjct: 602 CIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLR---- 657

Query: 608 CGIEPD-AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
             ++P+ A T +A+ +  +  G   E   I  LM+ +  I+     +  V D L
Sbjct: 658 --LDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKL 709



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 146/303 (48%), Gaps = 4/303 (1%)

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           A +A S    L+L  +L   + +  +     + + +  RD +SW T+I+ +V      E 
Sbjct: 81  AQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEA 140

Query: 396 LMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
           L+L   M  Q G   D   ++  L A     N   G+  H + ++ G I+   + S LID
Sbjct: 141 LILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALID 200

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G I+   ++F+K     R+  +W A+IAG    G   EA + F +M    V  + 
Sbjct: 201 MYMKVGKIEQGCRVFKKMT--KRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDS 258

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            T A  L A      +  GK +H  +I+   D++ FV  +L  MY+K G  +Y   +F K
Sbjct: 259 HTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEK 318

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +   + V++TT+I  Y Q G  E A+  F+ M+   + P+  TF AV+SAC+   +   G
Sbjct: 319 MKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWG 378

Query: 634 LQI 636
            QI
Sbjct: 379 EQI 381


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 226/723 (31%), Positives = 371/723 (51%), Gaps = 62/723 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  TYS  LK C  TR+  IG  VH    +          NSL+++YS C          
Sbjct: 65  DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKC---------- 114

Query: 166 LKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                    +++    +F  M   R++++W+ +VS +        A+  F  M+  G  P
Sbjct: 115 --------GQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV-NDLFVASSAIFMYAE-LGCFDFA 282
           +   F     A S+       D ++G +VK G  Y+ +D+ V    I M+ +  G    A
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVVKTG--YLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K+F+   ERN   W  MI   +Q  +  EAI+LF++++ L     D  T    +SA + 
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMI-LSGYEPDRFTLSGVISACAN 283

Query: 343 LQELDLGQQLHAYIIKNFVALPVIV-----------------------LNAVIERDVVSW 379
           ++ L LGQQLH+  I++ + L   V                        + +++ +V SW
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343

Query: 380 NTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
             MI+ +VQ G  D+E L L   M     + +  T ++ L A +NL    +G+Q   + +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 439 RHGIH-FEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + G      + + LI MYA+SG I  AR+    +FEKN        ++N +I  Y +N  
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN------LISYNTVIDAYAKNLN 457

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA   F ++ +  +  +  T AS+L     +G I  G+Q+H   I+  L  N  V  +
Sbjct: 458 SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNA 517

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MYS+ G I  A  VF  + ++N +++T++I G+ +HG + +AL LF  M   G+ P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +T++AVLSACS+ GLV+EG + F  M  E+ + P  EHY C+ D+LGR G + EA +F+
Sbjct: 578 LVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFI 637

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +  + + L +W + LG+CR+HG+ EL +  AK ++E +  +  P  ++LLSN+YA   
Sbjct: 638 NSMPYKADAL-VWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYILLSNLYASTS 694

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W+ V  +RK M+E+ L KE GCSW++V   V++F   D  HP++ +IY+ L+ L+++++
Sbjct: 695 KWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754

Query: 794 NAG 796
             G
Sbjct: 755 KLG 757



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 190/413 (46%), Gaps = 37/413 (8%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    AR++FD I       W  +I G+V       EA+ L+  M  +  +   
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT--HVIP 374

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++T+SS LKACA    LRIG+ V  H ++   +    V NSL++MY+      DA    
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR--- 431

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N++++NT++  Y K     EA+  F  +   G+  S
Sbjct: 432 ---------------KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++  ++K G +      V ++ I MY+  G  + A ++
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS--VCNALISMYSRCGNIESAFQV 534

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  +RN   W ++I G+ ++    +A+ELF ++LE + +  + VT+++ LSA S +  
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE-EGVRPNLVTYIAVLSACSHVGL 593

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           ++ G        K+F ++     + VI R +  +  M+    ++G   E +  +  M   
Sbjct: 594 VNEGW-------KHFKSM--YTEHGVIPR-MEHYACMVDILGRSGSLSEAIQFINSMP-- 641

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
            +  D++     L A     N ++GK     ++    H       L ++YA +
Sbjct: 642 -YKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYAST 693



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     + +NT+I  +  N    EA+ L+++++      
Sbjct: 416 SLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGA 475

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   I+     ++ V N+L++MYS C        
Sbjct: 476 SA--FTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC-------- 525

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                        +   +VF+ M  RNV++W +I++ + K     +A+  F  ML  G+R
Sbjct: 526 ----------GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575

Query: 224 PSTISFVNVFPALSSLG 240
           P+ ++++ V  A S +G
Sbjct: 576 PNLVTYIAVLSACSHVG 592


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 227/776 (29%), Positives = 403/776 (51%), Gaps = 67/776 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A   F+ +     V WN+++ G++ N    ++I ++  M +       D  T++ +LK C
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG--IEFDGRTFAIILKVC 190

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   +  +G  +H   +R   +      ++LL+MY+           G ++VE       
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK----------GKRFVES------ 234

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  +  +N V+W+ I++  V+      A++ F+ M ++    S   + +V  + +
Sbjct: 235 --LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L + +    ++   +K  S++  D  V ++ + MYA+      A+ +FDN    N + +
Sbjct: 293 ALSELRLGGQLHAHALK--SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY Q  H  +A+ LF +++    + FD+++      A + ++ L  G Q++   I
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+ ++L V V NA I+                    RD VSWN +I+A  QNG   E L 
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYA 456
           L   M +     D  T  ++L A +   +   G + H+ +++ G+     +   LIDMY+
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528

Query: 457 KSGLIKTARQIFEK-----NDSGDRDQ-------------ATWNAMIAGYTQNGLLEEAF 498
           K G+I+ A +I  +     N SG  ++              +WN++I+GY      E+A 
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
           + F +M+E  +TP+  T A+VL  C  + +  LGKQ+H   I+  L  +V++ ++L+DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           SK G ++ +  +F K   ++ VT+  MI GY  HG  E A+ LF  M    I+P+ +TF+
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           ++L AC++ GL+D+GL+ F +M+++Y + P   HY  + D+LG+ GKV  A E ++E+  
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768

Query: 679 EGNVLEIWGSLLGSCRLHGHS-ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
           E + + IW +LLG C +H ++ E+AE     LL +D ++S    + LLSN+YA+ G WE 
Sbjct: 769 EADDV-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA--YTLLSNVYADAGMWEK 825

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           V  +R+ MR   L+KE GCSW+++   ++ F   D+ HP+  +IYE L  +  EM+
Sbjct: 826 VSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 179/666 (26%), Positives = 306/666 (45%), Gaps = 70/666 (10%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S     +S V K CA+   L +GK  H H I     P+ FV N LL +Y+     + A M
Sbjct: 45  SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 104

Query: 164 VGLKYVEVD----------YSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           V  K    D          YSK + + K    F+ M  R+VV+WN+++S Y++    +++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  F  M R GI     +F  +    S L D      ++G++V++G +   D+  AS+ +
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD--TDVVAASALL 222

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+   F  + ++F    E+N+  W+ +I G VQNN    A++ F ++ +++  V   
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER---------------- 374
           + + S L + + L EL LG QLHA+ +K+  A   IV  A ++                 
Sbjct: 283 I-YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341

Query: 375 ----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
               +  S+N MI+ + Q     + L+L + +   G   D ++++ +  A + ++    G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            Q +   ++  +  +  + +  IDMY K   +  A ++F++     RD  +WNA+IA + 
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR--RDAVSWNAIIAAHE 459

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           QNG   E    F  ML   + P+  T  S+L AC   G++  G ++H   ++  +  N  
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNS--------------------VTYTTMILGY 589
           VG SLIDMYSK G+I  A  + ++  ++ +                    V++ ++I GY
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
                SE A  LF  M   GI PD  T+  VL  C+       G QI     Q  K +  
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH---AQVIKKELQ 635

Query: 650 TEHYCC--VADMLGRVGKVVEA-YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVV 705
           ++ Y C  + DM  + G + ++   F K L  +      W +++     HG  E A ++ 
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD---FVTWNAMICGYAHHGKGEEAIQLF 692

Query: 706 AKKLLE 711
            + +LE
Sbjct: 693 ERMILE 698



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 38/230 (16%)

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG-----------FSIRYLL- 544
           +F  F   L    + +    + V   C   G +ELGKQ H            F +  LL 
Sbjct: 32  SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91

Query: 545 ---DQNVFVGTSL----------------IDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
              +   FV  S+                I+ YSKS  +  A + F  +P ++ V++ +M
Sbjct: 92  VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           + GY Q+G S +++ +F  M   GIE D  TF  +L  CS+      G+QI  ++    +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV---VR 208

Query: 646 IQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +   T+     A  DM  +  + VE+    + + E+ +V   W +++  C
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV--SWSAIIAGC 256


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 228/767 (29%), Positives = 382/767 (49%), Gaps = 49/767 (6%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G   LAR++FD +       W  +I G   N    EAI L+  M       +   Y +
Sbjct: 194 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT--PYAF 251

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC +  +L IG+ +H   ++   +   +V N+L+++Y    + + AE        
Sbjct: 252 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE-------- 303

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      +F  M +R+ V +NT+++   +     +A+  F+ M   G+ P + +  
Sbjct: 304 ----------HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 353

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  A S+ G       ++    KLG  + ++  +  + + +YA+    + A   F    
Sbjct: 354 SLVVACSADGTLFRGQQLHAYTTKLG--FASNNKIEGALLNLYAKCADIETALDYFLETE 411

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             N  +WN M+  Y   +    +  +F Q ++++EIV +  T+ S L    +L +L+LG+
Sbjct: 412 VENVVLWNVMLVAYGLLDDLRNSFRIFRQ-MQIEEIVPNQYTYPSILKTCIRLGDLELGE 470

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H+ IIK    L   V + +I+                    +DVVSW TMI+ + Q  
Sbjct: 471 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 530

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
            DD+ L    +M  +G   D V +T  +SA + L+    G+Q HA     G   +   ++
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 590

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ +Y++ G I+ +   FE+ ++GD     WNA+++G+ Q+G  EEA   F +M    +
Sbjct: 591 ALVTLYSRCGKIEESYLAFEQTEAGD--NIAWNALVSGFQQSGNNEEALRVFVRMNREGI 648

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             N  T  S + A +   N++ GKQ+H    +   D    V  +LI MY+K G I+ A  
Sbjct: 649 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 708

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++  KN V++  +I  Y +HG    AL  F  M    + P+ +T V VLSACS+ GL
Sbjct: 709 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 768

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VD+G+  F+ M  EY + P  EHY CV DML R G +  A EF++E+  + + L +W +L
Sbjct: 769 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL-VWRTL 827

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L +C +H + E+ E  A  LLE++  +S    +VLLSN+YA    W+  D  R++M+E+G
Sbjct: 828 LSACVVHKNMEIGEFAAHHLLELEPEDSAT--YVLLSNLYAVSKKWDARDLTRQKMKEKG 885

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++KE G SWI+V   ++ F   DQ HP + +I+E  + L       G
Sbjct: 886 VKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 932



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/549 (28%), Positives = 255/549 (46%), Gaps = 40/549 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD M  R +  WN ++          E    F  M+   + P+  +F  V  A    G
Sbjct: 101 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR--G 158

Query: 241 DYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              + DVV  +  ++  + + D   V +  I +Y+  G  D AR++FD    ++   W  
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI G  +N    EAI LF  +  L  I+     F S LSA  +++ L++G+QLH  ++K 
Sbjct: 219 MISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 277

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
             +    V NA++                    +RD V++NT+I+   Q G  ++ + L 
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKS 458
             M   G   DS T+ +L+ A S       G+Q HAY  + G      +E  L+++YAK 
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             I+TA   F + +    +   WN M+  Y     L  +F  FRQM    + PN  T  S
Sbjct: 398 ADIETALDYFLETEV--ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 455

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L  C  +G++ELG+Q+H   I+     N +V + LIDMY+K G ++ A ++  +   K+
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 515

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI-- 636
            V++TTMI GY Q+   ++AL+ FR M   GI  D +     +SAC+    + EG QI  
Sbjct: 516 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 575

Query: 637 ---FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
                    +   Q +      +  +  R GK+ E+Y    E  E G+ +  W +L+   
Sbjct: 576 QACVSGFSSDLPFQNA------LVTLYSRCGKIEESY-LAFEQTEAGDNIA-WNALVSGF 627

Query: 694 RLHGHSELA 702
           +  G++E A
Sbjct: 628 QQSGNNEEA 636



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 175/671 (26%), Positives = 309/671 (46%), Gaps = 56/671 (8%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G  + A ++FD +   T   WN +I      NL  E   L+ +M   S   + +  T+S
Sbjct: 93  KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM--VSENVTPNEGTFS 150

Query: 112 SVLKAC-AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            VL+AC   +    + + +H   +      S  V N L+++YS                 
Sbjct: 151 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------- 194

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                 DL  +VFD +R ++  +W  ++S   K E   EA+R F  M  +GI P+  +F 
Sbjct: 195 --NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 252

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A   +   +  + ++GL++KLG  + +D +V ++ + +Y  LG    A  IF N  
Sbjct: 253 SVLSACKKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +R+   +NT+I G  Q  +  +A+ELF + + LD +  D  T  S + A S    L  GQ
Sbjct: 311 QRDAVTYNTLINGLSQCGYGEKAMELF-KRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 369

Query: 351 QLHAYIIKNFVA---------LPVIVLNAVIE-----------RDVVSWNTMISAFVQNG 390
           QLHAY  K   A         L +    A IE            +VV WN M+ A+   G
Sbjct: 370 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---G 426

Query: 391 LDDE---GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           L D+      +  +MQ +  + +  T  ++L     L + ++G+Q H+ +++        
Sbjct: 427 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 486

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S LIDMYAK G + TA  I  +     +D  +W  MIAGYTQ    ++A   FRQML+
Sbjct: 487 VCSVLIDMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 544

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             +  + V + + + AC  +  ++ G+Q+H  +       ++    +L+ +YS+ G I  
Sbjct: 545 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 604

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +   F +    +++ +  ++ G+ Q G +E AL +F  M   GI+ +  TF + + A S 
Sbjct: 605 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 664

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
              + +G Q+  ++ +       TE    +  M  + G + +A +   E+  +  V   W
Sbjct: 665 TANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV--SW 721

Query: 687 GSLLGSCRLHG 697
            +++ +   HG
Sbjct: 722 NAIINAYSKHG 732



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 236/532 (44%), Gaps = 49/532 (9%)

Query: 221 GIRPSTISFVNVFPA-LSSLGDYKSADVVYGLLVKLG-------SEYVNDLFVASSAIFM 272
           GIRP+  +   +    L + G       ++  ++KLG       SE + D ++    ++ 
Sbjct: 39  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY- 97

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
               G F    K+FD   ER    WN MI      N   E   LFV+++  + +  ++ T
Sbjct: 98  ----GAF----KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGT 148

Query: 333 FLSALSAVSQLQ-ELDLGQQLHAYII--------------------KNFVALPVIVLNAV 371
           F   L A        D+ +Q+HA I+                      FV L   V + +
Sbjct: 149 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 208

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             +D  SW  MIS   +N  + E + L  +M   G M      +++LSA   + + ++G+
Sbjct: 209 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 268

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H  +L+ G   +  + + L+ +Y   G + +A  IF  ++   RD  T+N +I G +Q
Sbjct: 269 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF--SNMSQRDAVTYNTLINGLSQ 326

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
            G  E+A   F++M    + P+  T+AS++ AC+  G +  G+QLH ++ +     N  +
Sbjct: 327 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 386

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +L+++Y+K   I  A + F +   +N V +  M++ YG       +  +FR M+   I
Sbjct: 387 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 446

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVE 668
            P+  T+ ++L  C   G ++ G QI     Q  K       Y C  + DM  ++GK+  
Sbjct: 447 VPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 503

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           A++ +      G  +  W +++     +   + A    +++L+   R+   G
Sbjct: 504 AWDILIRFA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 231/720 (32%), Positives = 371/720 (51%), Gaps = 65/720 (9%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+    T NL +GK  H   +   S    F+ N+LL MYS C S   A           
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSAR---------- 132

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----ERYVEAVRQFRMMLRMGIRPST- 226
                   +VFDT   R++V WN I+  Y  +         E +  FR+ LR  +  +T 
Sbjct: 133 --------QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL-LRASLGSTTR 183

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           ++   V     + G   +A+ V+G  +K+G E+  D+FV+ + + +Y++ G    AR +F
Sbjct: 184 MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEW--DVFVSGALVNIYSKCGRMRDARLLF 241

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQ 342
           D   ER+  +WN M+ GYVQ     EA +LF +     L  DE     V  +      + 
Sbjct: 242 DWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEF---SVQLILNGCLWAG 298

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTM 382
             +L+LG+Q+H   +K+ +   V V N+++                      D++SWN+M
Sbjct: 299 TDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSM 358

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQG-----FMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           IS+  Q+ L++E + L  ++  +G     F + S+T+     A   L   D GKQ HA+ 
Sbjct: 359 ISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHA 418

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   +  + S ++DMY K G +  A  +F  N     D   W +MI+G   NG  ++
Sbjct: 419 IKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF--NYISAPDDVAWTSMISGCVDNGNEDQ 476

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
           A   + +M +  V P+  T A+++ A + +  +E G+QLH   I+     + FVGTSL+D
Sbjct: 477 ALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVD 536

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY+K G I  A  +F K+  +N   +  M++G  QHG +E A++LF+SMK  GIEPD ++
Sbjct: 537 MYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVS 596

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           F+ +LSACS+AGL  E  +    M  +Y I+P  EHY C+ D LGR G V EA + ++ +
Sbjct: 597 FIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 656

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
             + +   I  +LLG+CR+ G  E  + VA +L  ++  +S    +VLLSNIYA    W+
Sbjct: 657 PFKASA-SINRALLGACRIQGDVETGKRVAARLFALEPFDSAA--YVLLSNIYAAANRWD 713

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V   RK M+ + ++K+ G SWIDV   ++ F   D+ HPQ+  IY+ +E +   +R  G
Sbjct: 714 DVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDG 773



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 269/564 (47%), Gaps = 57/564 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVC-----NNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           ARQ+FD+      V WN I+  +       +    E + L+  ++ S   T+    T + 
Sbjct: 131 ARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTT--RMTLAP 188

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLK C  +  L   + VH + I+       FV  +L+N+YS C    DA +         
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARL--------- 239

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +FD MR R+VV WN ++  YV+     EA + F    R G+RP   S   +
Sbjct: 240 ---------LFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 290

Query: 233 FPALSSLG--DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
                  G  D +    V+G+ VK G +  +D+ VA+S + MY+++GC  FAR++F++  
Sbjct: 291 LNGCLWAGTDDLELGKQVHGIAVKSGLD--SDVSVANSLVNMYSKMGCAYFAREVFNDMK 348

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQLQEL 346
             +   WN+MI    Q++   E++ LF+ +    L+ D      +T  +A  A   L  L
Sbjct: 349 HLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLL 408

Query: 347 DLGQQLHAYIIK---------NFVALPV-----------IVLNAVIERDVVSWNTMISAF 386
           D G+Q+HA+ IK         N   L +           IV N +   D V+W +MIS  
Sbjct: 409 DQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGC 468

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFE 445
           V NG +D+ L + + M++   M D  T   L+ A+S +   + G+Q HA +++   +   
Sbjct: 469 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDP 528

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L+DMYAK G I+ A ++F+K +   R+ A WNAM+ G  Q+G  EEA   F+ M 
Sbjct: 529 FVGTSLVDMYAKCGNIEDAYRLFKKMNV--RNIALWNAMLVGLAQHGNAEEAVNLFKSMK 586

Query: 506 EHNVTPNVVTIASVLPACNPMG-NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
            H + P+ V+   +L AC+  G   E  + LH     Y ++  +   + L+D   ++G++
Sbjct: 587 SHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLV 646

Query: 565 NYAANVFAKIPEKNSVTYTTMILG 588
             A  V   +P K S +    +LG
Sbjct: 647 QEADKVIETMPFKASASINRALLG 670



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 208/451 (46%), Gaps = 62/451 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR LFD +     V+WN ++ G+V   L  EA  L+S+  +S      D ++   
Sbjct: 232 GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRP--DEFSVQL 289

Query: 113 VLKAC--AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +L  C  A T +L +GK VH   ++   +    V NSL+NMYS          +G  Y  
Sbjct: 290 ILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK---------MGCAY-- 338

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-----S 225
                     +VF+ M+  ++++WN+++S   ++    E+V  F  +L  G++P     +
Sbjct: 339 -------FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLA 391

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +I+      A   L        ++   +K G  + +DL V S  + MY + G    A  +
Sbjct: 392 SITLATAAKACGCLVLLDQGKQIHAHAIKAG--FDSDLHVNSGILDMYIKCGDMVNAGIV 449

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+     +   W +MI G V N +  +A+ ++ ++ +   ++ D+ TF + + A S +  
Sbjct: 450 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ-SRVMPDEYTFATLIKASSCVTA 508

Query: 346 LDLGQQLHAYIIK-NFVALPVIVLNAV--------IE-----------RDVVSWNTMISA 385
           L+ G+QLHA +IK + V+ P +  + V        IE           R++  WN M+  
Sbjct: 509 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 568

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
             Q+G  +E + L   M+  G   D V+   +LSA S+      G  + AY   H +  +
Sbjct: 569 LAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH-----AGLTSEAYEYLHSMPND 623

Query: 446 -GME------SYLIDMYAKSGLIKTARQIFE 469
            G+E      S L+D   ++GL++ A ++ E
Sbjct: 624 YGIEPEIEHYSCLVDALGRAGLVQEADKVIE 654


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 223/718 (31%), Positives = 372/718 (51%), Gaps = 64/718 (8%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S +LKAC  + NL +GK +H   I         + NSL+ +YS C               
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKC--------------- 87

Query: 171 VDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG---IRPS 225
                ++    +F  M   +R++V+W+ I+S +        A+  F  ML+     I P+
Sbjct: 88  ---GDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPN 144

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-FDFARK 284
              F  +  + S+   + +   ++  L+K G  + + + V  + I M+ + G     AR 
Sbjct: 145 EYCFTALLRSCSNPLFFTTGLAIFAFLLKTG-YFDSHVCVGCALIDMFTKGGLDIQSARM 203

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD    +N   W  MI  Y Q     +A++LF ++L + E   D  T  S LSA  +L+
Sbjct: 204 VFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLL-VSEYTPDKFTLTSLLSACVELE 262

Query: 345 ELDLGQQLHAYIIKNFVALPVIV--------------------LNAVIERDVVSWNTMIS 384
              LG+QLH+++I++ +A  V V                     N ++  +V+SW  +IS
Sbjct: 263 FFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALIS 322

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH- 443
            +VQ+  + E + L   M       +  T +++L A ++L +  +GKQ H   ++ G+  
Sbjct: 323 GYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLST 382

Query: 444 FEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
              + + LI+MYA+SG ++ AR+    +FEKN       A  NA      +         
Sbjct: 383 INCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDE--------- 433

Query: 500 AFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
           +F   +EH  V  +  T A +L     +G I  G+Q+H   ++     N+ +  +LI MY
Sbjct: 434 SFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMY 493

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           SK G    A  VF  +  +N +T+T++I G+ +HG + +AL LF  M   G++P+ +T++
Sbjct: 494 SKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYI 553

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           AVLSACS+ GL+DE  + F+ M   + I P  EHY C+ D+LGR G ++EA EF+  +  
Sbjct: 554 AVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPF 613

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           + + L +W + LGSCR+H +++L E  AKK+LE +  +  P  ++LLSN+YA EG W++V
Sbjct: 614 DADAL-VWRTFLGSCRVHRNTKLGEHAAKKILEREPHD--PATYILLSNLYASEGRWDDV 670

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             +RK M+++ L KE G SWI+V   V++F   D  HPQ+ KIY+ L+ LA++++N G
Sbjct: 671 AALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLG 728



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 213/456 (46%), Gaps = 58/456 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +     V W  +I  +    L  +A+ L+ ++   S YT  D +T +S+L AC
Sbjct: 201 ARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLL-VSEYTP-DKFTLTSLLSAC 258

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E     +GK +H   IR       FV  +L++MY+             K   V+ S+  
Sbjct: 259 VELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYA-------------KSAAVENSR-- 303

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F+TM   NV++W  ++S YV++ +  EA++ F  ML   + P+  +F +V  A +
Sbjct: 304 ---KIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACA 360

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SL D+     ++G  +KLG   +N   V +S I MYA  G  + ARK F+   E+N   +
Sbjct: 361 SLPDFGIGKQLHGQTIKLGLSTIN--CVGNSLINMYARSGTMECARKAFNILFEKNLISY 418

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT       N   +++ E F   +E   +     T+   LS  + +  +  G+Q+HA I+
Sbjct: 419 NTAADA---NAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIV 475

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+     + + NA+I                     R+V++W ++IS F ++G   + L 
Sbjct: 476 KSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALE 535

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-----MESY-- 450
           L YEM + G   + VT  A+LSA S+     VG    A+   + +H+       ME Y  
Sbjct: 536 LFYEMLEIGVKPNEVTYIAVLSACSH-----VGLIDEAWKHFNSMHYNHSISPRMEHYAC 590

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           ++D+  +SGL+  A + F  +   D D   W   + 
Sbjct: 591 MVDLLGRSGLLLEAIE-FINSMPFDADALVWRTFLG 625



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 181/402 (45%), Gaps = 38/402 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++F+++     + W  +I G+V +    EAI L+  M       +C  +T+SSVLKAC
Sbjct: 302 SRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNC--FTFSSVLKAC 359

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +  IGK +H   I+   +    V NSL+NMY+                       +
Sbjct: 360 ASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARS------------------GTME 401

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F+ +  +N++++NT      K     E+      +   G+  S  ++  +    +
Sbjct: 402 CARKAFNILFEKNLISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGAA 459

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G     + ++ L+VK G  +  +L + ++ I MY++ G  + A ++F++   RN   W
Sbjct: 460 CIGTIVKGEQIHALIVKSG--FGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITW 517

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I G+ ++    +A+ELF ++LE+  +  ++VT+++ LSA S +  +D          
Sbjct: 518 TSIISGFAKHGFATKALELFYEMLEIG-VKPNEVTYIAVLSACSHVGLIDEAW------- 569

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+F ++     N  I   +  +  M+    ++GL  E +  +  M    F  D++     
Sbjct: 570 KHFNSMHY---NHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMP---FDADALVWRTF 623

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L +    RN  +G+     +L    H       L ++YA  G
Sbjct: 624 LGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEG 665



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 5/184 (2%)

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L+   T  ++  + +L AC   GN+ELGK LH   I   L  +  +  SLI +YSK G  
Sbjct: 31  LDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDW 90

Query: 565 NYAANVFAKI--PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG---IEPDAITFVA 619
             A ++F  +   +++ V+++ +I  +  + M  RAL  F  M  C    I P+   F A
Sbjct: 91  ENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTA 150

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +L +CS       GL IF  + +           C + DM  + G  +++   V +  + 
Sbjct: 151 LLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH 210

Query: 680 GNVL 683
            N++
Sbjct: 211 KNLV 214


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 227/776 (29%), Positives = 403/776 (51%), Gaps = 67/776 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A   F+ +     V WN+++ G++ N    ++I ++  M +       D  T++ +LK C
Sbjct: 91  ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG--IEFDGRTFAIILKVC 148

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   +  +G  +H   +R   +      ++LL+MY+           G ++VE       
Sbjct: 149 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK----------GKRFVES------ 192

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  +  +N V+W+ I++  V+      A++ F+ M ++    S   + +V  + +
Sbjct: 193 --LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L + +    ++   +K  S++  D  V ++ + MYA+      A+ +FDN    N + +
Sbjct: 251 ALSELRLGGQLHAHALK--SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY Q  H  +A+ LF +++    + FD+++      A + ++ L  G Q++   I
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 367

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+ ++L V V NA I+                    RD VSWN +I+A  QNG   E L 
Sbjct: 368 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 427

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYA 456
           L   M +     D  T  ++L A +   +   G + H+ +++ G+     +   LIDMY+
Sbjct: 428 LFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 486

Query: 457 KSGLIKTARQIFEK-----NDSGDRDQ-------------ATWNAMIAGYTQNGLLEEAF 498
           K G+I+ A +I  +     N SG  ++              +WN++I+GY      E+A 
Sbjct: 487 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 546

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
           + F +M+E  +TP+  T A+VL  C  + +  LGKQ+H   I+  L  +V++ ++L+DMY
Sbjct: 547 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 606

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           SK G ++ +  +F K   ++ VT+  MI GY  HG  E A+ LF  M    I+P+ +TF+
Sbjct: 607 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 666

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           ++L AC++ GL+D+GL+ F +M+++Y + P   HY  + D+LG+ GKV  A E ++E+  
Sbjct: 667 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 726

Query: 679 EGNVLEIWGSLLGSCRLHGHS-ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
           E + + IW +LLG C +H ++ E+AE     LL +D ++S    + LLSN+YA+ G WE 
Sbjct: 727 EADDV-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA--YTLLSNVYADAGMWEK 783

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           V  +R+ MR   L+KE GCSW+++   ++ F   D+ HP+  +IYE L  +  EM+
Sbjct: 784 VSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 175/653 (26%), Positives = 301/653 (46%), Gaps = 70/653 (10%)

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD---- 172
           CA+   L +GK  H H I     P+ FV N LL +Y+     + A MV  K    D    
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 173 ------YSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                 YSK + + K    F+ M  R+VV+WN+++S Y++    ++++  F  M R GI 
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
               +F  +    S L D      ++G++V++G +   D+  AS+ + MYA+   F  + 
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD--TDVVAASALLDMYAKGKRFVESL 193

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F    E+N+  W+ +I G VQNN    A++ F ++ +++  V   + + S L + + L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAAL 252

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMI 383
            EL LG QLHA+ +K+  A   IV  A ++                     +  S+N MI
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 312

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + Q     + L+L + +   G   D ++++ +  A + ++    G Q +   ++  + 
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 372

Query: 444 FE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + +  IDMY K   +  A ++F++     RD  +WNA+IA + QNG   E    F 
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFV 430

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            ML   + P+  T  S+L AC   G++  G ++H   ++  +  N  VG SLIDMYSK G
Sbjct: 431 SMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 489

Query: 563 VINYAANVFAKIPEKNS--------------------VTYTTMILGYGQHGMSERALSLF 602
           +I  A  + ++  ++ +                    V++ ++I GY     SE A  LF
Sbjct: 490 MIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 549

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADML 660
             M   GI PD  T+  VL  C+       G QI     Q  K +  ++ Y C  + DM 
Sbjct: 550 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH---AQVIKKELQSDVYICSTLVDMY 606

Query: 661 GRVGKVVEA-YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVVAKKLLE 711
            + G + ++   F K L  +      W +++     HG  E A ++  + +LE
Sbjct: 607 SKCGDLHDSRLMFEKSLRRD---FVTWNAMICGYAHHGKGEEAIQLFERMILE 656


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 228/733 (31%), Positives = 385/733 (52%), Gaps = 53/733 (7%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G   +AR LFDS      VIWN++I  +  N    EA  ++ QM K++   +    T+ S
Sbjct: 305  GNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNV--VTFVS 362

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            ++  C  + N   GK++H H ++   +    V  +LL+MY+  L  L++          D
Sbjct: 363  IIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAK-LGDLNS---------AD 412

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            +        +F  M RRN+++WN+++S Y     +  ++  F  M   G  P  IS VN+
Sbjct: 413  F--------IFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNI 464

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              A S L         +    +   E+ ++L ++++ +  Y++ G    + K+F     R
Sbjct: 465  LSACSKLEAILLGKAAHAFSFR--KEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR 522

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            N   WNT+I G V N    +A+ L +  ++ +++  D VT +S +      + L  G  L
Sbjct: 523  NAISWNTLISGCVHNGDTKKAVAL-LHKMQQEKMELDLVTLISIIPICRVAENLIQGMTL 581

Query: 353  HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
            H Y IK   A  V ++NA+I                     R +VSWN +I+ +  + L 
Sbjct: 582  HGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQ 641

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            +E +    +M ++G   + VT+  LL +   L     GK  HA+ +R G+  E  + + L
Sbjct: 642  NEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQ---GKSIHAFAVRTGVIVETPIITSL 698

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            I MYA+   I +   +FE    G  D A WNA+++ Y Q    +E+   F ++L   V P
Sbjct: 699  ISMYARFENINSFIFLFEMG--GKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEP 756

Query: 512  NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            + +T  S++ AC  + ++ L   +  + I+   D+++ +  +LID++++ G I+ A  +F
Sbjct: 757  DYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIF 816

Query: 572  AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
              +  K++V+++TMI GYG HG SE AL+L   M+  G++PD IT+ +VLSACS+ G +D
Sbjct: 817  EGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFID 876

Query: 632  EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            +G  IF+ M +E  +    EHY C+ D+LGR G++ EAY+FV++L  + +V  +  SLLG
Sbjct: 877  QGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSV-SLLESLLG 934

Query: 692  SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            +C +HG+ +L E ++  L E+D +NS  G +V+L NIYA  G W + ++VR +M ER LR
Sbjct: 935  ACIIHGNVKLGEKISSLLFELDPKNS--GSYVMLYNIYAAAGRWMDANRVRSDMEERQLR 992

Query: 752  KEVGCSWIDVGGY 764
            K  G S ++   Y
Sbjct: 993  KIPGFSLVEGNRY 1005



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 288/593 (48%), Gaps = 46/593 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P LA   F++I +P+  + N ++I  +C++  +E +L    +K        D++T+  
Sbjct: 103 GAPELALSAFEAIEKPSVFLQN-LMIRRLCDHGLFEDVLCV-YLKCRVLGCPSDDFTFPF 160

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC     + I + VHC  +R     +  +  +L++ Y+     + A +V        
Sbjct: 161 VIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLV-------- 212

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                      D + + ++V WN ++S Y       E     R +  MG++P+  +F ++
Sbjct: 213 ----------LDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASI 262

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + +        ++G +VK G  + +D F+  + I MYA  G    AR +FD+  E+
Sbjct: 263 IPLCTRMKCLDIGKSIHGFVVKSG--FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEK 320

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +WN+MI  Y QN    EA ++F Q+L+ + +  + VTF+S +           G+ L
Sbjct: 321 NVVIWNSMISAYAQNQKSSEAFKMFQQMLKAN-MQPNVVTFVSIIPCCENSANFWYGKSL 379

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           HA+++K  +   + V  A++                     R+++SWN+MIS +  NGL 
Sbjct: 380 HAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLW 439

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           +  +    +MQ +GF  D++++  +LSA S L    +GK  HA+  R        + + L
Sbjct: 440 EASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNAL 499

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +  Y+  G + ++ ++F+K     R+  +WN +I+G   NG  ++A     +M +  +  
Sbjct: 500 LAFYSDCGKLSSSFKLFQKMPL--RNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMEL 557

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           ++VT+ S++P C    N+  G  LHG++I+     +V +  +LI MY   G IN    +F
Sbjct: 558 DLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLF 617

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             +P ++ V++  +I GY  H +    ++ F  M   G +P+ +T + +L +C
Sbjct: 618 EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC 670



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 253/520 (48%), Gaps = 46/520 (8%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   SF+ +F    ++ + K    V  L+V+   + + D +V +  I     LG  + A 
Sbjct: 55  PKVTSFLRLFDLCRNIENLKPLGSV--LIVR---DLMRDEYVVAEFIISCFHLGAPELAL 109

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNN--HPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             F+   + +  + N MI     +     V  + L  +VL       DD TF   + A +
Sbjct: 110 SAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPS---DDFTFPFVIKACT 166

Query: 342 QLQELDLGQQLHAYIIK-----NFVALPVIV---------------LNAVIERDVVSWNT 381
            L  + + + +H  +++     N V    +V               L+ + + D+V+WN 
Sbjct: 167 ALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNA 226

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +IS +  NG D E   ++ ++ + G   +  T  +++   + ++  D+GK  H ++++ G
Sbjct: 227 LISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSG 286

Query: 442 IHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
               E +   LI MYA  G +  AR +F+   + +++   WN+MI+ Y QN    EAF  
Sbjct: 287 FSSDEFLTPALISMYAGGGNLFIARDLFD--SAAEKNVVIWNSMISAYAQNQKSSEAFKM 344

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F+QML+ N+ PNVVT  S++P C    N   GK LH   ++Y LD  + V T+L+ MY+K
Sbjct: 345 FQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAK 404

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +N A  +F ++P +N +++ +MI GYG +G+ E ++  F  M+  G +PDAI+ V +
Sbjct: 405 LGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNI 464

Query: 621 LSACSY--AGLVDEGLQIFDLMQQ-EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           LSACS   A L+ +    F   ++ +  +  S       +D     GK+  +++  +++ 
Sbjct: 465 LSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSD----CGKLSSSFKLFQKMP 520

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL----LEMD 713
               +   W +L+  C  +G ++ A  +  K+    +E+D
Sbjct: 521 LRNAI--SWNTLISGCVHNGDTKKAVALLHKMQQEKMELD 558


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 211/608 (34%), Positives = 334/608 (54%), Gaps = 28/608 (4%)

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           A+  F  M   G  P   +F ++    ++ GD  +   V+  L   G +  ++   A++ 
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGID--SEALAATAL 100

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
             MYA+      AR++FD    R+   WN ++ GY +N     A+E+ V++ E +    D
Sbjct: 101 ANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------- 373
            +T +S L A +  + L   ++ HA+ I++ +   V V  A+++                
Sbjct: 161 SITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD 220

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               ++ VSWN MI  + QNG   E L L   M ++G  +  V+V A L A   L   D 
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G + H  L+R G+     + + LI MY+K   +  A  +F++ D   R Q +WNAMI G 
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR--RTQVSWNAMILGC 338

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            QNG  E+A   F +M   NV P+  T+ SV+PA   + +    + +HG+SIR  LDQ+V
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           +V T+LIDMY+K G +N A  +F    E++ +T+  MI GYG HG  + A+ LF  MK  
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           GI P+  TF++VLSACS+AGLVDEG + F  M+++Y ++P  EHY  + D+LGR GK+ E
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A+ F++++  +   L ++G++LG+C+LH + ELAE  A+K+ E+  +  +  YHVLL+NI
Sbjct: 519 AWAFIQKMPMDPG-LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV--YHVLLANI 575

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           YA    W++V +VR  M + GL+K  G S I +   ++ F S    H Q+ +IY  L +L
Sbjct: 576 YANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635

Query: 789 AMEMRNAG 796
             E++  G
Sbjct: 636 IEEIKAVG 643



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 239/506 (47%), Gaps = 52/506 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T++S+LK CA   +L  G+AVH        +       +L NMY+ C    DA       
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADAR------ 114

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTI 227
                       +VFD M  R+ VAWN +V+ Y +      A+    RM    G RP +I
Sbjct: 115 ------------RVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           + V+V PA ++     +    +   ++ G  E VN   VA++ +  Y + G    AR +F
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVN---VATAILDAYCKCGDIRAARVVF 219

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D    +N+  WN MI GY QN    EA+ LF +++E + +   DV+ L+AL A  +L  L
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE-EGVDVTDVSVLAALQACGELGCL 278

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
           D G ++H  +++  +   V V+NA+I                     R  VSWN MI   
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QNG  ++ + L   MQ +    DS T+ +++ A +++ +    +  H Y +R  +H + 
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIR--LHLDQ 396

Query: 447 ---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + LIDMYAK G +  AR +F  N + +R   TWNAMI GY  +G  + A   F +
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILF--NSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    + PN  T  SVL AC+  G ++ G++        Y L+  +    +++D+  ++G
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514

Query: 563 VINYAANVFAKIPEKNSVTYTTMILG 588
            ++ A     K+P    ++    +LG
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLG 540



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 198/430 (46%), Gaps = 41/430 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L   C+ G    AR +FD +    +V WN +I G+  N    EA+ L+++M +       
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG--VDV 260

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            + +  + L+AC E   L  G  VH   +R   + +  V N+L+ MYS C          
Sbjct: 261 TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC---------- 310

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + DL   VFD + RR  V+WN ++    +     +AVR F  M    ++P 
Sbjct: 311 --------KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPD 362

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           + + V+V PAL+ + D   A  ++G  ++L  +   D++V ++ I MYA+ G  + AR +
Sbjct: 363 SFTLVSVIPALADISDPLQARWIHGYSIRLHLD--QDVYVLTALIDMYAKCGRVNIARIL 420

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  ER+   WN MI GY  +     A+ELF ++  +  IV ++ TFLS LSA S    
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACSHAGL 479

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +D G++    + +++           +E  +  + TM+    + G  DE    + +M   
Sbjct: 480 VDEGREYFTSMKEDY----------GLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP-- 527

Query: 406 GFMIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT- 463
             M   ++V  A+L A    +N ++ +++   +   G         L ++YA + + K  
Sbjct: 528 --MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDV 585

Query: 464 --ARQIFEKN 471
              R   EKN
Sbjct: 586 ARVRTAMEKN 595



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 199/440 (45%), Gaps = 46/440 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD +     V WN ++ G+  N L   A+ +  +M++       D+ T  SV
Sbjct: 109 RPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP-DSITLVSV 167

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA  R L   +  H   IR        V  ++L+ Y  C   + A  V         
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC-GDIRAARV--------- 217

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VFD M  +N V+WN ++  Y +     EA+  F  M+  G+  + +S +   
Sbjct: 218 --------VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A   LG       V+ LLV++G +  +++ V ++ I MY++    D A  +FD  L+R 
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLD--SNVSVMNALITMYSKCKRVDLASHVFDE-LDRR 326

Query: 294 TEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           T+V WN MI G  QN    +A+ LF + ++L+ +  D  T +S + A++ + +    + +
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTR-MQLENVKPDSFTLVSVIPALADISDPLQARWI 385

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H Y I+  +   V VL A+I                    ER V++WN MI  +  +G  
Sbjct: 386 HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
              + L  EM+  G + +  T  ++LSA S+    D G++    +        GME Y  
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505

Query: 451 LIDMYAKSGLIKTARQIFEK 470
           ++D+  ++G +  A    +K
Sbjct: 506 MVDLLGRAGKLDEAWAFIQK 525



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           L  A  AF  M      P + T  S+L  C   G++  G+ +H       +D      T+
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL-FRSMKGCGIEP 612
           L +MY+K      A  VF ++P ++ V +  ++ GY ++G++  A+ +  R  +  G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 613 DAITFVAVL 621
           D+IT V+VL
Sbjct: 160 DSITLVSVL 168


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 228/706 (32%), Positives = 372/706 (52%), Gaps = 49/706 (6%)

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A +  R  R G+A+H   ++  +     V NSL+  Y     SL   ++G  YV      
Sbjct: 23  AASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYC----SLPRPLLGAAYV------ 72

Query: 176 YDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM--GIRPSTISFVN 231
                 VF  +    R+V +WN++++  +     V A+  FR M+     + PS  SF  
Sbjct: 73  ------VFADIPAALRDVASWNSLLN-PLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAA 125

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEY-VNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            F A + +    +  V + L  KL S    N++FV+++ + MY +LG    A+++FD  L
Sbjct: 126 AFTAAARVPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGML 185

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   W  M+ GY       EA ELF  +L+   +  ++    + LSAVS    L +G 
Sbjct: 186 HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGT 245

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           QLH  ++K+ +   V V N+++                    ER+ ++W+ MI+ + QNG
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNG 305

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
             +    +  +M   GF     T   +L+A S++    VGKQTH  +++ G   +  ++S
Sbjct: 306 EANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKS 365

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMYAK G I  A+  F +    D D   W AMI G+ QNG  EEA + + +M +  +
Sbjct: 366 ALVDMYAKCGCIGDAKDGFHQLYDVD-DVVLWTAMITGHVQNGEHEEALMLYSRMDKQGI 424

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ +T+ SVL AC  +  ++LGKQLH   ++        VGT+L  MYSK G +  +  
Sbjct: 425 IPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMV 484

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF ++P+++ +++ ++I  + QHG    AL +F  MK  G  PD ITF+ +LSACS+ GL
Sbjct: 485 VFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGL 544

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGS 688
           VD G   F  M ++Y + P+ +HY C+ D+L R G++ EA +F+  +  + G  L  W  
Sbjct: 545 VDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCL--WRI 602

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           +LG+CR     ++     ++L+E+ T +S    ++LLSNIYA +  W +V++VR  MR R
Sbjct: 603 VLGACRSLRDFDVGAYAGEQLMELGTEDS--SAYILLSNIYAAQRKWNDVERVRHLMRLR 660

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           G+ K++GCSW+++   V+ F   +Q+HP++  I   L RLA  M++
Sbjct: 661 GVSKDLGCSWVELYNRVHVFVVGEQQHPEAENINVELIRLAKHMKD 706



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 205/447 (45%), Gaps = 45/447 (10%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L+  C+ G    A+++FD +     V W  ++ G+       EA  L+  M +  P    
Sbjct: 165 LNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEK- 223

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           + +  ++VL A +    L +G  +H   ++        V NSL+ MY+     +DA M  
Sbjct: 224 NEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKA-ECMDAAM-- 280

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF + + RN + W+ +++ Y +      A R F  M   G  P+
Sbjct: 281 ---------------RVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPT 325

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +FV V  A S +G        + L+VKLG E    ++V S+ + MYA+ GC   A+  
Sbjct: 326 EFTFVGVLNACSDMGALVVGKQTHCLMVKLGFE--TQVYVKSALVDMYAKCGCIGDAKDG 383

Query: 286 FDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           F    + +  V W  MI G+VQN    EA+ L+ + ++   I+   +T  S L A + L 
Sbjct: 384 FHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSR-MDKQGIIPSYLTVTSVLRACACLA 442

Query: 345 ELDLGQQLHAYIIKNFVAL--------------------PVIVLNAVIERDVVSWNTMIS 384
            LDLG+QLHA I+K   +L                     ++V   + +RDV+SWN++IS
Sbjct: 443 ALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIIS 502

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            F Q+G   + L +  EM+ +G   D +T   LLSA S++   D G      + +     
Sbjct: 503 VFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLI 562

Query: 445 EGMESY--LIDMYAKSGLIKTARQIFE 469
             ++ Y  ++D+ +++G +K A+   +
Sbjct: 563 PTLDHYACMVDILSRAGQLKEAKDFID 589



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/406 (22%), Positives = 180/406 (44%), Gaps = 49/406 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F S     ++ W+ +I G+  N     A  ++ QM  SS +T  + +T+  VL AC
Sbjct: 279 AMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMH-SSGFTPTE-FTFVGVLNAC 336

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L +GK  HC  ++       +V ++L++MY+ C    DA+    +  +VD     
Sbjct: 337 SDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVD----- 391

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                       +VV W  +++ +V+   + EA+  +  M + GI PS ++  +V  A +
Sbjct: 392 ------------DVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACA 439

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        ++  ++K        +  A S   MY++ G  + +  +F    +R+   W
Sbjct: 440 CLAALDLGKQLHAQILKCRFSLGGSVGTALST--MYSKCGNLEDSMVVFRRMPDRDVISW 497

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N++I  + Q+    +A+++F + ++L+    D +TF++ LSA S +  +D G      + 
Sbjct: 498 NSIISVFSQHGRGSDALDMF-EEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMT 556

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT-- 415
           K++  +P +            +  M+    + G          ++++    IDS+T+   
Sbjct: 557 KDYNLIPTL----------DHYACMVDILSRAG----------QLKEAKDFIDSITIDHG 596

Query: 416 -----ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
                 +L A  +LR+ DVG      L+  G         L ++YA
Sbjct: 597 TCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYA 642


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 248/812 (30%), Positives = 412/812 (50%), Gaps = 73/812 (8%)

Query: 26   QIHSLSPPIPKLKTPTIRSRLSKICQE--GRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
            QIH+    +P +    + + L  +  +  G    A ++FD I    +V WN+II  +   
Sbjct: 264  QIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR 323

Query: 84   NLPYEAILLYSQMK--------KSSPYTSCDNYTYSSVLKACA----ETRNLRIGKAVHC 131
                 A  L+S M+        + + YT C   T +  L  C     E    RI K+   
Sbjct: 324  GDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKS--- 380

Query: 132  HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             F+R       +V ++L+N ++                   Y   D    +F  M  RN 
Sbjct: 381  GFLR-----DLYVGSALVNGFAR------------------YGLMDCAKMIFKQMYDRNA 417

Query: 192  VAWNTIVSWYVKTERYVEAVRQFRMM--LRMGIRPSTISFVNVFPALSSLGDYK-SADVV 248
            V  N ++    +  +  EA + F+ M  L      S +  ++ F   S+L + K     V
Sbjct: 418  VTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEV 477

Query: 249  YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
            +  L + G      + + ++ + MY +    D A  +F     ++T  WN+MI G   N 
Sbjct: 478  HAYLFRSGLVDAR-ISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536

Query: 309  HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
               EA+  F   ++ + +V  + + +S LS+ S L  L LG+Q+H    K  + L V V 
Sbjct: 537  RFEEAVSCF-HTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVS 595

Query: 369  NAVI--------------------ERDVVSWNTMISAFVQNGLDD-EGLMLVYEMQKQGF 407
            NA++                    E D VSWN+ I A  +      + L    EM + G+
Sbjct: 596  NALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGW 655

Query: 408  MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
              + VT   +L+A S+     +G Q HA +L++ +  +  +E+ L+  Y K   ++    
Sbjct: 656  RPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEI 715

Query: 467  IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
            IF +  S  RD+ +WN+MI+GY  +G+L +A      M++     +  T A+VL AC  +
Sbjct: 716  IFSRM-SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASV 774

Query: 527  GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
              +E G ++H  ++R  L+ +V VG++L+DMY+K G I+YA+  F  +P +N  ++ +MI
Sbjct: 775  ATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMI 834

Query: 587  LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
             GY +HG  ++AL +F  MK  G  PD +TFV VLSACS+ GLVDEG + F  M + Y +
Sbjct: 835  SGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGL 894

Query: 647  QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS-CRLHG-HSELAEV 704
             P  EH+ C+ D+LGR G V +  +F+K +  + N+L IW ++LG+ CR +G ++EL + 
Sbjct: 895  SPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNIL-IWRTVLGACCRANGRNTELGQR 953

Query: 705  VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
             AK L+E++ +N++   +VLLSN++A  GNWE+V + R  MR+  ++K+ GCSW+++   
Sbjct: 954  AAKMLIELEPQNAVN--YVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDG 1011

Query: 765  VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V+ F + DQ HP+  KIYE L+ L  ++R+AG
Sbjct: 1012 VHLFVAGDQTHPEKEKIYEKLKELMNKIRDAG 1043



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 170/677 (25%), Positives = 305/677 (45%), Gaps = 87/677 (12%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPT 69
           L  P P AT       Q+         LK P +  RL K     + +L R+   S+   T
Sbjct: 50  LVSPIPIATDDLIWHKQV--------SLKVPIVAWRLLKDRLPTKINLQRR--GSLRDAT 99

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYS--------SVLKACAE 119
               NT + G  C+  P  A  L+ ++  K +S YT   +YT+S        S       
Sbjct: 100 ----NTCVAG--CD-FPEMASHLFMRLLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKT 152

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
           + +L     +H    +       F  N+L+N+Y    + + A                  
Sbjct: 153 SSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSAR----------------- 195

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            K+FD M ++N+V+W+ ++S Y +     EA   F+ ++  G+ P+  +  +   A    
Sbjct: 196 -KLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQC 254

Query: 240 GD--YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLERNTEV 296
           G    K    ++  + KL    V+D+ +++  + MY++  G  D A ++FD    RN+  
Sbjct: 255 GSTGIKLGMQIHAFICKLPC--VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVT 312

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVF----DDVTFLSALSAVSQLQE--LDLGQ 350
           WN++I  Y +    V A +LF  V++++ +      ++ T  S ++A   L +  L L +
Sbjct: 313 WNSIISVYCRRGDAVSAFKLF-SVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLE 371

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
           Q+   I K+     + V +A++                    +R+ V+ N ++    +  
Sbjct: 372 QMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQH 431

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK----QTHAYLLRHGIHFE- 445
             +E   +  EM K    I+S ++  LLS  +   N   GK    + HAYL R G+    
Sbjct: 432 QGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDAR 490

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L++MY K   I  A  +F+   S  +D  +WN+MI+G   N   EEA   F  M
Sbjct: 491 ISIGNALVNMYGKCTAIDNACSVFQLMPS--KDTVSWNSMISGLDHNERFEEAVSCFHTM 548

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             + + P+  ++ S L +C+ +G + LG+Q+HG   ++ LD +V V  +L+ +Y+++  I
Sbjct: 549 KRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 608

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSE-RALSLFRSMKGCGIEPDAITFVAVLSA 623
           N    VF ++PE + V++ + I    ++  S  +AL  F  M   G  P+ +TF+ +L+A
Sbjct: 609 NECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668

Query: 624 CSYAGLVDEGLQIFDLM 640
            S   ++  G QI  L+
Sbjct: 669 VSSFSVLGLGHQIHALI 685


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 251/784 (32%), Positives = 411/784 (52%), Gaps = 83/784 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS--SPYTSCDNYTYSSVLK 115
           AR+ FDSI     V  N++I  +        A  ++S M+K         + YT+ S++ 
Sbjct: 231 ARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLIS 290

Query: 116 ACAETRN----------LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           A     N           R+ K+   H +        +V ++L++ ++            
Sbjct: 291 ATCSLANSGLVLLEQLLTRVEKSGFLHDL--------YVGSALVSGFA------------ 330

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRP 224
            K   + Y+K      +F  M  RNVV+ N ++   V+ +R  EAV  F  M   + + P
Sbjct: 331 -KAGSIGYAK-----NIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNP 384

Query: 225 -STISFVNVFPALSSL--GDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFD 280
            S +  +  FP    L  G  K ++V +  L++ G   +N  + + +  I MYA+ G  +
Sbjct: 385 NSYMIILTAFPEFHVLENGKRKGSEV-HAFLIRSG--LLNAQIAIGNGLINMYAKCGAIN 441

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A  +F     +++  WN+MI G  QN   +EA++ F Q +   E+   + T +SALS+ 
Sbjct: 442 DACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTF-QEMRRTELYPSNFTMISALSSC 500

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           + L  + +G+QLH   +K  + L V V NA++                    + D VSWN
Sbjct: 501 ASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWN 560

Query: 381 TMISAFVQNGLDDEGLML-----VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           ++I A      D E  ML        M + G+  + VT   +L+A S+L   ++GKQ HA
Sbjct: 561 SLIGALA----DSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHA 616

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            +L+  +  +  +E+ L+  Y K G +     IF +  S  +D+ +WN+MI+GY  N LL
Sbjct: 617 LVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM-SDRQDEVSWNSMISGYIHNELL 675

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            +A      M++     +  T A+VL AC  +  +E G ++HG S+R  L+ ++ +G++L
Sbjct: 676 PKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSAL 735

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +DMY+K G I+YA+  F  +P +N  ++ +MI GY +HG   ++L LF  MK  G  PD 
Sbjct: 736 VDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDH 795

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           +TFV VLSACS+AGLV+EG   FD M + Y + P  EH+ C+ D+LGRVG++ +  +F+ 
Sbjct: 796 VTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLN 855

Query: 675 ELGEEGNVLEIWGSLLGS-CRLHG-HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           ++  + NVL IW ++LG+ CR +G ++ L    A+ LLEM+  N++   ++LLSN+YA  
Sbjct: 856 QMPVKPNVL-IWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVN--YILLSNMYASG 912

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W++V K R  MR+  ++KE GCSW+ +   V+ F + D+ HP+   IYE L+ L  +M
Sbjct: 913 GKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKM 972

Query: 793 RNAG 796
           R AG
Sbjct: 973 RLAG 976



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/676 (24%), Positives = 317/676 (46%), Gaps = 62/676 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++FD +     V W+ +I G+  N +P EA  L+ +M         ++Y + SV++AC
Sbjct: 127 GRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMP--NHYAFGSVIRAC 184

Query: 118 AET--RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            E     L+ G  +H    +          N L++MY   L              VDY++
Sbjct: 185 QECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGM------------VDYAR 232

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVN 231
                + FD++  RN+V+ N+++S Y +    V A   F  M +     G++P+  +F +
Sbjct: 233 -----RAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGS 287

Query: 232 VFPALSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +  A  SL +     ++  LL ++  S +++DL+V S+ +  +A+ G   +A+ IF    
Sbjct: 288 LISATCSLAN-SGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMS 346

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN    N +I G V+     EA+ELF+++   D +  +  +++  L+A  +   L+ G+
Sbjct: 347 YRNVVSLNGLIIGLVRQKRGEEAVELFMEM--KDSVELNPNSYMIILTAFPEFHVLENGK 404

Query: 351 ----QLHAYIIKN-FVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
               ++HA++I++  +   + + N +I                     +D V+WN+MI+ 
Sbjct: 405 RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITG 464

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
             QN    E +    EM++      + T+ + LS+ ++L    VG+Q H   L+ G+  +
Sbjct: 465 LDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLD 524

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG-LLEEAFVAFRQ 503
             + + L+ +Y + G +K  ++ F      D D  +WN++I     +   + EA  +F  
Sbjct: 525 VSVSNALLALYGECGYVKECQKAFSL--MLDYDHVSWNSLIGALADSEPSMLEAVESFLV 582

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M+     PN VT  ++L A + +   ELGKQ+H   ++  +  +  +  +L+  Y K G 
Sbjct: 583 MMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGD 642

Query: 564 INYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           + Y  N+F+++ ++ + V++ +MI GY  + +  +A+ +   M   G   D  TF  VLS
Sbjct: 643 MGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLS 702

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           AC+    ++ G+++     +   ++        + DM  + G++  A  F + +      
Sbjct: 703 ACATVATLERGMEVHGCSVRAC-LESDIVIGSALVDMYAKCGRIDYASRFFEMMPARN-- 759

Query: 683 LEIWGSLLGSCRLHGH 698
           L  W S++     HGH
Sbjct: 760 LYSWNSMISGYARHGH 775



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 274/573 (47%), Gaps = 57/573 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   + G    A+ +F  ++    V  N +IIG V      EA+ L+ +MK S      
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS---VEL 382

Query: 106 DNYTYSSVLKACAETRNL----RIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLD 160
           +  +Y  +L A  E   L    R G  VH   IR    N    + N L+NMY+ C +  D
Sbjct: 383 NPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIND 442

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                  C VF  M  ++ V WN++++   + ++++EAV+ F+ M R 
Sbjct: 443 A------------------CVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRT 484

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            + PS  + ++   + +SLG     + ++   +KLG +   D+ V+++ + +Y E G   
Sbjct: 485 ELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL--DVSVSNALLALYGECGYVK 542

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHP--VEAIELFVQVLELDEIVFDDVTFLSALS 338
             +K F   L+ +   WN++IG  + ++ P  +EA+E F+ ++       + VTF++ L+
Sbjct: 543 ECQKAFSLMLDYDHVSWNSLIGA-LADSEPSMLEAVESFLVMMRAGWDP-NRVTFITILA 600

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVV 377
           AVS L   +LG+Q+HA ++K  VA    + NA++                      +D V
Sbjct: 601 AVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN+MIS ++ N L  + + +V+ M ++G  +D  T   +LSA + +   + G + H   
Sbjct: 661 SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCS 720

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           +R  +  +  + S L+DMYAK G I  A + FE   +  R+  +WN+MI+GY ++G   +
Sbjct: 721 VRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPA--RNLYSWNSMISGYARHGHGTK 778

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLI 555
           +   F QM      P+ VT   VL AC+  G +  G       S  Y L   +   + ++
Sbjct: 779 SLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMV 838

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           D+  + G +N   +   ++P K +V     +LG
Sbjct: 839 DLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLG 871



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 206/428 (48%), Gaps = 39/428 (9%)

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           K A+ ++  L K G  +VNDLF+ ++ I +YA +G     RK+FD    RN   W+ +I 
Sbjct: 90  KDAEELHLQLFKNG--FVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLIS 147

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE--LDLGQQLHAYIIKNF 360
           GY +N  P EA ELF +++  D  + +   F S + A  +  E  L  G Q+H  + K  
Sbjct: 148 GYTRNRMPNEACELFRKMVS-DGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQ 206

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
               V   N +I                      R++VS N+MIS + Q G       + 
Sbjct: 207 YVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIF 266

Query: 400 YEMQKQ----GFMIDSVTVTALLSAASNLRNQDVG--KQTHAYLLRHG-IHFEGMESYLI 452
             MQK+    G   +  T  +L+SA  +L N  +   +Q    + + G +H   + S L+
Sbjct: 267 STMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALV 326

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTP 511
             +AK+G I  A+ IF+K     R+  + N +I G  +    EEA   F +M +   + P
Sbjct: 327 SGFAKAGSIGYAKNIFQKMSY--RNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNP 384

Query: 512 N-VVTIASVLPACNPMGNIEL-GKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAA 568
           N  + I +  P  + + N +  G ++H F IR  LL+  + +G  LI+MY+K G IN A 
Sbjct: 385 NSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDAC 444

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF  +  K+SVT+ +MI G  Q+     A+  F+ M+   + P   T ++ LS+C+  G
Sbjct: 445 VVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLG 504

Query: 629 LVDEGLQI 636
            +  G Q+
Sbjct: 505 WISVGEQL 512


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 218/688 (31%), Positives = 351/688 (51%), Gaps = 91/688 (13%)

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V WN +V  ++K      A+     MLR G +P   +      A   L  Y     ++GL
Sbjct: 115 VWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGL 174

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE---VWNTMIGGYVQNN 308
           +   G E  +++FV ++ + MY+  G  + A  +FD    +  +    WN+++  +V+ +
Sbjct: 175 ICCNGFE--SNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGS 232

Query: 309 HPVEAIELFVQVLELDEIVF--------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +P  A+ELF    E+  IV         D ++ ++ L A + L+ L   +++H+Y I+N 
Sbjct: 233 NPRTALELFS---EMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNG 289

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
                 V NA+I+                    +DVVSWN M++ + Q+G       L  
Sbjct: 290 TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFE 349

Query: 401 EMQKQGFMID-----------------------------------SVTVTALLSAASNLR 425
            M+K+   +D                                   SVT+ +LLSA ++L 
Sbjct: 350 NMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLG 409

Query: 426 NQDVGKQTHAYLLRHGI-----------HFEGMESY--LIDMYAKSGLIKTARQIFEKND 472
               G + HAY L+  +             E +  Y  LIDMY+K    K AR IF+   
Sbjct: 410 ALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIP 469

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIE 530
             +R+  TW  MI GY Q G   +A   F +M+   + V PN  TI+ +L AC  +  + 
Sbjct: 470 RRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALR 529

Query: 531 LGKQLHGFSIRYL-LDQNV-FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +GKQ+H +  R+   + +V FV   LIDMYSK G ++ A NVF  +P++N V++T+M+ G
Sbjct: 530 MGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           YG HG  + AL +F  M+  G  PD I+F+ +L ACS++G+VD+GL  FD+M+++Y +  
Sbjct: 590 YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVA 649

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           S EHY CV D+L R G++ +A++ ++E+  E + + IW +LL +CR+H + ELAE    K
Sbjct: 650 SAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAV-IWVALLSACRVHSNVELAEYALNK 708

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L+ M   N   G + L+SNIYA    W++V ++R+ M++ G++K  GCSW+        F
Sbjct: 709 LVNMKAEND--GSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASF 766

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              D+ HP S +IY +LERL   ++  G
Sbjct: 767 FVGDRSHPLSPEIYSLLERLIGRIKVMG 794



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 178/681 (26%), Positives = 302/681 (44%), Gaps = 129/681 (18%)

Query: 20  PPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P   LP    +SP    L T  + S L+  C  G    A  + + +T    V WN ++  
Sbjct: 70  PLAPLPSHSYVSPK--SLGTGVVASYLA--C--GATKDALSVLERVTPSPAVWWNLLVRE 123

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
            +       AI +  +M ++   T  D++T    LKAC E  +   G+A+H   I C   
Sbjct: 124 HIKEGHLDRAIGVSCRMLRAG--TKPDHFTLPYALKACGELPSYCCGRALH-GLICCNGF 180

Query: 140 PSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR---NVVAWN 195
            S  FV N+L+ MYS C S  DA +                  VFD + R+   +V++WN
Sbjct: 181 ESNVFVCNALVAMYSRCGSLEDASL------------------VFDEITRKGIDDVISWN 222

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRM------GIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +IV+ +VK      A+  F  M  +        R   IS VN+ PA +SL        ++
Sbjct: 223 SIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIH 282

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
              ++ G+    D FV ++ I  YA+ G  + A K+F+    ++   WN M+ GY Q+ +
Sbjct: 283 SYAIRNGT--FADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGN 340

Query: 310 PVEAIELFVQV----LELDEIVF------------------------------DDVTFLS 335
              A ELF  +    + LD I +                              + VT +S
Sbjct: 341 FGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIIS 400

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFV------------ALPVIVLNAVI----------- 372
            LSA + L  L  G ++HAY +K  +               ++V NA+I           
Sbjct: 401 LLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKA 460

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLS 419
                      ER+VV+W  MI  + Q G  ++ L +  EM  + + +  ++ T++ +L 
Sbjct: 461 ARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILM 520

Query: 420 AASNLRNQDVGKQTHAYLLRH-----GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           A ++L    +GKQ HAY+ RH      ++F  + + LIDMY+K G + TAR +F+     
Sbjct: 521 ACAHLAALRMGKQIHAYVTRHHEYEPSVYF--VANCLIDMYSKCGDVDTARNVFDSMPK- 577

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            R++ +W +M++GY  +G  +EA   F +M +    P+ ++   +L AC+  G ++ G  
Sbjct: 578 -RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG-- 634

Query: 535 LHGFSIRYLLDQNVFVG----TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGY 589
           L+ F I    D +V         +ID+ ++ G ++ A     ++P E ++V +  ++   
Sbjct: 635 LNYFDI-MRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693

Query: 590 GQHG---MSERALSLFRSMKG 607
             H    ++E AL+   +MK 
Sbjct: 694 RVHSNVELAEYALNKLVNMKA 714



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           ++  Y   G  K A  + E+          WN ++  + + G L+ A     +ML     
Sbjct: 89  VVASYLACGATKDALSVLERVTPSP--AVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T+   L AC  + +   G+ LHG       + NVFV  +L+ MYS+ G +  A+ V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206

Query: 571 FAKIPEK---NSVTYTTMILGYGQHGMSERALSLFRSM------KGCGIEPDAITFVAVL 621
           F +I  K   + +++ +++  + +      AL LF  M      K      D I+ V +L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266

Query: 622 SACS 625
            AC+
Sbjct: 267 PACA 270


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 211/608 (34%), Positives = 334/608 (54%), Gaps = 28/608 (4%)

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           A+  F  M   G  P   +F ++    ++ GD  +   V+  L   G +  ++   A++ 
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGID--SEALAATAL 100

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
             MYA+      AR++FD    R+   WN ++ GY +N     A+E+ V++ E +    D
Sbjct: 101 ANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------- 373
            +T +S L A +  + L   ++ HA+ I++ +   V V  A+++                
Sbjct: 161 SITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD 220

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               ++ VSWN MI  + QNG   E L L   M ++G  +  V+V A L A   L   D 
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G + H  L+R G+     + + LI MY+K   +  A  +F++ D   R Q +WNAMI G 
Sbjct: 281 GMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDR--RTQVSWNAMILGC 338

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            QNG  E+A   F +M   NV P+  T+ SV+PA   + +    + +HG+SIR  LDQ+V
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           +V T+LIDMY+K G +N A  +F    E++ +T+  MI GYG HG  + A+ LF  MK  
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           GI P+  TF++VLSACS+AGLVDEG + F  M+++Y ++P  EHY  + D+LGR GK+ E
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A+ F++++  +   L ++G++LG+C+LH + ELAE  A+K+ E+  +  +  YHVLL+NI
Sbjct: 519 AWAFIQKMPMDPG-LSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV--YHVLLANI 575

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           YA    W++V +VR  M + GL+K  G S I +   ++ F S    H Q+ +IY  L +L
Sbjct: 576 YANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKL 635

Query: 789 AMEMRNAG 796
             E++  G
Sbjct: 636 IEEIKAVG 643



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 239/506 (47%), Gaps = 52/506 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T++S+LK CA   +L  G+AVH        +       +L NMY+ C    DA       
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADAR------ 114

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTI 227
                       +VFD M  R+ VAWN +V+ Y +      A+    RM    G RP +I
Sbjct: 115 ------------RVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           + V+V PA ++     +    +   ++ G  E VN   VA++ +  Y + G    AR +F
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVN---VATAILDAYCKCGDIRAARVVF 219

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D    +N+  WN MI GY QN    EA+ LF +++E + +   DV+ L+AL A  +L  L
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVE-EGVDVTDVSVLAALQACGELGCL 278

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
           D G ++H  +++  +   V V+NA+I                     R  VSWN MI   
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QNG  ++ + L   MQ +    DS T+ +++ A +++ +    +  H Y +R  +H + 
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIR--LHLDQ 396

Query: 447 ---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + LIDMYAK G +  AR +F  N + +R   TWNAMI GY  +G  + A   F +
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILF--NSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    + PN  T  SVL AC+  G ++ G++        Y L+  +    +++D+  ++G
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514

Query: 563 VINYAANVFAKIPEKNSVTYTTMILG 588
            ++ A     K+P    ++    +LG
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLG 540



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 198/430 (46%), Gaps = 41/430 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L   C+ G    AR +FD +    +V WN +I G+  N    EA+ L+++M +       
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG--VDV 260

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            + +  + L+AC E   L  G  VH   +R   + +  V N+L+ MYS C          
Sbjct: 261 TDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC---------- 310

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + DL   VFD + RR  V+WN ++    +     +AVR F  M    ++P 
Sbjct: 311 --------KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPD 362

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           + + V+V PAL+ + D   A  ++G  ++L  +   D++V ++ I MYA+ G  + AR +
Sbjct: 363 SFTLVSVIPALADISDPLQARWIHGYSIRLHLD--QDVYVLTALIDMYAKCGRVNIARIL 420

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  ER+   WN MI GY  +     A+ELF ++  +  IV ++ TFLS LSA S    
Sbjct: 421 FNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACSHAGL 479

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +D G++    + +++           +E  +  + TM+    + G  DE    + +M   
Sbjct: 480 VDEGREYFTSMKEDY----------GLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP-- 527

Query: 406 GFMIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT- 463
             M   ++V  A+L A    +N ++ +++   +   G         L ++YA + + K  
Sbjct: 528 --MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDV 585

Query: 464 --ARQIFEKN 471
              R   EKN
Sbjct: 586 ARVRTAMEKN 595



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 199/440 (45%), Gaps = 46/440 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD +     V WN ++ G+  N L   A+ +  +M++       D+ T  SV
Sbjct: 109 RPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP-DSITLVSV 167

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA  R L   +  H   IR        V  ++L+ Y  C   + A  V         
Sbjct: 168 LPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC-GDIRAARV--------- 217

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VFD M  +N V+WN ++  Y +     EA+  F  M+  G+  + +S +   
Sbjct: 218 --------VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAAL 269

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A   LG       V+ LLV++G +  +++ V ++ I MY++    D A  +FD  L+R 
Sbjct: 270 QACGELGCLDEGMRVHELLVRIGLD--SNVSVMNALITMYSKCKRVDLASHVFDE-LDRR 326

Query: 294 TEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           T+V WN MI G  QN    +A+ LF + ++L+ +  D  T +S + A++ + +    + +
Sbjct: 327 TQVSWNAMILGCAQNGCSEDAVRLFTR-MQLENVKPDSFTLVSVIPALADISDPLQARWI 385

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H Y I+  +   V VL A+I                    ER V++WN MI  +  +G  
Sbjct: 386 HGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFG 445

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
              + L  EM+  G + +  T  ++LSA S+    D G++    +        GME Y  
Sbjct: 446 KAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT 505

Query: 451 LIDMYAKSGLIKTARQIFEK 470
           ++D+  ++G +  A    +K
Sbjct: 506 MVDLLGRAGKLDEAWAFIQK 525



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 1/129 (0%)

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           L  A  AF  M      P + T  S+L  C   G++  G+ +H       +D      T+
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL-FRSMKGCGIEP 612
           L +MY+K      A  VF ++P ++ V +  ++ GY ++G++  A+ +  R  +  G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 613 DAITFVAVL 621
           D+IT V+VL
Sbjct: 160 DSITLVSVL 168


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 209/558 (37%), Positives = 314/558 (56%), Gaps = 32/558 (5%)

Query: 262 DLFVASSAIFMYA--ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           D F AS  +   A  + G   +AR +F+      T   N++I GY   N P +AI LF Q
Sbjct: 71  DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQ 129

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI------------ 366
           ++ L  +  D  TF S   +   L E   G+QLH +  K  F +   I            
Sbjct: 130 LMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCG 186

Query: 367 -------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                  V + ++ + VVSW TMI A+ Q  L  E + L   M+      + +T+  +L+
Sbjct: 187 CLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLT 246

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A +  R+ +  KQ H Y+   GI F   + S L+D+Y K G    AR +F  N   +++ 
Sbjct: 247 ACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLF--NKMPEKNL 304

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
             WN MI G+ ++   EEA   F +M    V  + VT+AS+L AC  +G +ELGK LH +
Sbjct: 305 FCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVY 364

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
             +  ++ +V +GT+L+DMY+K G I  A  VF ++PEK+ +T+T +I+G    G   +A
Sbjct: 365 IEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKA 424

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L LF  M+   ++PDAITFV VL+ACS+AGLV+EG+  F+ M  +Y IQPS EHY C+ D
Sbjct: 425 LELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVD 484

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           MLGR G++ EA + ++ +    +   + G LL +CR+HG+  +AE  A++L+E+D +N  
Sbjct: 485 MLGRAGRIAEAEDLIQNMPMAPDYFVLVG-LLSACRIHGNLVVAERAAQQLIELDPKNG- 542

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G +VLLSNIY+   NWE   K+R+ M ER ++K  GCS I+VGG V+ F   D  HPQS
Sbjct: 543 -GTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQS 601

Query: 779 HKIYEMLERLAMEMRNAG 796
            +IYE L+ +   +++AG
Sbjct: 602 SEIYETLDDMMRRLKSAG 619



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 222/483 (45%), Gaps = 73/483 (15%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKIC---QEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QIH+          P   S++   C     G    AR +F+ I  PTT   N+II G
Sbjct: 55  QLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRG 114

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +   NLP +AIL Y  M         D +T+ S+ K+C     L  GK +HCH  +    
Sbjct: 115 YTNKNLPRQAILFYQLMMLQG--LDPDRFTFPSLFKSCGV---LCEGKQLHCHSTKLGFA 169

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              ++ N+L+NMYS C   + A                   KVFD M  ++VV+W T++ 
Sbjct: 170 SDAYIQNTLMNMYSNCGCLVSAR------------------KVFDKMVNKSVVSWATMIG 211

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            Y + +   EA++ FR M    ++P+ I+ VNV  A +   D ++A  V+  + + G  +
Sbjct: 212 AYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGF 271

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
                + S+ + +Y + GC+  AR +F+   E+N   WN MI G+V+++   EA+ LF +
Sbjct: 272 --HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNE 329

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
            ++L  +  D VT  S L A + L  L+LG+ LH YI K  + + V +  A++       
Sbjct: 330 -MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCG 388

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        E+DV++W  +I      G   + L L +EMQ      D++T   +L+
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLA 448

Query: 420 AASNLRNQDVGKQTHAYLLRHGI-HFEGM----------ESY--LIDMYAKSGLIKTARQ 466
           A S           HA L+  GI +F  M          E Y  ++DM  ++G I  A  
Sbjct: 449 ACS-----------HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAED 497

Query: 467 IFE 469
           + +
Sbjct: 498 LIQ 500



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 212/416 (50%), Gaps = 30/416 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+ +        N+I+  Y       +A+  +++M+  G+ P   +F ++F +   L +
Sbjct: 96  VFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            K    ++    KLG  + +D ++ ++ + MY+  GC   ARK+FD  + ++   W TMI
Sbjct: 156 GKQ---LHCHSTKLG--FASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 210

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
           G Y Q + P EAI+LF + +E+  +  +++T ++ L+A ++ ++L+  +Q+H YI +  +
Sbjct: 211 GAYAQWDLPHEAIKLF-RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGI 269

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
               ++ +A++                    E+++  WN MI+  V++   +E L L  E
Sbjct: 270 GFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNE 329

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           MQ  G   D VT+ +LL A ++L   ++GK  H Y+ +  I  +  + + L+DMYAK G 
Sbjct: 330 MQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGS 389

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           I++A ++F+  +  ++D  TW A+I G    G   +A   F +M    V P+ +T   VL
Sbjct: 390 IESAMRVFQ--EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447

Query: 521 PACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            AC+  G +  G    +    +Y +  ++     ++DM  ++G I  A ++   +P
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 209/633 (33%), Positives = 337/633 (53%), Gaps = 34/633 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIR--PSTISFVNVFPALS 237
           ++FD M +++ ++W T++S YV      EA+  F+ M +  G+R  P  +S  +    L+
Sbjct: 70  RMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLN 129

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S  D    ++++G  VK G   VN +FV S+ + MY + G     R++F     RN   W
Sbjct: 130 S--DVNYGELLHGYAVKTG--LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             +I G V+  +  EA+  F ++     + +D  TF  AL A +    L+ G+++HA  +
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K    +   V N +                      RDVVSW T+I+  VQ G ++  + 
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               M++     +  T  A++S  +NL   + G+Q HA +L  G+     +E+ ++ MYA
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G + ++  IF  ++   RD  +W+ +IAGY+Q G + EAF     M      P    +
Sbjct: 365 KCGQLTSSSVIF--HEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFAL 422

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL AC  M  +E GKQLH + +   L+    V ++LI+MY K G I  A+ +F     
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            + V++T MI GY +HG S   + LF  +   G+ PD++TF+ VLSACS+AGLVD G + 
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRY 542

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M ++Y+I PS EHY C+ D+L R G++ +A   ++ +    + + +W +LL +CR+H
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV-VWSTLLRACRVH 601

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G  E     A+++L+++   +  G H+ L+NIYA +G W     +RK M+ +G+ KE G 
Sbjct: 602 GDVERGRRTAERILQLEP--NCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGW 659

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           SWI V   V  F + D+ HPQ   IY ML+ LA
Sbjct: 660 SWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 303/651 (46%), Gaps = 50/651 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           I +   P    +L ++ + G    AR++FD +++   + W T+I G+V  N   EA+LL+
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M+  S     D +  S   KAC    ++  G+ +H + ++     S FV ++LL+MY+
Sbjct: 104 KNMRVESGL-RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYT 162

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                 +                    +VF  M  RNVV+W  I++  V+     EA+  
Sbjct: 163 KNGKIFEGR------------------RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R  +   + +F     A +  G       ++   +K G +  +  FVA++   MY
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS--FVANTLATMY 262

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            + G  ++   +F+    R+   W T+I   VQ      A++ F+++ E D +  ++ TF
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD-VSPNEYTF 321

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
            + +S  + L  ++ G+QLHA I+   +A  + V N+++                     
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD+VSW+T+I+ + Q G   E   L+  M+ +G       + ++LSA  N+   + GKQ 
Sbjct: 382 RDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 434 HAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           HAY+L  G+    M  S LI+MY K G I+ A +IF+  +  + D  +W AMI GY ++G
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE--NDDIVSWTAMINGYAEHG 499

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVG 551
              E    F ++    + P+ VT   VL AC+  G ++LG +  +  S +Y +  +    
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHY 559

Query: 552 TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +ID+  ++G ++ A ++   +P  ++ V ++T++     HG  ER       +    +
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERI--LQL 617

Query: 611 EPD-AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           EP+ A T + + +  +  G   E   I  LM+ +  I+     +  V D++
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLV 668



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 202/443 (45%), Gaps = 34/443 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD   +++   W T+I GYV  N   EA+ LF  +     +  D      A  A  
Sbjct: 68  ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
              +++ G+ LH Y +K  +   V V +A+++                    R+VVSW  
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+  V+ G + E L+   EM +     DS T    L A ++    + G++ HA  ++ G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
                 + + L  MY K G ++    +FEK     RD  +W  +I    Q G  E A  A
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM--RDVVSWTTIITTLVQMGQEECAVQA 305

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M E +V+PN  T A+V+  C  +  IE G+QLH   +   L  ++ V  S++ MY+K
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  ++ +F ++  ++ V+++T+I GY Q G    A  L   M+  G +P      +V
Sbjct: 366 CGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASV 425

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKVVEAYEFVKEL 676
           LSAC    +++ G Q+       Y +    EH   V     +M  + G + EA       
Sbjct: 426 LSACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD-- 478

Query: 677 GEEGNVLEIWGSLLGSCRLHGHS 699
             E + +  W +++     HG+S
Sbjct: 479 AAENDDIVSWTAMINGYAEHGYS 501


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 231/726 (31%), Positives = 382/726 (52%), Gaps = 58/726 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
           A ++F          WNTII G +  N  Y A+  L+ +M     +   D+YTYSSVL A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEM--CVGFQKPDSYTYSSVLAA 260

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    LR GK V    I+C +    FV  +++++Y+ C    +A               
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAM-------------- 305

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VF  +   +VV+W  ++S Y K+     A+  F+ M   G+  +  +  +V  A 
Sbjct: 306 ----EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTE 295
                   A  V+  + K G  +  D  VA++ I MY++ G  D + ++F++  + +   
Sbjct: 362 GRPSMVCEASQVHAWVFKSG--FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           + N MI  + Q+  P +AI LF ++L+ + +  D+ +  S LS    L  L+LG+Q+H Y
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQ-EGLRTDEFSVCSLLSV---LDCLNLGKQVHGY 475

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            +K+ + L + V +++                      +D   W +MIS F + G   E 
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLID 453
           + L  EM   G   D  T+ A+L+  S+  +   GK+ H Y LR GI  +GM+  S L++
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID-KGMDLGSALVN 594

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G +K ARQ++++    + D  + +++I+GY+Q+GL+++ F+ FR M+    T + 
Sbjct: 595 MYSKCGSLKLARQVYDRLP--ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
             I+S+L A        LG Q+H +  +  L     VG+SL+ MYSK G I+     F++
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I   + + +T +I  Y QHG +  AL ++  MK  G +PD +TFV VLSACS+ GLV+E 
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
               + M ++Y I+P   HY C+ D LGR G++ EA  F+  +  + + L +WG+LL +C
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL-VWGTLLAAC 831

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           ++HG  EL +V AKK +E++  ++  G ++ LSNI AE G W+ V++ RK M+  G++KE
Sbjct: 832 KIHGEVELGKVAAKKAIELEPSDA--GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889

Query: 754 VGCSWI 759
            G S +
Sbjct: 890 PGWSSV 895



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 185/709 (26%), Positives = 333/709 (46%), Gaps = 68/709 (9%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           ++ Q H L   +        +S LS     G    A +LFD+I +P  V  N +I G+  
Sbjct: 68  KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           + L  E++  +S+M         +  +Y SV+ AC+  +     + V CH I+       
Sbjct: 128 HRLFEESLRFFSKMHFLG--FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE 185

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V ++L++++S  L   DA                   KVF      NV  WNTI++  +
Sbjct: 186 VVESALIDVFSKNLRFEDAY------------------KVFRDSLSANVYCWNTIIAGAL 227

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           + + Y      F  M     +P + ++ +V  A +SL   +   VV   ++K G+E   D
Sbjct: 228 RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE---D 284

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +FV ++ + +YA+ G    A ++F      +   W  M+ GY ++N    A+E+F + + 
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE-MR 343

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
              +  ++ T  S +SA  +   +    Q+HA++ K+   L   V  A+I          
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         +++V  N MI++F Q+    + + L   M ++G   D  +V +LLS
Sbjct: 404 LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
               L   ++GKQ H Y L+ G+  +  + S L  +Y+K G ++ + ++F+      +D 
Sbjct: 462 VLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF--KDN 516

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           A W +MI+G+ + G L EA   F +ML+   +P+  T+A+VL  C+   ++  GK++HG+
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           ++R  +D+ + +G++L++MYSK G +  A  V+ ++PE + V+ +++I GY QHG+ +  
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE---GLQIFDLMQQEYKIQPSTEHYC- 654
             LFR M   G   D+    ++L A   A L DE   G Q+   +    KI   TE    
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKA---AALSDESSLGAQVHAYIT---KIGLCTEPSVG 690

Query: 655 -CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +  M  + G + +  +   ++   G  L  W +L+ S   HG +  A
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQI--NGPDLIAWTALIASYAQHGKANEA 737



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 262/528 (49%), Gaps = 52/528 (9%)

Query: 122 NLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           NLR  K +  H +R +  P   F+  SLL+ YS   S  DA                   
Sbjct: 63  NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAA------------------ 104

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FDT+ + +VV+ N ++S Y +   + E++R F  M  +G   + IS+ +V  A S+L 
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
               +++V    +K+G  Y     V S+ I ++++   F+ A K+F + L  N   WNT+
Sbjct: 165 APLFSELVCCHTIKMG--YFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI 222

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVF---DDVTFLSALSAVSQLQELDLGQQLHAYII 357
           I G ++N +     +LF ++     + F   D  T+ S L+A + L++L  G+ + A +I
Sbjct: 223 IAGALRNQNYGAVFDLFHEMC----VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278

Query: 358 KN-----FVALPVIVLNA----------VIER----DVVSWNTMISAFVQNGLDDEGLML 398
           K      FV   ++ L A          V  R     VVSW  M+S + ++      L +
Sbjct: 279 KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
             EM+  G  I++ TVT+++SA           Q HA++ + G + +  + + LI MY+K
Sbjct: 339 FKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSK 398

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           SG I  + Q+FE  D   R Q   N MI  ++Q+    +A   F +ML+  +  +  ++ 
Sbjct: 399 SGDIDLSEQVFEDLDDIQR-QNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           S+L     +  + LGKQ+HG++++  L  ++ VG+SL  +YSK G +  +  +F  IP K
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           ++  + +MI G+ ++G    A+ LF  M   G  PD  T  AVL+ CS
Sbjct: 515 DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 220/708 (31%), Positives = 357/708 (50%), Gaps = 80/708 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           Y+++L A A T    +  A+HC  +R   +P   ++ N LL  Y        A  V    
Sbjct: 9   YAALLSAAARTEP-HVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAM 67

Query: 169 VEVDYSKYDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
              +   Y+ +               +F +M +R++V++N +++ +     + +AVR + 
Sbjct: 68  PHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYL 127

Query: 216 MMLRM--GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
            +L+    +RPS I+   +  A S+LGD       +  +++LG  +  + FV S  + MY
Sbjct: 128 ALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLG--FGANAFVGSPLVDMY 185

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A++     A++ FD    +N  ++NTMI G ++     EA  LF       E++ D    
Sbjct: 186 AKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLF-------EVMTD---- 234

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
                                                   RD ++W TM++ F QNGL+ 
Sbjct: 235 ----------------------------------------RDSITWTTMVTGFTQNGLES 254

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESY 450
           E L +   M+ QG  ID  T  ++L+A   L   + GKQ HAY++R       F G  S 
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVG--SA 312

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY+K   IK A  +F +     ++  +W A+I GY QNG  EEA   F +M    + 
Sbjct: 313 LVDMYSKCRSIKLAETVFRRMTC--KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T+ SV+ +C  + ++E G Q H  ++   L   + V  +L+ +Y K G I  A  +
Sbjct: 371 PDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F ++   + V++T ++ GY Q G ++  + LF  M   G++PD +TF+ VLSACS AG V
Sbjct: 431 FDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFV 490

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           ++G   F  MQ+++ I P  +HY C+ D+  R GK+ EA EF+K++    + +  WG+LL
Sbjct: 491 EKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIG-WGTLL 549

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            +CRL G  E+ +  A+ LLE+D +N  P  +VLL +++A +G W  V ++R+ MR+R +
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQN--PASYVLLCSMHAAKGQWNEVAQLRRGMRDRQV 607

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +KE GCSWI     V+ F++ DQ HP S  IYE LE L  +M   G K
Sbjct: 608 KKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYK 655



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 231/543 (42%), Gaps = 53/543 (9%)

Query: 10  LPPPPPT--------ATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQL 61
           LP PPPT        A     +  +   +   +P     T  + LS +           L
Sbjct: 35  LPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEAL 94

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F S+T+   V +N +I GF       +A+ +Y  + ++         T S+++ A +   
Sbjct: 95  FASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALG 154

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK---YD- 177
           +  +GK  HC  +R     + FV + L++MY+      DA+     + EVD      Y+ 
Sbjct: 155 DRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRA---FDEVDSKNVVMYNT 211

Query: 178 -----LVCK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                L CK       +F+ M  R+ + W T+V+ + +     EA+  FR M   GI   
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAID 271

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++  A  +L   +    ++  +++  + Y +++FV S+ + MY++      A  +
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIR--TRYDDNVFVGSALVDMYSKCRSIKLAETV 329

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     +N   W  +I GY QN    EA+ +F + ++ D I  DD T  S +S+ + L  
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSE-MQRDGIDPDDYTLGSVISSCANLAS 388

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L+ G Q H   + + +   + V NA++                      D VSW  ++S 
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGI-H 443
           + Q G   E + L  +M  +G   D VT   +LSA S     + G+   H+    HGI  
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVP 508

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            +   + +ID+Y++SG +K A + F K      D   W  +++     G +E    A   
Sbjct: 509 IDDHYTCMIDLYSRSGKLKEAEE-FIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAEN 567

Query: 504 MLE 506
           +LE
Sbjct: 568 LLE 570



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 40/404 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ +T   ++ W T++ GF  N L  EA+ ++ +M+      + D YT+ S+L AC
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQG--IAIDQYTFGSILTAC 282

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H + IR   + + FV ++L++MYS C S        +K  E       
Sbjct: 283 GALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRS--------IKLAET------ 328

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +N+++W  ++  Y +     EAVR F  M R GI P   +  +V  + +
Sbjct: 329 ----VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     + L   L S  ++ + V+++ + +Y + G  + A ++FD     +   W
Sbjct: 385 NLASLEEGAQFHCL--ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E I+LF ++L    +  D VTF+  LSA S+   ++ G+     + 
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLA-KGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQ 501

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+   +P+             +  MI  + ++G   E    + +M       D++    L
Sbjct: 502 KDHGIVPID----------DHYTCMIDLYSRSGKLKEAEEFIKQMPMHP---DAIGWGTL 548

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSG 459
           LSA     + ++GK     LL   I  +   SY  L  M+A  G
Sbjct: 549 LSACRLRGDMEIGKWAAENLLE--IDPQNPASYVLLCSMHAAKG 590


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 193/534 (36%), Positives = 317/534 (59%), Gaps = 36/534 (6%)

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN++I    ++   VEA+  F  + +L  +  +  TF  A+ + S L +L  G+Q 
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKL-SLKPNRSTFPCAIKSCSALLDLHSGRQA 174

Query: 353 HAYII------KNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           H   +        FV+  ++              + + +  R++VSW +MI+ +VQN   
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234

Query: 393 DEGLMLVYE--MQKQG------FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              L+L  E  +++ G        +D + + ++LSA S +  + + +  H +L++ G   
Sbjct: 235 HRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEG 294

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           + G+E+ L+D YAK G +  +R++F+     +RD  +WN++IA Y QNG+  E+   F +
Sbjct: 295 DLGVENTLMDAYAKCGELGVSRRVFD--GMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352

Query: 504 MLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M++   +  N VT+++VL AC   G+  LGK +H   I+  L+ NVFVGTS+IDMY K G
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A   F ++ EKN  +++ M+ GYG HG ++ AL +F  M   G++P+ ITFV+VL+
Sbjct: 413 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 472

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+AGL++EG   F  M  E+ ++P  EHY C+ D+LGR G + EA++ +K +    + 
Sbjct: 473 ACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDF 532

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +WG+LLG+CR+H + +L E+ A+KL E+D +N   GY+VLLSNIYA+ G WE+V+++R
Sbjct: 533 V-VWGALLGACRMHKNVDLGEISARKLFELDPKNC--GYYVLLSNIYADAGRWEDVERMR 589

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             M+  GL K  G S +D+ G V+ F   D+EHPQ  KIYE LE+L+M+++  G
Sbjct: 590 ILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVG 643



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/564 (24%), Positives = 237/564 (42%), Gaps = 99/564 (17%)

Query: 5   SVPLPLPPPPPTATP----PPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
           SV   LP    TA      P     Q    S          +R R S       P+L   
Sbjct: 53  SVSRDLPNVQITAQHFLIFPEHTAFQFSGFSKRRSICAGAVLRRRYSN-----NPNLT-T 106

Query: 61  LFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           LF+     T V  WN++I     +    EA+  +S M+K S     +  T+   +K+C+ 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS--LKPNRSTFPCAIKSCSA 164

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +L  G+  H   +     P  FV ++L++MYS C    DA                  
Sbjct: 165 LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR----------------- 207

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML----------RMGIRPSTISF 229
             +FD +  RN+V+W ++++ YV+ +    A+  F+  L           + + P  I+ 
Sbjct: 208 -TLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAM 264

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V+V  A S + +    + V+G L+K G E   DL V ++ +  YA+ G    +R++FD  
Sbjct: 265 VSVLSACSRVSEKSITEGVHGFLIKRGFE--GDLGVENTLMDAYAKCGELGVSRRVFDGM 322

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WN++I  Y QN    E++E+F ++++  EI ++ VT  + L A +      LG
Sbjct: 323 AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLG 382

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           + +H  +IK  +   V V  ++I                    E++V SW+ M++ +  +
Sbjct: 383 KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMH 442

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G   E L + YEM   G   + +T  ++L+A S           HA LL  G H+    S
Sbjct: 443 GHAKEALEVFYEMNMAGVKPNYITFVSVLAACS-----------HAGLLEEGWHWFKAMS 491

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
           +  D+                    +     +  M+    + G L+EAF   + M    +
Sbjct: 492 HEFDV--------------------EPGVEHYGCMVDLLGRAGYLKEAFDLIKGM---KL 528

Query: 510 TPNVVTIASVLPACNPMGNIELGK 533
            P+ V   ++L AC    N++LG+
Sbjct: 529 RPDFVVWGALLGACRMHKNVDLGE 552



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 188/417 (45%), Gaps = 43/417 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM------KKSSPYT 103
           C E R   AR LFD I+    V W ++I G+V N+  + A+LL+ +        +     
Sbjct: 200 CGELRD--ARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEV 257

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D     SVL AC+      I + VH   I+        V N+L++ Y+ C        
Sbjct: 258 CVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKC-------- 309

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-I 222
                 E+  S+     +VFD M  R+V++WN+I++ Y +     E++  F  M++ G I
Sbjct: 310 -----GELGVSR-----RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEI 359

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
             + ++   V  A +  G  +    ++  ++K+G E  +++FV +S I MY + G  + A
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLE--SNVFVGTSIIDMYCKCGKVEMA 417

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           RK FD   E+N + W+ M+ GY  + H  EA+E+F + + +  +  + +TF+S L+A S 
Sbjct: 418 RKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE-MNMAGVKPNYITFVSVLAACSH 476

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
              L+ G      +   F           +E  V  +  M+    + G   E   L+  M
Sbjct: 477 AGLLEEGWHWFKAMSHEF----------DVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           + +    D V   ALL A    +N D+G+ +   L        G    L ++YA +G
Sbjct: 527 KLRP---DFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG 580


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 248/786 (31%), Positives = 402/786 (51%), Gaps = 100/786 (12%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q  D   + T    N  ++  +  NL  EA+ L+ +  +     + D  T + VLKAC  
Sbjct: 33  QPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG 92

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             + ++G  +H   I         V NSL+NMY  C + L                +D  
Sbjct: 93  --DSKLGCQIHAFAISSGFISHVTVPNSLMNMY--CKAGL----------------FDRA 132

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             VF+ +   ++V+WNT++S + +++            LRM         V     L+  
Sbjct: 133 LVVFENLNNPDIVSWNTVLSGFQRSDD------ALNFALRMNFTGVAFDAVTCTTVLAFC 186

Query: 240 GDYKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            D++    ++G      ++K G +   ++FV ++ I MY+       AR+          
Sbjct: 187 SDHEG--FIFGFQLHSRILKCGLDC--EVFVGNALITMYSRCCRLVEARR---------- 232

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
                        N  +EAI +F+++L+ + +  D V+F  A+SA    +E +LG+Q+H+
Sbjct: 233 ------------GNSGLEAILVFLEMLK-EGMKLDHVSFTGAISACGHGKEFELGRQIHS 279

Query: 355 YIIKNFVALPVIVLN--------------------AVIERDVVSWNTMISAFVQNGLDDE 394
             +K      V V N                    ++I+R+VVSW TMIS       +++
Sbjct: 280 LAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISIS-----EED 334

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
              L  EM++ G   + VT   L+ A +     + G+  H   ++     E  + + LI 
Sbjct: 335 ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLIT 394

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK   +  + ++FE+ +   R+  +WN++I+GY QNGL +EA   F   L  +  PN 
Sbjct: 395 MYAKFESMSDSMKVFEELNY--REIISWNSLISGYAQNGLWQEALQTFLSALMES-RPNE 451

Query: 514 VTIASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            T  SVL +      I +  G++ H   ++  L+ N  V ++L+DMY+K G I  +  VF
Sbjct: 452 FTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVF 511

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           ++ P KN V +T +I  + +HG  E  ++LF+ M+  G++PD+ITF+AV++AC   G+VD
Sbjct: 512 SETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVD 571

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            G Q+F+ M +++ I+PS EHY  + DMLGR G++ EA EFV ++   G  L +  SLLG
Sbjct: 572 TGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQI-PGGAGLSVLQSLLG 630

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG+ ++A+ VA  L+EM+   S  G +VL+SN+YAE+G WE V K+RK MRERG+R
Sbjct: 631 ACRIHGNVDMAKRVADDLIEMEPMGS--GSYVLMSNLYAEKGEWEKVAKIRKGMRERGVR 688

Query: 752 KEVGCSWIDVGG-----YVNRFASKDQEHPQSHKIYEMLERLAMEMR---NAGNKTIQNS 803
           KE+G SW+DVG      Y++ F+S D+ HPQS +IY M E L +EM+       + I   
Sbjct: 689 KEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMKFLEKERKRKIMPD 748

Query: 804 NVDATP 809
           N   TP
Sbjct: 749 NHSGTP 754



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 242/528 (45%), Gaps = 102/528 (19%)

Query: 26  QIHSLSPPIPKLKTPTI-RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+ +     +   T+  S ++  C+ G    A  +F+++  P  V WNT++ GF  ++
Sbjct: 99  QIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSD 158

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+    +M  +    + D  T ++VL  C++      G  +H   ++C  +   FV
Sbjct: 159 ---DALNFALRMNFTG--VAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFV 213

Query: 145 YNSLLNMYSTCL---------SSLDAEMV-------GLKY-------------------- 168
            N+L+ MYS C          S L+A +V       G+K                     
Sbjct: 214 GNALITMYSRCCRLVEARRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFEL 273

Query: 169 --------VEVDYSKYDLVCK-----------------VFDTMRRRNVVAWNTIVSWYVK 203
                   V++ Y  +  VC                  VF+++  RNVV+W T++S  + 
Sbjct: 274 GRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS--IS 331

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
            E   +A   F  M R G+ P+ ++FV +  A++     +   +++G+ VK  + ++++L
Sbjct: 332 EE---DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVK--TSFLSEL 386

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            V++S I MYA+      + K+F+    R    WN++I GY QN    EA++ F+  L  
Sbjct: 387 NVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALM- 445

Query: 324 DEIVFDDVTFLSALSAVSQLQELDL--GQQLHAYIIKNFVALPVIVLNAVIE-------- 373
            E   ++ TF S LS+++  + + +  GQ+ H++I+K  +    IV +A+++        
Sbjct: 446 -ESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSI 504

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLM-LVYEMQKQGFMIDSVTVTALLSA 420
                       ++ V+W  +ISA  ++G D E +M L  +M+++G   DS+T  A+++A
Sbjct: 505 CESLGVFSETPLKNEVAWTAIISAHARHG-DYEAVMNLFKDMEREGVKPDSITFLAVITA 563

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQ 466
                  D G Q    +++  +     E Y  ++DM  ++G +K A +
Sbjct: 564 CGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEE 611


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 226/724 (31%), Positives = 381/724 (52%), Gaps = 50/724 (6%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           E +  Y ++KK+   T  D   +  +LKA +   + R GK++H   I+   +    + NS
Sbjct: 30  EVVSHYHEIKKAGIQT-VDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGNS 87

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTER 206
           ++  Y  C                    +D+   VF++MRR R+ V+WN ++  ++    
Sbjct: 88  IMGFYIRC------------------GDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGA 129

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
            V  +  F      G  P+  + V V  A   LG      +++G L+K G   ++ +  +
Sbjct: 130 LVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNS 189

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
             ++++ A++ C   AR++FD   E++   W+ MIGGY+Q   P   +++F +++ +  I
Sbjct: 190 LLSMYVDADMEC---ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGI 246

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI-------------- 366
             D V  +S L A +  +++  G+ +H  +I        FV   +I              
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFK 306

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V N + +R+ VSWN+M+S FV N    E   L+  M+K+    D VT+  +L       +
Sbjct: 307 VFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVH 366

Query: 427 QDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               K  H  ++R G    E + S LID YAK  LI+ A ++F +     RD  +W+ MI
Sbjct: 367 PFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRR--RDVVSWSTMI 424

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +G+   G  +EA   +++M    V PNV+TI ++L AC+    ++  K  HG +IR    
Sbjct: 425 SGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFA 484

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             V VGT+++DMYSK G I  +   F ++  KN VT++ MI  YG +G++  AL+LF  M
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           K  G++P+ +T ++VL+ACS+ GLV+EGL +F  M QE  ++P  EHY C+ DMLGR GK
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604

Query: 666 VVEAYEFVKELGEE-GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  A E +K + +   N   IWGSLL +CR +G +EL +    ++LE++  NS  GY ++
Sbjct: 605 LDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNS-AGY-LV 662

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
            S++YA +G W++  ++R   +E+G++   G S + +     RF + D  HP+S +I+ M
Sbjct: 663 ASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSM 722

Query: 785 LERL 788
            ++L
Sbjct: 723 AQQL 726



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 219/472 (46%), Gaps = 45/472 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     + W+ +I G++    P   + ++ +M    P    D     SVLKAC
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL-VPGIEPDGVVMVSVLKAC 260

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A +R++  G+ VH   I    +   FV NSL++MYS C  +  A                
Sbjct: 261 ASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA---------------- 304

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVF+ + +RN V+WN+++S +V  E Y EA      M +  +    ++ VN+     
Sbjct: 305 --FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                     ++ ++++ GSE  N+L V S+ I  YA+    + A ++F     R+   W
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSE-ANEL-VLSALIDAYAKCYLIEIAWEVFARMRRRDVVSW 420

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           +TMI G+     P EAI ++ Q ++ D +  + +T ++ L A S   EL   +  H   I
Sbjct: 421 STMISGFAHCGKPDEAIAVY-QEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAI 479

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +   A  V V  AV++                    +++V+W+ MI+A+  NGL  E L 
Sbjct: 480 RQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALA 539

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMY 455
           L  EM++ G   + VT  ++L+A S+    + G      +++      G E Y  ++DM 
Sbjct: 540 LFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDML 599

Query: 456 AKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++G + TA ++ +      ++ A+ W ++++     GL E    A  ++LE
Sbjct: 600 GRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLE 651



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 195/415 (46%), Gaps = 44/415 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ I++   V WN+++ GFV N    EA  L S M+K    T  D  T  ++L+ C
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET--DEVTLVNILQIC 361

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +    K++HC  IR  S  +  V ++L++ Y+ C             +E+ +    
Sbjct: 362 KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCY-----------LIEIAW---- 406

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  MRRR+VV+W+T++S +    +  EA+  ++ M R  ++P+ I+ +N+  A S
Sbjct: 407 ---EVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACS 463

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              + K +   +G+ ++ G  + +++ V ++ + MY++ G    +R+ FD    +N   W
Sbjct: 464 VTAELKRSKWAHGVAIRQG--FASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + MI  Y  N    EA+ LF + ++   +  + VT LS L+A S    ++ G  L   ++
Sbjct: 522 SAMIAAYGMNGLAHEALALFAE-MKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMV 580

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ---KQGFMIDSVTV 414
           +             +E     ++ M+    + G  D  + ++  M    K G  I     
Sbjct: 581 QEL----------GLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNLKNGASI----W 626

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
            +LLSA  +    ++GK+  + +L   +       YL+   MYA  GL   A +I
Sbjct: 627 GSLLSACRSYGLTELGKEAISRVLE--LEPSNSAGYLVASSMYAADGLWDDAARI 679



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 9/316 (2%)

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           +W   I     NG   E +   +E++K G     V+V   +  A +  +   GK  HA L
Sbjct: 14  NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL 73

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   F  + + ++  Y + G    A  +F       RD  +WN +I G+  NG L  
Sbjct: 74  IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRR-SRDSVSWNILIHGHLDNGALVA 132

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
               F         PN+ T+  V+ AC  +G    G  LHG+ I+        V  SL+ 
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC-GIEPDAI 615
           MY  +  +  A  +F ++ EK+ + ++ MI GY Q    +  L +FR M    GIEPD +
Sbjct: 193 MYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGV 251

Query: 616 TFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
             V+VL AC+ +  V  G  +  L + + +      E+   + DM  +      A++   
Sbjct: 252 VMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN--SLIDMYSKCKDAGSAFKVFN 309

Query: 675 ELGEEGNVLEIWGSLL 690
           E+ +  NV   W S+L
Sbjct: 310 EISQRNNV--SWNSML 323



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 28/273 (10%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +A ++F  + R   V W+T+I GF     P EAI +Y +M +       +  T  ++L+A
Sbjct: 404 IAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRD--LVKPNVITIINLLEA 461

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+ T  L+  K  H   IR        V  ++++MYS C   L +               
Sbjct: 462 CSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASR-------------- 507

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               + FD +  +N+V W+ +++ Y       EA+  F  M R G++P+ ++ ++V  A 
Sbjct: 508 ----RAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAAC 563

Query: 237 SSLGDYKSADVVYGLLVK-LGSEYVNDLFVASSAIFMYAELGCFDFARKIF----DNCLE 291
           S  G  +    ++  +V+ LG E   + +  S  + M    G  D A ++     DN L+
Sbjct: 564 SHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLGRAGKLDTAIEVIKAMPDN-LK 620

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
               +W +++             E   +VLEL+
Sbjct: 621 NGASIWGSLLSACRSYGLTELGKEAISRVLELE 653


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 196/570 (34%), Positives = 316/570 (55%), Gaps = 40/570 (7%)

Query: 260 VNDLFVASSAIFMYA--ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           + D F +S  I   A  E    D+   I  N    NT  WN  I G++ + +P EA+ L+
Sbjct: 7   IEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLY 66

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            +VL+ D    D+ T+     A ++L  + +G ++  +++       + V NAVI     
Sbjct: 67  KRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVS 126

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RD+VSWN+MI+ +V+ G   E L    EM+ +G   D VT+  +
Sbjct: 127 CGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGV 186

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK------ 470
           +S+ + L + D+G+++H Y+  +G+     + + L+DMY K G +++AR++F+       
Sbjct: 187 VSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTM 246

Query: 471 --------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                   ++  D+D   WNAMI GY      +EA   F +M   N+ P+ VT+ S L A
Sbjct: 247 VSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSA 306

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C+ +G +++G  +H +  ++ L  NV +GT+LIDMY+K G I  A  VF ++P +NS+T+
Sbjct: 307 CSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTW 366

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           T +I G   HG +  A++ F  M    + PD +TF+ +LSAC + GLV+EG + F  M  
Sbjct: 367 TAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSS 426

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ + P  +HY C+ D+LGR G + EA E +K +  E + + +WG+L  +CR+HG+  + 
Sbjct: 427 KFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAV-VWGALFFACRIHGNVLMG 485

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E  A KLL+MD  +S  G +VLL+N+Y E   W+   K RK MR+RG+ K  GCS I+V 
Sbjct: 486 ERAASKLLQMDPHDS--GIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVN 543

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G V  F  +D+ HPQS +IYE L +L  ++
Sbjct: 544 GIVYEFIVRDKSHPQSEQIYECLIQLTRQL 573



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 231/477 (48%), Gaps = 48/477 (10%)

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFV 230
           ++   D    +    R  N  +WN  +  ++ +E   EAV  ++ +L+  G +P   ++ 
Sbjct: 24  EWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYP 83

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +F A + L   +    + G ++ LG  + +D+FV+++ I +    G  D ARK+FD   
Sbjct: 84  LLFKACARLSLIRMGSEILGHVLHLG--FDSDIFVSNAVIHLLVSCGDLDGARKMFDKSC 141

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   WN+MI GYV+     EA+  F + ++++ I  D+VT +  +S+ +QL++LDLG+
Sbjct: 142 VRDLVSWNSMINGYVRRGWAYEALN-FYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGR 200

Query: 351 QLHAYIIKNFVALPVIVLNAVI------------------------------------ER 374
           + H YI +N + L V + NA++                                    ++
Sbjct: 201 ESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDK 260

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DVV WN MI  +V      E L L  EMQ      D VT+ + LSA S L   DVG   H
Sbjct: 261 DVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIH 320

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            Y+ +H +     + + LIDMYAK G I  A Q+F++     R+  TW A+I+G   +G 
Sbjct: 321 HYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPG--RNSLTWTAIISGLALHGN 378

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGT 552
              A   F +M++++V P+ VT   +L AC   G +E G++     S ++ L   +   +
Sbjct: 379 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYS 438

Query: 553 SLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG---MSERALSLFRSM 605
            ++D+  ++G++  A  +   +P E ++V +  +      HG   M ERA S    M
Sbjct: 439 CMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQM 495



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 221/489 (45%), Gaps = 78/489 (15%)

Query: 68  PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           P T  WN  I GF+ +  P EA++LY ++ +    T  DNYTY  + KACA    +R+G 
Sbjct: 41  PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDG-TKPDNYTYPLLFKACARLSLIRMGS 99

Query: 128 AVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR 187
            +  H +    +   FV N+++++  +C                     D   K+FD   
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSC------------------GDLDGARKMFDKSC 141

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            R++V+WN++++ YV+     EA+  +R M   GI+P  ++ + V  + + L D      
Sbjct: 142 VRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE 201

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL----------------E 291
            +  + + G +    L  A++ + MY + G  + ARK+FD+                  +
Sbjct: 202 SHCYIEENGLKLTVPL--ANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPD 259

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++   WN MIGGYV  N   EA+ LF ++  ++ I  D+VT +S LSA SQL  LD+G  
Sbjct: 260 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQLGALDVGIW 318

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H YI K+ ++L V +  A+I+                    R+ ++W  +IS    +G 
Sbjct: 319 IHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 378

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL---------LRHGI 442
               +    EM     M D VT   LLSA  +    + G++  + +         L+H  
Sbjct: 379 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKH-- 436

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG---LLEEAFV 499
                 S ++D+  ++GL++ A ++  K+   + D   W A+      +G   + E A  
Sbjct: 437 -----YSCMVDLLGRAGLLEEAEELI-KSMPIEADAVVWGALFFACRIHGNVLMGERAAS 490

Query: 500 AFRQMLEHN 508
              QM  H+
Sbjct: 491 KLLQMDPHD 499



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 20/407 (4%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD       V WN++I G+V     YEA+  Y +MK        D  T   V+ +C
Sbjct: 133 ARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEG--IKPDEVTMIGVVSSC 190

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+  +L +G+  HC+        +  + N+L++MY  C +   A    L     + +   
Sbjct: 191 AQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARK--LFDSMTNKTMVS 248

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  ++VV WN ++  YV   R  EA+  F  M  M I P  ++ V+   A S
Sbjct: 249 WTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACS 308

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K   E   ++ + ++ I MYA+ G    A ++F     RN+  W
Sbjct: 309 QLGALDVGIWIHHYIEK--HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTW 366

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             +I G   + +   AI  F ++++ + ++ D+VTFL  LSA      ++ G++  + + 
Sbjct: 367 TAIISGLALHGNAHGAIAYFSEMID-NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMS 425

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
             F   P           +  ++ M+    + GL +E   L+  M  +    D+V   AL
Sbjct: 426 SKFNLSP----------KLKHYSCMVDLLGRAGLLEEAEELIKSMPIEA---DAVVWGAL 472

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
             A     N  +G++  + LL+   H  G+   L +MY ++ + K A
Sbjct: 473 FFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 519



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 47/244 (19%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPT----------------TVIWNTIIIG 79
           KL  P   + +    + G    AR+LFDS+T  T                 V WN +I G
Sbjct: 212 KLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGG 271

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +V  N   EA+ L+++M+  +   + D  T  S L AC++   L +G  +H +  +   +
Sbjct: 272 YVHANRGKEALALFNEMQAMN--INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS 329

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            +  +  +L++MY+ C                   K     +VF  +  RN + W  I+S
Sbjct: 330 LNVALGTALIDMYAKC------------------GKITKAIQVFQELPGRNSLTWTAIIS 371

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
                     A+  F  M+   + P  ++F+ +  A             +G LV+ G +Y
Sbjct: 372 GLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSA-----------CCHGGLVEEGRKY 420

Query: 260 VNDL 263
            + +
Sbjct: 421 FSQM 424


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 203/602 (33%), Positives = 337/602 (55%), Gaps = 31/602 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STISFVNVFPALSSLG 240
           +FD +R  ++ +W  ++ WY   + Y E V+ +   LR  +     + F  V  A S L 
Sbjct: 93  MFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELR 152

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      ++  +VK+GS    D FV +  + MYA+    + +R++FD  L+RN   W +M
Sbjct: 153 ETDEGRKLHCQIVKVGSP---DSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSM 209

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           I GYVQN+   E + LF ++ E   +  +  T  S ++A ++L  L  G+ +H Y+IK+ 
Sbjct: 210 IVGYVQNDCLKEGLVLFNRMRE-GLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSG 268

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                F+  P++              V + +   D+VSW  MI  + Q G   E L L  
Sbjct: 269 FDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFT 328

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL 460
           + + +  + ++VT +++LSA +   + ++G+  H   ++ G      E+ L+DMYAK  +
Sbjct: 329 DERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHM 388

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           I  AR +FE     D+D   WN++I+GYTQNG   EA   F QM   +V P+ +T+ SVL
Sbjct: 389 IGDARYVFET--VFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVL 446

Query: 521 PACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
            AC  +G   +G  LHG++I+  LL  +V+VGT+L++ Y+K G    A  +F ++ EKN+
Sbjct: 447 SACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNT 506

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           +T++ MI GYG  G   R+L LF  M    +EP+ + F  +LSACS++G++ EG + F+ 
Sbjct: 507 ITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNT 566

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M Q Y   PS +HY C+ D+L R G++ EA +F++++  + +V  + G+ L  CRLH   
Sbjct: 567 MCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDV-SLLGAFLHGCRLHSRF 625

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L EV  +++LE+    +   Y+VL+SN+YA EG W   ++V + M++RGL K  G S +
Sbjct: 626 DLGEVAVRRMLELHPDKAC--YYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLV 683

Query: 760 DV 761
           D+
Sbjct: 684 DI 685



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 163/619 (26%), Positives = 285/619 (46%), Gaps = 59/619 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR +FD I  P    W  +I  +  N+  Y  I+ +   +        DN  +S 
Sbjct: 85  GHVECARLMFDRIRNPDLYSWKVMIRWYFLND-SYSEIVQFYNTRLRKCLNEYDNVVFSI 143

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC+E R    G+ +HC  ++   +P  FV   L++MY+ C              EV+
Sbjct: 144 VLKACSELRETDEGRKLHCQIVK-VGSPDSFVLTGLVDMYAKCR-------------EVE 189

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S+     +VFD +  RNVV W +++  YV+ +   E +  F  M    +  +  +  ++
Sbjct: 190 DSR-----RVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSL 244

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + LG       V+G ++K G +   + F+ +  + +Y + G    A  +FD     
Sbjct: 245 VTACTKLGALHQGKWVHGYVIKSGFDL--NSFLVTPLLDLYFKCGDIRDAFSVFDELSTI 302

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  MI GY Q  +P EA++LF       +++ + VT  S LSA +Q   L++G+ +
Sbjct: 303 DLVSWTAMIVGYAQRGYPREALKLFTDE-RWKDLLPNTVTTSSVLSACAQTGSLNMGRSV 361

Query: 353 HAYIIK-------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           H   IK                   + +     V   V ++DV++WN++IS + QNG   
Sbjct: 362 HCLGIKLGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAY 421

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESY 450
           E L L  +M+      D++T+ ++LSA +++    VG   H Y ++ G+   G   + + 
Sbjct: 422 EALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGL-LSGSVYVGTA 480

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L++ YAK G  ++AR IF+  + G+++  TW+AMI GY   G    +   F  ML+  + 
Sbjct: 481 LLNFYAKCGDAESARVIFD--EMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLE 538

Query: 511 PNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN V   ++L AC+  G +  G +  +     Y    ++     ++D+ +++G +  A +
Sbjct: 539 PNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALD 598

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGM---SERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
              KIP +  V+    +LG   HG    S   L      +   + PD   +  ++S   Y
Sbjct: 599 FIEKIPIQPDVS----LLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNL-Y 653

Query: 627 A--GLVDEGLQIFDLMQQE 643
           A  G   +  Q+ +LM+Q 
Sbjct: 654 ASEGRWSQANQVMELMKQR 672



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 236/491 (48%), Gaps = 33/491 (6%)

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            S + +   +SSL    +  VV+GL     SE   DL   +  + +Y   G  + AR +F
Sbjct: 43  FSLLGICKTVSSLRKIHALLVVHGL-----SE---DLLCETKLVSLYGSFGHVECARLMF 94

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D     +   W  MI  Y  N+   E ++ +   L      +D+V F   L A S+L+E 
Sbjct: 95  DRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRET 154

Query: 347 DLGQQLHAYIIK-----NFVALPVI--------------VLNAVIERDVVSWNTMISAFV 387
           D G++LH  I+K     +FV   ++              V + +++R+VV W +MI  +V
Sbjct: 155 DEGRKLHCQIVKVGSPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYV 214

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           QN    EGL+L   M++     +  T+ +L++A + L     GK  H Y+++ G      
Sbjct: 215 QNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSF 274

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L+D+Y K G I+ A  +F++  +   D  +W AMI GY Q G   EA   F     
Sbjct: 275 LVTPLLDLYFKCGDIRDAFSVFDELST--IDLVSWTAMIVGYAQRGYPREALKLFTDERW 332

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            ++ PN VT +SVL AC   G++ +G+ +H   I+ L  ++     +L+DMY+K  +I  
Sbjct: 333 KDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIK-LGSEDATFENALVDMYAKCHMIGD 391

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF  + +K+ + + ++I GY Q+G +  AL LF  M+   + PDAIT V+VLSAC+ 
Sbjct: 392 ARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACAS 451

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            G    G  +     +   +  S      + +   + G    A     E+GE+  +   W
Sbjct: 452 VGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTI--TW 509

Query: 687 GSLLGSCRLHG 697
            +++G   + G
Sbjct: 510 SAMIGGYGIQG 520


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 226/773 (29%), Positives = 403/773 (52%), Gaps = 67/773 (8%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
            F+ +     V WN+++ G++ N    ++I ++  M ++   T  D  T++ +LK C+  
Sbjct: 94  FFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAG--TEFDGRTFAIILKVCSCL 151

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            +  +G  +H   +R   +      ++LL+MY+           G ++VE          
Sbjct: 152 EDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAK----------GKRFVES--------L 193

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF  +  +N V+W+ I++  V+      A++ F+ M ++    S   + +V  + ++L 
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +    ++   +K  S++  D  V ++ + MYA+      A+ +FD     N + +N M
Sbjct: 254 ELRLGGQLHAHALK--SDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAM 311

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY Q  H  +A+ LF +++    + FD+++      A + ++ L  G Q++   IK+ 
Sbjct: 312 ITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSS 370

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           ++L V V NA I+                    RD VSWN +I+A  QNG   E L L  
Sbjct: 371 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 430

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSG 459
            M +     D  T  ++L A +   +   G + H+ +++ G+     +   LIDMY+K G
Sbjct: 431 SMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 489

Query: 460 LIKTARQIFEK-----NDSGDRDQ-------------ATWNAMIAGYTQNGLLEEAFVAF 501
           +I+ A +I  +     N SG  ++              +WN++I+GY      E+A + F
Sbjct: 490 MIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 549

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M+E  +TP+  T A+VL  C  + +  LGKQ+H   I+  L  +V++ ++L+DMYSK 
Sbjct: 550 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKC 609

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ +  +F K   ++ VT+  MI GY  HG  E A+ LF  M    I+P+ +TF+++L
Sbjct: 610 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISIL 669

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
            AC++ GL+D+GL+ F +M+++Y + P   HY  + D+LG+ GKV  A E ++E+  E +
Sbjct: 670 RACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEAD 729

Query: 682 VLEIWGSLLGSCRLHGHS-ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
            + IW +LLG C +H ++ E+AE     LL +D ++S    + LLSN+YA+ G WE V  
Sbjct: 730 DV-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA--YTLLSNVYADAGMWEKVSD 786

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           +R+ MR   L+KE GCSW+++   ++ F   D+ HP+  +IYE L  +  EM+
Sbjct: 787 LRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 839



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 263/570 (46%), Gaps = 69/570 (12%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F  I    +V W+ II G V NNL   A+  + +M+K +   S     Y+SVL++CA 
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVS--QSIYASVLRSCAA 251

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              LR+G  +H H ++        V  + L+MY+ C +  DA++                
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI---------------- 295

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +FD     N  ++N +++ Y + E   +A+  F  ++  G+    IS   VF A + +
Sbjct: 296 --LFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALV 353

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   +Y L +K  S    D+ VA++AI MY +      A ++FD    R+   WN 
Sbjct: 354 KGLSEGLQIYDLAIK--SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 411

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I  + QN    E + LFV +L    I  D+ TF S L A +    L  G ++H+ I+K+
Sbjct: 412 IIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKS 469

Query: 360 FVALPVIV----------------------------------------LNAVIERDVVSW 379
            +A    V                                         N  ++   VSW
Sbjct: 470 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSW 529

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N++IS +V     ++  ML   M + G   D  T   +L   +NL +  +GKQ HA +++
Sbjct: 530 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 589

Query: 440 HGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
             +  +  + S L+DMY+K G +  +R +FEK  S  RD  TWNAMI GY  +G  EEA 
Sbjct: 590 KELQSDVYISSTLVDMYSKCGDLHDSRLMFEK--SLRRDFVTWNAMICGYAHHGKGEEAI 647

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDM 557
             F +M+  N+ PN VT  S+L AC  MG I+ G +      R Y LD  +   ++++D+
Sbjct: 648 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDI 707

Query: 558 YSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
             KSG +  A  +  ++P E + V + T++
Sbjct: 708 LGKSGKVKRALELIREMPFEADDVIWRTLL 737



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 171/652 (26%), Positives = 300/652 (46%), Gaps = 68/652 (10%)

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD---- 172
           CA+   L +GK  H H I     P+ FV N LL +Y+     + A MV  +    D    
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 173 ------YSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                 Y+K + + K    F+ M  R+VV+WN+++S Y++    ++++  F  M R G  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
               +F  +    S L D      ++G++V++G +   D+  AS+ + MYA+   F  + 
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCD--TDVVAASALLDMYAKGKRFVESL 193

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F    E+N+  W+ +I G VQNN    A++ F ++ +++  V   + + S L + + L
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAAL 252

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMI 383
            EL LG QLHA+ +K+  A   IV  A ++                     +  S+N MI
Sbjct: 253 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMI 312

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + Q     + L+L + +   G   D ++++ +  A + ++    G Q +   ++  + 
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLS 372

Query: 444 FE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + +  IDMY K   +  A ++F++     RD  +WNA+IA + QNG   E    F 
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRR--RDAVSWNAIIAAHEQNGKGYETLFLFV 430

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            ML   + P+  T  SVL AC   G++  G ++H   ++  +  N  VG SLIDMYSK G
Sbjct: 431 SMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 489

Query: 563 VINYAANVFAKIPEKNS--------------------VTYTTMILGYGQHGMSERALSLF 602
           +I  A  + ++  ++ +                    V++ ++I GY     SE A  LF
Sbjct: 490 MIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLF 549

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLG 661
             M   GI PD  T+  VL  C+       G QI   ++++E  +Q        + DM  
Sbjct: 550 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYS 607

Query: 662 RVGKVVEA-YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVVAKKLLE 711
           + G + ++   F K L  +      W +++     HG  E A ++  + +LE
Sbjct: 608 KCGDLHDSRLMFEKSLRRD---FVTWNAMICGYAHHGKGEEAIQLFERMILE 656



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 196/407 (48%), Gaps = 24/407 (5%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD + R   V WN II     N   YE + L+  M +S      D +T+ SVLKAC
Sbjct: 394 AFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR--IEPDEFTFGSVLKAC 451

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE---VDYS 174
               +L  G  +H   ++     +  V  SL++MYS C    +AE +  ++ +   V  +
Sbjct: 452 TGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGT 510

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
             +L  K+ +   +   V+WN+I+S YV  E+  +A   F  M+ MGI P   ++  V  
Sbjct: 511 MEELE-KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 569

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             ++L        ++  ++K   E  +D++++S+ + MY++ G    +R +F+  L R+ 
Sbjct: 570 TCANLASAGLGKQIHAQVIK--KELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI GY  +    EAI+LF +++ L+ I  + VTF+S L A + +  +D G + + 
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLE-YF 685

Query: 355 YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
           Y++K    L         +  +  ++ M+    ++G     L L+ EM    F  D V  
Sbjct: 686 YMMKRDYGL---------DPQLPHYSNMVDILGKSGKVKRALELIREMP---FEADDVIW 733

Query: 415 TALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL 460
             LL   +  RN  +V ++  A LLR         + L ++YA +G+
Sbjct: 734 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGM 780



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 204/468 (43%), Gaps = 83/468 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LFD         +N +I G+      ++A+LL+ ++  S      D  + S V +AC
Sbjct: 293 AQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG--LGFDEISLSGVFRAC 350

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  + L  G  ++   I+   +    V N+ ++MY  C +  +A                
Sbjct: 351 ALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEA---------------- 394

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD MRRR+ V+WN I++ + +  +  E +  F  MLR  I P   +F +V  A +
Sbjct: 395 --FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT 452

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV- 296
             G       ++  +VK G    ++  V  S I MY++ G  + A KI     +R T V 
Sbjct: 453 G-GSLGYGMEIHSSIVKSG--MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR-TNVS 508

Query: 297 --------------------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
                               WN++I GYV      +A  LF +++E+  I  D  T+ + 
Sbjct: 509 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATV 567

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDV 376
           L   + L    LG+Q+HA +IK  +   V + + +++                    RD 
Sbjct: 568 LDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDF 627

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+WN MI  +  +G  +E + L   M  +    + VT  ++L A +++   D G + + Y
Sbjct: 628 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE-YFY 686

Query: 437 LLR--HGI-----HFEGMESYLIDMYAKSGLIKTARQI-----FEKND 472
           +++  +G+     H+  M    +D+  KSG +K A ++     FE +D
Sbjct: 687 MMKRDYGLDPQLPHYSNM----VDILGKSGKVKRALELIREMPFEADD 730


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 232/734 (31%), Positives = 384/734 (52%), Gaps = 57/734 (7%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA++++  +++ S     + +  +SV++AC +   +  G  +H   +R   +   +V  S
Sbjct: 19  EALMVFVDLQRKSG-EHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L++ YS    + B E+  L               VFD +  +  V W TI++ Y K  R 
Sbjct: 78  LIDFYS---KNGBIEVARL---------------VFDQLLEKTAVTWTTIIAGYTKCGRS 119

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
             ++  F  M    + P      +V  A S L   +    ++  +++ G+E   D+ V +
Sbjct: 120 XVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM--DVSVVN 177

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
             I  Y +       RK+FD  + +N   W TMI GY+QN+   EA++LF    E++ + 
Sbjct: 178 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG---EMNRLG 234

Query: 328 F--DDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------------- 366
           +  D     S L++   L+ L+ G+Q+HAY IK       FV   +I             
Sbjct: 235 WKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAK 294

Query: 367 -VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V + + E++V+S+N MI  +       E L L +EM+ + F    +T  +LL  +++L 
Sbjct: 295 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLF 354

Query: 426 NQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
             ++ KQ H  +++ G+    F G  S LID+Y+K   +K AR +FE+ +  ++D   WN
Sbjct: 355 ALELSKQIHGLIIKXGVSLDLFAG--SALIDVYSKCSYVKDARHVFEEMN--EKDIVVWN 410

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           AM  GYTQ+   EEA   +  +      PN  T A+++ A + + ++  G+Q H   ++ 
Sbjct: 411 AMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM 470

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD   FV  +L+DMY+K G I  A  +F     ++ V + +MI  + QHG +E AL +F
Sbjct: 471 GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMF 530

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
           R M   GI+P+ +TFVAVLSACS+AG V++GL  F+ M   + I+P TEHY CV  +LGR
Sbjct: 531 REMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGR 589

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            GK+ EA EF++++  E   + +W SLL +CR+ G+ EL +  A+  +  D ++S  G +
Sbjct: 590 SGKLFEAKEFIEKMPIEPAAI-VWRSLLSACRIAGNVELGKYAAEMAISTDPKDS--GSY 646

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           +LLSNI+A +G W +V KVR  M    + KE G SWI+V   VN F ++   H ++  I 
Sbjct: 647 ILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIG 706

Query: 783 EMLERLAMEMRNAG 796
            +L+ L   ++ AG
Sbjct: 707 SVLDILIQHIKGAG 720



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 180/610 (29%), Positives = 287/610 (47%), Gaps = 92/610 (15%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G   +AR +FD +   T V W TII G+        ++ L++QM++++     D Y  
Sbjct: 84  KNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP--DRYVV 141

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SSVL AC+    L  GK +H + +R  +     V N L++ Y+ C               
Sbjct: 142 SSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKC--------------- 186

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              ++     K+FD M  +N+++W T++S Y++     EA++ F  M R+G +P   +  
Sbjct: 187 ---NRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACT 243

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  +  SL   +    V+   +K   E  ++ FV +  I MYA+      A+K+FD   
Sbjct: 244 SVLTSCGSLEALEQGRQVHAYTIKANLE--SNEFVKNGLIDMYAKSNLLXDAKKVFDVMA 301

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDL 348
           E+N   +N MI GY       EA+ELF    E+   +F    +TF+S L   + L  L+L
Sbjct: 302 EQNVISYNAMIEGYSSQEKLSEALELF---HEMRVRLFPPSLLTFVSLLGVSASLFALEL 358

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
            +Q+H  IIK  V+L +   +A+I                    E+D+V WN M   + Q
Sbjct: 359 SKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 418

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGM 447
           +  ++E L L   +Q      +  T  AL++AASNL +   G+Q H  L++ G+ F   +
Sbjct: 419 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 478

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+DMYAK G I+ AR++F  N S  RD   WN+MI+ + Q+G  EEA   FR+M++ 
Sbjct: 479 TNALVDMYAKCGSIEEARKMF--NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 536

Query: 508 NVTPNVVTIASVLPACNPMGNIELG----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
            + PN VT  +VL AC+  G +E G      + GF I+   +    V    + +  +SG 
Sbjct: 537 GIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACV----VSLLGRSGK 592

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A     K+P                                  IEP AI + ++LSA
Sbjct: 593 LFEAKEFIEKMP----------------------------------IEPAAIVWRSLLSA 618

Query: 624 CSYAGLVDEG 633
           C  AG V+ G
Sbjct: 619 CRIAGNVELG 628



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 258/603 (42%), Gaps = 99/603 (16%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R    R+LFD +     + W T+I G++ N+  +EA+ L+ +M +       D +  +SV
Sbjct: 188 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLG--WKPDGFACTSV 245

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L +C     L  G+ VH + I+     + FV N L++MY+      DA+           
Sbjct: 246 LTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAK----------- 294

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVFD M  +NV+++N ++  Y   E+  EA+  F  M      PS ++FV++ 
Sbjct: 295 -------KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 347

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +SL   + +  ++GL++K G     DLF  S+ I +Y++      AR +F+   E++
Sbjct: 348 GVSASLFALELSKQIHGLIIKXGVSL--DLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 405

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
             VWN M  GY Q+    EA++L+   L+      ++ TF + ++A S L  L  GQQ H
Sbjct: 406 IVVWNAMFFGYTQHLENEEALKLY-STLQFSRQKPNEFTFAALITAASNLASLRHGQQFH 464

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
             ++K  +     V NA+++                    RDVV WN+MIS   Q+G  +
Sbjct: 465 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAE 524

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--L 451
           E L +  EM K+G   + VT  A+LSA S+    + G      +   GI   G E Y  +
Sbjct: 525 EALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIK-PGTEHYACV 583

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +  +SG +  A++  EK                                      + P
Sbjct: 584 VSLLGRSGKLFEAKEFIEK------------------------------------MPIEP 607

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSI--------RYLLDQNVFVGTSLI-------D 556
             +   S+L AC   GN+ELGK     +I         Y+L  N+F    +        D
Sbjct: 608 AAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRD 667

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS-LFRSMKGCGIEPDAI 615
               S V+      + ++  K +V +      + +  M    L  L + +KG G  PDA 
Sbjct: 668 RMDSSEVVKEPGRSWIEVNNKVNV-FIARXTTHREADMIGSVLDILIQHIKGAGYVPDAT 726

Query: 616 TFV 618
             +
Sbjct: 727 ALL 729


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 209/633 (33%), Positives = 335/633 (52%), Gaps = 34/633 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIR--PSTISFVNVFPALS 237
           ++FD M +++ ++W T++S YV      EA+  F+ M +  G+R  P  +S  +    L+
Sbjct: 70  RMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLN 129

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S  D    ++++G  VK G   VN +FV S+ + MY + G     R++F     RN   W
Sbjct: 130 S--DVNYGELLHGYAVKTG--LVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             +I G V+  +  EA+  F ++     + +D  TF  AL A +    L+ G+++HA  +
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWR-SRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K    +   V N +                      RDVVSW T+I+  VQ G ++  + 
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
               M++     +  T  A++S  +NL   + G+Q HA +L  G+     +E+ ++ MYA
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G + ++  IF  ++   RD  +W+ +IAGY Q G + EAF     M      P    +
Sbjct: 365 KCGQLTSSSVIF--HEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFAL 422

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL AC  M  +E GKQLH + +   L+    V ++LI+MY K G I  A+ +F     
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            + V++T MI GY +HG S   + LF  +   G+ PD++TF+ VLSACS+AGLVD G   
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHY 542

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M ++Y+I PS EHY C+ D+L R G++ +A   ++ +    + + +W +LL +CR+H
Sbjct: 543 FNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDV-VWSTLLRACRVH 601

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G  E     A+++L+++   +  G H+ L+NIYA +G W     +RK M+ +G+ KE G 
Sbjct: 602 GDVERGRRTAERILQLEP--NCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGW 659

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           SWI V   V  F + D+ HPQ   IY ML+ LA
Sbjct: 660 SWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLA 692



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 302/651 (46%), Gaps = 50/651 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           I +   P    +L ++ + G    AR++FD +++   + W T+I G+V  N   EA+LL+
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M+  S     D +  S   KAC    ++  G+ +H + ++     S FV ++LL+MY+
Sbjct: 104 KNMRVESGL-RIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYT 162

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                 +                    +VF  M  RNVV+W  I++  V+     EA+  
Sbjct: 163 KNGKIFEGR------------------RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVY 204

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M R  +   + +F     A +  G       ++   +K G +  +  FVA++   MY
Sbjct: 205 FSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS--FVANTLATMY 262

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            + G  ++   +F+    R+   W T+I   VQ      A++ F+++ E D +  ++ TF
Sbjct: 263 NKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD-VSPNEYTF 321

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------E 373
            + +S  + L  ++ G+QLHA I+   +A  + V N+++                     
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD+VSW+T+I+ + Q G   E   L+  M+ +G       + ++LSA  N+   + GKQ 
Sbjct: 382 RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 434 HAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           HAY+L  G+    M  S LI+MY K G I+ A +IF+  +  + D  +W AMI GY ++G
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAE--NDDIVSWTAMINGYAEHG 499

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVG 551
              E    F ++    + P+ VT   VL AC+  G ++LG    +  S +Y +  +    
Sbjct: 500 YSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHY 559

Query: 552 TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +ID+  ++G ++ A ++   +P  ++ V ++T++     HG  ER       +    +
Sbjct: 560 GCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERI--LQL 617

Query: 611 EPD-AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           EP+ A T + + +  +  G   E   I  LM+ +  I+     +  V D++
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLV 668



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 202/443 (45%), Gaps = 34/443 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD   +++   W T+I GYV  N   EA+ LF  +     +  D      A  A  
Sbjct: 68  ARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACG 127

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
              +++ G+ LH Y +K  +   V V +A+++                    R+VVSW  
Sbjct: 128 LNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTA 187

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+  V+ G + E L+   EM +     DS T    L A ++    + G++ HA  ++ G
Sbjct: 188 IITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
                 + + L  MY K G ++    +FEK     RD  +W  +I    Q G  E A  A
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSM--RDVVSWTTIITTLVQMGQEECAVQA 305

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M E +V+PN  T A+V+  C  +  IE G+QLH   +   L  ++ V  S++ MY+K
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  ++ +F ++  ++ V+++T+I GY Q G    A  L   M+  G +P      +V
Sbjct: 366 CGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASV 425

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKVVEAYEFVKEL 676
           LSAC    +++ G Q+       Y +    EH   V     +M  + G + EA       
Sbjct: 426 LSACGNMAILEHGKQL-----HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFD-- 478

Query: 677 GEEGNVLEIWGSLLGSCRLHGHS 699
             E + +  W +++     HG+S
Sbjct: 479 AAENDDIVSWTAMINGYAEHGYS 501


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 226/724 (31%), Positives = 380/724 (52%), Gaps = 50/724 (6%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           E +  Y ++KK+   T  D   +  +LKA +   + R GK++H   I+   +    + NS
Sbjct: 30  EVVSHYHEIKKAGIQT-VDVSVFPPILKAWSFLSH-RHGKSLHACLIKQGFDSFTSIGNS 87

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTER 206
           ++  Y  C                    +D+   VF++MRR R+ V+WN ++  ++    
Sbjct: 88  IMGFYIRC------------------GDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGA 129

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
            V  +  F      G  P+  + V V  A   LG      +++G L+K G   ++ +  +
Sbjct: 130 LVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNS 189

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
             ++++ A++ C   AR++FD   E++   W+ MIGGY+Q   P   +++F +++ +  I
Sbjct: 190 LLSMYVDADMEC---ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGI 246

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI-------------- 366
             D V  +S L A +  +++  G+ +H  +I        FV   +I              
Sbjct: 247 EPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFK 306

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V N + +R+ VSWN+M+S FV N    E   L+  M+K+    D VT+  +L       +
Sbjct: 307 VFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVH 366

Query: 427 QDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               K  H  ++R G    E + S LID YAK  LI+ A ++F +     RD  +W+ MI
Sbjct: 367 PFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRR--RDVVSWSTMI 424

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +G+   G  +EA   +++M    V PNV+TI ++L AC+    ++  K  HG +IR    
Sbjct: 425 SGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFA 484

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             V VGT+++DMYSK G I  +   F ++  KN VT++ MI  YG +G++  AL+LF  M
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           K  G++P+ +T ++VL+ACS+ GLV+EGL +F  M QE  ++P  EHY C+ DMLGR GK
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604

Query: 666 VVEAYEFVKELGEE-GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  A E +K +     N   IWGSLL +CR +G +EL +    ++LE++  NS  GY ++
Sbjct: 605 LDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNS-AGY-LV 662

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
            S++YA +G W++  ++R   +E+G++   G S + +     RF + D  HP+S +I+ M
Sbjct: 663 ASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPRSDEIFSM 722

Query: 785 LERL 788
            ++L
Sbjct: 723 AQQL 726



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 219/472 (46%), Gaps = 45/472 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     + W+ +I G++    P   + ++ +M    P    D     SVLKAC
Sbjct: 202 ARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL-VPGIEPDGVVMVSVLKAC 260

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A +R++  G+ VH   I    +   FV NSL++MYS C  +  A                
Sbjct: 261 ASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA---------------- 304

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVF+ + +RN V+WN+++S +V  E Y EA      M +  +    ++ VN+     
Sbjct: 305 --FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                     ++ ++++ GSE  N+L V S+ I  YA+    + A ++F     R+   W
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSE-ANEL-VLSALIDAYAKCYLIEIAWEVFARMRRRDVVSW 420

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           +TMI G+     P EAI ++ Q ++ D +  + +T ++ L A S   EL   +  H   I
Sbjct: 421 STMISGFAHCGKPDEAIAVY-QEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAI 479

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +   A  V V  AV++                    +++V+W+ MI+A+  NGL  E L 
Sbjct: 480 RQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALA 539

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMY 455
           L  EM++ G   + VT  ++L+A S+    + G      +++      G E Y  ++DM 
Sbjct: 540 LFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDML 599

Query: 456 AKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++G + TA ++ +      ++ A+ W ++++     GL E    A  ++LE
Sbjct: 600 GRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLE 651



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 195/415 (46%), Gaps = 44/415 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ I++   V WN+++ GFV N    EA  L S M+K    T  D  T  ++L+ C
Sbjct: 304 AFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVET--DEVTLVNILQIC 361

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +    K++HC  IR  S  +  V ++L++ Y+ C             +E+ +    
Sbjct: 362 KYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCY-----------LIEIAW---- 406

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  MRRR+VV+W+T++S +    +  EA+  ++ M R  ++P+ I+ +N+  A S
Sbjct: 407 ---EVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACS 463

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              + K +   +G+ ++ G  + +++ V ++ + MY++ G    +R+ FD    +N   W
Sbjct: 464 VTAELKRSKWAHGVAIRQG--FASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTW 521

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + MI  Y  N    EA+ LF + ++   +  + VT LS L+A S    ++ G  L   ++
Sbjct: 522 SAMIAAYGMNGLAHEALALFAE-MKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMV 580

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ---KQGFMIDSVTV 414
           +             +E     ++ M+    + G  D  + ++  M    K G  I     
Sbjct: 581 QEL----------GLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNLKNGASI----W 626

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
            +LLSA  +    ++GK+  + +L   +       YL+   MYA  GL   A +I
Sbjct: 627 GSLLSACRSYGLTELGKEAISRVLE--LEPSNSAGYLVASSMYAADGLWDDAARI 679



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 139/316 (43%), Gaps = 9/316 (2%)

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           +W   I     NG   E +   +E++K G     V+V   +  A +  +   GK  HA L
Sbjct: 14  NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL 73

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   F  + + ++  Y + G    A  +F       RD  +WN +I G+  NG L  
Sbjct: 74  IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRR-SRDSVSWNILIHGHLDNGALVA 132

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
               F         PN+ T+  V+ AC  +G    G  LHG+ I+        V  SL+ 
Sbjct: 133 GLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLS 192

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC-GIEPDAI 615
           MY  +  +  A  +F ++ EK+ + ++ MI GY Q    +  L +FR M    GIEPD +
Sbjct: 193 MYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGV 251

Query: 616 TFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
             V+VL AC+ +  V  G  +  L + + +      E+   + DM  +      A++   
Sbjct: 252 VMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVEN--SLIDMYSKCKDAGSAFKVFN 309

Query: 675 ELGEEGNVLEIWGSLL 690
           E+ +  NV   W S+L
Sbjct: 310 EISQRNNV--SWNSML 323



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 26/272 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +A ++F  + R   V W+T+I GF     P EAI +Y +M +       +  T  ++L+A
Sbjct: 404 IAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRD--LVKPNVITIINLLEA 461

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+ T  L+  K  H   IR        V  ++++MYS C   L +               
Sbjct: 462 CSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASR-------------- 507

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               + FD +  +N+V W+ +++ Y       EA+  F  M R G++P+ ++ ++V  A 
Sbjct: 508 ----RAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAAC 563

Query: 237 SSLGDYKSADVVYGLLVK-LGSEYVNDLFVASSAIFMYAELGCFDFARKIFD---NCLER 292
           S  G  +    ++  +V+ LG E   + +  S  + M    G  D A ++     + L+ 
Sbjct: 564 SHGGLVEEGLSLFKSMVQELGLEPGFEHY--SCMVDMLGRAGKLDTAIEVIKAMPHNLKN 621

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
              +W +++             E   +VLEL+
Sbjct: 622 GASIWGSLLSACRSYGLTELGKEAISRVLELE 653


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/640 (32%), Positives = 347/640 (54%), Gaps = 94/640 (14%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG-- 302
           A +V+  ++K  +++ +++F+ +  + +Y + G  + ARK+FD+  +RNT  WN ++G  
Sbjct: 38  ARLVHARIIK--TQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGAL 95

Query: 303 -----------------------------GYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
                                        G+ Q +   EA+  FV  +  ++ V ++ +F
Sbjct: 96  TKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR-FVVDMHSEDFVLNEYSF 154

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
            SALSA + L +L +G Q+H  I K+  +L V + +A+++                    
Sbjct: 155 GSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDV 214

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           R++VSWN++I+ + QNG   + L +   M   G   D +T+ ++ SA ++L     G Q 
Sbjct: 215 RNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQI 274

Query: 434 HAYLLRHGIHFEGM--ESYLIDMYAKSGLIKTARQIFEK--------------------- 470
           HA +++H  +   +   + L+DMYAK   +  AR +F++                     
Sbjct: 275 HARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASS 334

Query: 471 --------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                   ++  +R+  +WNA+IAGYTQNG  EEA   F  +   ++ P   T  ++L A
Sbjct: 335 VKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNA 394

Query: 523 CNPMGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           C  + +++LG+Q H      GF  +   D ++FVG SLIDMY K G++     VF ++ E
Sbjct: 395 CANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLE 454

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +++V++  MI+GY Q+G    AL +FR M   G  PD +T + VLSACS+AGLV+EG   
Sbjct: 455 RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCY 514

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  E+ + P  +HY C+ D+LGR G + EA   ++ +  E + + +WGSLL +C++H
Sbjct: 515 FQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAV-VWGSLLAACKVH 573

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+  L + VA++LLE+D  NS P  +VLLSN+YAE G W++V +VRK+MR+ G+ K+ GC
Sbjct: 574 GNITLGKYVAERLLEIDPLNSGP--YVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGC 631

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI +  +++ F  KD+ HP    IY +L+ L  +M+  G
Sbjct: 632 SWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVG 671



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 168/648 (25%), Positives = 298/648 (45%), Gaps = 117/648 (18%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV- 164
           D+  ++ +L  C +++++   + VH   I+   +   F+ N L+++Y  C    DA  V 
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 165 ------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                        +      +   D    +F  M  R+  +WN +VS + + +R+ EA+R
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
               M       +  SF +   A + L D      ++GL+ K  S Y  D+++ S+ + M
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAK--SRYSLDVYMGSALVDM 195

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++      A++ FD+   RN   WN++I  Y QN    +A+E+FV+++    I  D++T
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCG-IEPDEIT 254

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKN-----------------------------FVAL 363
             S  SA + L  +  G Q+HA ++K+                             F  +
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 364 PV-----------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           P+                       ++ + ++ER+VVSWN +I+ + QNG ++E + L  
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-------SYLID 453
            ++++       T   LL+A +NL +  +G+Q H ++L+HG  F+  E       + LID
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K GL++  R +FE+    +RD  +WNAMI GY QNG   EA   FR+ML     P+ 
Sbjct: 435 MYMKCGLVEDGRLVFER--MLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDH 492

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+  VL AC+  G +E G+                        Y +S  I +       
Sbjct: 493 VTMIGVLSACSHAGLVEEGR-----------------------CYFQSMTIEHGL----- 524

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +P K+   YT M+   G+ G  + A +L ++M    +EPDA+ + ++L+AC   G +  G
Sbjct: 525 VPVKDH--YTCMVDLLGRAGCLDEANNLIQTMP---MEPDAVVWGSLLAACKVHGNITLG 579

Query: 634 LQIFDLMQQEYKIQP-STEHYCCVADM---LGRVGKVVEAYEFVKELG 677
             + + +    +I P ++  Y  +++M   LGR   VV   + ++++G
Sbjct: 580 KYVAERL---LEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMG 624



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 146/562 (25%), Positives = 229/562 (40%), Gaps = 140/562 (24%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS---------SPYTSCDN- 107
           AR++FD + +  T  WN ++          EA+ L+  M +          S +   D  
Sbjct: 73  ARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRF 132

Query: 108 -------------------YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
                              Y++ S L ACA   +L IG  +H    +   +   ++ ++L
Sbjct: 133 EEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           ++MYS C     A+                  + FD M  RN+V+WN++++ Y +     
Sbjct: 193 VDMYSKCRVVASAQ------------------RAFDDMDVRNIVSWNSLITCYEQNGPAG 234

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           +A+  F  M+  GI P  I+  +V  A +SL   +    ++  ++K   +Y NDL + ++
Sbjct: 235 KALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK-HDKYRNDLVLGNA 293

Query: 269 AIFMYAELGCFDFARKIFD-------------------------------NCLERNTEVW 297
            + MYA+    + AR +FD                               N +ERN   W
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSW 353

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I GY QN    EA+ LF+ +L+ + I     TF + L+A + L +L LG+Q H +I+
Sbjct: 354 NALIAGYTQNGENEEAVRLFL-LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHIL 412

Query: 358 KN------------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGL 391
           K+            FV   +I              V   ++ERD VSWN MI  + QNG 
Sbjct: 413 KHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGY 472

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
             E L +  EM   G   D VT+  +LSA S           HA L+  G        Y 
Sbjct: 473 GTEALEIFREMLVSGERPDHVTMIGVLSACS-----------HAGLVEEG------RCYF 515

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
             M  + GL+              +D  T   M+    + G L+EA    + M    + P
Sbjct: 516 QSMTIEHGLVPV------------KDHYT--CMVDLLGRAGCLDEANNLIQTM---PMEP 558

Query: 512 NVVTIASVLPACNPMGNIELGK 533
           + V   S+L AC   GNI LGK
Sbjct: 559 DAVVWGSLLAACKVHGNITLGK 580



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 191/423 (45%), Gaps = 34/423 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++ FD +     V WN++I  +  N    +A+ ++ +M         D  T +SV  AC
Sbjct: 205 AQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCG--IEPDEITLASVASAC 262

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVEVD---- 172
           A    +R G  +H   ++     +  V  N+L++MY+ C    +A +V  +    D    
Sbjct: 263 ASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSE 322

Query: 173 ------YSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                 Y+K   V     +F  M  RNVV+WN +++ Y +     EAVR F ++ R  I 
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIW 382

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLG----SEYVNDLFVASSAIFMYAELGCF 279
           P+  +F N+  A ++L D K     +  ++K G    S   +D+FV +S I MY + G  
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           +  R +F+  LER+   WN MI GY QN +  EA+E+F ++L   E   D VT +  LSA
Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERP-DHVTMIGVLSA 501

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            S    ++ G+     +      +PV        +D   +  M+    + G  DE   L+
Sbjct: 502 CSHAGLVEEGRCYFQSMTIEHGLVPV--------KD--HYTCMVDLLGRAGCLDEANNLI 551

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             M  +    D+V   +LL+A     N  +GK     LL       G    L +MYA+ G
Sbjct: 552 QTMPMEP---DAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELG 608

Query: 460 LIK 462
             K
Sbjct: 609 RWK 611


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 237/748 (31%), Positives = 380/748 (50%), Gaps = 52/748 (6%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+    +  + LS   + G    AR L D +     V WNT+I     +    EA+ LY
Sbjct: 69  LPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELY 128

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M +     +  ++T +SVL AC     L  G+  H   ++   + + FV N+LL MY+
Sbjct: 129 EGMLREGLVPT--HFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYT 186

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C    DA                   ++FD M   N V++  ++   V+     +A+R 
Sbjct: 187 KCGGVEDA------------------VRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRL 228

Query: 214 FRMMLRMGIRPSTISFVNVF----PALSSLGD----YKSADVVYGLLVKLGSEYVNDLFV 265
           F  M R G+R   ++  +V      A +S  D    ++    ++ L+V+ G  + +D  V
Sbjct: 229 FARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKG--FGSDQHV 286

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            +S I MY +    D A K+FD+    +T  WN +I G+ Q     +A+E+ + ++E   
Sbjct: 287 GNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEV-LNLMEESG 345

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
              ++VT+ + L++  + +++     L A  + + ++ P           V +WNT++S 
Sbjct: 346 SEPNEVTYSNMLASCIKARDV-----LSARAMFDKISRP----------SVTTWNTLLSG 390

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + Q  L  + + L   MQ Q    D  T+  +LS+ S L   D+G Q H+  +R  +H +
Sbjct: 391 YCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHND 450

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + S L+DMY+K G I  AR IF  N   +RD   WN+MI+G   + L EEAF  F+QM
Sbjct: 451 MFVASGLVDMYSKCGQIGIARIIF--NRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQM 508

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             + + P   + AS++ +C  + ++  G+Q+H   ++   DQNV+VG++LIDMY+K G +
Sbjct: 509 RGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNM 568

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + A   F  +  KN V +  MI GY Q+G  E+A+ LF  M      PD +TF+AVL+ C
Sbjct: 569 DDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGC 628

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++GLVDE +  F+ M+  Y I P  EHY C+ D LGR G++VE    +  +  + + + 
Sbjct: 629 SHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPI- 687

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +W  LL +C +H ++EL E  AK L  +D +N  P  +VLLSNIYA  G   +   VR  
Sbjct: 688 VWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSP--YVLLSNIYASLGRHGDASGVRAL 745

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKD 772
           M  RG+ K  G SWID    V+ F   D
Sbjct: 746 MSSRGVVKGRGYSWIDHKDGVHAFMVAD 773



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%)

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           + R L   N +   + +    ++G ++ A  +  ++P++N V++ T+I    +   +  A
Sbjct: 65  AFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEA 124

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           L L+  M   G+ P   T  +VLSAC     +D+G +   L
Sbjct: 125 LELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGL 165


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 227/678 (33%), Positives = 359/678 (52%), Gaps = 72/678 (10%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FD M  RN+V W  ++S Y +  +  EA  +FR M+R G  P+  +F +   A    G
Sbjct: 155 KLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESG 214

Query: 241 --DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA---RKIFDNCLERNTE 295
               K    ++GL+ K  + Y +D+ V +  I MY    C D A   R +FD    RN+ 
Sbjct: 215 PSGCKLGVQIHGLISK--TRYGSDVVVCNVLISMYGS--CLDSANDARSVFDGIGIRNSI 270

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHA 354
            WN++I  Y +    V A +LF   ++ + + F       A S  S L+E    G+++HA
Sbjct: 271 SWNSIISVYSRRGDAVSAYDLFSS-MQKEGLGFS-FKPNDAFSEFSVLEEGRRKGREVHA 328

Query: 355 YIIK-----NFVAL----------------PVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           ++I+     N VA+                   V   ++E+D VSWN++IS   QN   +
Sbjct: 329 HVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSE 388

Query: 394 EG-----LMLVY---------------------------EMQKQGFMIDSVTVTALLSAA 421
           +      LM  Y                           +M + G+ +  VT   +LSA 
Sbjct: 389 DAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAV 448

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S+L   +V  Q HA +L++ +  +  + + L+  Y K G +    +IF +  S  RD+ +
Sbjct: 449 SSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM-SETRDEVS 507

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN+MI+GY  N LL +A      M++     +  T A++L AC  +  +E G ++H   I
Sbjct: 508 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGI 567

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           R  L+ +V VG++L+DMYSK G I+YA+  F  +P +N  ++ +MI GY +HG  E+AL 
Sbjct: 568 RACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 627

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M   G  PD +TFV VLSACS+ G V+EG + F  M + Y++ P  EH+ C+ D+L
Sbjct: 628 LFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLL 687

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS-CRLHG-HSELAEVVAKKLLEMDTRNSM 718
           GR GK+ E  +F+  +  + NVL IW ++LG+ CR +G ++EL    A+ LLE++ +N++
Sbjct: 688 GRAGKLDEVGDFINSMPMKPNVL-IWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAV 746

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
              +VLL+N+YA    WE+V K R  M+E  ++KE GCSW+ +   V+ F + D+ HP+ 
Sbjct: 747 N--YVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEK 804

Query: 779 HKIYEMLERLAMEMRNAG 796
             IY+ L  L  +MR+AG
Sbjct: 805 DLIYDKLRELNRKMRDAG 822



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 230/524 (43%), Gaps = 79/524 (15%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +V +LF++++ I +Y  +G    A+K+FD    RN   W  +I GY QN  P EA   F 
Sbjct: 130 FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFR 189

Query: 319 QVLELDEIVFDDVTFLSALSAV--SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--- 373
            ++     + +   F SAL A   S      LG Q+H  I K      V+V N +I    
Sbjct: 190 DMVRAG-FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 248

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             R+ +SWN++IS + + G       L   MQK+G         
Sbjct: 249 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND 308

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDS 473
           A    +     +  G++ HA+++R G++     + + L++MYAKSG I  A  +FE    
Sbjct: 309 AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL--M 366

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-----------------VTPNV--- 513
            ++D  +WN++I+G  QN   E+A   F  M E++                 V+  V   
Sbjct: 367 VEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYF 426

Query: 514 ------------VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
                       VT  ++L A + +   E+  Q+H   ++Y L  +  +G +L+  Y K 
Sbjct: 427 LQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC 486

Query: 562 GVINYAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           G +N    +FA++ E ++ V++ +MI GY  + +  +A+ L   M   G   D+ TF  +
Sbjct: 487 GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATI 546

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           LSAC+    ++ G+++         I+   E    V     DM  + G++  A  F  EL
Sbjct: 547 LSACASVATLERGMEV-----HACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF-EL 600

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
               NV   W S++     HGH E       K L++ TR  + G
Sbjct: 601 MPLRNVYS-WNSMISGYARHGHGE-------KALKLFTRMMLDG 636



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E  ++LH  SI+Y    N+F+  +LI++Y + G +  A  +F ++  +N VT+  +I GY
Sbjct: 116 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 175

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG--LVDEGLQIFDLMQQ 642
            Q+G  + A + FR M   G  P+   F + L AC  +G      G+QI  L+ +
Sbjct: 176 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 230


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 227/719 (31%), Positives = 380/719 (52%), Gaps = 63/719 (8%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIR-CFSNPSR----FVYNSLLNMYSTCLSSLDAEMVG 165
           +++L AC++ R L  GK VH   +R       R     + N ++ MY  C  +       
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCT------- 66

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                      DL   VFD M+ +NVVAW +++S +     + +A+  FR ML  G+ P 
Sbjct: 67  -----------DLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPD 115

Query: 226 TISFVNVFPALSSLGDYKSAD---VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            I+F ++    S  G  ++ D    V+  +++ G  Y  D  V +  + MY + G  + A
Sbjct: 116 RITFTSILLKWS--GRERNLDEGKRVHSHIMQTG--YEGDRMVMNLVVEMYGKCGDVEQA 171

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             +FD+  + N   W  +I  Y QN H +E + L  ++ +   +  D  TF + L A + 
Sbjct: 172 GNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAG-VKPDGYTFTTVLGACTA 230

Query: 343 LQELDLGQQLHAYIIKNF-----VALPVIVLN----------------AVIERDVVSWNT 381
           +  L+  + LHA  I +       A+   ++N                 +  +D+VSW++
Sbjct: 231 VGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSS 290

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI+AF Q+G     + L+  M  +G   ++VT   +L A ++L+    GK+ HA +++ G
Sbjct: 291 MIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAG 350

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
              +  + S L+ MY   G ++TAR IFE   S +RD  +W++MIAGY+QN     A   
Sbjct: 351 YSDDVCLTSALVKMYCNWGWVETARSIFES--SRERDVVSWSSMIAGYSQNESPARALSL 408

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYS 559
           FR+M    V PN VT  S + AC  +G +  G QLH   +R L LD++V V T+L+++Y 
Sbjct: 409 FREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHE-RVRCLGLDKDVPVATALVNLYG 467

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G +  A  VF  + +KN +T+T++ + YGQ+G   R+L L   M+  G++PD I FVA
Sbjct: 468 KCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVA 527

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +L +C+YAG + +GL  ++LM Q++ I P+ EH  C+ D+LGR GK+  A + +  +  E
Sbjct: 528 ILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE 587

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            ++   W  LL +C+ H  +  A   A+K+ +++ +N+ P  +VLLS+++   G+WE  +
Sbjct: 588 SSL--AWMMLLTACKAHNDTARAARAAEKIFQLEPKNATP--YVLLSSVFCAAGSWEAAE 643

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRF--ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + R+ M  RG+++ +G S I++G  V+ F  AS    H    +I+  LE+L  EM+ AG
Sbjct: 644 ETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAG 702



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/574 (23%), Positives = 264/574 (45%), Gaps = 57/574 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LA  +FD +     V W ++I  F       +A++L+ +M  S    S D  T++S
Sbjct: 64  GCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSG--VSPDRITFTS 121

Query: 113 V-LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           + LK     RNL  GK VH H ++      R V N ++ MY  C    D E  G      
Sbjct: 122 ILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKC---GDVEQAG------ 172

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     VFD+++  NV +W  I++ Y +    +E +R    M + G++P   +F  
Sbjct: 173 ---------NVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTT 223

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A +++G  + A +++   +   +    D  V ++ I +Y + G  + A  +F     
Sbjct: 224 VLGACTAVGALEEAKILHAATIS-STGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDN 282

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++   W++MI  + Q+     AI+L + +++L+ +  ++VTF++ L AV+ L+    G++
Sbjct: 283 KDIVSWSSMIAAFAQSGQAKSAIQLLM-LMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKE 341

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +HA I++   +  V + +A++                    ERDVVSW++MI+ + QN  
Sbjct: 342 IHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNES 401

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
               L L  EM+  G   +SVT  + + A + +     G Q H  +   G+  +  + + 
Sbjct: 402 PARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATA 461

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+++Y K G ++ A  +F       ++  TW ++   Y QNG    +      M    + 
Sbjct: 462 LVNLYGKCGRLEEAEAVFLGMKK--KNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMK 519

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS------LIDMYSKSGVI 564
           P+ +   ++L +CN  G  ++ K LH ++   L+ Q+  +  +      ++D+  ++G +
Sbjct: 520 PDGIVFVAILVSCNYAG--QMSKGLHYYN---LMTQDFGIAPAVEHCGCMVDILGRAGKL 574

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
             A  +   +  ++S+ +  ++     H  + RA
Sbjct: 575 EAAEQLINTMKFESSLAWMMLLTACKAHNDTARA 608



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 141/596 (23%), Positives = 265/596 (44%), Gaps = 98/596 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +FDSI  P    W  II  +  N    E + L S+M ++      D YT+++VL AC
Sbjct: 171 AGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAG--VKPDGYTFTTVLGAC 228

Query: 118 AETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                L   K +H   I     +    V  +L+N+Y  C +  +A  V   +V++D    
Sbjct: 229 TAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGV---FVQID---- 281

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                       +++V+W+++++ + ++ +   A++   +M   G+RP+ ++FVNV  A+
Sbjct: 282 -----------NKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAV 330

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +SL  ++    ++  +V+ G  Y +D+ + S+ + MY   G  + AR IF++  ER+   
Sbjct: 331 TSLKAFQYGKEIHARIVQAG--YSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVS 388

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W++MI GY QN  P  A+ LF + +E+D +  + VTF+SA+ A + +  L  G QLH  +
Sbjct: 389 WSSMIAGYSQNESPARALSLFRE-MEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERV 447

Query: 357 ----IKNFVALPVIVLN----------------AVIERDVVSWNTMISAFVQNGLDDEGL 396
               +   V +   ++N                 + ++++++W ++  A+ QNG     L
Sbjct: 448 RCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSL 507

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAAS------------NLRNQDVGKQTHAYLLRHGIHF 444
            L++ M+ QG   D +   A+L + +            NL  QD G    A  + H    
Sbjct: 508 KLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGI---APAVEHC--- 561

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI-AGYTQNGLLEEAFVAFR- 502
                 ++D+  ++G ++ A Q+   N         W  ++ A    N     A  A + 
Sbjct: 562 ----GCMVDILGRAGKLEAAEQLI--NTMKFESSLAWMMLLTACKAHNDTARAARAAEKI 615

Query: 503 -QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSK 560
            Q+   N TP V+  +    A +     E  +++ G  ++ LL + ++ +G  + +  + 
Sbjct: 616 FQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAA 675

Query: 561 SGVI--NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           S V+  +    +FA + +                        L R M+G G  PDA
Sbjct: 676 SDVLPHHLVGEIFAALEK------------------------LGREMQGAGYVPDA 707



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 100/204 (49%), Gaps = 15/204 (7%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL-----IDMY 558
           M    +   +   A++L AC+ +  +  GK++HG  +R  L Q+     SL     I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            + G  + A +VF ++ ++N V +T++I  +   G    A+ LFR M   G+ PD ITF 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 619 AVLSACSYAGL---VDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           ++L    ++G    +DEG ++   +MQ  Y+      +   V +M G+ G V +A     
Sbjct: 121 SIL--LKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNL--VVEMYGKCGDVEQAGNVFD 176

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGH 698
            + ++ NV   W  ++ +   +GH
Sbjct: 177 SI-QDPNVFS-WTIIIAAYAQNGH 198



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 22/206 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C  G    AR +F+S      V W+++I G+  N  P  A+ L+ +M+        ++ T
Sbjct: 366 CNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDG--VQPNSVT 423

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           + S + ACA    LR G  +H   +RC   +    V  +L+N+Y  C    +AE      
Sbjct: 424 FVSAIDACAGVGALRRGTQLH-ERVRCLGLDKDVPVATALVNLYGKCGRLEEAE------ 476

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        VF  M+++N++ W +I   Y +      +++    M   G++P  I 
Sbjct: 477 ------------AVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIV 524

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVK 254
           FV +  + +  G        Y L+ +
Sbjct: 525 FVAILVSCNYAGQMSKGLHYYNLMTQ 550


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 213/664 (32%), Positives = 354/664 (53%), Gaps = 64/664 (9%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STISFVNVFPALSSL-GD--YKS 244
           R+ V++N+++S      ++  A+   R ML  G    S+ + V+V  A S L GD   + 
Sbjct: 131 RDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRL 190

Query: 245 ADVVYGLLVKLGS-EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER------NTEVW 297
               +   +K G  +   + F  ++ + MYA LG  D A+ +F            +   W
Sbjct: 191 GREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTW 250

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMI   VQ     EA+E+   ++ L  +  D VTF SAL A S+L+ L LG+++HA ++
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLG-VRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 358 KN-------FVALPVI--------------VLNAVIE--RDVVSWNTMISAFVQNGLDDE 394
           K+       FVA  ++              V + V E  R +  WN MI  + Q G+D+E
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEE 369

Query: 395 GLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
            L L   M+ + G      T++ +L A +        +  H Y+++ G+     +++ L+
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALM 429

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML------- 505
           DMYA+ G +  AR+IF   D   RD  +WN +I G    G   EAF    +M        
Sbjct: 430 DMYARLGEMDVARRIFAMIDP--RDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPS 487

Query: 506 ---------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
                     H   PN +T+ ++LP C  +     GK++HG+++R+ L+ ++ VG++L+D
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVD 547

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAI 615
           MY+K G +  +  VF ++P +N +T+  +I+ YG HG+ + A++LF  M   G   P+ +
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+A L+ACS++GLVD GL++F  M++++ ++P+ + + CV D+LGR G++ EAY  +  
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG---YHVLLSNIYAEE 732
           +      +  W SLLG+CRLH + EL EV A++L E++     PG   ++VLL NIY+  
Sbjct: 668 MEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELE-----PGEASHYVLLCNIYSAA 722

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W+    VR  MR +G+ KE GCSWI++ G ++RF + +  HP S +++  ++ L   M
Sbjct: 723 GMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERM 782

Query: 793 RNAG 796
           R  G
Sbjct: 783 RREG 786



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 182/395 (46%), Gaps = 57/395 (14%)

Query: 58  ARQLFDSITRPTTVI--WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           AR++FD +  P+  +  WN +I G+    +  EA+ L+S+M+  +     +  T S VL 
Sbjct: 337 ARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSET-TMSGVLP 395

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA +      +A+H + ++     +RFV N+L++MY+             +  E+D ++
Sbjct: 396 ACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYA-------------RLGEMDVAR 442

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR------------ 223
                ++F  +  R+VV+WNT+++  V      EA   F+++  M +             
Sbjct: 443 -----RIFAMIDPRDVVSWNTLITGCVVQGHAAEA---FQLVTEMQLPSPSPSSSSTTEE 494

Query: 224 -------PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
                  P+ I+ + + P  ++L        ++G  V+   E  +D+ V S+ + MYA+ 
Sbjct: 495 GEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALE--SDIAVGSALVDMYAKC 552

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           GC   +R +FD    RN   WN +I  Y  +    EA+ LF ++    E   ++VTF++A
Sbjct: 553 GCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAA 612

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           L+A S    +D G +L   + ++    P   L+A +          +    + G  DE  
Sbjct: 613 LAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACV----------VDVLGRAGRLDEAY 662

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ++  M+     + +   ++LL A    RN ++G+
Sbjct: 663 SIITSMEPGEQQVSA--WSSLLGACRLHRNVELGE 695



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 38/268 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK------------KSS 100
           G   +AR++F  I     V WNT+I G V      EA  L ++M+            +  
Sbjct: 436 GEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEG 495

Query: 101 PYTSC--DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
               C  +N T  ++L  CA       GK +H + +R        V ++L++MY+ C   
Sbjct: 496 EAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKC-GC 554

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           L A                    VFD + RRNV+ WN ++  Y       EAV  F  M 
Sbjct: 555 LAASRA-----------------VFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMA 597

Query: 219 RMG-IRPSTISFVNVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
             G   P+ ++F+    A S  G   +  ++ +G+    G +   DL   +  + +    
Sbjct: 598 AGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLH--ACVVDVLGRA 655

Query: 277 GCFDFARKIFDNCL--ERNTEVWNTMIG 302
           G  D A  I  +    E+    W++++G
Sbjct: 656 GRLDEAYSIITSMEPGEQQVSAWSSLLG 683


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 237/803 (29%), Positives = 415/803 (51%), Gaps = 78/803 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A   F+ +     V WN+++ GF+      E++ ++ +M +S      DN ++S +LK C
Sbjct: 134 ASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSG--VEFDNKSFSVILKVC 191

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   N ++G  +H   +R   +      ++LL+MY+ C                   + D
Sbjct: 192 SILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKC------------------KRLD 233

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M ++N ++W+ I++  V+       ++ F+ M ++G+  S   + +V  + +
Sbjct: 234 ESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCA 293

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L D +    ++   +K  S++V D  V ++ + MYA+      A+++FD     N + +
Sbjct: 294 TLPDLRLGTQLHAHALK--SDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSY 351

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY Q ++   A+ LF + L    + FD+++   AL A + ++ L  G QLH    
Sbjct: 352 NAMITGYSQKDNGFRALLLFRK-LSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLAT 410

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K+  +  + V NA I+                    +D VSWN +I+A  QN    + L 
Sbjct: 411 KSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLN 470

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
           ++  M + G   D  T  ++L A +   + + G + H  +++ G+     + S L+DMY+
Sbjct: 471 ILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYS 529

Query: 457 KSGLIKTARQIFEK-----NDS--------------GDRDQ------ATWNAMIAGYTQN 491
           K G+I  A +I  K      DS              G +D+       +WNA+I+GY   
Sbjct: 530 KCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMR 589

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
              E+A   F +M+E  +TP+  T ++VL  C  + +I LGKQ+H   I+  L  +V++ 
Sbjct: 590 KQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYIC 649

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           ++L+DMYSK G ++ +  +F K P ++ VT+  MI GY  HGM E A+ LF SM    I 
Sbjct: 650 STLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIM 709

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           P+  TFV++L AC++ GLV+ GL  F +M++EY + P  EHY  + D+LG+ G+V +A E
Sbjct: 710 PNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALE 769

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLH-GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            ++E+  E + + IW +LL +C+++  + E AEV A  LL +D ++S    ++LLSNIYA
Sbjct: 770 LIQEMPFEADDV-IWRTLLSACKINRNNVEAAEVAANALLRLDPQDS--STYILLSNIYA 826

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
           + G W+   ++R  MR   L+KE GCSW+++    + F   D+ HP+  +IY  L  +  
Sbjct: 827 DAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYN 886

Query: 791 EMRNAGNKTIQNSNVDATPRFDE 813
           EM    N ++  + V+ +  ++E
Sbjct: 887 EM----NLSVGGTMVEISGFYNE 905



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 181/717 (25%), Positives = 320/717 (44%), Gaps = 89/717 (12%)

Query: 84  NLPYEAILLYS----QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           N+PY  + ++S     +    P TS  N+++  V K CA+ R   +GK  H H I     
Sbjct: 24  NIPYRRVRIFSISTASVNHEKPATSVANFSF--VFKECAKQRAHELGKQAHAHMIISGFR 81

Query: 140 PSRFVYNSLLNMYSTC------LSSLDA----EMVGLKYVEVDYSKYDLVCKV---FDTM 186
           P+ FV N LL +Y  C          D     ++V    +   Y+  + + +    F+ M
Sbjct: 82  PTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMM 141

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
             R+VV+WN+++S +++T   +E+V+ F  M R G+     SF  +    S L +YK   
Sbjct: 142 PTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGT 201

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++G+ +++G  Y  D+   S+ + MYA+    D +  +F    ++N   W+ +I G VQ
Sbjct: 202 QIHGIALRMG--YDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQ 259

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           NN     +++F ++ ++   V   + + S L + + L +L LG QLHA+ +K+      I
Sbjct: 260 NNFLDGGLKMFKEMQKVGVGVSQSI-YASVLKSCATLPDLRLGTQLHAHALKSDFVKDGI 318

Query: 367 VLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V  A ++                     ++ S+N MI+ + Q       L+L  ++ K  
Sbjct: 319 VRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSS 378

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              D ++++  L A + ++    G Q H    +        + +  IDMY K   +  A 
Sbjct: 379 LGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEAC 438

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F+  + G +D  +WNA+IA + QN    +       ML   + P+  T  SVL AC  
Sbjct: 439 RVFD--EMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG 496

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA-------------ANVFA 572
             ++  G ++H   ++  +  N ++G+SL+DMYSK G+I+ A             +N ++
Sbjct: 497 -DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYS 555

Query: 573 KIPE--------------KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           + PE              +  V++  +I GY     SE A   F  M   GI PD  T+ 
Sbjct: 556 EHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYS 615

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKEL 676
            VL  C+    +  G QI        K +   + Y C  + DM  + G + ++    + +
Sbjct: 616 TVLDTCANLASIGLGKQIH---AHVIKKELQYDVYICSTLVDMYSKCGNLHDS----RLM 668

Query: 677 GEEGNVLEI--WGSLLGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNIYA 730
            E+  + +   W +++     HG  E     A KL E M   N MP +   +S + A
Sbjct: 669 FEKAPIRDFVTWNAMICGYAHHGMGE----EAIKLFESMVLMNIMPNHATFVSLLRA 721


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 194/569 (34%), Positives = 312/569 (54%), Gaps = 54/569 (9%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D+A K+FD     N   WNT+I  +  +  P++ + +F+Q+L   +   +  TF   + 
Sbjct: 80  LDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIK 139

Query: 339 AVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVS 378
           A +++  L  GQ +H  ++K       F++  +I              V + ++E+D+VS
Sbjct: 140 AATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVS 199

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN+MIS FVQ G  +E L L   M+ +    + VT+  +LSA +   + + G+    Y+ 
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDS----------------GDRDQA-- 479
           R+GI     + + ++DMY K G ++ AR++F+K +                 GD D A  
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319

Query: 480 -----------TWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMG 527
                       WNA+I+ Y QNG  +EA   FR++ L  N  PN VT+AS L AC  +G
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            ++LG  +H +  +  +  N  + TSLIDMYSK G +  A  VF  +  ++   ++ MI 
Sbjct: 380 AMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIA 439

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           G   HG    A+ LF  M+   ++P+A+TF  +L ACS++GLVDEG   F+ M+  Y + 
Sbjct: 440 GLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVV 499

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P ++HY C+ D+LGR G + EA E ++++    +   +WG+LLG+CR++G+ ELAE+   
Sbjct: 500 PGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSA-SVWGALLGACRIYGNVELAEMACS 558

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
           +LLE D+ N   G +VLLSNIYA+ G W+ V ++R+ M+  GL KE GCS I+V G ++ 
Sbjct: 559 RLLETDSNNH--GAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHE 616

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F   D  HP S +IY  L+ +   +++ G
Sbjct: 617 FLVGDNSHPLSTEIYSKLDEIVARIKSTG 645



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 153/580 (26%), Positives = 266/580 (45%), Gaps = 109/580 (18%)

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNS 147
           IL  +  +KS+P T         ++  CA  ++L   K +H H +R   F +P      S
Sbjct: 19  ILTANNEQKSNPST------VPILIDKCANKKHL---KQLHAHMLRTGLFFDPP-----S 64

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
              +++ C  S               S  D  CKVFD + R N+  WNT++  +  + + 
Sbjct: 65  ATKLFTACALS-------------SPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKP 111

Query: 208 VEAVRQFRMMLRMGIR-PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           ++ +  F  ML    R P++ +F  V  A + +    +   ++G+++K  + + +DLF++
Sbjct: 112 IQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMK--ASFGSDLFIS 169

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S I  Y+ LG  D A  +F   +E++   WN+MI G+VQ   P EA++LF + ++++  
Sbjct: 170 NSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLF-KRMKMENA 228

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             + VT +  LSA ++  +L+ G+    YI +N + + +I+ NA++              
Sbjct: 229 RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARR 288

Query: 373 ------ERDVVSWNTM-------------------------------ISAFVQNGLDDEG 395
                 E+D+VSW TM                               IS++ QNG   E 
Sbjct: 289 LFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEA 348

Query: 396 LMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
           L +  E+Q  +    + VT+ + L+A + L   D+G   H Y+ + GI     + + LID
Sbjct: 349 LAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLID 408

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G ++ A ++F   +   RD   W+AMIAG   +G    A   F +M E  V PN 
Sbjct: 409 MYSKCGHLEKALEVFYSVER--RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNA 466

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ-----NVFVGTS----LIDMYSKSGVI 564
           VT  ++L AC+  G ++ G        R   +Q      V  G+     ++D+  ++G +
Sbjct: 467 VTFTNLLCACSHSGLVDEG--------RLFFNQMRPVYGVVPGSKHYACMVDILGRAGCL 518

Query: 565 NYAANVFAKIPEKNSVTYTTMILG----YGQHGMSERALS 600
             A  +  K+P   S +    +LG    YG   ++E A S
Sbjct: 519 EEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACS 558



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 239/539 (44%), Gaps = 76/539 (14%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPH---LARQLFDSITRPTTVIWNTIIIG 79
            L Q+H+          P   ++L   C    P     A ++FD I RP    WNT+I  
Sbjct: 45  HLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRA 104

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           F  +  P + +L++ QM   S     ++YT+  V+KA  E  +L  G+A+H   ++    
Sbjct: 105 FASSPKPIQGLLVFIQMLHESQRFP-NSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              F+ NSL++ YS+ L  LD+  +                 VF  +  +++V+WN+++S
Sbjct: 164 SDLFISNSLIHFYSS-LGDLDSAYL-----------------VFSKIVEKDIVSWNSMIS 205

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS--------------- 244
            +V+     EA++ F+ M     RP+ ++ V V  A +   D +                
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI 265

Query: 245 ----ADVVYGLLVKLGS-EYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCL 290
               ++ +  + VK GS E    LF           ++ I  YA++G +D AR++FD   
Sbjct: 266 NLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMP 325

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +   WN +I  Y QN  P EA+ +F ++        ++VT  S L+A +QL  +DLG 
Sbjct: 326 REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGG 385

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            +H YI K  + L   +  ++I+                    RDV  W+ MI+    +G
Sbjct: 386 WIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHG 445

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMES 449
                + L  +MQ+     ++VT T LL A S+    D G+     +   +G+   G + 
Sbjct: 446 HGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGV-VPGSKH 504

Query: 450 Y--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           Y  ++D+  ++G ++ A ++ EK        + W A++      G +E A +A  ++LE
Sbjct: 505 YACMVDILGRAGCLEEAVELIEKMPIVP-SASVWGALLGACRIYGNVELAEMACSRLLE 562


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 212/692 (30%), Positives = 377/692 (54%), Gaps = 54/692 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D++T+  VLK C+++ ++  G  VH    +   +   +V N+LL +Y  C    DA    
Sbjct: 9   DDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRP 224
                          ++FD M  R+VV+WNTI+        Y EA    F M+LR  I+P
Sbjct: 66  ---------------RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP 110

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + +S +++ P  ++L D +    ++   VK+G +  + +   ++ +  Y + G      +
Sbjct: 111 NLVSVISLLPISAALEDEEMTRRIHCYSVKVGLD--SQVTTCNALVDAYGKCGSVKALWQ 168

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F+  +E+N   WN++I G        +A+  F  +++      + VT  S L  + +L+
Sbjct: 169 VFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQP-NSVTISSILPVLVELE 227

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
               G+++H + ++      + + N++I+                    R++VSWN MI+
Sbjct: 228 CFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIA 287

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +  N L  E +  V +MQ+ G   ++VT T +L A + L     GK+ HA  +R G+  
Sbjct: 288 NYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTS 347

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + + LIDMYAK G + +AR +F   ++  +D+ ++N +I GY++     ++   F +
Sbjct: 348 DLFVSNSLIDMYAKCGCLHSARNVF---NTSRKDEVSYNILIIGYSETDDCLQSLNLFSE 404

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M      P+VV+   V+ AC  +  ++ GK++HG ++R  L  ++FV  SL+D Y+K G 
Sbjct: 405 MRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGR 464

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I+ A  +F +I  K+  ++ TMILGYG  G  E A+S+F +M+   ++ D ++++AVLSA
Sbjct: 465 IDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSA 524

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL--GEEGN 681
           CS+ GLV+ G Q F  M  + +++P+  HY C+ D+LGR G V EA + +++L    + N
Sbjct: 525 CSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDAN 583

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              IWG+LLG+CR++G+ EL    A+ L E+  ++   GY++LLSNIYAE G W+  +K+
Sbjct: 584 ---IWGALLGACRIYGNVELGRRAAEHLFELKPQHC--GYYILLSNIYAETGRWDEANKI 638

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
           R+ M+ RG +K  GCSW+ +   V+ F ++++
Sbjct: 639 RELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 294/648 (45%), Gaps = 85/648 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V WNTII     N    EA   Y  M   S     +  +  S+L   
Sbjct: 64  ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKP-NLVSVISLLPIS 122

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +  + + +HC+ ++   +      N+L++ Y  C  S+ A                
Sbjct: 123 AALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKC-GSVKA---------------- 165

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
            + +VF+    +N V+WN+I++      R  +A+  FRMM+  G +P++++  ++ P L 
Sbjct: 166 -LWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLV 224

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L  +K+   ++G  +++G+E   D+F+A+S I MYA+ G    A  IF N   RN   W
Sbjct: 225 ELECFKAGKEIHGFSMRMGTE--TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSW 282

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI  Y  N  P+EAI   +Q+ E  E   + VTF + L A ++L  L  G+++HA  +
Sbjct: 283 NAMIANYALNRLPLEAIRFVIQMQETGECP-NAVTFTNVLPACARLGFLGPGKEIHAMGV 341

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  +   + V N++I+                   +D VS+N +I  + +     + L L
Sbjct: 342 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSETDDCLQSLNL 401

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
             EM+  G   D V+   ++SA +NL     GK+ H   LR+ ++    + + L+D Y K
Sbjct: 402 FSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTK 461

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I  A ++F  N    +D A+WN MI GY   G LE A   F  M +  V  ++V+  
Sbjct: 462 CGRIDIACRLF--NQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYI 519

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +VL AC+  G +E G Q                               Y + + A+  E 
Sbjct: 520 AVLSACSHGGLVERGWQ-------------------------------YFSEMLAQRLEP 548

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             + YT M+   G+ G  E A  L + +    I PDA  + A+L AC   G V+ G +  
Sbjct: 549 TEMHYTCMVDLLGRAGFVEEAAKLIQQLP---IAPDANIWGALLGACRIYGNVELGRRA- 604

Query: 638 DLMQQEYKIQPS-TEHYCCVADMLGRVGKVVEA---YEFVKELGEEGN 681
              +  ++++P    +Y  ++++    G+  EA    E +K  G + N
Sbjct: 605 --AEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 650



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 169/333 (50%), Gaps = 24/333 (7%)

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------- 372
           +  DD TF   L   S   ++  G ++H  + K      V V N ++             
Sbjct: 6   VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR 65

Query: 373 -------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNL 424
                  ERDVVSWNT+I     NG   E     + M  +  +  + V+V +LL  ++ L
Sbjct: 66  RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 125

Query: 425 RNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            ++++ ++ H Y ++ G+  +    + L+D Y K G +K   Q+F  N++ ++++ +WN+
Sbjct: 126 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVF--NETVEKNEVSWNS 183

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +I G    G   +A  AFR M++    PN VTI+S+LP    +   + GK++HGFS+R  
Sbjct: 184 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 243

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + ++F+  SLIDMY+KSG    A+ +F  +  +N V++  MI  Y  + +   A+    
Sbjct: 244 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI 303

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            M+  G  P+A+TF  VL AC+  G +  G +I
Sbjct: 304 QMQETGECPNAVTFTNVLPACARLGFLGPGKEI 336



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 192/420 (45%), Gaps = 40/420 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YT 109
           + G    A  +F ++ R   V WN +I  +  N LP EAI    QM+++     C N  T
Sbjct: 260 KSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETG---ECPNAVT 316

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +++VL ACA    L  GK +H   +R       FV NSL++MY+ C     A        
Sbjct: 317 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR------- 369

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF+T  R++ V++N ++  Y +T+  ++++  F  M  +G +P  +SF
Sbjct: 370 -----------NVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSF 417

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V V  A ++L   K    V+G  V L +   + LFV++S +  Y + G  D A ++F+  
Sbjct: 418 VGVISACANLAALKQGKEVHG--VALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI 475

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L ++   WNTMI GY        AI +F + +  D + +D V++++ LSA S    ++ G
Sbjct: 476 LFKDVASWNTMILGYGMIGELETAISMF-EAMRDDTVQYDLVSYIAVLSACSHGGLVERG 534

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            Q  + +           L   +E   + +  M+    + G  +E   L+   Q+     
Sbjct: 535 WQYFSEM-----------LAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLI---QQLPIAP 580

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D+    ALL A     N ++G++   +L        G    L ++YA++G    A +I E
Sbjct: 581 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 640



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 16/201 (7%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M+   V  +  T   VL  C+   +I  G ++HG   +   D +V+VG +L+ +Y   G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS-----LFRSMKGCGIEPDAITFV 618
           +N A  +F ++PE++ V++ T+I     +G    A +     + RS+    I+P+ ++ +
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV----IKPNLVSVI 116

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKEL 676
           ++L     A L DE +    +     K+   ++   C A  D  G+ G V   ++   E 
Sbjct: 117 SLLPIS--AALEDEEMT-RRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET 173

Query: 677 GEEGNVLEIWGSLLGSCRLHG 697
            E+  V   W S++      G
Sbjct: 174 VEKNEV--SWNSIINGLACKG 192


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 225/704 (31%), Positives = 367/704 (52%), Gaps = 65/704 (9%)

Query: 122 NLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           +LR+G+A+H   +R    +    V NSLL +YS C +   A                   
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASAR------------------ 104

Query: 181 KVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            VFD MR  R++V+W  + S   +      ++     ML  G+ P+  +      A    
Sbjct: 105 NVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPH 164

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
             Y     V   LV     +  D+ V S+ I M A  G    ARK+FD  +E+   VW  
Sbjct: 165 ELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTL 224

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I  YVQ     EA+ELF+  LE D    D  T  S +SA ++L  + LG QLH+  ++ 
Sbjct: 225 LISRYVQGECAEEAVELFLDFLE-DGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRM 283

Query: 360 FVALPVIV-------------------LNAVIER----DVVSWNTMISAFVQNGLDDEGL 396
            +A    V                    N V ER    DV+SW  +IS +VQ+G+ +  +
Sbjct: 284 GLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKV 343

Query: 397 MLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHFEGMESYLI 452
           M ++ EM  +    + +T +++L + +++ + D G+Q HA++++      H  G  + L+
Sbjct: 344 MALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVG--NALV 401

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYA+SG ++ AR++F        +Q    +MI   T+       F    +++  +V  +
Sbjct: 402 SMYAESGCMEEARRVF--------NQLYERSMIPCITEG----RDFPLDHRIVRMDVGIS 449

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             T AS++ A   +G +  G+QLH  S++     + FV  SL+ MYS+ G +  A   F 
Sbjct: 450 SSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFN 509

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           ++ ++N +++T+MI G  +HG +ERALSLF  M   G++P+ +T++AVLSACS+ GLV E
Sbjct: 510 ELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVRE 569

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G + F  MQ+++ + P  EHY C+ D+L R G V EA EF+ E+  + + L +W +LLG+
Sbjct: 570 GKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPLKADAL-VWKTLLGA 628

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR H + E+ E+ AK ++E++ R+  P  +VLLSN+YA+ G W+ V ++R  MR+  L K
Sbjct: 629 CRSHDNIEVGEITAKNVVELEPRDPAP--YVLLSNLYADAGLWDEVARIRSAMRDNNLNK 686

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           E G SW++V    + F + D  HP++  IY  L+ L  +++  G
Sbjct: 687 ETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQIKGMG 730



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 229/476 (48%), Gaps = 62/476 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +   T V+W  +I  +V      EA+ L+    +       D YT SS++ AC
Sbjct: 207 ARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDG--FEPDRYTMSSMISAC 264

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E  ++R+G  +H   +R        V   L++MY+   S++   M        DY+   
Sbjct: 265 TELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK--SNIGQAM--------DYAN-- 312

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
              KVF+ M + +V++W  ++S YV++   E  V A+  F  ML   I+P+ I++ ++  
Sbjct: 313 ---KVFERMPKNDVISWTALISGYVQSGVQENKVMAL--FGEMLNESIKPNHITYSSILK 367

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           + +S+ D+ S   V+  ++K  S   +   V ++ + MYAE GC + AR++F+   ER  
Sbjct: 368 SCASISDHDSGRQVHAHVIK--SNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER-- 423

Query: 295 EVWNTMIGGYVQN-NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
               +MI    +  + P++      +++ +D +     TF S +SA + +  L  GQQLH
Sbjct: 424 ----SMIPCITEGRDFPLDH-----RIVRMD-VGISSSTFASLISAAASVGMLTKGQQLH 473

Query: 354 AYIIK------NFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDD 393
           A  +K       FV+  ++ +              N + +R+V+SW +MIS   ++G  +
Sbjct: 474 AMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAE 533

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY-- 450
             L L ++M   G   + VT  A+LSA S++     GK+    + R HG+    ME Y  
Sbjct: 534 RALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGL-IPRMEHYAC 592

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++D+ A+SG++K A + F        D   W  ++     +  +E   +  + ++E
Sbjct: 593 MVDLLARSGIVKEALE-FINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVE 647



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 189/428 (44%), Gaps = 50/428 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
           A ++F+ + +   + W  +I G+V + +    ++ L+ +M   S     ++ TYSS+LK+
Sbjct: 311 ANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNES--IKPNHITYSSILKS 368

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA   +   G+ VH H I+     +  V N+L++MY+      +A               
Sbjct: 369 CASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEAR-------------- 414

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VF+ +  R+++   T    +    R V          RM +  S+ +F ++  A 
Sbjct: 415 ----RVFNQLYERSMIPCITEGRDFPLDHRIV----------RMDVGISSSTFASLISAA 460

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +S+G       ++ + +K G  + +D FV++S + MY+  G  + A + F+   +RN   
Sbjct: 461 ASVGMLTKGQQLHAMSLKAG--FGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS 518

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +MI G  ++ +   A+ LF  ++ L  +  +DVT+++ LSA S +  +  G++    +
Sbjct: 519 WTSMISGLAKHGYAERALSLFHDMI-LTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSM 577

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            ++   +P           +  +  M+    ++G+  E L  + EM  +    D++    
Sbjct: 578 QRDHGLIP----------RMEHYACMVDLLARSGIVKEALEFINEMPLKA---DALVWKT 624

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL---IKTARQIFEKNDS 473
           LL A  +  N +VG+ T   ++            L ++YA +GL   +   R     N+ 
Sbjct: 625 LLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNL 684

Query: 474 GDRDQATW 481
                 +W
Sbjct: 685 NKETGLSW 692


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 218/709 (30%), Positives = 378/709 (53%), Gaps = 68/709 (9%)

Query: 122 NLRIGKAVHCHFIRCFS--NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
           ++ +G+A+  H +R  S       V NSLL +YS C +   A                  
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAAR----------------- 104

Query: 180 CKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA-L 236
             VFD M    R++V+W  + S   +     EA+R F   L  G+ P+  +      A  
Sbjct: 105 -SVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACF 163

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +S   + +   V GL+ KLG  +  D+ V  + I M+A+ G     R++FD   ER   V
Sbjct: 164 ASELFHLAGGAVLGLVFKLGF-WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVV 222

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  +I  Y Q+ +  EA+ELF+ +LE +    D  T  S LSA ++L    LGQQLH+  
Sbjct: 223 WTLLITRYAQSGYSDEAVELFLDMLE-NGFQPDQYTLSSMLSACTELGSFRLGQQLHSLA 281

Query: 357 IK------NFVALPVI-----------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           ++      + V+  ++                 V N + + +V++W  ++S +VQ G  D
Sbjct: 282 LRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQD 341

Query: 394 EGLMLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYL 451
             +M+++ +M  +G   + +T +++L A +NL +QD G+Q H + ++  +     + + L
Sbjct: 342 NQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNAL 401

Query: 452 IDMYAKSGLIKTAR----QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           + MYA+SG I+ AR    Q++EKN        +++  + G  ++   ++      Q+   
Sbjct: 402 VSMYAESGSIEEARHAFDQLYEKN------MVSFSGNLDGDGRSNTYQD-----YQIERM 450

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            +  +  T  S++ A   +G +  G++LH  S++     +  +G SL+ MYS+ G +  A
Sbjct: 451 ELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDA 510

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF ++ + N +++T+MI G  +HG + RAL LF  M   G++P+ +T++AVLSACS+A
Sbjct: 511 CQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHA 570

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV EG + F +MQ+ + + P  EHY C+ D+LGR G V +A +F+ E+  + + L +W 
Sbjct: 571 GLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDAL-VWK 629

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LLG+C+ H + ++ E+ A  +++++ ++  P  +VLLSN+YAE G W+ V ++R  MR+
Sbjct: 630 TLLGACKTHNNMDIGEIAANHVIQLEPQDPAP--YVLLSNLYAEAGLWDQVARIRSLMRD 687

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + L KE G SW+ V   ++ F + D  HPQ+ +IY  LE L  E++  G
Sbjct: 688 KNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMG 736



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 56/433 (12%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +   T V+W  +I  +  +    EA+ L+  M ++      D YT SS+L AC 
Sbjct: 209 RRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQP--DQYTLSSMLSACT 266

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  + R+G+ +H   +R        V   L++MY+   +                     
Sbjct: 267 ELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAR------------- 313

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYV-KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             +VF+ M + NV+AW  ++S YV +  +  + +  F  ML  GIRP+ I++ ++  A +
Sbjct: 314 --EVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACA 371

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +LGD  S   ++   VK     +N   V ++ + MYAE G  + AR  FD   E+N   +
Sbjct: 372 NLGDQDSGRQIHTHCVKSNLADLN--VVGNALVSMYAESGSIEEARHAFDQLYEKNMVSF 429

Query: 298 NTMIGGYVQNN----HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           +  + G  ++N    + +E +EL +             TF S +SA + +  L  GQ+LH
Sbjct: 430 SGNLDGDGRSNTYQDYQIERMELGISTF----------TFGSLISAAASVGMLTKGQRLH 479

Query: 354 AYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           A  +K                     ++     V + + + +V+SW +MIS   ++G   
Sbjct: 480 ALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAA 539

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--L 451
             L L ++M   G   + VT  A+LSA S+      GK+    + +H      ME Y  +
Sbjct: 540 RALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACM 599

Query: 452 IDMYAKSGLIKTA 464
           +D+  +SGL++ A
Sbjct: 600 VDLLGRSGLVEDA 612



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/410 (22%), Positives = 186/410 (45%), Gaps = 50/410 (12%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVC-NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           H AR++F+ + +   + W  ++ G+V   +   + ++L+ +M         ++ TYSS+L
Sbjct: 310 HNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRP--NHITYSSML 367

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KACA   +   G+ +H H ++        V N+L++MY+   S  +A             
Sbjct: 368 KACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEAR------------ 415

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                   FD +  +N+V+++  +    ++  Y     Q   + RM +  ST +F ++  
Sbjct: 416 ------HAFDQLYEKNMVSFSGNLDGDGRSNTY-----QDYQIERMELGISTFTFGSLIS 464

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +S+G       ++ L +K G  + +D  + +S + MY+  G    A ++FD   + N 
Sbjct: 465 AAASVGMLTKGQRLHALSLKAG--FGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNV 522

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W +MI G  ++ +   A+ELF  ++    +  +DVT+++ LSA S    +  G++   
Sbjct: 523 ISWTSMISGLAKHGYAARALELFHDMIAAG-VKPNDVTYIAVLSACSHAGLVKEGKEHFR 581

Query: 355 YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
            + K+   +P           +  +  M+    ++GL ++ L  + EM  Q   +D++  
Sbjct: 582 MMQKHHGLIP----------RMEHYACMVDLLGRSGLVEDALDFINEMPCQ---VDALVW 628

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES----YLIDMYAKSGL 460
             LL A     N D+G+        H I  E  +      L ++YA++GL
Sbjct: 629 KTLLGACKTHNNMDIGE----IAANHVIQLEPQDPAPYVLLSNLYAEAGL 674


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 224/723 (30%), Positives = 369/723 (51%), Gaps = 62/723 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  TYS  LK C  TR+  IG  VH    +          NSL+++YS C          
Sbjct: 65  DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKC---------- 114

Query: 166 LKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                    +++    +F  M   R++++W+ +VS +        A+  F  M+  G  P
Sbjct: 115 --------GQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV-NDLFVASSAIFMYAE-LGCFDFA 282
           +   F     A S+       D ++G ++K G  Y+ +D+ V    I M+ +  G    A
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVIKTG--YLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K+F+   ERN   W  MI   +Q  +  EAI+LF+ ++       D  T    +SA + 
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMI-FSGYEPDRFTLSGVISACAN 283

Query: 343 LQELDLGQQLHAYIIKNFVALPVIV-----------------------LNAVIERDVVSW 379
           ++ L LGQQLH+  I++ + L   V                        + +++ +V SW
Sbjct: 284 MELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSW 343

Query: 380 NTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
             MI+ +VQ G  D+E L L   M     + +  T ++ L A +NL    +G+Q   + +
Sbjct: 344 TAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 439 RHGIH-FEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + G      + + LI MYA+SG I  AR+    +FEKN        ++N +I  Y +N  
Sbjct: 404 KLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN------LISYNTVIDAYAKNLN 457

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA   F ++ +  +  +  T AS+L     +G I  G+Q+H   I+  L  N  V  +
Sbjct: 458 SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNA 517

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MYS+ G I  A  VF  + ++N +++T++I G+ +HG + +AL LF  M   G+ P+
Sbjct: 518 LISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPN 577

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +T++AVLSACS+ GLV+EG + F  M  E+ + P  EHY C+ D+LGR G + EA +F+
Sbjct: 578 EVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFI 637

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +  + + L +W + LG+CR+HG+ EL +  AK ++E +  +  P  ++LLSN+YA   
Sbjct: 638 NSMPYKADAL-VWRTFLGACRVHGNLELGKHAAKMIIEQEPHD--PAAYILLSNLYASIS 694

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W+ V  +RK M+E+ L KE GCSW++V   V++F   D  HP++ +IY+ L+ L+++++
Sbjct: 695 KWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIK 754

Query: 794 NAG 796
             G
Sbjct: 755 KLG 757



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 24/304 (7%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    AR++FD I       W  +I G+V       EA+ L+  M  +  +   
Sbjct: 317 AKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT--HVIP 374

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++T+SS LKACA    LRIG+ V  H ++   +    V NSL++MY+      DA    
Sbjct: 375 NHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR--- 431

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N++++NT++  Y K     EA+  F  +   G+  S
Sbjct: 432 ---------------KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++  ++K G +      V ++ I MY+  G  + A ++
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS--VCNALISMYSRCGNIESAFQV 534

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  +RN   W ++I G+ ++    +A+ELF ++LE + +  ++VT+++ LSA S +  
Sbjct: 535 FEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLE-EGVRPNEVTYIAVLSACSHVGL 593

Query: 346 LDLG 349
           ++ G
Sbjct: 594 VNEG 597



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     + +NT+I  +  N    EA+ L+++++      
Sbjct: 416 SLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGA 475

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   I+     ++ V N+L++MYS C        
Sbjct: 476 SA--FTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRC-------- 525

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                        +   +VF+ M  RNV++W +I++ + K     +A+  F  ML  G+R
Sbjct: 526 ----------GNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575

Query: 224 PSTISFVNVFPALSSLG 240
           P+ ++++ V  A S +G
Sbjct: 576 PNEVTYIAVLSACSHVG 592


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 230/722 (31%), Positives = 369/722 (51%), Gaps = 73/722 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           ++  +L  C   ++L+ GKA+H   +R  S  S ++ NSL+N+Y+ C S + A++V    
Sbjct: 12  SFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV---- 67

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK--TERYVEAVRQFRMMLRMGIRPST 226
                         F+++  ++VV+WN +++ Y +  T  Y   +  F+ M      P+ 
Sbjct: 68  --------------FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNG 113

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  VF A SS  +       + L +K  + Y  D+FV SS I MY ++GC   ARK+F
Sbjct: 114 HTFSGVFTAASSSPETFGGLQAHALAIKTSNFY--DVFVGSSLINMYCKIGCMLDARKVF 171

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   ERNT  W T+I GY       EA ELF+ ++  +E   D   + S LSA++    +
Sbjct: 172 DTIPERNTVSWATIISGYAMERMAFEAWELFL-LMRREEGAHDKFIYTSVLSALTVPDLV 230

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G+Q+H   +KN +     V NA++                    ++D ++W+ MI+ +
Sbjct: 231 HYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGY 290

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG----I 442
            Q G   E L L Y M   G      T   +++A S++   + GKQ H Y L+ G    I
Sbjct: 291 AQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQI 350

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           +F     YL    AK G +  AR+ F+     + D   W +                   
Sbjct: 351 YFRKGFDYL---KAKCGSLVDARKGFDYLK--EPDIVLWTSC------------------ 387

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M    + P+ +T+ASVL AC+ +  +E GKQ+H  +I+Y     V +G++L  MY+K G
Sbjct: 388 RMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCG 447

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +     VF ++P ++ +T+  MI G  Q+G   +AL LF  ++    +PD +TFV VLS
Sbjct: 448 SLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLS 507

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+ GLV+ G   F +M  E+ I P  EHY C+ D+L R GK+ E  EF+ E     + 
Sbjct: 508 ACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFI-ESATIDHG 566

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W  LLG+CR + + EL     +KL+E+ ++ S    ++LLS+IY   G  ++V++VR
Sbjct: 567 MCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSA--YILLSSIYTALGRSDDVERVR 624

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           + M+ RG+ KE GCSWI++   V+ F   DQ HPQ  KI   L RL   M++   ++  +
Sbjct: 625 RLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFND 684

Query: 803 SN 804
           +N
Sbjct: 685 TN 686



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 239/521 (45%), Gaps = 45/521 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLK 115
           A+ +F+SIT    V WN +I G+     + Y  ++ L+ +M+  +  T  + +T+S V  
Sbjct: 64  AKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAEN--TLPNGHTFSGVFT 121

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A + +     G   H   I+  +    FV +SL+NMY      LDA              
Sbjct: 122 AASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDAR------------- 168

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFDT+  RN V+W TI+S Y       EA   F +M R         + +V  A
Sbjct: 169 -----KVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSA 223

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L+          ++ L +K G   +    V ++ + MY + GC D A K F+   +++  
Sbjct: 224 LTVPDLVHYGKQIHCLALKNGLLSIAS--VGNALVTMYGKCGCLDDAFKTFELSGDKDDI 281

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI GY Q     EA+ LF   + L+     + TF+  ++A S +  L+ G+Q+H Y
Sbjct: 282 TWSAMITGYAQAGDSHEALNLFYN-MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGY 340

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD-----DEGLMLVYEMQKQGFMID 410
            +K       I      +       +++ A  + G D     D  L     MQ +  M  
Sbjct: 341 SLKAGYECQ-IYFRKGFDYLKAKCGSLVDA--RKGFDYLKEPDIVLWTSCRMQMERIMPH 397

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
            +T+ ++L A S+L   + GKQ HA  +++G   E  + S L  MYAK G ++    +F 
Sbjct: 398 ELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFR 457

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           +  S  RD  TWNAMI+G +QNG   +A   F ++      P+ VT  +VL AC+ MG +
Sbjct: 458 RMPS--RDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLV 515

Query: 530 ELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVIN 565
           E GK       R +LD+   +        ++D+ S++G ++
Sbjct: 516 ERGK----VYFRMMLDEFGIIPRVEHYACMVDILSRAGKLH 552



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 208/497 (41%), Gaps = 68/497 (13%)

Query: 16  TATPPPPQL---PQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTV 71
           TA    P+     Q H+L+          + S L  + C+ G    AR++FD+I    TV
Sbjct: 121 TAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTV 180

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
            W TII G+    + +EA  L+  M++     + D + Y+SVL A      +  GK +HC
Sbjct: 181 SWATIISGYAMERMAFEAWELFLLMRREEG--AHDKFIYTSVLSALTVPDLVHYGKQIHC 238

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             ++        V N+L+ MY  C    DA                   K F+    ++ 
Sbjct: 239 LALKNGLLSIASVGNALVTMYGKCGCLDDA------------------FKTFELSGDKDD 280

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           + W+ +++ Y +     EA+  F  M   G +PS  +FV V  A S +G  +    ++G 
Sbjct: 281 ITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGY 340

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +K G  Y   ++      ++ A+ G    ARK FD   E +  +W +            
Sbjct: 341 SLKAG--YECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSC----------- 387

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------ 365
                    ++++ I+  ++T  S L A S L  L+ G+Q+HA  IK   +L V      
Sbjct: 388 --------RMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSAL 439

Query: 366 --------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                         +V   +  RD+++WN MIS   QNG   + L L  E++      D 
Sbjct: 440 STMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDY 499

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
           VT   +LSA S++   + GK     +L        +E Y  ++D+ +++G +   ++  E
Sbjct: 500 VTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIE 559

Query: 470 KNDSGDRDQATWNAMIA 486
            + + D     W  ++ 
Sbjct: 560 -SATIDHGMCLWRILLG 575



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 2/131 (1%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P   +   +L  C    +++ GK +H   +R     +V++  SL+++Y+K G I  A  V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERA--LSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           F  I  K+ V++  +I GY Q G    +  + LF+ M+     P+  TF  V +A S + 
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 629 LVDEGLQIFDL 639
               GLQ   L
Sbjct: 128 ETFGGLQAHAL 138


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 207/592 (34%), Positives = 323/592 (54%), Gaps = 67/592 (11%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           ++F  +S +    +LG  D A  +F +  ER+   WN+M+ G+ Q++   EA+  F  ++
Sbjct: 85  NVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA-MM 143

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------- 373
             +  V ++ TF S LSA S L +++ G Q+H+ I K+     V + +A+++        
Sbjct: 144 HKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNV 203

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       R+VVSWN++I+ + QNG   E L +   M +     D VT+ +++SA 
Sbjct: 204 NDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISAC 263

Query: 422 SNLRNQDVGKQTHAYL-----LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK------ 470
           ++L    VG++ HA +     LR+ I    + +  +DMYAK   IK AR IF+       
Sbjct: 264 ASLSAIKVGQEVHARVVKMDKLRNDII---LSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320

Query: 471 -----------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                                      +R+  +WNA+IAGYTQNG  EEA   F  +   
Sbjct: 321 IAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYSKS 561
           +V P   T A++L AC  + ++ LG Q H      GF  +   + ++FVG SLIDMY K 
Sbjct: 381 SVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +     VF K+ E++ V++  MI+G+ Q+G    AL LFR M   G +PD IT + VL
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVL 500

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SAC +AG V+EG   F  M +++ + P  +HY C+ D+LGR G + EA   ++E+  + +
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPD 560

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + IWGSLL +C++H +  L + VA+KL E++T NS P  +VLLSN+YAE G W +   V
Sbjct: 561 SV-IWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGP--YVLLSNMYAELGKWGDAMNV 617

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           RK MR+ G+ K+ GCSWI + G+ + F  KD+ HP+  +I+ +L+ L  EMR
Sbjct: 618 RKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMR 669



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 165/645 (25%), Positives = 296/645 (45%), Gaps = 115/645 (17%)

Query: 110 YSSVLKACAETRNLRIG-KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           ++ +L +C + +   I  + VH   I+   +   F+ N L++ Y+ C S  D   +  K 
Sbjct: 22  FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81

Query: 169 VEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            + +   ++ V               +F +M  R+   WN++VS + + +R  EA+  F 
Sbjct: 82  PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           MM + G   +  +F +   A S L D      ++ L+ K  S  ++D+++ S+ + MY++
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAK--SPCLSDVYIGSALVDMYSK 199

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  + A+++FD   +RN   WN++I  Y QN   VEA+++F QV+    +  D+VT  S
Sbjct: 200 CGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF-QVMLESWVEPDEVTLAS 258

Query: 336 ALSAVSQLQELDLGQQLHAYIIKN-----------------------------FVALPV- 365
            +SA + L  + +GQ++HA ++K                              F ++P+ 
Sbjct: 259 VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318

Query: 366 ----------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                                 ++   + ER+VVSWN +I+ + QNG ++E L L   ++
Sbjct: 319 NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-------SYLIDMYA 456
           ++       T   +L A ++L +  +G Q H ++L+HG  F+  E       + LIDMY 
Sbjct: 379 RESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G ++    +F K    +RD  +WNAMI G+ QNG   EA   FR+ML+    P+ +T+
Sbjct: 439 KCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITM 496

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             VL AC   G +E G+  H FS                 M    GV           P 
Sbjct: 497 IGVLSACGHAGFVEEGR--HYFS----------------SMTRDFGV----------APL 528

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++   YT M+   G+ G  E A S+   M    ++PD++ + ++L+AC     +  G  +
Sbjct: 529 RDH--YTCMVDLLGRAGFLEEAKSIIEEMP---VQPDSVIWGSLLAACKVHRNITLGKYV 583

Query: 637 FDLMQQEYKIQPSTEH-YCCVADMLGRVGKVVEAYEFVKELGEEG 680
               ++ ++++ S    Y  +++M   +GK  +A    K + +EG
Sbjct: 584 ---AEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEG 625



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 262/618 (42%), Gaps = 133/618 (21%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P+    T  S ++ + + G    A  LF S+       WN+++ GF  ++   EA
Sbjct: 77  LFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNS 147
           +  ++ M K       + YT++S L AC+   ++  G  +H    +  C S+   ++ ++
Sbjct: 137 LYYFAMMHKEGFVL--NEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDV--YIGSA 192

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L++MYS C +  DA+                  +VFD M  RNVV+WN++++ Y +    
Sbjct: 193 LVDMYSKCGNVNDAQ------------------QVFDEMGDRNVVSWNSLITCYEQNGPA 234

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           VEA++ F++ML   + P  ++  +V  A +SL   K    V+  +VK+  +  ND+ +++
Sbjct: 235 VEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKM-DKLRNDIILSN 293

Query: 268 SAIFMYAELGCFDFARKIFDN-------------------------------CLERNTEV 296
           + + MYA+      AR IFD+                                 ERN   
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVS 353

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I GY QN    EA+ LF  +L+ + +     TF + L A + L +L LG Q H ++
Sbjct: 354 WNALIAGYTQNGENEEALSLFC-LLKRESVCPTHYTFANILKACADLADLHLGMQAHVHV 412

Query: 357 IKN------------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNG 390
           +K+            FV   +I              V   ++ERD VSWN MI  F QNG
Sbjct: 413 LKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNG 472

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
             +E L L  EM   G   D +T+  +LSA             HA  +  G H      Y
Sbjct: 473 YGNEALELFREMLDSGEKPDHITMIGVLSACG-----------HAGFVEEGRH------Y 515

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
              M    G+               RD  T   M+    + G LEEA     +M    V 
Sbjct: 516 FSSMTRDFGVAPL------------RDHYT--CMVDLLGRAGFLEEAKSIIEEM---PVQ 558

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-------LIDMYSKSGV 563
           P+ V   S+L AC    NI LGK        Y+ ++   V TS       L +MY++ G 
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGK--------YVAEKLFEVETSNSGPYVLLSNMYAELGK 610

Query: 564 INYAANVFAKIPEKNSVT 581
              A NV  K+  K  VT
Sbjct: 611 WGDAMNV-RKLMRKEGVT 627



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 218/478 (45%), Gaps = 38/478 (7%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIHSL    P L    I S L  +  + G  + A+Q+FD +     V WN++I  +  N 
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNG 232

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EA+ ++  M +S  +   D  T +SV+ ACA    +++G+ VH   ++     +  +
Sbjct: 233 PAVEALKVFQVMLES--WVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDII 290

Query: 145 Y-NSLLNMYSTCLSSLDAEMV----GLKYVEVD---YSKYDLVCK------VFDTMRRRN 190
             N+ ++MY+ C    +A  +     ++ V  +    S Y +         +F  M  RN
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERN 350

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           VV+WN +++ Y +     EA+  F ++ R  + P+  +F N+  A + L D       + 
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHV 410

Query: 251 LLVKLGSEYV----NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++K G ++     +D+FV +S I MY + GC +    +F   +ER+   WN MI G+ Q
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           N +  EA+ELF ++L+  E   D +T +  LSA      ++ G+   + + ++F   P+ 
Sbjct: 471 NGYGNEALELFREMLDSGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPL- 528

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  RD   +  M+    + G  +E   ++ EM  Q    DSV   +LL+A    RN
Sbjct: 529 -------RD--HYTCMVDLLGRAGFLEEAKSIIEEMPVQP---DSVIWGSLLAACKVHRN 576

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA---RQIFEKNDSGDRDQATW 481
             +GK     L        G    L +MYA+ G    A   R++  K     +   +W
Sbjct: 577 ITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSW 634


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 201/641 (31%), Positives = 342/641 (53%), Gaps = 32/641 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD +   +  A+N ++  Y     +  A+  +R ML   + P+  +F  V  A S+L 
Sbjct: 54  QVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALA 113

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++     +G     DLFV+++ I +Y     F  A  +F     R+   WN M
Sbjct: 114 DLCAGRTIHAHAAAVGLH--TDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY  +     AI   + + +   +  +  T +S L  ++Q   L  G  +HAY ++ +
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAY 231

Query: 361 V-----------------------ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           +                            V + +  R+ V+W+ +I  FV      E   
Sbjct: 232 LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFN 291

Query: 398 LVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
           L  +M  +G   + + +V + L   ++L +  +G Q HA L + GIH +    + L+ MY
Sbjct: 292 LFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMY 351

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK+GLI  A  +F+  +   +D  ++ A+++GY QNG  EEAF+ F++M   NV P++ T
Sbjct: 352 AKAGLINEATMLFD--EIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIAT 409

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S++PAC+ +  ++ G+  HG  I   L     +  SLIDMY+K G I+ +  VF K+P
Sbjct: 410 MVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMP 469

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ V++ TMI GYG HG+ + A +LF SMK  G EPD +TF+ +++ACS++GLV EG  
Sbjct: 470 ARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKH 529

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            FD M  +Y I P  EHY C+ D+L R G + EAY+F++ +  + +V  +WG+LLG+CR+
Sbjct: 530 WFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV-RVWGALLGACRI 588

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + +L + V++ + ++    +  G  VLLSNI++  G ++   +VR   + +G +K  G
Sbjct: 589 HKNIDLGKQVSRMIQKLGPEGT--GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPG 646

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSWI++ G ++ F   DQ HP S  IY  L+ + ++++  G
Sbjct: 647 CSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLG 687



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 162/619 (26%), Positives = 279/619 (45%), Gaps = 66/619 (10%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTSCDNYT 109
            G+  LARQ+FD I  P    +N +I  +      + AI LY  M   +  P    + YT
Sbjct: 46  RGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPP----NKYT 101

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  VLKAC+   +L  G+ +H H      +   FV  +L+++Y  C              
Sbjct: 102 FPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRC-------------- 147

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTIS 228
               +++     VF  M  R+VVAWN +++ Y     Y  A+     M  R G+RP+  +
Sbjct: 148 ----ARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNAST 203

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN----DLFVASSAIFMYAELGCFDFARK 284
            V++ P L+  G       V+   ++    Y++     + + ++ + MYA+     +A +
Sbjct: 204 LVSLLPLLAQHGALFQGTSVHAYCLR---AYLDQNEEQVLIGTALLDMYAKCKHLVYACR 260

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F     RN   W+ +IGG+V  +   EA  LF  +L          +  SAL   + L 
Sbjct: 261 VFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLA 320

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
           +L +G QLHA + K+ +   +   N+++                     +D +S+  ++S
Sbjct: 321 DLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLS 380

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +VQNG  +E  ++  +MQ      D  T+ +L+ A S+L     G+ +H  ++  G+  
Sbjct: 381 GYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLAL 440

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           E  + + LIDMYAK G I  +RQ+F+K  +  RD  +WN MIAGY  +GL +EA   F  
Sbjct: 441 ETSICNSLIDMYAKCGRIDLSRQVFDKMPA--RDIVSWNTMIAGYGIHGLGKEATTLFLS 498

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-----LHGFSIRYLLDQNVFVGTSLIDMY 558
           M      P+ VT   ++ AC+  G +  GK       H + I   ++  +     ++D+ 
Sbjct: 499 MKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYI----CMVDLL 554

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSERALSLFRSMKGCGIEPDAITF 617
           ++ G ++ A      +P K  V     +LG  + H   +    + R ++  G E     F
Sbjct: 555 ARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTG-NF 613

Query: 618 VAVLSACSYAGLVDEGLQI 636
           V + +  S AG  DE  ++
Sbjct: 614 VLLSNIFSAAGRFDEAAEV 632



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L+T    S +    + GR  L+RQ+FD +     V WNT+I G+  + L  EA  L+  M
Sbjct: 440 LETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSM 499

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           K        D+ T+  ++ AC+ +  +  GK
Sbjct: 500 KNQG--FEPDDVTFICLIAACSHSGLVTEGK 528



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%)

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           ++ +   G +  A  VF +IP  ++  Y  +I  Y   G    A+ L+RSM    + P+ 
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 615 ITFVAVLSACS 625
            TF  VL ACS
Sbjct: 100 YTFPFVLKACS 110


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 232/740 (31%), Positives = 383/740 (51%), Gaps = 109/740 (14%)

Query: 105 CDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           C N    SV K+     N R   + VHC  I+     S ++ N+L+N+YS    +L A  
Sbjct: 16  CTNLLQKSVNKS-----NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70

Query: 164 V----------GLKYVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           +              V   YSK    D  C+ FD + +R+ V+W T++  Y    +Y +A
Sbjct: 71  LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +R    M++ GI P+  +  NV  ++++    ++   V+  +VKLG     ++ V++S +
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR--GNVSVSNSLL 188

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+ G    A+ +FD  + R+   WN MI              L +QV ++D      
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA-------------LHMQVGQMD------ 229

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
                   A++Q +++                          ERD+V+WN+MIS F Q G
Sbjct: 230 -------LAMAQFEQM-------------------------AERDIVTWNSMISGFNQRG 257

Query: 391 LDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME- 448
            D   L +  +M +   +  D  T+ ++LSA +NL    +GKQ H++++  G    G+  
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGD-------------------------------RD 477
           + LI MY++ G ++TAR++ E+  + D                               RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              W AMI GY Q+G   EA   FR M+     PN  T+A++L   + + ++  GKQ+HG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
            +++     +V V  +LI MY+K+G I  A+  F  I  E+++V++T+MI+   QHG +E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL LF +M   G+ PD IT+V V SAC++AGLV++G Q FD+M+   KI P+  HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+ GR G + EA EF++++  E +V+  WGSLL +CR+H + +L +V A++LL ++  N
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S  G +  L+N+Y+  G WE   K+RK M++  ++KE G SWI+V   V+ F  +D  HP
Sbjct: 617 S--GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           + ++IY  ++++  E++  G
Sbjct: 675 EKNEIYMTMKKIWDEIKKMG 694



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 202/441 (45%), Gaps = 35/441 (7%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G+  LA   F+ +     V WN++I GF        A+ ++S+M + S   S D +T 
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS-LLSPDRFTL 282

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------------LSS 158
           +SVL ACA    L IGK +H H +    + S  V N+L++MYS C              +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342

Query: 159 LDAEMVGLKYVEVDYSKY---DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            D ++ G   +   Y K    +    +F +++ R+VVAW  ++  Y +   Y EA+  FR
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M+  G RP++ +   +    SSL        ++G  VK G  Y   + V+++ I MYA+
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY--SVSVSNALITMYAK 460

Query: 276 LGCFDFARKIFD--NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            G    A + FD   C ER+T  W +MI    Q+ H  EA+ELF  +L ++ +  D +T+
Sbjct: 461 AGNITSASRAFDLIRC-ERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRPDHITY 518

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           +   SA +    ++ G+Q    +      +P +            +  M+  F + GL  
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL----------SHYACMVDLFGRAGLLQ 568

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E    + +M  +    D VT  +LLSA    +N D+GK     LL       G  S L +
Sbjct: 569 EAQEFIEKMPIEP---DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625

Query: 454 MYAKSGLIKTARQIFEKNDSG 474
           +Y+  G  + A +I +    G
Sbjct: 626 LYSACGKWEEAAKIRKSMKDG 646



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 242/596 (40%), Gaps = 114/596 (19%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G      + FD + +  +V W T+I+G+      ++AI +   M K     + 
Sbjct: 87  LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT- 145

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
             +T ++VL + A TR +  GK VH   ++     +  V NSLLNMY+ C   + A+ V 
Sbjct: 146 -QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204

Query: 166 LKYVEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            + V  D S +             DL    F+ M  R++V WN+++S + +    + A+ 
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264

Query: 213 QFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
            F  MLR   + P   +  +V  A ++L        ++  +V  G +      V ++ I 
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IVLNALIS 322

Query: 272 MYAELGCFDFARK---------------------------------IFDNCLERNTEVWN 298
           MY+  G  + AR+                                 IF +  +R+   W 
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY Q+    EAI LF  ++   +   +  T  + LS  S L  L  G+Q+H   +K
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRP-NSYTLAAMLSVASSLASLSHGKQIHGSAVK 441

Query: 359 NFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +     V V NA+I                     ERD VSW +MI A  Q+G  +E L 
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L   M  +G   D +T   + SA            THA                      
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSAC-----------THA---------------------- 528

Query: 458 SGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
            GL+   RQ F+     D+   T   +  M+  + + GLL+EA     +M    + P+VV
Sbjct: 529 -GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVV 584

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           T  S+L AC    NI+LGK +    +  L  +N    ++L ++YS  G    AA +
Sbjct: 585 TWGSLLSACRVHKNIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKI 639



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 21/205 (10%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           LK     + L    + G  + A+ +F S+     V W  +I+G+  +    EAI L+  M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
                    ++YT +++L   +   +L  GK +H   ++     S  V N+L+ MY+   
Sbjct: 405 VGGGQRP--NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           +   A                   + FD +R  R+ V+W +++    +     EA+  F 
Sbjct: 463 NITSAS------------------RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            ML  G+RP  I++V VF A +  G
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAG 529


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 241/765 (31%), Positives = 399/765 (52%), Gaps = 71/765 (9%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           LFD    P    +N +++ ++  +  ++++  +    +     + D +T    LKAC   
Sbjct: 29  LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGF 88

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
              ++G+ +H   I         V NSL+NMY  C S                 + +   
Sbjct: 89  P--KLGRQIHGFVISSGFVSHITVSNSLMNMY--CKSG----------------QLERAF 128

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VF  +   ++V+WNTI+S + K+E  +      RM L  G++  ++++           
Sbjct: 129 SVFQNLHDPDIVSWNTILSGFEKSENALSFA--LRMNLN-GVKFDSVTYTTALSFCLDGE 185

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           ++     ++ L +K G  +  D+FV ++ + MY+       ARK+FD    R+   W+ M
Sbjct: 186 EFLFGWQLHTLALKCG--FKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAM 243

Query: 301 IGGYVQ-NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           I GY Q  ++ ++AI +FVQ++  + + FD+V    ALS     + L+LG+Q+H   +K 
Sbjct: 244 ITGYAQEGDNGLQAILVFVQMVR-EGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKT 302

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
                  V N +I                    +R+V+SW TMIS +     ++  + L 
Sbjct: 303 GHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLF 357

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
            +M+  G   + VT   LL A + +RN  + G   H   ++     E  + + LI MYAK
Sbjct: 358 NKMRLDGVYPNDVTFIGLLHAIT-IRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAK 416

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF-RQMLEHNVTPNVVTI 516
              ++ A ++F +     R+  +WNA+I+GY QN L +EA  AF   ++E+   PN  T 
Sbjct: 417 FEFMQDASRVFIELPY--REIISWNALISGYAQNALCQEALEAFLYAIMEYK--PNEYTF 472

Query: 517 ASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            SVL A +   +I L  G++ H   I+  L+ +  +  +L+DMY+K G I  +  VF + 
Sbjct: 473 GSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNET 532

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            +++   +T +I GY QHG  E  + LF  M+   I+PDA+ F++VL+ACS   +VD G 
Sbjct: 533 SKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGR 592

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           Q F++M +++ I+P  EHY C+ DMLGR G++ EA E +  +   G  +    SLLG+CR
Sbjct: 593 QFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARI-PGGPGVSALQSLLGACR 651

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            HG+ E+AE +A  L++ +   S P  +VL+SN+YA++G+WE V KVRKEMRERG+ KE+
Sbjct: 652 THGNVEMAERIANDLMKKEPLESGP--YVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEI 709

Query: 755 GCSWIDVGG------YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           G SW+DVG       Y++ F+S D  HPQS +I+ M + +  EM+
Sbjct: 710 GFSWVDVGNFGASNLYLHGFSSGDVSHPQSEEIFRMAKYMGAEMK 754



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 157/613 (25%), Positives = 289/613 (47%), Gaps = 76/613 (12%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P    QIH        +   T+ + L  + C+ G+   A  +F ++  P  V WNTI+ G
Sbjct: 89  PKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSG 148

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           F       E  L ++ ++ +      D+ TY++ L  C +      G  +H   ++C   
Sbjct: 149 FE----KSENALSFA-LRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFK 203

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              FV N+L+ MYS     +DA                   KVFD M  R+ V+W+ +++
Sbjct: 204 GDVFVGNALVTMYSRWEHLVDAR------------------KVFDEMPSRDRVSWSAMIT 245

Query: 200 WYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV---VYGLLVKL 255
            Y +  +  ++A+  F  M+R G++   +       ALS  G  ++ ++   ++ L VK 
Sbjct: 246 GYAQEGDNGLQAILVFVQMVREGVKFDNVPITG---ALSVCGHERNLELGKQIHCLAVKT 302

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G E      V +  I  Y++    + A+ +F+   +RN   W TMI  Y +      A+ 
Sbjct: 303 GHETHTS--VGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEG-----AVS 355

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-- 373
           LF + + LD +  +DVTF+  L A++    ++ G  +H   IK      + V N++I   
Sbjct: 356 LFNK-MRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMY 414

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGL-MLVYEMQKQGFMIDSVTV 414
                             R+++SWN +IS + QN L  E L   +Y + +  +  +  T 
Sbjct: 415 AKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIME--YKPNEYTF 472

Query: 415 TALLSAASNLRNQDV----GKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFE 469
            ++L+A S    +D+    G++ H++L++ G++ + + S  L+DMYAK G I+ ++++F 
Sbjct: 473 GSVLNAIS--AGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVF- 529

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
            N++  + Q  W A+I+GY Q+G  E     F +M +  + P+ V   SVL AC+    +
Sbjct: 530 -NETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMV 588

Query: 530 ELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++G+Q     I+ ++++      + ++DM  ++G +  A  + A+IP    V+    +LG
Sbjct: 589 DMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLG 648

Query: 589 ----YGQHGMSER 597
               +G   M+ER
Sbjct: 649 ACRTHGNVEMAER 661


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 208/600 (34%), Positives = 333/600 (55%), Gaps = 35/600 (5%)

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP + +F    P + +     SA  ++   ++LG  + N +F + S +  Y   G    
Sbjct: 65  LRPDSFTFP---PLVRAAPGPASAAQLHACALRLGLLHPN-VFASGSLVHAYLRFGRVAE 120

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A ++FD   ER+   WN M+ G  +N    +A+ L  +++  + +  D VT  S L    
Sbjct: 121 AYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVG-EGVAGDAVTLSSVLPMCV 179

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L +  L   +H Y +K+ ++  + V NA+I+                    RD+V+WN+
Sbjct: 180 VLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNS 239

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +ISA  Q G     + L + M + G   D +T+ +L SA +   ++   K  H Y+ R G
Sbjct: 240 IISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG 299

Query: 442 IHFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
                +   + ++DMYAK   I  A+++F+  +  DRD  +WN +I GY QNGL  EA  
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFD--NLPDRDVVSWNTLITGYMQNGLANEAIR 357

Query: 500 AFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            +  M  H  + P   T  SVLPA + +G ++ G ++H  SI+  L+ +V+V T LID+Y
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLY 417

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           +K G +  A  +F  +P +++  +  +I G G HG   +ALSLF  M+   I+PD +TFV
Sbjct: 418 AKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           ++L+ACS+AGLVD+G   FDLMQ  Y I P  +HY C+ DMLGR G++ EA+EF++ +  
Sbjct: 478 SLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPI 537

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           + +   +WG+LLG+CR+HG+ E+ +V ++ L E+D  N   GY+VL+SN+YA+ G W+ V
Sbjct: 538 KPDS-AVWGALLGACRIHGNVEMGKVASQNLFELDPENV--GYYVLMSNMYAKIGKWDGV 594

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE--HPQSHKIYEMLERLAMEMRNAG 796
           D VR  +R + L+K  G S ++V G V+ F S  Q   HPQ  +I   L  L  +M++AG
Sbjct: 595 DAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAG 654



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 267/592 (45%), Gaps = 84/592 (14%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD M  R+V AWN ++S   +  R  +AV     M+  G+    ++  +V P    LG
Sbjct: 123 RVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLG 182

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D   A V++   VK G     +LFV ++ I +Y +LG    A  +F     R+   WN++
Sbjct: 183 DRALALVMHVYAVKHGLS--GELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSI 240

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI-IKN 359
           I    Q      A+ELF  ++E   +  D +T +S  SAV+Q  +    + +H Y+  + 
Sbjct: 241 ISANEQGGKVAAAVELFHGMME-SGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRG 299

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
           +    +I  NA++                    +RDVVSWNT+I+ ++QNGL +E + + 
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIY 359

Query: 400 YEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAK 457
            +M   +G      T  ++L A S L     G + HA  ++ G++ +  + + LID+YAK
Sbjct: 360 NDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAK 419

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G +  A  +FE      R    WNA+IAG   +G   +A   F QM +  + P+ VT  
Sbjct: 420 CGKLVEAMFLFEHMPR--RSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           S+L AC+  G               L+DQ    G S  D+            V+  +P  
Sbjct: 478 SLLAACSHAG---------------LVDQ----GRSFFDLMQ---------TVYGIVPIA 509

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
               YT M+   G+ G  + A    +SM    I+PD+  + A+L AC   G V+ G    
Sbjct: 510 KH--YTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGACRIHGNVEMGKVA- 563

Query: 638 DLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV--------LEIWGS 688
              Q  +++ P +  +Y  +++M  ++GK  +  + V+ L    N+        +E+ GS
Sbjct: 564 --SQNLFELDPENVGYYVLMSNMYAKIGK-WDGVDAVRSLVRRQNLQKTPGWSSMEVKGS 620

Query: 689 LLGSCRLHG--------HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  S    G        H E+   +   L +M +   +P Y  +L ++  +E
Sbjct: 621 V--SVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVEEDE 670



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 161/643 (25%), Positives = 270/643 (41%), Gaps = 98/643 (15%)

Query: 12  PPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRP 68
           PP   A P P    Q+H+ +  +  L  P + +  S +    + GR   A ++FD +   
Sbjct: 73  PPLVRAAPGPASAAQLHACALRL-GLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPER 131

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
               WN ++ G   N    +A+ L  +M       + D  T SSVL  C    +  +   
Sbjct: 132 DVPAWNAMLSGLCRNTRAADAVTLLGRMVGEG--VAGDAVTLSSVLPMCVVLGDRALALV 189

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           +H + ++   +   FV N+L+++Y       +A                    VF  M  
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHW------------------VFGGMAL 231

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R++V WN+I+S   +  +   AV  F  M+  G+ P  ++ V++  A++  GD   A  V
Sbjct: 232 RDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSV 291

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +  + + G + V D+   ++ + MYA++   D A+K+FDN  +R+   WNT+I GY+QN 
Sbjct: 292 HCYVRRRGWD-VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNG 350

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              EAI ++  +   + +     TF+S L A S L  L  G ++HA  IK  + L V V 
Sbjct: 351 LANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVT 410

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
             +I+                    R    WN +I+    +G   + L L  +MQ++   
Sbjct: 411 TCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIK 470

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
            D VT  +LL+A S           HA L+  G       S+   M    G++  A+   
Sbjct: 471 PDHVTFVSLLAACS-----------HAGLVDQG------RSFFDLMQTVYGIVPIAKH-- 511

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                       +  M+    + G L+EAF   + M    + P+     ++L AC   GN
Sbjct: 512 ------------YTCMVDMLGRAGQLDEAFEFIQSM---PIKPDSAVWGALLGACRIHGN 556

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN---------- 578
           +E+GK +   ++  L  +NV     + +MY+K G  +    V + +  +N          
Sbjct: 557 VEMGK-VASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615

Query: 579 ------SVTYT-TMILGYGQHGMSERAL-SLFRSMKGCGIEPD 613
                 SV Y+ T    + QH   +R L  L   MK  G  PD
Sbjct: 616 EVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPD 658


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 209/610 (34%), Positives = 331/610 (54%), Gaps = 61/610 (10%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF +++  N ++WNT++  +  +   + A+  +  M+ +G+ P++ +F  +F + +    
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    ++  ++K G     DL V +S I MYA+ G  + A K+FD    R+   +  MI
Sbjct: 94  AQEGKQIHAQILKYG--LTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMI 151

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY    +  +A ++F      DEI                                   
Sbjct: 152 TGYASRGNMDKAQKMF------DEI----------------------------------- 170

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
             P+        +DVVSWN MIS + + G   E L L  EM K     D  T+  +LS  
Sbjct: 171 --PI--------KDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTC 220

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           ++  N ++G+Q H+++  HG      + + LID+Y+K G ++ A  +FE      +D  +
Sbjct: 221 THSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY--KDVIS 278

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN +I GY      +EA + F++ML+   TPN VT+ S+LPAC  +G I++G+ +H +  
Sbjct: 279 WNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 338

Query: 541 RYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           + L  +  N  + TSLIDMY+K G I  A  VF  I  K+  +   MI G+  HG ++ A
Sbjct: 339 KKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAA 398

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
             L   MK  GIEPD ITFV +LSACS+AGL D G +IF  M  +Y+I+P  EHY C+ D
Sbjct: 399 FDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMID 458

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G   EA E +  +  E + + IWGSLL +C++H + EL E++A+KL++++ +N  
Sbjct: 459 LLGRSGLFKEAEELINSMTMEPDGV-IWGSLLKACKIHKNLELGELIAQKLMKIEPKN-- 515

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
           PG +VLLSNIYA    W++V +VR  + ++GL+K  GCS I++   V+ F   D+ HPQ+
Sbjct: 516 PGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQN 575

Query: 779 HKIYEMLERL 788
            +IY+MLE +
Sbjct: 576 KEIYKMLEEI 585



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 231/519 (44%), Gaps = 79/519 (15%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
            G P+ A  +F SI  P  + WNT+I G   ++ P  A+ LY  M   S   S ++YT+ 
Sbjct: 26  HGLPY-AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYM--ISLGLSPNSYTFP 82

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            + K+CA+++  + GK +H   ++        V+ SL++MY+      DA  V       
Sbjct: 83  FLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHR 142

Query: 172 DYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y             D   K+FD +  ++VV+WN ++S Y +  RY EA+  F  M+
Sbjct: 143 DVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMM 202

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +M ++P   +   V    +  G+ +    ++  +   G  + ++L + ++ I +Y++ G 
Sbjct: 203 KMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG--FGSNLKLVNALIDLYSKCGE 260

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F+    ++   WNT+IGGY   NH  EA+ +F ++L+L E   +DVT LS L 
Sbjct: 261 MERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETP-NDVTMLSILP 319

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPV----------------------IVLNAVIERDV 376
           A + L  +D+G+ +H YI K    +                         V + ++ + +
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            S N MI  F  +G  D    L+  M+K G   D +T   LLSA S+    D+G++    
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS 439

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +         +E Y  +ID+  +SGL K A ++              N+M          
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELI-------------NSM---------- 476

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                         + P+ V   S+L AC    N+ELG+
Sbjct: 477 -------------TMEPDGVIWGSLLKACKIHKNLELGE 502



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 170/343 (49%), Gaps = 33/343 (9%)

Query: 360 FVALP--VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           F  LP  + V  ++ E + +SWNTMI     +      L L   M   G   +S T   L
Sbjct: 25  FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD- 475
             + +  +    GKQ HA +L++G+  +  + + LI MYA++G+++ A ++F+ +   D 
Sbjct: 85  FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144

Query: 476 ----------------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                                       +D  +WNAMI+GY + G  +EA   F +M++ 
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +V P+  T+A+VL  C   GN+ELG+Q+H +   +    N+ +  +LID+YSK G +  A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F  +  K+ +++ T+I GY      + AL +F+ M   G  P+ +T +++L AC++ 
Sbjct: 265 HGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324

Query: 628 GLVDEGLQIFDLMQQEYK-IQPSTEHYCCVADMLGRVGKVVEA 669
           G +D G  I   + ++ K I  +T     + DM  + G +  A
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAA 367



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 34/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++FD I     V WN +I G+       EA+ L+++M K       D  T ++VL  C
Sbjct: 163 AQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD--VKPDESTMATVLSTC 220

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             + N+ +G+ +H          +  + N+L+++YS C      EM             +
Sbjct: 221 THSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC-----GEM-------------E 262

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F+ ++ ++V++WNT++  Y     + EA+  F+ ML++G  P+ ++ +++ PA +
Sbjct: 263 RAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACA 322

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K     + +  + +S I MYA+ G  + A ++FD  L ++    
Sbjct: 323 HLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSC 382

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  +     A +L  + ++ D I  DD+TF+  LSA S     DLG+++     
Sbjct: 383 NAMIFGFAMHGRADAAFDLLSR-MKKDGIEPDDITFVGLLSACSHAGLSDLGRKI----- 436

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                   + L+  IE  +  +  MI    ++GL  E   L+  M  +    D V   +L
Sbjct: 437 -----FKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEP---DGVIWGSL 488

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L A    +N ++G+     L++      G    L ++YA S 
Sbjct: 489 LKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSA 530


>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 207/635 (32%), Positives = 336/635 (52%), Gaps = 69/635 (10%)

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           +S +    ++S L   +S  V+ GL+      + +   +A  AI  + +L   D+   I 
Sbjct: 10  LSLLEKCKSISQLKQIQSQMVLTGLI---EDGFASSRLIAFCAISEWRDL---DYCTNIL 63

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
            N    NT  WN  I G++ + +P EA+ L+ +VL+ D    D+ T+     A ++L  +
Sbjct: 64  FNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLI 123

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
            +G ++  +++       + V NAVI                     RD+VSWN+MI+ +
Sbjct: 124 RMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGY 183

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
           V+ G   E L    EM+ +G   D VT+  ++S+ + L + D+G+++H Y+  +G+    
Sbjct: 184 VRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTV 243

Query: 446 GMESYLIDMYAKSGLIKTARQIFEK-----------------------------NDSGDR 476
            + + L+DMY K G +++AR++F+                              ++  D+
Sbjct: 244 PLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDK 303

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D   WNAMI GY      +EA   F +M   N+ P+ VT+ S L AC+ +G +++G  +H
Sbjct: 304 DVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIH 363

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            +  ++ L  NV +GT+LIDMY+K G I  A  VF ++P +NS+T+T +I G   HG + 
Sbjct: 364 HYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAH 423

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            A++ F  M    + PD +TF+ +LSAC + GLV+EG + F  M  ++ + P  +HY C+
Sbjct: 424 GAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCM 483

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+LGR G + EA E +K +  E + + +WG+L  +CR+HG+  + E  A KLL+MD  +
Sbjct: 484 VDLLGRAGLLEEAEELIKSMPIEADAV-VWGALFFACRIHGNVLMGERAASKLLQMDPHD 542

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S  G +VLL+N+Y E   W+   K RK MR+RG+ K  GCS I+V G V  F  +D+ HP
Sbjct: 543 S--GIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHP 600

Query: 777 QSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRF 811
           QS +IYE L +L          T Q   V+ TP F
Sbjct: 601 QSEQIYECLIQL----------TRQLELVECTPVF 625



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 242/551 (43%), Gaps = 94/551 (17%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKIC--QEGRP--HLARQLFDSITRPTTVIWNTIII 78
           QL QI S       ++     SRL   C   E R   +    LF++   P T  WN  I 
Sbjct: 21  QLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNT-RNPNTFSWNVAIR 79

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
           GF+ +  P EA++LY ++ +    T  DNYTY  + KACA    +R+G  +  H +    
Sbjct: 80  GFLDSENPREAVVLYKRVLQCDG-TKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF 138

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
           +   FV N+++++  +C                     D   K+FD    R++V+WN+++
Sbjct: 139 DSDIFVSNAVIHLLVSC------------------GDLDGARKMFDKSCVRDLVSWNSMI 180

Query: 199 SWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK--------------- 243
           + YV+     EA+  +R M   GI+P  ++ + V  + + L D                 
Sbjct: 181 NGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLK 240

Query: 244 ----SADVVYGLLVKLGS-EYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNC 289
                A+ +  + +K G+ E    LF +         ++ +  YA+ G  D A K+FD  
Sbjct: 241 LTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEM 300

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +++   WN MIGGYV  N   EA+ LF ++  ++ I  D+VT +S LSA SQL  LD+G
Sbjct: 301 PDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQLGALDVG 359

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
             +H YI K+ ++L V +  A+I+                    R+ ++W  +IS    +
Sbjct: 360 IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALH 419

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL---------LRH 440
           G     +    EM     M D VT   LLSA  +    + G++  + +         L+H
Sbjct: 420 GNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKH 479

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG---LLEEA 497
                   S ++D+  ++GL++ A ++  K+   + D   W A+      +G   + E A
Sbjct: 480 -------YSCMVDLLGRAGLLEEAEELI-KSMPIEADAVVWGALFFACRIHGNVLMGERA 531

Query: 498 FVAFRQMLEHN 508
                QM  H+
Sbjct: 532 ASKLLQMDPHD 542



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 190/420 (45%), Gaps = 31/420 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD       V WN++I G+V     YEA+  Y +MK        D  T   V+ +C
Sbjct: 161 ARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEG--IKPDEVTMIGVVSSC 218

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL----------SSLDAEMVGLK 167
           A+  +L +G+  HC+        +  + N+L++MY  C           S  +  MV   
Sbjct: 219 AQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWT 278

Query: 168 YVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            + V Y++    D+  K+FD M  ++VV WN ++  YV   R  EA+  F  M  M I P
Sbjct: 279 TMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINP 338

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             ++ V+   A S LG       ++  + K   E   ++ + ++ I MYA+ G    A +
Sbjct: 339 DEVTMVSCLSACSQLGALDVGIWIHHYIEK--HELSLNVALGTALIDMYAKCGKITKAIQ 396

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F     RN+  W  +I G   + +   AI  F ++++ + ++ D+VTFL  LSA     
Sbjct: 397 VFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMID-NSVMPDEVTFLGLLSACCHGG 455

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            ++ G++  + +   F   P           +  ++ M+    + GL +E   L+  M  
Sbjct: 456 LVEEGRKYFSQMSSKFNLSP----------KLKHYSCMVDLLGRAGLLEEAEELIKSMPI 505

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           +    D+V   AL  A     N  +G++  + LL+   H  G+   L +MY ++ + K A
Sbjct: 506 EA---DAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEA 562


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 215/641 (33%), Positives = 339/641 (52%), Gaps = 32/641 (4%)

Query: 181  KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            K+F   +  N+ AWN  ++ ++   + V A+  F+ +LR  I   +++ V +  A     
Sbjct: 849  KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGAD 908

Query: 241  DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            D    + ++ L++K  S +   + V++S + MY++ G    A K F N  E +   WNTM
Sbjct: 909  DLDLGEQIHALVIK--SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTM 966

Query: 301  IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE---LDLGQQLHAYII 357
            I  Y QNN  +EAI  F  +L  D +  D  T  S L A S   E     LG Q+H Y I
Sbjct: 967  ISSYAQNNLEMEAICTFRDLLR-DGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAI 1025

Query: 358  K------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
            K      +FV+  +I              +L+   + D+ SWN ++  ++++    + L 
Sbjct: 1026 KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALE 1085

Query: 398  LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
                M + G  ID +T+   + A+  L N   GKQ  AY ++ G + +  + S ++DMY 
Sbjct: 1086 HFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYI 1145

Query: 457  KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            K G +  A ++F   +    D+  W  MI+GY +NG  + A   +  M    V P+  T 
Sbjct: 1146 KCGDMPNALELF--GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203

Query: 517  ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            A+++ A + +  +E GKQ+H   ++     + FVGTSL+DMY K G +  A  VF K+  
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263

Query: 577  KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +  V +  M+LG  QHG  + AL+LFR+M+  GI+PD +TF+ VLSACS++GL  E  + 
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323

Query: 637  FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
            FD M + Y I P  EHY C+ D LGR G++ EA   +  +  + +   ++ +LLG+CR  
Sbjct: 1324 FDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASA-SMYRALLGACRTK 1382

Query: 697  GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            G +E A+ VA KLL +D  +S    +VLLSNIYA    W++V   R  M+ + ++K+ G 
Sbjct: 1383 GDAETAKRVADKLLALDPSDSSA--YVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGF 1440

Query: 757  SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
            SWIDV   V+ F   D+ HPQ+  IYE +E L   +R  G+
Sbjct: 1441 SWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGS 1481



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 187/697 (26%), Positives = 323/697 (46%), Gaps = 100/697 (14%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAIL----LYSQ 95
            T+ S+   +C       ARQ+FD  +    V WN+I+  +    +  YE +L    L+  
Sbjct: 654  TMYSKCGSLCS------ARQVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGL 707

Query: 96   MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
            +++     S    T + +LK C  +  +++ + VH + ++       FV  +L+N+Y  C
Sbjct: 708  LREFG--FSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIY--C 763

Query: 156  LSSLDAEMVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                               KY LV +   +FD M  R+ V WN ++  YV+     EA+R
Sbjct: 764  -------------------KYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 213  QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
             F    R G  P                D+ +   V G    + S+  N+    +  +  
Sbjct: 805  FFSAFHRSGFXP----------------DFSNLHCVIG---GVNSDVSNNRKRHAEQVKA 845

Query: 273  YA-ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
            YA ++  FD    IF          WN  +  ++     V AI+ F  +L    I  D V
Sbjct: 846  YAMKMFPFDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLR-STIGHDSV 895

Query: 332  TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------- 372
            T +  LSA     +LDLG+Q+HA +IK+  A  V V N+++                   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 373  -ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD--- 428
             E D++SWNTMIS++ QN L+ E +    ++ + G   D  T+ ++L A S     +   
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 429  VGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            +G Q H Y ++ GI  +  + + LID+Y+K G +  A   F  +   D D A+WNA++ G
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAE--FLLHGKYDFDLASWNAIMFG 1073

Query: 488  YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
            Y ++    +A   F  M E  +  + +T+A+ + A   + N++ GKQ+  ++I+   + +
Sbjct: 1074 YIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNND 1133

Query: 548  VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
            ++V + ++DMY K G +  A  +F +I   + V +TTMI GY ++G  + ALS++  M+ 
Sbjct: 1134 LWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRV 1193

Query: 608  CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGK 665
             G++PD  TF  ++ A S    +++G QI        K+  S +H+    + DM  + G 
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIH---ANVVKLDYSLDHFVGTSLVDMYCKCGS 1250

Query: 666  VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            V +AY   +++     V   W ++L     HGH + A
Sbjct: 1251 VQDAYRVFRKMDVRKVVF--WNAMLLGLAQHGHVDEA 1285



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 270/582 (46%), Gaps = 48/582 (8%)

Query: 122  NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            +L++GK  H   +     P R++ N+L+ MYS C S   A                   +
Sbjct: 626  DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSAR------------------Q 667

Query: 182  VFDTMRRRNVVAWNTIVSWYVK-----TERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            VFD    R++V WN+I++ Y +      E  +E  R F ++   G   + ++   +    
Sbjct: 668  VFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLC 727

Query: 237  SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
               G  + ++ V+G  VK+G E   DLFV+ + + +Y + G    AR +FD   ER+  +
Sbjct: 728  LLSGFVQVSETVHGYAVKIGFEL--DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVL 785

Query: 297  WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
            WN M+  YV+N+   EA+  F           D       +  V+   ++   ++ HA  
Sbjct: 786  WNVMLKAYVENSFQDEALRFF-SAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQ 842

Query: 357  IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            +K + A+ +   +     ++ +WN  ++ F+  G     +     + +     DSVT+  
Sbjct: 843  VKAY-AMKMFPFDQ--GSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899

Query: 417  LLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            +LSAA    + D+G+Q HA +++        + + L++MY+K+G++  A + F   +S +
Sbjct: 900  ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI--NSPE 957

Query: 476  RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE---LG 532
             D  +WN MI+ Y QN L  EA   FR +L   + P+  T+ASVL AC+     E   LG
Sbjct: 958  LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017

Query: 533  KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
             Q+H ++I+  +  + FV T+LID+YSK G ++ A  +     + +  ++  ++ GY + 
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077

Query: 593  GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
              S +AL  F  M   GI  D IT    + A      + +G QI     Q Y I+    +
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI-----QAYAIKLGFNN 1132

Query: 653  YCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
               V+    DM  + G +  A E   E+     V   W +++
Sbjct: 1133 DLWVSSGVLDMYIKCGDMPNALELFGEISRPDEV--AWTTMI 1172



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 212/471 (45%), Gaps = 55/471 (11%)

Query: 26   QIHSL---SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
            QIH+L   S   P +  P   S ++   + G  + A + F +      + WNT+I  +  
Sbjct: 915  QIHALVIKSSFAPVV--PVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972

Query: 83   NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA---ETRNLRIGKAVHCHFIRCFSN 139
            NNL  EAI  +  + +       D +T +SVL+AC+   E     +G  VH + I+C   
Sbjct: 973  NNLEMEAICTFRDLLRDG--LKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGII 1030

Query: 140  PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
               FV  +L+++YS      +AE +        + KYD            ++ +WN I+ 
Sbjct: 1031 NDSFVSTALIDLYSKGGKMDEAEFLL-------HGKYDF-----------DLASWNAIMF 1072

Query: 200  WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
             Y+K+ +  +A+  F +M  MGI    I+      A   L + K    +    +KLG  +
Sbjct: 1073 GYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG--F 1130

Query: 260  VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             NDL+V+S  + MY + G    A ++F      +   W TMI GY++N     A+ ++  
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVY-H 1189

Query: 320  VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------- 366
            ++ +  +  D+ TF + + A S L  L+ G+Q+HA ++K      +FV   ++       
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG 1249

Query: 367  -------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                   V   +  R VV WN M+    Q+G  DE L L   MQ  G   D VT   +LS
Sbjct: 1250 SVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLS 1309

Query: 420  AASNLR-NQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
            A S+     +  K   A    +GI  E +E Y  L+D   ++G I+ A  +
Sbjct: 1310 ACSHSGLFSEAYKYFDAMFKTYGITPE-IEHYSCLVDALGRAGRIQEAENV 1359


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 246/789 (31%), Positives = 395/789 (50%), Gaps = 79/789 (10%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+    +  + +S  C+ G    AR L   +     V WNT+I     ++ P EA+ +Y
Sbjct: 71  LPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMY 130

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M +     +  N+T +SVL AC     L  G+  H   ++   + ++FV N LL MY+
Sbjct: 131 RGMLQEGLAPT--NFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYT 188

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C S  DA                   ++FD M   N V++  ++    ++    +A+R 
Sbjct: 189 KCGSVADA------------------VRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRL 230

Query: 214 FRMMLRMGIR--PSTISFVNVFPALSSLGDY------KSADVVYGLLVKLGSEYVNDLFV 265
           F  M R  IR  P  +S V    A +  GDY      + A  ++ L+V+ G  + +D  V
Sbjct: 231 FARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKG--FDSDQHV 288

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-D 324
            +S I MYA+    D A K+F++    +   WN ++ GY Q    +   E  ++VL+L  
Sbjct: 289 GNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQ----LGCYERALEVLDLMQ 344

Query: 325 EIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTM 382
           E  F+  +VT+ + L++  + +++   + +                + + +  V +WNT+
Sbjct: 345 ESGFEPNEVTYSNMLASCIKARDVPSARAM---------------FDKISKPSVTTWNTL 389

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY---LLR 439
           +S + Q  L  + + L   MQ Q    D  T+  +LS  S L   ++GKQ H+    LL 
Sbjct: 390 LSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLL 449

Query: 440 HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           H   F  + S LIDMY+K G +  A+ IF  N   +RD   WN+MI+G   + L EEAF 
Sbjct: 450 HNDMF--VASGLIDMYSKCGQVGIAQIIF--NMMTERDVVCWNSMISGLAIHSLNEEAFD 505

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F+QM E+ + P   + AS++ +C  + +I  G+Q+H   ++   DQNV+VG+SLIDMY+
Sbjct: 506 FFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYA 565

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G ++ A   F  +  KN V +  MI GY Q+G  E+A+ LF  M     +PD++TF+A
Sbjct: 566 KCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIA 625

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VL+ CS++GLVDE +  F+ M+  Y I+P  EHY C+ D LGR G+  E    + ++  +
Sbjct: 626 VLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYK 685

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            + + +W  LL +C +H ++EL E  AK L  +D +N  P  +VLLSNIYA  G   +  
Sbjct: 686 DDAI-LWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSP--YVLLSNIYATLGRHGDAS 742

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
            VR  M  RG+ K  G SW++              H    + + + + L M   N G  T
Sbjct: 743 AVRALMSSRGVVKGRGYSWVN--------------HKDGARAFMVADDLGM---NVGEPT 785

Query: 800 IQNSNVDAT 808
           + + N D +
Sbjct: 786 MFSDNEDTS 794



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 51/101 (50%)

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           + R L   NV+   + I    ++G +  A ++  ++P++N+V++ T+I    +      A
Sbjct: 67  AFRALPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEA 126

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           L ++R M   G+ P   T  +VLSAC     +D+G +   L
Sbjct: 127 LEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGL 167


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 218/705 (30%), Positives = 366/705 (51%), Gaps = 48/705 (6%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+AC  +++L+ GK +H   +        F+  +L+N Y +C                 
Sbjct: 9   LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSC----------------- 51

Query: 173 YSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
              YD    VFD M     +  WN +++ Y K   YVEA+  F  +L    ++P + ++ 
Sbjct: 52  -HLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYP 110

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +VF A   L  Y    +++  L+K G   + D+ V SS + MY +   F+ A  +F+   
Sbjct: 111 SVFKACGGLHRYVLGKMIHTCLIKTG--LMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP 168

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E++   WNT+I  Y Q+ +  +A+E F  ++       + VT  +A+S+ ++L +L+ G 
Sbjct: 169 EKDVACWNTVISCYYQSGNFKDALEYF-GLMRRFGFEPNSVTITTAISSCARLLDLNRGM 227

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++H  +I +   L   + +A+++                    + VV+WN+MIS +   G
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKG 287

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
                + L   M  +G      T+++L+   S       GK  H Y +R+ I  +  + S
Sbjct: 288 DIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNS 347

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D+Y K G ++ A +IF+          +WN MI+GY   G L EA   F +M +  V
Sbjct: 348 SLMDLYFKCGKVELAEKIFKLIPKSK--VVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             + +T  SVL AC+ +  +E GK++H   I   LD N  V  +L+DMY+K G ++ A +
Sbjct: 406 ESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFS 465

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  +P+++ V++T+MI  YG HG +  AL LF  M    ++PD + F+A+LSAC +AGL
Sbjct: 466 VFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGL 525

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VDEG   F+ M   Y I P  EHY C+ D+LGR G++ EAYE +++  E  + +E+  +L
Sbjct: 526 VDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTL 585

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
             +CRLH + +L   +A+ L++ D  +S    ++LLSN+YA    W+ V  VR +M+E G
Sbjct: 586 FSACRLHRNIDLGAEIARTLIDKDPDDS--STYILLSNMYASAHKWDEVRVVRSKMKELG 643

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           L+K  GCSWI++   +  F  +D  H     +++ L  L+  M +
Sbjct: 644 LKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/543 (27%), Positives = 261/543 (48%), Gaps = 49/543 (9%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +FD++  P  + +WN ++ G+  N +  EA+ L+ ++    PY   D+YTY SV KA
Sbjct: 57  AKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHY-PYLKPDSYTYPSVFKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C       +GK +H   I+        V +SL+ MY  C                  + +
Sbjct: 116 CGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKC------------------NAF 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +    +F+ M  ++V  WNT++S Y ++  + +A+  F +M R G  P++++      + 
Sbjct: 158 EKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L D      ++  L+  G  ++ D F++S+ + MY + G  + A +IF+   ++    
Sbjct: 218 ARLLDLNRGMEIHEELINSG--FLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVA 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV-SQLQELDLGQQLHAY 355
           WN+MI GY      +  I+LF ++   +E V   +T LS+L  V S+   L  G+ +H Y
Sbjct: 276 WNSMISGYGLKGDIISCIQLFKRM--YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGY 333

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            I+N +   V V +++++                      VVSWN MIS +V  G   E 
Sbjct: 334 TIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEA 393

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDM 454
           L L  EM+K     D++T T++L+A S L   + GK+ H  ++   + + E +   L+DM
Sbjct: 394 LGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDM 453

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G +  A  +F+      RD  +W +MI  Y  +G    A   F +ML+ NV P+ V
Sbjct: 454 YAKCGAVDEAFSVFKCLPK--RDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRV 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
              ++L AC   G ++ G       I  Y +   V   + LID+  ++G ++ A  +  +
Sbjct: 512 AFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571

Query: 574 IPE 576
            PE
Sbjct: 572 NPE 574



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  LA ++F  I +   V WN +I G+V     +EA+ L+S+M+KS  Y   D  T++S
Sbjct: 357 GKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKS--YVESDAITFTS 414

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC++   L  GK +H   I    + +  V  +LL+MY+ C                 
Sbjct: 415 VLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKC----------------- 457

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               D    VF  + +R++V+W ++++ Y        A+  F  ML+  ++P  ++F+ +
Sbjct: 458 -GAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAI 516

Query: 233 FPALSSLG 240
             A    G
Sbjct: 517 LSACGHAG 524


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 209/590 (35%), Positives = 325/590 (55%), Gaps = 46/590 (7%)

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           Y    +V+G ++K G    ++ FV S  + +YA+ G  + AR++FDN L RN   W T++
Sbjct: 83  YSETQIVHGHVMKTGCH--DNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLM 140

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAYIIKNF 360
            G+VQN+ P  AI +F ++L      +  V  LSA L A S LQ L LG Q HAYIIK  
Sbjct: 141 VGFVQNSQPKHAIHVFQEMLYAGS--YPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYH 198

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           V     V +A+                     E++V+SW + +SA   NG   +GL L  
Sbjct: 199 VDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFV 258

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAK 457
           EM       +  T+T+ LS    + + ++G Q ++  ++ G  +E    + + L+ +Y K
Sbjct: 259 EMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFG--YESNLRVRNSLLYLYLK 316

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL-----------EEAFVAFRQMLE 506
           SG I  A ++F + D  D    TWNAMIAG+ Q   L            EA   F ++  
Sbjct: 317 SGCIVEAHRLFNRMD--DASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNL 374

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P++ T++SVL  C+ M  IE G+Q+H  +I+     +V V TSLI MYSK G I  
Sbjct: 375 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIER 434

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A+  F ++  +  + +T+MI G+ QHGMS++AL +F  M   G+ P+A+TFV VLSACS+
Sbjct: 435 ASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSH 494

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AG+V + L  F++MQ++YKI+P+ +HY C+ DM  R+G++ +A  F+K++  E +   IW
Sbjct: 495 AGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF-IW 553

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            + +  C+ HG+ EL    A++LL +  ++  P  +VLL N+Y     +E+V +VRK M 
Sbjct: 554 SNFIAGCKSHGNLELGFYAAEQLLSLKPKD--PETYVLLLNMYLSAERFEDVSRVRKMME 611

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           E  + K    SWI +   V  F +  + HPQS  I + LE L  +++N G
Sbjct: 612 EEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVG 661



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 267/571 (46%), Gaps = 64/571 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L+ C +TR+    + VH H ++   + + FV + L+N+Y+ C +  DA        
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDAR------- 122

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VFD M RRNVVAW T++  +V+  +   A+  F+ ML  G  PS  + 
Sbjct: 123 -----------RVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTL 171

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A SSL   K  D  +  ++K   ++  D  V S+   +Y++ G  + A K F   
Sbjct: 172 SAVLHACSSLQSLKLGDQFHAYIIKYHVDF--DASVGSALCSLYSKCGRLEDALKTFSRI 229

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   W + +     N  PV+ + LFV+++ +D I  ++ T  SALS   ++  L+LG
Sbjct: 230 REKNVISWTSAVSACADNGAPVKGLRLFVEMIAVD-IKPNEFTLTSALSQCCEILSLELG 288

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ- 388
            Q+++  IK      + V N+++                    +  +V+WN MI+   Q 
Sbjct: 289 TQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQM 348

Query: 389 -----NGLD-----DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
                + L       E L L  ++   G   D  T++++LS  S +   + G+Q HA  +
Sbjct: 349 MELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 408

Query: 439 RHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G   + + S  LI MY+K G I+ A + F +  +  R    W +MI G++Q+G+ ++A
Sbjct: 409 KTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMST--RTMIAWTSMITGFSQHGMSQQA 466

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSL 554
              F  M    V PN VT   VL AC+  G +   + L+ F I   +Y +   +     +
Sbjct: 467 LHIFEDMSLAGVRPNAVTFVGVLSACSHAGMV--SQALNYFEIMQKKYKIKPAMDHYECM 524

Query: 555 IDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP- 612
           +DM+ + G +  A N   K+  E +   ++  I G   HG  E  L  + + +   ++P 
Sbjct: 525 VDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLE--LGFYAAEQLLSLKPK 582

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           D  T+V +L+    A   ++  ++  +M++E
Sbjct: 583 DPETYVLLLNMYLSAERFEDVSRVRKMMEEE 613



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 228/492 (46%), Gaps = 79/492 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD++ R   V W T+++GFV N+ P  AI ++ +M  +  Y S   YT S+VL AC
Sbjct: 121 ARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSV--YTLSAVLHAC 178

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  ++L++G   H + I+   +    V ++L ++YS C    DA                
Sbjct: 179 SSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDA---------------- 222

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F  +R +NV++W + VS        V+ +R F  M+ + I+P+  +  +      
Sbjct: 223 --LKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCC 280

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   +    VY L +K G  Y ++L V +S +++Y + GC   A ++F+   + +   W
Sbjct: 281 EILSLELGTQVYSLCIKFG--YESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTW 338

Query: 298 NTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           N MI G+ Q            +   EA++LF + L L  +  D  T  S LS  S++  +
Sbjct: 339 NAMIAGHAQMMELTKDNLSACHRGSEALKLFSK-LNLSGMKPDLFTLSSVLSVCSRMLAI 397

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G+Q+HA  IK      VIV  ++I                     R +++W +MI+ F
Sbjct: 398 EQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGF 457

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFE 445
            Q+G+  + L +  +M   G   ++VT   +LSA S           HA ++   + +FE
Sbjct: 458 SQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACS-----------HAGMVSQALNYFE 506

Query: 446 ----------GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
                      M+ Y  ++DM+ + G ++ A    +K +  +  +  W+  IAG   +G 
Sbjct: 507 IMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNY-EPSEFIWSNFIAGCKSHGN 565

Query: 494 LEEAFVAFRQML 505
           LE  F A  Q+L
Sbjct: 566 LELGFYAAEQLL 577


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 227/731 (31%), Positives = 381/731 (52%), Gaps = 63/731 (8%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           +EA   Y QMKK+    + D     S+LKAC+                    +      N
Sbjct: 31  WEACSRYHQMKKAGAQLT-DPTLVHSILKACSSLPGF---------------DSLTSTGN 74

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           S+L+ Y             +K   +D + +     VFD+MR R+ V+WN ++  ++    
Sbjct: 75  SVLDFY-------------MKTGALDSALF-----VFDSMRSRDSVSWNIMIHGHLSRGA 116

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
             + +  FR    +   P+  + V    A  SLG  +    ++G +++ G  +++   V 
Sbjct: 117 SDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG--FLDIPSVQ 174

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MYA+    + A ++FD   ER+   W+ MIGGYVQ      A++LF+++     I
Sbjct: 175 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASI 233

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             D +T +S L A +   ++ +G+ +H  +I   +   + V N++I+             
Sbjct: 234 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFK 293

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  R+ VSWN++IS  V+     E L L Y M K GF  D VT+  LL +     +
Sbjct: 294 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 353

Query: 427 QDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               K  H+ ++R G    E + + LID Y+K  LI+ A ++F++  +  +D  +W+AMI
Sbjct: 354 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKT--KDTVSWSAMI 411

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           AG+   G  +EA   F++M +    PN VTI S+L A +   +++  K  HG +IR  L 
Sbjct: 412 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLA 471

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             V VGT+++DMY+K G I  +   F +IPEKN V++  MI   G +G++  AL+L   M
Sbjct: 472 AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEM 531

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           K  G++P+ +T ++VLSACS+ GLV+EGL  F+ M Q++ ++P  EHY C+ DML R GK
Sbjct: 532 KLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGK 591

Query: 666 VVEAYEFVKELGEE-GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  A   ++++ E   +   +WG+LL +CR  G+S L    A ++LE++ ++S  GY  L
Sbjct: 592 LNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSS-AGY-FL 649

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
            S++YA  G W +  ++R  ++ RG+R   G S + V     RF + D+ HP++ +I+ +
Sbjct: 650 ASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGV 709

Query: 785 LERLAMEMRNA 795
           +E+L   M+ A
Sbjct: 710 VEQLHDCMKIA 720



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 162/569 (28%), Positives = 263/569 (46%), Gaps = 63/569 (11%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK- 97
           T T  S L    + G    A  +FDS+    +V WN +I G +      + +  + Q + 
Sbjct: 70  TSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARV 129

Query: 98  -KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYST 154
               P  S    T    + AC     +  G  +H + IR      PS  V NSLL+MY+ 
Sbjct: 130 IAFEPNVS----TLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS--VQNSLLSMYA- 182

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
                D +M             +   ++FD M  R+V++W+ ++  YV+T     A++ F
Sbjct: 183 -----DNDM-------------ERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLF 224

Query: 215 -RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
             M     I    I+ V+V  A ++ GD      V+G+++  G +Y  DLFV +S I MY
Sbjct: 225 LEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDY--DLFVGNSIIDMY 282

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           ++    + A K F+    RNT  WN++I G V+     EA+ LF  + +      D+VT 
Sbjct: 283 SKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG-FRADEVTL 341

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
           ++ L +     +    + +H+ +I+    L   V+N++I+                    
Sbjct: 342 VNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKT 401

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D VSW+ MI+ F   G  DE + L  EM +     + VT+ +LL A S   +    K  
Sbjct: 402 KDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWA 461

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H   +R G+  E  + + ++DMYAK G I  +R+ F++    +++  +W AMIA    NG
Sbjct: 462 HGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIP--EKNIVSWGAMIAACGMNG 519

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG- 551
           L  +A     +M  H + PNVVT  SVL AC+  G +E G     F    + D  V  G 
Sbjct: 520 LARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLS---FFENMVQDHGVEPGL 576

Query: 552 ---TSLIDMYSKSGVINYAANVFAKIPEK 577
              + ++DM S++G +N A N+  K+PE+
Sbjct: 577 EHYSCMVDMLSRAGKLNSAMNLIEKMPER 605



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 232/480 (48%), Gaps = 47/480 (9%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L  P++++ L  +  +     A +LFD +     + W+ +I G+V       A+ L+ +M
Sbjct: 168 LDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEM 227

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             S+     D  T  SVLKACA T ++ +G++VH   I    +   FV NS+++MYS C 
Sbjct: 228 T-SNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKC- 285

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                              ++   K F+ M  RN V+WN+I+S  V+TE++ EA+  F  
Sbjct: 286 -----------------DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 328

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M + G R   ++ VN+  +     D      ++ ++++ G E +N+ FV +S I  Y++ 
Sbjct: 329 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE-LNE-FVINSLIDAYSKC 386

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
              + A K+FD    ++T  W+ MI G+     P EAI LF ++ +  E   + VT LS 
Sbjct: 387 DLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP-NGVTILSL 445

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L A S   +L   +  H   I+  +A  V V  A++                    E+++
Sbjct: 446 LEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNI 505

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSW  MI+A   NGL  + L L+ EM+  G   + VT  ++LSA S+    + G      
Sbjct: 506 VSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFEN 565

Query: 437 LLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNG 492
           +++ HG+   G+E Y  ++DM +++G + +A  + EK     RD A  W A+++    +G
Sbjct: 566 MVQDHGVE-PGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSG 624


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 215/710 (30%), Positives = 371/710 (52%), Gaps = 58/710 (8%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++K C    +  +GK +H   +RC  +     V  SL++MY    S LD           
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGR--------- 111

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                    KVF+ M +RNVV W ++++ Y++    ++ +  F  M   G+ P+  +F +
Sbjct: 112 ---------KVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSS 162

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V   ++S G       V+   +K G    + +FV +S + MYA+ G  + AR +F     
Sbjct: 163 VLSMVASQGMVDLGQHVHAQSIKFGC--CSTVFVCNSLMNMYAKCGLVEEARVVFCRMET 220

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   WNT++ G V N   +EA++LF         +  + T+ + ++  + L+ L L +Q
Sbjct: 221 RDMVSWNTLMAGLVLNGRDLEALQLFHDSRS-SITMLTESTYSTVINLCANLKHLGLARQ 279

Query: 352 LHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNG 390
           LH+ ++K+       V+ A+++                     ++VVSW  MI   +QNG
Sbjct: 280 LHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNG 339

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE---GM 447
                  L   M++ G   + +T + +L+ +          Q HA +++   ++E    +
Sbjct: 340 DIPLAAALFSRMREDGVAPNDLTYSTILTVS----EASFPPQIHAQVIK--TNYECTPTV 393

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+  Y+K    + A  IF+  D   +D  +W+AM+  Y Q G    A  AF +M  H
Sbjct: 394 GTALMVSYSKLCSTEEALSIFKMID--QKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMH 451

Query: 508 NVTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + PN  TI+S + AC +P   ++LG+Q H  SI++     + V ++L+ MY++ G I  
Sbjct: 452 GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +  +++ +++ +M+ GY QHG S++AL +FR M+  GI+ D +TF++V+  C++
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAH 571

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV+EG Q FDLM ++Y I P+ +HY C+ D+  R GK+ E    ++ +        IW
Sbjct: 572 AGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGP-TIW 630

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR+H + EL ++ A+KLL ++  +S    +VLLSNIY+  G W+  D+VRK M 
Sbjct: 631 RALLGACRVHKNVELGKLAAEKLLSLEPLDS--ATYVLLSNIYSAAGKWKEKDEVRKLMD 688

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            + +RKE GCSWI +   V+ F + D+ HP S +IY  L  +  +++  G
Sbjct: 689 TKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEG 738



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 159/616 (25%), Positives = 288/616 (46%), Gaps = 65/616 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R++F+ + +   V W +++ G++   +  + + L+ +M+    +   + +T+SSVL   
Sbjct: 110 GRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWP--NPFTFSSVLSMV 167

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    + +G+ VH   I+     + FV NSL+NMY+ C    +A +              
Sbjct: 168 ASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARV-------------- 213

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF---RMMLRMGIRPSTISFVNVFP 234
               VF  M  R++V+WNT+++  V   R +EA++ F   R  + M    +  + +N+  
Sbjct: 214 ----VFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269

Query: 235 ALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIF-DNCLER 292
            L  LG    A  ++  ++K G   Y N   V ++ +  Y + G  D A  +F      +
Sbjct: 270 NLKHLG---LARQLHSSVLKHGFHSYGN---VMTALMDAYNKAGQLDKALDVFLLMSGSQ 323

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  MI G +QN     A  LF ++ E D +  +D+T+    S +  + E     Q+
Sbjct: 324 NVVSWTAMIDGCIQNGDIPLAAALFSRMRE-DGVAPNDLTY----STILTVSEASFPPQI 378

Query: 353 HAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
           HA +IK N+   P +                   +   + ++DVVSW+ M++ + Q G  
Sbjct: 379 HAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDC 438

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
           +       +M   G   +  T+++ + A AS     D+G+Q HA  ++H  H    + S 
Sbjct: 439 NGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSA 498

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ MYA+ G I+ A+ +FE+    DRD  +WN+M++GY Q+G  ++A   FRQM    + 
Sbjct: 499 LVSMYARKGSIENAQCVFERQT--DRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGID 556

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            + +T  SV+  C   G +E G+Q     +R Y +   +     ++D+YS++G ++   +
Sbjct: 557 MDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMS 616

Query: 570 VFAKIPEKNSVTYTTMILGYGQ-HGMSERALSLFRSMKGCGIEP-DAITFVAVLSACSYA 627
           +   +P     T    +LG  + H   E  L    + K   +EP D+ T+V + +  S A
Sbjct: 617 LIEGMPFPAGPTIWRALLGACRVHKNVE--LGKLAAEKLLSLEPLDSATYVLLSNIYSAA 674

Query: 628 GLVDEGLQIFDLMQQE 643
           G   E  ++  LM  +
Sbjct: 675 GKWKEKDEVRKLMDTK 690



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 161/344 (46%), Gaps = 28/344 (8%)

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           ++T    FV   LD      +   ++QG  +    +  ++    ++ ++ +GKQ HA  +
Sbjct: 27  FSTTWQGFVHQALDH----FLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCV 82

Query: 439 RHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           R G H  G   + + L+DMY     +   R++FE      R+  TW +++ GY Q G+L 
Sbjct: 83  RCG-HDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLK--RNVVTWTSLLTGYIQAGVLL 139

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           +    F +M    V PN  T +SVL      G ++LG+ +H  SI++     VFV  SL+
Sbjct: 140 DVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLM 199

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           +MY+K G++  A  VF ++  ++ V++ T++ G   +G    AL LF          D+ 
Sbjct: 200 NMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFH---------DSR 250

Query: 616 TFVAVLSACSYAGLVD--EGLQIFDLMQQ------EYKIQPSTEHYCCVADMLGRVGKVV 667
           + + +L+  +Y+ +++    L+   L +Q      ++           + D   + G++ 
Sbjct: 251 SSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLD 310

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           +A +    +    NV+  W +++  C  +G   LA  +  ++ E
Sbjct: 311 KALDVFLLMSGSQNVVS-WTAMIDGCIQNGDIPLAAALFSRMRE 353


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 215/633 (33%), Positives = 342/633 (54%), Gaps = 39/633 (6%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSAD 246
           RRN   W  ++       R  +AV  FR MLR G   P  ++   V        +    D
Sbjct: 99  RRNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVL-------NVPGCD 151

Query: 247 V--VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           V  ++ ++ KLG  +   + V ++ +  Y + G    AR++F     R++  +N MI G 
Sbjct: 152 VGTLHPVVTKLG--FGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGC 209

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            +     EA+ELF   +  + +     TF S L+  + + +L LG+Q+H   ++   +  
Sbjct: 210 SRQGRHGEALELFA-AMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCN 268

Query: 365 VIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V NA++                    ERD VS+N MISA   N      L L  +MQ 
Sbjct: 269 VFVNNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQT 328

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKT 463
            GF   ++   +LLS A  L +  +G+Q HA L+ HG+  E  + + LIDMY+K G++  
Sbjct: 329 LGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDA 388

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           A+ IF      D+   +W A+I G  QNG  EEA   F  M    ++P+  T +S++ + 
Sbjct: 389 AKTIFAYK--SDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSS 446

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           + +  I +G+QLH +  +     +VF G++L+DMY+K G ++ A   F ++PEKNS+T+ 
Sbjct: 447 SSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWN 506

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            +I  Y Q+G ++ A+ +F SM  CG+ PD +TF++VL+AC + GL +E ++ FDLM+  
Sbjct: 507 AVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYY 566

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y + P  EHY CV D LGR G   +  + + E+  E + + IW S+L SCR++G+ +LA 
Sbjct: 567 YSMSPWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPI-IWSSILHSCRIYGNQDLAT 625

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           V A+KL  M   ++    +V+LSNIYA+ GNWE   +V+K MR+RG++KE G SW+++  
Sbjct: 626 VAAEKLFTMVPTDATA--YVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWVEIKQ 683

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +  F+S D  +P   +I + LERL  EM   G
Sbjct: 684 KIYMFSSNDHTNPMIDEIKKELERLYEEMDKQG 716



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 190/421 (45%), Gaps = 47/421 (11%)

Query: 27  IHSLSPPIPKL----KTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           + +L P + KL          + L   C++G    AR++F  +    ++ +N +I+G   
Sbjct: 152 VGTLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHRDSITYNAMIMGCSR 211

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
                EA+ L++ M++    TS  ++T+SS+L       +L +G+ +H  F+R   + + 
Sbjct: 212 QGRHGEALELFAAMRREGVDTS--HFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNV 269

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV N+LL+ YS C S  D +                  ++FD M  R+ V++N ++S   
Sbjct: 270 FVNNALLDFYSKCDSLGDLK------------------QLFDEMSERDNVSYNVMISACS 311

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                  A++ FR M  +G    T+ + ++     +L   K    ++  L+  G    + 
Sbjct: 312 WNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLED- 370

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
            FV ++ I MY++ G  D A+ IF    ++    W  +I G VQN    EA++LF   + 
Sbjct: 371 -FVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCD-MR 428

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI---------- 366
              +  D  T  S + + S L  + +G+QLHAY+ K+      F    ++          
Sbjct: 429 RAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLD 488

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                 N + E++ ++WN +ISA+ Q G     + +   M   G   D VT  ++L+A  
Sbjct: 489 EAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACG 548

Query: 423 N 423
           +
Sbjct: 549 H 549



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 32/250 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +F   +  T + W  +I G V N    EA+ L+  M+++    S D  T SS++K+ 
Sbjct: 389 AKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAG--LSPDRATCSSIMKSS 446

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    + IG+ +H +  +    PS F  ++LL+MY+ C   LD  +              
Sbjct: 447 SSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKC-GCLDEAI-------------- 491

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              + F+ M  +N + WN ++S Y +  +   A+R F  ML  G+ P  ++F++V  A  
Sbjct: 492 ---RTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAACG 548

Query: 238 SLGDYKSADVVYGLL-----VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LE 291
             G  +     + L+     +    E+       S  I      GCFD  +K+ D    E
Sbjct: 549 HNGLAEECMKYFDLMRYYYSMSPWKEHY------SCVIDTLGRAGCFDKIQKVIDEMPFE 602

Query: 292 RNTEVWNTMI 301
            +  +W++++
Sbjct: 603 DDPIIWSSIL 612


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/681 (29%), Positives = 369/681 (54%), Gaps = 41/681 (6%)

Query: 147 SLLNMYSTCLS---SLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSW 200
           S+  ++S CL    +LD+ +V    + V Y++Y  +C   K+F+    + V  WN ++  
Sbjct: 19  SITQLHSQCLKVGLALDSFVV--TKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRS 76

Query: 201 YVKTERYVEAVRQFRMMLRMGI---RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           Y    ++VE +  F  M    +   RP   +      + S L   +   +++G L K   
Sbjct: 77  YFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKK--- 133

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           +  +D+FV S+ I +Y++ G  + A K+F    + +  +W ++I GY QN  P  A+  F
Sbjct: 134 KIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFF 193

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            +++ L+++  D VT +SA SA +QL + +LG+ +H ++ +      + + N+++     
Sbjct: 194 SRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGK 253

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           +D++SW++M++ +  NG +   L L  EM  +   ++ VTV + 
Sbjct: 254 TGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISA 313

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L A ++  N + GKQ H   + +G   +  + + L+DMY K    + A ++F  N    +
Sbjct: 314 LRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELF--NRMPKK 371

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +W  + +GY + G+  ++   F  ML +   P+ + +  +L A + +G ++    LH
Sbjct: 372 DVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLH 431

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            F  +   D N F+G SLI++Y+K   I+ A  VF  +   + VT++++I  YG HG  E
Sbjct: 432 AFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGE 491

Query: 597 RALSLFRSMKG-CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
            AL L   M     ++P+ +TFV++LSACS+AGL++EG+++F +M  EY++ P+ EHY  
Sbjct: 492 EALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGI 551

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           + D+LGR+G++ +A + +  +  +     +WG+LLG+CR+H + ++ E+ A  L  +D  
Sbjct: 552 MVDLLGRMGELDKALDMINNMPMQAGP-HVWGALLGACRIHQNIKIGELAALNLFLLDPN 610

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           ++  GY+ LLSNIY  + NW +  K+R  ++E  L+K VG S +++   V+ F + D+ H
Sbjct: 611 HA--GYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEIKNEVHSFIASDRFH 668

Query: 776 PQSHKIYEMLERLAMEMRNAG 796
            +S +IYEML +L   MR  G
Sbjct: 669 GESDQIYEMLRKLDARMREEG 689



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 258/565 (45%), Gaps = 59/565 (10%)

Query: 38  KTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK 97
           K   + +R + +C       A +LF+     T  +WN ++  +       E + L+ QM 
Sbjct: 41  KLNVLYARYASLCH------AHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMN 94

Query: 98  KSS-PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             +      DNYT S  LK+C+  + L +GK +H  F++   +   FV ++L+ +YS C 
Sbjct: 95  ADAVTEERPDNYTVSIALKSCSGLQKLELGKMIH-GFLKKKIDSDMFVGSALIELYSKCG 153

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-R 215
              DA                   KVF    + +VV W +I++ Y +      A+  F R
Sbjct: 154 QMNDA------------------VKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSR 195

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           M++   + P  ++ V+   A + L D+     V+G + + G  +   L +A+S + +Y +
Sbjct: 196 MVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRG--FDTKLCLANSILNLYGK 253

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    A  +F     ++   W++M+  Y  N     A+ LF ++++   I  + VT +S
Sbjct: 254 TGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMID-KRIELNRVTVIS 312

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RD 375
           AL A +    L+ G+Q+H   +     L + V  A+++                    +D
Sbjct: 313 ALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKD 372

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           VVSW  + S + + G+  + L +   M   G   D++ +  +L+A+S L         HA
Sbjct: 373 VVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHA 432

Query: 436 YLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR--DQATWNAMIAGYTQNG 492
           ++ + G  + E + + LI++YAK   I  A ++F+    G R  D  TW+++IA Y  +G
Sbjct: 433 FVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFK----GLRHTDVVTWSSIIAAYGFHG 488

Query: 493 LLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFV 550
             EEA     QM  H +V PN VT  S+L AC+  G IE G K  H     Y L  N+  
Sbjct: 489 QGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEH 548

Query: 551 GTSLIDMYSKSGVINYAANVFAKIP 575
              ++D+  + G ++ A ++   +P
Sbjct: 549 YGIMVDLLGRMGELDKALDMINNMP 573


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 239/788 (30%), Positives = 396/788 (50%), Gaps = 68/788 (8%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRP 68
           L  P P   PP   L ++H+L+        P   ++L S     G P  A   F +   P
Sbjct: 20  LASPSP---PPLIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCP 76

Query: 69  TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKA 128
            T +WN+++    C +    A+  + +M+ S    S   +T      A AE   L +G +
Sbjct: 77  DTFLWNSLLRSHHCASDFDSALSAHRRMRASGARPS--RFTAPLAASAAAELAALPVGTS 134

Query: 129 VHCHFIR---CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           VH + ++      + S  V +SL+ MY+ C S  DA                   K+FD 
Sbjct: 135 VHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDA------------------VKLFDE 176

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSSLGD 241
           M  R+VVAW  +VS  V+     + +     M+R+    G RP++ +  +   A   LG+
Sbjct: 177 MVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGE 236

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +   ++G  VK   E + D  +  SA+F MY++    + A  +F    E++   W  +
Sbjct: 237 LSAGRCLHGYAVK---EGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGL 293

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IG Y +     EA+ELF Q +E   +  D+V     LS +     ++ G+  HA II+  
Sbjct: 294 IGAYCRRGLAREAVELF-QEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRN 352

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V++ N++I                    +RD  SW+ M++ + + GLD + L L  
Sbjct: 353 FGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYR 412

Query: 401 EMQKQG---FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           +MQ +    F+ D  ++ + +S+ S L    +G+  H Y ++  +    + + LI MY +
Sbjct: 413 QMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENSITNSLIGMYGR 472

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G  + A +IF       RD  TWNA+I+ Y+  G   +A   + QML  +V PN  T+ 
Sbjct: 473 CGNFELACKIFAVAKL-RRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLI 531

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +V+ AC  +  +E G+ LH +     L+ +V + T+L+DMY+K G +  A  +F  + ++
Sbjct: 532 TVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQR 591

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + VT+  MI GYG HG + +AL LF  M+   I+P+++TF+A+LSAC +AGLVDEG ++F
Sbjct: 592 DVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLF 651

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL--GEEGNVLEIWGSLLGSCRL 695
             M   Y+++P+ +HY C+ D+LG+ G + EA + V  +    +G V   WG+LL +C++
Sbjct: 652 IRMGG-YRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGV---WGTLLSACKV 707

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H + E+   VAKK    D RN   GY++L+SN Y     W+ ++K+R  M+  G+ K VG
Sbjct: 708 HDNFEMGLRVAKKAFSSDPRND--GYYILMSNSYGSAEKWDEIEKLRDTMKNYGVEKGVG 765

Query: 756 CSWIDVGG 763
            S +DV G
Sbjct: 766 WSAVDVWG 773


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 204/618 (33%), Positives = 330/618 (53%), Gaps = 60/618 (9%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           F T++   V+AW +++  +     + +A+  F  M   G  P    F +V  + + + D 
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE---LGCFDFARKIFDNCLERNTEVWNT 299
           +  + V+G +V+LG +   DL+  ++ + MYA+   +G       +FD   +R +     
Sbjct: 122 RFGESVHGFIVRLGMDC--DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSN---- 175

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
                   +  V+A E  +    +D +                               + 
Sbjct: 176 ------SGDEDVKA-ETCIMPFGIDSVR------------------------------RV 198

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
           F  +P         +DVVS+NT+I+ + Q+G+ ++ L +V EM       DS T++++L 
Sbjct: 199 FEVMP--------RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
             S   +   GK+ H Y++R GI  +  + S L+DMYAKS  I+ + ++F +     RD 
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC--RDG 308

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +WN+++AGY QNG   EA   FRQM+   V P  V  +SV+PAC  +  + LGKQLHG+
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            +R     N+F+ ++L+DMYSK G I  A  +F ++   + V++T +I+G+  HG    A
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           +SLF  MK  G++P+ + FVAVL+ACS+ GLVDE    F+ M + Y +    EHY  VAD
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR GK+ EAY F+ ++  E     +W +LL SC +H + ELAE VA+K+  +D+ N  
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTG-SVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM- 546

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G +VL+ N+YA  G W+ + K+R  MR++GLRK+  CSWI++    + F S D+ HP  
Sbjct: 547 -GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605

Query: 779 HKIYEMLERLAMEMRNAG 796
            KI E L+ +  +M   G
Sbjct: 606 DKINEFLKAVMEQMEKEG 623



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 144/601 (23%), Positives = 263/601 (43%), Gaps = 80/601 (13%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
           M+SS   +      PT      Q  Q+H+       L   +    +S        H A  
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-DNYTYSSVLKACAE 119
           LF ++  P  + W ++I  F   +L  +A+  + +M+ S     C D+  + SVLK+C  
Sbjct: 61  LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG---RCPDHNVFPSVLKSCTM 117

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK---- 175
             +LR G++VH   +R   +   +  N+L+NMY+  L       VG  + E+        
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSG 177

Query: 176 --------------YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                          D V +VF+ M R++VV++NTI++ Y ++  Y +A+R  R M    
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++P + +  +V P  S   D      ++G +++ G +  +D+++ SS + MYA+    + 
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID--SDVYIGSSLVDMYAKSARIED 295

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           + ++F     R+   WN+++ GYVQN    EA+ LF Q++   ++    V F S + A +
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACA 354

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNT 381
            L  L LG+QLH Y+++      + + +A+++                     D VSW  
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I     +G   E + L  EM++QG   + V   A+L+A S+     VG    A+     
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH-----VGLVDEAW----- 464

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                   Y   M    GL              +++   + A+     + G LEEA+   
Sbjct: 465 -------GYFNSMTKVYGL--------------NQELEHYAAVADLLGRAGKLEEAYNFI 503

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M    V P     +++L +C+   N+EL +++    I  +  +N+     + +MY+ +
Sbjct: 504 SKMC---VEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGAYVLMCNMYASN 559

Query: 562 G 562
           G
Sbjct: 560 G 560



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 38/244 (15%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           +  L+   + ++++   KQ HA  +R         S +I +Y    L+  A  +F+   S
Sbjct: 8   IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                  W ++I  +T   L  +A  +F +M      P+     SVL +C  M ++  G+
Sbjct: 68  PP--VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSK-----------------------SG-------- 562
            +HGF +R  +D +++ G +L++MY+K                       SG        
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185

Query: 563 -----VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
                 I+    VF  +P K+ V+Y T+I GY Q GM E AL + R M    ++PD+ T 
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245

Query: 618 VAVL 621
            +VL
Sbjct: 246 SSVL 249


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/667 (29%), Positives = 355/667 (53%), Gaps = 32/667 (4%)

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           +S  DA    L    +  ++  L   VFD + + +VV WN ++  Y  +  + +++  + 
Sbjct: 37  VSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYL 96

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            ML++G+ P+  +F  +  A SSL   +   +++     LG     DL+V+++ + MYA+
Sbjct: 97  HMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSM--DLYVSTALLHMYAK 154

Query: 276 LGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            G    A+ +F++   ++ ++  WN MI  +  +    + I    Q ++   +  +  T 
Sbjct: 155 CGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQ-MQQAGVTPNSSTL 213

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIE 373
           +S L  + Q   L  G+ +HAY I+NF    V+                    + N V +
Sbjct: 214 VSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNK 273

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           ++ V W+ MI  +V +    + L L  +M    G      T+  +L A + L +   GK+
Sbjct: 274 KNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKK 333

Query: 433 THAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            H ++++ G+  +  + + LI MYAK G++  A    ++  +  +D  +++A+I+G  QN
Sbjct: 334 LHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIA--KDTVSYSAIISGCVQN 391

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  E+A + FRQM    + P + T+ ++LPAC+ +  ++ G   HG+++      +  + 
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSIC 451

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            ++IDMYSK G I  +  +F ++  ++ +++ TMI+GYG HG+   ALSLF+ ++  G++
Sbjct: 452 NAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLK 511

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +T +AVLSACS++GLV EG   F  M Q + I+P   HY C+ D+L R G + EAY 
Sbjct: 512 PDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYT 571

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
           F++ +    NV  IWG+LL +CR H + E+ E V+KK+  +    +  G  VL+SNIY+ 
Sbjct: 572 FIQRMPFVPNV-RIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGT--GNFVLMSNIYSS 628

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G W++   +R   R  G +K  GCSW+++ G ++ F    Q HPQS  I + L+ L ++
Sbjct: 629 VGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQ 688

Query: 792 MRNAGNK 798
           M+  G +
Sbjct: 689 MKKLGYR 695



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 283/582 (48%), Gaps = 60/582 (10%)

Query: 26  QIHSLSP-PIPK-------LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTII 77
           QI S SP P P          T   R  +S+        LAR +FD I +P+ V+WN +I
Sbjct: 24  QIRSFSPHPHPHRVSDSDAAATQLARYHISR----NEIQLARHVFDQIPKPSVVLWNMMI 79

Query: 78  IGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
             +  +    ++I LY  M +     +  N+T+  +LKAC+  + L++G+ +H H     
Sbjct: 80  RTYAWSGPFQQSIYLYLHMLQLG--VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILG 137

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWN 195
            +   +V  +LL+MY+ C     A+                   +F+++  + R++VAWN
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQ------------------TLFNSISHQDRDIVAWN 179

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
            +++ +     + + +     M + G+ P++ + V++ P +           ++   ++ 
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR- 238

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
            + + +++ + ++ + MYA+     +ARKIF+   ++N   W+ MIGGYV ++   +A+ 
Sbjct: 239 -NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALA 297

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV-------- 367
           L+  +L +  +     T  + L A +QL +L  G++LH ++IK+ + L   V        
Sbjct: 298 LYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357

Query: 368 ------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                       L+ +I +D VS++ +IS  VQNG  ++ L++  +MQ  G      T+ 
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           ALL A S+L     G   H Y +  G   +  + + +IDMY+K G I  +R+IF++    
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ-- 475

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           +RD  +WN MI GY  +GL  EA   F+++    + P+ VT+ +VL AC+  G +  GK 
Sbjct: 476 NRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKY 535

Query: 535 -LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
                S  + +   +     ++D+ +++G ++ A     ++P
Sbjct: 536 WFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMP 577



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 180/378 (47%), Gaps = 41/378 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM---KKSSPYTSCDNYTYSSVL 114
           AR++F+++ +   V W+ +I G+V ++   +A+ LY  M      +P  +    T +++L
Sbjct: 264 ARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPA----TLATML 319

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           +ACA+  +L+ GK +HCH I+   +    V NSL++MY+ C   +    VG         
Sbjct: 320 RACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC--GIMDNAVGF-------- 369

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                    D M  ++ V+++ I+S  V+     +A+  FR M   GI P   + + + P
Sbjct: 370 --------LDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLP 421

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A S L   +     +G  V  G  + ND  + ++ I MY++ G    +R+IFD    R+ 
Sbjct: 422 ACSHLAALQHGTCCHGYTVVRG--FTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDI 479

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WNTMI GY  +   VEA+ LF Q L+   +  DDVT ++ LSA S    +  G+   +
Sbjct: 480 ISWNTMIIGYGIHGLCVEALSLF-QELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS 538

Query: 355 YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
            + +NF   P           +  +  M+    + G  DE    +   Q+  F+ +    
Sbjct: 539 SMSQNFNIKP----------RMAHYICMVDLLARAGNLDEAYTFI---QRMPFVPNVRIW 585

Query: 415 TALLSAASNLRNQDVGKQ 432
            ALL+A    +N ++G+Q
Sbjct: 586 GALLAACRTHKNIEMGEQ 603


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 202/597 (33%), Positives = 325/597 (54%), Gaps = 28/597 (4%)

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G  P   +F ++    ++  D  +   V+  L   G     +   A++   MYA+     
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG--LSPEALAATALANMYAKCRRPG 277

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            AR++FD    R+   WN ++ GY +N     A+ + V++ E D    D VT +S L A 
Sbjct: 278 DARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           +  Q L   +++HA+ ++      V V  A+++                    R+ VSWN
Sbjct: 338 ADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWN 397

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            MI  + +NG   E L L   M  +G  +  V+V A L A   L   D G++ H  L+R 
Sbjct: 398 AMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRI 457

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G+     + + LI MY K      A Q+F  ++ G + + +WNAMI G TQNG  E+A  
Sbjct: 458 GLESNVNVMNALITMYCKCKRTDLAAQVF--DELGYKTRVSWNAMILGCTQNGSSEDAVR 515

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +M   NV P+  T+ S++PA   + +    + +HG+SIR  LDQ+V+V T+LIDMY+
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 575

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G ++ A ++F    +++ +T+  MI GYG HG  + A+ LF  MK  G  P+  TF++
Sbjct: 576 KCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VLSACS+AGLVDEG + F  M+++Y ++P  EHY  + D+LGR GK+ EA+ F++++  E
Sbjct: 636 VLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPME 695

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
             +  ++G++LG+C+LH + ELAE  A+++ E++    +  YHVLL+NIYA    W++V 
Sbjct: 696 PGI-SVYGAMLGACKLHKNVELAEESAQRIFELEPEEGV--YHVLLANIYANASLWKDVA 752

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +VR  M ++GL+K  G S + +   ++ F S    H Q+  IY  L +L  E++  G
Sbjct: 753 RVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVG 809



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 244/506 (48%), Gaps = 52/506 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T++S+LK CA   +L  G+AVH        +P      +L NMY+ C    DA       
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDAR------ 280

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FRMMLRMGIRPSTI 227
                       +VFD M  R+ VAWN +V+ Y +      AV    RM    G RP  +
Sbjct: 281 ------------RVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAV 328

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           + V+V PA +      +   V+   V+ G  E VN   V+++ + +Y + G  D ARK+F
Sbjct: 329 TLVSVLPACADAQALGACREVHAFAVRGGFDEQVN---VSTAILDVYCKCGAVDSARKVF 385

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   +RN+  WN MI GY +N    EA+ LF +++  + +   DV+ L+AL A  +L  L
Sbjct: 386 DGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVG-EGVDVTDVSVLAALHACGELGFL 444

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           D G+++H  +++  +   V V+NA+I                     +  VSWN MI   
Sbjct: 445 DEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGC 504

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QNG  ++ + L   MQ +    DS T+ +++ A +++ +    +  H Y +R  +H + 
Sbjct: 505 TQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIR--LHLDQ 562

Query: 447 ---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + LIDMYAK G +  AR +F  N + DR   TWNAMI GY  +G  + A   F +
Sbjct: 563 DVYVLTALIDMYAKCGRVSIARSLF--NSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M      PN  T  SVL AC+  G ++ G++        Y L+  +    +++D+  ++G
Sbjct: 621 MKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAG 680

Query: 563 VINYAANVFAKIPEKNSVTYTTMILG 588
            ++ A +   K+P +  ++    +LG
Sbjct: 681 KLHEAWSFIQKMPMEPGISVYGAMLG 706



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 203/439 (46%), Gaps = 44/439 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD +     V WN ++ G+  N L   A+ +  +M++       D  T  SV
Sbjct: 275 RPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERP-DAVTLVSV 333

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA+ + L   + VH   +R   +    V  ++L++Y  C +             VD 
Sbjct: 334 LPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGA-------------VDS 380

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           ++     KVFD M+ RN V+WN ++  Y +     EA+  F+ M+  G+  + +S +   
Sbjct: 381 AR-----KVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A   LG       V+ LLV++G E  +++ V ++ I MY +    D A ++FD    + 
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLE--SNVNVMNALITMYCKCKRTDLAAQVFDELGYKT 493

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI G  QN    +A+ LF + ++L+ +  D  T +S + A++ + +    + +H
Sbjct: 494 RVSWNAMILGCTQNGSSEDAVRLFSR-MQLENVKPDSFTLVSIIPALADISDPLQARWIH 552

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
            Y I+  +   V VL A+I                    +R V++WN MI  +  +G   
Sbjct: 553 GYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGK 612

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--L 451
             + L  EM+  G + +  T  ++LSA S+    D G++  + +        GME Y  +
Sbjct: 613 VAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTM 672

Query: 452 IDMYAKSGLIKTARQIFEK 470
           +D+  ++G +  A    +K
Sbjct: 673 VDLLGRAGKLHEAWSFIQK 691



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 23/311 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    AR++FD +    +V WN +I G+  N    EA+ L+ +M          + +
Sbjct: 373 CKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG--VDVTDVS 430

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             + L AC E   L  G+ VH   +R     +  V N+L+ MY  C              
Sbjct: 431 VLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKC-------------- 476

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                + DL  +VFD +  +  V+WN ++    +     +AVR F  M    ++P + + 
Sbjct: 477 ----KRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTL 532

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++ PAL+ + D   A  ++G  ++L  +   D++V ++ I MYA+ G    AR +F++ 
Sbjct: 533 VSIIPALADISDPLQARWIHGYSIRLHLD--QDVYVLTALIDMYAKCGRVSIARSLFNSA 590

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +R+   WN MI GY  +     A+ELF + ++    V ++ TFLS LSA S    +D G
Sbjct: 591 RDRHVITWNAMIHGYGSHGSGKVAVELF-EEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649

Query: 350 QQLHAYIIKNF 360
           Q+  + + +++
Sbjct: 650 QEYFSSMKEDY 660


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 325/649 (50%), Gaps = 86/649 (13%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           V D +   NV +++T++  + K  ++  A+  F  ML  G+ P      +   A + L  
Sbjct: 70  VLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSA 129

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            K A  V+G+    G  + +D FV SS + MY +      A ++FD   E +   W+ ++
Sbjct: 130 LKPARQVHGIASVSG--FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             Y +     EA  LF ++ +                                       
Sbjct: 188 AAYARQGCVDEAKRLFSEMGD--------------------------------------- 208

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                   + ++ +++SWN MI+ F  +GL  E +++  +M  +GF  D  T++++L A 
Sbjct: 209 --------SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 422 SNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGD----- 475
            +L +  +G   H Y+++ G +  + + S LIDMY K        Q+F++ D  D     
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 476 ----------------------RDQA------TWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                                 +DQ       +W +MIA  +QNG   EA   FR+M   
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIA 380

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V PN VTI  +LPAC  +  +  GK  H FS+R  +  +V+VG++LIDMY+K G I  +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQAS 440

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
              F  IP KN V +  +I GY  HG ++ A+ +F  M+  G +PD I+F  VLSACS +
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GL +EG   F+ M  +Y I+   EHY C+  +L R GK+ +AY  ++ +    +   +WG
Sbjct: 501 GLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC-VWG 559

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL SCR+H +  L EV A+KL E++  N  PG ++LLSNIYA +G W  V++VR  M+ 
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSN--PGNYILLSNIYASKGMWNEVNRVRDMMKN 617

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +GLRK  GCSWI+V   V+   + D+ HPQ  +I E L++L+MEM+  G
Sbjct: 618 KGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLG 666



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 127/566 (22%), Positives = 218/566 (38%), Gaps = 147/566 (25%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  + D +  P    ++T+I  F   +  + A+  +SQM         DN    S +KAC
Sbjct: 67  ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP--DNRVLPSAVKAC 124

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L+  + VH        +   FV +SL++MY  C    DA                
Sbjct: 125 AGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH--------------- 169

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF-------- 229
              +VFD M   +VV+W+ +V+ Y +     EA R F  M   G++P+ IS+        
Sbjct: 170 ---RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226

Query: 230 ---------------------------VNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                                       +V PA+  L D     +++G ++K G   V+D
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG--LVSD 284

Query: 263 LFVASSAIFMYAELGCFDFARKIFD--------NC------LERNTEV------------ 296
             V+S+ I MY +  C     ++FD        +C      L RN +V            
Sbjct: 285 KCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKD 344

Query: 297 ---------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                    W +MI    QN   +EA+ELF + +++  +  + VT    L A   +  L 
Sbjct: 345 QGMELNVVSWTSMIACCSQNGRDMEALELFRE-MQIAGVKPNSVTIPCLLPACGNIAALM 403

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+  H + ++  ++  V V +A+I+                    +++V WN +I+ + 
Sbjct: 404 HGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYA 463

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            +G   E + +   MQ+ G   D ++ T +LSA S                + G+  EG 
Sbjct: 464 MHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACS----------------QSGLTEEG- 506

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             Y   M +K G+                    +  M+   ++ G LE+A+   R+M   
Sbjct: 507 SYYFNSMSSKYGIEARVEH--------------YACMVTLLSRAGKLEQAYAMIRRM--- 549

Query: 508 NVTPNVVTIASVLPACNPMGNIELGK 533
            V P+     ++L +C    N+ LG+
Sbjct: 550 PVNPDACVWGALLSSCRVHNNVSLGE 575



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 26/312 (8%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDN 107
           C +    L  ++ DS  +P  + WN +I GF  + L  EA+L++  M  +   P    D 
Sbjct: 195 CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP----DG 250

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------------ 155
            T SSVL A  +  +L +G  +H + I+      + V ++L++MY  C            
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310

Query: 156 -----LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
                + S +A + GL       S   L  ++ D     NVV+W ++++   +  R +EA
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEA 370

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  FR M   G++P++++   + PA  ++         +   ++ G     D++V S+ I
Sbjct: 371 LELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIS--TDVYVGSALI 428

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+ G    +R  FD    +N   WN +I GY  +    EA+E+F  +++      D 
Sbjct: 429 DMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF-DLMQRSGQKPDI 487

Query: 331 VTFLSALSAVSQ 342
           ++F   LSA SQ
Sbjct: 488 ISFTCVLSACSQ 499



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
           ++DSV  T L    S   +    +Q HA++L+ G+  +  + + L+  YA +     A  
Sbjct: 10  LLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL 69

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           + +     + +  +++ +I  +++      A   F QML   + P+   + S + AC  +
Sbjct: 70  VLDL--VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             ++  +Q+HG +     D + FV +SL+ MY K   I  A  VF ++ E + V+++ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             Y + G  + A  LF  M   G++P+ I++  +++  +++GL  E + +F
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 31/212 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           E    L RQL D       V W ++I     N    EA+ L+ +M+ +      ++ T  
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAG--VKPNSVTIP 390

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +L AC     L  GKA HC  +R   +   +V ++L++MY+ C               +
Sbjct: 391 CLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC-------------GRI 437

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
             S+   +C  FD +  +N+V WN +++ Y    +  EA+  F +M R G +P  ISF  
Sbjct: 438 QASR---IC--FDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTC 492

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           V  A S  G           L + GS Y N +
Sbjct: 493 VLSACSQSG-----------LTEEGSYYFNSM 513


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 220/716 (30%), Positives = 354/716 (49%), Gaps = 129/716 (18%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TY SVL+ CA  ++   GK VH             +   L++ Y+TC    +        
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGR------ 154

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       +VFDTM ++NV  WN +VS Y K                         
Sbjct: 155 ------------RVFDTMEKKNVYLWNFMVSEYAK------------------------- 177

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
                     +GD+K +  ++ ++V+ G E                     + A ++FD 
Sbjct: 178 ----------IGDFKESICLFKIMVEKGIEGKRP-----------------ESAFELFDK 210

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +R+   WN+MI GYV N      + ++ Q++ L  I  D  T +S L   +    L L
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCANSGTLSL 269

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+ +H+  IK+     +   N ++                    ER+VVSW +MI+ + +
Sbjct: 270 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 329

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +G  D  + L+ +M+K+G  +D V +T++L A +   + D GK  H Y     I    ME
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-----IKANNME 384

Query: 449 S------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           S       L+DMYAK G ++ A  +F       +D  +WN MI                 
Sbjct: 385 SNLFVCNALMDMYAKCGSMEAANSVFSTMVV--KDIISWNTMIG---------------- 426

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
                 + P+  T+A VLPAC  +  +E GK++HG+ +R     +  V  +L+D+Y K G
Sbjct: 427 -----ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           V+  A  +F  IP K+ V++T MI GYG HG    A++ F  M+  GIEPD ++F+++L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS++GL+++G + F +M+ ++ I+P  EHY C+ D+L R G + +AYEF++ L    + 
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA 601

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LL  CR +   ELAE VA+++ E++  N+  GY+VLL+NIYAE   WE V ++R
Sbjct: 602 -TIWGALLCGCRNYHDIELAEKVAERVFELEPENT--GYYVLLANIYAEAEKWEEVKRLR 658

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFAS-KDQEHPQSHKIYEMLERLAMEMRNAGN 797
           +++ ++GLRK  GCSWI++ G VN F S  +  HP S  I  +L+++  +M+  G+
Sbjct: 659 EKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGH 714



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 204/457 (44%), Gaps = 69/457 (15%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  A +LFD +     + WN++I G+V N L    + +Y QM         D  T  SV
Sbjct: 200 RPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG--IDVDLATIISV 257

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L  CA +  L +GKAVH   I+          N+LL+MYS C   LD  +          
Sbjct: 258 LVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDGAL---------- 306

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  +VF+ M  RNVV+W ++++ Y +  R   A++  + M + G++   ++  ++ 
Sbjct: 307 -------RVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +  G   +   V+  +     E  ++LFV ++ + MYA+ G  + A  +F   + ++
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNME--SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WNTMIG                      E+  D  T    L A + L  L+ G+++H
Sbjct: 418 IISWNTMIG----------------------ELKPDSRTMACVLPACASLSALERGKEIH 455

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            YI++N  +    V NA+++                    +D+VSW  MI+ +  +G  +
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 515

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY-- 450
           E +    EM+  G   D V+  ++L A S+    + G +   Y++++  + E  +E Y  
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYAC 574

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           ++D+ +++G +  A +  E       D   W A++ G
Sbjct: 575 MVDLLSRTGNLSKAYEFMETLPIAP-DATIWGALLCG 610



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 22/184 (11%)

Query: 475 DRDQATWNAMIAGYTQNGLLEEA--FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           D     +NA I  + Q G LE A   +   Q  E        T  SVL  C  + +   G
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK----TYGSVLQLCAGLKSFTDG 118

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K++H       +  +  +G  L+  Y+  G +     VF  + +KN   +  M+  Y + 
Sbjct: 119 KKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 593 GMSERALSLFRSMKGCGIEP----------------DAITFVAVLSACSYAGLVDEGLQI 636
           G  + ++ LF+ M   GIE                 D I++ +++S     GL + GL I
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238

Query: 637 FDLM 640
           +  M
Sbjct: 239 YKQM 242


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 195/610 (31%), Positives = 336/610 (55%), Gaps = 30/610 (4%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + + DL   VFDT+   + ++W  I+ WY     + + V  +  M         + F +V
Sbjct: 50  FGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHV 109

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S   ++     V+  +VK G+    D FV +  + MYA+ G  + +R +FD  L+R
Sbjct: 110 LKACSESRNFDEGRKVHCQIVKFGNP---DSFVFTGLVDMYAKCGEIECSRSVFDENLDR 166

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W++MI GYVQNN   + + LF ++ E + I  + +T    + A  +L  L  G+ L
Sbjct: 167 NVFSWSSMIAGYVQNNLAQDGLVLFNRMRE-ELIEANQITLGILVHACKKLGALHQGKWL 225

Query: 353 HAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLD 392
           H Y+IK  + L   ++ A+++                     D+VSW  MI  + QNG  
Sbjct: 226 HGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCP 285

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI 452
           +E L L  + ++   + + VT+ ++ S+ S L N ++G+  H   ++ G     + + L+
Sbjct: 286 EEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLV 345

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D YAK  + + AR +FE     DRD   WN++I+ ++QNG   EA   F QM   +V P+
Sbjct: 346 DFYAKCQMNRDARYVFET--ISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPD 403

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT+ SVL AC  +  +++G   H +++ R LL  NV+VGT+L+  Y+K G    A  +F
Sbjct: 404 AVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIF 463

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             + +K++VT++ MI GYG  G    +LS+F  M    ++P+   F ++LSACS+ G++ 
Sbjct: 464 DGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIG 523

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG ++F ++ Q+Y + PST+HY C+ D+L R G++ EA +F++++  + +V  ++G+ L 
Sbjct: 524 EGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDV-SLFGAFLH 582

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            C LH   +L E+  K++LE+   ++   Y+VL+ N+YA +  W  V +VR+ M++RGL 
Sbjct: 583 GCGLHSRFDLGELAIKRMLELHPGDAC--YYVLMCNLYASDARWSKVKQVRELMKQRGLM 640

Query: 752 KEVGCSWIDV 761
           K  GCS +++
Sbjct: 641 KTPGCSLMEM 650



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 281/563 (49%), Gaps = 49/563 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LAR +FD+I  P  + W  II  +  N+   + +  Y++M+       CDN  +S 
Sbjct: 51  GRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVC--LKECDNVVFSH 108

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC+E+RN   G+ VHC  ++ F NP  FV+  L++MY+ C              E++
Sbjct: 109 VLKACSESRNFDEGRKVHCQIVK-FGNPDSFVFTGLVDMYAKC-------------GEIE 154

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S+      VFD    RNV +W+++++ YV+     + +  F  M    I  + I+   +
Sbjct: 155 CSR-----SVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGIL 209

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A   LG       ++G L+K G E  +  ++ ++ + +YA+ G    AR +FD     
Sbjct: 210 VHACKKLGALHQGKWLHGYLIKCGIELGS--YLVTALLDLYAKCGVVRDARSVFDELHGI 267

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  MI GY QN  P EA++LF+Q  E   ++ +DVT  S  S+ SQL  L+LG+ +
Sbjct: 268 DIVSWTAMIVGYTQNGCPEEALKLFLQK-EQVAVLPNDVTIASVFSSCSQLLNLNLGRSI 326

Query: 353 HAYIIKNFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           H   IK     P++                   V   + +RDVV+WN++ISAF QNG   
Sbjct: 327 HGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAY 386

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYL 451
           E L L ++M+    + D+VT+ ++LSA ++L    VG   HAY ++ G+      + + L
Sbjct: 387 EALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTAL 446

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +  YAK G  ++AR IF+  D   +   TW+AMI+GY   G    +   F  ML+  + P
Sbjct: 447 LTFYAKCGDAESARVIFDGMDQ--KSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKP 504

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N     S+L AC+  G I  G +L     + Y L  +    T ++D+ +++G +  A + 
Sbjct: 505 NEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDF 564

Query: 571 FAKIPEKNSVT-YTTMILGYGQH 592
             K+P +  V+ +   + G G H
Sbjct: 565 IQKMPVQPDVSLFGAFLHGCGLH 587



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 206/388 (53%), Gaps = 32/388 (8%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF---- 317
           DL  ++  + +Y   G  D AR +FD     +   W  +I  Y  N+   + +  +    
Sbjct: 36  DLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMR 95

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-----NFVALPVI------ 366
           V + E D +VF  V     L A S+ +  D G+++H  I+K     +FV   ++      
Sbjct: 96  VCLKECDNVVFSHV-----LKACSESRNFDEGRKVHCQIVKFGNPDSFVFTGLVDMYAKC 150

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V +  ++R+V SW++MI+ +VQN L  +GL+L   M+++    + +T+  L+
Sbjct: 151 GEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILV 210

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
            A   L     GK  H YL++ GI     + + L+D+YAK G+++ AR +F++      D
Sbjct: 211 HACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHG--ID 268

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +W AMI GYTQNG  EEA   F Q  +  V PN VTIASV  +C+ + N+ LG+ +HG
Sbjct: 269 IVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHG 328

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
            SI+ L  ++  V  SL+D Y+K  +   A  VF  I +++ V + ++I  + Q+G +  
Sbjct: 329 LSIK-LGSRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYE 387

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACS 625
           AL LF  M+   + PDA+T V+VLSAC+
Sbjct: 388 ALELFHQMRMGSVLPDAVTLVSVLSACA 415



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 4/164 (2%)

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           NI    ++H + +   L +++   T L+ +Y   G ++ A  VF  IP  + +++  +I 
Sbjct: 17  NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIR 76

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            Y  +      +  +  M+ C  E D + F  VL ACS +   DEG ++    Q      
Sbjct: 77  WYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVH--CQIVKFGN 134

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           P +  +  + DM  + G+ +E    V +   + NV   W S++ 
Sbjct: 135 PDSFVFTGLVDMYAKCGE-IECSRSVFDENLDRNVFS-WSSMIA 176


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 217/637 (34%), Positives = 347/637 (54%), Gaps = 40/637 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD + RR+ V+WN +++    +  + EA R  R M   G+  +T +  +   + +   
Sbjct: 48  RVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVAR 107

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  +  L +K G    N++F AS+ + +YA+ G    AR++FD   ERNT  WN +
Sbjct: 108 RPAIGAQLQSLALKSG--LANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNAL 165

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++     A+ELF++ +E + +  D+ TF S L+AV +     L  QLH  I+K  
Sbjct: 166 IAGYTESGDMASALELFLE-MEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYG 223

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGL-ML 398
            AL + VLNA I                      RD++SWN M+ A+  NG+DDE +   
Sbjct: 224 SALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFF 283

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQD-VGKQTHAYLLRHGIHFEGME---SYLIDM 454
           V  MQ+ G   D  + T+++S+ S   + D  G+  H  +++  +  EG+    + LI M
Sbjct: 284 VRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL--EGVTPVCNALIAM 341

Query: 455 YAK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           Y +   + +++ A + F  N    +D  +WN+M+ GY+Q+GL  +A   FR M   NV  
Sbjct: 342 YTRYNENCMMEDAYKCF--NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +    ++ L + + +  ++LGKQ+HG  I      N FV +SLI MYSKSG+I+ A   F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            +  + +SV +  MI GY QHG +E    LF  M       D ITFV ++++CS+AGLVD
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVD 519

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG +I + M+ +Y +    EHY C  D+ GR G++ +A + +  +  E + + +W +LLG
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAM-VWMTLLG 578

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG+ ELA  VA  L   + R      +VLLS++Y+  G W +   V++ M++RGL 
Sbjct: 579 ACRIHGNVELASDVASHLFVAEPRQH--STYVLLSSMYSGLGMWSDRATVQRVMKKRGLS 636

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           K  G SWI+V   V+ F ++D+ HP+  +IYEML  L
Sbjct: 637 KVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 262/569 (46%), Gaps = 53/569 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + R   V WN ++     +    EA  L   M       + + +   S L++ 
Sbjct: 46  ARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG--LASNTFALGSALRSA 103

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  R   IG  +    ++     + F  ++LL++Y+ C    DA                
Sbjct: 104 AVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR--------------- 148

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RN V+WN +++ Y ++     A+  F  M R G+ P   +F ++  A+ 
Sbjct: 149 ---QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
               +     ++G +VK GS     L V ++AI  Y++ G    +R+IFD   + R+   
Sbjct: 206 GPSCFLMHQ-LHGKIVKYGSAL--GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD-LGQQLHAY 355
           WN M+G Y  N    EA++ FV++++   +  D  +F S +S+ S+    D  G+ +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 356 IIKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLD 392
           +IK+ +     V NA+I                        +D VSWN+M++ + Q+GL 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLS 382

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYL 451
            + L     M  +    D    +A L ++S L    +GKQ H  ++  G    + + S L
Sbjct: 383 ADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSL 442

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MY+KSG+I  AR+ FE+ D        WNAMI GY Q+G  E   + F +ML+     
Sbjct: 443 IFMYSKSGIIDDARKSFEEADKS--SSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500

Query: 512 NVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           + +T   ++ +C+  G ++ G + L+    +Y +   +      +D+Y ++G ++ A  +
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560

Query: 571 FAKIP-EKNSVTYTTMILGYGQHGMSERA 598
              +P E +++ + T++     HG  E A
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELA 589



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 212/444 (47%), Gaps = 50/444 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   ARQ+FD +    TV WN +I G+  +     A+ L+ +M++     + D  T++S
Sbjct: 142 GRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG--LAPDEATFAS 199

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A  E  +  +   +H   ++  S     V N+ +  YS C S  D+           
Sbjct: 200 LLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR---------- 248

Query: 173 YSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                   ++FD +   R++++WN ++  Y       EA++ F RMM   G+ P   SF 
Sbjct: 249 --------RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT 300

Query: 231 NVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAELGCFDFARKIFDN 288
           ++  + S  G D     V++GL++K   E V  +  A  A++  Y E    + A K F++
Sbjct: 301 SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS 360

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + ++T  WN+M+ GY Q+    +A++ F + +  + +  D+  F +AL + S+L  L L
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFF-RCMCSENVRTDEYAFSAALRSSSELAVLQL 419

Query: 349 GQQLHAYII------KNFVALPVIVL---NAVIE-----------RDVVSWNTMISAFVQ 388
           G+Q+H  +I       +FV+  +I +   + +I+              V WN MI  + Q
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGM 447
           +G  +   +L  EM ++   +D +T   L+++ S+    D G +  +    ++G+    M
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR-M 538

Query: 448 ESYL--IDMYAKSGLIKTARQIFE 469
           E Y   +D+Y ++G +  A+++ +
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLID 562


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/588 (33%), Positives = 322/588 (54%), Gaps = 60/588 (10%)

Query: 266 ASSAIFMYAELGCF---DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           A+S +F  A    F   D+ARK+FD   + N   WN +I     ++ P++++ +F+++L 
Sbjct: 173 AASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLH 232

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
                 +  TF   + AV++ +   +G+ +H   IK      V VLN++I          
Sbjct: 233 DSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLD 292

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        +D+VSWN+M++ FVQ G  D+ L L   M+ +G   ++VT+ +++SA
Sbjct: 293 LAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSA 352

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD---- 475
            +   N  +G++   Y+ R+ +     + +  IDM+ K G ++ AR +F+  +  D    
Sbjct: 353 CAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSW 412

Query: 476 -------------------------RDQATWNAMIAGYTQNGLLEEAFVAFR--QMLEHN 508
                                    +D   WN +I+GY Q+G  +EA   FR  Q+ +  
Sbjct: 413 TTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSG 472

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             P+ VT+ S L AC  +G +++G+ +HG+  +  +  N  + TSLIDMYSKSG +  A 
Sbjct: 473 ARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAI 532

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF  I  K+   ++ MI G   HG  E A+ LF  M+   ++P+++TF  +L ACS++G
Sbjct: 533 EVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSG 592

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LVDEG ++FD M++ Y + P T+HY C+ D+LGR G + EA +F++ +    +   +WG+
Sbjct: 593 LVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSA-SVWGA 651

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LLG+C +HG+ ELAE    +LLE++  N   G +VLLSN+YA+ G+WE V ++R++MR+ 
Sbjct: 652 LLGACCIHGNLELAEKACSRLLEIEPGNH--GAYVLLSNLYAKTGDWEGVSELRQQMRDS 709

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           GL+KE GCS I++ G V+ F   D  HP S  IY  L+ +   +R+ G
Sbjct: 710 GLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHG 757



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 244/545 (44%), Gaps = 85/545 (15%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRL---SKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QIH+      KL  P   S L   +          AR++FD I +P    WN +I  
Sbjct: 154 QLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRA 213

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
              ++ P +++L++ +M   SP+   + +T+  ++KA AE R   +GKAVH   I+    
Sbjct: 214 LATSSDPIQSVLVFIRMLHDSPFGP-NKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFG 272

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR--RRNVVAWNTI 197
              FV NSL++ Y++C                     DL   VF+ +    +++V+WN++
Sbjct: 273 DDVFVLNSLIHFYASC------------------GHLDLAYLVFEMIEGNNKDIVSWNSM 314

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS-----SLG----DY------ 242
           V+ +V+     +A+  F  M   G+ P+ ++ V+V  A +     +LG    DY      
Sbjct: 315 VTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEM 374

Query: 243 ----KSADVVYGLLVKLGSEYV----------NDLFVASSAIFMYAELGCFDFARKIFDN 288
                  +    + VK G   +           D+   ++ I  YA++     AR IFD+
Sbjct: 375 MMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDS 434

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELD 347
              ++   WN +I GY Q+  P EA+ +F ++ L       D VT LS LSA +QL  +D
Sbjct: 435 MPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMD 494

Query: 348 LGQQLHAYIIKNFVAL--------------------PVIVLNAVIERDVVSWNTMISAFV 387
           +G+ +H YI K  + L                     + V +++  +DV  W+ MI+   
Sbjct: 495 IGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLA 554

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI---- 442
            +G  +  + L  +MQ+     +SVT T LL A S+    D GK+    + R +G+    
Sbjct: 555 MHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKT 614

Query: 443 -HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            H+    S ++D+  ++G ++ A +  E         + W A++     +G LE A  A 
Sbjct: 615 KHY----SCMVDVLGRAGHLEEALKFIEGMPLAP-SASVWGALLGACCIHGNLELAEKAC 669

Query: 502 RQMLE 506
            ++LE
Sbjct: 670 SRLLE 674



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 202/461 (43%), Gaps = 57/461 (12%)

Query: 291 ERNTEVWNTMIG-GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV-------SQ 342
           E+  E W   IG   VQ++ P  A      V   D  +F   T    L  +       ++
Sbjct: 110 EKEKEEWINSIGRSIVQHSSPTPASATATNVG--DRALFQQCTSFKQLKQIHAQMLRTNK 167

Query: 343 LQELDLGQQLH-AYIIKNFVALPVI--VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
           L +     +L  A    +F AL     V + + + ++ SWN +I A   +    + +++ 
Sbjct: 168 LHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVF 227

Query: 400 YEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY----LIDM 454
             M     F  +  T   L+ A +  R   VGK  H   ++      G + +    LI  
Sbjct: 228 IRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSF---GDDVFVLNSLIHF 284

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YA  G +  A  +FE  +  ++D  +WN+M+ G+ Q G  ++A   F +M    V PN V
Sbjct: 285 YASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAV 344

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+ SV+ AC    N+ LG+++  +  R  +  N+ V  + IDM+ K G +  A  +F  +
Sbjct: 345 TMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404

Query: 575 PEKNSVTYTTMILGYG-------------------------------QHGMSERALSLFR 603
            +++ V++TT+I GY                                Q G  + AL++FR
Sbjct: 405 EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFR 464

Query: 604 SMK--GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
            ++    G  PD +T ++ LSAC+  G +D G  I   +++E +IQ +      + DM  
Sbjct: 465 ELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE-RIQLNRNLATSLIDMYS 523

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           + G V +A E    +G +   + +W +++    +HG  E A
Sbjct: 524 KSGDVEKAIEVFHSIGNKD--VFVWSAMIAGLAMHGRGEAA 562


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 230/733 (31%), Positives = 382/733 (52%), Gaps = 51/733 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR+LF  I  P  V WN +I G        EAI  + ++KK+    +    +  S
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT--RSSLGS 314

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL A A    L  G  VH    +   + + +V ++L+NMY+ C                 
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKC----------------- 357

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            SK D   +VF+++  RN+V WN ++  + +     E +  F  M R G +P   +F ++
Sbjct: 358 -SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A +SL        ++ +++K  +++ ++LFVA++ + MYA+ G    ARK F+     
Sbjct: 417 FSACASLHYLNFGGQLHTVMIK--NKFASNLFVANALVDMYAKSGALKEARKQFELMKIH 474

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I GYVQ  +  EA  +F +++  + ++ D+V+  S +SA + +QEL  GQQ 
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVS-NGVLPDEVSLASIVSACANVQELKRGQQC 533

Query: 353 HAYIIK---------------NFVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLD 392
           H  ++K                +V   V+     V  ++  R+VVS N +I+ +    L+
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE 593

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESY 450
            E + L  E+Q  G     VT   LL         ++G+Q H  +++ G     E +   
Sbjct: 594 -EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ +Y  S     +  +F +     +    W A+I+GY Q    E+A   ++ M   N+ 
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQY-PKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+    ASVL AC  M +++ G+++H        + +    +SLIDMY+K G +  +  V
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 571 FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           F ++P +N+V ++ +MI+G  ++G +E AL +F+ M+   I PD +TF+ VLSACS+AG 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V EG ++FDLM   YK+QP  +H  C+ D+LGR G + EA EF+ +LG + + + +W +L
Sbjct: 832 VSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM-LWSTL 890

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR HG     +  A KL+E+  ++S    +VLLS+IYAE  NW     +R+EM+ +G
Sbjct: 891 LGACRKHGDEVRGKRAADKLMELKPQSSS--SYVLLSSIYAESENWSGAVSLRREMKLKG 948

Query: 750 LRKEVGCSWIDVG 762
           ++K  G SWI+ G
Sbjct: 949 VKKLPGYSWIEPG 961



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 193/730 (26%), Positives = 337/730 (46%), Gaps = 85/730 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A++ F  + +     WN+++  ++ + L    +  +  M         + +T++ 
Sbjct: 90  GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHE--VRPNEFTFAM 147

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC+  +++  G+ VHC   +       F    L++MY+ C    DA +V    + +D
Sbjct: 148 VLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLD 207

Query: 173 YSKYDLV-------------CKVFDTMRR------------------------------- 188
              +  +              KVFD M+R                               
Sbjct: 208 TVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFT 267

Query: 189 ----RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
                NVVAWN ++S + K     EA+  F  + + G++ +  S  +V  A++SL     
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
             +V+    K G +  ++++V S+ + MYA+    D A+++F++  ERN  +WN M+GG+
Sbjct: 328 GSMVHAQATKEGLD--DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN    E +E F   ++      D+ TF S  SA + L  L+ G QLH  +IKN  A  
Sbjct: 386 AQNGLAQEVMEFF-SCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + V NA+++                     D VSWN +I  +VQ   +DE   +   M  
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKT 463
            G + D V++ +++SA +N++    G+Q H  L++ G+       S LIDMY K G++  
Sbjct: 505 NGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR +F    S  R+  + NA+IAGYT  G LEEA   F+++    + P  VT A +L  C
Sbjct: 565 ARDVFYSMPS--RNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621

Query: 524 NPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVT 581
           +    + LG+Q+HG  +++  L  +  V  SL+ +Y  S     +  +F+++   K  V 
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVV 681

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T +I GY Q    E+AL  ++ M+   I PD   F +VL AC+    +  G +I  L+ 
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLI- 740

Query: 642 QEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             +    + +   C  + DM  + G V  + +  +E+    NV+  W S++     +G++
Sbjct: 741 --FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVIS-WNSMIVGLAKNGYA 797

Query: 700 ELAEVVAKKL 709
           E A  + K++
Sbjct: 798 EEALEIFKQM 807



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 213/464 (45%), Gaps = 66/464 (14%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P L +L    +A V++   +K+G        + +  + +Y + G  DFA+K F    +++
Sbjct: 52  PVLQAL---STAKVIHSKSLKIGVGLKG--LLGNVIVDLYVKCGNVDFAQKAFSRLEKKD 106

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN+++  Y+ +      ++ FV +    E+  ++ TF   LSA S LQ+++ G+Q+H
Sbjct: 107 VFAWNSVLSMYLDHGLFATVVQSFVCMWN-HEVRPNEFTFAMVLSACSGLQDVNFGRQVH 165

Query: 354 AYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
             + K                     ++    +V +  +  D VSW  +I+ +V++G   
Sbjct: 166 CGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPM 225

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E + +   MQ+ G   D +T+  +++A                                 
Sbjct: 226 EAVKVFDRMQRVGHAPDQITLVTVVNA--------------------------------- 252

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            Y   G +  AR++F +    + +   WN MI+G+ + G  EEA   F ++ +  +    
Sbjct: 253 -YVALGRLADARKLFTQIP--NPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            ++ SVL A   +  +  G  +H  + +  LD NV+VG++L++MY+K   ++ A  VF  
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNS 369

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + E+N V +  M+ G+ Q+G+++  +  F  MK  G +PD  TF ++ SAC+    ++ G
Sbjct: 370 LGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFG 429

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA---YEFVK 674
            Q+  +M +  K   +      + DM  + G + EA   +E +K
Sbjct: 430 GQLHTVMIKN-KFASNLFVANALVDMYAKSGALKEARKQFELMK 472


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/642 (31%), Positives = 337/642 (52%), Gaps = 86/642 (13%)

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           V ++++++    K + + +++  F  M   G+ P T    N+F   + L  +K+   ++ 
Sbjct: 81  VYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHC 140

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           +    G +   D FV  S   MY   G    ARK+FD   E++    + ++ GY +    
Sbjct: 141 VACVSGLDM--DAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKG-- 196

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
              +E  V++L                   S++++                        +
Sbjct: 197 --CLEEVVRIL-------------------SEMEK------------------------S 211

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
            IE ++VSWN ++S F ++G   E +++  +M   GF  D VTV+++L +  +  N ++G
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271

Query: 431 KQTHAYLLRHGI----------------------------HFEGMESYLIDMY----AKS 458
           +Q H Y+++ G+                             FE ME+ + + Y    +++
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331

Query: 459 GLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           GL+  A ++F   K    + +  +W ++IAG  QNG   EA   FR+M    V PN VTI
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S+LPAC  +  +  G+  HGF++R  L  +V VG++LIDMY+K G I  +  VF  +P 
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN V + +++ GY  HG ++  +S+F S+    ++PD I+F ++LSAC   GL DEG + 
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F++M +EY I+P  EHY C+ ++LGR GK+ EAY+ +KE+  E +   +WG+LL SCRL 
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSC-VWGALLNSCRLQ 570

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + +LAE+ A+KL  ++  N  PG +VL+SNIYA +G W  VD +R +M   GL+K  GC
Sbjct: 571 NNVDLAEIAAQKLFHLEPEN--PGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           SWI V   V    + D+ HPQ  +I E ++ ++ EMR +G++
Sbjct: 629 SWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHR 670



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/430 (20%), Positives = 184/430 (42%), Gaps = 72/430 (16%)

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
           ++L ++ +  V S++++I A  +  L  + + +   M   G + D+  +  L    + L 
Sbjct: 71  LILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELS 130

Query: 426 NQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD--------- 475
               GKQ H      G+  +  ++  L  MY + G +  AR++F++    D         
Sbjct: 131 AFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLC 190

Query: 476 ------------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
                                    +  +WN +++G+ ++G  +EA + F++M      P
Sbjct: 191 GYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCP 250

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS---------- 561
           + VT++SVLP+     N+ +G+Q+HG+ I+  L ++  V ++++DMY KS          
Sbjct: 251 DQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310

Query: 562 ---------------------GVINYAANVFAKIPEK----NSVTYTTMILGYGQHGMSE 596
                                G+++ A  +F    E+    N V++T++I G  Q+G   
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDI 370

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL LFR M+  G++P+ +T  ++L AC     +  G        + + +         +
Sbjct: 371 EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-DVHVGSAL 429

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            DM  + G+ ++  + V  +    N++  W SL+    +HG ++    + + L+    + 
Sbjct: 430 IDMYAKCGR-IKMSQIVFNMMPTKNLV-CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP 487

Query: 717 SMPGYHVLLS 726
               +  LLS
Sbjct: 488 DFISFTSLLS 497



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 111/505 (21%), Positives = 211/505 (41%), Gaps = 86/505 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +  SI  PT   ++++I       L  ++I ++S+M         D +   ++ K C
Sbjct: 69  ADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIP--DTHVLPNLFKVC 126

Query: 118 AETRNLRIGKAVHCHFIRCFS--NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD--- 172
           AE    + GK +HC  + C S  +   FV  SL +MY  C    DA  V  +  E D   
Sbjct: 127 AELSAFKAGKQIHC--VACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVT 184

Query: 173 -------YSK---YDLVCKVFDTMRRR----NVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                  Y++    + V ++   M +     N+V+WN I+S + ++  + EAV  F+ M 
Sbjct: 185 CSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMH 244

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
            +G  P  ++  +V P++    +      ++G ++K G   + D  V S+ + MY + G 
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQG--LLKDKCVISAMLDMYGKSGH 302

Query: 279 FDFARKIFDN--------C---------------------------LERNTEVWNTMIGG 303
                K+FD         C                           +E N   W ++I G
Sbjct: 303 VYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAG 362

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
             QN   +EA+ELF + +++  +  + VT  S L A   +  L  G+  H + ++     
Sbjct: 363 CAQNGKDIEALELFRE-MQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421

Query: 359 ---------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                            + +  IV N +  +++V WN++++ +  +G   E + +   + 
Sbjct: 422 DVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLM 481

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LIDMYAKSGL 460
           +     D ++ T+LLSA   +   D G K  +     +GI    +E Y  ++++  ++G 
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPR-LEHYSCMVNLLGRAGK 540

Query: 461 IKTARQIFEKNDSGDRDQATWNAMI 485
           ++ A  +  K    + D   W A++
Sbjct: 541 LQEAYDLI-KEIPFEPDSCVWGALL 564



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/449 (21%), Positives = 191/449 (42%), Gaps = 47/449 (10%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-D 106
           K C E    +  ++  S   P  V WN I+ GF  +    EA++++ +M        C D
Sbjct: 195 KGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHH---LGFCPD 251

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
             T SSVL +  ++ NL +G+ +H + I+      + V +++L+MY          + G+
Sbjct: 252 QVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGK-----SGHVYGI 306

Query: 167 KYVEVDYSKYDL-VCKVFDTMRRRN---------------------VVAWNTIVSWYVKT 204
             +  ++   +  VC  + T   RN                     VV+W +I++   + 
Sbjct: 307 IKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQN 366

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
            + +EA+  FR M   G++P+ ++  ++ PA  ++         +G  V++    ++D+ 
Sbjct: 367 GKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRV--HLLDDVH 424

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V S+ I MYA+ G    ++ +F+    +N   WN+++ GY  +    E + +F  ++   
Sbjct: 425 VGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMR-T 483

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
            +  D ++F S LSA  Q+   D G +    + + +   P           +  ++ M++
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKP----------RLEHYSCMVN 533

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              + G   E   L+ E+    F  DS    ALL++     N D+ +     L       
Sbjct: 534 LLGRAGKLQEAYDLIKEIP---FEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPEN 590

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDS 473
            G    + ++YA  G+      I  K +S
Sbjct: 591 PGTYVLMSNIYAAKGMWTEVDSIRNKMES 619


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 235/717 (32%), Positives = 356/717 (49%), Gaps = 85/717 (11%)

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
           P   + + S    S PY    ++   ++L  C   + L+  K +H   I+   + + F  
Sbjct: 7   PVSTLQVLSFSDPSPPYKLVHDHPSLTLLSNC---KTLQTLKQIHSQIIKTGLHNTHFAL 63

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           + L+     C  S   ++            Y L   +F T+R  N V WN ++     +E
Sbjct: 64  SKLIEF---CAVSPHGDL-----------SYAL--SLFKTIRNPNHVIWNHMIRGLSSSE 107

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
               A+  +  M+  G  P+  +F ++F + + +        V+  ++KLG E+  + FV
Sbjct: 108 SPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEH--NAFV 165

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            +S I MYA+ G    AR +FD    R+   +  +I GY       EA ELF      DE
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELF------DE 219

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
           I                                     PV        RDVVSWN MIS 
Sbjct: 220 I-------------------------------------PV--------RDVVSWNAMISG 234

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHF 444
           + Q+G  +E +    EM++     +  T+ ++LSA A +  +  +G    +++   G+  
Sbjct: 235 YAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGS 294

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + LIDMY K G ++ A  +FEK    D++  +WN MI GYT     +EA   FR+
Sbjct: 295 NIRLVNGLIDMYVKCGDLEEASNLFEKIQ--DKNVVSWNVMIGGYTHMSCYKEALGLFRR 352

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKS 561
           M++ N+ PN VT  S+LPAC  +G ++LGK +H +  + +  +   V + TSLIDMY+K 
Sbjct: 353 MMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKC 412

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +  A  +F  +  K+  T+  MI G+  HG ++ AL LF  M   G  PD ITFV VL
Sbjct: 413 GDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVL 472

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--ELGEE 679
           +AC +AGL+  G + F  M Q+YK+ P   HY C+ D+ GR G   EA   VK  E+  +
Sbjct: 473 TACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPD 532

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
           G    IW SLLG+CR+H   ELAE VAK L E++  N  P  +VLLSNIYA  G WE+V 
Sbjct: 533 G---AIWCSLLGACRIHRRIELAESVAKHLFELEPEN--PSAYVLLSNIYAGAGRWEDVA 587

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K+R  + +  ++K  GCS I+V   V+ F   D+ HPQS++IY+ML+ + M +  AG
Sbjct: 588 KIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 246/530 (46%), Gaps = 59/530 (11%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQ---EGRPHLARQLFDSITRPTTVIWNTIIIGF 80
           L QIHS         T    S+L + C     G    A  LF +I  P  VIWN +I G 
Sbjct: 44  LKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGL 103

Query: 81  VCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNP 140
             +  P+ A+  Y  M  S   T  + YT+ S+ K+C + R    GK VH H ++     
Sbjct: 104 SSSESPFLALEYYVHMISSG--TEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEH 161

Query: 141 SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY-------------DLVCKVFDTMR 187
           + FV+ SL+NMY+     ++A +V  K    D   +             D   ++FD + 
Sbjct: 162 NAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIP 221

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            R+VV+WN ++S Y ++ R  EA+  F  M R  + P+  + ++V  A +  G    + +
Sbjct: 222 VRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSG----SSL 277

Query: 248 VYGLLVK-------LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             G  V+       LGS    ++ + +  I MY + G  + A  +F+   ++N   WN M
Sbjct: 278 QLGNWVRSWIEDRGLGS----NIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVM 333

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI---- 356
           IGGY   +   EA+ LF ++++   I  +DVTFLS L A + L  LDLG+ +HAY+    
Sbjct: 334 IGGYTHMSCYKEALGLFRRMMQ-SNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNM 392

Query: 357 --IKNFVALPVIVLN--------AVIER--------DVVSWNTMISAFVQNGLDDEGLML 398
             +KN VAL   +++        AV +R         + +WN MIS F  +G  D  L L
Sbjct: 393 KSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGL 452

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYA 456
              M  +GF+ D +T   +L+A  +     +G++  + +++       +  Y  +ID++ 
Sbjct: 453 FSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFG 512

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++GL   A  +  KN     D A W +++     +  +E A    + + E
Sbjct: 513 RAGLFDEAETLV-KNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFE 561



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 192/408 (47%), Gaps = 45/408 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS--SPYTSCDNYTYSSVLK 115
           AR+LFD I     V WN +I G+  +    EA+  + +M+++  +P  S    T  SVL 
Sbjct: 213 ARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVS----TMLSVLS 268

Query: 116 ACAET-RNLRIGKAVHCHF-IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           ACA++  +L++G  V      R   +  R V N L++MY  C    +A            
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV-NGLIDMYVKCGDLEEAS----------- 316

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +F+ ++ +NVV+WN ++  Y     Y EA+  FR M++  I P+ ++F+++ 
Sbjct: 317 -------NLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSIL 369

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           PA ++LG       V+  + K      N + + +S I MYA+ G    A++IFD    ++
Sbjct: 370 PACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS 429

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI G+  + H   A+ LF ++   +  V DD+TF+  L+A      L LG++  
Sbjct: 430 LATWNAMISGFAMHGHTDTALGLFSRMTS-EGFVPDDITFVGVLTACKHAGLLSLGRRYF 488

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
           + +I+++   P           +  +  MI  F + GL DE   LV  M+ +    D   
Sbjct: 489 SSMIQDYKVSP----------KLPHYGCMIDLFGRAGLFDEAETLVKNMEMKP---DGAI 535

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
             +LL A    R  ++ +    +L    +  E   +Y++  ++YA +G
Sbjct: 536 WCSLLGACRIHRRIELAESVAKHLFE--LEPENPSAYVLLSNIYAGAG 581


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 229/761 (30%), Positives = 388/761 (50%), Gaps = 50/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +F+ +     V WN ++  +      ++ A+ L+++M         +  T+ +VL +
Sbjct: 112 AQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEG--VKANVITFLNVLNS 169

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
             +   LR GK +H        +   FV  +L+N Y+ C S  DA               
Sbjct: 170 VVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR-------------- 215

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVFD M  R+V  WN+++S Y  +ER  EA   F+ M + G R   ++F+++  A 
Sbjct: 216 ----KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDAC 271

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +    +    V   + +   E   DLFV ++ I MYA     + A ++F    + N   
Sbjct: 272 VNPETLQHGKHVRESISETSFEL--DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLIT 329

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ +I  +  + H  EA+  F ++++ + I+ + VTF+S L+  +    L+   ++H  I
Sbjct: 330 WSAIITAFADHGHCGEALRYF-RMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLI 388

Query: 357 IKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGL 396
            ++ +     + NA++                      +++SWN+MI  +VQ    D+ L
Sbjct: 389 TEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDAL 448

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMY 455
            L   MQ+QG   D V    +L A +   +    K  H  +   G+    + ++ L++MY
Sbjct: 449 QLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMY 508

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK+G +  A  I ++ D  ++    WN +I GY  +G   EA  A++++    +  + VT
Sbjct: 509 AKAGELDVAEVILQEMD--EQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVT 566

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             SVL AC    ++  GK +H  ++   LD +V V  +L +MYSK G +  A  +F  +P
Sbjct: 567 FISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP 626

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            +++V++  M+  Y QHG SE  L L R M+  G++ + ITFV+VLS+CS+AGL+ EG Q
Sbjct: 627 IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ 686

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            F  +  +  I+  TEHY C+ D+LGR GK+ EA +++ ++  E  ++  W SLLG+CR+
Sbjct: 687 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIV-TWASLLGACRV 745

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
               +  ++ A KLLE+D  NS     V+LSNIY+E G+W+N  K+R+ M  R ++K  G
Sbjct: 746 QKDLDRGKLAAGKLLELDPGNSSAS--VVLSNIYSERGDWKNAAKLRRAMASRRVKKVPG 803

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            S I V   V+ F  +D  HP++ +IY+ +E L   MR AG
Sbjct: 804 ISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAG 844



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 275/599 (45%), Gaps = 51/599 (8%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAE 119
           F  I     V WN +I  +       EA+ L+  M  +  +P    +  T  +VL +C  
Sbjct: 15  FGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAP----NAITLVAVLNSCGS 70

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
            R LR G  VH   +      +  V  +LLNMY  C + LDA+                 
Sbjct: 71  FRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQ----------------- 113

Query: 180 CKVFDTMRRRNVVAWNTIVSWY-VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             VF+ M  +NVV WN ++  Y ++   +  AV  F  ML  G++ + I+F+NV  ++  
Sbjct: 114 -SVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVD 172

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
               +    ++  + +  SE+  D+FV ++ +  Y + G    ARK+FD    R+   WN
Sbjct: 173 PDALRKGKFIHSCVRE--SEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWN 230

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           +MI  Y  +    EA  +F ++ +  E   D VTFLS L A    + L  G+ +   I +
Sbjct: 231 SMISAYSISERSGEAFFIFQRMQQEGERC-DRVTFLSILDACVNPETLQHGKHVRESISE 289

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
               L + V  A+I                    + ++++W+ +I+AF  +G   E L  
Sbjct: 290 TSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRY 349

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAK 457
              MQ++G + + VT  +LL+  +     +   + H  +  HG+     M + L+++Y +
Sbjct: 350 FRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGR 409

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
                 AR +F++ +    +  +WN+MI  Y Q    ++A   FR M +  + P+ V   
Sbjct: 410 CESPDDARTVFDQLELP--NLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFM 467

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ++L AC    +    K +H       L  +  V TSL++MY+K+G ++ A  +  ++ E+
Sbjct: 468 TILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQ 527

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
               +  +I GY  HG S  AL  ++ ++   I  D +TF++VL+AC+ +  + EG  I
Sbjct: 528 QITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMI 586



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 260/549 (47%), Gaps = 30/549 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           F  +R RNVV+WN ++S Y   + + EA+  F  ML  G+ P+ I+ V V  +  S  + 
Sbjct: 15  FGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFREL 74

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +   +V+ L ++ G  +  +  VA++ + MY + G    A+ +F+   E+N   WN M+G
Sbjct: 75  RDGILVHALSLERG--FFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLG 132

Query: 303 GY-VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            Y +Q      A+ELF ++L L+ +  + +TFL+ L++V     L  G+ +H+ + ++  
Sbjct: 133 VYSLQGCCWKLAVELFTRML-LEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEH 191

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
           +L V V  A++                     R V +WN+MISA+  +    E   +   
Sbjct: 192 SLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQR 251

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           MQ++G   D VT  ++L A  N      GK     +       +  + + LI MYA+   
Sbjct: 252 MQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRS 311

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
            + A Q+F +      +  TW+A+I  +  +G   EA   FR M +  + PN VT  S+L
Sbjct: 312 PEDAAQVFGRMK--QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLL 369

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
                   +E   ++H     + LD    +  +L+++Y +    + A  VF ++   N +
Sbjct: 370 NGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLI 429

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++ +MI  Y Q    + AL LFR+M+  GI+PD + F+ +L AC+  G      ++    
Sbjct: 430 SWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTI-GSHGRTRKLVHQC 488

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            +E  +  S      + +M  + G++  A   ++E+ E+   +  W  L+    LHG S 
Sbjct: 489 VEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQ--ITAWNVLINGYALHGRSR 546

Query: 701 LAEVVAKKL 709
            A    +KL
Sbjct: 547 EALEAYQKL 555



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 233/537 (43%), Gaps = 80/537 (14%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  A Q+F  + +   + W+ II  F  +    EA+  +  M++       +  T+ S+L
Sbjct: 312 PEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP--NRVTFISLL 369

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
                   L     +H        + +  + N+L+N+Y  C S  DA             
Sbjct: 370 NGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDAR------------ 417

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                  VFD +   N+++WN+++  YV+ ER+ +A++ FR M + GI+P  ++F+ +  
Sbjct: 418 ------TVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILG 471

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +     ++  +V+  + + G        V +S + MYA+ G  D A  I     E+  
Sbjct: 472 ACTIGSHGRTRKLVHQCVEESG--LGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQI 529

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GY  +    EA+E + Q L+L+ I  D VTF+S L+A +    L  G+ +H+
Sbjct: 530 TAWNVLINGYALHGRSREALEAY-QKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS 588

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
             ++  +   VIV NA+                      R  VSWN M+ A+ Q+G  +E
Sbjct: 589 NAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEE 648

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L+ +M+++G  ++ +T  ++LS+ S           HA L+  G        Y   +
Sbjct: 649 VLKLIRKMEQEGVKLNGITFVSVLSSCS-----------HAGLIAEGCQ------YFHSL 691

Query: 455 YAKSGL-IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
               G+ +KT                 +  ++    + G L+EA     +M    + P +
Sbjct: 692 GHDRGIEVKTEH---------------YGCLVDLLGRAGKLQEAEKYISKM---PLEPGI 733

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           VT AS+L AC    +++ GK   G  +  L   N      L ++YS+ G    AA +
Sbjct: 734 VTWASLLGACRVQKDLDRGKLAAG-KLLELDPGNSSASVVLSNIYSERGDWKNAAKL 789



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 250/581 (43%), Gaps = 84/581 (14%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY+  G    A   F     RN   WN MI  Y       EA+ LF  +L L+ +  + +
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAML-LEGVAPNAI 59

Query: 332 TFLSALSAVSQLQELDLGQQLHA------YIIKNFVALPVI--------------VLNAV 371
           T ++ L++    +EL  G  +HA      +     VA  ++              V   +
Sbjct: 60  TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119

Query: 372 IERDVVSWNTMISAF-VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
            E++VV+WN M+  + +Q       + L   M  +G   + +T   +L++  +      G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179

Query: 431 KQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           K  H+  +R   H     + + L++ Y K G +  AR++F+      R   TWN+MI+ Y
Sbjct: 180 KFIHS-CVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC--RSVGTWNSMISAY 236

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           + +    EAF  F++M +     + VT  S+L AC     ++ GK +         + ++
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           FVGT+LI MY++      AA VF ++ + N +T++ +I  +  HG    AL  FR M+  
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQE 356

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR------ 662
           GI P+ +TF+++L+  +    ++E L    L+  E+ +  +T     + ++ GR      
Sbjct: 357 GILPNRVTFISLLNGFTTPSGLEE-LSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415

Query: 663 -------------------VGKVVE------AYEFVKELGEEG------NVLEIWGSLLG 691
                              +G  V+      A +  + + ++G      N + I    LG
Sbjct: 416 ARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTI----LG 471

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C +  H    ++V  + +E       P     L N+YA+ G  +  + + +EM E+ + 
Sbjct: 472 ACTIGSHGRTRKLV-HQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQIT 530

Query: 752 KEVGCSW-IDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
                +W + + GY          H +S +  E  ++L +E
Sbjct: 531 -----AWNVLINGYA--------LHGRSREALEAYQKLQLE 558



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 28/323 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           +L +IH L        T T+R+ L  +   C+   P  AR +FD +  P  + WN++I  
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCES--PDDARTVFDQLELPNLISWNSMIGI 437

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +V      +A+ L+  M++       D   + ++L AC    + R  K VH         
Sbjct: 438 YVQCERHDDALQLFRTMQQQGIQP--DRVNFMTILGACTIGSHGRTRKLVHQCVEESGLG 495

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            S  V  SL+NMY+             K  E+D ++      +   M  + + AWN +++
Sbjct: 496 GSPLVQTSLVNMYA-------------KAGELDVAEV-----ILQEMDEQQITAWNVLIN 537

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            Y    R  EA+  ++ +    I    ++F++V  A +S        +++   V+ G + 
Sbjct: 538 GYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD- 596

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            +D+ V ++   MY++ G  + AR+IFD+   R+   WN M+  Y Q+    E ++L ++
Sbjct: 597 -SDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL-IR 654

Query: 320 VLELDEIVFDDVTFLSALSAVSQ 342
            +E + +  + +TF+S LS+ S 
Sbjct: 655 KMEQEGVKLNGITFVSVLSSCSH 677


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 246/778 (31%), Positives = 409/778 (52%), Gaps = 71/778 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLK 115
           AR++F+ I   T+  WN+II  +        A  L+S M++ +   +C  + YT+ S++ 
Sbjct: 197 ARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVT 256

Query: 116 -ACA---------ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            AC+         E    RI K+    F++       +V ++L++ ++            
Sbjct: 257 VACSLVDCGLTLLEQMLARIEKS---SFVK-----DLYVGSALVSGFA------------ 296

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP 224
            +Y  +D +K      +F+ M  RN V  N ++    +  +  EA + F+ M  +  I  
Sbjct: 297 -RYGLIDSAKM-----IFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINA 350

Query: 225 STIS-FVNVFPALSSLGDYK-SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           S+ +  ++ F   S+L + K     V+  L++     V  + + ++ + +YA+    D A
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVW-ILIGNALVNLYAKCNAIDNA 409

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R IF     ++T  WN++I G   N    EA+  F   +  + +V    + +S LS+ + 
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACF-HTMRRNGMVPSKFSVISTLSSCAS 468

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
           L  + LGQQ+H   IK  + L V V NA++                    E D VSWN+ 
Sbjct: 469 LGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSF 528

Query: 383 ISAFVQNGLDD-EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           I A   +     + +    EM + G+  + VT   +LSA S+L   ++G+Q HA +L+H 
Sbjct: 529 IGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHS 588

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  +  +E+ L+  Y K   ++    IF +  S  RD+ +WNAMI+GY  NG+L +A   
Sbjct: 589 VADDNAIENTLLAFYGKCEQMEDCEIIFSRM-SERRDEVSWNAMISGYIHNGILHKAMGL 647

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M++     +  T+A+VL AC  +  +E G ++H  +IR  L+  V VG++L+DMY+K
Sbjct: 648 VWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAK 707

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G I+YA+  F  +P +N  ++ +MI GY +HG   +AL LF  MK  G  PD +TFV V
Sbjct: 708 CGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGV 767

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACS+ GLVDEG + F  M + Y++ P  EH+ C+ D+LGR G V +  EF+K +    
Sbjct: 768 LSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNP 827

Query: 681 NVLEIWGSLLGS-CRLHG-HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           N L IW ++LG+ CR +  ++EL    AK L+E++  N++   +VLLSN++A  G WE+V
Sbjct: 828 NAL-IWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVN--YVLLSNMHAAGGKWEDV 884

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++ R  MR   ++KE GCSW+ +   V+ F + DQ HP+  KIY+ L+ +  +MR+ G
Sbjct: 885 EEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLG 942



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 172/701 (24%), Positives = 329/701 (46%), Gaps = 69/701 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LFD + +   V W+ ++ G+  N +P EA +L+  +  +      ++Y   S L+AC
Sbjct: 93  AQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLP--NHYAIGSALRAC 150

Query: 118 AET--RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            E     L++G  +H    +        + N L++MYS C +S+D               
Sbjct: 151 QELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDAR------------ 198

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR----MGIRPSTISFVN 231
                +VF+ ++ +   +WN+I+S Y +    + A + F  M R    +  RP+  +F +
Sbjct: 199 -----RVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCS 253

Query: 232 VFPALSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +     SL D     ++  +L ++  S +V DL+V S+ +  +A  G  D A+ IF+   
Sbjct: 254 LVTVACSLVDC-GLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMD 312

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQLQELDL- 348
           +RN    N ++ G  + +   EA ++F ++ +L EI        LSA +  S L+E    
Sbjct: 313 DRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRK 372

Query: 349 GQQLHAYIIKN-FVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           GQ++HAY+I+N  V + +++ NA++                     +D VSWN++IS   
Sbjct: 373 GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
            N   +E +   + M++ G +    +V + LS+ ++L    +G+Q H   ++ G+  +  
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY-TQNGLLEEAFVAFRQML 505
           + + L+ +YA++  ++  +++F      + DQ +WN+ I    T    + +A   F +M+
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMP--EYDQVSWNSFIGALATSEASVLQAIKYFLEMM 550

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +    PN VT  ++L A + +  +ELG+Q+H   +++ +  +  +  +L+  Y K   + 
Sbjct: 551 QAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQME 610

Query: 566 YAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
               +F+++ E ++ V++  MI GY  +G+  +A+ L   M   G   D  T   VLSAC
Sbjct: 611 DCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSAC 670

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEG 680
           +    ++ G+++         I+   E    V     DM  + GK+  A  F  EL    
Sbjct: 671 ASVATLERGMEV-----HACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFF-ELMPVR 724

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           N+   W S++     HGH   A    K   +M     +P +
Sbjct: 725 NIYS-WNSMISGYARHGHGGKA---LKLFTQMKQHGQLPDH 761



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 201/417 (48%), Gaps = 51/417 (12%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D+F  ++ + ++   G    A+K+FD   ++N   W+ ++ GY QN  P EA  LF  +
Sbjct: 72  SDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGI 131

Query: 321 LELDEIVFDDVTFLSALSAVSQL--QELDLGQQLHAYIIKNFVALPVIVLNAVIE----- 373
           +    ++ +     SAL A  +L    L LG ++H  I K+  A  +++ N ++      
Sbjct: 132 ISAG-LLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHC 190

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI----DSVT 413
                           +   SWN++IS + + G       L   MQ++   +    +  T
Sbjct: 191 SASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYT 250

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY---------AKSGLIKTA 464
             +L++ A +L   D G      LL   +      S++ D+Y         A+ GLI +A
Sbjct: 251 FCSLVTVACSL--VDCGLT----LLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSA 304

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           + IFE+ D  DR+  T N ++ G  +    EEA   F++M +  V  N  + A +L A  
Sbjct: 305 KMIFEQMD--DRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYAVLLSAFT 361

Query: 525 PMGNIELGK----QLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
              N++ GK    ++H + IR  L+D  + +G +L+++Y+K   I+ A ++F  +P K++
Sbjct: 362 EFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDT 421

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           V++ ++I G   +   E A++ F +M+  G+ P   + ++ LS+C+  G +  G QI
Sbjct: 422 VSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 190/378 (50%), Gaps = 33/378 (8%)

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L++++ ++G + +A+++F+  +   ++  +W+ +++GY QNG+ +EA + FR ++   + 
Sbjct: 80  LVNIFVRAGNLVSAQKLFD--EMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLL 137

Query: 511 PNVVTIASVLPACNPMG--NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK-SGVINYA 567
           PN   I S L AC  +G   ++LG ++HG   +     ++ +   L+ MYS  S  I+ A
Sbjct: 138 PNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDA 197

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE----PDAITFVAVLS- 622
             VF +I  K S ++ ++I  Y + G +  A  LF SM+    E    P+  TF ++++ 
Sbjct: 198 RRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTV 257

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPST---EHYCCVADMLG--RVGKVVEAYEFVKELG 677
           ACS   LVD GL + +  Q   +I+ S+   + Y   A + G  R G ++++ + + E  
Sbjct: 258 ACS---LVDCGLTLLE--QMLARIEKSSFVKDLYVGSALVSGFARYG-LIDSAKMIFEQM 311

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVA--KKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           ++ N + + G ++G  R H   E A++    K L+E++       Y VLLS  + E  N 
Sbjct: 312 DDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINA----SSYAVLLS-AFTEFSNL 366

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           +   +  +E+    +R  +   WI +G  +    +K      +  I+++     M  ++ 
Sbjct: 367 KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQL-----MPSKDT 421

Query: 796 GNKTIQNSNVDATPRFDE 813
            +     S +D   RF+E
Sbjct: 422 VSWNSIISGLDHNERFEE 439



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E   QLH    +  L  +VF   +L++++ ++G +  A  +F ++P+KN V+++ ++ G
Sbjct: 55  VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG--LVDEGLQIFDLMQQ 642
           Y Q+GM + A  LFR +   G+ P+     + L AC   G  ++  G++I  L+ +
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 235/783 (30%), Positives = 383/783 (48%), Gaps = 143/783 (18%)

Query: 54  RPHLARQLFDSITR----------PTTVI------WNTIIIGFVCNNLPYEAILLYSQMK 97
           +P L    F  I R          PT  I      +N  I+ F        A+ L    +
Sbjct: 34  KPSLKTTFFSPIFRSCIPVRISATPTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQ 93

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           KS   T     TY SVL+ CA  ++L  GK VH                S++   S  + 
Sbjct: 94  KSELETK----TYGSVLQLCAGLKSLTDGKKVH----------------SIIKSNSVGVD 133

Query: 158 SLDAEMVGLKYVEVDYSKYDLV--CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
               E +GLK V    +  DL    +VFDTM ++NV  WN +VS Y K            
Sbjct: 134 ----EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAK------------ 177

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                                  +GD+K +  ++ ++V+ G E                 
Sbjct: 178 -----------------------IGDFKESICLFKIMVEKGIEGKRP------------- 201

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               + A ++FD   +R+   WN+MI GYV N      + ++ Q++ L  I  D  T +S
Sbjct: 202 ----ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIIS 256

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            L   +    L LG+ +H+  IK+     +   N ++                    ER+
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 316

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           VVSW +MI+ + ++G  D  ++L+ +M+K+G  +D V +T++L A +   + D GK  H 
Sbjct: 317 VVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           Y+  + +     + + L+DMYAK G ++ A  +F       +D  +WN M+         
Sbjct: 377 YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV--KDIISWNTMVG-------- 426

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
                         + P+  T+A +LPAC  +  +E GK++HG+ +R     +  V  +L
Sbjct: 427 -------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +D+Y K GV+  A  +F  IP K+ V++T MI GYG HG    A++ F  M+  GIEPD 
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           ++F+++L ACS++GL+++G + F +M+ ++ I+P  EHY C+ D+L R G + +AY+F++
Sbjct: 534 VSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIE 593

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
            L    +   IWG+LL  CR++   ELAE VA+++ E++  N+  GY+VLL+NIYAE   
Sbjct: 594 TLPIAPDA-TIWGALLCGCRIYHDIELAEKVAERVFELEPENT--GYYVLLANIYAEAEK 650

Query: 735 WENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS-KDQEHPQSHKIYEMLERLAMEMR 793
            E V ++R+++ ++GLRK  GCSWI++ G VN F S  +  HP S KI  +L+++  +M+
Sbjct: 651 REEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMK 710

Query: 794 NAG 796
             G
Sbjct: 711 EEG 713


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 230/756 (30%), Positives = 375/756 (49%), Gaps = 147/756 (19%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ +L+     ++   G++VHC  I+   +   ++ N+L+  Y        A+   L++ 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFY--------AKTGSLRFA 64

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV--------------------- 208
                       VFD M  ++  +WNT++S Y K   +                      
Sbjct: 65  H----------HVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114

Query: 209 ----------EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV---VYGLLVKL 255
                      A+  F  M+   + PS  +  NV   LSS    ++ D+   ++  +VKL
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV---LSSCAANQTLDIGRKIHSFVVKL 171

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G    + + VA+S + MYA+ G    A+ +FD    +N   WN +I  Y+Q+        
Sbjct: 172 G--LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ------ 223

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERD 375
                 EL               A SQ +++                          +RD
Sbjct: 224 -----FEL---------------AASQFEKMP-------------------------DRD 238

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           +VSWN+MIS + Q G + E L++  +M  +     D+ T+ ++LSA +NL   ++GKQ H
Sbjct: 239 IVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH 298

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSG------------------- 474
           AY+LR      G + + LI MYAKSG ++ AR I E N +                    
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358

Query: 475 ------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                       DRD   W AMI GY QNGL  +A   FR M+     PN  T+A++L  
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSV 418

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP--EKNSV 580
            + +  +E GKQ+H  +I+        V  +LI MY+K+G IN A  VF  +P  +K  V
Sbjct: 419 SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIV 477

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++T+MI+   QHG+ + A++LF  M   G++PD IT+V VLSAC++ GLV++G + +++M
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            + ++I+P+  HY C+ D+ GR G + EAY F++ +  E + +  WGSLL SC++H +++
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIA-WGSLLASCKIHKNAD 596

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           LA+V A++LL +D  NS  G ++ L+N+Y+  G WEN  + RK M++RG+RKE G SWI 
Sbjct: 597 LAKVAAERLLLIDPGNS--GAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIH 654

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   V+ F  +D  HPQ  +IY+++  +  E++  G
Sbjct: 655 IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMG 690



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 256/583 (43%), Gaps = 84/583 (14%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY 87
           H +   +P   T +  + +S   ++G   ++R+L   +     V W  II+G+    L  
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            AI ++++M   S       +T S+VL +CA  + L IG+ +H   ++        V  S
Sbjct: 125 NAIWMFAKM--ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATS 182

Query: 148 LLNMYSTCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           LLNMY+ C   + A++V              L  + +   +++L    F+ M  R++V+W
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           N+++S Y +    +EA+  F  ML    ++P   +  ++  A ++L        ++  ++
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302

Query: 254 KLGSEYVN-------------------------------DLFVASSAIFMYAELGCFDFA 282
           +  +E                                  ++   +S +  Y +LG    A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF-VQVLELDEIVFDDVTFLSALSAVS 341
           R+IF+   +R+   W  MI GYVQN    +A+ELF + V E  E   +  T  + LS  S
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP--NSYTLAAMLSVSS 420

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWN 380
            L  L+ G+Q+HA  IK   +    V NA+I                     ++++VSW 
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR- 439
           +MI A  Q+GL  E + L   M   G   D +T   +LSA +++   + G++ +  +   
Sbjct: 481 SMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEV 540

Query: 440 HGI-----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           H I     H+  M    ID+Y ++GL++ A  +F ++   + D   W +++A    +   
Sbjct: 541 HEIEPTLSHYACM----IDLYGRAGLLQEA-YLFIESMPIEPDNIAWGSLLASCKIHKNA 595

Query: 495 EEAFVAFRQML--EHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           + A VA  ++L  +   +   + +A+V  AC    N    ++L
Sbjct: 596 DLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKL 638



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 211/455 (46%), Gaps = 34/455 (7%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   Q G+  LA   F+ +     V WN++I G+       EA++++S+M  + 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKML-NE 268

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC----L 156
           P    DN+T +S+L ACA    L IGK +H + +R  +  S  V N+L++MY+      +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 157 SSLDAE--------MVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTE 205
           + L  E        ++    +   Y+K   V    ++F+ +R R+VVAW  ++  YV+  
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            + +A+  FR+M+  G  P++ +   +    SSL   +    ++   +K G        V
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS--V 446

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELD 324
            ++ I MYA+ G  + A+++FD    +   V W +MI    Q+    EAI LF ++L + 
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
            +  D +T++  LSA + +  ++ G++ +  + +             IE  +  +  MI 
Sbjct: 507 -MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH----------EIEPTLSHYACMID 555

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + + GL  E  + +  M  +    D++   +LL++    +N D+ K     LL      
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEP---DNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 445 EGMESYLIDMYAKSGLIKTARQIFE-KNDSGDRDQ 478
            G    L ++Y+  G  + A Q  +   D G R +
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 325/649 (50%), Gaps = 86/649 (13%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           V D +   NV +++T++  + K  ++  A+  F  ML  G+ P      +   A + L  
Sbjct: 70  VLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSA 129

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            K A  V+G+    G  + +D FV SS + MY +      A ++FD   E +   W+ ++
Sbjct: 130 LKPARQVHGIASVSG--FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             Y +     EA  LF ++ +                                       
Sbjct: 188 AAYARQGCVDEAKRLFSEMGD--------------------------------------- 208

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                   + ++ +++SWN MI+ F  +GL  E +++  +M  +GF  D  T++++L A 
Sbjct: 209 --------SGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260

Query: 422 SNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGD----- 475
            +L +  +G   H Y+++ G +  + + S LIDMY K        Q+F++ D  D     
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320

Query: 476 ----------------------RDQA------TWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                                 +DQ       +W +MIA  +QNG   EA   FR+M   
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA 380

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V PN VTI  +LPAC  +  +  GK  H FS+R  +  +V+VG++LIDMY+K G I  +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQAS 440

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
              F  IP KN V +  +I GY  HG ++ A+ +F  M+  G +PD I+F  VLSACS +
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GL +EG   F+ M  +Y I+   EHY C+  +L R GK+ +AY  ++ +    +   +WG
Sbjct: 501 GLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDAC-VWG 559

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL SCR+H +  L EV A+KL E++  N  PG ++LLSNIYA +G W  V++VR  M+ 
Sbjct: 560 ALLSSCRVHNNVSLGEVAAEKLFELEPSN--PGNYILLSNIYASKGMWNEVNRVRDMMKN 617

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +GLRK  GCSWI+V   V+   + D+ HPQ  +I E L++L+MEM+  G
Sbjct: 618 KGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLG 666



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 127/566 (22%), Positives = 218/566 (38%), Gaps = 147/566 (25%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  + D +  P    ++T+I  F   +  + A+  +SQM         DN    S +KAC
Sbjct: 67  ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP--DNRVLPSAVKAC 124

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L+  + VH        +   FV +SL++MY  C    DA                
Sbjct: 125 AGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH--------------- 169

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF-------- 229
              +VFD M   +VV+W+ +V+ Y +     EA R F  M   G++P+ IS+        
Sbjct: 170 ---RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226

Query: 230 ---------------------------VNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                                       +V PA+  L D     +++G ++K G   V+D
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQG--LVSD 284

Query: 263 LFVASSAIFMYAELGCFDFARKIFD--------NC------LERNTEV------------ 296
             V+S+ I MY +  C     ++FD        +C      L RN +V            
Sbjct: 285 KCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKD 344

Query: 297 ---------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                    W +MI    QN   +EA+ELF + +++  +  + VT    L A   +  L 
Sbjct: 345 QGMELNVVSWTSMIACCSQNGRDIEALELFRE-MQIAGVKPNSVTIPCLLPACGNIAALM 403

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+  H + ++  ++  V V +A+I+                    +++V WN +I+ + 
Sbjct: 404 HGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYA 463

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            +G   E + +   MQ+ G   D ++ T +LSA S                + G+  EG 
Sbjct: 464 MHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACS----------------QSGLTEEG- 506

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             Y   M +K G+                    +  M+   ++ G LE+A+   R+M   
Sbjct: 507 SYYFNSMSSKYGIEARVEH--------------YACMVTLLSRAGKLEQAYAMIRRM--- 549

Query: 508 NVTPNVVTIASVLPACNPMGNIELGK 533
            V P+     ++L +C    N+ LG+
Sbjct: 550 PVNPDACVWGALLSSCRVHNNVSLGE 575



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 26/312 (8%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDN 107
           C +    L  ++ DS  +P  + WN +I GF  + L  EA+L++  M  +   P    D 
Sbjct: 195 CVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEP----DG 250

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------------ 155
            T SSVL A  +  +L +G  +H + I+      + V ++L++MY  C            
Sbjct: 251 TTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQ 310

Query: 156 -----LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
                + S +A + GL       S   L  ++ D     NVV+W ++++   +  R +EA
Sbjct: 311 MDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEA 370

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  FR M   G++P++++   + PA  ++         +   ++ G     D++V S+ I
Sbjct: 371 LELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIS--TDVYVGSALI 428

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+ G    +R  FD    +N   WN +I GY  +    EA+E+F  +++      D 
Sbjct: 429 DMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIF-DLMQRSGQKPDI 487

Query: 331 VTFLSALSAVSQ 342
           ++F   LSA SQ
Sbjct: 488 ISFTCVLSACSQ 499



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 114/231 (49%), Gaps = 3/231 (1%)

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
           ++DSV  T      S   +    +Q HA++L+ G+  +  + + L+  YA +     A  
Sbjct: 10  LLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL 69

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           + +     + +  +++ +I  +++      A   F QML   + P+   + S + AC  +
Sbjct: 70  VLDL--VPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGL 127

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             ++  +Q+HG +     D + FV +SL+ MY K   I  A  VF ++ E + V+++ ++
Sbjct: 128 SALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALV 187

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
             Y + G  + A  LF  M   G++P+ I++  +++  +++GL  E + +F
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMF 238



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           E    L RQL D       V W ++I     N    EA+ L+ +M+ +      ++ T  
Sbjct: 333 ESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAG--VKPNSVTIP 390

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +L AC     L  GKA HC  +R   +   +V ++L++MY+ C   + A  +       
Sbjct: 391 CLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC-GRIQASRI------- 442

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                      FD +  +N+V WN +++ Y    +  EA+  F +M R G +P  ISF  
Sbjct: 443 ----------CFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTC 492

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           V  A S  G           L + GS Y N +
Sbjct: 493 VLSACSQSG-----------LTEEGSYYFNSM 513


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 217/637 (34%), Positives = 347/637 (54%), Gaps = 40/637 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD + RR+ V+WN +++    +  + EA R  R M   G+  +T +  +   + +   
Sbjct: 48  RVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVAR 107

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  +  L +K G    N++F AS+ + +YA+ G    AR++FD   ERNT  WN +
Sbjct: 108 RPAIGAQLQSLALKSG--LANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNAL 165

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++     A+ELF++ +E + +  D+ TF S L+AV +     L  QLH  I+K  
Sbjct: 166 IAGYTESGDMASALELFLE-MEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYG 223

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGL-ML 398
            AL + VLNA I                      RD++SWN M+ A+  NG+DDE +   
Sbjct: 224 SALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFF 283

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQD-VGKQTHAYLLRHGIHFEGME---SYLIDM 454
           V  MQ+ G   D  + T+++S+ S   + D  G+  H  +++  +  EG+    + LI M
Sbjct: 284 VRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL--EGVTPVCNALIAM 341

Query: 455 YAK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           Y +   + +++ A + F  N    +D  +WN+M+ GY+Q+GL  +A   FR M   NV  
Sbjct: 342 YTRYNENCMMEDAYKCF--NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +    ++ L + + +  ++LGKQ+HG  I      N FV +SLI MYSKSG+I+ A   F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            +  + +SV +  MI GY QHG +E    LF  M       D ITFV ++++CS+AGLVD
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVD 519

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG +I + M+ +Y +    EHY C  D+ GR G++ +A + +  +  E + + +W +LLG
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAM-VWMTLLG 578

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG+ ELA  VA  L   + R      +VLLS++Y+  G W +   V++ M++RGL 
Sbjct: 579 ACRIHGNVELASDVASHLFVAEPRQH--STYVLLSSMYSGLGMWSDRATVQRVMKKRGLS 636

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           K  G SWI+V   V+ F ++D+ HP+  +IYEML  L
Sbjct: 637 KVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 262/569 (46%), Gaps = 53/569 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + R   V WN ++     +    EA  L   M       + + +   S L++ 
Sbjct: 46  ARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG--LASNTFALGSALRSA 103

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  R   IG  +    ++     + F  ++LL++Y+ C    DA                
Sbjct: 104 AVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR--------------- 148

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RN V+WN +++ Y ++     A+  F  M R G+ P   +F ++  A+ 
Sbjct: 149 ---QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
               +     ++G +VK GS     L V ++AI  Y++ G    +R+IFD   + R+   
Sbjct: 206 GPSCFLMHQ-LHGKIVKYGSAL--GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD-LGQQLHAY 355
           WN M+G Y  N    EA++ FV++++   +  D  +F S +S+ S+    D  G+ +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 356 IIKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLD 392
           +IK+ +     V NA+I                        +D VSWN+M++ + Q+GL 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLS 382

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYL 451
            + L     M  +    D    +A L ++S L    +GKQ H  ++  G    + + S L
Sbjct: 383 ADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSL 442

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MY+KSG+I  AR+ FE+ D        WNAMI GY Q+G  E   + F +ML+     
Sbjct: 443 IFMYSKSGIIDDARKSFEEADKS--SSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500

Query: 512 NVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           + +T   ++ +C+  G ++ G + L+    +Y +   +      +D+Y ++G ++ A  +
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560

Query: 571 FAKIP-EKNSVTYTTMILGYGQHGMSERA 598
              +P E +++ + T++     HG  E A
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELA 589



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 212/444 (47%), Gaps = 50/444 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   ARQ+FD +    TV WN +I G+  +     A+ L+ +M++     + D  T++S
Sbjct: 142 GRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREG--LAPDEATFAS 199

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A  E  +  +   +H   ++  S     V N+ +  YS C S  D+           
Sbjct: 200 LLTA-VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR---------- 248

Query: 173 YSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                   ++FD +   R++++WN ++  Y       EA++ F RMM   G+ P   SF 
Sbjct: 249 --------RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT 300

Query: 231 NVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAELGCFDFARKIFDN 288
           ++  + S  G D     V++GL++K   E V  +  A  A++  Y E    + A K F++
Sbjct: 301 SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS 360

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + ++T  WN+M+ GY Q+    +A++ F + +  + +  D+  F +AL + S+L  L L
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFF-RCMCSENVRTDEYAFSAALRSSSELAVLQL 419

Query: 349 GQQLHAYII------KNFVALPVIVL---NAVIE-----------RDVVSWNTMISAFVQ 388
           G+Q+H  +I       +FV+  +I +   + +I+              V WN MI  + Q
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGM 447
           +G  +   +L  EM ++   +D +T   L+++ S+    D G +  +    ++G+    M
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR-M 538

Query: 448 ESYL--IDMYAKSGLIKTARQIFE 469
           E Y   +D+Y ++G +  A+++ +
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLID 562


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 315/572 (55%), Gaps = 54/572 (9%)

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           ELG  ++AR +FD     N  VWN MI GY +   P  A+ ++ ++LE   ++ D+ T+ 
Sbjct: 65  ELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERG-VMPDEYTYP 123

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
             L   ++   +  G++LH +I+K   +  V V NA+I                    + 
Sbjct: 124 FLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKG 183

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DVV+WN MIS + ++   DE + L  EM++   +  S+T+ ++LSA S L++ +VGK+ H
Sbjct: 184 DVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243

Query: 435 AYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGD------------------ 475
            Y+    I     +E+ LIDMYA  G + TA  IF+   S D                  
Sbjct: 244 RYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVG 303

Query: 476 -----------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
                      RD  +W AMI GY Q    +E    FR+M   N+ P+  T+ S+L AC 
Sbjct: 304 LARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACA 363

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G +ELG+ +  +  +  +  + FVG +LIDMY   G +  A  +F  +P ++ +++T 
Sbjct: 364 HLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTA 423

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I G   +G  E AL +F  M    I PD +T + VL AC+++G+VD+G + F  M  ++
Sbjct: 424 VIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQH 483

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I+P+  HY C+ D+LGR G + EA+E +K +  + N + +WGSLLG+CR+H   E+AE+
Sbjct: 484 GIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSI-VWGSLLGACRVHRDEEMAEM 542

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+++LE++  N     +VLL NIYA    WE + +VRK M +RG++K  GCS I++ G 
Sbjct: 543 AAQQILELEPENG--AVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGS 600

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V+ F + DQ HPQS +IY  L+ ++++++ AG
Sbjct: 601 VHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAG 632



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 168/622 (27%), Positives = 275/622 (44%), Gaps = 110/622 (17%)

Query: 13  PPPTATPPPPQLP---------------QIHSLSPPIPKLKTPTIRSRLSKIC---QEGR 54
           PPPT  P  PQ P               QIHS +     +  P + +++   C   + G 
Sbjct: 9   PPPTHLPSLPQTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGD 68

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
              AR +FD++  P   +WN +I G+     P  A+ +Y +M +       D YTY  +L
Sbjct: 69  MEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMP--DEYTYPFLL 126

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K       ++ G+ +H H ++   + + FV N+L+++YS  LS            EV  +
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYS--LSG-----------EVSVA 173

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           +      VFD   + +VV WN ++S Y +++++ E+++ F  M RM + PS+I+ V+V  
Sbjct: 174 R-----GVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLS 228

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA-------ELGCFD------- 280
           A S L D      V+  +  L  E V  L   ++ I MYA        LG FD       
Sbjct: 229 ACSKLKDLNVGKRVHRYVKDLKIEPVRVL--ENALIDMYAACGDMDTALGIFDNMKSRDV 286

Query: 281 -----------------FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
                             AR  FD   ER+   W  MI GY+Q N   E + LF + ++ 
Sbjct: 287 ISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFRE-MQA 345

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
             I  D+ T +S L+A + L  L+LG+ + AYI KN + +   V NA+I+          
Sbjct: 346 ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEK 405

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     RD +SW  +I     NG  +E L +  +M K     D VT   +L A ++
Sbjct: 406 AIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTH 465

Query: 424 LRNQDVGKQTHAYL-LRHGI-----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
               D GK+  A +  +HGI     H+  M    +D+  ++G +K A ++  KN     +
Sbjct: 466 SGMVDKGKKFFARMTTQHGIEPNVAHYGCM----VDLLGRAGHLKEAHEVI-KNMPVKPN 520

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              W +++     +   E A +A +Q+LE  + P    +  +L  CN        ++LH 
Sbjct: 521 SIVWGSLLGACRVHRDEEMAEMAAQQILE--LEPENGAVYVLL--CNIYAACNRWEKLHE 576

Query: 538 FSIRYLLDQNV--FVGTSLIDM 557
              + ++D+ +    G SLI+M
Sbjct: 577 VR-KLMMDRGIKKTPGCSLIEM 597


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 221/731 (30%), Positives = 388/731 (53%), Gaps = 82/731 (11%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAE 162
           SCD    + +L + A   +LR+G+A+H   +R    +    V NSLL MYS C       
Sbjct: 40  SCDA---AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKC------- 89

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                 VE     +D +C V      R++V+W  + S   +     E++R    ML +G+
Sbjct: 90  ----GAVEAARRVFDQMCGV------RDLVSWTAMASCLARNGAERESLRLLGEMLELGL 139

Query: 223 RPSTISFVNVFPALSSLGDYK-SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           RP+  +      A      ++ +  VV G ++K G  +  D+ V  + I M+A  G    
Sbjct: 140 RPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGF-WGTDVSVGCALIDMFARNGDLVA 198

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A+++FD  +ER + VW  +I  YVQ     + +ELF+ +L+ D    D  +  S +SA +
Sbjct: 199 AQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLD-DGFEPDGYSMSSMISACT 257

Query: 342 QLQELDLGQQLHAYIIK------NFVALPVI-----------------VLNAVIERDVVS 378
           +L  + LGQQLH+  ++      + V+  ++                 V   +   +V+S
Sbjct: 258 ELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMS 317

Query: 379 WNTMISAFVQNGLDDEGLMLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           W  +IS +VQ+G+ +  +M ++ EM  +    + +T + LL A +NL +QD G+Q HA++
Sbjct: 318 WTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHAHV 377

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEK-----------NDSGDRDQATWNAMI 485
           L+  I H   + + L+ MYA+SG ++ AR+ F++           +   +R+ A+ ++ I
Sbjct: 378 LKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVETERNNASCSSKI 437

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
            G      +++    F             T AS+L A   +G +  G++LH  S++    
Sbjct: 438 EG------MDDGVSTF-------------TFASLLSAAASVGLLTKGQKLHALSMKAGFR 478

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            +  +  SL+ MY++ G +  A   F ++ + N +++T++I G  +HG +++ALS+F  M
Sbjct: 479 SDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDM 538

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
              G++P+ +T++AVLSACS+ GLV EG + F  MQ+++ + P  EHY C+ D+L R G 
Sbjct: 539 ILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGL 598

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           V EA +F+ E+  + + L +W +LL +CR +G++E+ E+ A  ++ ++ R+  P  +VLL
Sbjct: 599 VEEARQFINEMPCKADAL-VWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAP--YVLL 655

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SN+YA+ G W+ V ++R  MR++ L KE G SW+DVG  ++ F + D  HP +  IY  L
Sbjct: 656 SNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKL 715

Query: 786 ERLAMEMRNAG 796
             L  E+++ G
Sbjct: 716 VTLIREIKDIG 726


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 192/630 (30%), Positives = 339/630 (53%), Gaps = 31/630 (4%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           N    + +++ Y+K     +A + +  M             +V  A   +  +     V+
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           G +VK G  +  D+FV ++ I MY+E+G    AR +FD    ++   W+TMI  Y ++  
Sbjct: 148 GFVVKNG--FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF--------- 360
             EA++L ++ + +  +   ++  +S    +++L +L LG+ +HAY+++N          
Sbjct: 206 LDEALDL-LRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL 264

Query: 361 -------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                        +A    V + + +  ++SW  MI+A++     +EG+ L  +M  +G 
Sbjct: 265 CTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGM 324

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             + +T+ +L+         ++GK  HA+ LR+G      + +  IDMY K G +++AR 
Sbjct: 325 FPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARS 384

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+   S  +D   W+AMI+ Y QN  ++EAF  F  M    + PN  T+ S+L  C   
Sbjct: 385 VFDSFKS--KDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKA 442

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           G++E+GK +H +  +  +  ++ + TS +DMY+  G I+ A  +FA+  +++   +  MI
Sbjct: 443 GSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMI 502

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            G+  HG  E AL LF  M+  G+ P+ ITF+  L ACS++GL+ EG ++F  M  E+  
Sbjct: 503 SGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGF 562

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY C+ D+LGR G + EA+E +K +    N+  ++GS L +C+LH + +L E  A
Sbjct: 563 TPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNI-AVFGSFLAACKLHKNIKLGEWAA 621

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           K+ L ++   S  GY+VL+SNIYA    W +V  +R+ M++ G+ KE G S I+V G ++
Sbjct: 622 KQFLSLEPHKS--GYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLH 679

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F   D+EHP + K+YEM++ +  ++ +AG
Sbjct: 680 EFIMGDREHPDAKKVYEMIDEMREKLEDAG 709



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 160/619 (25%), Positives = 287/619 (46%), Gaps = 81/619 (13%)

Query: 16  TATPPPPQLPQIHSL-------SPPI------PKLKTPTIRSRL---------------- 46
           ++ PP P    IHS        SP +      PK   P I+  L                
Sbjct: 9   SSAPPSPLPISIHSFQNTNQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIK 68

Query: 47  -SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
            S  C    P  A + + S       I + +I  ++ NN P +A  +Y+ M+ +   T  
Sbjct: 69  TSSNCSYRVPLAALESYSS----NAAIHSFLITSYIKNNCPADAAKIYAYMRGTD--TEV 122

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           DN+   SVLKAC    +  +G+ VH   ++   +   FV N+L+ MYS   S   A ++ 
Sbjct: 123 DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLL- 181

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                            FD +  ++VV+W+T++  Y ++    EA+   R M  M ++PS
Sbjct: 182 -----------------FDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPS 224

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I  +++   L+ L D K    ++  +++ G    + + + ++ I MY +     +AR++
Sbjct: 225 EIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRV 284

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF-DDVTFLSALSAVSQLQ 344
           FD   + +   W  MI  Y+  N+  E + LFV++  L E +F +++T LS +       
Sbjct: 285 FDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKM--LGEGMFPNEITMLSLVKECGTAG 342

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
            L+LG+ LHA+ ++N   L +++  A I+                    +D++ W+ MIS
Sbjct: 343 ALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMIS 402

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           ++ QN   DE   +   M   G   +  T+ +LL   +   + ++GK  H+Y+ + GI  
Sbjct: 403 SYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKG 462

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  +++  +DMYA  G I TA ++F   ++ DRD + WNAMI+G+  +G  E A   F +
Sbjct: 463 DMILKTSFVDMYANCGDIDTAHRLFA--EATDRDISMWNAMISGFAMHGHGEAALELFEE 520

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    VTPN +T    L AC+  G ++ GK+L H     +     V     ++D+  ++G
Sbjct: 521 MEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAG 580

Query: 563 VINYAANVFAKIPEKNSVT 581
           +++ A  +   +P + ++ 
Sbjct: 581 LLDEAHELIKSMPMRPNIA 599



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 78/149 (52%)

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
           +S   + A  + +I  Y +N    +A   +  M   +   +   I SVL AC  + +  L
Sbjct: 83  ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL 142

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+++HGF ++     +VFV  +LI MYS+ G +  A  +F KI  K+ V+++TMI  Y +
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+ + AL L R M    ++P  I  +++
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISI 231


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 204/630 (32%), Positives = 345/630 (54%), Gaps = 92/630 (14%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV------------------ 296
           + +++ +++F+ +  +  Y + G F+ ARK+FD   +RNT                    
Sbjct: 46  IKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAF 105

Query: 297 -------------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                        WN M+ G+ Q++   EA+  FV  +  ++ V ++ +F SALSA + L
Sbjct: 106 NVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD-MHSEDFVLNEYSFGSALSACAGL 164

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
            +L++G Q+HA I K+   L V + +A+++                    R++VSWN++I
Sbjct: 165 TDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLI 224

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + QNG   + L +   M   G   D +T+ +++SA ++      G Q HA +++   +
Sbjct: 225 TCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKY 284

Query: 444 FEGM--ESYLIDMYAKSGLIKTARQIFEK-----------------------------ND 472
              +   + L+DMYAK   +  AR +F++                             ++
Sbjct: 285 RNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSN 344

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             +++  +WNA+IAGYTQNG  EEA   F  +   ++ P   T  ++L AC  + +++LG
Sbjct: 345 MMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLG 404

Query: 533 KQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           +Q H      GF  +   + ++FVG SLIDMY K G++     VF ++ E++ V++  MI
Sbjct: 405 RQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMI 464

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
           +GY Q+G    AL +FR M   G +PD +T + VLSACS+AGLV+EG + F  M+ E  +
Sbjct: 465 VGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGL 524

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  +H+ C+ D+LGR G + EA + ++ +  + + + +WGSLL +C++HG+ EL + VA
Sbjct: 525 APMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNV-VWGSLLAACKVHGNIELGKYVA 583

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           +KL+E+D  NS P  +VLLSN+YAE G W++V +VRK+MR+RG+ K+ GCSWI++   V+
Sbjct: 584 EKLMEIDPLNSGP--YVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVH 641

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F  KD+ HP    I+ +L+ L  +M+ AG
Sbjct: 642 VFMVKDKRHPLKKDIHLVLKFLTEQMKWAG 671



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 158/648 (24%), Positives = 292/648 (45%), Gaps = 114/648 (17%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV- 164
           D+  ++ +L +C  +++    + +H   I+   +   F+ N L++ Y  C    DA  V 
Sbjct: 18  DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77

Query: 165 ------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                        +  V   + K D    VF +M   +  +WN +VS + + +R+ EA+R
Sbjct: 78  DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
            F  M       +  SF +   A + L D      ++ L+ K  S Y+ D+++ S+ + M
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISK--SRYLLDVYMGSALVDM 195

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G    A++ FD    RN   WN++I  Y QN    +A+E+FV +++ + +  D++T
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMD-NGVEPDEIT 254

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKN-----------------------------FVAL 363
             S +SA +    +  G Q+HA ++K                              F  +
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 364 PV-----------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           P+                       ++ + ++E++VVSWN +I+ + QNG ++E + L  
Sbjct: 315 PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-------SYLID 453
            ++++       T   LL+A +NL +  +G+Q H  +L+HG  F+  E       + LID
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLID 434

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G+++    +FE+    +RD  +WNAMI GY QNG    A   FR+ML     P+ 
Sbjct: 435 MYMKCGMVEDGCLVFER--MVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDH 492

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+  VL AC+  G +E G+       RY       +G +                    
Sbjct: 493 VTMIGVLSACSHAGLVEEGR-------RYFHSMRTELGLA-------------------- 525

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            P K+   +T M+   G+ G  + A  L ++M    ++PD + + ++L+AC   G ++ G
Sbjct: 526 -PMKDH--FTCMVDLLGRAGCLDEANDLIQTMP---MQPDNVVWGSLLAACKVHGNIELG 579

Query: 634 LQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             + + + +   I P ++  Y  +++M   +G+  +     K++ + G
Sbjct: 580 KYVAEKLME---IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRG 624



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 237/557 (42%), Gaps = 113/557 (20%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +  + LS + + G+   A  +F S+  P    WN ++ GF  ++   EA+  +
Sbjct: 80  MPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFF 139

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M   S     + Y++ S L ACA   +L +G  +H    +       ++ ++L++MYS
Sbjct: 140 VDMH--SEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C     A+                  + FD M  RN+V+WN++++ Y +     +A+  
Sbjct: 198 KCGVVACAQ------------------RAFDGMAVRNIVSWNSLITCYEQNGPAGKALEV 239

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F MM+  G+ P  I+  +V  A +S    +    ++  +VK   +Y NDL + ++ + MY
Sbjct: 240 FVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKR-DKYRNDLVLGNALVDMY 298

Query: 274 AELGCFDFARKIFD-------------------------------NCLERNTEVWNTMIG 302
           A+    + AR +FD                               N +E+N   WN +I 
Sbjct: 299 AKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIA 358

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
           GY QN    EA+ LF+ +L+ + I     TF + L+A + L +L LG+Q H  I+K+   
Sbjct: 359 GYTQNGENEEAVRLFL-LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417

Query: 360 ---------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                    FV   +I              V   ++ERDVVSWN MI  + QNG     L
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNAL 477

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            +  +M   G   D VT+  +LSA S           HA L+  G        Y   M  
Sbjct: 478 EIFRKMLVSGQKPDHVTMIGVLSACS-----------HAGLVEEG------RRYFHSMRT 520

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + GL               +D  T   M+    + G L+EA    + M    + P+ V  
Sbjct: 521 ELGLAPM------------KDHFT--CMVDLLGRAGCLDEANDLIQTM---PMQPDNVVW 563

Query: 517 ASVLPACNPMGNIELGK 533
            S+L AC   GNIELGK
Sbjct: 564 GSLLAACKVHGNIELGK 580



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 205/459 (44%), Gaps = 41/459 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+L      L    + S L  +  + G    A++ FD +     V WN++I  +  N 
Sbjct: 172 QIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNG 231

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+ ++  M  +      D  T +SV+ ACA    +R G  +H   ++     +  V
Sbjct: 232 PAGKALEVFVMMMDNG--VEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV 289

Query: 145 Y-NSLLNMYSTCLSSLDAEMV----GLKYVEVDYSKYDLVCK------------VFDTMR 187
             N+L++MY+ C    +A +V     L+ V    S+  +VC             +F  M 
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRNV---VSETSMVCGYARAASVKAARLMFSNMM 346

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            +NVV+WN +++ Y +     EAVR F ++ R  I P+  +F N+  A ++L D K    
Sbjct: 347 EKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406

Query: 248 VYGLLVKLG----SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
            +  ++K G    S   +D+FV +S I MY + G  +    +F+  +ER+   WN MI G
Sbjct: 407 AHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVG 466

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
           Y QN +   A+E+F ++L   +   D VT +  LSA S    ++ G++    +       
Sbjct: 467 YAQNGYGTNALEIFRKMLVSGQKP-DHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLA 525

Query: 364 PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
           P+        +D   +  M+    + G  DE   L+  M  Q    D+V   +LL+A   
Sbjct: 526 PM--------KD--HFTCMVDLLGRAGCLDEANDLIQTMPMQP---DNVVWGSLLAACKV 572

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIK 462
             N ++GK     L+       G    L +MYA+ G  K
Sbjct: 573 HGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWK 611


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 204/661 (30%), Positives = 355/661 (53%), Gaps = 64/661 (9%)

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
           ++ +DYS      ++FD +   N   WNT++  Y+++    +A+  +++M++  + P   
Sbjct: 88  FIGLDYS-----LQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNY 142

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  V  A +          ++  ++K+G  + +D++V ++ I MYA  G    ARK+FD
Sbjct: 143 TYPLVVQACAVRLLEFGGKEIHDHVLKVG--FDSDVYVQNTLINMYAVCGNMRDARKLFD 200

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                ++  WN+++ GYV+     EA  +F Q+ + + +  + +  L             
Sbjct: 201 ESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLG----------K 250

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +GQ + A+ +           N + E+D+VSW+ +IS + QNG+ +E L++  EM   G 
Sbjct: 251 MGQVMEAWKL----------FNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGM 300

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQ 466
            +D V V ++LSA ++L     GK  H  ++R GI  +  +++ LI MY+ SG I  A++
Sbjct: 301 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQK 360

Query: 467 IFEKNDSGDRDQATWNAMIAG-------------------------------YTQNGLLE 495
           +F  N S + DQ +WN+MI+G                               Y Q+    
Sbjct: 361 LF--NGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFS 418

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           E    F +M    + P+   + SV+ AC  +  ++ GK +H +  +  L  NV +GT+L+
Sbjct: 419 ETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLL 478

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMY K G +  A  VF  + EK   ++  +I+G   +G+ ER+L +F  MK  G+ P+ I
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 538

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+ VL AC + GLVDEG   F  M +++ I+P+ +HY C+ D+LGR G + EA + ++ 
Sbjct: 539 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +    +V   WG+LLG+C+ HG +E+ E V +KL+E+   +   G+HVLLSNI+A +G+W
Sbjct: 599 MPMAPDV-ATWGALLGACKKHGDTEMGERVGRKLIELQPDHD--GFHVLLSNIFASKGDW 655

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           E+V +VR  M+++G+ K  GCS I+  G V+ F + D+ HP  +K+  ML  +A  ++  
Sbjct: 656 EDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKME 715

Query: 796 G 796
           G
Sbjct: 716 G 716



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 249/547 (45%), Gaps = 109/547 (19%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q+FD I      +WNT++  ++ +N   +A+LLY  M K++     DNYTY  V++ACA 
Sbjct: 96  QIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNN--VGPDNYTYPLVVQACA- 152

Query: 120 TRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA----------EMVGLKY 168
            R L   GK +H H ++   +   +V N+L+NMY+ C +  DA          + V    
Sbjct: 153 VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNS 212

Query: 169 VEVDYSKYDLVCK---VFDTMRRRNVVA-------------------------------W 194
           +   Y K   V +   +FD M +RN+VA                               W
Sbjct: 213 ILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSW 272

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           + ++S Y +   Y EA+  F  M   G+R   +  V+V  A + L   K+  +++GL+++
Sbjct: 273 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 332

Query: 255 LGSE-YVNDLFVASSAIFMYA-------------------------------ELGCFDFA 282
           +G E YVN   + ++ I MY+                               + G  + A
Sbjct: 333 MGIESYVN---LQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKA 389

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R +FD   E++   W+ +I GY Q++   E + LF + ++L +I  D+   +S +SA + 
Sbjct: 390 RALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE-MQLGQIRPDETILVSVISACTH 448

Query: 343 LQELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTM 382
           L  LD G+ +HAYI KN + + VI                    V N + E+ V SWN +
Sbjct: 449 LAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNAL 508

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHG 441
           I     NGL +  L +  EM+  G + + +T   +L A  ++   D G+   A ++ +HG
Sbjct: 509 IIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHG 568

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           I    ++ Y  ++D+  ++GL+  A ++ E       D ATW A++    ++G  E    
Sbjct: 569 IE-PNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAP-DVATWGALLGACKKHGDTEMGER 626

Query: 500 AFRQMLE 506
             R+++E
Sbjct: 627 VGRKLIE 633



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/439 (22%), Positives = 195/439 (44%), Gaps = 31/439 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+       S +  + + G+   A +LF+ +     V W+ +I G+  N +  EA++++
Sbjct: 233 MPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMF 292

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M  +      D     SVL ACA    ++ GK +H   IR        + N+L++MYS
Sbjct: 293 IEMNANG--MRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS 350

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYD------LVC-------KVFDTMRRRNVVAWNTIVSW 200
                +DA+ +      +D   ++      + C        +FD M  +++V+W+ ++S 
Sbjct: 351 GSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISG 410

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           Y + + + E +  F  M    IRP     V+V  A + L        V+  + K G +  
Sbjct: 411 YAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKV- 469

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            ++ + ++ + MY + GC + A ++F+   E+    WN +I G   N     ++++F + 
Sbjct: 470 -NVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSE- 527

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
           ++ + ++ +++TF+  L A   +  +D G+   A +I+             IE +V  + 
Sbjct: 528 MKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKH----------GIEPNVKHYG 577

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            M+    + GL +E   L+  M       D  T  ALL A     + ++G++    L+  
Sbjct: 578 CMVDLLGRAGLLNEAEKLIESMP---MAPDVATWGALLGACKKHGDTEMGERVGRKLIEL 634

Query: 441 GIHFEGMESYLIDMYAKSG 459
               +G    L +++A  G
Sbjct: 635 QPDHDGFHVLLSNIFASKG 653


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 207/598 (34%), Positives = 325/598 (54%), Gaps = 67/598 (11%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           +++  +S +    +LG  D A  +F +  ER+   WN+M+ G+ Q++   EA+  F  ++
Sbjct: 85  NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA-MM 143

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
             +  V ++ +F S LSA S L +++ G Q+H+ I K+     V + +A++         
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      +R+VVSWN++I+ F QNG   E L +   M +     D VT+ +++SA 
Sbjct: 204 NDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263

Query: 422 SNLRNQDVGKQTHAYL-----LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK------ 470
           ++L    VG++ H  +     LR+ I    + +  +DMYAK   IK AR IF+       
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDII---LSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320

Query: 471 -----------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                                      +R+  +WNA+IAGYTQNG  EEA   F  +   
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQL------HGFSIRYLLDQNVFVGTSLIDMYSKS 561
           +V P   + A++L AC  +  + LG Q       HGF  +   + ++FVG SLIDMY K 
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +     VF K+ E++ V++  MI+G+ Q+G    AL LFR M   G +PD IT + VL
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SAC +AG V+EG   F  M +++ + P  +HY C+ D+LGR G + EA   ++E+  + +
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + IWGSLL +C++H +  L + VA+KLLE++  NS P  +VLLSN+YAE G WE+V  V
Sbjct: 561 SV-IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP--YVLLSNMYAELGKWEDVMNV 617

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
           RK MR+ G+ K+ GCSWI + G+ + F  KD+ HP+  +I+ +L+ L  EMR   + T
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHT 675



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 170/667 (25%), Positives = 296/667 (44%), Gaps = 151/667 (22%)

Query: 106 DNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           D+  ++ +L +C +++   I  + VH   I+   +   F+ N L++ YS C S  D    
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR-- 75

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV-------------------------S 199
                           +VFD M +RN+  WN++V                         +
Sbjct: 76  ----------------QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119

Query: 200 W------YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W      + + +R  EA+  F MM + G   +  SF +V  A S L D      V+ L+ 
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K  S +++D+++ S+ + MY++ G  + A+++FD   +RN   WN++I  + QN   VEA
Sbjct: 180 K--SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------------- 359
           +++F  +LE   +  D+VT  S +SA + L  + +GQ++H  ++KN              
Sbjct: 238 LDVFQMMLE-SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296

Query: 360 ---------------FVALPV-----------------------IVLNAVIERDVVSWNT 381
                          F ++P+                       ++   + ER+VVSWN 
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+ + QNG ++E L L   ++++       +   +L A ++L    +G Q H ++L+HG
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416

Query: 442 IHFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
             F+  E       + LIDMY K G ++    +F K    +RD  +WNAMI G+ QNG  
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYG 474

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            EA   FR+MLE    P+ +T+  VL AC   G +E G+  H FS               
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFS--------------- 517

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
             M    GV           P ++   YT M+   G+ G  E A S+   M    ++PD+
Sbjct: 518 -SMTRDFGV----------APLRDH--YTCMVDLLGRAGFLEEAKSMIEEMP---MQPDS 561

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-YCCVADMLGRVGKVVEAYEFV 673
           + + ++L+AC     +  G  +    ++  +++PS    Y  +++M   +GK  +     
Sbjct: 562 VIWGSLLAACKVHRNITLGKYV---AEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618

Query: 674 KELGEEG 680
           K + +EG
Sbjct: 619 KSMRKEG 625



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 239/558 (42%), Gaps = 115/558 (20%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+    T  S ++ + + G    A  LF S+       WN+++ GF  ++   EA+  +
Sbjct: 81  MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           + M K       + Y+++SVL AC+   ++  G  VH    +       ++ ++L++MYS
Sbjct: 141 AMMHKEGFVL--NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C +  DA+                  +VFD M  RNVV+WN++++ + +    VEA+  
Sbjct: 199 KCGNVNDAQ------------------RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F+MML   + P  ++  +V  A +SL   K    V+G +VK   +  ND+ ++++ + MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK-NDKLRNDIILSNAFVDMY 299

Query: 274 AELGCFDFARKIFDN-------------------------------CLERNTEVWNTMIG 302
           A+      AR IFD+                                 ERN   WN +I 
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
           GY QN    EA+ LF  +L+ + +     +F + L A + L EL LG Q H +++K+   
Sbjct: 360 GYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418

Query: 360 ---------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                    FV   +I              V   ++ERD VSWN MI  F QNG  +E L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L  EM + G   D +T+  +LSA             HA  +  G H      Y   M  
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACG-----------HAGFVEEGRH------YFSSMTR 521

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVT 515
             G+               RD  T   M+    + G LEEA    + M+E   + P+ V 
Sbjct: 522 DFGVAPL------------RDHYT--CMVDLLGRAGFLEEA----KSMIEEMPMQPDSVI 563

Query: 516 IASVLPACNPMGNIELGK 533
             S+L AC    NI LGK
Sbjct: 564 WGSLLAACKVHRNITLGK 581



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 212/455 (46%), Gaps = 39/455 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+HSL    P L    I S L  +  + G  + A+++FD +     V WN++I  F  N 
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-- 142
              EA+ ++  M +S      D  T +SV+ ACA    +++G+ VH   ++  ++  R  
Sbjct: 233 PAVEALDVFQMMLESR--VEPDEVTLASVISACASLSAIKVGQEVHGRVVK--NDKLRND 288

Query: 143 -FVYNSLLNMYSTCLSSLDAEMV----GLKYVEVD---YSKYDLVCK------VFDTMRR 188
             + N+ ++MY+ C    +A  +     ++ V  +    S Y +         +F  M  
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           RNVV+WN +++ Y +     EA+  F ++ R  + P+  SF N+  A + L +       
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408

Query: 249 YGLLVKLGSEYV----NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           +  ++K G ++     +D+FV +S I MY + GC +    +F   +ER+   WN MI G+
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN +  EA+ELF ++LE  E   D +T +  LSA      ++ G+   + + ++F   P
Sbjct: 469 AQNGYGNEALELFREMLESGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
           +        RD   +  M+    + G  +E   ++ EM  Q    DSV   +LL+A    
Sbjct: 528 L--------RD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQP---DSVIWGSLLAACKVH 574

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           RN  +GK     LL       G    L +MYA+ G
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 205/610 (33%), Positives = 328/610 (53%), Gaps = 44/610 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           +VFD M  RN  AWN ++   V   R+ EA+R +  M+R G +     ++  V  A ++L
Sbjct: 115 RVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAAL 174

Query: 240 GDYKSA---------DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           G+ +           D+  G+          ++FV  + + M+A+ GC   AR +F++  
Sbjct: 175 GEVEQGRKVQENVETDIARGIAK-------GNVFVQCALVDMFAKCGCLGEARNMFESMG 227

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   W  MIGG V+    +E + L ++ ++ +    D + F + + A  +++EL  G 
Sbjct: 228 VRDLASWTAMIGGAVRGGDWLEVMTL-LKRMKSEGFRPDSMIFATVIPACGKVKELRTGM 286

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            LH Y +K  V   + V NA+++                    +DV SW+T+I+   QN 
Sbjct: 287 ALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNR 346

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMES 449
           + +  + L  EM   G   +S T+ ++L + S LR    GK+ H + LR+ + H E + S
Sbjct: 347 IYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLAS 406

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID Y + G I+ A+ +FE     D      N+MI GY  N   E A    R +L+  +
Sbjct: 407 ALIDFYCRQGYIRDAQIVFEFKPKND--LVVLNSMIRGYVVNKDSESALRLLRALLKEGL 464

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ VT+ SVLP CN    +  GK+LH ++IR+ +     V  +L DMY K G +  A  
Sbjct: 465 RPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANK 524

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F  + E+N+VTY T+I   G+HG +++A  LF  MK  G+ PD +TFVA+LS CS+ GL
Sbjct: 525 IFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGL 584

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           +D+GL  +D M ++Y I P  EHY C+ D+  R GK+ +A+ F+  L +E   +++ G L
Sbjct: 585 IDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANL-QEVPEIDVLGCL 643

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L +CR H   ++AE+VA+++ E +  +  PGYH+LLSN+YA  G W  V ++R  + ER 
Sbjct: 644 LSACRDHHRMDIAELVAERIFEQNPND--PGYHILLSNVYASAGMWSEVTRIRTMIEERS 701

Query: 750 LRKEVGCSWI 759
           L+K  G S I
Sbjct: 702 LKKRTGNSLI 711



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 256/545 (46%), Gaps = 50/545 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +    +  WN +I G V      EA+  Y  M +     + D +TY  VLKAC
Sbjct: 113 AVRVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVA-DRFTYPPVLKAC 171

Query: 118 AETRNLRIGKAVH----CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A    +  G+ V         R  +  + FV  +L++M++ C    +A            
Sbjct: 172 AALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEAR----------- 220

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   +F++M  R++ +W  ++   V+   ++E +   + M   G RP ++ F  V 
Sbjct: 221 -------NMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVI 273

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           PA   + + ++   ++G  VK G    +D+ V ++ + MY +    D A  +F +   ++
Sbjct: 274 PACGKVKELRTGMALHGYAVKCGVG--DDICVPNALVDMYCKCARLDMAASLFWSIDHKD 331

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+T+I G+ QN     ++ LF +++    I  +  T  S L ++S+L+ L  G+++H
Sbjct: 332 VFSWSTIIAGHSQNRIYNVSVSLFTEMVA-SGIKPNSTTIASILPSISELRLLRYGKEIH 390

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            + ++N +     + +A+I+                     D+V  N+MI  +V N   +
Sbjct: 391 CFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSE 450

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLI 452
             L L+  + K+G   D VTV ++L   +       GK+ HAY +RH I     + + L 
Sbjct: 451 SALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALT 510

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G ++ A +IF      +R+  T+N +I+   ++G  ++AF+ F  M    V+P+
Sbjct: 511 DMYCKCGCLEIANKIFLLMT--ERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPD 568

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  ++L  C+  G I+ G   +   +R Y +  +    + ++D+YS+SG ++ A +  
Sbjct: 569 KVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFI 628

Query: 572 AKIPE 576
           A + E
Sbjct: 629 ANLQE 633



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 232/499 (46%), Gaps = 40/499 (8%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL--GCFDFARKIFDNCLE 291
           PAL+ +    +A +V G        Y     +A+  +  YA +  G    A ++FD    
Sbjct: 71  PALTEVRRLHAALLVRG--------YHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPT 122

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN+  WN +I G V      EA+  +  ++    +V D  T+   L A + L E++ G++
Sbjct: 123 RNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRK 182

Query: 352 LH----AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
           +       I +      V V  A+++                    RD+ SW  MI   V
Sbjct: 183 VQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAV 242

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           + G   E + L+  M+ +GF  DS+    ++ A   ++    G   H Y ++ G+  +  
Sbjct: 243 RGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDIC 302

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L+DMY K   +  A  +F   D   +D  +W+ +IAG++QN +   +   F +M+ 
Sbjct: 303 VPNALVDMYCKCARLDMAASLFWSIDH--KDVFSWSTIIAGHSQNRIYNVSVSLFTEMVA 360

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN  TIAS+LP+ + +  +  GK++H FS+R  L+ + F+ ++LID Y + G I  
Sbjct: 361 SGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRD 420

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF   P+ + V   +MI GY  +  SE AL L R++   G+ PD +T V+VL  C+ 
Sbjct: 421 AQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQ 480

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
              + +G ++     + + I         + DM  + G +  A +    + E   V   +
Sbjct: 481 PSRLLQGKELHAYAIR-HNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTV--TY 537

Query: 687 GSLLGSCRLHGHSELAEVV 705
            +L+ S   HGH++ A ++
Sbjct: 538 NTLISSLGKHGHADQAFIL 556



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 30/196 (15%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C++G    A+ +F+   +   V+ N++I G+V N     A+ L   + K       D+ T
Sbjct: 413 CRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRP--DHVT 470

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIR-----CFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
             SVL  C +   L  GK +H + IR     CFS     V N+L +MY  C         
Sbjct: 471 VVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFS-----VTNALTDMYCKC--------- 516

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                       ++  K+F  M  RN V +NT++S   K     +A   F +M R G+ P
Sbjct: 517 ---------GCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSP 567

Query: 225 STISFVNVFPALSSLG 240
             ++FV +    S  G
Sbjct: 568 DKVTFVALLSCCSHGG 583


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 206/639 (32%), Positives = 345/639 (53%), Gaps = 30/639 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD   ++ +   N ++  + + ++  EA+  F  + R G      S   V      L 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+   +K G  +V D+ V +S + MY +    +   ++FD    +N   W ++
Sbjct: 107 DRIVGKQVHCQCIKCG--FVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY QN    +A++LF Q ++L+ I  +  TF + L  ++    ++ G Q+H  +IK+ 
Sbjct: 165 LAGYRQNGLNEQALKLFSQ-MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   + V N+++                     R+ VSWN+MI+ FV NGLD E   L Y
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
            M+ +G  +       ++   +N++     KQ H  ++++G  F+  +++ L+  Y+K  
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIAS 518
            I  A ++F     G ++  +W A+I+GY QNG  + A   F QM  E  V PN  T +S
Sbjct: 344 EIDDAFKLFCMM-HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSS 402

Query: 519 VLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           VL AC  P  ++E GKQ H  SI+      + V ++L+ MY+K G I  A  VF +  ++
Sbjct: 403 VLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR 462

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + V++ +MI GY QHG  +++L +F  M+   +E D ITF+ V+SAC++AGLV+EG + F
Sbjct: 463 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           DLM ++Y I P+ EHY C+ D+  R G + +A + + ++        IW +LL +CR+H 
Sbjct: 523 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGA-TIWRTLLAACRVHL 581

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           + +L E+ A+KL+ +  ++S    +VLLSNIYA  GNW+   KVRK M  + ++KE G S
Sbjct: 582 NVQLGELAAEKLISLQPQDSAA--YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 639

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           WI+V      F + D  HPQS +IY  LE L++ +++AG
Sbjct: 640 WIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAG 678



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 275/543 (50%), Gaps = 50/543 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ++QLFD   +      N ++  F  N+   EA+ L+  +++S   T  D  + S VLK C
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT--DGSSLSCVLKVC 102

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +  +GK VHC  I+C       V  SL++MY    S  D E               
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGE--------------- 147

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD MR +NVV+W ++++ Y +     +A++ F  M   GI+P+  +F  V   L+
Sbjct: 148 ---RVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLA 204

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           + G  +    V+ +++K G +  + +FV +S + MY++      A+ +FD+   RN   W
Sbjct: 205 ADGAVEKGVQVHTMVIKSGLD--STIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSW 262

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+MI G+V N   +EA ELF + + L+ +      F + +   + ++E+   +QLH  +I
Sbjct: 263 NSMIAGFVTNGLDLEAFELFYR-MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVI 321

Query: 358 KNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           KN     + +  A++                      ++VVSW  +IS +VQNG  D  +
Sbjct: 322 KNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAM 381

Query: 397 MLVYEMQK-QGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLID 453
            L  +M++ +G   +  T +++L+A A+   + + GKQ H+  ++ G  +   + S L+ 
Sbjct: 382 NLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVT 441

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G I++A ++F++    DRD  +WN+MI+GY Q+G  +++   F +M   N+  + 
Sbjct: 442 MYAKRGNIESANEVFKRQV--DRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG 499

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           +T   V+ AC   G +  G++     ++ Y +   +   + ++D+YS++G++  A ++  
Sbjct: 500 ITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 559

Query: 573 KIP 575
           K+P
Sbjct: 560 KMP 562


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 230/756 (30%), Positives = 374/756 (49%), Gaps = 147/756 (19%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ +L+     ++   G++VHC  I+   +   ++ N+L+  Y        A+   L++ 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFY--------AKTGSLRFA 64

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV--------------------- 208
                       VFD M  ++  +WNT++S Y K   +                      
Sbjct: 65  H----------HVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAII 114

Query: 209 ----------EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV---VYGLLVKL 255
                      A+  F  M+   + PS  +  NV   LSS    ++ D+   ++  +VKL
Sbjct: 115 VGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV---LSSCAANQTLDIGRKIHSFVVKL 171

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G    + + VA+S + MYA+ G    A+ +FD    +N   WN +I  Y+Q+        
Sbjct: 172 G--LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQ------ 223

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERD 375
                 EL               A SQ +++                          +RD
Sbjct: 224 -----FEL---------------AASQFEKMP-------------------------DRD 238

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           +VSWN+MIS + Q G + E L +  +M  +     D+ T+ ++LSA +NL   ++GKQ H
Sbjct: 239 IVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIH 298

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSG------------------- 474
           AY+LR      G + + LI MYAKSG ++ AR I E N +                    
Sbjct: 299 AYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGN 358

Query: 475 ------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                       DRD   W AMI GY QNGL  +A   FR M+     PN  T+A++L  
Sbjct: 359 VKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSV 418

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP--EKNSV 580
            + +  +E GKQ+H  +I+        V  +LI MY+K+G IN A  VF  +P  +K  V
Sbjct: 419 SSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIV 477

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++T+MI+   QHG+ + A++LF  M   G++PD IT+V VLSAC++ GLV++G + +++M
Sbjct: 478 SWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMM 537

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            + ++I+P+  HY C+ D+ GR G + EAY F++ +  E + +  WGSLL SC++H +++
Sbjct: 538 TEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIA-WGSLLASCKIHKNAD 596

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           LA+V A++LL +D  NS  G ++ L+N+Y+  G WEN  + RK M++RG+RKE G SWI 
Sbjct: 597 LAKVAAERLLLIDPGNS--GAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIH 654

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   V+ F  +D  HPQ  +IY+++  +  E++  G
Sbjct: 655 IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMG 690



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 139/583 (23%), Positives = 256/583 (43%), Gaps = 84/583 (14%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY 87
           H +   +P   T +  + +S   ++G   ++R+L   +     V W  II+G+    L  
Sbjct: 65  HHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFD 124

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            AI ++++M   S       +T S+VL +CA  + L IG+ +H   ++        V  S
Sbjct: 125 NAIWMFAKM--ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATS 182

Query: 148 LLNMYSTCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           LLNMY+ C   + A++V              L  + +   +++L    F+ M  R++V+W
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           N+++S Y +    +EA+  F  ML    ++P   +  ++  A ++L        ++  ++
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302

Query: 254 KLGSEYVN-------------------------------DLFVASSAIFMYAELGCFDFA 282
           +  +E                                  ++   +S +  Y +LG    A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF-VQVLELDEIVFDDVTFLSALSAVS 341
           R+IF+   +R+   W  MI GYVQN    +A+ELF + V E  E   +  T  + LS  S
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEP--NSYTLAAMLSVSS 420

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWN 380
            L  L+ G+Q+HA  IK   +    V NA+I                     ++++VSW 
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR- 439
           +MI A  Q+GL  E + L   M   G   D +T   +LSA +++   + G++ +  +   
Sbjct: 481 SMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEV 540

Query: 440 HGI-----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           H I     H+  M    ID+Y ++GL++ A  +F ++   + D   W +++A    +   
Sbjct: 541 HEIEPTLSHYACM----IDLYGRAGLLQEA-YLFIESMPIEPDNIAWGSLLASCKIHKNA 595

Query: 495 EEAFVAFRQML--EHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           + A VA  ++L  +   +   + +A+V  AC    N    ++L
Sbjct: 596 DLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKL 638



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 210/455 (46%), Gaps = 34/455 (7%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   Q G+  LA   F+ +     V WN++I G+       EA+ ++S+M  + 
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKML-NE 268

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC----L 156
           P    DN+T +S+L ACA    L IGK +H + +R  +  S  V N+L++MY+      +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 157 SSLDAE--------MVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTE 205
           + L  E        ++    +   Y+K   V    ++F+ +R R+VVAW  ++  YV+  
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            + +A+  FR+M+  G  P++ +   +    SSL   +    ++   +K G        V
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS--V 446

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELD 324
            ++ I MYA+ G  + A+++FD    +   V W +MI    Q+    EAI LF ++L + 
Sbjct: 447 TNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVG 506

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
            +  D +T++  LSA + +  ++ G++ +  + +             IE  +  +  MI 
Sbjct: 507 -MKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH----------EIEPTLSHYACMID 555

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + + GL  E  + +  M  +    D++   +LL++    +N D+ K     LL      
Sbjct: 556 LYGRAGLLQEAYLFIESMPIEP---DNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGN 612

Query: 445 EGMESYLIDMYAKSGLIKTARQIFE-KNDSGDRDQ 478
            G    L ++Y+  G  + A Q  +   D G R +
Sbjct: 613 SGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 250/812 (30%), Positives = 410/812 (50%), Gaps = 73/812 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+H L          T+ + L  +   C  G P  A+Q+FD+      + WN ++  +  
Sbjct: 183 QVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAK 242

Query: 83  NNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACA-ETRNLRIGKAVHCHFIRCFSN 139
                    L+  M    S+     + +T+ S++ A +  + +  +   V    ++  S+
Sbjct: 243 KGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSS 302

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +V ++L++ ++             ++  +D +K      +F  ++ RN V  N ++ 
Sbjct: 303 SDLYVGSALVSAFA-------------RHGMLDEAK-----DIFINLKERNAVTLNGLIV 344

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL-SSLGDYK-------SADVVYGL 251
             VK     EAV  F     MG R S +   + F  L S++ ++            V+G 
Sbjct: 345 GLVKQHCSEEAVGIF-----MGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGH 399

Query: 252 LVKLGSEYVNDLFVASS--AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           +++ G   + DL +A S   + MYA+ G  D A ++F     R+   WNT+I    QN  
Sbjct: 400 ILRTG---LIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGF 456

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             E   +   ++    I   +   +S LS+ + L+ L  GQQ+H   +K  + L   V N
Sbjct: 457 -CEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSN 515

Query: 370 AVI--------------------ERDVVSWNTMISAFVQ-NGLDDEGLMLVYEMQKQGFM 408
           A++                    E D+VSWN+++   V  +    E + +   M + G  
Sbjct: 516 ALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLT 575

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQI 467
            + VT   LLSA S L   ++GKQ HA +L+HG I    +++ L+  YAKSG + +  Q+
Sbjct: 576 PNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQL 635

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F    SG RD  +WN+MI+GY  NG L+E       M+  N   +  T + VL AC  + 
Sbjct: 636 FSSM-SGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVA 694

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            +E G ++H F IR  L+ +V V ++L+DMYSK G I+YA+ VF  + +KN  ++ +MI 
Sbjct: 695 ALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMIS 754

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GY +HG+ E+AL +F  M+  G  PD +TFV+VLSACS+AGLVD GL  F++M +++ I 
Sbjct: 755 GYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMM-EDHGIL 813

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS---ELAEV 704
           P  EHY CV D+LGR GK+++  E++  +  + N L IW ++L +CR        +L + 
Sbjct: 814 PHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTL-IWRTVLVACRQSKDGDRIDLGKE 872

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            ++ LLE++ +N  P  +VL SN YA  G WE+  K R  M    ++KE G SW+ +G  
Sbjct: 873 ASRMLLELEPQN--PVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDG 930

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V+ F + D+ HP + +IYE L  L  +++NAG
Sbjct: 931 VHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAG 962



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 202/782 (25%), Positives = 356/782 (45%), Gaps = 96/782 (12%)

Query: 10  LPPP--PPTATPPPPQ------LPQIHSLSPPIPKLKTPTIRSRLSK-----------IC 50
           LPPP  PP+ +PPP        LP+    + P  +L    ++  L+              
Sbjct: 44  LPPPQTPPSRSPPPVHPHAGLLLPRRGEEAAP-ERLHLELVKRGLTHDLFLSNHLVNLYA 102

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYT 109
           +  R   ARQ+FD +     V W  ++ G+V + +  EA  ++  M  + S ++    +T
Sbjct: 103 KGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFT 162

Query: 110 YSSVLKACAETRNLRIGKAVHCHFI--RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + SVL+AC +     +  AV  H +  +     +  V N+L++MY  C        VGL 
Sbjct: 163 FGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNC-------SVGLP 215

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR----MGIR 223
                        +VFDT   R+++ WN ++S Y K    V     F  ML     + +R
Sbjct: 216 LQAQ---------QVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELR 266

Query: 224 PSTISFVNVFPALSSLGDYKSA--DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           P+  +F ++  A +SL    S   D V+  ++K GS   +DL+V S+ +  +A  G  D 
Sbjct: 267 PNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSS--SDLYVGSALVSAFARHGMLDE 323

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A+ IF N  ERN    N +I G V+ +   EA+ +F+     D  V +  TF+  LSAV+
Sbjct: 324 AKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT--RDSFVVNTDTFVVLLSAVA 381

Query: 342 QL----QELDLGQQLHAYIIKN-FVALPVIVLNAVIE--------------------RDV 376
           +       L  G+++H +I++   + L + + N ++                     RD 
Sbjct: 382 EFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDR 441

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS-VTVTALLSAASNLRNQDVGKQTHA 435
           VSWNT+IS   QNG   EG M+ Y M +QG +  S     + LS+ ++LR    G+Q H 
Sbjct: 442 VSWNTIISVLDQNGF-CEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHC 500

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA-GYTQNGL 493
             ++ G+  +  + + L+ MY   G    + +IF  N   + D  +WN+++    + +  
Sbjct: 501 DAVKWGLDLDTSVSNALVKMYGDCGARSESWEIF--NSMAEHDIVSWNSIMGVMVSSHAP 558

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             E+   F  M+   +TPN VT  ++L A +P+  +ELGKQ+H   +++   ++  V  +
Sbjct: 559 TAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNA 618

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           L+  Y+KSG ++    +F+ +   +++V++ +MI GY  +G  +  +     M       
Sbjct: 619 LMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQML 678

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVE 668
           D  TF  VL+AC+    ++ G+++       + I+   E    V     DM  + G++  
Sbjct: 679 DCCTFSIVLNACASVAALERGMEM-----HAFGIRSQLESDVVVESALLDMYSKCGRIDY 733

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A +    + ++      W S++     HG   L E   +   EM    + P +   +S +
Sbjct: 734 ASKVFNSMSQKNEF--SWNSMISGYARHG---LGEKALEIFEEMQRNGACPDHVTFVSVL 788

Query: 729 YA 730
            A
Sbjct: 789 SA 790



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ--------LHGFSIRYLLDQNVFVGTSLI 555
           +L H + P     +   P  +P   + L ++        LH   ++  L  ++F+   L+
Sbjct: 39  LLAHRLPPPQTPPSRSPPPVHPHAGLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLV 98

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE---P 612
           ++Y+K   +  A  VF  + E+N+V++T ++ GY   G+++ A  +F++M   G E   P
Sbjct: 99  NLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRP 158

Query: 613 DAITFVAVLSACSYAG--LVDEGLQIFDLMQQ 642
              TF +VL AC  AG  L+   +Q+  L+ +
Sbjct: 159 TPFTFGSVLRACQDAGPDLLAFAVQVHGLVSK 190


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 226/760 (29%), Positives = 392/760 (51%), Gaps = 49/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD+++    V W++++  +  ++   EA++L+ Q  +S      + Y  +SV++AC
Sbjct: 93  ANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKP-NEYILASVVRAC 151

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +   L     +H   ++       +V  SL++ Y+             K+  +D ++  
Sbjct: 152 TQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYT-------------KHACIDDARL- 197

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD ++ +    W TI++ Y K  R   +++ F  M    + P      +V  A  
Sbjct: 198 ----LFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACL 253

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    ++  +++ G   V D+ + +  I  Y +       RK+FD  +++N   W
Sbjct: 254 MLKFLEGGKQIHCYVLRSG--IVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSW 311

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            T+I G +QN+   +A++LFV++  +     D     S L++   L  L+ G+Q+HAY I
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNP-DAFGCTSVLNSCGSLVALEKGRQVHAYAI 370

Query: 358 K------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K      +FV   +I              V N +   D+VS+N MI  + +     E L 
Sbjct: 371 KVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALD 430

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYA 456
           L  EM+        +   +LL  +++L + ++  Q H  ++++G+   E   S LID+Y+
Sbjct: 431 LFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYS 490

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   +  AR +FE  +  D+D   W AM +GYTQ    EE+   ++ +    + PN  T 
Sbjct: 491 KCSRVGDARLVFE--EIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTF 548

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A+V+ A + + ++  G+Q H   I+   D + FV  +L+DMY+KSG I  A   F     
Sbjct: 549 AAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNW 608

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K++  + +MI  Y QHG +E+AL +F  M   G++P+ +TFV VLSACS+ GL+D G   
Sbjct: 609 KDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDH 668

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           FD M Q + I+P  EHY C+  +LGR GK+ EA EF++++  +   + +W SLL +CR+ 
Sbjct: 669 FDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAV-VWRSLLSACRVS 726

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+ EL    A+  +  +  +S  G +VLLSNI+A +G W NV ++R++M   G+ KE GC
Sbjct: 727 GNVELGTYAAEMAISCNPADS--GSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGC 784

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V   +++F +KD  H  S  I  +L+ L ++++  G
Sbjct: 785 SWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFG 824



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 194/409 (47%), Gaps = 30/409 (7%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P +       S  VV+G        + +D+F+ ++ +  Y++L   + A K+FD    +N
Sbjct: 52  PHIPCCKKIHSKIVVFGF-------HKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKN 104

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W++M+  Y  ++H +EA+ LFVQ +       ++    S + A +Q   L+   Q+H
Sbjct: 105 LVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIH 164

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
             ++K      V V  ++I+                    +   +W T+I+ + + G   
Sbjct: 165 GLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQ 224

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
             L L  +M++     D   ++++LSA   L+  + GKQ H Y+LR GI  +  M +  I
Sbjct: 225 VSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFI 284

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D Y K   ++  R++F++    D++  +W  +IAG  QN    +A   F +M      P+
Sbjct: 285 DFYFKCHKVQLGRKLFDR--MVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPD 342

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
                SVL +C  +  +E G+Q+H ++I+  +D + FV   LIDMY+K   +  A  VF 
Sbjct: 343 AFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFN 402

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
            +   + V+Y  MI GY +      AL LFR M+     P  + FV++L
Sbjct: 403 LMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 237/531 (44%), Gaps = 90/531 (16%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           +  L R+LFD +     V W T+I G + N+   +A+ L+ +M +     + D +  +SV
Sbjct: 292 KVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMG--WNPDAFGCTSV 349

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L +C     L  G+ VH + I+   +   FV N L++MY+ C S  DA            
Sbjct: 350 LNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDAR----------- 398

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVF+ M   ++V++N ++  Y + ++  EA+  FR M      P+ + FV++ 
Sbjct: 399 -------KVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLL 451

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +SL   + ++ ++GL++K G     D F  S+ I +Y++      AR +F+   +++
Sbjct: 452 GVSASLYHLELSNQIHGLIIKYGVSL--DEFAGSALIDVYSKCSRVGDARLVFEEIQDKD 509

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
             VW  M  GY Q +   E+++L+ + L++  +  ++ TF + ++A S +  L  GQQ H
Sbjct: 510 IVVWTAMFSGYTQQSENEESLKLY-KCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFH 568

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
             +IK        V N +++                    +D   WN+MI+ + Q+G  +
Sbjct: 569 NQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAE 628

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--L 451
           + L +  +M  +G   + VT   +LSA S+    D+G      + + GI   G+E Y  +
Sbjct: 629 KALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIE-PGIEHYVCM 687

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +  ++G +  A++  EK                       +++A V +R         
Sbjct: 688 VSLLGRAGKLYEAKEFIEKMP---------------------IKQAAVVWR--------- 717

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSI--------RYLLDQNVFVGTSL 554
                 S+L AC   GN+ELG      +I         Y+L  N+F    +
Sbjct: 718 ------SLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGM 762


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 192/572 (33%), Positives = 322/572 (56%), Gaps = 32/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  L+ LG ++    F+ +  I   +  G   FAR++FD+        WN +I GY +N
Sbjct: 40  IHARLLVLGLQFSG--FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           NH  +A+ ++   ++L  +  D  TF   L A S L  L +G+ +HA + +      V V
Sbjct: 98  NHFQDALLMYSN-MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 368 LNAVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            N +I                      ER +VSW  ++SA+ QNG   E L +   M+K 
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
               D V + ++L+A + L++   G+  HA +++ G+  E  +   L  MYAK G + TA
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           + +F+K  S +     WNAMI+GY +NG   EA   F +M+  +V P+ ++I S + AC 
Sbjct: 277 KILFDKMKSPN--LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G++E  + ++ +  R     +VF+ ++LIDM++K G +  A  VF +  +++ V ++ 
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI+GYG HG +  A+SL+R+M+  G+ P+ +TF+ +L AC+++G+V EG   F+LM  ++
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLM-ADH 453

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           KI P  +HY CV D+LGR G + +AYE +K +  +  V  +WG+LL +C+ H H EL E 
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV-TVWGALLSACKKHRHVELGEY 512

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A++L  +D  N+  G++V LSN+YA    W+ V +VR  M+E+GL K+VGCSW++V G 
Sbjct: 513 AAQQLFSIDPSNT--GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +  F   D+ HP+  +I   +E +   ++  G
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 252/548 (45%), Gaps = 89/548 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
            ARQ+FD + RP    WN II G+  NN   +A+L+YS M+ +    S D++T+  +LKA
Sbjct: 71  FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKA 128

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSLDAEMVGLKYVEVDYS 174
           C+   +L++G+ VH    R   +   FV N L+ +Y+ C  L S      GL   E    
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE---- 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                         R +V+W  IVS Y +    +EA+  F  M +M ++P  ++ V+V  
Sbjct: 185 --------------RTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLN 230

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L D K    ++  +VK+G E   DL ++ +   MYA+ G    A+ +FD     N 
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT--MYAKCGQVATAKILFDKMKSPNL 288

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +WN MI GY +N +  EAI++F +++  D +  D ++  SA+SA +Q+  L+  + ++ 
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347

Query: 355 YIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y+ ++      F++  +I              V +  ++RDVV W+ MI  +  +G   E
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            + L   M++ G   + VT   LL A +           H+ ++R G  F        ++
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGWWF-------FNL 449

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
            A   +              +  Q  +  +I    + G L++A+   + M    V P V 
Sbjct: 450 MADHKI--------------NPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGVT 492

Query: 515 TIASVLPACNPMGNIELG----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
              ++L AC    ++ELG    +QL  FSI      N      L ++Y+ + + +  A V
Sbjct: 493 VWGALLSACKKHRHVELGEYAAQQL--FSID---PSNTGHYVQLSNLYAAARLWDRVAEV 547

Query: 571 FAKIPEKN 578
             ++ EK 
Sbjct: 548 RVRMKEKG 555



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 24/313 (7%)

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
           +IDS T  A L            KQ HA LL  G+ F G + + LI   +  G I  ARQ
Sbjct: 27  LIDSATHKAQL------------KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74

Query: 467 IFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           +F   D   R Q   WNA+I GY++N   ++A + +  M    V+P+  T   +L AC+ 
Sbjct: 75  VF---DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK--IPEKNSVTYT 583
           + ++++G+ +H    R   D +VFV   LI +Y+K   +  A  VF    +PE+  V++T
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQ 642
            ++  Y Q+G    AL +F  M+   ++PD +  V+VL+A +    + +G  I   +++ 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +I+P       +  M  + G+V  A     ++     +L  W +++     +G++  A
Sbjct: 252 GLEIEPDL--LISLNTMYAKCGQVATAKILFDKMKSPNLIL--WNAMISGYAKNGYAREA 307

Query: 703 EVVAKKLLEMDTR 715
             +  +++  D R
Sbjct: 308 IDMFHEMINKDVR 320



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
           G+   A+ LFD +  P  ++WN +I G+  N    EAI ++ +M  K   P    D  + 
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP----DTISI 326

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +S + ACA+  +L   ++++ +  R       F+ ++L++M++ C S   A +       
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------- 379

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      VFD    R+VV W+ ++  Y    R  EA+  +R M R G+ P+ ++F+
Sbjct: 380 -----------VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428

Query: 231 NVFPALSSLG 240
            +  A +  G
Sbjct: 429 GLLMACNHSG 438


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 230/724 (31%), Positives = 381/724 (52%), Gaps = 58/724 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
           A ++F          WNTII G +  N  Y A+  L+ +M   + +   D+YTYSSVL A
Sbjct: 26  AYKVFRDTLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEM--CNGFQKPDSYTYSSVLAA 82

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    LR GK V    I+C +    FV  S++++Y+ C    +A               
Sbjct: 83  CASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAR-------------- 127

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VF  +   +VV+W  ++S Y K+     A+  FR M   G+  ++ +  +V  A 
Sbjct: 128 ----EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISAC 183

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTE 295
                   A  V+  + K G  +  D  VA++ I M ++ G  + + ++F++  + R   
Sbjct: 184 GRPSMVCEASQVHAWVFKSG--FYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQN 241

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           + N M+  + QN  P +AI LF ++L+ + +  D+ +  S LS    L  L+LG+Q+H+Y
Sbjct: 242 IVNVMVTSFSQNKKPGKAIRLFTRMLQ-EGLNPDEFSVCSLLSV---LDCLNLGKQVHSY 297

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            +K+ + L + V +++                      +D   W +MIS F + G   E 
Sbjct: 298 TLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREA 357

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLID 453
           + L  EM  +G   D  T+ A+L+  S+L +    K+ H Y LR GI   GM   S L++
Sbjct: 358 IGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID-RGMPLGSALVN 416

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            Y+K G +K AR+++++    + D  + +++I+GY+Q+GL+++ F+ FR M+    + + 
Sbjct: 417 TYSKCGSLKLARKVYDRLP--EMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDS 474

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
             I+S+L A       ELG Q+H +  +  L     VG+SL+ MYSK G I      F++
Sbjct: 475 YAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQ 534

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I   + + +T +I  Y QHG +  AL ++  MK  G +PD +TFV VLSACS+ GLV+EG
Sbjct: 535 INGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEG 594

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
               + M ++Y I+P   HY C+ D LGR G++ EA  F+     + + L +WG+LL +C
Sbjct: 595 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDAL-VWGTLLAAC 653

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           +++G  EL ++ AKK +E++  ++  G +V LSNI AE G W+ V++ RK M+  G++KE
Sbjct: 654 KIYGDVELGKLAAKKAIELEPSDA--GAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKE 711

Query: 754 VGCS 757
            G S
Sbjct: 712 PGWS 715



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 195/381 (51%), Gaps = 25/381 (6%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V SS I  +++   F+ A K+F + L  N   WNT+I G ++N +     +LF ++    
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-----FVALPVIVLNA--------- 370
           +   D  T+ S L+A + L+EL  G+ + A +IK      FV   ++ L A         
Sbjct: 69  QKP-DSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKCGHMAEAR 127

Query: 371 -VIER----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V  R     VVSW  M+S + ++      L +  EM+  G  I+S TVT+++SA     
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPS 187

Query: 426 NQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
                 Q HA++ + G + +  + + LI M +KSG I  + ++FE  D   R Q   N M
Sbjct: 188 MVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDD-IRRQNIVNVM 246

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           +  ++QN    +A   F +ML+  + P+  ++ S+L     +  + LGKQ+H ++++  L
Sbjct: 247 VTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGL 303

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
             ++ VG+SL  MYSK G +  + ++F +IP K++  + +MI G+ ++G    A+ LF  
Sbjct: 304 ILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSE 363

Query: 605 MKGCGIEPDAITFVAVLSACS 625
           M   G  PD  T  AVL+ CS
Sbjct: 364 MLDEGTSPDESTLAAVLTVCS 384



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 23/227 (10%)

Query: 16  TATPPPPQLPQIH--SLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIW 73
           ++ P  P+  +IH  +L   I +   P   + ++   + G   LAR+++D +     V  
Sbjct: 384 SSLPSLPRSKEIHGYTLRAGIDR-GMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSC 442

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           +++I G+  + L  +  LL+  M  S    S D+Y  SS+LKA   +    +G  VH + 
Sbjct: 443 SSLISGYSQHGLVQDGFLLFRDMVMSG--FSMDSYAISSILKAAVLSEESELGAQVHAYI 500

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
            +        V +SLL MYS                   +   +  CK F  +   +++A
Sbjct: 501 TKIGLCTEPSVGSSLLTMYS------------------KFGSIEDCCKAFSQINGPDLIA 542

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           W  +++ Y +  +  EA++ + +M   G +P  ++FV V  A S  G
Sbjct: 543 WTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGG 589


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 202/589 (34%), Positives = 327/589 (55%), Gaps = 32/589 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           K+FD +   ++  WN I+  YV    + +A+R F  M+  G   P   +F  V  A S +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVM 197

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                  +++G    L S + +++FV +S + MY   G    AR++F+  L+R+   WNT
Sbjct: 198 SMLNVGVLIHGR--ALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNT 255

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI G+ QN  P EA+ +F  +++   +  D  T +SAL +   L+EL+LG ++H  + KN
Sbjct: 256 MISGWFQNGRPEEALAVFNSMMD-ARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKN 314

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            +   + V NA++                    E+DV++W +MI+ ++ NG     L L 
Sbjct: 315 HLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALC 374

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKS 458
             MQ  G + ++VT+ +LLSA ++L     GK  HA+++R  +  + +  + LIDMYAK 
Sbjct: 375 PAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKC 434

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             +  + Q+F K  +  +    WNA+++G   N L  EA   F+ ML   V  N  T  S
Sbjct: 435 NAVSYSFQVFAK--TSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNS 492

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP--E 576
           V+PA   + +++    LH + +R      + V T LIDMYSK G ++YA  +F +IP  E
Sbjct: 493 VIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKE 552

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ + ++ +I GYG HG  E A+ LF  M   G++P+ ITF +VL ACS+ GLVD+GL +
Sbjct: 553 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTL 612

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M + Y   P   HY CV D+LGR G++ EAY+ +K +  + N   IWG+LLG+C +H
Sbjct: 613 FKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQN-HSIWGALLGACLIH 671

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
            + EL EV A++L E++  ++  G ++LL+NIYA  G W++ +  + ++
Sbjct: 672 QNVELGEVAAERLFELEPEST--GNYILLANIYAAVGRWKDAENHKLQL 718



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 302/636 (47%), Gaps = 82/636 (12%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR+LFD ++ P+  +WN II  +V     ++A+ ++  M  S      D YT+  V+KA
Sbjct: 135 LARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWP-DKYTFPLVIKA 193

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+    L +G  +H   +    + + FV NSLL MY  C                   K 
Sbjct: 194 CSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNC------------------GKV 235

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            L  +VF+ M +R+VV+WNT++S + +  R  EA+  F  M+   + P + + V+  P+ 
Sbjct: 236 GLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC 295

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             L + +    V+ L+ K  +     + V ++ + MY+  G  D A  +F    E++   
Sbjct: 296 GHLKELELGIKVHKLVQK--NHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVIT 353

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +MI GY+ N +   A+ L    ++LD +V + VT  S LSA + L  L  G+ LHA++
Sbjct: 354 WTSMINGYIMNGNAKSALAL-CPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWV 412

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           ++  +   V+V+ A+I+                    +  V WN ++S  + N L  E +
Sbjct: 413 MRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAV 472

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMY 455
            L   M  +    +  T  +++ A + L +       H+YL+R G I    + + LIDMY
Sbjct: 473 GLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMY 532

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K G +  A +IF++  + ++D   W+ +IAGY  +G  E A + F QM+   + PN +T
Sbjct: 533 SKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEIT 592

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             SVL AC               S R L+D  + +   +I+ Y  S + N+         
Sbjct: 593 FTSVLHAC---------------SHRGLVDDGLTLFKYMIENYPSSPLPNH--------- 628

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                 YT ++   G+ G  + A  L +SM     + +   + A+L AC    L+ + ++
Sbjct: 629 ------YTCVVDLLGRAGRLDEAYDLIKSMP---FQQNHSIWGALLGAC----LIHQNVE 675

Query: 636 IFDLMQQE-YKIQP-STEHYCCVADMLGRVGKVVEA 669
           + ++  +  ++++P ST +Y  +A++   VG+  +A
Sbjct: 676 LGEVAAERLFELEPESTGNYILLANIYAAVGRWKDA 711



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/496 (21%), Positives = 225/496 (45%), Gaps = 50/496 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  LARQ+F+ + + + V WNT+I G+  N  P EA+ +++ M  +      D+ T  S
Sbjct: 233 GKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDAR--VEPDSATIVS 290

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L +C   + L +G  VH    +        V N+L++MYS C    +A +         
Sbjct: 291 ALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASL--------- 341

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VF   + ++V+ W ++++ Y+       A+     M   G+ P+ ++  ++
Sbjct: 342 ---------VFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +SL   K    ++  +++   +  +D+ V ++ I MYA+     ++ ++F     +
Sbjct: 393 LSACASLCCLKQGKSLHAWVMR--KKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMK 450

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            T  WN ++ G + N    EA+ LF  +L ++E+  +  TF S + A + L +L     L
Sbjct: 451 RTVPWNALLSGLIHNELAREAVGLFKSML-IEEVEANHATFNSVIPAYAILADLKQVMNL 509

Query: 353 HAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNG 390
           H+Y++++     + V+  +I                      E+D++ W+ +I+ +  +G
Sbjct: 510 HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHG 569

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH--GIHFEGME 448
             +  ++L  +M   G   + +T T++L A S+    D G     Y++ +          
Sbjct: 570 HGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHY 629

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LE 506
           + ++D+  ++G +  A  +  K+    ++ + W A++     +  +E   VA  ++  LE
Sbjct: 630 TCVVDLLGRAGRLDEAYDLI-KSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELE 688

Query: 507 HNVTPNVVTIASVLPA 522
              T N + +A++  A
Sbjct: 689 PESTGNYILLANIYAA 704


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 222/714 (31%), Positives = 368/714 (51%), Gaps = 62/714 (8%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           S VLK C    +   G+ +HC  ++C F      V  +L++MY  C    D  +V     
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVV----- 157

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                        F+ M +RNVV W ++++ YV+     + +  F  M   G+ P+  +F
Sbjct: 158 -------------FEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTF 204

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A++S G       V+   VK G    + +FV +S I MY++ G  + A+ +F   
Sbjct: 205 TSVLSAVASQGAVDLGRRVHAQSVKFGCR--STVFVCNSLINMYSKCGLVEEAKAVFRQM 262

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELF----VQVLELDEIVFDDVTFLSALSAVSQLQE 345
             R+   WNT++ G + N H +EA++LF      + +L +  +  V  L A      L++
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA-----NLKQ 317

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMIS 384
           L L +QLH+ ++K+       V+ A+++                     ++VVSW  MI 
Sbjct: 318 LALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIG 377

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-H 443
             +QN        L   M++     +  T + +L+A+  +    +  Q HA +++    H
Sbjct: 378 GCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKTNYQH 433

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+  Y+K G  + A  IF+  D   +D   W+AM++ Y+Q G  + A   F +
Sbjct: 434 APSVGTALLASYSKLGNTEEALSIFKMIDH--KDVVAWSAMLSCYSQAGDCDGATNVFIK 491

Query: 504 MLEHNVTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    + PN  TI+S + AC +P   I+ G+Q H  SI+Y     + VG++L+ MY++ G
Sbjct: 492 MSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKG 551

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I+ A  VF +  +++ V++ +MI GY QHG S+ AL  FR M+  GIE D  TF+AV+ 
Sbjct: 552 SIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIV 611

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
            C++AGLV EG Q FD M  ++ I P+ EHY C+ D+  R GK+ E    ++ +      
Sbjct: 612 GCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGA 671

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W +LLG+CR+H + EL ++ A+KLL ++  +S    +VLLSNIYA  G W+  D+VR
Sbjct: 672 M-VWRTLLGACRVHKNVELGKLAAQKLLLLEPDDS--ATYVLLSNIYAAAGRWKERDEVR 728

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K M  + ++KE GCSWI +   V+ F + D+ HP S +IY  L+ +   ++  G
Sbjct: 729 KLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEG 782



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 263/548 (47%), Gaps = 65/548 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R +F+ + +   V W +++ G+V      + + L+ +M+    +   + +T++SVL A 
Sbjct: 154 GRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWP--NPFTFTSVLSAV 211

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    + +G+ VH   ++     + FV NSL+NMYS C         GL    V+ +K  
Sbjct: 212 ASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKC---------GL----VEEAK-- 256

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  R++V+WNT+++  +  E  +EA++ F        + S  ++  V    +
Sbjct: 257 ---AVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA 313

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL----ERN 293
           +L     A  ++  ++K G  + +D  V ++ +  Y++ G  D A  IF   L     +N
Sbjct: 314 NLKQLALARQLHSCVLKHG--FHSDGNVMTAIMDAYSKCGELDDAFNIF---LLMPGSQN 368

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  MIGG +QN     A  LF ++ E D +  ++ T+ + L+A   +    L  Q+H
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMRE-DNVKPNEFTYSTVLTASIPI----LLPQIH 423

Query: 354 AYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           A IIK N+   P +                   +   +  +DVV+W+ M+S + Q G  D
Sbjct: 424 AQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCD 483

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
               +  +M  QG   +  T+++ + A AS     D G+Q HA  +++       + S L
Sbjct: 484 GATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSAL 543

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + MYA+ G I +AR +FE+    DRD  +WN+MI+GY Q+G  +EA   FRQM    +  
Sbjct: 544 VTMYARKGSIDSARIVFERQT--DRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG----TSLIDMYSKSGVINYA 567
           +  T  +V+  C   G ++ G+Q   +    ++D N+       + ++D+YS++G ++  
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQ---YFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDET 658

Query: 568 ANVFAKIP 575
            N+   +P
Sbjct: 659 MNLIEGMP 666


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 316/560 (56%), Gaps = 28/560 (5%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           N+ ++ +     YA  G    A  IFD  + +N+ +WN MI GY  N  P++++ L+ ++
Sbjct: 93  NNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREM 152

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA-----------YIIKNFVAL------ 363
           L   +   D+ T+   L A   L  +++G+++H+           Y+  + +A+      
Sbjct: 153 LCFGQRA-DNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGD 211

Query: 364 ---PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                +V + + ERD+ SWNTMIS + +N       ++   M K G   D  T+  LLSA
Sbjct: 212 MGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSA 271

Query: 421 ASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            ++L+    GK  H Y +R+ I  + +   + LI+MY     +  AR++FE+     +D 
Sbjct: 272 CADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRW--KDT 329

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +WN+MI GY +NG   E+   FR+M      P+ VT  +VL AC+ +  +  G  +H +
Sbjct: 330 VSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSY 389

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            ++   D N  VGT+L+DMYSK G +  +  VF ++P+K+ V+++ M+ GYG HG    A
Sbjct: 390 LVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREA 449

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           +S+   MK   + PD   F ++LSACS+AGLV EG +IF  M++EY ++P+  HY C+ D
Sbjct: 450 ISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVD 509

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G + EAY  ++ + E     +IW +LL + RLH + +LAE+ A+K+ +M+ +  +
Sbjct: 510 LLGRAGHLDEAYVIIRTM-EIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPK--V 566

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
              ++ LSNIYA E  W++V++VR  +R +GL+K  GCS+I++   V+RF   D+ H Q+
Sbjct: 567 VSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQT 626

Query: 779 HKIYEMLERLAMEMRNAGNK 798
             IY  L  L  +++ AG K
Sbjct: 627 EDIYAKLNELKQQLKEAGYK 646



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 144/565 (25%), Positives = 246/565 (43%), Gaps = 88/565 (15%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPT-IRSRLSKI-CQEGRPHLARQLFDSITRPTTVIW 73
           T T    Q  Q+H+       L+  T + ++L+      G    A  +FD I    + +W
Sbjct: 70  TNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLW 129

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N +I G+  N LP ++++LY +M         DN+TY  VLKAC +   + IG+ VH   
Sbjct: 130 NFMIRGYASNGLPMKSLVLYREMLCFGQ--RADNFTYPFVLKACGDLLLVEIGRRVHSEV 187

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           + C      +V NSLL MY+             K+ ++  ++      VFD M  R++ +
Sbjct: 188 VVCGLESDIYVGNSLLAMYA-------------KFGDMGTARM-----VFDRMAERDLTS 229

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WNT++S Y K      A   F +M + G+     + + +  A + L   K   V++G  V
Sbjct: 230 WNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAV 289

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           +      N  F  +S I MY    C   AR++F+    ++T  WN+MI GY +N    E+
Sbjct: 290 RNSIGNYNKFFT-NSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFES 348

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI- 372
           + LF + + LD    D VTF++ L A  Q+  L  G  +H+Y++K       IV  A++ 
Sbjct: 349 LRLF-RRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVD 407

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                              ++ +VSW+ M++ +  +G   E + ++  M+    + D+  
Sbjct: 408 MYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGV 467

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF---EK 470
            T++LSA S+                                  +GL+   ++IF   EK
Sbjct: 468 FTSILSACSH----------------------------------AGLVVEGKEIFYKMEK 493

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             +     + ++ M+    + G L+EA+V  R M    + P     A++L A     NI+
Sbjct: 494 EYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTM---EIKPTSDIWAALLTASRLHKNIK 550

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLI 555
           L +     S + + D N  V +S I
Sbjct: 551 LAE----ISAQKVFDMNPKVVSSYI 571



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 192/389 (49%), Gaps = 28/389 (7%)

Query: 337 LSAVSQLQELDLGQQLHAYIIK---------------------NFVALPVIVLNAVIERD 375
           L + +  +    GQQLHA++I                        ++   ++ + ++ ++
Sbjct: 66  LQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKN 125

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
              WN MI  +  NGL  + L+L  EM   G   D+ T   +L A  +L   ++G++ H+
Sbjct: 126 SFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHS 185

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            ++  G+  +  + + L+ MYAK G + TAR +F++    +RD  +WN MI+GY +N   
Sbjct: 186 EVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDR--MAERDLTSWNTMISGYAKNADS 243

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTS 553
             AF+ F  M +  +  +  T+  +L AC  +  ++ GK +HG+++R  + + N F   S
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI+MY     +  A  +F ++  K++V++ +MILGY ++G +  +L LFR M   G  PD
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +TF+AVL AC     +  G+ I   + ++     +T     + DM  + G +  +    
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKK-GFDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            E+ ++   L  W +++    LHG    A
Sbjct: 423 DEMPDKS--LVSWSAMVAGYGLHGRGREA 449



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 140/279 (50%), Gaps = 11/279 (3%)

Query: 379 WNTMISAFVQNGLDD--EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           +N+  S F Q  +    E  + + E   Q + + S+   ALL + +N ++   G+Q HA+
Sbjct: 25  YNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAH 84

Query: 437 LLRHGI--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           ++   I  +   + + L   YA  GL+  A  IF+      ++   WN MI GY  NGL 
Sbjct: 85  MISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL--KNSFLWNFMIRGYASNGLP 142

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            ++ V +R+ML      +  T   VL AC  +  +E+G+++H   +   L+ +++VG SL
Sbjct: 143 MKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSL 202

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           + MY+K G +  A  VF ++ E++  ++ TMI GY ++  S  A  +F  M   G+  D 
Sbjct: 203 LAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADC 262

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            T + +LSAC+    V EG  I       Y ++ S  +Y
Sbjct: 263 TTLLGLLSACADLKAVKEGKVI-----HGYAVRNSIGNY 296



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 474 GDRDQATWNAMIAGYTQNGLLE--EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
           G RD+  +N+  + ++Q  + +  E  ++ R+          +   ++L +     + + 
Sbjct: 19  GGRDR-EYNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQCGALLQSFTNTKSFKQ 77

Query: 532 GKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           G+QLH   I + +L+ N ++ T L   Y+  G+++ A  +F  I  KNS  +  MI GY 
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +G+  ++L L+R M   G   D  T+  VL AC    LV+ G ++
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 229/733 (31%), Positives = 380/733 (51%), Gaps = 51/733 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR+LF  I  P  V WN +I G        EAI  + ++KK+         +  S
Sbjct: 257 GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTG--LKATRSSLGS 314

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL A A    L  G  VH    +   + + +V ++L+NMY+ C                 
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKC----------------- 357

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            SK D   +VF+++  RN+V WN ++  + +     E +  F  M R G +P   +F ++
Sbjct: 358 -SKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSI 416

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A +SL        ++ +++K  +++ ++LFVA++ + MYA+ G    ARK F+     
Sbjct: 417 FSACASLHYLNFGGQLHTVMIK--NKFASNLFVANALVDMYAKSGALKEARKQFELMKIH 474

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I GYVQ  +  EA  +F +++  + ++ D+V+  S +SA + +QEL  GQQ 
Sbjct: 475 DNVSWNAIIVGYVQEEYNDEAFFMFRRMVS-NGVLPDEVSLASIVSACANVQELKRGQQC 533

Query: 353 HAYIIK---------------NFVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLD 392
           H  ++K                +V   V+     V  ++  R+VVS N +I+ +    L+
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLE 593

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESY 450
            E + L  E+Q  G     VT   LL         ++G+Q H  +++ G     E +   
Sbjct: 594 -EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVS 652

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ +Y  S     +  +F +     +    W A+I+GY Q    E+A   ++ M   N+ 
Sbjct: 653 LLCLYMNSQRFVDSETLFSELQY-PKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNIL 711

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+    ASVL AC  M +++ G+++H        + +    +SLIDMY+K G +  +  V
Sbjct: 712 PDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQV 771

Query: 571 FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           F ++P +N+V ++ +MI+G  ++G +E AL +F+ M+   I PD +TF+ VLSACS+AG 
Sbjct: 772 FREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGR 831

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V EG ++FDLM   YK+ P  +H  C+ D+LGR G + EA EF+ +LG + + + +W +L
Sbjct: 832 VSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM-LWSTL 890

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+CR HG     +  A KL+E+  ++S    +VLLS+IYAE  NW     +R+EM+ +G
Sbjct: 891 LGACRKHGDEVRGKRAADKLMELKPQSSS--SYVLLSSIYAESENWSGAVSLRREMKLKG 948

Query: 750 LRKEVGCSWIDVG 762
           ++K  G SWI+ G
Sbjct: 949 VKKLPGYSWIEPG 961



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 193/730 (26%), Positives = 337/730 (46%), Gaps = 85/730 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A++ F  + +     WN+++  ++ + L    +  +  M         + +T++ 
Sbjct: 90  GNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHE--VRPNEFTFAM 147

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC+  +++  G+ VHC   +       F    L++MY+ C    DA +V    + +D
Sbjct: 148 VLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLD 207

Query: 173 YSKYDLV-------------CKVFDTMRR------------------------------- 188
              +  +              KVFD M+R                               
Sbjct: 208 TVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFT 267

Query: 189 ----RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
                NVVAWN ++S + K     EA+  F  + + G++ +  S  +V  A++SL     
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
             +V+    K G +  ++++V S+ + MYA+    D A+++F++  ERN  +WN M+GG+
Sbjct: 328 GSMVHAQATKEGLD--DNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            QN    E +E F   ++      D+ TF S  SA + L  L+ G QLH  +IKN  A  
Sbjct: 386 AQNGLAQEVMEFF-SCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASN 444

Query: 365 VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + V NA+++                     D VSWN +I  +VQ   +DE   +   M  
Sbjct: 445 LFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKT 463
            G + D V++ +++SA +N++    G+Q H  L++ G+       S LIDMY K G++  
Sbjct: 505 NGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR +F    S  R+  + NA+IAGYT  G LEEA   F+++    + P  VT A +L  C
Sbjct: 565 ARDVFYSMPS--RNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621

Query: 524 NPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVT 581
           +    + LG+Q+HG  +++  L  +  V  SL+ +Y  S     +  +F+++   K  V 
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVV 681

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T +I GY Q    E+AL  ++ M+   I PD   F +VL AC+    +  G +I  L+ 
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLI- 740

Query: 642 QEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             +    + +   C  + DM  + G V  + +  +E+    NV+  W S++     +G++
Sbjct: 741 --FHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVIS-WNSMIVGLAKNGYA 797

Query: 700 ELAEVVAKKL 709
           E A  + K++
Sbjct: 798 EEALEIFKQM 807



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 213/464 (45%), Gaps = 66/464 (14%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P L +L    +A V++   +K+G        + +  + +Y + G  DFA+K F    +++
Sbjct: 52  PVLQAL---STAKVIHSKSLKIGVGLKG--LLGNVIVDLYVKCGNVDFAQKAFSRLEKKD 106

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN+++  Y+ +      ++ FV +    E+  ++ TF   LSA S LQ+++ G+Q+H
Sbjct: 107 VFAWNSVLSMYLDHGLFATVVQSFVCMWN-HEVRPNEFTFAMVLSACSGLQDVNFGRQVH 165

Query: 354 AYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
             + K                     ++    +V +  +  D VSW  +I+ +V++G   
Sbjct: 166 CGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPM 225

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E + +   MQ+ G   D +T+  +++A                                 
Sbjct: 226 EAVKVFDRMQRVGHAPDQITLVTVVNA--------------------------------- 252

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            Y   G +  AR++F +    + +   WN MI+G+ + G  EEA   F ++ +  +    
Sbjct: 253 -YVALGRLADARKLFTQIP--NPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATR 309

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            ++ SVL A   +  +  G  +H  + +  LD NV+VG++L++MY+K   ++ A  VF  
Sbjct: 310 SSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNS 369

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + E+N V +  M+ G+ Q+G+++  +  F  MK  G +PD  TF ++ SAC+    ++ G
Sbjct: 370 LGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFG 429

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA---YEFVK 674
            Q+  +M +  K   +      + DM  + G + EA   +E +K
Sbjct: 430 GQLHTVMIKN-KFASNLFVANALVDMYAKSGALKEARKQFELMK 472


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 201/570 (35%), Positives = 318/570 (55%), Gaps = 30/570 (5%)

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           V  G     + ++A+     YA  G   +A+ IFD  + +N+ +WN+MI GY  NN P  
Sbjct: 48  VTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSR 107

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+ L++++L   +   D+ T+   L A   L   ++G+++HA ++   +   V V N+++
Sbjct: 108 ALFLYLKMLHFGQKP-DNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSIL 166

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                                RD+ SWNTM+S FV+NG       +  +M++ GF+ D  
Sbjct: 167 SMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRT 226

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL----IDMYAKSGLIKTARQIF 468
           T+ ALLSA  ++ +  VGK+ H Y++R+G        +L    IDMY     +  AR++F
Sbjct: 227 TLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLF 286

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E      +D  +WN++I+GY + G   +A   F +M+     P+ VT+ SVL ACN +  
Sbjct: 287 EGLRV--KDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISA 344

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + LG  +  + ++     NV VGT+LI MY+  G +  A  VF ++PEKN    T M+ G
Sbjct: 345 LRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTG 404

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           +G HG    A+S+F  M G G+ PD   F AVLSACS++GLVDEG +IF  M ++Y ++P
Sbjct: 405 FGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEP 464

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
              HY C+ D+LGR G + EAY  ++ +  + N  ++W +LL +CRLH + +LA + A+K
Sbjct: 465 RPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNE-DVWTALLSACRLHRNVKLAVISAQK 523

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L E++  + + GY V LSNIYA E  WE+V+ VR  + +R LRK    S++++   V++F
Sbjct: 524 LFELNP-DGVSGY-VCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
              D  H QS  IY  L+ L  +++ AG K
Sbjct: 582 FVGDTSHEQSDDIYAKLKDLNEQLKKAGYK 611



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 240/522 (45%), Gaps = 55/522 (10%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHL--ARQLFDSITRPTTVIW 73
           T +    Q  Q+H+       L+  T  +     C     H+  A+ +FD I    + +W
Sbjct: 33  TNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLW 92

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N++I G+ CNN P  A+ LY +M         DN+TY  VLKAC +     +G+ VH   
Sbjct: 93  NSMIRGYACNNSPSRALFLYLKMLHFGQKP--DNFTYPFVLKACGDLLLREMGRKVHALV 150

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           +        +V NS+L+MY              K+ +V+ ++      VFD M  R++ +
Sbjct: 151 VVGGLEEDVYVGNSILSMY-------------FKFGDVEAARV-----VFDRMLVRDLTS 192

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WNT++S +VK      A   F  M R G      + + +  A   + D K    ++G +V
Sbjct: 193 WNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVV 252

Query: 254 KLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           + G S  V + F+ +S I MY        ARK+F+    ++   WN++I GY +     +
Sbjct: 253 RNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQ 312

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+ELF +++ +  +  D+VT +S L+A +Q+  L LG  + +Y++K    + V+V  A+I
Sbjct: 313 ALELFGRMVVVGAVP-DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALI 371

Query: 373 --------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                               E+++ +   M++ F  +G   E + + YEM  +G   D  
Sbjct: 372 GMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEG 431

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLR------HGIHFEGMESYLIDMYAKSGLIKTARQ 466
             TA+LSA S+    D GK+    + R         H+    S L+D+  ++G +  A  
Sbjct: 432 IFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHY----SCLVDLLGRAGYLDEAYA 487

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + E N     ++  W A+++    +  ++ A ++ +++ E N
Sbjct: 488 VIE-NMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELN 528


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 195/559 (34%), Positives = 315/559 (56%), Gaps = 28/559 (5%)

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           V++++V +S + MY +LG    AR++FD   +RN+  W+TM+ GY       EA +LF  
Sbjct: 44  VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 103

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
           +LE       +    + LSAVS    L +G+Q+H  I+K+ +   V V N+++       
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 163

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        ER+ ++W+ MI+ + QNG  D  + +  +M   GF     T   +L+
Sbjct: 164 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 223

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A+S+L    VGKQ H  +++ G   +  ++S L+DMYAK G I  A++ F++    + D 
Sbjct: 224 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQ--LYEVDI 281

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
             W AM++G+ QNG  EEA   + +M +  + P+  TIAS L AC  +  +E GKQLH  
Sbjct: 282 VLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQ 341

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            ++Y L     VG++L  MYSK G +    +VF +IP+++ + + ++I G+ Q+G    A
Sbjct: 342 IVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 401

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L LF  MK  G  PD ITF+ +L ACS+ GLVD G + F LM ++Y + P  +HY C+ D
Sbjct: 402 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 461

Query: 659 MLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           +L R G + EA +F++ +  + G  L  W  +LG+CR     ++     ++L+E+ T +S
Sbjct: 462 ILSRAGMLKEAKDFIESITIDHGTCL--WRIVLGACRSLRDFDVGAYAGERLMELGTGDS 519

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
               ++LLSNIYA +  W +V++VR  MR RG+ K+ GCSW+++   V+ F   +Q+HP+
Sbjct: 520 SA--YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPE 577

Query: 778 SHKIYEMLERLAMEMRNAG 796
           +  I   L RLA  M++ G
Sbjct: 578 AENINAQLRRLAKHMKDEG 596



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 222/466 (47%), Gaps = 46/466 (9%)

Query: 28  HSLSPPIPKLKTPT--IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           H+L+  IP   +      S L+  C+ G    AR++FD + +  +  W+T++ G+     
Sbjct: 34  HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             EA  L+  M +  P    + +  ++VL A +    L +G+ +H   ++        V 
Sbjct: 94  SEEAFDLFRLMLEECPSEKSE-FVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVE 152

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSL+ MY+       A  +G  +             VF++ R RN + W+ +++ Y +  
Sbjct: 153 NSLVTMYAK------AGCMGAAF------------HVFESSRERNSITWSAMITGYAQNG 194

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
               AV  F  M   G  P+  +FV V  A S LG        +GL+VKLG E    ++V
Sbjct: 195 EADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEV--QIYV 252

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            S+ + MYA+ GC   A++ FD   E +  +W  M+ G+VQN    EA+ L+ + ++ + 
Sbjct: 253 KSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYAR-MDKEG 311

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA--------------- 370
           I+    T  S L A + +  L+ G+QLH  I+K  + L   V +A               
Sbjct: 312 IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGM 371

Query: 371 -----VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                + +RDV++WN++IS F QNG  +  L L  EM+ +G + D++T   +L A S++ 
Sbjct: 372 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMG 431

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
             D G +  + + +       ++ Y  ++D+ +++G++K A+   E
Sbjct: 432 LVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 477


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 210/643 (32%), Positives = 347/643 (53%), Gaps = 30/643 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF  M  R+V +WN +V  Y K+    EA+  +  M+  G+RP   +F  V  +   + 
Sbjct: 144 RVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 203

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D++    V+  +++ G  +  ++ V ++ + MYA+ G    ARK+FD+    +   WN M
Sbjct: 204 DWRMGREVHAHVLRFG--FGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAM 261

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I G+ +N      +ELF+ +L  DE+  + +T  S   A   L ++   +++H   +K  
Sbjct: 262 IAGHFENGECNAGLELFLTMLH-DEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRG 320

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            A  V   N++I+                    RD ++W  MIS + +NG  D+ L +  
Sbjct: 321 FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA 380

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
            M+      D +T+ + L+A + L + DVG + H      G I +  + + +++MYAKS 
Sbjct: 381 LMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSK 440

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A ++F+     ++D  +W++MIAG+  N    EA   FR ML  +V PN VT  + 
Sbjct: 441 RIDKAIEVFKCMH--EKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNSVTFIAA 497

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC   G +  GK++H   +R  ++   ++  +LID+Y K G   YA   F     K+ 
Sbjct: 498 LAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDV 557

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI G+  HG  + ALS F  M   G  PD +TFVA+L ACS  G+V EG ++F  
Sbjct: 558 VSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHS 617

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M ++Y I P+ +HY C+ D+L R G++ EAY F+ E+    +   +WG+LL  CR+H H 
Sbjct: 618 MTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDA-AVWGALLNGCRIHRHV 676

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL E+ AK +L ++  ++  GYHVLL ++YA+   W+ + +VRK MRE+GL  + GCSW+
Sbjct: 677 ELGELAAKYVLALEPNDA--GYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWV 734

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           +V G V+ F + D+ HPQ  +I  +LE +   M+ +G   +++
Sbjct: 735 EVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES 777



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 270/553 (48%), Gaps = 50/553 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS + + G    A ++F  +       WN ++ G+  + L  EA+ LY +M  +      
Sbjct: 130 LSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG--VRP 187

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D YT+  VL++C    + R+G+ VH H +R        V N+L+ MY+ C   + A    
Sbjct: 188 DVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR--- 244

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          KVFD+M   + ++WN +++ + +       +  F  ML   ++P+
Sbjct: 245 ---------------KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPN 289

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            ++  +V  A   L D   A  ++GL VK G  +  D+   +S I MYA LG    AR +
Sbjct: 290 LMTITSVTVASGLLSDVTFAKEMHGLAVKRG--FAGDVAFCNSLIQMYASLGMMRQARTV 347

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   W  MI GY +N  P +A+E++  ++E++ +  DD+T  SAL+A + L  
Sbjct: 348 FSRMDTRDAMTWTAMISGYEKNGFPDKALEVYA-LMEVNNVSPDDITIASALAACACLGS 406

Query: 346 LDLGQQLHAYI-IKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
           LD+G +LH     K F++  ++V NA++                    E+DVVSW++MI+
Sbjct: 407 LDVGVKLHELAESKGFISY-IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIA 465

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            F  N  + E L     M       +SVT  A L+A +       GK+ HA++LR GI +
Sbjct: 466 GFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEY 524

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           EG + + LID+Y K G    A   F  +  G +D  +WN MIAG+  +G  + A   F Q
Sbjct: 525 EGYLPNALIDLYVKCGQTGYAWAQFCAH--GAKDVVSWNIMIAGFVAHGHGDTALSFFNQ 582

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M++    P+ VT  ++L AC+  G +  G +L H  + +Y +  N+     ++D+ S++G
Sbjct: 583 MVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAG 642

Query: 563 VINYAANVFAKIP 575
            +  A N   ++P
Sbjct: 643 QLTEAYNFINEMP 655



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 199/379 (52%), Gaps = 29/379 (7%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           L + ++ + M    G    A ++F    ER+   WN M+GGY ++    EA++L+ +++ 
Sbjct: 123 LRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMM- 181

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
              +  D  TF   L +   + +  +G+++HA++++      V VLNA++          
Sbjct: 182 WAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVM 241

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                       D +SWN MI+   +NG  + GL L   M       + +T+T++  A+ 
Sbjct: 242 AARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASG 301

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            L +    K+ H   ++ G  F G  ++   LI MYA  G+++ AR +F + D+  RD  
Sbjct: 302 LLSDVTFAKEMHGLAVKRG--FAGDVAFCNSLIQMYASLGMMRQARTVFSRMDT--RDAM 357

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           TW AMI+GY +NG  ++A   +  M  +NV+P+ +TIAS L AC  +G++++G +LH  +
Sbjct: 358 TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 417

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
                   + V  ++++MY+KS  I+ A  VF  + EK+ V++++MI G+  +  +  AL
Sbjct: 418 ESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEAL 477

Query: 600 SLFRSMKGCGIEPDAITFV 618
             FR M    ++P+++TF+
Sbjct: 478 YYFRHMLA-DVKPNSVTFI 495



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%)

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +G +++ M  + G   +A  VFAK+PE++  ++  M+ GYG+ G+ + AL L+  M   G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 610 IEPDAITFVAVLSACS 625
           + PD  TF  VL +C 
Sbjct: 185 VRPDVYTFPCVLRSCG 200


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 217/637 (34%), Positives = 348/637 (54%), Gaps = 40/637 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD + RR+ V+WN +++ +  +  + EA R  R M   G+  +T +  +   + +   
Sbjct: 48  RVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVAR 107

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  +  L +K G    N++F AS+ + +YA+ G    AR++FD   ERNT  WN +
Sbjct: 108 RPAIGAQLQSLALKSG--LANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNAL 165

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++     A+ELF++ +E + +V D+ TF S L+AV +     L  QLH  I+K  
Sbjct: 166 IAGYTESGDMASALELFLE-MEREGLVPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYG 223

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGL-ML 398
            AL + VLNA I                      RD++SWN M+ A+  NG+DDE +   
Sbjct: 224 SALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFF 283

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQD-VGKQTHAYLLRHGIHFEGME---SYLIDM 454
           V  MQ+ G   D  + T+++S+ S   + D  G+  H  +++  +  EG+    + LI M
Sbjct: 284 VRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL--EGVTPVCNALIAM 341

Query: 455 YAK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           Y +   + +++ A + F  N    +D  +WN+M+ GY+Q+GL  +A   FR M   NV  
Sbjct: 342 YTRYNENCMMEDAYKCF--NSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRT 399

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +    ++ L + + +  ++LGKQ+HG  I      N FV +SLI MYSKSG+I+ A   F
Sbjct: 400 DEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSF 459

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            +  + +SV +  MI GY QHG +E    LF  M       D ITFV ++++CS+AGLVD
Sbjct: 460 EEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVD 519

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG +I + M+ +Y +    EHY C  D+ GR G++ +A + +  +  E + + +W +LLG
Sbjct: 520 EGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAM-VWMTLLG 578

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG+ ELA  VA  L   + R      +VLLS++Y+  G W +   V++ M++RGL 
Sbjct: 579 ACRIHGNVELASDVASHLFVAEPRQH--STYVLLSSMYSGLGMWSDRATVQRVMKKRGLS 636

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           K  G S I+V   V+ F ++D+ HP+  +IYEML  L
Sbjct: 637 KVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 262/569 (46%), Gaps = 53/569 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + R   V WN ++     +    EA  L   M       + + +   S L++ 
Sbjct: 46  ARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQG--LASNTFALGSALRSA 103

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  R   IG  +    ++     + F  ++LL++Y+ C    DA                
Sbjct: 104 AVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR--------------- 148

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RN V+WN +++ Y ++     A+  F  M R G+ P   +F ++  A+ 
Sbjct: 149 ---QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVE 205

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
               +     ++G +VK GS     L V ++AI  Y++ G    +R+IFD   + R+   
Sbjct: 206 GPSCFLMHQ-LHGKIVKYGSAL--GLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLIS 262

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD-LGQQLHAY 355
           WN M+G Y  N    EA++ FV++++   +  D  +F S +S+ S+    D  G+ +H  
Sbjct: 263 WNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGL 322

Query: 356 IIKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLD 392
           +IK+ +     V NA+I                        +D VSWN+M++ + Q+GL 
Sbjct: 323 VIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLS 382

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYL 451
            + L     M  +    D    +A L ++S L    +GKQ H  ++  G    + + S L
Sbjct: 383 ADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSL 442

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MY+KSG+I  AR+ FE+ D        WNAMI GY Q+G  E   + F +ML+     
Sbjct: 443 IFMYSKSGIIDDARKSFEEADKS--SSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPL 500

Query: 512 NVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           + +T   ++ +C+  G ++ G + L+    +Y +   +      +D+Y ++G ++ A  +
Sbjct: 501 DHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKL 560

Query: 571 FAKIP-EKNSVTYTTMILGYGQHGMSERA 598
              +P E +++ + T++     HG  E A
Sbjct: 561 IDSMPFEPDAMVWMTLLGACRIHGNVELA 589



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 50/444 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   ARQ+FD +    TV WN +I G+  +     A+ L+ +M++       D  T++S
Sbjct: 142 GRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP--DEATFAS 199

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A  E  +  +   +H   ++  S     V N+ +  YS C S  D+           
Sbjct: 200 LLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSR---------- 248

Query: 173 YSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                   ++FD +   R++++WN ++  Y       EA++ F RMM   G+ P   SF 
Sbjct: 249 --------RIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFT 300

Query: 231 NVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAELGCFDFARKIFDN 288
           ++  + S  G D     V++GL++K   E V  +  A  A++  Y E    + A K F++
Sbjct: 301 SIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNS 360

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + ++T  WN+M+ GY Q+    +A++ F + +  + +  D+  F +AL + S+L  L L
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFF-RCMCSENVRTDEYAFSAALRSSSELAVLQL 419

Query: 349 GQQLHAYII------KNFVALPVIVL---NAVIE-----------RDVVSWNTMISAFVQ 388
           G+Q+H  +I       +FV+  +I +   + +I+              V WN MI  + Q
Sbjct: 420 GKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQ 479

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGM 447
           +G  +   +L  EM ++   +D +T   L+++ S+    D G +  +    ++G+    M
Sbjct: 480 HGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLR-M 538

Query: 448 ESYL--IDMYAKSGLIKTARQIFE 469
           E Y   +D+Y ++G +  A+++ +
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLID 562



 Score = 39.7 bits (91), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 12/184 (6%)

Query: 554 LIDMYSKSGVINYAA--NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           L+  YS+S     AA   VF ++P ++ V++  ++  +   G    A  L R+M   G+ 
Sbjct: 31  LLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLA 90

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
            +     + L + + A     G Q+  L  +   +  +      + D+  + G+V +A +
Sbjct: 91  SNTFALGSALRSAAVARRPAIGAQLQSLALKS-GLANNVFAASALLDVYAKCGRVRDARQ 149

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA--KKLLEMDTRNSMPGYHVLLSNIY 729
               + E   V   W +L+      G++E  ++ +  +  LEM+    +P      S + 
Sbjct: 150 VFDGMPERNTV--SWNALIA-----GYTESGDMASALELFLEMEREGLVPDEATFASLLT 202

Query: 730 AEEG 733
           A EG
Sbjct: 203 AVEG 206


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 186/555 (33%), Positives = 317/555 (57%), Gaps = 29/555 (5%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           DL +++  I MY + G    A  +FD  L+RN   W  ++ G++QN +P+E++ LF + +
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSK-M 64

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------- 373
            L  +  +D TF + L A   L  LD+G+Q+H   +K    +  +V N++I+        
Sbjct: 65  GLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRI 124

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       R+++SWN MI+ +   G  ++ L+L  +MQ+ G  +D  T T+ L A 
Sbjct: 125 NEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKAC 184

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE---GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           S+L     G Q HA+L+  G  +     +   LID+Y K G +  AR++F   +  ++  
Sbjct: 185 SDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE--EKHV 242

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +W A+I GY Q G L E+   FRQ+ E ++  +   ++S++        ++ GKQ+H F
Sbjct: 243 ISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAF 302

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           +I+     ++ V  S++DMY K G+IN A  +F+++P +N +++T MI GYG+HG+ + A
Sbjct: 303 AIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEA 362

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           + LF  M+    EPD +T++AVL  CS++GLV++G + F  +   + I+   EHY C+ D
Sbjct: 363 IRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVD 422

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G++ EA   V  +  E NV  IW +LL +CR+HG  EL + V   LL +D+ N  
Sbjct: 423 LLGRAGRLKEAKNLVDSMPLEANV-GIWQTLLSACRVHGDLELGKEVGGILLRLDSEN-- 479

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
           P  +V++SNIYA+ G W+  +++R+ ++ + L+KE G SW+++   V+ F   D  HP +
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLT 539

Query: 779 HKIYEMLERLAMEMR 793
            KI+E+L+ +   M+
Sbjct: 540 EKIHEILKEMERRMK 554



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 227/512 (44%), Gaps = 81/512 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +A  +FD + +   V W  ++ G + N  P E++LL+S+M  S      +++T+S+
Sbjct: 21  GRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSG--VKPNDFTFST 78

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            LKAC     L IG+ +H   ++   +    V NS+++MYS C                 
Sbjct: 79  NLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC----------------- 121

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + +    +F+ M  RN+++WN +++ Y       +A+  F+ M  +G      +F + 
Sbjct: 122 -GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S LG  K  + ++  L+  G  Y  +  VA + I +Y + G    AR++F +  E+
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  +I GY Q  +  E++ELF Q+ E   I  D     S +   +    +  G+Q+
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRE-SSIQVDGFILSSMMGVFADFALVQQGKQM 299

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           HA+ IK    + + V N++++                    R+V+SW  MI+ + ++GL 
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY- 450
            E + L  EMQ      D VT  A+L   S+    + G++  + L   HGI    +E Y 
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKAR-VEHYA 418

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            ++D+  ++G +K A+ + +                                       +
Sbjct: 419 CMVDLLGRAGRLKEAKNLVDS------------------------------------MPL 442

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
             NV    ++L AC   G++ELGK++ G  +R
Sbjct: 443 EANVGIWQTLLSACRVHGDLELGKEVGGILLR 474


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 228/749 (30%), Positives = 371/749 (49%), Gaps = 73/749 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ ++    V W  ++ G+  N L  EA+ LY QM ++    +   Y  SSVL +C
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPT--PYVLSSVLSSC 153

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +      G++VH    +       FV N+L+ +Y  C S                  + 
Sbjct: 154 TKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGS------------------FR 195

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VF  M  R+ V +NT++S + +      A+  F  M   G+ P  ++  ++  A +
Sbjct: 196 LAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACA 255

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLGD +    ++  L K G    +D  +  S + +Y + G  + A  IF+     N  +W
Sbjct: 256 SLGDLQKGTQLHSYLFKAGMS--SDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLW 313

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N ++  + Q N   ++ ELF Q ++   I  +  T+   L   +   E+DLG+Q+H+  +
Sbjct: 314 NLILVAFGQINDLAKSFELFCQ-MQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSV 372

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K       +V+  +I              VL  + E+DVVSW +MI+ +VQ+    + L 
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALA 432

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
              EMQK G   D++ + + +S  + ++    G Q HA +   G   +  + + L+++YA
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYA 492

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G I+ A   FE+ +   +D+ TWN +++G+ Q+GL EEA   F +M +  V  NV T 
Sbjct: 493 RCGRIREAFSSFEEIEH--KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S L A   +  I+ GKQ+H   I+        VG +LI +Y K G    A   F+++ E
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE 610

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N V++ T+I    QHG    AL  F  MK                         EGL  
Sbjct: 611 RNEVSWNTIITSCSQHGRGLEALDFFDQMK------------------------KEGLSY 646

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  +Y I+P  +HY CV D+ GR G++  A +FV+E+    + + +W +LL +C++H
Sbjct: 647 FKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAM-VWRTLLSACKVH 705

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+ E+ AK LLE++  +S    +VLLSN YA  G W N D+VRK MR+RG+RKE G 
Sbjct: 706 KNIEVGELAAKHLLELEPHDSAS--YVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGR 763

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SWI+V   V+ F   D+ HP + +IY  L
Sbjct: 764 SWIEVKNVVHAFFVGDRLHPLAEQIYNFL 792



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 229/476 (48%), Gaps = 34/476 (7%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            D  V +  I +Y++ G    AR++F+    R+   W  M+ GY QN    EA+ L+ Q 
Sbjct: 75  KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQ- 133

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           +    +V       S LS+ ++ +    G+ +HA   K        V NA+I        
Sbjct: 134 MHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGS 193

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        RD V++NT+IS   Q    +  L +  EMQ  G   D VT+++LL+A
Sbjct: 194 FRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAA 253

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            ++L +   G Q H+YL + G+  +  ME  L+D+Y K G ++TA  IF   + G+R   
Sbjct: 254 CASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF---NLGNRTNV 310

Query: 480 T-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
             WN ++  + Q   L ++F  F QM    + PN  T   +L  C   G I+LG+Q+H  
Sbjct: 311 VLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSL 370

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           S++   + +++V   LIDMYSK G +  A  V   + EK+ V++T+MI GY QH   + A
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDA 430

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVA 657
           L+ F+ M+ CGI PD I   + +S C+    + +GLQI   +    Y    S   +  + 
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSI--WNALV 488

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
           ++  R G++ EA+   +E+  +  +   W  L+        S L E   K  + MD
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEI--TWNGLVSG---FAQSGLHEEALKVFMRMD 539



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 145/281 (51%), Gaps = 16/281 (5%)

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSG 474
           AL +   N R   V  + HA  +  G+  + +  + LID+Y+K+GL+  AR++FE+  + 
Sbjct: 47  ALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSA- 105

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            RD  +W AM++GY QNGL EEA   +RQM    V P    ++SVL +C        G+ 
Sbjct: 106 -RDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRS 164

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H    +       FVG +LI +Y + G    A  VF  +P +++VT+ T+I G+ Q   
Sbjct: 165 VHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAH 224

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKIQPS 649
            E AL +F  M+  G+ PD +T  ++L+AC+  G + +G Q+        M  +Y ++ S
Sbjct: 225 GEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGS 284

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
                 + D+  + G  VE    +  LG   NV+ +W  +L
Sbjct: 285 ------LLDLYVKCGD-VETALVIFNLGNRTNVV-LWNLIL 317



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A   F+ I     + WN ++ GF  + L  EA+ ++ +M +S      + +T+ S
Sbjct: 495 GRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG--VKHNVFTFVS 552

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L A A    ++ GK +H   I+   +    V N+L+++Y  C S  DA+M         
Sbjct: 553 ALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKM--------- 603

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                     F  M  RN V+WNTI++   +  R +EA+  F  M + G+
Sbjct: 604 ---------EFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL 644


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 212/700 (30%), Positives = 364/700 (52%), Gaps = 50/700 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +++  A+ R L+  K++H   I+          + N L+  YS C               
Sbjct: 67  LIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKC--------------- 111

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S +    +VFD + +++V +W  ++    +   Y + +  F  +L   I P   +  
Sbjct: 112 ---SDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALS 168

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
               A   +      ++V+  ++  G  + +  FV +S + MYA+LG    + K+F++  
Sbjct: 169 AAIQACIGVDSIVVGEMVHAQVITRG--FSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLE 226

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   WN MI G+V N    EA   F+++L  +EI  +   F+S   A+ QL +++ G+
Sbjct: 227 NRNQVSWNAMISGFVSNGLYAEAYNSFLRMLG-EEIRPNVACFISVSKAIGQLGDVEKGR 285

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDV----------------------VSWNTMISAFVQ 388
            ++    +  +   + V  A+I+                         + WN MIS F  
Sbjct: 286 YINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTI 345

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +G  +E ++L   M +     D  T  + L++ +++R+ +  KQ H  + + G     + 
Sbjct: 346 SGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSIGVSLC 405

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+D YAK G +   R++F+  +  + +Q +W  ++  Y+Q+   E+A   F QM E  
Sbjct: 406 NALMDAYAKCGELDAMRKLFDTWE--ESNQISWTTLVTAYSQSSEWEDALSVFSQMREMG 463

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             PN VT + VL +C  + ++E G+Q+H  + +    ++  V + LIDMY+K G +  A 
Sbjct: 464 FQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAI 523

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF  + + + +++T MI GY QHGM++ AL LFR M+     P++ TF+ +L ACS+ G
Sbjct: 524 KVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGG 583

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LVDEGL+ F LM++ Y + P  EHY CV D+LGRVG++ EA++F+ ++  E +  ++W +
Sbjct: 584 LVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDE-KVWST 642

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LLG+CR+HG+ +LA++ A+K+L  +  +      VLLSN Y E GN E    VR  M+ +
Sbjct: 643 LLGACRVHGNIQLAKIAAQKVLSYNPDDFAA--LVLLSNTYREAGNIEGGLNVRNMMKSQ 700

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
            +RKE G SWI +GG +++F S DQ HPQ   IY+ L  L
Sbjct: 701 AMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVL 740



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 170/643 (26%), Positives = 317/643 (49%), Gaps = 61/643 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+FD I + +   W  +++G   N    + I  + ++         D Y  S+ ++AC
Sbjct: 117 ARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVP--DEYALSAAIQAC 174

Query: 118 AETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
               ++ +G+ VH   I R FS+ + FV  SLL MY+      D+               
Sbjct: 175 IGVDSIVVGEMVHAQVITRGFSSRT-FVNTSLLGMYAKLGRIGDS--------------- 218

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              CKVF+++  RN V+WN ++S +V    Y EA   F  ML   IRP+   F++V  A+
Sbjct: 219 ---CKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAI 275

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF-DNCLERNTE 295
             LGD +    +  +  ++G +  +++ V ++ I M+A+ GC   +  +F  N       
Sbjct: 276 GQLGDVEKGRYINRIAFEIGMQ--SNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVN 333

Query: 296 V-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           + WN MI G+  + H  EA+ LF+++ + + I  D  T+ S L++++ ++ L+  +QLH 
Sbjct: 334 LPWNAMISGFTISGHGEEAMLLFLRMCQ-NNIKRDVYTYCSTLNSIADMRSLEYVKQLHG 392

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
            I K+  ++ V + NA++                    E + +SW T+++A+ Q+   ++
Sbjct: 393 MIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWED 451

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLID 453
            L +  +M++ GF  + VT + +L++ ++L + + G+Q H+   + G   +  +ES LID
Sbjct: 452 ALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLID 511

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G ++ A ++FE     D D  +W AMI+GY Q+G+ ++A   FR+M      PN 
Sbjct: 512 MYAKCGSVRDAIKVFESLK--DPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNS 569

Query: 514 VTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            T   +L AC+  G ++ G +  H    RY L   +     ++D+  + G +  A     
Sbjct: 570 ATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIM 629

Query: 573 KIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY--AGL 629
           K+P E +   ++T++     HG  +  L+   + K     PD    + +LS  +Y  AG 
Sbjct: 630 KMPIEPDEKVWSTLLGACRVHGNIQ--LAKIAAQKVLSYNPDDFAALVLLSN-TYREAGN 686

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           ++ GL + ++M+ +   + +   + C+    G++ K     ++
Sbjct: 687 IEGGLNVRNMMKSQAMRKETGMSWICIG---GKIHKFCSGDQY 726


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/611 (33%), Positives = 340/611 (55%), Gaps = 40/611 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSA----DVVYGLLVKLGSEYVNDLFVASSAIFM 272
           ML  G   ++ + V+V  A+S L    +A       +   +K G  + +  F  ++ + M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 273 YAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
           YA LG    A+++F        +V  WNTM+   VQ+    EA++    ++ L  +  D 
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG-VRPDG 119

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVIVLNAVIER--------D 375
           VTF SAL A S+L+ LD+G+++HAY+IK+       FVA  ++ + A  E+        D
Sbjct: 120 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 179

Query: 376 VVS--------WNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRN 426
           +V         WN MI  + Q G+D+E L L   M+ + GF+    T+ ++L A +    
Sbjct: 180 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 239

Query: 427 QDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               +  H Y+++ G+     +++ L+DMYA+ G    AR+IF   D    D  +WN +I
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDL--PDVVSWNTLI 297

Query: 486 AGYTQNGLLEEAFVAFRQML---EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
            G    G + +AF   R+M    E  V PN +T+ ++LP C  +     GK++HG+++R+
Sbjct: 298 TGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH 357

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD +V VG++L+DMY+K G +  +  VF ++P +N++T+  +I+ YG HG+   A  LF
Sbjct: 358 ALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLF 417

Query: 603 RSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
             M   G   P+ +TF+A L+ACS++G+VD GLQ+F  M++++ ++P+ +   CV D+LG
Sbjct: 418 DRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILG 477

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G++ EAY  V  +      +  W ++LG+CRLH +  L E+  ++LLE++   +   +
Sbjct: 478 RAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEA--SH 535

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VLL NIY+  G W    +VR  MR RG+ KE GCSWI+V G ++RF + +  HP S ++
Sbjct: 536 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 595

Query: 782 YEMLERLAMEM 792
           +  +E L  EM
Sbjct: 596 HAHMEALWGEM 606



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 246/529 (46%), Gaps = 62/529 (11%)

Query: 96  MKKSSPYTSCDNYTYSSVLKAC----AETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLL 149
           +    P TS   +T  SVL+A     A    +R+G+  H   ++        RF +N+LL
Sbjct: 2   LAGGHPLTS---FTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALL 58

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD--TMRRRNVVAWNTIVSWYVKTERY 207
           +MY+      DA+                  ++F   T  R +VV WNT+VS  V++  +
Sbjct: 59  SMYARLGLVADAQ------------------RLFAGATPGRGDVVTWNTMVSVLVQSGMF 100

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
            EAV+    M+ +G+RP  ++F +  PA S L        ++  ++K   E   + FVAS
Sbjct: 101 DEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK-DDELAANSFVAS 159

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           + + MYA       AR++FD   +   ++  WN MI GY Q     EA+ LF ++     
Sbjct: 160 ALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAG 219

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER----------- 374
            V  + T  S L A ++ +     + +H Y++K  +A    V NA+++            
Sbjct: 220 FVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVAR 279

Query: 375 ---------DVVSWNTMISAFVQNGLDDEGLMLVYEMQK---QGFMIDSVTVTALLSAAS 422
                    DVVSWNT+I+  V  G   +   L  EMQ+    G + +++T+  LL   +
Sbjct: 280 RIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCA 339

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            L     GK+ H Y +RH +  +  + S L+DMYAK G +  +R +F++     R+  TW
Sbjct: 340 ILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPR--RNTITW 397

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQL-HGFS 539
           N +I  Y  +GL  EA V F +M       PN VT  + L AC+  G ++ G QL H   
Sbjct: 398 NVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAME 457

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVIN--YAANVFAKIPEKNSVTYTTMI 586
             + ++    +   ++D+  ++G ++  YA     +  E+    ++TM+
Sbjct: 458 RDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 212/460 (46%), Gaps = 55/460 (11%)

Query: 58  ARQLFDSIT--RPTTVIWNTIIIGFVCNNLPYEAI-LLYSQMKKSSPYTSCDNYTYSSVL 114
           A++LF   T  R   V WNT++   V + +  EA+  LY  +         D  T++S L
Sbjct: 70  AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALG---VRPDGVTFASAL 126

Query: 115 KACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
            AC+    L +G+ +H + I+      + FV ++L++MY+T       E VG        
Sbjct: 127 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYAT------HEQVGKAR----- 175

Query: 174 SKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                  +VFD +    + +  WN ++  Y +     EA+R F RM    G  P   +  
Sbjct: 176 -------QVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMA 228

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V PA +    +   + V+G +VK G     + FV ++ + MYA LG  D AR+IF    
Sbjct: 229 SVLPACARSEAFAGKEAVHGYVVKRG--MAGNRFVQNALMDMYARLGKTDVARRIFAMVD 286

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE--IVFDDVTFLSALSAVSQLQELDL 348
             +   WNT+I G V   H  +A +L  ++ +L+E  +V + +T ++ L   + L     
Sbjct: 287 LPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPAR 346

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G+++H Y +++ +   V V +A+++                    R+ ++WN +I A+  
Sbjct: 347 GKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGM 406

Query: 389 NGLDDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIH-FE 445
           +GL  E  +L   M   G    + VT  A L+A S+    D G Q  HA    HG+    
Sbjct: 407 HGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP 466

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            + + ++D+  ++G +  A  +    ++G++  + W+ M+
Sbjct: 467 DILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 25/255 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G+  +AR++F  +  P  V WNT+I G V      +A  L  +M++        N  T  
Sbjct: 273 GKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLM 332

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++L  CA       GK +H + +R   +    V ++L++MY+ C                
Sbjct: 333 TLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC---------------- 376

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
                 L   VFD + RRN + WN ++  Y       EA   F  M   G  RP+ ++F+
Sbjct: 377 --GCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 434

Query: 231 NVFPALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN- 288
               A S  G   +   + + +    G E   D+   +  + +    G  D A  +  + 
Sbjct: 435 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL--ACVVDILGRAGRLDEAYAMVTSM 492

Query: 289 -CLERNTEVWNTMIG 302
              E+    W+TM+G
Sbjct: 493 EAGEQQVSAWSTMLG 507


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 232/749 (30%), Positives = 381/749 (50%), Gaps = 53/749 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILL 92
           +P     +  + LS  C+ G    AR L   + R   V WNT+I     +     EA+ +
Sbjct: 69  LPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEM 128

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
           Y +M+      +  ++T +SVL AC     L  G+  H   ++   + ++FV N+LL MY
Sbjct: 129 YGRMRAEGLLPT--HFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMY 186

Query: 153 STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
           + C S  DA                   ++F  M R N V++  ++    +T    +A+R
Sbjct: 187 TKCGSVGDA------------------VRLFYGMARPNEVSFTAMMGGLAQTGSIDDALR 228

Query: 213 QFRMMLRMGI--RPSTISFVNVFPALSSLGDYKSA------DVVYGLLVKLGSEYVNDLF 264
            F  M R G+   P ++S V    A +   DY  A        ++ L+V+ G  + +D  
Sbjct: 229 LFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKG--FGSDQH 286

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V +S I MY +    D A K+F++        WN +I G+ Q     +A+E+ + +++  
Sbjct: 287 VGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV-LSLMQEA 345

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
               ++VT+ + L++  + +++   + +                + +    V +WNT++S
Sbjct: 346 GFEPNEVTYSNLLASCIKARDVHSARAM---------------FDKISRPSVTTWNTLLS 390

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            + Q     + + L   MQ Q    D  T+  +LS+ S L   D G+Q H+  +R  +H 
Sbjct: 391 GYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHN 450

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +  + S L+DMY+K G I  AR IF K    +RD   WN++I+G T + L +EAF  F+Q
Sbjct: 451 DMFVASGLVDMYSKCGQIGIARSIFNKMT--ERDVVCWNSIISGLTIHSLNKEAFDFFKQ 508

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M E+ + P   + AS++ +C+ + +I  G+Q+H   ++   DQNV+VG++LIDMY+K G 
Sbjct: 509 MRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGN 568

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ A   F  +  KN V +  MI GY Q+G+ ++A+ LF  M     +PDA+TF+AVL+ 
Sbjct: 569 MDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTG 628

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS++GLVD+ +  F+ M+  Y I P  EHY C+ D LGR G+ VE    + ++  + + +
Sbjct: 629 CSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPI 688

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            IW  LL +C +H ++EL +  A+ L  +D +N  P  +VLLSNIYA  G   +   VR 
Sbjct: 689 -IWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSP--YVLLSNIYASLGRHGDASAVRA 745

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKD 772
            M  RG+ K  G SWID    V  F   D
Sbjct: 746 LMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 208/599 (34%), Positives = 331/599 (55%), Gaps = 35/599 (5%)

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           RP   +F ++  A  S     SA  ++   ++LG    + +F + S +  Y   G    A
Sbjct: 67  RPDGFTFPSLIRAAPS---NASAAQLHACALRLGLVRPS-VFTSGSLVHAYLRFGRISEA 122

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K+FD   ER+   WN M+ G  +N    EA+ LF +++  + +  D VT  S L     
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVG-EGVAGDTVTVSSVLPMCVL 181

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
           L +  L   +H Y +K+ +   + V NA+I+                    RD+V+WN++
Sbjct: 182 LGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSI 241

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           IS   Q G     L +   M+  G   D +T+ +L SA +   +    K  H Y++R G 
Sbjct: 242 ISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGW 301

Query: 443 HFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
             + +   + ++DMYAK   I+ A+++F+      +D  +WN +I GY QNGL  EA   
Sbjct: 302 DVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPV--QDSVSWNTLITGYMQNGLANEAVER 359

Query: 501 FRQMLEHNVTPNVV-TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           +  M +H     +  T  SVLPA + +G ++ G ++H  SI+  L+ +V+VGT LID+Y+
Sbjct: 360 YGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYA 419

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G +  A  +F K+P +++  +  +I G G HG    AL+LF  M+  GI+PD +TFV+
Sbjct: 420 KCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVS 479

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +L+ACS+AGLVD+G   FD+MQ  Y I P  +HY C+ADMLGR G++ EA+ F++ +  +
Sbjct: 480 LLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIK 539

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            +   +WG+LLG+CR+HG+ E+ +V ++ L E+D  N   GY+VL+SN+YA+ G W+ VD
Sbjct: 540 PDS-AVWGALLGACRIHGNVEMGKVASQNLFELDPENV--GYYVLMSNMYAKVGKWDGVD 596

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE--HPQSHKIYEMLERLAMEMRNAG 796
           +VR  +R + L+K  G S I+V   VN F S +Q   HPQ  +I   L  L  ++R+ G
Sbjct: 597 EVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVG 655



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 166/616 (26%), Positives = 275/616 (44%), Gaps = 85/616 (13%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           NT+I  F    LP  A  L   +   +     D +T+ S+++A     N    +   C  
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPS--NASAAQLHACAL 94

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
                 PS F   SL++ Y                  + + +     KVFD M  R+V A
Sbjct: 95  RLGLVRPSVFTSGSLVHAY------------------LRFGRISEAYKVFDEMSERDVPA 136

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WN ++S   +  R  EAV  F  M+  G+   T++  +V P    LGD   A V++   V
Sbjct: 137 WNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAV 196

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K G +   +LFV ++ I +Y +LG  + A+ +F     R+   WN++I G  Q      A
Sbjct: 197 KHGLD--KELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAA 254

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVI 372
           +++F Q +    +  D +T +S  SA++Q  +    + LH Y++ + +    +I  NA++
Sbjct: 255 LKMF-QGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIV 313

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDS 411
           +                    +D VSWNT+I+ ++QNGL +E +     MQK +G     
Sbjct: 314 DMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQ 373

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK 470
            T  ++L A S+L     G + HA  ++ G++ +  + + LID+YAK G +  A  +FEK
Sbjct: 374 GTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEK 433

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
                R    WNA+I+G   +G   EA   F +M +  + P+ VT  S+L AC+  G   
Sbjct: 434 MPR--RSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG--- 488

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
                       L+DQ    G S  D+      + Y     AK        Y  M    G
Sbjct: 489 ------------LVDQ----GRSFFDVMQ----VTYDIVPIAK-------HYACMADMLG 521

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP-S 649
           + G  + A +  ++M    I+PD+  + A+L AC   G V+ G       Q  +++ P +
Sbjct: 522 RAGQLDEAFNFIQNMP---IKPDSAVWGALLGACRIHGNVEMGKVA---SQNLFELDPEN 575

Query: 650 TEHYCCVADMLGRVGK 665
             +Y  +++M  +VGK
Sbjct: 576 VGYYVLMSNMYAKVGK 591



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 251/573 (43%), Gaps = 78/573 (13%)

Query: 12  PPPPTATPPPPQLPQIHSLSPPIPKLKTP--TIRSRLSKICQEGRPHLARQLFDSITRPT 69
           P    A P      Q+H+ +  +  ++    T  S +    + GR   A ++FD ++   
Sbjct: 74  PSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERD 133

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
              WN ++ G   N    EA+ L+ +M       + D  T SSVL  C    +  +   +
Sbjct: 134 VPAWNAMLSGLCRNARAAEAVGLFGRMVGEG--VAGDTVTVSSVLPMCVLLGDQVLALVM 191

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           H + ++   +   FV N+L+++Y   L  L+                     VF  M  R
Sbjct: 192 HVYAVKHGLDKELFVCNALIDVYGK-LGMLEEAQC-----------------VFHGMECR 233

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           ++V WN+I+S   +  +   A++ F+ M   G+ P  ++ V++  A++  GD +SA  ++
Sbjct: 234 DLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLH 293

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             +++ G + V+D+   ++ + MYA+L   + A+++FD+   +++  WNT+I GY+QN  
Sbjct: 294 CYVMRRGWD-VDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGL 352

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+E +  + + + +     TF+S L A S L  L  G ++HA  IK  + + V V  
Sbjct: 353 ANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGT 412

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            +I+                    R    WN +IS    +G   E L L   MQ++G   
Sbjct: 413 CLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKP 472

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D VT  +LL+A S           HA L+  G       S+   M     ++  A+    
Sbjct: 473 DHVTFVSLLAACS-----------HAGLVDQG------RSFFDVMQVTYDIVPIAKH--- 512

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                      +  M     + G L+EAF   + M    + P+     ++L AC   GN+
Sbjct: 513 -----------YACMADMLGRAGQLDEAFNFIQNM---PIKPDSAVWGALLGACRIHGNV 558

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           E+GK +   ++  L  +NV     + +MY+K G
Sbjct: 559 EMGK-VASQNLFELDPENVGYYVLMSNMYAKVG 590


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 322/572 (56%), Gaps = 32/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  L+ LG ++    F+ +  I   +  G   FAR++FD+        WN +I GY +N
Sbjct: 40  IHARLLVLGLQFSG--FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           NH  +A+ ++   ++L  +  D  TF   L A S L  L +G+ +HA + +      V V
Sbjct: 98  NHFQDALLMYSN-MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 368 LNAVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            N +I                      ER +VSW  ++SA+ QNG   E L +  +M+K 
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
               D V + ++L+A + L++   G+  HA +++ G+  E  +   L  MYAK G + TA
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           + +F+K  S +     WNAMI+GY +NG   EA   F +M+  +V P+ ++I S + AC 
Sbjct: 277 KILFDKMKSPN--LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G++E  + ++ +  R     +VF+ ++LIDM++K G +  A  VF +  +++ V ++ 
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI+GYG HG +  A+SL+R+M+  G+ P+ +TF+ +L AC+++G+V EG   F+ M  ++
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADH 453

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           KI P  +HY CV D+LGR G + +AYE +K +  +  V  +WG+LL +C+ H H EL E 
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV-TVWGALLSACKKHRHVELGEY 512

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A++L  +D  N+  G++V LSN+YA    W+ V +VR  M+E+GL K+VGCSW++V G 
Sbjct: 513 AAQQLFSIDPSNT--GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +  F   D+ HP+  +I   +E +   ++  G
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 251/549 (45%), Gaps = 91/549 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
            ARQ+FD + RP    WN II G+  NN   +A+L+YS M+ +    S D++T+  +LKA
Sbjct: 71  FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKA 128

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSLDAEMVGLKYVEVDYS 174
           C+   +L++G+ VH    R   +   FV N L+ +Y+ C  L S      GL   E    
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE---- 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                         R +V+W  IVS Y +    +EA+  F  M +M ++P  ++ V+V  
Sbjct: 185 --------------RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L D K    ++  +VK+G E   DL ++ +   MYA+ G    A+ +FD     N 
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT--MYAKCGQVATAKILFDKMKSPNL 288

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +WN MI GY +N +  EAI++F +++  D +  D ++  SA+SA +Q+  L+  + ++ 
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347

Query: 355 YIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y+ ++      F++  +I              V +  ++RDVV W+ MI  +  +G   E
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
            + L   M++ G   + VT   LL A +           H+ ++R G   F  M  + I 
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGWWFFNRMADHKI- 455

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
                                +  Q  +  +I    + G L++A+   + M    V P V
Sbjct: 456 ---------------------NPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGV 491

Query: 514 VTIASVLPACNPMGNIELG----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
               ++L AC    ++ELG    +QL  FSI      N      L ++Y+ + + +  A 
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQL--FSID---PSNTGHYVQLSNLYAAARLWDRVAE 546

Query: 570 VFAKIPEKN 578
           V  ++ EK 
Sbjct: 547 VRVRMKEKG 555



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 24/313 (7%)

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
           +IDS T  A L            KQ HA LL  G+ F G + + LI   +  G I  ARQ
Sbjct: 27  LIDSATHKAQL------------KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74

Query: 467 IFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           +F   D   R Q   WNA+I GY++N   ++A + +  M    V+P+  T   +L AC+ 
Sbjct: 75  VF---DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK--IPEKNSVTYT 583
           + ++++G+ +H    R   D +VFV   LI +Y+K   +  A  VF    +PE+  V++T
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQ 642
            ++  Y Q+G    AL +F  M+   ++PD +  V+VL+A +    + +G  I   +++ 
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +I+P       +  M  + G+V  A     ++     +L  W +++     +G++  A
Sbjct: 252 GLEIEPDL--LISLNTMYAKCGQVATAKILFDKMKSPNLIL--WNAMISGYAKNGYAREA 307

Query: 703 EVVAKKLLEMDTR 715
             +  +++  D R
Sbjct: 308 IDMFHEMINKDVR 320



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
           G+   A+ LFD +  P  ++WN +I G+  N    EAI ++ +M  K   P    D  + 
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP----DTISI 326

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +S + ACA+  +L   ++++ +  R       F+ ++L++M++ C S   A +       
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------- 379

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      VFD    R+VV W+ ++  Y    R  EA+  +R M R G+ P+ ++F+
Sbjct: 380 -----------VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428

Query: 231 NVFPALSSLG 240
            +  A +  G
Sbjct: 429 GLLMACNHSG 438


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 216/677 (31%), Positives = 363/677 (53%), Gaps = 52/677 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y S+LK     ++L   K +H H I      S  + + L+  Y+ C    +A        
Sbjct: 24  YQSLLKHYGAAQSLTSTKQLHAHLITS-GLLSIDIRSVLVATYAHCGYVHNAR------- 75

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML-RMGIRPSTIS 228
                      K+FD +R+R  + +N ++  Y+    Y EA++ F  ML      P   +
Sbjct: 76  -----------KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYT 124

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +  V  A S L   +   V++GL   L S++ + LFV +S + MY   G  + ARK+FD 
Sbjct: 125 YPFVIKACSELLLVEYGRVLHGL--TLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDA 182

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             E++   WNTMI GY +N     A+ +F Q+++   +  D  + +S L A   L+EL++
Sbjct: 183 MKEKSVVSWNTMINGYFKNGFANTALVVFNQMVD-SGVEIDGASVVSVLPACGYLKELEV 241

Query: 349 GQQLHAYIIKNFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQN 389
           G+++H  + +  +   ++                   V + ++ERDVVSW +MI+ ++ N
Sbjct: 242 GRRVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILN 301

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G     L L   MQ +G   +SVT+  +L A ++L N   G+  H ++++  ++ E  +E
Sbjct: 302 GDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVE 361

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LIDMYAK   +  +  +F +  +  +    WNA+++G   N L  EA   F++ML   
Sbjct: 362 TSLIDMYAKCNCLGLSFSVFTR--TSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEG 419

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V  N  T  S+LPA   + +++    ++ + +R     N+ V TSLID+YSK G +  A 
Sbjct: 420 VEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAH 479

Query: 569 NVFAKIPE--KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
            +F  IP   ++   ++ +I GYG HG  E A+SLF+ M   G++P+ +TF +VL +CS+
Sbjct: 480 KIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSH 539

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEI 685
           AG+VD+GL +F  M ++++  P+ +HY C+ D+LGR G++ EAY+ +K +    G+   +
Sbjct: 540 AGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHA--V 597

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LLG+C +H + EL EV A+ L E++  N+  G +VLL+ +YA  G WE+ + VR+ M
Sbjct: 598 WGALLGACVMHENVELGEVAARWLFELEPGNT--GNYVLLAKLYAALGRWEDAENVRQRM 655

Query: 746 RERGLRKEVGCSWIDVG 762
            + GLRK    S I+ G
Sbjct: 656 DDIGLRKAPAHSLIEAG 672



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 165/562 (29%), Positives = 274/562 (48%), Gaps = 56/562 (9%)

Query: 42  IRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           IRS L +     G  H AR+LFD + +  T+++N +I  ++     +EA+ ++ +M  S 
Sbjct: 57  IRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSK 116

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
                DNYTY  V+KAC+E   +  G+ +H   +        FV NSLL MY  C     
Sbjct: 117 DCCP-DNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNC----- 170

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                    EV+ ++     KVFD M+ ++VV+WNT+++ Y K      A+  F  M+  
Sbjct: 171 --------GEVEEAR-----KVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDS 217

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGC 278
           G+     S V+V PA   L + +    V+GL+ +  LG + V++  V      MYA+ G 
Sbjct: 218 GVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSNALVD-----MYAKCGS 272

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D AR +FDN +ER+   W +MI GY+ N     A+ LF ++++++ +  + VT    L 
Sbjct: 273 MDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLF-KIMQIEGLRPNSVTIALILL 331

Query: 339 AVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVS 378
           A + L  L  G+ LH +++K                    N + L   V      +  V 
Sbjct: 332 ACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVP 391

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN ++S  V N L  E + L  +M  +G  I++ T  +LL A   L +       ++YL+
Sbjct: 392 WNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLM 451

Query: 439 RHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           R G +    + + LID+Y+K G +++A +IF       +D   W+ +IAGY  +G  E A
Sbjct: 452 RSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETA 511

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG----TS 553
              F+QM++  V PN VT  SVL +C+  G ++ G  L  F ++   D          T 
Sbjct: 512 VSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK---DHQTIPNDDHYTC 568

Query: 554 LIDMYSKSGVINYAANVFAKIP 575
           ++D+  ++G ++ A ++   +P
Sbjct: 569 MVDLLGRAGRMDEAYDLIKTMP 590



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 230/507 (45%), Gaps = 51/507 (10%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S L+     G    AR++FD++   + V WNT+I G+  N     A+++++QM  S  
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSG- 218

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D  +  SVL AC   + L +G+ VH   +       + V N+L++MY+ C S  +A
Sbjct: 219 -VEIDGASVVSVLPACGYLKELEVGRRVH-GLVEEKVLGKKIVSNALVDMYAKCGSMDEA 276

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            +                  VFD M  R+VV+W ++++ Y+       A+  F++M   G
Sbjct: 277 RL------------------VFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEG 318

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP++++   +  A +SL + K    ++G ++K      +++ V +S I MYA+  C   
Sbjct: 319 LRPNSVTIALILLACASLNNLKDGRCLHGWVMK--QRLYSEVAVETSLIDMYAKCNCLGL 376

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           +  +F     + T  WN ++ G V N    EAI LF ++L ++ +  +  T  S L A  
Sbjct: 377 SFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKML-MEGVEINAATCNSLLPAYG 435

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSW 379
            L +L     +++Y++++     + V  ++I+                      +D+  W
Sbjct: 436 ILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVW 495

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           + +I+ +  +G  +  + L  +M + G   + VT T++L + S+    D G     ++L+
Sbjct: 496 SIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK 555

Query: 440 HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                   + Y  ++D+  ++G +  A  +  K        A W A++     +  +E  
Sbjct: 556 DHQTIPNDDHYTCMVDLLGRAGRMDEAYDLI-KTMPFMPGHAVWGALLGACVMHENVELG 614

Query: 498 FVAFRQM--LEHNVTPNVVTIASVLPA 522
            VA R +  LE   T N V +A +  A
Sbjct: 615 EVAARWLFELEPGNTGNYVLLAKLYAA 641


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/678 (29%), Positives = 364/678 (53%), Gaps = 38/678 (5%)

Query: 147 SLLNMYSTCL-SSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYV 202
           S+  ++S CL + L  +   +  + V Y++Y  +    K+F     R V  WN ++  Y 
Sbjct: 154 SISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYC 213

Query: 203 KTERYVEAVRQFRMM-----LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
               +VE +  FR M     + +  RP   S      + + L       V++G L K+  
Sbjct: 214 FEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRI 273

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           +   D+FV S+ I +Y + G  + A K+F    + +  +W ++I GY Q+  P  A+  F
Sbjct: 274 D--GDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 331

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
            +++  +++  D VT +S  SA +QL    LG+ +H ++ +  +   + + N+++     
Sbjct: 332 SRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGK 391

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                          ++D++SW+TM++ +  NG + + L L  EM  +    + VTV ++
Sbjct: 392 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 451

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L A + + N + G + H   + +G   E  + + L+DMY K    + A  +F  N    +
Sbjct: 452 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLF--NRMPKK 509

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D   W  + +GY  NG++ E+   FR ML     P+ + +  +L   + +G ++    LH
Sbjct: 510 DVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLH 569

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            F I+   + N F+G SLI++Y+K   I  A  VF  +  K+ VT++++I  YG HG  E
Sbjct: 570 AFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGE 629

Query: 597 RALSLFRSMKG-CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
            AL LF  M      +P+ +TF+++LSACS++GL+ EG+ +FD+M  +YK++P++EHY  
Sbjct: 630 EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAI 689

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           + D+LGR+G++  A + +  +  +    +IWG+LLG+CR+H + ++ EV AK L  +D  
Sbjct: 690 MVDLLGRMGELDMALDVINNMPMQAGP-DIWGALLGACRIHQNIKMGEVAAKNLFSLDPN 748

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           ++  GY++LLSNIY+ + NW +  K+R+ ++E+ L K VG S +++   V  F + D+ H
Sbjct: 749 HA--GYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIH 806

Query: 776 PQSHKIYEMLERLAMEMR 793
            +S  IYE+L +L  +MR
Sbjct: 807 DESDHIYEILTKLHAKMR 824



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 260/562 (46%), Gaps = 54/562 (9%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT---SCDNYTYSS 112
           H A +LF      T  +WN ++  +       E + L+ QM   S  +     DNY+ S 
Sbjct: 188 HHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSI 247

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            LK+CA  R L +GK +H    +   +   FV ++L+++Y+ C    DA           
Sbjct: 248 ALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDA----------- 296

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVN 231
                   KVF    + +VV W +I+S Y ++     A+  F RM++   + P  ++ V+
Sbjct: 297 -------VKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVS 349

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A + L ++K    V+G + + G +  N L +A+S + +Y + G    A  +F    +
Sbjct: 350 VASACAQLSNFKLGRSVHGFVKRKGLD--NKLCLANSLLHLYGKTGSIKNASNLFREMSD 407

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++   W+TM+  Y  N    + ++LF ++L+   I  + VT +S L A + +  L+ G +
Sbjct: 408 KDIISWSTMVACYADNGAETDVLDLFNEMLD-KRIKPNWVTVVSVLRACACISNLEEGMK 466

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H   +     +   V  A+++                    +DV++W  + S +  NG+
Sbjct: 467 IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGM 526

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--- 448
             E + +   M   G   D++ +  +L+  S L         HA+++++G  FE  +   
Sbjct: 527 VHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG--FENNQFIG 584

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI++YAK   I+ A ++F+      +D  TW+++IA Y  +G  EEA   F QM  H+
Sbjct: 585 ASLIEVYAKCSSIEDANKVFKGMTY--KDVVTWSSIIAAYGFHGQGEEALKLFYQMANHS 642

Query: 509 VT-PNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINY 566
            T PN VT  S+L AC+  G I+ G  +    + +Y L  N      ++D+  + G ++ 
Sbjct: 643 DTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDM 702

Query: 567 AANVFAKIPEKNSVTYTTMILG 588
           A +V   +P +        +LG
Sbjct: 703 ALDVINNMPMQAGPDIWGALLG 724



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/256 (21%), Positives = 110/256 (42%), Gaps = 33/256 (12%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  A  LF+ + +   + W  +  G+  N + +E++ ++  M  S   T  D      +L
Sbjct: 496 PEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSG--TRPDAIALVKIL 553

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
              +E   L+    +H   I+     ++F+  SL+ +Y+ C S  DA             
Sbjct: 554 TTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDAN------------ 601

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVF 233
                 KVF  M  ++VV W++I++ Y    +  EA++ F  M      +P+ ++F+++ 
Sbjct: 602 ------KVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISIL 655

Query: 234 PALSSLGDYKSADVVYGLLV-----KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            A S  G  K    ++ ++V     K  SE+       +  + +   +G  D A  + +N
Sbjct: 656 SACSHSGLIKEGINMFDIMVNKYKLKPNSEHY------AIMVDLLGRMGELDMALDVINN 709

Query: 289 C-LERNTEVWNTMIGG 303
             ++   ++W  ++G 
Sbjct: 710 MPMQAGPDIWGALLGA 725


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 219/712 (30%), Positives = 367/712 (51%), Gaps = 50/712 (7%)

Query: 106  DNYTYSSVLKACAETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            D ++ S V+    +  N R   GK +H + +R   +   F+  +L++MY     S DA  
Sbjct: 666  DAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWR 725

Query: 164  VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
            V   +VE++               + NVV WN ++  +  +E    ++  + +     ++
Sbjct: 726  V---FVEIE--------------DKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVK 768

Query: 224  PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
              + SF     A S   +      ++  +VK+G +  ND +V++S + MY++ G    A 
Sbjct: 769  LVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLD--NDPYVSTSLLSMYSKCGMVGEAE 826

Query: 284  KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
             +F   +++  E+WN M+  YV+N++   A+ELF   +    ++ D  T  + +S  S  
Sbjct: 827  TVFSCVVDKRLEIWNAMVAAYVENDNGYSALELF-GFMRQKSVLPDSFTLSNVISCCSMF 885

Query: 344  QELDLGQQLHAYIIKNFV-ALPVI-------------------VLNAVIERDVVSWNTMI 383
               D G+ +HA + K  + + P I                   V  ++ E+D+V+W ++I
Sbjct: 886  GLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLI 945

Query: 384  SAFVQNGLDDEGLMLVYEMQKQ--GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            S   +NG   E L +  +M+        DS  +T++++A + L     G Q H  +++ G
Sbjct: 946  SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTG 1005

Query: 442  -IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
             +    + S LID+Y+K GL + A ++F        +   WN+MI+ Y++N L E +   
Sbjct: 1006 QVLNVFVGSSLIDLYSKCGLPEMALKVF--TSMRPENIVAWNSMISCYSRNNLPELSIEL 1063

Query: 501  FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
            F  ML   + P+ V+I SVL A +   ++  GK LHG+++R  +  +  +  +LIDMY K
Sbjct: 1064 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 1123

Query: 561  SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
             G   YA N+F K+  K+ +T+  MI GYG HG    ALSLF  +K  G  PD +TF+++
Sbjct: 1124 CGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSL 1183

Query: 621  LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            +SAC+++G V+EG   F++M+Q+Y I+P  EHY  + D+LGR G++ EAY F+K +  E 
Sbjct: 1184 ISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEA 1243

Query: 681  NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
            +   IW  LL + R H + EL  + A+KLL M+        +V L N+Y E G      K
Sbjct: 1244 DS-SIWLCLLSASRTHHNVELGILSAEKLLRMEPERG--STYVQLINLYMEAGLKNEAAK 1300

Query: 741  VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
            +  EM+ERGL+K+ GCSWI+V    N F S     P   +I+++L RL   M
Sbjct: 1301 LLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNM 1352



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 297/630 (47%), Gaps = 71/630 (11%)

Query: 36   KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
            KL    IR RLS+            L DS   P +V  N+ I   +      +A+ LY++
Sbjct: 505  KLHDVHIRRRLSR------------LADSYISPASV--NSGIRALIQKGEYLQALHLYTK 550

Query: 96   MKKSSP-YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
               SSP +TS   +T+ S+LKAC+   NL  GK +H   I        F+  SL+NMY  
Sbjct: 551  HDGSSPLWTSV--FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVK 608

Query: 155  CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR-----RNVVAWNTIVSWYVKTERYVE 209
            C                     D   +VFD   +     R+V   N+++  Y K  R+ E
Sbjct: 609  C------------------GFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKE 650

Query: 210  AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD--VVYGLLVKLGSEYVNDLFVAS 267
             V  FR ML +G+RP   S   V   L   G+++  D   ++G +++  +    D F+ +
Sbjct: 651  GVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLR--NSLDGDSFLKT 708

Query: 268  SAIFMYAELGCFDFARKIFDNCLER-NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
            + I MY + G    A ++F    ++ N  +WN MI G+  +     ++EL++ + + + +
Sbjct: 709  ALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYM-LAKSNSV 767

Query: 327  VFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALPVI 366
                 +F  AL A SQ +    G+Q+H  ++K                      V     
Sbjct: 768  KLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAET 827

Query: 367  VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
            V + V+++ +  WN M++A+V+N      L L   M+++  + DS T++ ++S  S    
Sbjct: 828  VFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGL 887

Query: 427  QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
             D GK  HA L +  I     +ES L+ +Y+K G    A  +F+  +  ++D   W ++I
Sbjct: 888  YDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSME--EKDMVAWGSLI 945

Query: 486  AGYTQNGLLEEAFVAFRQMLEHN--VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
            +G  +NG  +EA   F  M + +  + P+   + SV+ AC  +  +  G Q+HG  I+  
Sbjct: 946  SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTG 1005

Query: 544  LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
               NVFVG+SLID+YSK G+   A  VF  +  +N V + +MI  Y ++ + E ++ LF 
Sbjct: 1006 QVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFN 1065

Query: 604  SMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
             M   GI PD+++  +VL A S    + +G
Sbjct: 1066 LMLSQGIFPDSVSITSVLVAISSTASLLKG 1095



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/492 (26%), Positives = 215/492 (43%), Gaps = 45/492 (9%)

Query: 35   PKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
            P   TP I S L  +  + G    A  +F S+     V W ++I G   N    EA+ ++
Sbjct: 902  PIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 961

Query: 94   SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
              MK        D+   +SV+ ACA    L  G  VH   I+     + FV +SL+++YS
Sbjct: 962  GDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYS 1021

Query: 154  TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
             C         GL          ++  KVF +MR  N+VAWN+++S Y +      ++  
Sbjct: 1022 KC---------GLP---------EMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIEL 1063

Query: 214  FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
            F +ML  GI P ++S  +V  A+SS         ++G  ++LG    +D  + ++ I MY
Sbjct: 1064 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG--IPSDTHLKNALIDMY 1121

Query: 274  AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
             + G   +A  IF     ++   WN MI GY  +     A+ LF ++ +  E   DDVTF
Sbjct: 1122 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETP-DDVTF 1180

Query: 334  LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
            LS +SA +    ++ G        KNF    ++  +  IE  +  +  M+    + G  +
Sbjct: 1181 LSLISACNHSGFVEEG--------KNF--FEIMKQDYGIEPKMEHYANMVDLLGRAGRLE 1230

Query: 394  EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
            E    +  M  +    DS     LLSA+    N ++G  +   LLR           LI+
Sbjct: 1231 EAYSFIKAMPTEA---DSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLIN 1287

Query: 454  MYAKSGLIKTARQIF-EKNDSGDRDQ--ATW-------NAMIAGYTQNGLLEEAFVAFRQ 503
            +Y ++GL   A ++  E  + G + Q   +W       N   +G + + +  E F    +
Sbjct: 1288 LYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNR 1347

Query: 504  MLEHNVTPNVVT 515
            +  + VT +  T
Sbjct: 1348 LKSNMVTEDKAT 1359



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 19/236 (8%)

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHN----VTPNVVTIASVLPACNPMGNIELGKQ 534
           A+ N+ I    Q G   E   A     +H+    +  +V T  S+L AC+ + N+  GK 
Sbjct: 526 ASVNSGIRALIQKG---EYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKT 582

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF-----AKIPEKNSVTYTTMILGY 589
           +HG  I      + F+ TSL++MY K G ++YA  VF     + +  ++     +MI GY
Sbjct: 583 IHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGY 642

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV--DEGLQIFDLMQQEYKIQ 647
            +    +  +  FR M   G+ PDA +   V+S     G    ++G QI   M +   + 
Sbjct: 643 FKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRN-SLD 701

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
             +     + DM  + G   +A+    E+ ++ NV+ +W  ++      G SE+ E
Sbjct: 702 GDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVV-LWNVMIVG---FGGSEICE 753


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 202/603 (33%), Positives = 338/603 (56%), Gaps = 33/603 (5%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           R     WNT++  Y         +  +  M+R+G+RP   +F  V  A +   + +    
Sbjct: 4   RTTAFLWNTLIRGY-SIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGRE 62

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+G +VKLG E  +D+FV ++ +  Y   G    A ++FD   E++   WNTMIG +  N
Sbjct: 63  VHGSVVKLGFE--SDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVN 120

Query: 308 N-HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
             H  +A+++F  +++ + +  + +T  S L  + +L+    G+++H   I+  +   + 
Sbjct: 121 GWHYRDALDMFRLMID-EGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIF 179

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           + N++I+                    ++VVSWN MI+ F QN  +   + LV +MQ  G
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYG 239

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
            + +SVT T +L A + +     GK+ HA  +  G  F+  + + L DMYAKSG +K AR
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLAR 299

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F   D+  RD+ ++N +I G++Q     E+   F +M    +  + V+    L AC  
Sbjct: 300 NVF---DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACAN 356

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  I+ GK++HGF +R L   ++FV  SL+D Y+K G I  A N+F ++  K+  ++ TM
Sbjct: 357 LTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTM 416

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           ILGYG  G  + A+ LF +M+   +E D+++F+AVLSACS+ GL+++G + FD ++    
Sbjct: 417 ILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-G 475

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I+P+  HY C+ D+LGR G + EA E +K L    +   IWG+LLG+CR++G+ ELA   
Sbjct: 476 IEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDA-NIWGALLGACRIYGNLELAAWA 534

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ L E+   +S  GY+ LLSN+YAE G W+  +++R+ M+ RG++K  GCSW+ +G   
Sbjct: 535 AEHLFELKPEHS--GYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQA 592

Query: 766 NRF 768
           + F
Sbjct: 593 HAF 595



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 180/632 (28%), Positives = 296/632 (46%), Gaps = 86/632 (13%)

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           R T  +WNT+I G+    +    + +Y+QM +       D++T+  VLKACA+   +R G
Sbjct: 4   RTTAFLWNTLIRGYSIAGVG-GGLEVYNQMVRIG--VRPDDHTFPFVLKACADAFEVRKG 60

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           + VH   ++       FV N+LL+ Y  C    DA                   +VFD M
Sbjct: 61  REVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDA------------------GRVFDEM 102

Query: 187 RRRNVVAWNTIVSWY-VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
             +++V+WNT++  + V    Y +A+  FR+M+  G++P++I+  +  P L  L  +K+ 
Sbjct: 103 PEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAG 162

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             V+G  +++G E  +D+F+A+S I MYA+ G    A  +F     +N   WN MI  + 
Sbjct: 163 REVHGSSIRMGLE--SDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFA 220

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           QN   + A+ L  Q+ +  E+  + VTF + L A +++  +  G+++HA  I    A  +
Sbjct: 221 QNRFELVAVGLVRQMQDYGELP-NSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDL 279

Query: 366 IVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
            V NA+ +                   RD VS+N +I    Q     E L L  EMQ  G
Sbjct: 280 FVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMG 339

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              D+V+    LSA +NL     GK+ H +LLR   H    + + L+D Y K G I  AR
Sbjct: 340 LKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLAR 399

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            IF++    ++D A+WN MI GY   G L+ A   F  M + +V  + V+  +VL AC+ 
Sbjct: 400 NIFDRMT--NKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSH 457

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
            G +E G++                               Y   + A+  E   + Y  M
Sbjct: 458 GGLLEKGRK-------------------------------YFDELKARGIEPTQMHYACM 486

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           +   G+ G+ E A  L   +KG  I PDA  + A+L AC   G ++         +  ++
Sbjct: 487 VDLLGRAGLMEEAAEL---IKGLPIVPDANIWGALLGACRIYGNLELAAWA---AEHLFE 540

Query: 646 IQPS-TEHYCCVADMLGRVGKVVEAYEFVKEL 676
           ++P  + +Y  +++M    G+  EA   ++EL
Sbjct: 541 LKPEHSGYYTLLSNMYAETGRWDEANR-IREL 571



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 220/471 (46%), Gaps = 47/471 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPY-EAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A ++FD +     V WNT+I  F  N   Y +A+ ++  M         ++ T SS L  
Sbjct: 95  AGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEG--LKPNSITISSFLPV 152

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
             E    + G+ VH   IR       F+ NSL++MY+    S +A               
Sbjct: 153 LVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEAS-------------- 198

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                VF  +  +NVV+WN +++ + +    + AV   R M   G  P++++F NV PA 
Sbjct: 199 ----NVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPAC 254

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + +G  +    ++   + +G  +  DLFV+++   MYA+ G    AR +FD  L R+   
Sbjct: 255 ARMGLVRPGKEIHARSIHMGCAF--DLFVSNALTDMYAKSGHLKLARNVFDTSL-RDEVS 311

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +N +I G+ Q +   E++ LF + ++L  +  D+V+F+ ALSA + L  +  G+++H ++
Sbjct: 312 YNILIVGHSQTSDCSESLSLFSE-MQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFL 370

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           ++    + + V N++++                    +DV SWNTMI  +   G  D  +
Sbjct: 371 LRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAI 430

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMY 455
            L   M+K     DSV+  A+LSA S+    + G++    L   GI    M  + ++D+ 
Sbjct: 431 DLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLL 490

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++GL++ A ++  K      D   W A++      G LE A  A   + E
Sbjct: 491 GRAGLMEEAAELI-KGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFE 540



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 180/422 (42%), Gaps = 42/422 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
            + G    A  +F  +     V WN +I  F  N     A+ L  QM+        ++ T
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELP--NSVT 246

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +++VL ACA    +R GK +H   I        FV N+L +MY+                
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKS-------------- 292

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                   L   VFDT   R+ V++N ++  + +T    E++  F  M  MG++   +SF
Sbjct: 293 ----GHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSF 347

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +    A ++L   K    ++G L++    +   LFVA+S +  Y + G    AR IFD  
Sbjct: 348 MGALSACANLTAIKQGKEIHGFLLR--KLFHIHLFVANSLLDFYTKCGRIGLARNIFDRM 405

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   WNTMI GY        AI+LF + +  D++ +D V+F++ LSA S    L+ G
Sbjct: 406 TNKDVASWNTMILGYGMLGELDTAIDLF-ENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           +       K F  L        IE   + +  M+    + GL +E   L+     +G  I
Sbjct: 465 R-------KYFDELKA----RGIEPTQMHYACMVDLLGRAGLMEEAAELI-----KGLPI 508

Query: 410 --DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
             D+    ALL A     N ++      +L        G  + L +MYA++G    A +I
Sbjct: 509 VPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRI 568

Query: 468 FE 469
            E
Sbjct: 569 RE 570



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 25/193 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  LAR +FD +T      WNT+I+G+        AI L+  M+K       D+ ++ +
Sbjct: 393 GRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDD--VEYDSVSFIA 450

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC-LSSLDAEMVGLKYVEV 171
           VL AC+    L  G+            P++  Y  ++++     L    AE++    +  
Sbjct: 451 VLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVP 510

Query: 172 DYSKYDLV---CKVFDTMRRRNVVAW----------------NTIVSWYVKTERYVEAVR 212
           D + +  +   C+++  +    + AW                  + + Y +T R+ EA R
Sbjct: 511 DANIWGALLGACRIYGNLE---LAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANR 567

Query: 213 QFRMMLRMGIRPS 225
              +M   G++ S
Sbjct: 568 IRELMKSRGVKKS 580


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 237/838 (28%), Positives = 406/838 (48%), Gaps = 115/838 (13%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           +L+     +R+  + + GR   AR++FD++ R   + WN++I  +  N +P  A  LY  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIG-----KAVHCHFIRCF------------- 137
           +   +  T     +    L    E R +  G            I C+             
Sbjct: 91  ISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLF 150

Query: 138 -SNPSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
            + PSR V  +NS+L  Y   L  +DA                    +F+ M  RN+V+W
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDAR------------------NLFEKMPERNLVSW 192

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
             ++S Y + E + +A   F  M R G+ P   +F +   A+  LG+    + +  L +K
Sbjct: 193 TVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALK 252

Query: 255 LGSEYVNDLFVASSAIFMYA-ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
            G E   D+ + ++ + +Y+ +    D A K F++ +ERN   W+TMI            
Sbjct: 253 TGFE--RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR---- 306

Query: 314 IELFVQVLELDEIVFDDVTFLSAL-SAVSQLQELDLGQQLHAYIIKNFVALPVIV-LNAV 371
           I+  + V E D +    +   +AL + ++Q   +D      A I+   +  P++V  NA+
Sbjct: 307 IDAAIAVYERDPV--KSIACRTALITGLAQCGRID-----DARILFEQIPEPIVVSWNAL 359

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           I                     R+ +SW  MI+ + QNG  +E L L+ E+ + G +   
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEK 470
            ++T++  A SN+   + G Q H+  ++ G  F     + LI MY K   ++ ARQ+F +
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML------------------------- 505
             +  +D  +WN+ +A   QN LL+EA   F  ML                         
Sbjct: 480 MVT--KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537

Query: 506 -------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
                  EH + PN   +  +L  C  +G  ++G+Q+H  +I+  +D  + V  +LI MY
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            K G  + +  +F  + E++  T+ T+I GY QHG+   A+ +++ M+  G+ P+ +TFV
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            +L+ACS+AGLVDEG + F  M Q+Y + P  EHY C+ D+LGR G V  A +F+ ++  
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           E + + IW +LLG+C++H ++E+ +  A+KL  ++  N+  G +V+LSNIY+  G W  V
Sbjct: 716 EPDTV-IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNA--GNYVMLSNIYSSLGMWGEV 772

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +VRK M+++G+ KE GCSW  +   ++ F + D++H Q  +I   LE L   ++  G
Sbjct: 773 AEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 165/708 (23%), Positives = 287/708 (40%), Gaps = 133/708 (18%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  S L+  C   +   AR LF+ +     V W  +I G+       +A
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
             ++ +M +       D   ++S L A     NL + +++    ++        +  ++L
Sbjct: 209 WDIFCKMHREGLLP--DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAIL 266

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           N+YS                  D S  D   K F++M  RN   W+T+++      R   
Sbjct: 267 NVYSR-----------------DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 210 AVRQFRM--MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           A+  +    +  +  R + I+       L+  G    A +++        E + +  V S
Sbjct: 310 AIAVYERDPVKSIACRTALIT------GLAQCGRIDDARILF--------EQIPEPIVVS 355

Query: 268 --SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
             + I  Y + G  + A+++FD    RNT  W  MI GY QN    EA+ L +Q L    
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL-LQELHRSG 414

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------------- 366
           ++    +  S   A S +  L+ G Q+H+  +K      +F    +I             
Sbjct: 415 MLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYAR 474

Query: 367 -VLNAVIERDVVSWNTMISAFVQNGLDDEG-----------------LMLVYEMQKQGF- 407
            V + ++ +D+VSWN+ ++A VQN L DE                  ++  Y   +Q   
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534

Query: 408 -------------MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
                        + +S  +T LL    +L    +G+Q H   ++ G+  E +  + LI 
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G   + R+IF+  +  +RD  TWN +I GY Q+GL  EA   ++ M    V PN 
Sbjct: 595 MYFKCGCADS-RRIFDLME--ERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNE 651

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT   +L AC+  G ++ G +                       + KS   +Y       
Sbjct: 652 VTFVGLLNACSHAGLVDEGWK-----------------------FFKSMSQDYG---LTP 685

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +PE     Y  M+   G+ G  + A      M    IEPD + + A+L AC      + G
Sbjct: 686 LPEH----YACMVDLLGRTGDVQGAEQFIYDMP---IEPDTVIWSALLGACKIHKNAEIG 738

Query: 634 LQIFDLMQQEYKIQPSTE-HYCCVADM---LGRVGKVVEAYEFVKELG 677
            +     ++ ++I+PS   +Y  ++++   LG  G+V E  + +K+ G
Sbjct: 739 KRA---AEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQG 783


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 237/838 (28%), Positives = 406/838 (48%), Gaps = 115/838 (13%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           +L+     +R+  + + GR   AR++FD++ R   + WN++I  +  N +P  A  LY  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIG-----KAVHCHFIRCF------------- 137
           +   +  T     +    L    E R +  G            I C+             
Sbjct: 91  ISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLF 150

Query: 138 -SNPSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
            + PSR V  +NS+L  Y   L  +DA                    +F+ M  RN+V+W
Sbjct: 151 DAMPSRDVSSWNSMLTGYCHSLQMVDAR------------------NLFEKMPERNLVSW 192

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
             ++S Y + E + +A   F  M R G+ P   +F +   A+  LG+    + +  L +K
Sbjct: 193 TVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALK 252

Query: 255 LGSEYVNDLFVASSAIFMYA-ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
            G E   D+ + ++ + +Y+ +    D A K F++ +ERN   W+TMI            
Sbjct: 253 TGFE--RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGR---- 306

Query: 314 IELFVQVLELDEIVFDDVTFLSAL-SAVSQLQELDLGQQLHAYIIKNFVALPVIV-LNAV 371
           I+  + V E D +    +   +AL + ++Q   +D      A I+   +  P++V  NA+
Sbjct: 307 IDAAIAVYERDPV--KSIACRTALITGLAQCGRID-----DARILFEQIPEPIVVSWNAL 359

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           I                     R+ +SW  MI+ + QNG  +E L L+ E+ + G +   
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEK 470
            ++T++  A SN+   + G Q H+  ++ G  F     + LI MY K   ++ ARQ+F +
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML------------------------- 505
             +  +D  +WN+ +A   QN LL+EA   F  ML                         
Sbjct: 480 MVT--KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMG 537

Query: 506 -------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
                  EH + PN   +  +L  C  +G  ++G+Q+H  +I+  +D  + V  +LI MY
Sbjct: 538 AFKTMFCEHEL-PNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            K G  + +  +F  + E++  T+ T+I GY QHG+   A+ +++ M+  G+ P+ +TFV
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            +L+ACS+AGLVDEG + F  M Q+Y + P  EHY C+ D+LGR G V  A +F+ ++  
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           E + + IW +LLG+C++H ++E+ +  A+KL  ++  N+  G +V+LSNIY+  G W  V
Sbjct: 716 EPDTV-IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNA--GNYVMLSNIYSSLGMWGEV 772

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +VRK M+++G+ KE GCSW  +   ++ F + D++H Q  +I   LE L   ++  G
Sbjct: 773 AEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 165/708 (23%), Positives = 287/708 (40%), Gaps = 133/708 (18%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  S L+  C   +   AR LF+ +     V W  +I G+       +A
Sbjct: 149 LFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKA 208

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
             ++ +M +       D   ++S L A     NL + +++    ++        +  ++L
Sbjct: 209 WDIFCKMHREGLLP--DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAIL 266

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           N+YS                  D S  D   K F++M  RN   W+T+++      R   
Sbjct: 267 NVYSR-----------------DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDA 309

Query: 210 AVRQFRM--MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           A+  +    +  +  R + I+       L+  G    A +++        E + +  V S
Sbjct: 310 AIAVYERDPVKSIACRTALIT------GLAQCGRIDDARILF--------EQIPEPIVVS 355

Query: 268 --SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
             + I  Y + G  + A+++FD    RNT  W  MI GY QN    EA+ L +Q L    
Sbjct: 356 WNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGL-LQELHRSG 414

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------------- 366
           ++    +  S   A S +  L+ G Q+H+  +K      +F    +I             
Sbjct: 415 MLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYAR 474

Query: 367 -VLNAVIERDVVSWNTMISAFVQNGLDDEG-----------------LMLVYEMQKQGF- 407
            V + ++ +D+VSWN+ ++A VQN L DE                  ++  Y   +Q   
Sbjct: 475 QVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNE 534

Query: 408 -------------MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
                        + +S  +T LL    +L    +G+Q H   ++ G+  E +  + LI 
Sbjct: 535 AMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALIS 594

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G   + R+IF+  +  +RD  TWN +I GY Q+GL  EA   ++ M    V PN 
Sbjct: 595 MYFKCGCADS-RRIFDLME--ERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNE 651

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT   +L AC+  G ++ G +                       + KS   +Y       
Sbjct: 652 VTFVGLLNACSHAGLVDEGWK-----------------------FFKSMSQDYG---LTP 685

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +PE     Y  M+   G+ G  + A      M    IEPD + + A+L AC      + G
Sbjct: 686 LPEH----YACMVDLLGRTGDVQGAEQFIYDMP---IEPDTVIWSALLGACKIHKNAEIG 738

Query: 634 LQIFDLMQQEYKIQPSTE-HYCCVADM---LGRVGKVVEAYEFVKELG 677
            +     ++ ++I+PS   +Y  ++++   LG  G+V E  + +K+ G
Sbjct: 739 KRA---AEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQG 783


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 236/767 (30%), Positives = 399/767 (52%), Gaps = 59/767 (7%)

Query: 58  ARQLFDS-----ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           A ++FD      ++      WN+I+ G+       E I  + +M+            YS 
Sbjct: 104 AVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPD----AYSL 159

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +   A   +L   K +H + +R       F+ + L+ MY +C   LDA           
Sbjct: 160 CILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAW---------- 209

Query: 173 YSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                   ++F  +  + NVVAWN ++  + +   +  ++  + +     ++  + SF +
Sbjct: 210 --------RLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTS 261

Query: 232 VFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
              A    G++ S  + V+  LVKLG E  ND +V +S + MY++    + A  +FD   
Sbjct: 262 TLSACCQ-GEFVSFGMQVHCDLVKLGFE--NDPYVCTSLLTMYSKCKLVEDAENVFDQVS 318

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            + TE+WN MI  YV N    + ++++ Q +++ +I  D +T  + LS+   +   D G+
Sbjct: 319 VKKTELWNAMISAYVGNGRSYDGLKIYKQ-MKVLQIPPDSLTATNVLSSCCLVGSYDFGR 377

Query: 351 QLHAYIIK----NFVALPVIVL----------------NAVIERDVVSWNTMISAFVQNG 390
            +HA ++K    + VAL   +L                N +  RDVV+W +MIS F QN 
Sbjct: 378 LIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNR 437

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              E L     M   G   DS  + +++SA + L+N ++G   H   ++ G+  +  + S
Sbjct: 438 KYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVAS 497

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMY+K    K +  +F  +D   ++   WN++I+ Y +NGL + +   F QM ++ +
Sbjct: 498 SLVDMYSKFNFPKMSGNVF--SDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGL 555

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ V+I SVL + + +  +  GK +HG+ IR  +  ++ +  +LIDMY K G + YA +
Sbjct: 556 FPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQH 615

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F  + + N VT+  MI G G HG   +A+SLF  M+  GI PD ITF+++L++C++ G 
Sbjct: 616 IFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGF 675

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           ++EGL++F LM  E+ I+P  EHY  + D+LGR G++ +AY FVK L  E +   IW SL
Sbjct: 676 IEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPD-RSIWLSL 734

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L SCR+H + EL ++ A KLL+++   S    +V L N+Y E    +    +R  M+E+G
Sbjct: 735 LCSCRVHHNVELGKLAAHKLLDIEP--SRGSNYVQLLNLYGENELQDRAANLRASMKEKG 792

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           L+K  GCSWI+VG  ++ F S D   P++ +IY++L  L   MR  G
Sbjct: 793 LKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 293/613 (47%), Gaps = 46/613 (7%)

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           +TY S+LKAC    NL+ GK +H   I + F     ++  SL+N Y  C S  +A  V  
Sbjct: 50  FTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFD 109

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           K  E + S  D             V  WN+IV+ Y +     E + QF  M   G+RP  
Sbjct: 110 KLPESEVSGQD-------------VTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDA 156

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            S   +  A  S G    A  ++G  V+    +  D F+ S  I+MY   G    A ++F
Sbjct: 157 YSLCILLGA--SDGHLGYAKQIHGYSVR--KVFYGDPFLESGLIYMYFSCGRPLDAWRLF 212

Query: 287 DNCLER-NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
               ++ N   WN MIGG+ +N     ++E+++ + + + +     +F S LSA  Q + 
Sbjct: 213 KELEDKGNVVAWNVMIGGFGENGLWENSLEVYL-LAKNENVKLVSASFTSTLSACCQGEF 271

Query: 346 LDLGQQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISA 385
           +  G Q+H  ++K  F   P +                   V + V  +    WN MISA
Sbjct: 272 VSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISA 331

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +V NG   +GL +  +M+      DS+T T +LS+   + + D G+  HA L++  I   
Sbjct: 332 YVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSN 391

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             ++S L+ MY+K G    A  IF  N    RD   W +MI+G+ QN    EA   +  M
Sbjct: 392 VALQSALLTMYSKCGNSDDANSIF--NTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSM 449

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             +   P+   +ASV+ AC  + N+ LG  +HG +I+  L+Q+VFV +SL+DMYSK    
Sbjct: 450 TVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFP 509

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             + NVF+ +P KN V + ++I  Y ++G+ + ++SLF  M   G+ PD+++  +VL + 
Sbjct: 510 KMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSV 569

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S   ++ +G  +   + ++ +I    +    + DM  + G +  A    + + +    L 
Sbjct: 570 SSVAVLRKGKAVHGYLIRQ-RIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTN--LV 626

Query: 685 IWGSLLGSCRLHG 697
            W  ++  C  HG
Sbjct: 627 TWNIMIAGCGSHG 639



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 20/186 (10%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P ++  +F  +     V WN+II  +  N LP  +I L+SQM +   +   D+ + +SVL
Sbjct: 509 PKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFP--DSVSITSVL 566

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            + +    LR GKAVH + IR        + N+L++MY  C          LKY +    
Sbjct: 567 VSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGF--------LKYAQ---- 614

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                  +F  M + N+V WN +++       +++A+  F  M   GI P  I+F+++  
Sbjct: 615 ------HIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLT 668

Query: 235 ALSSLG 240
           + +  G
Sbjct: 669 SCNHCG 674


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/662 (30%), Positives = 350/662 (52%), Gaps = 32/662 (4%)

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            V   + D     F  + R      N ++  +   +  ++A+  +R ML  G RP   +F
Sbjct: 64  HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTF 123

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V    +  G        +  ++KLG     D++ A+S + +YA+LG    A ++FD  
Sbjct: 124 PVVLKCCARAGALGEGRAAHAAVIKLG--LGADVYTANSLVALYAKLGLVGDAERVFDGM 181

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             R+   WNTM+ GYV N     A+  F ++ +  ++  D V  ++AL+A      L LG
Sbjct: 182 PARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALG 241

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           +++H Y I++ +   V V  ++++                    R VV+WN MI  +  N
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME 448
               +      +M+  GF ++ VT   LL+A +   +   G+  HAY++R H +    +E
Sbjct: 302 ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLE 361

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L++MY K G ++++ +IF +    D+   +WN MIA Y    + +EA   F ++L   
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQIT--DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQP 419

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           + P+  T+ +V+PA   +G+I   KQ+H + ++     +  +  +++ MY++ G I  + 
Sbjct: 420 LYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASR 479

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F K+P K+ +++ T+I+GY  HG  + AL +F  MK  G+EP+  TFV+VL+ACS +G
Sbjct: 480 EIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           L  EG + F+ MQQEY + P  EHY C+ D+LGR G++ E   F++ +        IWGS
Sbjct: 540 LEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENM-PIAPTSRIWGS 598

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL + R     ++AE  A+++ +++  N+  G +V+LS++YA+ G WE+V+++R  M+E+
Sbjct: 599 LLTASRNKNDIDIAEYAAERIFQLEHNNT--GCYVVLSSMYADAGRWEDVERIRSLMKEK 656

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV-DA 807
           GLR+    S +++      F + D  HPQS KI+E  + L+   RN G     +SN+ D+
Sbjct: 657 GLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILS---RNIGEDLDSSSNLRDS 713

Query: 808 TP 809
            P
Sbjct: 714 DP 715



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 243/540 (45%), Gaps = 57/540 (10%)

Query: 16  TATPPPPQLPQIHS---LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVI 72
           T+  PPP+    H     S PI    +      LS +   GR   A   F  +TRP   +
Sbjct: 29  TSKEPPPRTRPKHGEGGASRPISSSGSRPKSLILSHV-AAGRMDEAADAFAGVTRPGAFL 87

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
            N +I GF   +LP +A+  Y  M  +      D +T+  VLK CA    L  G+A H  
Sbjct: 88  HNVMIRGFADADLPLDALAAYRAMLDAGARP--DRFTFPVVLKCCARAGALGEGRAAHAA 145

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            I+       +  NSL+ +Y+      DAE                  +VFD M  R++V
Sbjct: 146 VIKLGLGADVYTANSLVALYAKLGLVGDAE------------------RVFDGMPARDIV 187

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMM---LRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +WNT+V  YV       A+  FR M   L++G    ++  +    A            ++
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVG--HDSVGVIAALAACCLESALALGREIH 245

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           G  ++ G E   D+ V +S + MY + G   FA  +F     R    WN MIGGY  N  
Sbjct: 246 GYAIRHGLE--QDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNER 303

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
           PV+A + F+Q + +D    + VT ++ L+A +Q +    G+ +HAY+++    LP +VL 
Sbjct: 304 PVDAFDCFMQ-MRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHF-LPHVVLE 361

Query: 370 A---------------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
                                 + ++ +VSWN MI+A++   +  E + L  E+  Q   
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY 421

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQI 467
            D  T+T ++ A   L +    KQ H+Y+++ G     +  + ++ MYA+ G I  +R+I
Sbjct: 422 PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREI 481

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+K     +D  +WN +I GY  +G  + A   F +M    + PN  T  SVL AC+  G
Sbjct: 482 FDKMPG--KDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 236/766 (30%), Positives = 384/766 (50%), Gaps = 62/766 (8%)

Query: 24  LPQIHS---LSPPIPKLKTPTIRSR-LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           LP  H+   +S  +P L    +  R  SK+   GR   AR+LFDS+     V W + I  
Sbjct: 49  LPPAHARAVVSGLLPDLFLANLLLRGYSKL---GRLGDARRLFDSMPSRNLVSWGSAISM 105

Query: 80  FVCNNLPYEAILLYSQMKKS---SPYTSCDN-YTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +  +    +A+LL++    +   SP     N +  +S L+ACA++R  R G+ VH    +
Sbjct: 106 YAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAK 165

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
              + + FV  +L+N+Y+                     + D    VFD +  RN V W 
Sbjct: 166 LGLDANVFVGTALVNLYAKA------------------GRIDAAMSVFDALPARNPVTWT 207

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
            +++ Y +  +   A+  F  M   G+RP      +   A S LG  +    ++G   + 
Sbjct: 208 AVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRT 267

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
            +E  +D  V ++ I +Y +      AR++FD+   RN   W TMI GY+QN+   EA+ 
Sbjct: 268 AAE--SDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMS 325

Query: 316 LFVQVLEL--DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI- 366
           +F Q+ +      VF   + L++  +++ + +   G+Q+HA++IK       +V   +I 
Sbjct: 326 MFWQLSQAGWQPDVFACTSILNSCGSLAAIWQ---GRQVHAHVIKADLESDEYVKNALID 382

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        V  A+ E D +S+N MI  + + G     + +  +M+        +T
Sbjct: 383 MYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLT 442

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKND 472
             +LL  +S+  + ++ KQ H  +++ G   +    S LID+Y+K  L+  A+ +F    
Sbjct: 443 FVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQ 502

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             +RD   WNAMI G  QN   EEA   F ++    +TPN  T  +++   + + +I  G
Sbjct: 503 --NRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHG 560

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +Q H   I+   D +  +  +LIDMY+K G I     +F     K+ + + +MI  Y QH
Sbjct: 561 QQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQH 620

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G +E AL +F  M+G G+EP+ +TFV+VLSAC++AGLVDEGL  F+ M+ +Y ++P TEH
Sbjct: 621 GHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEH 680

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y  V ++ GR GK+  A EF++ +  E  V  IW SLL +C L G+ E+     +  L  
Sbjct: 681 YASVVNLFGRSGKLHAAKEFIERMPIE-PVATIWRSLLSACHLFGNVEIGRYATEMALLA 739

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           D  +S P   VL+SNIYA +G W +  K+R+ M   G+ KE G SW
Sbjct: 740 DPADSGPS--VLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 340/636 (53%), Gaps = 38/636 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M R+NVVAW +++S Y +  R   A+  F  M+  G+ P+  +      A + LG 
Sbjct: 70  LFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGA 129

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            ++ + V+ L V+ G  +  D ++ S  I MY+  G    A+++FD     +   + ++I
Sbjct: 130 LRAGEQVHSLAVRAG--FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF- 360
             + +N     A E  +Q+L+   +  ++ T  + L+A  ++    LGQQ+H Y+IK   
Sbjct: 188 SAFCRNGEFELAAEALIQMLK-QGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIG 242

Query: 361 ---------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                                  L   V +++  ++VVSW +M+  ++++G  +E L + 
Sbjct: 243 LRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVF 302

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
            +M  +G   +   ++ +L A  ++    +G+Q H   ++H +  +  + + L+ MY ++
Sbjct: 303 GDMISEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRT 359

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL++    +  K +  + D  +W   I+   QNG  E+A     QM     TPN    +S
Sbjct: 360 GLVEELEAMLNKIE--NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSS 417

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL +C  + +++ G Q H  +++   D  +  G +LI+MYSK G +  A   F  +   +
Sbjct: 418 VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD 477

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
             ++ ++I G+ QHG + +AL +F  M+  GI+PD  TF+ VL  C+++G+V+EG   F 
Sbjct: 478 VTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR 537

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM  +Y   P+  HY C+ DMLGR G+  EA   + ++  E + L IW +LL SC+LH +
Sbjct: 538 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL-IWKTLLASCKLHRN 596

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ++ ++ A +L+E+  R+S    +VL+SNIYA  G WE+  KVR+ M E G++K+ GCSW
Sbjct: 597 LDIGKLAADRLMELSDRDS--ASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           I++   V+ FAS+D  HP S  IY+ML  L   M++
Sbjct: 655 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 284/633 (44%), Gaps = 99/633 (15%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           RL+++ + GR   A  LFD + R   V W +++ G+  N  P  A+ +++ M +S    +
Sbjct: 54  RLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG--VA 111

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            +++  ++ L ACA+   LR G+ VH   +R       ++ + L+ MYS C S   A+  
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK-- 169

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           +VFD M   +VV + +++S + +   +  A      ML+ G++P
Sbjct: 170 ----------------EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKP 213

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  +   +  A   +   +    ++G L+K        ++ +++ I  Y+  G F  A+ 
Sbjct: 214 NEHTMTTILTACPRVLGQQ----IHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKA 269

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQ 342
           +FD+   +N   W +M+  Y+++    EA+++F  ++   +D   F     L A  ++  
Sbjct: 270 VFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG- 328

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTM 382
                LG+QLH   IK+ +   + V NA++                      D+VSW T 
Sbjct: 329 -----LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ISA  QNG  ++ + L+ +M  +GF  +    +++LS+ +++ + D G Q H   L+ G 
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             E    + LI+MY+K G + +AR  F+   +   D  +WN++I G+ Q+G   +A   F
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHT--HDVTSWNSLIHGHAQHGDANKALEVF 501

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLID 556
            +M  + + P+  T   VL  CN  G +E G+       R ++DQ  F         +ID
Sbjct: 502 SKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF----FRLMIDQYSFTPAPSHYACMID 557

Query: 557 MYSKSG-------VIN----------------------------YAANVFAKIPEKNSVT 581
           M  ++G       +IN                             AA+   ++ +++S +
Sbjct: 558 MLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSAS 617

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           Y  M   Y  HG  E A  + R M   G++ DA
Sbjct: 618 YVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA 650



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           KSG +  A ++F ++P KN V +T+++ GY ++G  E AL++F  M   G+ P+     A
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L AC+  G +  G Q+  L  +            C+ +M  R G +  A E    + + 
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRA-GFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM-DS 177

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            +V+     +   CR +G  ELA   A+ L++M  +   P  H + + + A
Sbjct: 178 PDVVGYTSLISAFCR-NGEFELA---AEALIQMLKQGLKPNEHTMTTILTA 224


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 330/629 (52%), Gaps = 46/629 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F+ M   +   WN I+  Y     + EA+  +  M   GIR    +F  V  A   L  
Sbjct: 80  MFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLA 139

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 V+G L+K+G +   D++V +  I MY ++G  + A K+FD    R+   WN+M+
Sbjct: 140 LMVGQKVHGKLIKIGFDL--DVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMV 197

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY  +   + ++  F ++L L     D    +SAL A S    L  G ++H  +I++ +
Sbjct: 198 SGYQIDGDGLSSLMCFKEMLRLGNKA-DRFGMISALGACSIEHCLRSGMEIHCQVIRSEL 256

Query: 362 ALPVIV--------------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            L ++V                     N +  +++V+WN MI                  
Sbjct: 257 ELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG---------------- 300

Query: 402 MQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
           MQ+   +I D +T+  LL + S       GK  H + +R   + +  +E+ L+DMY K G
Sbjct: 301 MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCG 360

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +K A  +F  N   +++  +WN M+A Y QN   +EA   F+ +L   + P+ +TIASV
Sbjct: 361 ELKLAEHVF--NQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASV 418

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           LPA   + +   GKQ+H + ++  L  N F+  +++ MY+K G +  A   F  +  K+ 
Sbjct: 419 LPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDV 478

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++ TMI+ Y  HG    ++  F  M+G G +P+  TFV++L+ACS +GL+DEG   F+ 
Sbjct: 479 VSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNS 538

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+ EY I P  EHY C+ D+LGR G + EA  F++E+        IWGSLL + R H   
Sbjct: 539 MKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTA-RIWGSLLAASRNHNDV 597

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            LAE+ A+ +L +   N+  G +VLLSN+YAE G WE+VD+++  M+E+GL K VGCS +
Sbjct: 598 VLAELAARHILSLKHDNT--GCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMV 655

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           D+ G    F ++D+ H  ++ IY++L+ L
Sbjct: 656 DINGRSESFINQDRSHAHTNLIYDVLDIL 684



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 165/617 (26%), Positives = 286/617 (46%), Gaps = 83/617 (13%)

Query: 1   MASSSVPLPLPPPPPTATP---PPPQLPQIHSL----SPPIPKLKTPT------------ 41
           MAS+ +   L      A+P    PP+  Q        SP I + ++ T            
Sbjct: 1   MASALIHCSLYNAYKNASPEQNKPPKAAQFKRKTTRKSPFIKRAQSKTSFKPLARPNDLN 60

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           I   L    + G    A  +F+ +    T IWN II G+  N L  EAI  Y +M+    
Sbjct: 61  ITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGI 120

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
            +  DN+T+  V+KAC E   L +G+ VH   I+   +   +V N L++MY         
Sbjct: 121 RS--DNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMY--------- 169

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
             + + ++E       L  KVFD M  R++V+WN++VS Y      + ++  F+ MLR+G
Sbjct: 170 --LKIGFIE-------LAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLG 220

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
            +      ++   A S     +S   ++  +++  SE   D+ V +S I MY + G  D+
Sbjct: 221 NKADRFGMISALGACSIEHCLRSGMEIHCQVIR--SELELDIMVQTSLIDMYGKCGKVDY 278

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A ++F+    +N   WN MIGG                + E D+++ D +T ++ L + S
Sbjct: 279 AERVFNRIYSKNIVAWNAMIGG----------------MQEDDKVIPDVITMINLLPSCS 322

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVL---------------------NAVIERDVVSWN 380
           Q   L  G+ +H + I+    LP +VL                     N + E+++VSWN
Sbjct: 323 QSGALLEGKSIHGFAIRKMF-LPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWN 381

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           TM++A+VQN    E L +   +  +    D++T+ ++L A + L ++  GKQ H+Y+++ 
Sbjct: 382 TMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKL 441

Query: 441 GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G+     + + ++ MYAK G ++TAR+ F+      +D  +WN MI  Y  +G    +  
Sbjct: 442 GLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVC--KDVVSWNTMIMAYAIHGFGRTSIQ 499

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMY 558
            F +M      PN  T  S+L AC+  G I+ G    +   + Y +D  +     ++D+ 
Sbjct: 500 FFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLL 559

Query: 559 SKSGVINYAANVFAKIP 575
            ++G ++ A     ++P
Sbjct: 560 GRNGNLDEAKCFIEEMP 576



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 173/359 (48%), Gaps = 21/359 (5%)

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           ++   +++  +L++ + L  ++    +   + +   +   D   WN +I  +  NGL  E
Sbjct: 48  TSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQE 107

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            +   Y M+ +G   D+ T   ++ A   L    VG++ H  L++ G   +  + ++LID
Sbjct: 108 AIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLID 167

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G I+ A ++F++     RD  +WN+M++GY  +G    + + F++ML      + 
Sbjct: 168 MYLKIGFIELAEKVFDEMPV--RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADR 225

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
             + S L AC+    +  G ++H   IR  L+ ++ V TSLIDMY K G ++YA  VF +
Sbjct: 226 FGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNR 285

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I  KN V +  MI      GM E             + PD IT + +L +CS +G + EG
Sbjct: 286 IYSKNIVAWNAMI-----GGMQEDD----------KVIPDVITMINLLPSCSQSGALLEG 330

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             I     ++  + P       + DM G+ G++  A     ++ E+  V   W +++ +
Sbjct: 331 KSIHGFAIRKMFL-PYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMV--SWNTMVAA 386


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 224/757 (29%), Positives = 379/757 (50%), Gaps = 85/757 (11%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           LF  +       W   IIG  C   L  EA++ + +M ++  +   DN+   +V KAC  
Sbjct: 127 LFSKLRVRNVYSW-AAIIGVKCRIGLCEEALMGFVEMLQNEIFP--DNFVVPNVCKACGA 183

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
            +  R G+ VH + ++   +   FV +SL +MY  C    DA                  
Sbjct: 184 LQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDAR----------------- 226

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            KVFD +  RNVVAWN ++  YV+     EA+R    M + GI P+ ++      A +++
Sbjct: 227 -KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANM 285

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              +     + + +  G E  N   + +S +  Y ++G  ++A  IFD  +E++   WN 
Sbjct: 286 DGIEEGKQSHAIAIVNGLELDN--ILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNL 343

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I GYVQ     +AI +  Q++ L+ + +D VT  + +SA ++ Q L LG+++  Y I++
Sbjct: 344 LISGYVQQGLVEDAIHM-CQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRH 402

Query: 360 FVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
             A  ++                    V ++V+ +D++ WNT++S + ++GL  E   L 
Sbjct: 403 SFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLF 462

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           YEMQ +    +++T   ++   S LRN                                G
Sbjct: 463 YEMQLESVPPNAITWNLII--LSFLRN--------------------------------G 488

Query: 460 LIKTARQIFEKNDSGD--RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            +  A++IF +  S     +  +W  M+ G  QNG  EEA +  R+M E  + PN  +I 
Sbjct: 489 QVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSIT 548

Query: 518 SVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             L AC+ + ++  G+ +HG+ IR      +V + TSL+DMY+K G IN A  VF     
Sbjct: 549 VALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLC 608

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +   Y  MI  Y  +G  + A++L R ++  GI+PD ITF ++LSAC++AG V + ++I
Sbjct: 609 SDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEI 668

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  ++ I+P  EHY  + D+L   G+  +A   ++E+  + +   I  SL+ SC + 
Sbjct: 669 FTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKSDARMI-QSLVASCNMK 727

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             +EL + +++ LLE +  NS  G +V +SN YA EG+W+ V K R+ M+ + L+K  GC
Sbjct: 728 HKTELMDFLSRHLLETEPENS--GNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGC 785

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           SWI + G V+ F + D+ H ++ +I  +L  LA +M+
Sbjct: 786 SWIRIKGGVHVFVANDKTHLRNKEIRSILALLAYDMQ 822



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 242/461 (52%), Gaps = 25/461 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+   F+ +  +F     RN   W  +
Sbjct: 83  DLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAI 142

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +     EA+  FV++L+ +EI  D+    +   A   LQ    G+ +H Y++K+ 
Sbjct: 143 IGVKCRIGLCEEALMGFVEMLQ-NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSG 201

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + ER+VV+WN ++  +VQNG+++E + L+ 
Sbjct: 202 LHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLS 261

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+K+G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + +  ++ Y K G
Sbjct: 262 DMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVG 321

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF++    ++D  TWN +I+GY Q GL+E+A    + M   N+  + VT++++
Sbjct: 322 LIEYAEMIFDR--MIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTL 379

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+    ++ + ++ +DMY+  G I  A  VF  +  K+ 
Sbjct: 380 MSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDL 439

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G+S  A  LF  M+   + P+AIT+  ++ +    G V+E  +IF  
Sbjct: 440 ILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQ 499

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           MQ    I P+   +  + + L + G   EA  F++++ E G
Sbjct: 500 MQSS-GIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESG 539



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 260/530 (49%), Gaps = 51/530 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     V WN +++G+V N +  EAI L S M+K     +    T S+ L A 
Sbjct: 225 ARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPT--RVTVSTCLSAS 282

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +  GK  H   I         +  S LN Y           VGL    ++Y++  
Sbjct: 283 ANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCK---------VGL----IEYAEM- 328

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  ++VV WN ++S YV+     +A+   ++M    ++   ++   +  A +
Sbjct: 329 ----IFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAA 384

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              + K    V    ++    + +D+ +AS+A+ MYA  G    A+K+FD+ L ++  +W
Sbjct: 385 RTQNLKLGKEVQCYCIR--HSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILW 442

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++  Y ++    EA  LF + ++L+ +  + +T+   + +  +  +++  +++ + + 
Sbjct: 443 NTLLSVYAESGLSGEAFRLFYE-MQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQ 501

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            + +  P          ++VSW TM++  VQNG  +E ++ + +MQ+ G   ++ ++T  
Sbjct: 502 SSGI-FP----------NLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVA 550

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LSA SNL +   G+  H Y++R+  H     +E+ L+DMYAK G I  A  +F       
Sbjct: 551 LSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCS- 609

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
            D   +NAMI+ Y  NG ++EA    R++ +  + P+ +T  S+L ACN  G++    ++
Sbjct: 610 -DLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEI 668

Query: 536 -------HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
                  HG  I+  L+        ++D+ + +G  + A  +  ++P K+
Sbjct: 669 FTDMVSKHG--IKPCLEHYGL----MVDILASAGETDKALRLIEEMPYKS 712



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 187/375 (49%), Gaps = 38/375 (10%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  G+Q+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 82  RDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAA 141

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +E LM   EM +     D+  V  +  A   L+    G+  H Y+++ G
Sbjct: 142 IIGVKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSG 201

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K G++  AR++F+  +  +R+   WNA++ GY QNG+ EEA   
Sbjct: 202 LHDCVFVASSLADMYGKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRL 259

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M +  + P  VT+++ L A   M  IE GKQ H  +I   L+ +  +GTS ++ Y K
Sbjct: 260 LSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCK 319

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F ++ EK+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 320 VGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTL 379

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYE-FVKE 675
           +SA +    +  G ++     Q Y I+ S      +A    DM    G +++A + F   
Sbjct: 380 MSAAARTQNLKLGKEV-----QCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSV 434

Query: 676 LGEEGNVLEIWGSLL 690
           L ++   L +W +LL
Sbjct: 435 LAKD---LILWNTLL 446



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  ++G   E L L+ EM  +   I       +L      R+   GKQ HA +L++G 
Sbjct: 40  VSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 99

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK    + +  +F K     R+  +W A+I    + GL EEA +
Sbjct: 100 FYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRV--RNVYSWAAIIGVKCRIGLCEEALM 157

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +ML++ + P+   + +V  AC  +     G+ +HG+ ++  L   VFV +SL DMY 
Sbjct: 158 GFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYG 217

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  GIEP  +T   
Sbjct: 218 KCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVST 277

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +    ++EG Q
Sbjct: 278 CLSASANMDGIEEGKQ 293



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 198/453 (43%), Gaps = 83/453 (18%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+  +   
Sbjct: 312 SNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKY 371

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A A T+NL++GK V C+ IR        + ++ ++MY+ C S +DA+ 
Sbjct: 372 DC--VTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAK- 428

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD++  ++++ WNT++S Y ++    EA R F  M    + 
Sbjct: 429 -----------------KVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVP 471

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +    G    A  ++  +              SS IF            
Sbjct: 472 PNAITWNLIILSFLRNGQVNEAKEIFSQM-------------QSSGIF------------ 506

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  +   ALSA S L
Sbjct: 507 --------PNLVSWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACSNL 557

Query: 344 QELDLGQQLHAYIIKNF---------------------VALPVIVLNAVIERDVVSWNTM 382
             L  G+ +H YII+N                      +    +V  + +  D+  +N M
Sbjct: 558 ASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAM 617

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY---LLR 439
           ISA+  NG   E + L   ++  G   D++T T+LLSA ++    DV +    +   + +
Sbjct: 618 ISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHA--GDVSQAVEIFTDMVSK 675

Query: 440 HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           HGI    +E Y  ++D+ A +G    A ++ E+
Sbjct: 676 HGIK-PCLEHYGLMVDILASAGETDKALRLIEE 707


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 207/631 (32%), Positives = 331/631 (52%), Gaps = 36/631 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF--PALSSL 239
           +F +   RN   W  ++  +    R  +A+  FR ML  G+ P  ++   V   P  +  
Sbjct: 310 LFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT-- 367

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                   ++   +K G +    +FV ++ +  Y + G    AR++F    +++   +N 
Sbjct: 368 -----VPSLHPFAIKFGLD--THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNA 420

Query: 300 MIGGYVQNNHPVEAIELFVQV---------LELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           M+ G  +     +A++LF  +         L L +         S L+       LD   
Sbjct: 421 MMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYS 480

Query: 351 QLHAY--IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +      + + F  +P        ERD VS+N +I+A+  N      L L  EMQK GF 
Sbjct: 481 KCDCLDDMRRLFDEMP--------ERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 532

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQI 467
              +    +LS A +L +  +GKQ HA L+  G+  E +  + LIDMY+K G++  A+  
Sbjct: 533 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 592

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F  ++  ++   +W A+I GY QNG  EEA   F  M    + P+  T +S++ A + + 
Sbjct: 593 F--SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA 650

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            I LG+QLH + IR     +VF G+ L+DMY+K G ++ A   F ++PE+NS+++  +I 
Sbjct: 651 MIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVIS 710

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            Y  +G ++ A+ +F  M  CG  PD++TF++VL+ACS+ GL DE ++ F LM+ +Y I 
Sbjct: 711 AYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSIS 770

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P  EHY CV D LGRVG   +  + + E+  + + + IW S+L SCR+HG+ ELA V A 
Sbjct: 771 PWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPI-IWTSILHSCRIHGNQELARVAAD 829

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
           KL  M+  ++ P  +V+LSNIYA  G WE+   V+K MR+RG+RKE G SW+++   +  
Sbjct: 830 KLFGMEPTDATP--YVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYS 887

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           FAS D   P   +I + L+RL  EM   G K
Sbjct: 888 FASNDLTSPMIDEIKDELDRLYKEMDKQGYK 918



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 168/694 (24%), Positives = 297/694 (42%), Gaps = 96/694 (13%)

Query: 8   LPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSR-----------------LSKIC 50
           +P+P  P T+ P     P     +P +  LK P+ ++                  L  + 
Sbjct: 213 MPVPATPSTSPPWKEYAPA----APGVVPLKQPSSQAAPAGVTGFDVLTYRLNLGLRSLL 268

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYT 109
             G  H AR +FD +        N I+  +  + +LP    L  S     SP+ +   +T
Sbjct: 269 SSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLS-----SPHRNATTWT 323

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD--AEMVGLK 167
              +++A A         ++    +     P R    ++LN+    + SL   A   GL 
Sbjct: 324 I--MMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSLHPFAIKFGLD 381

Query: 168 -YVEVDYSKYDLVCK---------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
            +V V  +  D  CK         VF  M  ++ V +N ++    K   + +A++ F  M
Sbjct: 382 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAM 441

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
            R G     +  +    + S                   S  V ++FV +S +  Y++  
Sbjct: 442 RRAGYSRHPLHLLQYSHSRSR------------------STSVLNVFVNNSLLDFYSKCD 483

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD--VTFLS 335
           C D  R++FD   ER+   +N +I  Y  N      + LF    E+ ++ FD   + + +
Sbjct: 484 CLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF---REMQKLGFDRQVLPYAT 540

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            LS    L ++ +G+Q+HA ++   +A   ++ NA+I                    E+ 
Sbjct: 541 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 600

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            +SW  +I+ +VQNG  +E L L  +M++ G   D  T ++++ A+S+L    +G+Q H+
Sbjct: 601 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 660

Query: 436 YLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           YL+R G     F G  S L+DMYAK G +  A + F+  +  +R+  +WNA+I+ Y   G
Sbjct: 661 YLIRSGYKSSVFSG--SVLVDMYAKCGCLDEALRTFD--EMPERNSISWNAVISAYAHYG 716

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG-NIELGKQLHGFSIRYLLDQNVFVG 551
             + A   F  ML     P+ VT  SVL AC+  G   E  K  H    +Y +       
Sbjct: 717 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHY 776

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +ID   + G  +    +  ++P K + + +T+++     HG  E  L+   + K  G+
Sbjct: 777 ACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE--LARVAADKLFGM 834

Query: 611 EP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           EP DA  +V + +  + AG  ++   +  +M+  
Sbjct: 835 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDR 868


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 226/692 (32%), Positives = 353/692 (51%), Gaps = 79/692 (11%)

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           PY   + + Y ++L+ C   +N+   K +H   I+   N + FV + L++    C  S  
Sbjct: 22  PYKILEQHPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHF---CAVSPS 75

Query: 161 AEM-VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
            ++   L   E +   +           + NV  WN+++  Y  +   + ++  F  ML 
Sbjct: 76  GDLSYALSLFEENQQHH-----------KHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLY 124

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G++P++ +F  +F + +          ++   +KL   +  +  V +S I MYA +G  
Sbjct: 125 YGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF--NPHVHTSVIHMYASVGEM 182

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           DFAR +FD    R+   +  +I GYV      +A  LF      DEI             
Sbjct: 183 DFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLF------DEI------------- 223

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                                   PV        +DVVSWN MIS +VQ+G  +E ++  
Sbjct: 224 ------------------------PV--------KDVVSWNAMISGYVQSGRFEEAIVCF 251

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
           YEMQ+   + +  T+  +LSA  + R+ ++GK   +++  +G      + + LIDMY K 
Sbjct: 252 YEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKC 311

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G    AR++F+  +  ++D  +WN MI GY+   L EEA   F  ML  NV PN VT   
Sbjct: 312 GETDIARELFDGIE--EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLG 369

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +L AC  +G ++LGK +H +  + L +  N  + TSLIDMY+K G I  A  VF  +  +
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR 429

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGI-EPDAITFVAVLSACSYAGLVDEGLQI 636
           N  ++  M+ G+  HG +ERAL+LF  M   G+  PD ITFV VLSAC+ AGLVD G Q 
Sbjct: 430 NLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQY 489

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M Q+Y I P  +HY C+ D+L R  K  EA   +K +  E +   IWGSLL +C+ H
Sbjct: 490 FRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDG-AIWGSLLSACKAH 548

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G  E  E VA++L +++  N+  G  VLLSNIYA  G W++V ++R  + ++G++K  GC
Sbjct: 549 GRVEFGEYVAERLFQLEPENA--GAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGC 606

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           + I++ G V+ F   D+ HP+ + IY+ML  +
Sbjct: 607 TSIEIDGDVHEFLVGDKFHPECNNIYKMLNEV 638



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 252/550 (45%), Gaps = 75/550 (13%)

Query: 8   LPLPPPPPTATPPPPQL------------PQIHSLSPPIPKLKTPTIRSRLSKICQ---E 52
           LP   PP       P L             QIHSL        T  ++S+L   C     
Sbjct: 16  LPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPS 75

Query: 53  GRPHLARQLFDSIT---RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           G    A  LF+      +    IWN++I G+  ++ P  ++ L+S+M         +++T
Sbjct: 76  GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG--VQPNSHT 133

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  + K+C + +    GK +H H ++   + +  V+ S+++MY++      A +V  K  
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193

Query: 170 EVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
             D   +             D   ++FD +  ++VV+WN ++S YV++ R+ EA+  F  
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND------LFVASSAI 270
           M    + P+  + V V   LS+ G  +S     G L K    +V D      L + ++ I
Sbjct: 254 MQEANVLPNKSTMVVV---LSACGHTRS-----GELGKWIGSWVRDNGFGSNLQLTNALI 305

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MY + G  D AR++FD   E++   WNTMIGGY   +   EA+ LF +V+    +  +D
Sbjct: 306 DMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALF-EVMLRSNVKPND 364

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNF---------------------VALPVIVLN 369
           VTFL  L A + L  LDLG+ +HAYI KN                      +     V  
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQD 428
           ++  R++ SWN M+S F  +G  +  L L  EM  +G F  D +T   +LSA +     D
Sbjct: 425 SMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVD 484

Query: 429 VGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +G Q    +++ +GI    ++ Y  +ID+ A++   + A +I  KN   + D A W +++
Sbjct: 485 LGHQYFRSMIQDYGIS-PKLQHYGCMIDLLARAEKFEEA-EILMKNMEMEPDGAIWGSLL 542

Query: 486 AGYTQNGLLE 495
           +    +G +E
Sbjct: 543 SACKAHGRVE 552


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 232/702 (33%), Positives = 367/702 (52%), Gaps = 64/702 (9%)

Query: 98  KSSPYTSCDNYTYSSVLK-ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
           ++ P T+    T + ++K   A T ++R G+      +R F++  R    S   M S CL
Sbjct: 34  RNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSA--LRLFNSMPRRSSISWNAMISGCL 91

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
           S+                K+ L  ++F+ M  R++V+WN ++S  V   RY   +R  R+
Sbjct: 92  SN---------------DKFYLARQLFEKMPTRDLVSWNVMISGCV---RY-RNLRAARL 132

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           +         +S+  +    +  G  K A  ++  +    S   N +  A      Y + 
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAA------YVQN 186

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + AR++F++  +     WN M+GGYV+ N  V+A  +F ++ E DE+ ++     + 
Sbjct: 187 GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWN-----TM 241

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +S  +Q  EL   Q+L       F   PV        RDV +W  M+S +VQNG+ DE  
Sbjct: 242 ISGYAQNGELLEAQRL-------FEESPV--------RDVFTWTAMVSGYVQNGMLDEAR 286

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
            +   M ++    +SV+  A+++     +  D  ++     L   +  + + S+  +I  
Sbjct: 287 RVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARE-----LFEAMPCQNVSSWNTMITG 337

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YA++G I  AR  F++     RD  +W A+IAGY Q+G  EEA   F +M       N  
Sbjct: 338 YAQNGDIAQARNFFDRMPQ--RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 395

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  S L  C  +  +ELGKQ+HG  ++  L+   +VG +L+ MY K G I+ A  VF  I
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            EK  V++ TMI GY +HG  + AL LF SMK  GI PD +T V VLSACS+ GLVD+G 
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           + F  M Q+Y I  +++HY C+ D+LGR G++ +A   +K +  E +    WG+LLG+ R
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDA-ATWGALLGASR 574

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +HG++EL E  AK + EM+  NS  G +VLLSN+YA  G W +V ++R  MR+RG++K  
Sbjct: 575 IHGNTELGEKAAKMIFEMEPDNS--GMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVP 632

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           G SW++V   ++ F   D  HP+  +IY  LE L ++M+  G
Sbjct: 633 GYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEG 674



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 278/595 (46%), Gaps = 74/595 (12%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G+   A +LF+S+ R +++ WN +I G + N+  Y A  L+ +M         D  ++
Sbjct: 61  RNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR------DLVSW 114

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV--YNSLLNMYST-------------- 154
           + ++  C   RNLR  + +          P R V  +N++L+ Y+               
Sbjct: 115 NVMISGCVRYRNLRAARLLFDQM------PERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 168

Query: 155 -CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C +S+     G+    V   + +   ++F++     +++WN ++  YVK  R V+A   
Sbjct: 169 PCKNSISWN--GMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F    RM  R   +S+  +    +  G+   A  ++          V D+F  ++ +  Y
Sbjct: 227 FD---RMPERDE-VSWNTMISGYAQNGELLEAQRLF------EESPVRDVFTWTAMVSGY 276

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            + G  D AR++FD   E+N+  WN +I GYVQ     +A ELF      + +   +V+ 
Sbjct: 277 VQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF------EAMPCQNVSS 330

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
            + +      Q  D+ Q       +NF        + + +RD +SW  +I+ + Q+G  +
Sbjct: 331 WNTM-ITGYAQNGDIAQA------RNF-------FDRMPQRDSISWAAIIAGYAQSGYGE 376

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           E L L  EM++ G  ++  T T+ LS  + +   ++GKQ H  +++ G+     + + L+
Sbjct: 377 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALL 436

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY K G I  A  +FE  +  +++  +WN MIAGY ++G  +EA + F  M +  + P+
Sbjct: 437 VMYCKCGNIDDAYIVFEGIE--EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPD 494

Query: 513 VVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT+  VL AC+  G ++ G +  +  +  Y +  N    T +ID+  ++G ++ A N+ 
Sbjct: 495 DVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLM 554

Query: 572 AKIP-EKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDAITFVAVLS 622
             +P E ++ T+  ++     HG   + E+A  +   M     EPD      +LS
Sbjct: 555 KNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-----EPDNSGMYVLLS 604



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 235/529 (44%), Gaps = 68/529 (12%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +  + +S      + +LARQLF+ +     V WN +I G V       A LL+
Sbjct: 75  MPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLF 134

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY- 152
            QM +       D  +++++L   A+   ++  K +    + C ++ S   +N +L  Y 
Sbjct: 135 DQMPER------DVVSWNAMLSGYAQNGYVKEAKEIFDE-MPCKNSIS---WNGMLAAYV 184

Query: 153 ---------STCLSSLDAEMVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSW 200
                        S  D E++    +   Y K + +     +FD M  R+ V+WNT++S 
Sbjct: 185 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISG 244

Query: 201 YVKTERYVEAVRQFR-----------MMLRMGIRPSTISFV-NVFPALSSLGDYKSADVV 248
           Y +    +EA R F             M+   ++   +     VF  +          ++
Sbjct: 245 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII 304

Query: 249 YGLLVKLGSEYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            G +     +   +LF A         ++ I  YA+ G    AR  FD   +R++  W  
Sbjct: 305 AGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAA 364

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I GY Q+ +  EA+ LFV+ ++ D    +  TF S LS  +++  L+LG+Q+H  ++K 
Sbjct: 365 IIAGYAQSGYGEEALHLFVE-MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKA 423

Query: 360 FV--------ALPV------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            +        AL V            IV   + E++VVSWNTMI+ + ++G   E LML 
Sbjct: 424 GLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLF 483

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAK 457
             M+K G + D VT+  +LSA S+    D G +  ++    +GI       + +ID+  +
Sbjct: 484 ESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 543

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +G +  A+ +  KN   + D ATW A++     +G  E    A + + E
Sbjct: 544 AGRLDDAQNLM-KNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFE 591



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 42/291 (14%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           ++ Q   L   +P     +  + ++   Q G    AR  FD + +  ++ W  II G+  
Sbjct: 312 RMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ 371

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +    EA+ L+ +MK+       +  T++S L  CAE   L +GK VH   ++       
Sbjct: 372 SGYGEEALHLFVEMKRDGE--RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGC 429

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           +V N+LL MY  C +  DA      Y+            VF+ +  + VV+WNT+++ Y 
Sbjct: 430 YVGNALLVMYCKCGNIDDA------YI------------VFEGIEEKEVVSWNTMIAGYA 471

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY--- 259
           +     EA+  F  M + GI P  ++ V V  A S  G           LV  G+EY   
Sbjct: 472 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG-----------LVDKGTEYFYS 520

Query: 260 -VNDLFVASSA------IFMYAELGCFDFARKIFDNC-LERNTEVWNTMIG 302
              D  + +++      I +    G  D A+ +  N   E +   W  ++G
Sbjct: 521 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 209/624 (33%), Positives = 334/624 (53%), Gaps = 45/624 (7%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           ML+ G    +  +V +       G    A  ++G +VK G+  + D+FVA+S + +Y   
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGT--IVDIFVATSLVNVYMRC 126

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    AR +FD   E+N   W  +I GY  N+ PV A+E+FV++L+L      D T    
Sbjct: 127 GNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYP-SDYTLGGM 185

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           LSA      +DLG+Q+H Y IK   A    + N++                     +++V
Sbjct: 186 LSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNV 245

Query: 377 VSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           ++W TMISA  ++    + GL L  +M K   M +  T+T+++S      + ++GKQ   
Sbjct: 246 ITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQG 305

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ---- 490
           +  + G      +++  + +Y + G  + A ++FE+ +  D    TWNAMI+G+ Q    
Sbjct: 306 FCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEME--DNSVITWNAMISGFAQIMDS 363

Query: 491 ---------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
                     G   +A   FR ++   + P++ T +S+L  C+ M  +E G+Q+H  +I+
Sbjct: 364 AKDDLHARSRGF--QALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIK 421

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                +V V ++L++MY+K G I YA   F ++P +  VT+T+MI GY QHG    A+ L
Sbjct: 422 TGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQL 481

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  M   G +P+ ITFV++LSACSYAGLV+E ++ FD+MQ EY I+P  +HY C+ DM  
Sbjct: 482 FEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFV 541

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R+G++ +AY F+K  G E N   IW SL+  CR HG+ ELA   A +LLE+  +  +   
Sbjct: 542 RLGRLDDAYAFIKRKGFEPNE-AIWSSLVAGCRSHGNMELAFYAADRLLELKPK--VVET 598

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VLL N+Y   G W +V +VRK  +   L      SWI +   V  F + D+ HPQS ++
Sbjct: 599 YVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTEL 658

Query: 782 YEMLERLAMEMRNAGNKTIQNSNV 805
           Y++LE L  + +  G +  QN+ +
Sbjct: 659 YQLLETLLEKAKAIGYEPYQNTEL 682



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 254/559 (45%), Gaps = 69/559 (12%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S  +  Y  +L  C ET +L   KA+H H ++  +    FV  SL+N+Y  C +S DA  
Sbjct: 75  SVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDAR- 133

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             +FD M  +NVV W  +++ Y    + V A+  F  ML++G  
Sbjct: 134 -----------------NLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRY 176

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  +   +  A  +  +      V+G  +K G+  +    + +S   +Y + G  +   
Sbjct: 177 PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITS--IGNSLCRLYTKSGNLESGI 234

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           + F    ++N   W TMI    ++ +  E  + LF+ +L+  E++ ++ T  S +S    
Sbjct: 235 RAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLK-GEVMPNEFTLTSVMSLCGT 293

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
             +++LG+Q+  +  K   A  + V N+ +                    +  V++WN M
Sbjct: 294 SLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAM 353

Query: 383 ISAFVQ---NGLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           IS F Q   +  DD        + L +  ++ +     D  T +++LS  S +   + G+
Sbjct: 354 ISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGE 413

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q HA  ++ G   +  + S L++MY K G I+ A + F +  +  R   TW +MI+GY+Q
Sbjct: 414 QIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPT--RTLVTWTSMISGYSQ 471

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLD 545
           +G   +A   F  M+     PN +T  S+L AC+  G +E   +      + + I  L+D
Sbjct: 472 HGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMD 531

Query: 546 QNVFVGTSLIDMYSKSGVINYA-ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
                   +IDM+ + G ++ A A +  K  E N   +++++ G   HG  E  L+ + +
Sbjct: 532 HY----GCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNME--LAFYAA 585

Query: 605 MKGCGIEPDAI-TFVAVLS 622
            +   ++P  + T+V +L+
Sbjct: 586 DRLLELKPKVVETYVLLLN 604



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 228/499 (45%), Gaps = 66/499 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR LFD +     V W  +I G+  N+ P  A+ ++ +M K   Y S  +YT   
Sbjct: 127 GNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPS--DYTLGG 184

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC  + N+ +GK VH + I+  +     + NSL  +Y+    +L++ +         
Sbjct: 185 MLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKS-GNLESGI--------- 234

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVN 231
                   + F  +  +NV+ W T++S   + E Y E  +  F  ML+  + P+  +  +
Sbjct: 235 --------RAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTS 286

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V     +  D      V G   K+G     +L V +S +++Y   G  + A ++F+   +
Sbjct: 287 VMSLCGTSLDMNLGKQVQGFCFKIGC--ATNLPVKNSTMYLYLRKGETEEAMRLFEEMED 344

Query: 292 RNTEVWNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +   WN MI G+ Q            +   +A+++F  ++    +  D  TF S LS  
Sbjct: 345 NSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVR-SAMKPDLFTFSSILSVC 403

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S +  L+ G+Q+HA  IK      V+V +A++                     R +V+W 
Sbjct: 404 STMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWT 463

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY--LL 438
           +MIS + Q+G   + + L  +M   G   + +T  +LLSA S      + ++   Y  ++
Sbjct: 464 SMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACS---YAGLVEEAMRYFDMM 520

Query: 439 RHGIHFEG-MESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           ++  H E  M+ Y  +IDM+ + G +  A   F K    + ++A W++++AG   +G +E
Sbjct: 521 QNEYHIEPLMDHYGCMIDMFVRLGRLDDAYA-FIKRKGFEPNEAIWSSLVAGCRSHGNME 579

Query: 496 EAFVAFRQMLEHNVTPNVV 514
            AF A  ++LE  + P VV
Sbjct: 580 LAFYAADRLLE--LKPKVV 596



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 134/309 (43%), Gaps = 37/309 (11%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A +LF+ +   + + WN +I GF              +  ++
Sbjct: 317 PVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQ 376

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ ++  + +S+     D +T+SS+L  C+    L  G+ +H   I+        V ++L
Sbjct: 377 ALKIFRDLVRSA--MKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSAL 434

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C               ++Y+      K F  M  R +V W +++S Y +  R  
Sbjct: 435 VNMYNKCGC-------------IEYAT-----KAFVEMPTRTLVTWTSMISGYSQHGRPH 476

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           +A++ F  M+  G +P+ I+FV++  A S  G  + A   + +   + +EY  +  +   
Sbjct: 477 DAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDM---MQNEYHIEPLMDHY 533

Query: 267 SSAIFMYAELGCFDFARK-IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
              I M+  LG  D A   I     E N  +W++++ G   + +   A     ++LEL  
Sbjct: 534 GCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKP 593

Query: 326 IVFDDVTFL 334
            V +    L
Sbjct: 594 KVVETYVLL 602


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 197/656 (30%), Positives = 347/656 (52%), Gaps = 51/656 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M R+NVVAW +++S Y +  R   A+  F  M+  G+ P+  +      A + LG 
Sbjct: 70  LFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGA 129

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            ++ + V+ L V+ G  +  D ++ S  I MY+  G    A+++FD     +   + ++I
Sbjct: 130 LRAGEQVHSLAVRAG--FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF- 360
             + +N     A E  +Q+L+   +  ++ T  + L+A  ++    LGQQ+H Y+IK   
Sbjct: 188 SAFCRNGEFELAAEALIQMLK-QGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIG 242

Query: 361 ---------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                                  L   V +++  ++VVSW +M+  ++++G  +E L + 
Sbjct: 243 LRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVF 302

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
            +M  +G   +   ++ +L A  ++    +G+Q H   ++H +  +  + + L+ MY ++
Sbjct: 303 GDMISEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRT 359

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL++    +  K +  + D  +W   I+   QNG  E+A     QM     TPN    +S
Sbjct: 360 GLVEELEAMLNKIE--NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSS 417

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL +C  + +++ G Q H  +++   D  +  G +LI+MYSK G +  A   F  +   +
Sbjct: 418 VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD 477

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
             ++ ++I G+ QHG + +AL +F  M+  GI+PD  TF+ VL  C+++G+V+EG   F 
Sbjct: 478 VTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR 537

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM  +Y   P+  HY C+ DMLGR G+  EA   + ++  E + L IW +LL SC+LH +
Sbjct: 538 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL-IWKTLLASCKLHRN 596

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ++ ++ A +L+E+  R+S    +VL+SNIYA  G WE+  KVR+ M E G++K+ GCSW
Sbjct: 597 LDIGKLAADRLMELSDRDS--ASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEM-------------LERLAMEMRNAGNKTIQ 801
           I++   V+ FAS+D  HP S  IY+M             LE   +E+R+ GN+ ++
Sbjct: 655 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDFDELEPFDIEVRHEGNEVLK 710



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 169/704 (24%), Positives = 312/704 (44%), Gaps = 118/704 (16%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           RL+++ + GR   A  LFD + R   V W +++ G+  N  P  A+ +++ M +S    +
Sbjct: 54  RLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG--VA 111

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            +++  ++ L ACA+   LR G+ VH   +R       ++ + L+ MYS C S   A+  
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK-- 169

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           +VFD M   +VV + +++S + +   +  A      ML+ G++P
Sbjct: 170 ----------------EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKP 213

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  +   +  A   +        ++G L+K        ++ +++ I  Y+  G F  A+ 
Sbjct: 214 NEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKA 269

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQ 342
           +FD+   +N   W +M+  Y+++    EA+++F  ++   +D   F     L A  ++  
Sbjct: 270 VFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG- 328

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTM 382
                LG+QLH   IK+ +   + V NA++                      D+VSW T 
Sbjct: 329 -----LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTA 383

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ISA  QNG  ++ + L+ +M  +GF  +    +++LS+ +++ + D G Q H   L+ G 
Sbjct: 384 ISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGC 443

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             E    + LI+MY+K G + +AR  F+   +   D  +WN++I G+ Q+G   +A   F
Sbjct: 444 DSEICTGNALINMYSKCGQMGSARLAFDVMHT--HDVTSWNSLIHGHAQHGDANKALEVF 501

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLID 556
            +M  + + P+  T   VL  CN  G +E G+       R ++DQ  F         +ID
Sbjct: 502 SKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF----FRLMIDQYSFTPAPSHYACMID 557

Query: 557 MYSKSG-------VIN----------------------------YAANVFAKIPEKNSVT 581
           M  ++G       +IN                             AA+   ++ +++S +
Sbjct: 558 MLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSAS 617

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           Y  M   Y  HG  E A  + R M   G++ DA         CS+  + +E +  F    
Sbjct: 618 YVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA--------GCSWIEINNE-VHTFASRD 668

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYE----FVKELGEEGN 681
             +   P+++    +  MLG +  V++ ++    F  E+  EGN
Sbjct: 669 MSH---PNSDS---IYQMLGELVAVMQDFDELEPFDIEVRHEGN 706



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           KSG +  A ++F ++P KN V +T+++ GY ++G  E AL++F  M   G+ P+     A
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L AC+  G +  G Q+  L  +            C+ +M  R G +  A E    + + 
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRA-GFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM-DS 177

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            +V+     +   CR +G  ELA   A+ L++M  +   P  H + + + A
Sbjct: 178 PDVVGYTSLISAFCR-NGEFELA---AEALIQMLKQGLKPNEHTMTTILTA 224


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 190/552 (34%), Positives = 307/552 (55%), Gaps = 27/552 (4%)

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           AS  I +Y  L     A  +F          W ++I  +   +    A+  FV+ +    
Sbjct: 42  ASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVE-MRASG 100

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------- 372
              D   F S L + + + +L  G+ +H +I++  +   +   NA++             
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVR 160

Query: 373 -------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                   +DVVS+NT+I+ + Q+G+ ++ L +V EM       D+ T++++L   S   
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220

Query: 426 NQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           +   GK+ H Y++R GI  +  + S L+DMYAKS  I+ + ++F  +    RD  +WN++
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF--SHLYRRDSISWNSL 278

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           +AGY QNG   EA   FRQM+   V P  V  +SV+PAC  +  + LGKQLHG+ +R   
Sbjct: 279 VAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 338

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
            +N+F+ ++L+DMYSK G I  A  +F ++   + V++T +I+G+  HG    A+SLF  
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           MK  G++P+ + FVAVL+ACS+ GLVDE    F+ M + Y +    EHY  VAD+LGR G
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 458

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           K+ EAY+F+ ++  E     +W +LL SC +H + ELAE VA+K+  +D+ N   G +VL
Sbjct: 459 KLEEAYDFISKMRVEPTG-SVWSTLLSSCSVHKNLELAEKVAEKIFTIDSEN--MGAYVL 515

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           + N+YA  G W+ + K+R  +R++GLRK+  CSWI++    + F S D+ HP   +I E 
Sbjct: 516 MCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEF 575

Query: 785 LERLAMEMRNAG 796
           L+ +  +M   G
Sbjct: 576 LKAVMEQMEKEG 587



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 268/598 (44%), Gaps = 80/598 (13%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
           M+SS   +      PT      Q  Q+H+       L   +    +S        H A  
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-DNYTYSSVLKACAE 119
           +F ++  P  + W ++I  F   +L   A+  + +M+ S     C D+  + SVLK+C  
Sbjct: 61  VFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASG---RCPDHNVFPSVLKSCTM 117

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +LR G++VH   +R   +   +  N+L+NMYS        +++G+          D V
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYS--------KLLGI----------DSV 159

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            KVF+ M R++VV++NT+++ Y ++  Y +A+R  R M    ++P   +  +V P  S  
Sbjct: 160 RKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEY 219

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            D      ++G +++ G +  +D+++ SS + MYA+    + + ++F +   R++  WN+
Sbjct: 220 VDVLKGKEIHGYVIRKGID--SDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNS 277

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           ++ GYVQN    EA+ LF Q++   ++    V F S + A + L  L LG+QLH Y+++ 
Sbjct: 278 LVAGYVQNGRYNEALRLFRQMVSA-KVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG 336

Query: 360 FVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
                + + +A+++                     D VSW  +I     +G   E + L 
Sbjct: 337 GFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLF 396

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
            EM++QG   + V   A+L+A S+     VG    A+             Y   M    G
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSH-----VGLVDEAW------------GYFNSMTKVYG 439

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           L              +++   + A+     + G LEEA+    +M    V P     +++
Sbjct: 440 L--------------NQELEHYAAVADLLGRAGKLEEAYDFISKM---RVEPTGSVWSTL 482

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           L +C+   N+EL +++    I  +  +N+     + +MY+ +G     A +  ++ +K
Sbjct: 483 LSSCSVHKNLELAEKV-AEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKK 539


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 227/710 (31%), Positives = 362/710 (50%), Gaps = 48/710 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D   +  VLKAC+    +  GK +H   I+   +    + NS+LN Y  C          
Sbjct: 64  DVTLFPPVLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKC---------- 112

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + D    VFD+MR R+ V+WN ++   +     VE + QF      G  P+
Sbjct: 113 --------GELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPN 164

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             + V +  A  SL   +    ++G L++ G        V +S + MYA++   D AR +
Sbjct: 165 ISTLVLLVQACRSLRAKQEGLQLHGYLIQSG--LWASWSVQNSFLCMYADVD-MDCARIL 221

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD   E++   W+ MIGGYVQ       +++F ++L    I  D V  +S L A +    
Sbjct: 222 FDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVN 281

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           + +G+ +H   I   +   + V N++I+                    R+ VSWN+++S 
Sbjct: 282 ITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSG 341

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF- 444
            + N    E L+LVY M+ +G   D VT+   L       +    K  H   +R G    
Sbjct: 342 LILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESN 401

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           E + + LID YAK  LI+ A ++F +     RD   W+ MIAG+   G  +EA   F++M
Sbjct: 402 EIVLNSLIDAYAKCNLIELAWEVFSRTRR--RDVVLWSTMIAGFAHCGKPDEAIAVFQKM 459

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
            E    PN VTI ++L AC+    ++     HG +IR  L   V VGT+++DMYSK G I
Sbjct: 460 NEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEI 519

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             +   F +IP+KN +T++TMI  YG +G++  AL+L   MK   I+P+A+T+++VL+AC
Sbjct: 520 EASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTAC 579

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV-L 683
           S+ GLV+ GL +F  M Q++ + P  EHY C+ DML R GK+ +A E ++ + E      
Sbjct: 580 SHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGA 639

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +WG+LL +CR +  S L E    ++LE++  N + GY +L S++YA +G W+N  +++ 
Sbjct: 640 SVWGALLSACRTYRSSTLGEKAVYQVLELEPLN-LAGY-LLASSMYASDGLWDNAARMKL 697

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             RERG+R   G S + V    ++F + D+   Q+  I+ ML +L   M+
Sbjct: 698 LARERGVRAVAGYSIVHVDSKAHKFVAGDKSCSQAGNIHHMLNQLHFCMK 747



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 251/549 (45%), Gaps = 53/549 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAI--LLYSQMKKSSPYTSCDNYTY 110
           G    A  +FDS+    +V WN +I G +      E +   + +++    P  S    T 
Sbjct: 113 GELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNIS----TL 168

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
             +++AC   R  + G  +H + I+     S  V NS L MY+               V+
Sbjct: 169 VLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYAD--------------VD 214

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISF 229
           +D ++      +FD M  ++V++W+ ++  YV+       ++ F+ ML    I P  +  
Sbjct: 215 MDCARI-----LFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVIL 269

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V+V  A ++  +     +V+GL +  G +  +DLFV +S I MY++      A ++F   
Sbjct: 270 VSVLKACANSVNITMGRLVHGLTICRGLD--SDLFVKNSLIDMYSKCKDAGSAFEVFSEM 327

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-------- 341
             RN   WN+++ G + N    EA+ L V  +  + I  D+VT ++ L            
Sbjct: 328 PRRNNVSWNSLLSGLILNKKYSEAL-LLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHC 386

Query: 342 ------------QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
                       +  E+ L   + AY   N + L   V +    RDVV W+TMI+ F   
Sbjct: 387 KAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHC 446

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G  DE + +  +M +   + ++VT+  LL A S           H   +R G+  E  + 
Sbjct: 447 GKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVG 506

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + ++DMY+K G I+ +R+ F  N    ++  TW+ MIA Y  NGL  EA     QM  H 
Sbjct: 507 TAIVDMYSKCGEIEASRKAF--NQIPQKNIITWSTMIAAYGMNGLAHEALALLAQMKSHE 564

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYA 567
           + PN +T  SVL AC+  G +E+G  +    I+ + +D      + ++DM S++G ++ A
Sbjct: 565 IKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDA 624

Query: 568 ANVFAKIPE 576
             +   +PE
Sbjct: 625 MELIRMMPE 633



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 216/467 (46%), Gaps = 50/467 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD +     + W+ +I G+V        + ++ +M  +S  T  D     SVLKAC
Sbjct: 218 ARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITP-DGVILVSVLKAC 276

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A + N+ +G+ VH   I    +   FV NSL++MYS C  +  A                
Sbjct: 277 ANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGSAF--------------- 321

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  M RRN V+WN+++S  +  ++Y EA+     M   GI    ++ VN      
Sbjct: 322 ---EVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICK 378

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                     V+   ++ G E  ++  V +S I  YA+    + A ++F     R+  +W
Sbjct: 379 YFAHPYHCKAVHCATIRRGCE--SNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLW 436

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           +TMI G+     P EAI +F ++ E  E V + VT ++ L A S   EL      H   I
Sbjct: 437 STMIAGFAHCGKPDEAIAVFQKMNEGIE-VPNAVTIINLLQACSVSAELKRSMWAHGAAI 495

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +  +A  V V  A++                    ++++++W+TMI+A+  NGL  E L 
Sbjct: 496 RRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALA 555

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDM 454
           L+ +M+      +++T  ++L+A S+    ++G      +++ HG+  E  E Y  ++DM
Sbjct: 556 LLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPE-FEHYSCMVDM 614

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAG---YTQNGLLEEA 497
            +++G +  A ++        R  A+ W A+++    Y  + L E+A
Sbjct: 615 LSRAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKA 661



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 189/413 (45%), Gaps = 40/413 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  + R   V WN+++ G + N    EA+LL   M+        D  T  + L+ C
Sbjct: 320 AFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEG--IEADEVTLVNCLQIC 377

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +    KAVHC  IR     +  V NSL++ Y+ C                  +  +
Sbjct: 378 KYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKC------------------NLIE 419

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR-PSTISFVNVFPAL 236
           L  +VF   RRR+VV W+T+++ +    +  EA+  F+ M   GI  P+ ++ +N+  A 
Sbjct: 420 LAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKM-NEGIEVPNAVTIINLLQAC 478

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S   + K +   +G  ++ G     ++ V ++ + MY++ G  + +RK F+   ++N   
Sbjct: 479 SVSAELKRSMWAHGAAIRRG--LAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIIT 536

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+TMI  Y  N    EA+ L  Q ++  EI  + +T+LS L+A S    +++G  +   +
Sbjct: 537 WSTMIAAYGMNGLAHEALALLAQ-MKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSM 595

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
           I++    P          +   ++ M+    + G  D+ + L+  M  + F   +    A
Sbjct: 596 IQDHGVDP----------EFEHYSCMVDMLSRAGKLDDAMELI-RMMPETFRAGASVWGA 644

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
           LLSA    R+  +G++    +L   +    +  YL+   MYA  GL   A ++
Sbjct: 645 LLSACRTYRSSTLGEKAVYQVLE--LEPLNLAGYLLASSMYASDGLWDNAARM 695


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 202/643 (31%), Positives = 333/643 (51%), Gaps = 111/643 (17%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFDTM ++NV  WN +VS Y K                                   +G
Sbjct: 17  RVFDTMEKKNVYLWNFMVSEYAK-----------------------------------IG 41

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D+K +  ++ ++V+ G E                     + A ++FD   +R+   WN+M
Sbjct: 42  DFKESICLFKIMVEKGIEGKRS-----------------ESASELFDKLCDRDVISWNSM 84

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GYV N      + ++ Q++ L  I  D  T +S L   ++   L LG+ +H+  IK+ 
Sbjct: 85  ISGYVSNGLTERGLGIYKQMMYLG-IDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               +   N ++                    ER+VVSW +MI+ + ++G  D  ++L+ 
Sbjct: 144 FERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQ 203

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES------YLIDM 454
           +M+K+G  +D V +T++L A +   + D GK  H Y     I    M S       L+DM
Sbjct: 204 QMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY-----IKANNMASNLFVCNALMDM 258

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G ++ A  +F       +D  +WN M+                       + P+  
Sbjct: 259 YAKCGSMEGANSVFSTMVV--KDIISWNTMVG---------------------ELKPDSR 295

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+A +LPAC  +  +E GK++HG+ +R     +  V  +L+D+Y K GV+  A  +F  I
Sbjct: 296 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 355

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P K+ V++T MI GYG HG    A++ F  M+  GIEPD ++F+++L ACS++GL+++G 
Sbjct: 356 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 415

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           + F +M+ ++ I+P  EHY C+ D+L R G + +AY+F++ L    +   IWG+LL  CR
Sbjct: 416 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA-TIWGALLCGCR 474

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           ++   ELAE VA+++ E++  N+  GY+VLL+NIYAE   WE V ++R+++ ++GLRK  
Sbjct: 475 IYHDIELAEKVAERVFELEPENT--GYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNP 532

Query: 755 GCSWIDVGGYVNRFAS-KDQEHPQSHKIYEMLERLAMEMRNAG 796
           GCSWI++ G VN F S  +  HP S KI  +L+++  +M+  G
Sbjct: 533 GCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG 575



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 142/604 (23%), Positives = 266/604 (44%), Gaps = 116/604 (19%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD +  R+V++WN+++S YV        +  ++ M+ +GI     + ++V    +  G
Sbjct: 68  ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSG 127

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  V+ L +K  S +   +  +++ + MY++ G  D A ++F+   ERN   W +M
Sbjct: 128 TLSLGKAVHSLAIK--SSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 185

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++     AI + +Q +E + +  D V   S L A ++   LD G+ +H YI  N 
Sbjct: 186 IAGYTRDGWSDGAI-ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +A  + V NA+++                    +D++SWNTM+                 
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKP------------ 292

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
                    DS T+  +L A ++L   + GK+ H Y+LR+G   +  + + L+D+Y K G
Sbjct: 293 ---------DSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           ++  AR +F+   S  +D  +W  MIAGY  +G   EA   F +M +  + P+ V+  S+
Sbjct: 344 VLGLARLLFDMIPS--KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 401

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL------IDMYSKSGVINYAANVFAK 573
           L AC+  G +E      G+   Y++  +  +   L      +D+ S++G ++ A      
Sbjct: 402 LYACSHSGLLE-----QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 456

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +P                                  I PDA  + A+L  C     ++  
Sbjct: 457 LP----------------------------------IAPDATIWGALLCGCRIYHDIELA 482

Query: 634 LQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG-------NVLEI 685
            ++    ++ ++++P +T +Y  +A++     K  E     +++G++G       + +EI
Sbjct: 483 EKV---AERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 539

Query: 686 WGS----LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            G     + G+   H HS+  E + KK+     R  M          YA      N D++
Sbjct: 540 KGRVNLFVSGNNSSHPHSKKIESLLKKM-----RRKMKEEGYFPKTKYA----LINADEM 590

Query: 742 RKEM 745
           +KEM
Sbjct: 591 QKEM 594



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 202/457 (44%), Gaps = 69/457 (15%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R   A +LFD +     + WN++I G+V N L    + +Y QM         D  T  SV
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLG--IDVDLATIISV 119

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L  CA++  L +GKAVH   I+          N+LL+MYS C   LD  +          
Sbjct: 120 LVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC-GDLDGAL---------- 168

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  +VF+ M  RNVV+W ++++ Y +      A+   + M + G++   ++  ++ 
Sbjct: 169 -------RVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSIL 221

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +  G   +   V+  +    +   ++LFV ++ + MYA+ G  + A  +F   + ++
Sbjct: 222 HACARSGSLDNGKDVHDYIK--ANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKD 279

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WNTM+G                      E+  D  T    L A + L  L+ G+++H
Sbjct: 280 IISWNTMVG----------------------ELKPDSRTMACILPACASLSALERGKEIH 317

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            YI++N  +    V NA+++                    +D+VSW  MI+ +  +G  +
Sbjct: 318 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 377

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY-- 450
           E +    EM+  G   D V+  ++L A S+    + G +   Y++++  + E  +E Y  
Sbjct: 378 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYAC 436

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           ++D+ +++G +  A +  E       D   W A++ G
Sbjct: 437 MVDLLSRTGNLSKAYKFIETLPIAP-DATIWGALLCG 472



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 54/267 (20%)

Query: 451 LIDMYAKSGLIKTARQIF-----------------------------------EKNDSG- 474
           L+  YA  G +K  R++F                                   EK   G 
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 475 -------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
                        DRD  +WN+MI+GY  NGL E     ++QM+   +  ++ TI SVL 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
            C   G + LGK +H  +I+   ++ +    +L+DMYSK G ++ A  VF K+ E+N V+
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +T+MI GY + G S+ A+ L + M+  G++ D +   ++L AC+ +G +D G  + D ++
Sbjct: 182 WTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIK 241

Query: 642 QEYKIQPSTEHYCCVA--DMLGRVGKV 666
                  ++  + C A  DM  + G +
Sbjct: 242 AN---NMASNLFVCNALMDMYAKCGSM 265


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 235/779 (30%), Positives = 384/779 (49%), Gaps = 111/779 (14%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T T  S +S   + GR   ARQLFD + +   V WN++I  ++ N+   EA  L+ +M  
Sbjct: 46  TVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPT 105

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                      YS  L     TRN  + KA      R   N   + +N +      C ++
Sbjct: 106 RD--------LYSWTLMITCYTRNGELAKA------RNLFNLLPYKWNPV------CCNA 145

Query: 159 LDAEMVGLKYVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           + A           Y+K   +D   ++FD M  +++V+WN++++ Y +       ++ F 
Sbjct: 146 MVA----------GYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFE 195

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM--Y 273
            M    +    +S+  +      +GD  S+   +        E + +    S    +  +
Sbjct: 196 EMAERDV----VSWNLMVDGFVEVGDLNSSWEFF--------EKIPNPNTVSWVTMLCGF 243

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           A  G    AR++FD    RN   WN MI  YVQN H  EAI LF+++ E + I     ++
Sbjct: 244 ARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSI-----SW 298

Query: 334 LSALSAVSQLQELDLGQQL-----------HAYIIKNFVALPVI-----VLNAVIERDVV 377
            + ++   ++ +LD  +QL              +I  +V    +     + N +  RDVV
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVV 358

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
            WNTMI+ + Q G  DE L L  +M K+    D V+   ++++                 
Sbjct: 359 CWNTMIAGYSQCGRMDEALHLFKQMVKK----DIVSWNTMVAS----------------- 397

Query: 438 LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                            YA+ G +  A +IFE  +  +++  +WN++I+G TQNG   +A
Sbjct: 398 -----------------YAQVGQMDAAIKIFE--EMKEKNIVSWNSLISGLTQNGSYLDA 438

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
             +F  M      P+  T A  L +C  +  +++GKQLH   ++     ++FV  +LI M
Sbjct: 439 LKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITM 498

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I+ A  +F  I   + V++ ++I  Y  +G    AL LF  M+  G+ PD +TF
Sbjct: 499 YAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTF 558

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V +LSACS+ GL+D+GL++F  M Q Y I+P  EHY C+ D+LGR G++ EA++ V+ + 
Sbjct: 559 VGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMK 618

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
              N   IWG+LLG+CR+HG+ ELA+  A+KLLE +   +    +VLLSN+ AE G W+ 
Sbjct: 619 INANA-GIWGALLGACRIHGNLELAKFAAEKLLEFEPHKT--SNYVLLSNMQAEAGRWDE 675

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V +VR+ M+E+G  K+ G SWI++   V+ F S+D  HP++ ++  +L  L   MRN  
Sbjct: 676 VARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTA 734



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 164/697 (23%), Positives = 280/697 (40%), Gaps = 130/697 (18%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN--------- 84
           +P+    +  S ++      R   ARQLFD +       W  +I  +  N          
Sbjct: 72  MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLF 131

Query: 85  --LPY---------------------EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
             LPY                     EA  L+  M         D  +++S+L       
Sbjct: 132 NLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK------DLVSWNSMLTGYTRNG 185

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSL--------DAEMVGLKYVEV 171
            +R+G      F    +      +N +++ +     L+S         +   V    +  
Sbjct: 186 EMRLG----LQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLC 241

Query: 172 DYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            ++++  +    ++FD M  RNVVAWN +++ YV+     EA+  F  M       ++IS
Sbjct: 242 GFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSIS 297

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +  V      +G    A  +      L      ++   ++ I  Y +    D AR+IF+ 
Sbjct: 298 WTTVINGYVRMGKLDEARQL------LNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQ 351

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WNTMI GY Q     EA+ LF Q+++ D + ++  T +++ + V Q+     
Sbjct: 352 ISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWN--TMVASYAQVGQMDA--- 406

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
                           + +   + E+++VSWN++IS   QNG   + L     M  +G  
Sbjct: 407 ---------------AIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQK 451

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D  T    LS+ ++L    VGKQ H  +++ G   +  + + LI MYAK G I +A  +
Sbjct: 452 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 511

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+  D    D  +WN++IA Y  NG   EA   F +M    V P+ VT   +L AC+ +G
Sbjct: 512 FK--DIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVG 569

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
                          L+DQ + +   ++  Y+   +  +               Y  M+ 
Sbjct: 570 ---------------LIDQGLKLFKCMVQAYNIEPLAEH---------------YACMVD 599

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE-YKI 646
             G+ G  E A  L R MK   I  +A  + A+L AC   G     L++     ++  + 
Sbjct: 600 LLGRAGRLEEAFQLVRGMK---INANAGIWGALLGACRIHG----NLELAKFAAEKLLEF 652

Query: 647 QP-STEHYCCVADM---LGRVGKVVEAYEFVKELGEE 679
           +P  T +Y  +++M    GR  +V      +KE G E
Sbjct: 653 EPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 689



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 143/317 (45%), Gaps = 35/317 (11%)

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL-----S 419
           + V   +  ++ V+ N+MISAF +NG   +   L   M ++  +  +  + A L      
Sbjct: 35  IKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVE 94

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            A  L ++   +  +++ L            +I  Y ++G +  AR +F        +  
Sbjct: 95  EARQLFDKMPTRDLYSWTL------------MITCYTRNGELAKARNLFNLLPY-KWNPV 141

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
             NAM+AGY +N   +EA    R++ +     ++V+  S+L      G + LG Q     
Sbjct: 142 CCNAMVAGYAKNRQFDEA----RRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQF---- 193

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
              + +++V     ++D + + G +N +   F KIP  N+V++ TM+ G+ + G    A 
Sbjct: 194 FEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEAR 253

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            LF  M       + + + A+++A      VDE + +F  M ++  I  +T     V + 
Sbjct: 254 RLFDQMP----IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTT-----VING 304

Query: 660 LGRVGKVVEAYEFVKEL 676
             R+GK+ EA + + ++
Sbjct: 305 YVRMGKLDEARQLLNQM 321



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 435 AYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +Y+ RH +         I    KSG I  A ++F+      ++  T N+MI+ + +NG +
Sbjct: 13  SYVFRHNLK--------ITQLGKSGQIDEAIKVFQH--MTHKNTVTHNSMISAFAKNGRI 62

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            +A    RQ+ +     N+V+  S++ A      +E  +QL       +  ++++  T +
Sbjct: 63  SDA----RQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQL----FDKMPTRDLYSWTLM 114

Query: 555 IDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           I  Y+++G +  A N+F  +P K N V    M+ GY ++   + A  LF +M       D
Sbjct: 115 ITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPA----KD 170

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +++ ++L+  +  G +  GLQ F+ M +   +      +  + D    VG +  ++EF 
Sbjct: 171 LVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVS-----WNLMVDGFVEVGDLNSSWEFF 225

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL-EMDTRN 716
           +++     V   W ++L  C      ++AE  A++L  +M  RN
Sbjct: 226 EKIPNPNTV--SWVTML--CGFARFGKIAE--ARRLFDQMPIRN 263


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 208/636 (32%), Positives = 351/636 (55%), Gaps = 37/636 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  RN V++ T++  YV++ +  E V  F  + R G   +   F  +   L S+   + A
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++  + KLG E  ++ FV ++ I  YA  G  + AR+ FD    ++   W  M+  Y 
Sbjct: 61  YSLHACIYKLGHE--SNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIKN---- 359
           +N+   ++++LF    E+  + F+    TF   L A   L+   +G+ +H  ++K     
Sbjct: 119 ENDRFQDSLQLFA---EMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM 175

Query: 360 --FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             +V + ++              V   + + DV+ W+ MIS + Q+    E + L  +M+
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMR 235

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGL 460
           +   + +  T  ++L + +++ N  +GKQ H ++L+ G+  +G   + + L+D+YAK G 
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGL--DGNVFVSNALMDVYAKCGR 293

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  + ++F   +  +R++ TWN MI GY Q+G  ++A   ++ MLE  V  + VT +SVL
Sbjct: 294 LDNSMKLFM--ELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVL 351

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +  +ELG Q+H  S++ + D++V VG +LIDMY+K G I  A  VF  + E++ +
Sbjct: 352 RACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEI 411

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++  MI GY  HG+   AL  F+ M+     P+ +TFV++LSACS AGL+D G   F  M
Sbjct: 412 SWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSM 471

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            Q+Y I+P  EHY C+  +LGR G + +A + ++E+  E NV ++W +LLG+C +H   +
Sbjct: 472 VQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNV-KVWRALLGACVIHNDVD 530

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           L  + A+++L++D ++     HVLLSNIYA    W +V  VRK M+ +G++KE G SWI+
Sbjct: 531 LGIMSAQQILQIDPQDE--ATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIE 588

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G V+ F+  D  HP    I  MLE L M+   AG
Sbjct: 589 NQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAG 624



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 238/477 (49%), Gaps = 48/477 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + ARQ FD+I     V W  ++  +  N+   +++ L+++M+      + +++T++ 
Sbjct: 90  GSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVG--FNPNHFTFAG 147

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC       +GK+VH   ++       +V   LL++Y+                   
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTK------------------ 189

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           +   + V +VF+ M + +V+ W+ ++S Y ++ +  EAV  F  M R  + P+  +F +V
Sbjct: 190 FGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +S+ + +    V+  ++K+G +   ++FV+++ + +YA+ G  D + K+F     R
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLD--GNVFVSNALMDVYAKCGRLDNSMKLFMELPNR 307

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WNTMI GYVQ+    +A+ L+  +LE  ++   +VT+ S L A + L  ++LG Q+
Sbjct: 308 NEVTWNTMIVGYVQSGDGDKALSLYKNMLEC-QVQASEVTYSSVLRACASLAAMELGTQI 366

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H+  +K      V+V NA+I                    ERD +SWN MIS +  +GL 
Sbjct: 367 HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLV 426

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY- 450
            E L     MQ+   + + +T  ++LSA SN    D+G+     +++ +GI    ME Y 
Sbjct: 427 GEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE-PCMEHYT 485

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++ +  +SG +  A ++ E+    + +   W A++     +  ++   ++ +Q+L+
Sbjct: 486 CMVWLLGRSGHLDKAVKLIEEIPL-EPNVKVWRALLGACVIHNDVDLGIMSAQQILQ 541



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 204/400 (51%), Gaps = 38/400 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F+ + +   + W+ +I  +  +N   EA+ L+ QM+++  +   + +T++SVL++CA 
Sbjct: 198 RVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA--FVLPNQFTFASVLQSCAS 255

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             NL++GK VHCH ++   + + FV N+L+++Y+ C   LD  M                
Sbjct: 256 IENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKC-GRLDNSM---------------- 298

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            K+F  +  RN V WNT++  YV++    +A+  ++ ML   ++ S +++ +V  A +SL
Sbjct: 299 -KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              +    ++ L +K  + Y  D+ V ++ I MYA+ G    AR +FD   ER+   WN 
Sbjct: 358 AAMELGTQIHSLSLK--TIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNA 415

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI GY  +    EA++ F Q+++  E V + +TF+S LSA S    LD+GQ     ++++
Sbjct: 416 MISGYSMHGLVGEALKAF-QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQD 474

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV-TALL 418
           +   P +            +  M+    ++G  D+ + L+ E+  +     +V V  ALL
Sbjct: 475 YGIEPCM----------EHYTCMVWLLGRSGHLDKAVKLIEEIPLE----PNVKVWRALL 520

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
            A     + D+G  +   +L+     E     L ++YA++
Sbjct: 521 GACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYART 560


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 209/636 (32%), Positives = 351/636 (55%), Gaps = 38/636 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD + R + V+WN++++ +V    + +A R  + M   G+  ST +  +   + ++  
Sbjct: 50  RVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRSAAAAR 109

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    +    VK G   V+++F AS+ + +YA+ G    AR++FD    RNT  WN +
Sbjct: 110 RPELGAQLQSFAVKSG--LVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNAL 167

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY ++  P +A+ELF+++  + E+V DD TF + L+ V       L QQLH  I K  
Sbjct: 168 IAGYAESRKPAQAMELFLEMQRV-ELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYG 226

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL-MLV 399
            AL ++VLNA I                     RD++SWN+M+ A+  +G+DDE +   V
Sbjct: 227 SALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFV 286

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQD-VGKQTHAYLLRHGIHFEGME---SYLIDMY 455
             M++ G   D  + T+++S  S     D  G+  H+ +++ G+  EG+    + +I MY
Sbjct: 287 RMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGL--EGVTHVCNAMIAMY 344

Query: 456 AK---SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            +   + +++ A + F+      +D  +WN+M+ GY+ +GL  +A   FR M   NV+ +
Sbjct: 345 TRFTENCMMEDAYKCFDSLVF--KDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTD 402

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
              +++ L +C+ +  + LG+Q+H   I+     N FV +SLI MYSK G++  A   F 
Sbjct: 403 EFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFE 462

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +  + +SV + +M+ GY QHG ++    LF  M    +  D +TFVA+L+A S+ GLVDE
Sbjct: 463 EADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDE 522

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G +I + M+  YKI    EHY C  D+ GR G++ +A E ++ +  + + + +W +LLG+
Sbjct: 523 GSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAM-VWMTLLGA 581

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+HG+ ELA  VA  L   + R      +VLLS++Y+  G W +   V+K M+ RGL K
Sbjct: 582 CRIHGNMELASDVASHLFVAEPRQH--STYVLLSSMYSGRGMWSDRATVQKVMKNRGLSK 639

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
             G SWI+V   V+ F + D+ HP+  +I++ML  L
Sbjct: 640 VPGWSWIEVKNEVHSFNADDRSHPRMDEIFDMLRML 675



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/611 (25%), Positives = 275/611 (45%), Gaps = 71/611 (11%)

Query: 17  ATPPPP--QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWN 74
           AT P P  QL   +S S P   L                    AR++FD I RP  V WN
Sbjct: 23  ATSPTPWNQLLTAYSASGPGSGLAA------------------ARRVFDEIPRPDAVSWN 64

Query: 75  TIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
           +++   V      +A  L   M       S   +   S L++ A  R   +G  +    +
Sbjct: 65  SLLAAHVAAGAHRDAWRLLKDMHARGLTAS--TFALGSALRSAAAARRPELGAQLQSFAV 122

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           +     + F  ++LL++Y+ C    DA                   +VFD M  RN V+W
Sbjct: 123 KSGLVDNVFSASALLDVYAKCGRLSDAR------------------RVFDGMPVRNTVSW 164

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N +++ Y ++ +  +A+  F  M R+ + P   +F  +   +     Y     ++G + K
Sbjct: 165 NALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAK 224

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            GS     L V ++AI  Y++ G F  +R+IFD    R+   WN+M+G Y  +    EA+
Sbjct: 225 YGSAL--GLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAM 282

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL-GQQLHAYIIKNFVALPVIVLNAVIE 373
             FV+++    +  D  +F S +S  S+    D  G+ +H+ ++K  +     V NA+I 
Sbjct: 283 RFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIA 342

Query: 374 -----------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                                  +D VSWN+M++ +  +GL  + L     M+ +    D
Sbjct: 343 MYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTD 402

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFE 469
              ++A L + S+L    +G+Q H+ +++ G    + + S LI MY+K G++  AR+ FE
Sbjct: 403 EFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFE 462

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           + D G      WN+M+ GY Q+G  +     F +ML+H V  + VT  ++L A +  G +
Sbjct: 463 EADKG--SSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLV 520

Query: 530 ELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMIL 587
           + G + L+    RY +   +      +D+Y ++G ++ A  +   +P + +++ + T++ 
Sbjct: 521 DEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLG 580

Query: 588 GYGQHGMSERA 598
               HG  E A
Sbjct: 581 ACRIHGNMELA 591


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 207/707 (29%), Positives = 373/707 (52%), Gaps = 49/707 (6%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  ++K    +R+  +G+AVH + ++  S    F  N++LN+Y                 
Sbjct: 70  WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLY----------------- 112

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            V +++ DL  KVFD MR RN + W +++  Y++   +  A      M + G   +  + 
Sbjct: 113 -VKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTC 171

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  A SS  D    + ++  ++K G  +  ++FV +S I MY + G FD A K+FD+ 
Sbjct: 172 TVILQACSSPDDRILGEQIHCFVIKSG--FDENVFVGTSLIAMYTKSGFFDVAEKVFDSM 229

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++    N MI  Y +  +  +AIE+F  +L  D     D TF + +S  +    ++ G
Sbjct: 230 GFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLN-DGFEPTDYTFTNIISTCNGDLGVEEG 288

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +QL     K        V NA+I                    E++++SW  +IS + ++
Sbjct: 289 KQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRS 348

Query: 390 GLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           G   + +     +  + G   DS  +TA+L   S+  N ++G Q H ++++ G   +  +
Sbjct: 349 GYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNV 408

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN-GLLEEAFVAFRQMLE 506
            + L+D+YAK   +++AR +F+     ++  A++NA++AG+ ++ G  E+  + F Q+  
Sbjct: 409 ATALVDLYAKCEKLQSARIVFDH--LSNKGIASFNAILAGFLESSGDEEDPMILFNQLRL 466

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V P++VT + +L       ++E G+  H ++++   D N+ V  S+I MY+K G I  
Sbjct: 467 AGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIED 526

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F  +  ++S+++  +I  Y  HG ++++L LF  MK  G +PD  T +A+L AC+Y
Sbjct: 527 AHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTY 586

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GL  +G+ +F+LM+ +Y I+P  EHY C+AD+LGR G + EA + +K      + L +W
Sbjct: 587 SGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTL-LW 645

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +L+  C+LHG+    ++ +K LL++    +  G ++L+SN+YA E   +   KVRK M 
Sbjct: 646 RTLVNVCKLHGNLNFGKLASKHLLDLSPVEA--GSYILVSNMYASEKMSDEAAKVRKVMN 703

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           +   RKE G SWI++   V+ F + D++HP+S +IY  LE L  EM+
Sbjct: 704 DLKFRKEAGSSWIEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/568 (23%), Positives = 269/568 (47%), Gaps = 56/568 (9%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R  LA+++FD +    T+ W ++I G++ +N    A  +   M K     + + +T + +
Sbjct: 117 RLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGE--NFNEHTCTVI 174

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L+AC+   +  +G+ +HC  I+   + + FV  SL+ MY+                    
Sbjct: 175 LQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKS------------------ 216

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
             +D+  KVFD+M  +++   N ++  Y +     +A+  F+ +L  G  P+  +F N+ 
Sbjct: 217 GFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNII 276

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +     +    + GL  K G  ++++  V ++ I MY   G    A ++F +  E+N
Sbjct: 277 STCNGDLGVEEGKQLQGLAFKYG--FLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKN 334

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  +I GY ++ +  +A++ F+ + +   I FD     + L   S    L+LG Q+H
Sbjct: 335 LISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIH 394

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            +++K   A  V V  A+++                    + + S+N +++ F+++  D+
Sbjct: 395 GFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDE 454

Query: 394 EGLMLVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           E  M+++ +++  G   D VT + LLS  +N  + + G+  HAY ++ G      + + +
Sbjct: 455 EDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSV 514

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MYAK G I+ A Q+F  N    RD  +WNA+I+ Y  +G  +++   F +M      P
Sbjct: 515 ISMYAKCGSIEDAHQMF--NIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDP 572

Query: 512 NVVTIASVLPACNPMGNIELGKQLHG-----FSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           +  TI ++L AC   G  + G  L       + I+ LL+        + D+  ++G ++ 
Sbjct: 573 DEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYA----CMADLLGRAGYLSE 628

Query: 567 AANVFAKIP-EKNSVTYTTMILGYGQHG 593
           A ++  + P  K+++ + T++     HG
Sbjct: 629 AMDIIKRSPFPKSTLLWRTLVNVCKLHG 656



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 132/292 (45%), Gaps = 27/292 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  A ++F S++    + W  +I G+  +    +A+  +  +       + D+   ++
Sbjct: 318 GMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELG-INFDSTLLTA 376

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L  C++  NL +G  +H   ++        V  +L+++Y+ C     A +         
Sbjct: 377 ILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARI--------- 427

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVN 231
                    VFD +  + + ++N I++ ++++    E        LR+ G++P  ++F  
Sbjct: 428 ---------VFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSR 478

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NC 289
           +   L++    +     +   VK G  +  ++ VA+S I MYA+ G  + A ++F+  NC
Sbjct: 479 LLSLLANQASLEKGRSFHAYTVKTG--FDTNISVANSVISMYAKCGSIEDAHQMFNIMNC 536

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             R++  WN +I  Y  +    +++ LF + ++      D+ T L+ L A +
Sbjct: 537 --RDSISWNALISAYALHGQAQKSLFLF-EEMKRKGFDPDEFTILAILQACT 585


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 228/761 (29%), Positives = 367/761 (48%), Gaps = 112/761 (14%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           +K CA  R++ I + +H   I      S F+ N LLNMYS C    DA            
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAY----------- 59

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTIS---F 229
                  +VF  +   NV +WNT++S +  + +  EA + F +M  R  +  +++    F
Sbjct: 60  -------RVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYF 112

Query: 230 VN-----VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
            N        A  SLG  K A  ++G   K   ++  D  V +S + MY + G  DFA+K
Sbjct: 113 HNGELEATIKASGSLGYLKLALQLHGFAEKF--DFGIDTCVETSVLDMYIKCGAMDFAQK 170

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF---------------- 328
           +F      +   WN+MI GY +     +A+ELF ++ E D + +                
Sbjct: 171 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 230

Query: 329 --------------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-------- 366
                         + +T+ S LSA + + +L+ G  LHA I++    L V         
Sbjct: 231 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDM 290

Query: 367 ------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                       V + + E + VSW ++I    Q G  +E L+L  +M++     D  T+
Sbjct: 291 YAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTL 350

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK--- 470
             +L    + ++  +G+Q HA+ +  G+     + + L+ MYAK G +  A   FE    
Sbjct: 351 ATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410

Query: 471 -------------NDSGDRDQA-------------TWNAMIAGYTQNGLLEEAFVAFRQM 504
                        + +GD ++A             +WN+M+A Y Q G  EE    + QM
Sbjct: 411 RDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQM 470

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L   V  + +T ++ + AC  +  + LG Q+   + +     NV V  S++ MYS+ G I
Sbjct: 471 LREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQI 530

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F+ I  KN V++  M+ GY Q+G   + + +F  M   G  PD I++V+VLS C
Sbjct: 531 EEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGC 590

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++G V EG   F  M +++ I P +EH+ C+ D+LGR G++ +A   + ++  + N   
Sbjct: 591 SHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNA-A 649

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IWG+LL +CR+HG+++LAE+  K LLE+D     PG + LL+NIY+E G  + V  VRK 
Sbjct: 650 IWGALLAACRIHGNTKLAELAVKNLLELDAEG--PGSYCLLANIYSESGKIQGVTNVRKL 707

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           MR++G+RK  GCSWI+V   V+ F   D  HPQ   ++ ML
Sbjct: 708 MRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 154/622 (24%), Positives = 274/622 (44%), Gaps = 93/622 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSC-----DNYTY 110
           A ++F  I  P    WNT+I GF  +    EA  L+ +M  + S  + S       N   
Sbjct: 58  AYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGEL 117

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY-- 168
            + +KA      L++   +H    +        V  S+L+MY  C +   A+ V  +   
Sbjct: 118 EATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPN 177

Query: 169 --------VEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                   +   YSKY  V K   +F  M  R+ V+WNT++S   +     E +  F  M
Sbjct: 178 PSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEM 237

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
              G RP+++++ +V  A +S+ D +    ++  +V++  E   D++     I MYA+ G
Sbjct: 238 WNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRM--EPCLDVYAGCGLIDMYAKCG 295

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + AR++FD   E N   W ++IGG  Q     EA+ LF Q+ E+  +  D  T  + L
Sbjct: 296 RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV-PVASDQFTLATVL 354

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------------- 372
                 +++ +G+QLHA+ I   +   V V NA++                         
Sbjct: 355 GVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDII 414

Query: 373 --------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                                     ER+V+SWN+M++ ++Q G  +EGL +  +M ++G
Sbjct: 415 SWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREG 474

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              D +T +  +SA ++L    +G Q  A   + G      + + ++ MY++ G I+ A+
Sbjct: 475 VKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQ 534

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F  +    ++  +WNAM+AGY QNG   +    F +ML     P+ ++  SVL  C+ 
Sbjct: 535 KMF--SSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSH 592

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTS--------LIDMYSKSGVINYAANVFAKIPEK 577
            G +  G+        Y L      G S        ++D+  ++G +  A N+  ++P K
Sbjct: 593 SGFVSEGQ-------YYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFK 645

Query: 578 -NSVTYTTMILGYGQHGMSERA 598
            N+  +  ++     HG ++ A
Sbjct: 646 PNAAIWGALLAACRIHGNTKLA 667



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 160/311 (51%), Gaps = 18/311 (5%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   ARQ+FD +T    V W ++I G        EA++L++QM++  P  S D +T ++
Sbjct: 295 GRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV-PVAS-DQFTLAT 352

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA----------E 162
           VL  C   +++ IG+ +H H I    + S  V N+L+ MY+ C     A          +
Sbjct: 353 VLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRD 412

Query: 163 MVGLKYVEVDYSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           ++    +   +S+   V K    FD M  RNV++WN++++ Y++   + E ++ +  MLR
Sbjct: 413 IISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLR 472

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G++   I+F     A + L      + +     KLG  + +++ VA+S + MY+  G  
Sbjct: 473 EGVKTDWITFSTSISACADLAVLILGNQILAQAEKLG--FSSNVSVANSVVTMYSRCGQI 530

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           + A+K+F + + +N   WN M+ GY QN    + IE+F ++L +  +  D ++++S LS 
Sbjct: 531 EEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVP-DQISYVSVLSG 589

Query: 340 VSQLQELDLGQ 350
            S    +  GQ
Sbjct: 590 CSHSGFVSEGQ 600



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           ++   Q G    AR+ FD +     + WN+++  ++      E + +Y QM +    T  
Sbjct: 420 ITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT-- 477

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  T+S+ + ACA+   L +G  +     +   + +  V NS++ MYS C    +A+   
Sbjct: 478 DWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQ--- 534

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K+F ++  +N+V+WN +++ Y +  +  + +  F  ML +G  P 
Sbjct: 535 ---------------KMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPD 579

Query: 226 TISFVNVFPALSSLG 240
            IS+V+V    S  G
Sbjct: 580 QISYVSVLSGCSHSG 594


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 236/768 (30%), Positives = 399/768 (51%), Gaps = 51/768 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLK 115
           AR +FD I    ++ WN+II  +        A  L+S M+K     S   + YT+ S++ 
Sbjct: 229 ARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT 288

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
               + +  +     C   +  +   +  +   L + S  +S         ++   D +K
Sbjct: 289 TACSSVDFGL-----CVLEQMLARVEKSGFLQDLYVSSALVSGF------ARFGLTDDAK 337

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP-STISFVNVF 233
                 +F+ M  RNVV+ N ++   VK ++   A + F  M  + GI   S +  ++ F
Sbjct: 338 -----NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAF 392

Query: 234 PALSSLGD-YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              S L +  +    V+  +++ G    N + + +  + MYA+ G    A  +F+  +E+
Sbjct: 393 SEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 451

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           ++  WN++I G  QN    +A E F ++     +   + T +S LS+ + L  + LG+Q+
Sbjct: 452 DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMP-SNFTLISTLSSCASLGWIMLGEQI 510

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H   +K  +   V V NA++                    E D VSWN++I A   +   
Sbjct: 511 HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 570

Query: 393 -DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
             + +    +M + G+ +  VT   +LSA S+L   +V  Q HA +L++ +  +  + + 
Sbjct: 571 VSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 630

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+  Y K G +    +IF +  S  RD+ +WN+MI+GY  N LL +A      M++    
Sbjct: 631 LLSCYGKCGEMNECEKIFARM-SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQR 689

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            +  T A++L AC  +  +E G ++H   IR  L+ +V VG++L+DMYSK G I+YA+  
Sbjct: 690 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 749

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +P +N  ++ +MI GY +HG  E+AL LF  M   G  PD +TFV VLSACS+ G V
Sbjct: 750 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 809

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG + F  M + Y++ P  EH+ C+ D+LGR GK+ E  +F+  +  + NVL IW ++L
Sbjct: 810 EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVL-IWRTVL 868

Query: 691 GS-CRLHG-HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           G+ CR +G ++EL    A+ LLE++ +N++   +VLL+N+YA    WE+V K R  M+E 
Sbjct: 869 GACCRANGRNTELGRRAAEMLLELEPQNAVN--YVLLANMYASGEKWEDVAKARTAMKEA 926

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++KE GCSW+ +   V+ F + D+ HP+   IY+ L  L  +MR+AG
Sbjct: 927 AVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAG 974



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 183/701 (26%), Positives = 328/701 (46%), Gaps = 75/701 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LFD ++    V W  +I G+  N  P EA   +  M ++      ++Y + S L+AC
Sbjct: 125 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIP--NHYAFGSALRAC 182

Query: 118 AET--RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL-DAEMVGLKYVEVDYS 174
            E+     ++G  +H    +        V N L++MY +CL S  DA             
Sbjct: 183 QESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDAR------------ 230

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI----RPSTISFV 230
                  VFD +  RN ++WN+I+S Y +    V A   F  M + G+    +P+  +F 
Sbjct: 231 ------SVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFG 284

Query: 231 NVFPALSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           ++     S  D+    V+  +L ++  S ++ DL+V+S+ +  +A  G  D A+ IF+  
Sbjct: 285 SLITTACSSVDFGLC-VLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQM 343

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQLQE-LD 347
             RN    N ++ G V+      A ++F ++ +L  I  D  V  LSA S  S L+E   
Sbjct: 344 GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR 403

Query: 348 LGQQLHAYIIK-----NFVAL----------------PVIVLNAVIERDVVSWNTMISAF 386
            G+++HA++I+     N VA+                   V   ++E+D VSWN++IS  
Sbjct: 404 KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 463

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            QN   ++     + M++ G M  + T+ + LS+ ++L    +G+Q H   L+ G+  + 
Sbjct: 464 DQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 523

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN-GLLEEAFVAFRQM 504
            + + L+ +YA++G      ++F      + DQ +WN++I   + +   + +A   F QM
Sbjct: 524 SVSNALLALYAETGCFTECLKVFSLMP--EYDQVSWNSVIGALSDSEASVSQAVKYFLQM 581

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           +      + VT  ++L A + +   E+  Q+H   ++Y L  +  +G +L+  Y K G +
Sbjct: 582 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 641

Query: 565 NYAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           N    +FA++ E ++ V++ +MI GY  + +  +A+ L   M   G   D+ TF  +LSA
Sbjct: 642 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSA 701

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEE 679
           C+    ++ G+++         I+   E    V     DM  + G++  A  F  EL   
Sbjct: 702 CASVATLERGMEV-----HACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF-ELMPL 755

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
            NV   W S++     HGH E       K L++ TR  + G
Sbjct: 756 RNVYS-WNSMISGYARHGHGE-------KALKLFTRMMLDG 788



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 195/415 (46%), Gaps = 43/415 (10%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +V +LF++++ I +Y  +G    A+K+FD    RN   W  +I GY QN  P EA   F 
Sbjct: 102 FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFR 161

Query: 319 QVLELDEIVFDDVTFLSALSAVSQL--QELDLGQQLHAYIIKNFVALPVIVLNAVIE--- 373
            ++     + +   F SAL A  +       LG Q+H  I K      V+V N +I    
Sbjct: 162 DMVRAG-FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 220

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG----FMIDS 411
                             R+ +SWN++IS + + G       L   MQK+G    F  + 
Sbjct: 221 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNE 280

Query: 412 VTVTALLSAASNLRNQDVG----KQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQ 466
            T  +L++ A +  + D G    +Q  A + + G +    + S L+  +A+ GL   A+ 
Sbjct: 281 YTFGSLITTACS--SVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKN 338

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           IFE+   G R+  + N ++ G  +    E A   F +M +  V  N  +   +L A +  
Sbjct: 339 IFEQ--MGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEF 395

Query: 527 GNIE----LGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
             +E     G+++H   IR  L+ N V +G  L++MY+KSG I  A +VF  + EK+SV+
Sbjct: 396 SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS 455

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           + ++I G  Q+  SE A   F  M+  G  P   T ++ LS+C+  G +  G QI
Sbjct: 456 WNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 510



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E  ++LH  SI+Y    N+F+  +LI++Y + G +  A  +F ++  +N VT+  +I GY
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 147

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL--VDEGLQIFDLMQQ 642
            Q+G  + A + FR M   G  P+   F + L AC  +G      G+QI  L+ +
Sbjct: 148 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 202


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 200/650 (30%), Positives = 343/650 (52%), Gaps = 42/650 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEA--VRQFRMMLRMGIRPSTISFVNVFPALSSL 239
           +FD +   +V  +N ++  Y  +     A  +  +R MLR  + P+  +F     A S+L
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            D+     ++   +  G +   DLFV+++ + MY +  C   A  IF     R+   WN 
Sbjct: 139 ADHHCGRAIHRHAIHAGLQ--ADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 300 MIGGYVQNNHPVEAI-ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           M+ GY  +     A+  L    +++  +  +  T ++ L  ++Q   L  G  +HAY I+
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIR 256

Query: 359 --------------NFVALPVIVLN----------------AVIERDVVSWNTMISAFVQ 388
                         + V L   +L+                A+  R+ V+W+ +I  FV 
Sbjct: 257 ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 389 NGLDDEGLMLVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
                +  +L   M  QG   +   ++ + L A ++L +  +G+Q HA L + G+H +  
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + L+ MYAK+GLI  A  +F+  +   +D  +++A+++GY QNG  EEAF+ F++M  
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFD--EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            NV P+  T+ S++PAC+ +  ++ G+  HG  I   L     +  +LIDMY+K G I+ 
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  VF  +P ++ V++ TMI GYG HG+ + A +LF  M   G  PD +TF+ +LSACS+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GLV EG   F +M+  Y + P  EHY C+ D+L R G + EAYEF++ +    +V  +W
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV-RVW 613

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR++ + +L + V++ + E+    +  G  VLLSNIY+  G ++   +VR   +
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGT--GNFVLLSNIYSAAGRFDEAAEVRIIQK 671

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +G +K  GCSWI++ G ++ F   DQ HPQS +IY  L+ + + ++  G
Sbjct: 672 VQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 265/573 (46%), Gaps = 66/573 (11%)

Query: 56  HLAR--QLFDSITRPTTVIWNTIIIGFVCNN--LPYEAILLYSQMKKSSPYTSCDNYTYS 111
           HL+R   LFD I  P    +N +I  +  ++     + + LY +M +     + +NYT+ 
Sbjct: 72  HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFP 129

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
             LKAC+   +   G+A+H H I        FV  +LL+MY  C    DA          
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA--------- 180

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMG-IRPSTISF 229
                     +F TM  R++VAWN +++ Y     Y  AV     M ++M  +RP+  + 
Sbjct: 181 ---------HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTL 231

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKL--------GSEYVNDLFVASSAIFMYAELGCFDF 281
           V + P L+  G       V+   ++          S+  + + + ++ + MYA+ G   +
Sbjct: 232 VALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 291

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD    RN   W+ +IGG+V  +   +A  LF  +L          +  SAL A +
Sbjct: 292 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 351

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L +G+QLHA + K+ V   +   N+++                     +D VS++ 
Sbjct: 352 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           ++S +VQNG  +E  ++  +MQ      D+ T+ +L+ A S+L     G+ +H  ++  G
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  E  + + LIDMYAK G I  +RQ+F    S  RD  +WN MIAGY  +GL +EA   
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 529

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVFVGTSLI 555
           F +M      P+ VT   +L AC+  G +  GK       HG+ +   ++  +     ++
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI----CMV 585

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           D+ S+ G ++ A      +P +  V     +LG
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 6/183 (3%)

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG--LLEEAFVAFRQMLEHNVTPNVVT 515
           SG +  A  +F++  S   D  T+N +I  Y+ +      +    +R+ML H V PN  T
Sbjct: 70  SGHLSRAHHLFDQIPS--PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
               L AC+ + +   G+ +H  +I   L  ++FV T+L+DMY K   +  AA++FA +P
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 576 EKNSVTYTTMILGYGQHGMSERALS--LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            ++ V +  M+ GY  HGM   A++  L   M+   + P+A T VA+L   +  G + +G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 634 LQI 636
             +
Sbjct: 248 TSV 250


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 208/613 (33%), Positives = 327/613 (53%), Gaps = 50/613 (8%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           +VFD M  RN  AWN ++   V   R+ EA++ +  M+  G +     ++  V  A ++L
Sbjct: 99  RVFDGMLTRNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAAL 158

Query: 240 G---------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           G         +   AD+  G+          ++FV  + + M+A+ GC   AR +F++  
Sbjct: 159 GVVEQGRKVQENVEADIARGIAK-------CNVFVQCALVDMFAKCGCLGEARNVFESME 211

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   W  MIGG V     +E + L ++ ++ +    D +   + + A  +++EL  G 
Sbjct: 212 VRDLAAWTAMIGGTVHGGDWLEVMTL-LKRMKSEGFRPDSMILATVIPACGKVKELRTGT 270

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            LH  ++K  V +   VLNA+++                    +DV+SW+T+I+   QN 
Sbjct: 271 ALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNR 330

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMES 449
                + L  EM   G   +S T+ ++L + S LR    GK+ H + LR+G+ H E + S
Sbjct: 331 RYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLAS 390

Query: 450 YLIDMYAKSGLIKTARQIFE---KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            LID Y++ G IK A  +FE   KND         N+MI GY  N   E A    R +L+
Sbjct: 391 ALIDFYSRQGSIKEAEIVFEFTPKND-----LVVSNSMIGGYVVNEDSESALRLLRALLK 445

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+ VT+ SVLP CN    +  GK+LH ++IR+ +     V  +L DMY K G +  
Sbjct: 446 EGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLEL 505

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F  + E+N+VTY T+I   G+HG +E+A  LF  MK  G+ PD +TFVA+LS CS+
Sbjct: 506 AFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSH 565

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            GL+D+GL  +D M ++Y I P  EHY C+ D+  R G++  A+ F+  L +E   +++ 
Sbjct: 566 EGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANL-QEVPEIDVL 624

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
           G LL +CR H   ++AE+VA+++ E +  +  PGYH+LLSNIYA  G W  V ++R  + 
Sbjct: 625 GCLLSACREHNRMDIAELVAERIFEQNPND--PGYHILLSNIYASAGMWSEVTRIRTMIE 682

Query: 747 ERGLRKEVGCSWI 759
           ER L+K  G S I
Sbjct: 683 ERSLKKRTGNSLI 695



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 251/545 (46%), Gaps = 50/545 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +    +  WN +I G V      EA+  Y  M       + D +TY  VLKAC
Sbjct: 97  AVRVFDGMLTRNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVA-DRFTYPPVLKAC 155

Query: 118 AETRNLRIGKAVH----CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A    +  G+ V         R  +  + FV  +L++M++ C    +A            
Sbjct: 156 AALGVVEQGRKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEAR----------- 204

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VF++M  R++ AW  ++   V    ++E +   + M   G RP ++    V 
Sbjct: 205 -------NVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVI 257

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           PA   + + ++   ++G +VK G     D  V ++ + MY +    DFA  +F +   ++
Sbjct: 258 PACGKVKELRTGTALHGCVVKCGVGV--DTCVLNALVDMYCKCARLDFAASLFWSIDHKD 315

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+T+I G+ QN     ++ LF +++    +  +  T  S L ++S+L+    G+++H
Sbjct: 316 VISWSTIIAGHSQNRRYHVSVSLFSEMVA-SGVKPNSTTLASILPSLSELRLFRYGKEIH 374

Query: 354 AYIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNGLDD 393
            + ++N      F+A  +              IV     + D+V  N+MI  +V N   +
Sbjct: 375 CFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSE 434

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLI 452
             L L+  + K+G   D VTV ++L   +       GK+ HAY +RH I     + + L 
Sbjct: 435 SALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALT 494

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G ++ A +IF      +R+  T+N +I+   ++G  E+AF  F  M    V+P+
Sbjct: 495 DMYCKCGCLELAFEIFLLMT--ERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPD 552

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  ++L  C+  G I+ G   +   +R Y +  +    + ++D+YS+SG ++ A +  
Sbjct: 553 KVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFI 612

Query: 572 AKIPE 576
           A + E
Sbjct: 613 ANLQE 617



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 235/500 (47%), Gaps = 48/500 (9%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL--GCFDFARKIFDNCLE 291
           PAL+ +    +A +V G        Y     +A+  +  YA L  G    A ++FD  L 
Sbjct: 55  PALTEVRRLHAALLVRG--------YRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLT 106

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN+  WN +I G V      EA++ +  ++    +V D  T+   L A + L  ++ G++
Sbjct: 107 RNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRK 166

Query: 352 LH----AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
           +     A I +      V V  A+++                    RD+ +W  MI   V
Sbjct: 167 VQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTV 226

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
             G   E + L+  M+ +GF  DS+ +  ++ A   ++    G   H  +++ G+  +  
Sbjct: 227 HGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTC 286

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L+DMY K   +  A  +F   D   +D  +W+ +IAG++QN     +   F +M+ 
Sbjct: 287 VLNALVDMYCKCARLDFAASLFWSID--HKDVISWSTIIAGHSQNRRYHVSVSLFSEMVA 344

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V PN  T+AS+LP+ + +     GK++H FS+R  L+ + F+ ++LID YS+ G I  
Sbjct: 345 SGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKE 404

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF   P+ + V   +MI GY  +  SE AL L R++   G+ PD +T V+VL  C+ 
Sbjct: 405 AEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQ 464

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNV 682
              + +G ++       Y I+ +    C V+    DM  + G +  A+E    + E   V
Sbjct: 465 HSRLLQGKEL-----HAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTV 519

Query: 683 LEIWGSLLGSCRLHGHSELA 702
              + +L+ S   HGH+E A
Sbjct: 520 --TYNTLISSLGKHGHAEQA 537



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 195/437 (44%), Gaps = 38/437 (8%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+  R   A  LF SI     + W+TII G   N   + ++ L+S+M  S      ++ T
Sbjct: 296 CKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASG--VKPNSTT 353

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +S+L + +E R  R GK +HC  +R     S F+ ++L++ YS   S  +AE+      
Sbjct: 354 LASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEI------ 407

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF+   + ++V  N+++  YV  E    A+R  R +L+ G+RP  ++ 
Sbjct: 408 ------------VFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTV 455

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDN 288
           V+V P  +          ++   ++     ++     S+A+  MY + GC + A +IF  
Sbjct: 456 VSVLPLCNQHSRLLQGKELHAYAIR---HNISSCCSVSNALTDMYCKCGCLELAFEIFLL 512

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERNT  +NT+I    ++ H  +A  LF  +++ D +  D VTF++ LS  S    +D 
Sbjct: 513 MTERNTVTYNTLISSLGKHGHAEQAFFLF-DLMKRDGVSPDKVTFVALLSCCSHEGLIDK 571

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G   +  +++++   P          D   ++ ++  + ++G  D     +  +Q+   +
Sbjct: 572 GLCFYDSMLRDYNISP----------DKEHYSCIVDLYSRSGRLDAAWSFIANLQE---V 618

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
            +   +  LLSA       D+ +     +     +  G    L ++YA +G+     +I 
Sbjct: 619 PEIDVLGCLLSACREHNRMDIAELVAERIFEQNPNDPGYHILLSNIYASAGMWSEVTRIR 678

Query: 469 EKNDSGDRDQATWNAMI 485
              +     + T N++I
Sbjct: 679 TMIEERSLKKRTGNSLI 695


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 202/623 (32%), Positives = 326/623 (52%), Gaps = 90/623 (14%)

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
           S +  + F+ ++ +  YA LG    AR++FD    RNT  +N ++    +     +A+ L
Sbjct: 44  SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALAL 103

Query: 317 F------------------------------VQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           F                              +  +  D+ V +  +F SALSA +  +  
Sbjct: 104 FGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163

Query: 347 DLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAF 386
             G+Q+HA + K+      ++   ++              V +A+ ER++VSWN++I+ +
Sbjct: 164 RTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCY 223

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            QNG  DE L L   M K GF+ D VT+ +++SA + L     G+Q H  +++     E 
Sbjct: 224 EQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFRED 283

Query: 447 M--ESYLIDMYAKSGLIKTARQIFEK-------------------NDSGD---------- 475
           M   + L+DMYAK G    A+ +F++                    + GD          
Sbjct: 284 MVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVE 343

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           ++   WN +IA Y  N   EEA   F ++   +V P   T  +VL AC  + N++LG+Q 
Sbjct: 344 KNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQA 403

Query: 536 H------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           H      GF      + +VFVG SL+DMY K+G I+  A VF ++  +++V++  MI+GY
Sbjct: 404 HVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGY 463

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            Q+G ++ AL LF  M      PD++T + VLSAC ++GLV EG + F  M +++ I P+
Sbjct: 464 AQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPT 523

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ D+LGR G + E  E ++ +  E + + +W SLLG+CRLH + ++ E  A KL
Sbjct: 524 RDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAV-LWASLLGACRLHKNIDMGEWAAGKL 582

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            E+D  NS P  +VLLSN+YAE G W +V +VR+ M+ RG+ K+ GCSWI++G  VN F 
Sbjct: 583 FELDPDNSGP--YVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFL 640

Query: 770 SKDQEHPQSHKIYEMLERLAMEM 792
           ++D  HP  ++I++ L  + M+M
Sbjct: 641 ARDNIHPCRNEIHDTLRIIQMQM 663



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 267/611 (43%), Gaps = 114/611 (18%)

Query: 143 FVYNSLLNMYSTCLSSLDAEMV-------------GLKYVEVDYSKYDLVCKVFDTMRRR 189
           F+ N+LL+ Y+   S  DA  V              L        + D    +F  +   
Sbjct: 51  FLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDP 110

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +  ++N +V+   +  R  +A+R    M       +  SF +   A +S    ++ + V+
Sbjct: 111 DQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVH 170

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
            L+ K  S + +D+++ ++ + MYA+    + A+K+FD   ERN   WN++I  Y QN  
Sbjct: 171 ALVTK--SSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGP 228

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ LFV++++ D  V D+VT  S +SA + L     G+Q+H  ++K+      +VLN
Sbjct: 229 VDEALALFVRMMK-DGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287

Query: 370 ----------------------------------------------------AVIERDVV 377
                                                                ++E++VV
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVV 347

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           +WN +I+ +  N  ++E L L   ++++       T   +L+A +NL N  +G+Q H ++
Sbjct: 348 AWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHV 407

Query: 438 LRHGIHFE-GMES------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           L+ G  F+ G ES       L+DMY K+G I    ++FE+  +  RD  +WNAMI GY Q
Sbjct: 408 LKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAA--RDNVSWNAMIVGYAQ 465

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG  ++A + F +ML  N  P+ VT+  VL AC   G ++ G+       RY        
Sbjct: 466 NGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGR-------RYFQ------ 512

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
                 M    G+          IP ++   YT MI   G+ G  +    L  +M    +
Sbjct: 513 -----SMTEDHGI----------IPTRDH--YTCMIDLLGRAGHLKEVEELIENMP---M 552

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-YCCVADMLGRVGKVVEA 669
           EPDA+ + ++L AC     +D G      +   +++ P     Y  +++M   +GK  + 
Sbjct: 553 EPDAVLWASLLGACRLHKNIDMGEWAAGKL---FELDPDNSGPYVLLSNMYAELGKWADV 609

Query: 670 YEFVKELGEEG 680
           +   + +   G
Sbjct: 610 FRVRRSMKHRG 620



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 234/562 (41%), Gaps = 115/562 (20%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P   T +  + LS   + GR   A  LF +I  P    +N ++     +    +A+   
Sbjct: 76  MPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFL 135

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           + M       +   Y+++S L ACA  +  R G+ VH    +       ++  +L++MY+
Sbjct: 136 AAMHADDFVLNA--YSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYA 193

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C    +A+                  KVFD M  RN+V+WN++++ Y +     EA+  
Sbjct: 194 KCERPEEAQ------------------KVFDAMPERNIVSWNSLITCYEQNGPVDEALAL 235

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F  M++ G  P  ++  +V  A + L   +    V+  +VK    +  D+ + ++ + MY
Sbjct: 236 FVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVK-SDRFREDMVLNNALVDMY 294

Query: 274 AELG-------CFDF------------------------ARKIFDNCLERNTEVWNTMIG 302
           A+ G        FD                         A+ +F   +E+N   WN +I 
Sbjct: 295 AKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIA 354

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---N 359
            Y  N+   EA+ LFV+ L+ + +     T+ + L+A + L  L LGQQ H +++K    
Sbjct: 355 TYAHNSEEEEALRLFVR-LKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFR 413

Query: 360 FVALP---VIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           F + P   V V N++++                    RD VSWN MI  + QNG   + L
Sbjct: 414 FDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDAL 473

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
           +L   M       DSVT+  +LSA             H+ L++ G        Y   M  
Sbjct: 474 LLFERMLCSNERPDSVTMIGVLSACG-----------HSGLVKEG------RRYFQSMTE 516

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVT 515
             G+I T            RD  T   MI    + G L+E      +++E+  + P+ V 
Sbjct: 517 DHGIIPT------------RDHYT--CMIDLLGRAGHLKE----VEELIENMPMEPDAVL 558

Query: 516 IASVLPACNPMGNIELGKQLHG 537
            AS+L AC    NI++G+   G
Sbjct: 559 WASLLGACRLHKNIDMGEWAAG 580



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 191/428 (44%), Gaps = 42/428 (9%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  A+++FD++     V WN++I  +  N    EA+ L+ +M K       D  T +SV
Sbjct: 197 RPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVP--DEVTLASV 254

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRF-----VYNSLLNMYSTCLSSLDAEMV---- 164
           + ACA     R G+ VH   ++      RF     + N+L++MY+ C  + +A+ V    
Sbjct: 255 MSACAGLAAGREGRQVHTRMVK----SDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRM 310

Query: 165 GLKYVEVDYSKYDLVCK---------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            ++ V  + S      K         VF  M  +NVVAWN +++ Y       EA+R F 
Sbjct: 311 AIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFV 370

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY----VNDLFVASSAIF 271
            + R  + P+  ++ NV  A ++L + +     +  ++K G  +     +D+FV +S + 
Sbjct: 371 RLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVD 430

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + G      K+F+    R+   WN MI GY QN    +A+ LF ++L  +E   D V
Sbjct: 431 MYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERP-DSV 489

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
           T +  LSA      +  G++    + ++   +P         RD   +  MI    + G 
Sbjct: 490 TMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPT--------RD--HYTCMIDLLGRAGH 539

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
             E   L+  M  +    D+V   +LL A    +N D+G+     L        G    L
Sbjct: 540 LKEVEELIENMPMEP---DAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLL 596

Query: 452 IDMYAKSG 459
            +MYA+ G
Sbjct: 597 SNMYAELG 604


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 187/572 (32%), Positives = 324/572 (56%), Gaps = 32/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  L+ LG ++    F+ +  I   +  G   FAR++FD+        WN +I GY +N
Sbjct: 40  IHARLLVLGLQFSG--FLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           NH  +A+ ++ + ++L  +  D  TF   L A   L  L +G+ +HA + +      V V
Sbjct: 98  NHFQDALLMYSK-MQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFV 156

Query: 368 LNAVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            N +I                      ER +VSW  ++SA+ QNG   E L +  +M+K 
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
               D V + ++L+A + L++ + G+  HA +++ G+  E  +   L  MYAK G + TA
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           + +F+K  S +     WNAMI+GY +NG  ++A   F +M+  +V P+ ++I S + AC 
Sbjct: 277 KILFDKMKSPN--LILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +G++E  + +  +  R     +VF+ ++LIDM++K G +  A +VF +  +++ V ++ 
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI+GYG HG +  A+SL+R+M+  G+ P+ +TF+ +L AC+++G+V EG   F+ M  ++
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRM-ADH 453

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           KI P  +HY C+ D+LGR G + +AYE +K +  +  V  +WG+LL +C+ H H EL + 
Sbjct: 454 KINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGV-TVWGALLSACKKHRHVELGKY 512

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A++L  +D  N+  G++V LSN+YA    W+ V +VR  M+E+GL K+VGCSW++V G 
Sbjct: 513 AAQQLFSIDPSNT--GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +  F   D+ HP+  +I   +E +   ++  G
Sbjct: 571 LEGFRVGDKSHPRYEEIERQVEWIESRLKEGG 602



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 147/562 (26%), Positives = 250/562 (44%), Gaps = 77/562 (13%)

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
           L +    Y       +VFD + R  V  WN I+  Y +   + +A+  +  M    + P 
Sbjct: 59  LIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPD 118

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE---LGCFDFA 282
           + +F ++  A   L   +    V+  + +LG E   D+FV +  I +YA+   LGC   A
Sbjct: 119 SFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFE--ADVFVQNGLIALYAKCRRLGC---A 173

Query: 283 RKIFDN--CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           R +F+     ER    W  ++  Y QN  PVEA+E+F Q+ ++D +  D V  +S L+A 
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD-VKPDCVALVSVLNAF 232

Query: 341 SQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWN 380
           + LQ+L+ G+ +HA ++K                      VA   I+ + +   +++ WN
Sbjct: 233 TCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            MIS + +NG   + + L +EM  +    D++++T+ +SA + + + +  +    Y+ R 
Sbjct: 293 AMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRS 352

Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
               +  + S LIDM+AK G ++ AR +F++  + DRD   W+AMI GY  +G   EA  
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVECARSVFDR--TLDRDVVVWSAMIVGYGLHGQAREAIS 410

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            +R M    V PN VT   +L ACN  G +  G         + ++        +ID+  
Sbjct: 411 LYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLG 470

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           ++G ++ A  V   +P                                  ++P    + A
Sbjct: 471 RAGHLDQAYEVIKCMP----------------------------------VQPGVTVWGA 496

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPS-TEHYCCVADMLGRV---GKVVEAYEFVKE 675
           +LSAC     V+ G       QQ + I PS T HY  ++++        +V E    +KE
Sbjct: 497 LLSACKKHRHVELGKYA---AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553

Query: 676 LGEEGNVLEIWGSLLGSCRLHG 697
            G   +V   W  + G  RL G
Sbjct: 554 KGLNKDVGCSWVEVRG--RLEG 573



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 248/549 (45%), Gaps = 91/549 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
            ARQ+FD + RP    WN II G+  NN   +A+L+YS+M+ +    S D++T+  +LKA
Sbjct: 71  FARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLAR--VSPDSFTFPHLLKA 128

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKYVEVDYS 174
           C    +L++G+ VH    R       FV N L+ +Y+ C     A  V  GL   E    
Sbjct: 129 CGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPE---- 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                         R +V+W  IVS Y +    VEA+  F  M +M ++P  ++ V+V  
Sbjct: 185 --------------RTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLN 230

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L D +    ++  ++K+G E   DL ++ +   MYA+ G    A+ +FD     N 
Sbjct: 231 AFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNT--MYAKCGQVATAKILFDKMKSPNL 288

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +WN MI GY +N    +AI+LF +++  D +  D ++  SA+SA +Q+  L+  + +  
Sbjct: 289 ILWNAMISGYAKNGFAKDAIDLFHEMINKD-VRPDTISITSAISACAQVGSLEQARWMDE 347

Query: 355 YIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y+ ++      F++  +I              V +  ++RDVV W+ MI  +  +G   E
Sbjct: 348 YVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQARE 407

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
            + L   M++ G   + VT   LL A +           H+ ++R G   F  M  + I 
Sbjct: 408 AISLYRAMERDGVHPNDVTFLGLLIACN-----------HSGMVREGWWFFNRMADHKI- 455

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
                                +  Q  +  +I    + G L++A+   + M    V P V
Sbjct: 456 ---------------------NPQQQHYACIIDLLGRAGHLDQAYEVIKCM---PVQPGV 491

Query: 514 VTIASVLPACNPMGNIELGK----QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
               ++L AC    ++ELGK    QL  FSI      N      L ++Y+ + + +  A 
Sbjct: 492 TVWGALLSACKKHRHVELGKYAAQQL--FSID---PSNTGHYVQLSNLYAAARLWDRVAE 546

Query: 570 VFAKIPEKN 578
           V  ++ EK 
Sbjct: 547 VRVRMKEKG 555



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 24/190 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
           G+   A+ LFD +  P  ++WN +I G+  N    +AI L+ +M  K   P    D  + 
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP----DTISI 326

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +S + ACA+  +L   + +  +  R       F+ ++L++M++ C S           VE
Sbjct: 327 TSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGS-----------VE 375

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S       VFD    R+VV W+ ++  Y    +  EA+  +R M R G+ P+ ++F+
Sbjct: 376 CARS-------VFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFL 428

Query: 231 NVFPALSSLG 240
            +  A +  G
Sbjct: 429 GLLIACNHSG 438



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%)

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +Q+H   +   L  + F+ T LI   S  G I +A  VF  +P      +  +I GY ++
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
              + AL ++  M+   + PD+ TF  +L AC
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKAC 129


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 200/650 (30%), Positives = 342/650 (52%), Gaps = 42/650 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEA--VRQFRMMLRMGIRPSTISFVNVFPALSSL 239
           +FD +   +V  +N ++  Y  +     A  +  +R MLR  + P+  +F     A S+L
Sbjct: 79  LFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSAL 138

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            D+     ++   +  G +   DLFV+++ + MY +  C   A  IF     R+   WN 
Sbjct: 139 ADHHCGRAIHRHAIHAGLQ--ADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNA 196

Query: 300 MIGGYVQNNHPVEAI-ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           M+ GY  +     A+  L    +++  +  +  T ++ L  ++Q   L  G  +HAY I+
Sbjct: 197 MLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIR 256

Query: 359 --------------NFVALPVIVLN----------------AVIERDVVSWNTMISAFVQ 388
                         + V L   +L+                A+  R+ V+W+ +I  FV 
Sbjct: 257 ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVL 316

Query: 389 NGLDDEGLMLVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
                +  +L   M  QG   +   ++ + L A ++L +  +G+Q HA L + G+H +  
Sbjct: 317 CSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLT 376

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + L+ MYAK+GLI  A  +F+  +   +D  +++A+++GY QNG  EEAF+ F++M  
Sbjct: 377 AGNSLLSMYAKAGLIDQAIALFD--EMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            NV P+  T+ S++PAC+ +  ++ G+  HG  I   L     +  +LIDMY+K G I+ 
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  VF  +P ++ V++ TMI GYG HG+ + A +LF  M   G  PD +TF+ +LSACS+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           +GLV EG   F +M   Y + P  EHY C+ D+L R G + EAYEF++ +    +V  +W
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADV-RVW 613

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LLG+CR++ + +L + V++ + E+    +  G  VLLSNIY+  G ++   +VR   +
Sbjct: 614 VALLGACRVYKNIDLGKKVSRMIQELGPEGT--GNFVLLSNIYSAAGRFDEAAEVRIIQK 671

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +G +K  GCSWI++ G ++ F   DQ HPQS +IY  L+ + + ++  G
Sbjct: 672 VQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 157/573 (27%), Positives = 265/573 (46%), Gaps = 66/573 (11%)

Query: 56  HLAR--QLFDSITRPTTVIWNTIIIGFVCNN--LPYEAILLYSQMKKSSPYTSCDNYTYS 111
           HL+R   LFD I  P    +N +I  +  ++     + + LY +M +     + +NYT+ 
Sbjct: 72  HLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHR--VAPNNYTFP 129

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
             LKAC+   +   G+A+H H I        FV  +LL+MY  C    DA          
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA--------- 180

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMG-IRPSTISF 229
                     +F TM  R++VAWN +++ Y     Y  AV     M ++M  +RP+  + 
Sbjct: 181 ---------HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTL 231

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKL--------GSEYVNDLFVASSAIFMYAELGCFDF 281
           V + P L+  G       V+   ++          S+  + + + ++ + MYA+ G   +
Sbjct: 232 VALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLY 291

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD    RN   W+ +IGG+V  +   +A  LF  +L          +  SAL A +
Sbjct: 292 ARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACA 351

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L +G+QLHA + K+ V   +   N+++                     +D VS++ 
Sbjct: 352 SLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSA 411

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           ++S +VQNG  +E  ++  +MQ      D+ T+ +L+ A S+L     G+ +H  ++  G
Sbjct: 412 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 471

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  E  + + LIDMYAK G I  +RQ+F    S  RD  +WN MIAGY  +GL +EA   
Sbjct: 472 LASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLGKEATAL 529

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVFVGTSLI 555
           F +M      P+ VT   +L AC+  G +  GK       HG+ +   ++  +     ++
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI----CMV 585

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           D+ S+ G ++ A      +P +  V     +LG
Sbjct: 586 DLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 618



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 6/183 (3%)

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG--LLEEAFVAFRQMLEHNVTPNVVT 515
           SG +  A  +F++  S   D  T+N +I  Y+ +      +    +R+ML H V PN  T
Sbjct: 70  SGHLSRAHHLFDQIPS--PDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYT 127

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
               L AC+ + +   G+ +H  +I   L  ++FV T+L+DMY K   +  AA++FA +P
Sbjct: 128 FPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP 187

Query: 576 EKNSVTYTTMILGYGQHGMSERALS--LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            ++ V +  M+ GY  HGM   A++  L   M+   + P+A T VA+L   +  G + +G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 634 LQI 636
             +
Sbjct: 248 TSV 250


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 246/768 (32%), Positives = 410/768 (53%), Gaps = 61/768 (7%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS-VLKACAET 120
           F  I    +V WN+II  +        A  ++S M+      +   YT+ S V  AC+ T
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT--EYTFGSLVTTACSLT 220

Query: 121 R-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             ++R+ + + C   +       FV + L++ ++             K   + Y++    
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA-------------KSGSLSYAR---- 263

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP-STISFVNVFP--A 235
            KVF+ M  RN V  N ++   V+ +   EA + F  M  M  + P S +  ++ FP  +
Sbjct: 264 -KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVA--SSAIFMYAELGCFDFARKIFDNCLERN 293
           L+     K    V+G ++  G   + D  V   +  + MYA+ G    AR++F    +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTG---LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           +  WN+MI G  QN   +EA+E + + +   +I+    T +S+LS+ + L+   LGQQ+H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERY-KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD- 392
              +K  + L V V NA++                    E D VSWN++I A  ++    
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
            E ++     Q+ G  ++ +T +++LSA S+L   ++GKQ H   L++ I  E   E+ L
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENAL 558

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I  Y K G +    +IF +  +  RD  TWN+MI+GY  N LL +A      ML+     
Sbjct: 559 IACYGKCGEMDGCEKIFSRM-AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +    A+VL A   +  +E G ++H  S+R  L+ +V VG++L+DMYSK G ++YA   F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLV 630
             +P +NS ++ +MI GY +HG  E AL LF +MK  G   PD +TFV VLSACS+AGL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG + F+ M   Y + P  EH+ C+AD+LGR G++ +  +F++++  + NVL IW ++L
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVL-IWRTVL 796

Query: 691 GS-CRLHGH-SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           G+ CR +G  +EL +  A+ L +++  N++   +VLL N+YA  G WE++ K RK+M++ 
Sbjct: 797 GACCRANGRKAELGKKAAEMLFQLEPENAVN--YVLLGNMYAAGGRWEDLVKARKKMKDA 854

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            ++KE G SW+ +   V+ F + D+ HP +  IY+ L+ L  +MR+AG
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 181/707 (25%), Positives = 319/707 (45%), Gaps = 70/707 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V W  I+ G+  N    EA++    M K   ++  + Y + SVL+AC
Sbjct: 55  ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS--NQYAFVSVLRAC 112

Query: 118 AETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            E  ++ I  G+ +H    +        V N L++MY  C+ S+   +     +EV    
Sbjct: 113 QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV---- 168

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                        +N V+WN+I+S Y +      A R F  M   G RP+  +F ++   
Sbjct: 169 -------------KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215

Query: 236 LSSLG--DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
             SL   D +  + +   + K G   + DLFV S  +  +A+ G   +ARK+F+    RN
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSG--LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQLQELDL--GQ 350
               N ++ G V+     EA +LF+ +  + ++  +  V  LS+    S  +E+ L  G+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333

Query: 351 QLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           ++H ++I    V   V + N ++                    ++D VSWN+MI+   QN
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G   E +     M++   +  S T+ + LS+ ++L+   +G+Q H   L+ GI     + 
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-LEEAFVAFRQMLEH 507
           + L+ +YA++G +   R+IF  +   + DQ +WN++I    ++   L EA V F      
Sbjct: 454 NALMTLYAETGYLNECRKIF--SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
               N +T +SVL A + +   ELGKQ+HG +++  +        +LI  Y K G ++  
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571

Query: 568 ANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
             +F+++ E +++VT+ +MI GY  + +  +AL L   M   G   D+  +  VLSA + 
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNV 682
              ++ G+++         ++   E    V     DM  + G++  A  F   +    + 
Sbjct: 632 VATLERGMEV-----HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNI 728
              W S++     HG  E     A KL E M      P  HV    +
Sbjct: 687 --SWNSMISGYARHGQGE----EALKLFETMKLDGQTPPDHVTFVGV 727



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 38/408 (9%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+++ ++ I  Y E G    ARK+FD    RN   W  ++ GY +N    EA+ +F++ +
Sbjct: 35  DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VFLRDM 93

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDL--GQQLHAYIIKNFVALPVIVLNAVIE------ 373
             + I  +   F+S L A  ++  + +  G+Q+H  + K   A+  +V N +I       
Sbjct: 94  VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153

Query: 374 ---------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          ++ VSWN++IS + Q G       +   MQ  G      T  +L+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213

Query: 419 SAASNLRNQDVG--KQTHAYLLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           + A +L   DV   +Q    + + G+    F G  S L+  +AKSG +  AR++F + ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG--SGLVSAFAKSGSLSYARKVFNQMET 271

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTP-NVVTIASVLPACNPMGNIEL 531
             R+  T N ++ G  +    EEA   F  M    +V+P + V + S  P  +    + L
Sbjct: 272 --RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL 329

Query: 532 --GKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
             G+++HG  I   L+D  V +G  L++MY+K G I  A  VF  + +K+SV++ +MI G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
             Q+G    A+  ++SM+   I P + T ++ LS+C+       G QI
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 59/418 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F  +T   +V WN++I G   N    EA+  Y  M++        ++T  S L +C
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG--SFTLISSLSSC 425

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  +  ++G+ +H   ++   + +  V N+L+ +Y+                E  Y   +
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA----------------ETGY--LN 467

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYV-EAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              K+F +M   + V+WN+I+    ++ER + EAV  F    R G + + I+F +V  A+
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SSL   +    ++GL +K  +   ++    ++ I  Y + G  D   KIF    ER   V
Sbjct: 528 SSLSFGELGKQIHGLALK--NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585

Query: 297 -WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+MI GY+ N    +A++L   +L+  + + D   + + LSA + +  L+ G ++HA 
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHAC 644

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            ++  +   V+V +A+++                    R+  SWN+MIS + ++G  +E 
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704

Query: 396 LMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGM-ESY 450
           L L   M+  G    D VT   +LSA S           HA LL  G  HFE M +SY
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHFESMSDSY 751



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           LD++V++  +LI+ Y ++G    A  VF ++P +N V++  ++ GY ++G  + AL   R
Sbjct: 32  LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVD--EGLQIFDLM 640
            M   GI  +   FV+VL AC   G V    G QI  LM
Sbjct: 92  DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 230/731 (31%), Positives = 382/731 (52%), Gaps = 55/731 (7%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA+ LY +++ S    S D +   S+LKAC+ T +  +G A+H   I+     S  + NS
Sbjct: 30  EALQLYHEIRISGAQLS-DTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANS 87

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
            ++ Y             +KY ++D ++     + FD+ + ++ V+WN +V         
Sbjct: 88  TIDFY-------------MKYGDLDSAQ-----RAFDSTKNKDSVSWNVMVHGNFSNGSI 129

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           +  +  F        +P+  S + V  A   L  Y      +G + + G   +  L V +
Sbjct: 130 MAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAI--LSVQN 187

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           S + +YAE+  + FA K+F     RN  V W+ MIGG+VQ     +   +F  ++    I
Sbjct: 188 SLLSLYAEVHMY-FAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGI 246

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             D VT +S L A + L+++ LG  +H  +I   +   + V N++I              
Sbjct: 247 PPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFK 306

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 E++++SWN M+SA++ N    E L L+  M ++G   D VT+  +L  A +  +
Sbjct: 307 AFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLD 366

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYL---IDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
               +  H  ++R G  +E  E  L   ID YAK  L++ AR +F+  +   +D   W+ 
Sbjct: 367 SLKCRSVHGVIIRKG--YESNELLLNSVIDAYAKCNLVELARMVFDGMN--KKDVVAWST 422

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIAG+ +NG  +EA   F+QM E  V PN V+I +++ AC     +   K  HG ++R  
Sbjct: 423 MIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRG 481

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L   V +GTS+IDMYSK G I  +   F +IP+KN V ++ MI  +  +G++  AL LF 
Sbjct: 482 LASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFE 541

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            +K  G +P+A+T +++LSACS+ GL++EGL  F  M Q++ I+P  EHY C+ DML R 
Sbjct: 542 KIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRA 601

Query: 664 GKVVEAYEFVKELGEEGNV-LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
           GK  EA E +++L +E      IWG+LL SCR +G+  L    A ++L+++  +S  GY 
Sbjct: 602 GKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSS-AGY- 659

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           +L SN+YA  G   +  K+R+  +E+G++   G S + +     RF + D  +P++ +IY
Sbjct: 660 MLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIY 719

Query: 783 EMLERLAMEMR 793
            M+++L   M+
Sbjct: 720 LMVKKLHGVMK 730



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 263/545 (48%), Gaps = 53/545 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++ FDS     +V WN ++ G   N      +  +  +K    +   +  +   V++A 
Sbjct: 101 AQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWF--IKGRFAHFQPNISSLLLVIQAF 158

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E +    G A H +  R   +    V NSLL++Y+      +  M         Y  Y 
Sbjct: 159 RELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYA------EVHM---------YFAY- 202

Query: 178 LVCKVFDTMRRRN-VVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPA 235
              K+F  M  RN VV+W+ ++  +V+     +    FR M+   GI P  ++ V+V  A
Sbjct: 203 ---KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF--ARKIFDNCLERN 293
            ++L D     +V+GL++  G E  +DLFV +S I MY++  CF+   A K F    E+N
Sbjct: 260 CTNLKDISLGTMVHGLVIFRGLE--DDLFVGNSLIDMYSK--CFNVHSAFKAFKEIPEKN 315

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVL----ELDEIVFDDVT-----FLSALSAVS--- 341
              WN M+  Y+ N   +EA+ L   ++    E DE+   +V      FL +L   S   
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 342 -------QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
                  +  EL L   + AY   N V L  +V + + ++DVV+W+TMI+ F +NG  DE
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            + +  +M ++  + ++V++  L+ A +        K  H   +R G+  E  + + +ID
Sbjct: 436 AISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIID 494

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I+ + + F  N    ++   W+AMI+ +  NGL  EA + F ++ ++   PN 
Sbjct: 495 MYSKCGDIEASIRAF--NQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNA 552

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT  S+L AC+  G IE G       + ++ ++  +   + ++DM S++G  N A  +  
Sbjct: 553 VTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIE 612

Query: 573 KIPEK 577
           K+P++
Sbjct: 613 KLPKE 617



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 186/410 (45%), Gaps = 43/410 (10%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H A + F  I     + WN ++  ++ N    EA+ L   M +       D  T ++VL+
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEK--DEVTLANVLQ 359

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
                 +    ++VH   IR     +  + NS+++ Y+ C                  + 
Sbjct: 360 IAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKC------------------NL 401

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            +L   VFD M +++VVAW+T+++ + +  +  EA+  F+ M    + P+ +S +N+  A
Sbjct: 402 VELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEA 460

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +   + + +   +G+ V+ G    +++ + +S I MY++ G  + + + F+   ++N  
Sbjct: 461 CAVSAELRQSKWAHGIAVRRG--LASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVV 518

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI  +  N    EA+ LF ++ + +    + VT LS LSA S    ++ G      
Sbjct: 519 CWSAMISAFRINGLAHEALMLFEKIKQ-NGTKPNAVTALSLLSACSHGGLIEEGLSFFTS 577

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +++             IE  +  ++ ++    + G  +E L L+ ++ K+     S+  T
Sbjct: 578 MVQKH----------GIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGT 627

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES--YLI--DMYAKSGLI 461
            LLS+  +  N  +G    + +L+     E + S  Y++  ++YA  GL+
Sbjct: 628 -LLSSCRSYGNISLGSGAASRVLQ----LEPLSSAGYMLASNLYANCGLM 672


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 207/636 (32%), Positives = 346/636 (54%), Gaps = 40/636 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIR--PSTISFVNVFPALS 237
           ++FD M +R+ ++W TI+S YV      EA+  F +M +  G+   P  +S      AL 
Sbjct: 22  QLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSL-----ALK 76

Query: 238 SLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           + G   S    + ++G  VK  +++VN +FV S+ + MY ++G  D    +F     RN 
Sbjct: 77  ACGLNMSVSFGESLHGYSVK--TDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNV 134

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W  +I G V+  +  EA+  F   + + ++  D  TF SAL A +    L+ G+++H 
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSD-MWIQKVGCDTYTFSSALKACADSGALNYGREIHC 193

Query: 355 YIIKN-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
             +K  F A+  +                   +  ++ +RDVVSW T+I + VQ G ++ 
Sbjct: 194 QTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEEN 253

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
            +     M++     +  T  A++S  + L   + G+Q HA+++R G +    + + ++ 
Sbjct: 254 AVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMA 313

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K   +  A  +F+      RD  +W+ MI+GY Q G  EEAF     M      PN 
Sbjct: 314 MYSKCWQLDLASTVFQ--GLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNE 371

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
              ASVL  C  M  +E GKQLH   +   L+QN  V ++LI+MYSK G I  A+ +F +
Sbjct: 372 FAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDE 431

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
               N V++T MI GY +HG S+ A+ LF+ +   G+ PD++TF+AVL+ACS+AGLVD G
Sbjct: 432 AEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLG 491

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
              F+ + + ++I PS +HY C+ D+L R G++ +A   ++ +  + + + +W +LL +C
Sbjct: 492 FHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDV-VWSTLLRAC 550

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R+HG  +  +  A+K+L++D   ++   H+ L+N+YA +G W+   +VRK M+ +G+ KE
Sbjct: 551 RIHGDVDCGKRAAEKILQLDPNCAVT--HITLANMYAAKGKWKEAAEVRKMMKSKGVVKE 608

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
            G SWI     V+ F S D+ HP+   IY++L+ LA
Sbjct: 609 PGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLA 644



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 283/574 (49%), Gaps = 53/574 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L  + + G  + ARQLFD + +   + W TII G+V      EA+ L+S+M    P    
Sbjct: 8   LKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKM-WVEPGLHM 66

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D +  S  LKAC    ++  G+++H + ++     S FV ++L++MY             
Sbjct: 67  DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMY------------- 113

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                +   K D  C VF  M  RNVV+W  I++  V+     EA+  F  M    +   
Sbjct: 114 -----MKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCD 168

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           T +F +   A +  G       ++   +K G   V+  FVA++   MY + G  D+  ++
Sbjct: 169 TYTFSSALKACADSGALNYGREIHCQTLKKGFTAVS--FVANTLATMYNKCGKLDYGLRL 226

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F++  +R+   W T+I   VQ      A++ F ++ E D +  ++ TF + +S  + L  
Sbjct: 227 FESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETD-VSPNEFTFAAVISGCATLGR 285

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           ++ G+QLHA++I+  +   + V N+++                     RD++SW+TMIS 
Sbjct: 286 IEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISG 345

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + Q G  +E    +  M+++G   +     ++LS   N+   + GKQ HA++L  G+   
Sbjct: 346 YAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQN 405

Query: 446 GM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            M +S LI+MY+K G IK A +IF++ +    +  +W AMI GY ++G  +EA   F+++
Sbjct: 406 TMVQSALINMYSKCGSIKEASKIFDEAEY--NNIVSWTAMINGYAEHGYSQEAIDLFKKL 463

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS----IRYLLDQNVFVGTSLIDMYSK 560
            +  + P+ VT  +VL AC+  G ++LG   H F+    +  +       G  +ID+  +
Sbjct: 464 PKVGLRPDSVTFIAVLAACSHAGLVDLG--FHYFNSLSKVHQICPSKDHYGC-MIDLLCR 520

Query: 561 SGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG 593
           +G +N A ++   +P +++ V ++T++     HG
Sbjct: 521 AGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHG 554



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 220/465 (47%), Gaps = 36/465 (7%)

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + AR++FD  L+R+   W T+I GYV   +  EA+ LF ++     +  D      A
Sbjct: 15  GHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLA 74

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDV 376
           L A      +  G+ LH Y +K      V V +A+++                    R+V
Sbjct: 75  LKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNV 134

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSW  +I+  V+ G + E L    +M  Q    D+ T ++ L A ++    + G++ H  
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQ 194

Query: 437 LLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            L+ G      + + L  MY K G +    ++FE      RD  +W  +I    Q G  E
Sbjct: 195 TLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMT--QRDVVSWTTIIMSNVQIGQEE 252

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
            A  AFR+M E +V+PN  T A+V+  C  +G IE G+QLH   IR  L  ++ V  S++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MYSK   ++ A+ VF  +  ++ ++++TMI GY Q G  E A      M+  G  P+  
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372

Query: 616 TFVAVLSACSYAGLVDEGLQIFDL-----MQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            F +VLS C    ++++G Q+        ++Q   +Q +      + +M  + G + EA 
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSA------LINMYSKCGSIKEAS 426

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           +   E  E  N++  W +++     HG+S+ A  + KKL ++  R
Sbjct: 427 KIFDE-AEYNNIVS-WTAMINGYAEHGYSQEAIDLFKKLPKVGLR 469



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 234/541 (43%), Gaps = 80/541 (14%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  +     V W  II G V      EA+  +S M        CD YT+SS LKACA++
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQK--VGCDTYTFSSALKACADS 182

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
             L  G+ +HC  ++       FV N+L  MY+ C                   K D   
Sbjct: 183 GALNYGREIHCQTLKKGFTAVSFVANTLATMYNKC------------------GKLDYGL 224

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F++M +R+VV+W TI+   V+  +   AV+ FR M    + P+  +F  V    ++LG
Sbjct: 225 RLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLG 284

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +  + ++  +++ G   V+ L VA+S + MY++    D A  +F     R+   W+TM
Sbjct: 285 RIEWGEQLHAHVIRRG--LVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTM 342

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY Q     EA + ++  +  +    ++  F S LS    +  L+ G+QLHA+++   
Sbjct: 343 ISGYAQGGCGEEAFD-YLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVG 401

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +    +V +A+I                      ++VSW  MI+ + ++G   E + L  
Sbjct: 402 LEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFK 461

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL 460
           ++ K G   DSVT  A+L+A S           HA L+  G H           Y  S  
Sbjct: 462 KLPKVGLRPDSVTFIAVLAACS-----------HAGLVDLGFH-----------YFNS-- 497

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +    QI    D        +  MI    + G L +A    + M       + V  +++L
Sbjct: 498 LSKVHQICPSKDH-------YGCMIDLLCRAGRLNDAESMIQSM---PFQRDDVVWSTLL 547

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVG-TSLIDMYSKSGVINYAANVFAKIPEKNS 579
            AC   G+++ GK+     ++  LD N  V   +L +MY+  G    AA V   +  K  
Sbjct: 548 RACRIHGDVDCGKRAAEKILQ--LDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGV 605

Query: 580 V 580
           V
Sbjct: 606 V 606


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 220/679 (32%), Positives = 360/679 (53%), Gaps = 67/679 (9%)

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           KA+  H      + +  V+NS+    S    S +A + G     +  +K+ L   +FD M
Sbjct: 51  KAISSHMRNGHCDSALRVFNSMPRRSSV---SYNAMISGY----LRNAKFSLARDLFDKM 103

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
             R++ +WN +++ YV+  R  EA + F +M +  +    +S+  +    +  G    A 
Sbjct: 104 PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV----VSWNAMLSGYAQNGFVDEAR 159

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGY 304
            V+  +    S   N L  A      Y   G    AR++F++  + N E+  WN ++GGY
Sbjct: 160 EVFNKMPHRNSISWNGLLAA------YVHNGRLKEARRLFES--QSNWELISWNCLMGGY 211

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
           V+ N   +A +LF ++      V D +++ + +S  +Q+ +L   ++L       F   P
Sbjct: 212 VKRNMLGDARQLFDRM-----PVRDVISWNTMISGYAQVGDLSQAKRL-------FNESP 259

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
           +        RDV +W  M+S +VQNG+ DE      EM  +    + ++  A+L+     
Sbjct: 260 I--------RDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEISYNAMLA----- 302

Query: 425 RNQDVGKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
                G   +  ++  G  FE M        + +I  Y ++G I  AR++F+      RD
Sbjct: 303 -----GYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQ--RD 355

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +W A+I+GY QNG  EEA   F +M     + N  T +  L  C  +  +ELGKQ+HG
Sbjct: 356 CVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHG 415

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
             ++   +   FVG +L+ MY K G  + A +VF  I EK+ V++ TMI GY +HG   +
Sbjct: 416 QVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQ 475

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           AL LF SMK  G++PD IT V VLSACS++GL+D G + F  M ++Y ++P+++HY C+ 
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMI 535

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G++ EA   ++ +  +      WG+LLG+ R+HG++EL E  A+ + +M+ +NS
Sbjct: 536 DLLGRAGRLEEAENLMRNMPFDPGAAS-WGALLGASRIHGNTELGEKAAEMVFKMEPQNS 594

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             G +VLLSN+YA  G W +V K+R +MRE G++K  G SW++V   ++ F+  D  HP+
Sbjct: 595 --GMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPE 652

Query: 778 SHKIYEMLERLAMEMRNAG 796
             +IY  LE L ++MR  G
Sbjct: 653 KDRIYAFLEELDLKMRREG 671



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 142/586 (24%), Positives = 240/586 (40%), Gaps = 106/586 (18%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +  + +S   +  +  LAR LFD +       WN ++ G+V N    EA  L+
Sbjct: 72  MPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF 131

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACA------ETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
             M K       D  +++++L   A      E R +   K  H + I      + +V+N 
Sbjct: 132 DLMPKK------DVVSWNAMLSGYAQNGFVDEAREV-FNKMPHRNSISWNGLLAAYVHNG 184

Query: 148 LLNMYSTCLSSL-DAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVK 203
            L        S  + E++    +   Y K +++    ++FD M  R+V++WNT++S Y +
Sbjct: 185 RLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQ 244

Query: 204 TERYVEAVRQFRM---------------MLRMGIRPSTISFVNVFPALS--SLGDYKSAD 246
                +A R F                  ++ G+      + +  P  +  S     +  
Sbjct: 245 VGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGY 304

Query: 247 VVYGLLVKLGSEY----VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           V Y  +V  G  +      ++   ++ I  Y + G    ARK+FD   +R+   W  +I 
Sbjct: 305 VQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIIS 364

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GY QN H  EA+ +FV+ ++ D    +  TF  ALS  + +  L+LG+Q+H  ++K    
Sbjct: 365 GYAQNGHYEEALNMFVE-MKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFE 423

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
               V NA++                    E+DVVSWNTMI+ + ++G   + L+L   M
Sbjct: 424 TGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESM 483

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIK 462
           +K G   D +T+  +LSA S+                                  SGLI 
Sbjct: 484 KKAGVKPDEITMVGVLSACSH----------------------------------SGLID 509

Query: 463 TARQIFEKNDSGDRD------QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
              + F    S DRD         +  MI    + G LEEA    R M      P   + 
Sbjct: 510 RGTEYFY---SMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNM---PFDPGAASW 563

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            ++L A    GN ELG++      + +  QN  +   L ++Y+ SG
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFK-MEPQNSGMYVLLSNLYAASG 608



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 55/467 (11%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+   + AI  +   G  D A ++F++   R++  +N MI GY++N     A +LF ++ 
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 322 ELDEIVFDDVTFLSALSAVSQLQE----LDL---------GQQLHAYIIKNFVALPVIVL 368
           E D  +F     L+      +L E     DL            L  Y    FV     V 
Sbjct: 105 ERD--LFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVF 162

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLV-----YEMQKQGFMIDSVTVTALLSAASN 423
           N +  R+ +SWN +++A+V NG   E   L      +E+     ++       +L  A  
Sbjct: 163 NKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQ 222

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           L ++          +R  I +  M    I  YA+ G +  A+++F  N+S  RD  TW A
Sbjct: 223 LFDR--------MPVRDVISWNTM----ISGYAQVGDLSQAKRLF--NESPIRDVFTWTA 268

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRY 542
           M++GY QNG+++EA   F +M       N ++  ++L      G ++  K  + G     
Sbjct: 269 MVSGYVQNGMVDEARKYFDEM----PVKNEISYNAMLA-----GYVQYKKMVIAGELFEA 319

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           +  +N+    ++I  Y ++G I  A  +F  +P+++ V++  +I GY Q+G  E AL++F
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMF 379

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD-MLG 661
             MK  G   +  TF   LS C+    ++ G Q+   +     ++   E  C V + +LG
Sbjct: 380 VEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV-----VKAGFETGCFVGNALLG 434

Query: 662 ---RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
              + G   EA +  + + EE +V+  W +++     HG    A V+
Sbjct: 435 MYFKCGSTDEANDVFEGI-EEKDVVS-WNTMIAGYARHGFGRQALVL 479



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 31/230 (13%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  + ++   Q G    AR+LFD + +   V W  II G+  N    EA
Sbjct: 316 LFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEA 375

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + ++ +MK+     S +  T+S  L  CA+   L +GK VH   ++       FV N+LL
Sbjct: 376 LNMFVEMKRDGE--SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALL 433

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MY  C S+ +A                    VF+ +  ++VV+WNT+++ Y +     +
Sbjct: 434 GMYFKCGSTDEAN------------------DVFEGIEEKDVVSWNTMIAGYARHGFGRQ 475

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
           A+  F  M + G++P  I+ V V  A S  G           L+  G+EY
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSHSG-----------LIDRGTEY 514



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 12/164 (7%)

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           D D  TWN  I+ + +NG  + A   F  M   +       I+  L          L + 
Sbjct: 43  DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRN----AKFSLARD 98

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           L       + ++++F    ++  Y ++  +  A  +F  +P+K+ V++  M+ GY Q+G 
Sbjct: 99  L----FDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGF 154

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            + A  +F  M       ++I++  +L+A  + G + E  ++F+
Sbjct: 155 VDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLKEARRLFE 194



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D ++      I  + ++G  + A  VF  +P ++SV+Y  MI GY ++     A  LF  
Sbjct: 43  DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           M     E D  ++  +L+       + E  ++FDLM ++
Sbjct: 103 MP----ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK 137


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 230/723 (31%), Positives = 384/723 (53%), Gaps = 66/723 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK-- 115
           +R+LFD + +     WN I+  +   +   +A +L+++M + +  +   N   S++ +  
Sbjct: 59  SRRLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSW--NTLISALTRNG 116

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC    ++  G+  H   I+   + + +V N+LL MY+ C    DA              
Sbjct: 117 ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDA-------------- 162

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                + F  +   N V++  ++     +++  EA R FR+MLR  I   ++S  +V   
Sbjct: 163 ----IQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGV 218

Query: 236 LSSLG----------DYKSADV----VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
            S  G          D  S+DV    V+ L +K G E  +DL + +S + MYA+ G  D 
Sbjct: 219 CSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFE--SDLHLNNSLLDMYAKNGNMDS 276

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A  IF N  E +   WN MI GY Q +   +AIE ++Q ++      D++T+++ L A  
Sbjct: 277 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE-YLQRMQYHGFEPDEITYVNMLVACI 335

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
           +  +++ G+Q+                + +    + SWNT++S + QN    E + L  E
Sbjct: 336 KSGDIEAGRQM---------------FDGMSSPSLSSWNTILSGYSQNENHKEAVKLFRE 380

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY----LLRHGIHFEGMESYLIDMYAK 457
           MQ +    D  T+  +LS+ + +   + G+Q HA     + R  I+   + S LI MY+K
Sbjct: 381 MQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIY---LASGLIGMYSK 437

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G ++ A++IF++    + D   WN+M+AG + N L +EAF  F++M E  + P+  + A
Sbjct: 438 CGKVEMAKRIFDR--IAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYA 495

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +VL  C  + ++  G+Q+H    R     + FVG++LIDMYSK G ++ A  VF  +  K
Sbjct: 496 TVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGK 555

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           N+VT+  MI GY Q+G  + A+ L+  M G G +PD ITFVAVL+ACS++GLVD G++IF
Sbjct: 556 NTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIF 615

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           + MQQE+ ++P  +HY C+ D LGR G++ EA   + ++  + + + IW  LL SCR++ 
Sbjct: 616 NSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPI-IWEVLLSSCRVYA 674

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
              LA   A++L  +D +NS P  +VLL+NIY+  G W++   VR+ M    + K+ G S
Sbjct: 675 DVSLARRAAEELFHLDPQNSAP--YVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYS 732

Query: 758 WID 760
           WI+
Sbjct: 733 WIE 735



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 149/330 (45%), Gaps = 28/330 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q  Q H   P        T  + L    + G     RQ+FD ++ P+   WNTI+ G+  
Sbjct: 313 QRMQYHGFEP-----DEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQ 367

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N    EA+ L+ +M+  S +   D  T + +L + A    L  G+ VH    +       
Sbjct: 368 NENHKEAVKLFREMQFRSVHP--DRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDI 425

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           ++ + L+ MYS C                   K ++  ++FD +   ++V WN++++   
Sbjct: 426 YLASGLIGMYSKC------------------GKVEMAKRIFDRIAELDIVCWNSMMAGLS 467

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                 EA   F+ M   G+ PS  S+  V    + L        V+  + + G  Y+ND
Sbjct: 468 LNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREG--YMND 525

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
            FV S+ I MY++ G  D AR +FD  L +NT  WN MI GY QN    EA+ L+  ++ 
Sbjct: 526 AFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIG 585

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
             E   D +TF++ L+A S    +D G ++
Sbjct: 586 SGEKP-DGITFVAVLTACSHSGLVDTGIKI 614



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 223/514 (43%), Gaps = 88/514 (17%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L S   +D F+++  I  YA+    D +R++FD   +R+   WN ++G Y + +   +A 
Sbjct: 32  LRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKASELEDAH 91

Query: 315 ELFVQVLELDEIVFDDVTFLSALS---AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            LF ++ E + + ++  T +SAL+   A   L +++ G++ H   IK  +   + V NA+
Sbjct: 92  VLFAEMPERNIVSWN--TLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNAL 149

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +                    E + VS+  M+     +   +E   L   M +    +DS
Sbjct: 150 LGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDS 209

Query: 412 VTVTALLSAAS-------------NLRNQDV-GKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           V+++++L   S             ++ + DV G+Q H   ++HG   +  + + L+DMYA
Sbjct: 210 VSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYA 269

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K+G + +A  IF   +  +    +WN MIAGY Q     +A    ++M  H   P+ +T 
Sbjct: 270 KNGNMDSAEMIFV--NMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITY 327

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC   G+IE G+Q+                                   F  +  
Sbjct: 328 VNMLVACIKSGDIEAGRQM-----------------------------------FDGMSS 352

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +  ++ T++ GY Q+   + A+ LFR M+   + PD  T   +LS+ +   L++ G Q+
Sbjct: 353 PSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQV 412

Query: 637 FDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEI--WGSLLGS 692
             + Q   K    T+ Y    +  M  + GKV  A      + E    L+I  W S++  
Sbjct: 413 HAVSQ---KAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE----LDIVCWNSMMAG 465

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
             L+   + A    KK+ E     S   Y  +LS
Sbjct: 466 LSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 499


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/585 (33%), Positives = 316/585 (54%), Gaps = 57/585 (9%)

Query: 266 ASSAIFMYAELGCF---DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           ++S +F  + L  F   D+AR +FD   + N   WNT+I  Y  ++ P ++  +F+ +L+
Sbjct: 59  SASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLD 118

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
             E + +  TF   + A S+L+   +G  +H   IK    + + +LN+++          
Sbjct: 119 KCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLS 178

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      +DVVSWN+MISAF Q    ++ L L  +M+++  M +SVT+  +LSA +
Sbjct: 179 MAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACA 238

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK----------- 470
              + + G+   +Y+ R GI  +  + + ++DMY K G +  A+++F++           
Sbjct: 239 KKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTI 298

Query: 471 -----NDSGDRDQ-------------ATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTP 511
                   GD D              A WN +I+ Y QNG  +EA   F ++ L     P
Sbjct: 299 MLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKP 358

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + VT+ S L AC  +G I+LG  +H +  R  +  N  + +SL+DMY+K G +  A  VF
Sbjct: 359 DEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVF 418

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             + E++   ++ MI G G HG  + A+ LF  M+   ++P+++TF  VL ACS+AGLVD
Sbjct: 419 YSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVD 478

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           EG   F  M+  Y + P  +HY C+ D+LGR G + EA E + E+    +   +WG+LLG
Sbjct: 479 EGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSA-SVWGALLG 537

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C LH + EL E+ + +LL+++ RN   G  VLLSNIYA+ G WE V ++RK MR+  L+
Sbjct: 538 ACSLHMNVELGELASDQLLKLEPRNH--GAIVLLSNIYAKTGRWEKVSELRKLMRDTELK 595

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCS I+  G V+ F   D  HP S  IY  LE +A ++++ G
Sbjct: 596 KEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVG 640



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 157/601 (26%), Positives = 259/601 (43%), Gaps = 124/601 (20%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNP---SRFVYNSLLNMYSTCLSSLDA 161
           N+   S +  C+ ++ L   K VH   +R   F +P   S+    S L+ +ST       
Sbjct: 25  NHQILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFST------- 74

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML-RM 220
                    +DY++      +FD + + N+  WNT++  Y  +    ++   F  +L + 
Sbjct: 75  ---------LDYAR-----NLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKC 120

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
              P+  +F  V  A S L   +    V+G+ +KL   +  DL++ +S +  Y   G   
Sbjct: 121 EDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLS--FGMDLYILNSLVRFYGACGDLS 178

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A ++F     ++   WN+MI  + Q N P +A+ELF++ +E + ++ + VT +  LSA 
Sbjct: 179 MAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLK-MERENVMPNSVTMVGVLSAC 237

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVS-- 378
           ++  +L+ G+ + +YI +  + + + + NA++                    ERDV S  
Sbjct: 238 AKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWT 297

Query: 379 -----------------------------WNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                        WN +ISA+ QNG   E L +  E+Q      
Sbjct: 298 IMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAK 357

Query: 410 -DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D VT+ + LSA + L   D+G   H Y+ R GI     + S L+DMYAK G ++ A ++
Sbjct: 358 PDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEV 417

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F   +  +RD   W+AMIAG   +G  + A   F +M E  V PN VT  +VL AC+  G
Sbjct: 418 FYSVE--ERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAG 475

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            ++ G+              VF               +    V+  +PE     Y  M+ 
Sbjct: 476 LVDEGR--------------VF--------------FHEMEPVYGVVPEMKH--YACMVD 505

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
             G+ G  E A+ L   M      P A  + A+L ACS    V+ G    D   Q  K++
Sbjct: 506 ILGRAGFLEEAMELINEM---STTPSASVWGALLGACSLHMNVELGELASD---QLLKLE 559

Query: 648 P 648
           P
Sbjct: 560 P 560



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 139/562 (24%), Positives = 243/562 (43%), Gaps = 119/562 (21%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN----YTYSSV 113
           AR LFD I +P    WNT+I  +  ++ P+++ +++  +        C++    +T+  V
Sbjct: 78  ARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDL-----LDKCEDLPNKFTFPFV 132

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           +KA +E +  R+G AVH   I+       ++ NSL+  Y  C     AE           
Sbjct: 133 IKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE----------- 181

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  ++F  +  ++VV+WN+++S + +     +A+  F  M R  + P++++ V V 
Sbjct: 182 -------RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVL 234

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +   D +    V   + + G +   DL + ++ + MY + G  D A+K+FD   ER+
Sbjct: 235 SACAKKLDLEFGRWVCSYIERKGIKV--DLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292

Query: 294 T-------------------------------EVWNTMIGGYVQNNHPVEAIELFVQVLE 322
                                             WN +I  Y QN  P EA+ +F + L+
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNE-LQ 351

Query: 323 LDEIVF-DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
           L +I   D+VT +S LSA +QL  +DLG  +H YI +  + L   ++++++         
Sbjct: 352 LSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSL 411

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      ERDV  W+ MI+    +G     + L +EMQ+     +SVT T +L A 
Sbjct: 412 EKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCAC 471

Query: 422 SNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S           HA L+  G + F  ME          G++   +               
Sbjct: 472 S-----------HAGLVDEGRVFFHEMEPVY-------GVVPEMKH-------------- 499

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           +  M+    + G LEEA     +M   + TP+     ++L AC+   N+ELG +L    +
Sbjct: 500 YACMVDILGRAGFLEEAMELINEM---STTPSASVWGALLGACSLHMNVELG-ELASDQL 555

Query: 541 RYLLDQNVFVGTSLIDMYSKSG 562
             L  +N      L ++Y+K+G
Sbjct: 556 LKLEPRNHGAIVLLSNIYAKTG 577



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 194/422 (45%), Gaps = 34/422 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +A +LF  I+    V WN++I  F   N P +A+ L+ +M++ +     ++ T   
Sbjct: 175 GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMP--NSVTMVG 232

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA+  +L  G+ V  +  R        + N++L+MY+ C S  DA+ +  +  E D
Sbjct: 233 VLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292

Query: 173 ----------YSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMML 218
                     Y+K   YD    VF+ M  + + AWN ++S Y +  +  EA+  F  + L
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
               +P  ++ V+   A + LG       ++  + + G   V +  + SS + MYA+ G 
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREG--IVLNCHLISSLVDMYAKCGS 410

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A ++F +  ER+  VW+ MI G   +     AI+LF ++ E  ++  + VTF + L 
Sbjct: 411 LEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEA-KVKPNSVTFTNVLC 469

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
           A S    +D G+     +   +  +P          ++  +  M+    + G  +E + L
Sbjct: 470 ACSHAGLVDEGRVFFHEMEPVYGVVP----------EMKHYACMVDILGRAGFLEEAMEL 519

Query: 399 VYEMQKQGFMIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           + EM        S +V  ALL A S   N ++G+     LL+      G    L ++YAK
Sbjct: 520 INEMSTT----PSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAK 575

Query: 458 SG 459
           +G
Sbjct: 576 TG 577



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 177/380 (46%), Gaps = 36/380 (9%)

Query: 431 KQTHAYLLRHGIHFEGME-SYLIDMYAKSGL--IKTARQIFEKNDSGDRDQATWNAMIAG 487
           K+ HA +LR G+ F+    S L    A S    +  AR +F++      +  TWN +I  
Sbjct: 42  KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ--IPQPNLYTWNTLIRA 99

Query: 488 YTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           Y  +    ++FV F  +L+     PN  T   V+ A + +    +G  +HG +I+     
Sbjct: 100 YASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGM 159

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           ++++  SL+  Y   G ++ A  +F  I  K+ V++ +MI  + Q    E AL LF  M+
Sbjct: 160 DLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKME 219

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
              + P+++T V VLSAC+    ++ G  +   ++++  I+        + DM  + G V
Sbjct: 220 RENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERK-GIKVDLTLCNAMLDMYTKCGSV 278

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP-----GY 721
            +A +   E+ E  +V   W     +  L G++++ +  A +L+     N+MP      +
Sbjct: 279 DDAQKLFDEMPER-DVFS-W-----TIMLDGYAKMGDYDAARLV----FNAMPVKEIAAW 327

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRK--EV-------GCSW---IDVGGYVNRFA 769
           +VL+S  Y + G  +    +  E++   + K  EV        C+    ID+GG+++ + 
Sbjct: 328 NVLIS-AYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYI 386

Query: 770 SKDQEHPQSHKIYEMLERLA 789
            ++      H I  +++  A
Sbjct: 387 KREGIVLNCHLISSLVDMYA 406


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 184/536 (34%), Positives = 296/536 (55%), Gaps = 64/536 (11%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D  + S  +FMY   G     R+IFD        +WN ++ GY +  +  E++ LF ++ 
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNT 381
           EL                   ++ ++  ++L                + + +RDV+SWN+
Sbjct: 195 ELG------------------IRRVESARKL---------------FDELGDRDVISWNS 221

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MIS +V NGL ++GL L  +M   G   D  T+ ++    +N                  
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNC----------------- 264

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                    L+DMY+KSG + +A Q+FE    G+R   +W +MIAGY + GL + +   F
Sbjct: 265 ---------LLDMYSKSGNLNSAIQVFET--MGERSVVSWTSMIAGYAREGLSDMSVRLF 313

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M + ++ PN +T+A +LPAC  +  +E G+++HG  +R     +  V  +L+DMY K 
Sbjct: 314 HEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC 373

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +  A  +F  IPEK+ V++T MI GYG HG    A++ F  M+  GIEPD ++F+++L
Sbjct: 374 GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 433

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
            ACS++GL+DEG   F++M+    I+P +EHY C+ D+L R G + +AY+F+K +  E +
Sbjct: 434 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPD 493

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              IWG+LL  CR++   +LAE VA+ + E++  N+  GY+VLL+NIYAE   WE V K+
Sbjct: 494 A-TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT--GYYVLLANIYAEAEKWEEVKKL 550

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           R+ +  RGLRK  GCSWI++ G V+ F + D  HP ++KI  +L++    M+  G+
Sbjct: 551 RERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 606



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 124/534 (23%), Positives = 217/534 (40%), Gaps = 99/534 (18%)

Query: 14  PPTATPPPPQLPQIHSLSPP------IPKLKTPTIRSRLSKICQE-GRPHLARQLFDSIT 66
           P     PP Q+ + +SL+ P       P  KTP + S L   C   G   L  +  D   
Sbjct: 9   PNLWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLPSETIDC-- 66

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
                 +N  I  F        A+ L +Q    SP    +  TY SVL+ CA+ ++++ G
Sbjct: 67  --KITDYNIEICRFCELGNLRRAMELINQ----SPKPDLELRTYCSVLQLCADLKSIQDG 120

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           + +H             + + L+ MY TC    +                    ++FD +
Sbjct: 121 RRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGR------------------RIFDKV 162

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR--------------PSTISFVNV 232
               V  WN +++ Y K   + E++  F+ M  +GIR                 IS+ ++
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 233 FPALSSLG------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
                S G      D     ++ G+   L +    +L + +  + MY++ G  + A ++F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +   ER+   W +MI GY +      ++ LF + +E +++  + +T    L A + L  L
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE-MEKEDLFPNSITMACILPACASLAAL 341

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
           + GQ++H +I++N  +L   V NA++                    E+D+VSW  MI+ +
Sbjct: 342 ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGY 401

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
             +G   E +    EM+  G   D V+  ++L A S           H+ LL  G  F  
Sbjct: 402 GMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS-----------HSGLLDEGWGFFN 450

Query: 447 M-----------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           M           E Y  ++D+ A++G +  A + F K    + D   W A++ G
Sbjct: 451 MMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK-FIKMMPIEPDATIWGALLCG 503



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 32/262 (12%)

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV--VTIASVLPACNPMGNIELGKQLHGF 538
           +N  I  + + G L  A     +++  +  P++   T  SVL  C  + +I+ G+++H  
Sbjct: 71  YNIEICRFCELGNLRRAM----ELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSI 126

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
                ++ +  +G+ L+ MY   G +     +F K+  +    +  ++ GY + G    +
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186

Query: 599 LSLFRSMKGCGI--------------EPDAITFVAVLSACSYAGLVDEGLQIFDLM---- 640
           LSLF+ M+  GI              + D I++ +++S     GL ++GL +F+ M    
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246

Query: 641 -QQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
              +     S E     C+ DM  + G +  A +  + +GE   V   W S++     + 
Sbjct: 247 INTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV--SWTSMIAG---YA 301

Query: 698 HSELAEVVAKKLLEMDTRNSMP 719
              L+++  +   EM+  +  P
Sbjct: 302 REGLSDMSVRLFHEMEKEDLFP 323


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 218/710 (30%), Positives = 358/710 (50%), Gaps = 81/710 (11%)

Query: 110 YSSVLKACAET---RNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           Y+++L + A       +R+  AVHC  ++ F   P  F+ N LL  Y+       A  V 
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 166 LKYVEVD-YSKYDLVC------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            +  + + +++  L+             ++F +M  R+ V++N +++ +  T     +V+
Sbjct: 72  DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131

Query: 213 QFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
            +R +LR   +RP+ I+   +    S+L D      V+  +++LG  +    FV S  + 
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLG--FGAYAFVGSPLVD 189

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MYA++G    AR++F     +   ++NT+I G ++     +A  LF              
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLF-------------- 235

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
                              QL                  +++RD ++W TM++   QNGL
Sbjct: 236 -------------------QL------------------MVDRDSITWTTMVTGLTQNGL 258

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGME 448
             E L +   M+ +G  ID  T  ++L+A   L   + GKQ HAY+ R       F G  
Sbjct: 259 QLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG-- 316

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L+DMY+K   I+ A  +F +     R+  +W AMI GY QN   EEA  AF +M    
Sbjct: 317 SALVDMYSKCRSIRLAEAVFRRMTC--RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG 374

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           + P+  T+ SV+ +C  + ++E G Q H  ++   L + + V  +L+ +Y K G I  A 
Sbjct: 375 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAH 434

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F ++   + V++T ++ GY Q G ++  + LF  M   G++PD +TF+ VLSACS AG
Sbjct: 435 RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAG 494

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV++G   FD MQ+++ I P  +HY C+ D+  R G+  EA EF+K++    +    W +
Sbjct: 495 LVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFG-WAT 553

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL SCRL G+ E+ +  A+ LLE D +N  P  +VLL +++A +G W  V  +R+ MR+R
Sbjct: 554 LLSSCRLRGNMEIGKWAAENLLETDPQN--PASYVLLCSMHAAKGQWTEVAHLRRGMRDR 611

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
            ++KE GCSWI     V+ F++ DQ HP S +IYE LE L  +M   G K
Sbjct: 612 QVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 209/507 (41%), Gaps = 71/507 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF S+     V +N +I GF     P  ++ LY  + +          T S+++   + 
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPT-RITLSAMIMVASA 158

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD-- 177
             +  +G +VHC  +R       FV + L++MY+      DA  V  +        Y+  
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 178 ----LVCK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               L CK       +F  M  R+ + W T+V+   +    +EA+  FR M   G+    
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F ++  A  +L   +    ++  + +  + Y +++FV S+ + MY++      A  +F
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITR--TWYEDNVFVGSALVDMYSKCRSIRLAEAVF 336

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                RN   W  MI GY QN    EA+  F + +++D I  DD T  S +S+ + L  L
Sbjct: 337 RRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQMDGIKPDDFTLGSVISSCANLASL 395

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G Q H   + + +   + V NA++                      D VSW  +++ +
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q G   E + L  +M   G   D VT   +LSA S                R G+  +G
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS----------------RAGLVEKG 499

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            + Y   M    G++                   +  MI  Y+++G  +EA    +QM  
Sbjct: 500 CD-YFDSMQKDHGIVPIDDH--------------YTCMIDLYSRSGRFKEAEEFIKQMPH 544

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGK 533
              +P+    A++L +C   GN+E+GK
Sbjct: 545 ---SPDAFGWATLLSSCRLRGNMEIGK 568



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 36/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LF  +    ++ W T++ G   N L  EA+ ++ +M+        D YT+ S+L AC
Sbjct: 231 AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG--VGIDQYTFGSILTAC 288

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H +  R +   + FV ++L++MYS C S   AE               
Sbjct: 289 GALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE--------------- 333

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  RN+++W  ++  Y +     EAVR F  M   GI+P   +  +V  + +
Sbjct: 334 ---AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     + L   L S  +  + V+++ + +Y + G  + A ++FD     +   W
Sbjct: 391 NLASLEEGAQFHCL--ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E I+LF ++L  + +  D VTF+  LSA S+   ++ G      + 
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLA-NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQ 507

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+   +P+             +  MI  + ++G   E    + +M       D+     L
Sbjct: 508 KDHGIVPID----------DHYTCMIDLYSRSGRFKEAEEFIKQMPHSP---DAFGWATL 554

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LS+     N ++GK     LL            L  M+A  G
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA  +F  +T    + W  +I+G+  N    EA+  +S+M+        D++T  SV+ +
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG--IKPDDFTLGSVISS 388

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRF--VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           CA   +L  G   HC  +   S   R+  V N+L+ +Y  C S  DA             
Sbjct: 389 CANLASLEEGAQFHC--LALVSGLMRYITVSNALVTLYGKCGSIEDAH------------ 434

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 ++FD M   + V+W  +V+ Y +  +  E +  F  ML  G++P  ++F+ V  
Sbjct: 435 ------RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           A S  G           LV+ G +Y + +
Sbjct: 489 ACSRAG-----------LVEKGCDYFDSM 506


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 223/755 (29%), Positives = 385/755 (50%), Gaps = 50/755 (6%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T  + S L+  C+ GR   AR++FD +     V W  +I          +A+ ++++M +
Sbjct: 85  TFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQ 144

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                + + +T +SVLKAC+   + +    VH   ++       +V +SL+  Y++C   
Sbjct: 145 EG--IAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGEL 202

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
             AE V L   E                  R+ V+WN +++ Y +   Y   +     ++
Sbjct: 203 DAAETVLLGLPE------------------RSDVSWNALLNGYARHGDYRRVMIIIEKLV 244

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
             G   S  +   V      LG  K    V+  ++K G E   D  + S  + MY+    
Sbjct: 245 ASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLE--TDNVLNSCLVEMYSRCLS 302

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A ++F    E +    + MI  + +++   EA++LFV++  +  +  +   F+    
Sbjct: 303 AEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMG-VKPNHYIFVGIAG 361

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVS 378
             S+  + +L + +HAYI+K+  A+   V +A++                    E D  S
Sbjct: 362 VASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFS 421

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WNT++SAF      ++GL +  +M  +GF  +  T  ++L   ++L N   G Q HA +L
Sbjct: 422 WNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACIL 481

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G+  +  +   L+DMYA+SG   +A  +FE+    +RD  +W  +++GY +    E+ 
Sbjct: 482 KSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK--ERDAFSWTVIMSGYAKTEEAEKV 539

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              FR ML  N+ P+  T+A  L  C+ M ++  G QLH ++I+   + +V  G +L+DM
Sbjct: 540 VEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSVVSG-ALVDM 598

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y K G I  A  +F +   ++ V + T+I GY QHG   +AL  F+ M   G  PD ITF
Sbjct: 599 YVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITF 658

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V VLSACS+AGL++EG + F  +   Y I P+ EHY C+ D+L + G++VEA   + ++ 
Sbjct: 659 VGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMP 718

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
              +   IW ++LG+CR+H + E+AE  A++L E++  ++     +LLSNIYA+ G W +
Sbjct: 719 LAPDS-SIWRTILGACRIHRNIEIAERAAERLFELEPHDASSS--ILLSNIYADLGRWSD 775

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           V +VR  + + G++KE GCSWI++ G ++ F S+D
Sbjct: 776 VTRVRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/630 (24%), Positives = 274/630 (43%), Gaps = 54/630 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +++ L+ CA  R LR G+ +H   +R   +P  F+ +SLLNMY  C   +DA        
Sbjct: 53  HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDAR------- 105

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VFD M  R++VAW  ++S +       +A+  F  M + GI P+  + 
Sbjct: 106 -----------RVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTL 154

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A S     K    V+G +VKL    ++D +V SS +  Y   G  D A  +    
Sbjct: 155 ASVLKACSGGSHSKFTHQVHGQVVKLNG--LDDPYVGSSLVEAYTSCGELDAAETVLLGL 212

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WN ++ GY ++      + + ++ L          T  + L    +L     G
Sbjct: 213 PERSDVSWNALLNGYARHG-DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYG 271

Query: 350 QQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQN 389
           Q +HA +IK  +    ++ + ++E                     DVV  + MIS F ++
Sbjct: 272 QSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRH 331

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGME 448
            +  E L L  +M   G   +      +   AS   + ++ +  HAY+++ G    +G+ 
Sbjct: 332 DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG 391

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
             +++MY K G ++ A   F+     + D  +WN +++ +      E+    F+QM    
Sbjct: 392 DAILNMYVKVGAVQDATVTFDLIH--EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEG 449

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            + N  T  SVL  C  + N+  G Q+H   ++  L  +  V   L+DMY++SG    A 
Sbjct: 450 FSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSAC 509

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF ++ E+++ ++T ++ GY +   +E+ +  FRSM    I P   T    LS CS   
Sbjct: 510 LVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMA 569

Query: 629 LVDEGLQIFDLMQQEYKIQP---STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            +  GLQ+       + I+    S+     + DM  + G + +A     E      V   
Sbjct: 570 SLGSGLQL-----HSWAIKSGWNSSVVSGALVDMYVKCGNIADAEMLFHESETRDQV--A 622

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           W +++     HGH   A    K++++   R
Sbjct: 623 WNTIICGYSQHGHGYKALDAFKQMVDEGKR 652


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/631 (32%), Positives = 338/631 (53%), Gaps = 29/631 (4%)

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           R+ + +A +  VS   K  R  EA+     M+  G R  +  F  +    + L   +   
Sbjct: 57  RKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGR 116

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            V+  ++K G +   + ++ ++ + MYA+ G    AR++FD   +RN   W  MI  +V 
Sbjct: 117 EVHAAILKSGIQ--PNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL--- 363
            N  +EA + + + ++L     D VTF+S L+A +  + L +GQ++H  I K  + L   
Sbjct: 175 GNQNLEAYKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPR 233

Query: 364 -----------------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                              ++ + + E++VV+W  +I+ + Q G  D  L L+ +MQ+  
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              + +T T++L   +     + GK+ H Y+++ G   E  + + LI MY K G +K AR
Sbjct: 294 VAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEAR 353

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F   D   RD  TW AM+ GY Q G  +EA   FR+M +  + P+ +T  S L +C+ 
Sbjct: 354 KLF--GDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSS 411

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
              ++ GK +H   +      +V++ ++L+ MY+K G ++ A  VF ++ E+N V +T M
Sbjct: 412 PAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAM 471

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I G  QHG    AL  F  MK  GI+PD +TF +VLSAC++ GLV+EG + F  M  +Y 
Sbjct: 472 ITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYG 531

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I+P  EHY C  D+LGR G + EA   +  +  +     +WG+LL +CR+H   E  E  
Sbjct: 532 IKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGP-SVWGALLSACRIHSDVERGERA 590

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ +L++D  +   G +V LSNIYA  G +E+ +KVR+ M +R + KE G SWI+V G V
Sbjct: 591 AENVLKLDPDDD--GAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKV 648

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + F  +D+ HP++ +IY  L +L  +++  G
Sbjct: 649 HVFHVEDKSHPEAKEIYAELGKLTEQIKEQG 679



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 238/488 (48%), Gaps = 45/488 (9%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +L+ CA  R+L  G+ VH   ++    P+R++ N+LL+MY+ C S  DA        
Sbjct: 99  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDAR------- 151

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VFD +R RN+V+W  ++  +V   + +EA + +  M   G +P  ++F
Sbjct: 152 -----------RVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTF 200

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++  A ++    +    V+  + K G E   +  V +S + MYA+ G    A+ IFD  
Sbjct: 201 VSLLNAFTNPELLQVGQKVHMEIAKAGLEL--EPRVGTSLVGMYAKCGDISKAQVIFDKL 258

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   W  +I GY Q      A+EL ++ ++  E+  + +T+ S L   +    L+ G
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALEL-LEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +++H YII++     + V+NA+I                     RDVV+W  M++ + Q 
Sbjct: 318 KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           G  DE + L   MQ+QG   D +T T+ L++ S+      GK  H  L+  G   +  ++
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L+ MYAK G +  AR +F  N   +R+   W AMI G  Q+G   EA   F QM +  
Sbjct: 438 SALVSMYAKCGSMDDARLVF--NQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495

Query: 509 VTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           + P+ VT  SVL AC  +G +E G K      + Y +   V   +  +D+  ++G +  A
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555

Query: 568 ANVFAKIP 575
            NV   +P
Sbjct: 556 ENVILTMP 563



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 197/437 (45%), Gaps = 53/437 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     V W  +I  FV  N   EA   Y  MK +      D  T+ S+L A 
Sbjct: 150 ARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG--CKPDKVTFVSLLNAF 207

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L++G+ VH    +        V  SL+ MY+ C                D SK  
Sbjct: 208 TNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKC---------------GDISKAQ 252

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   +FD +  +NVV W  +++ Y +  +   A+     M +  + P+ I++ ++    +
Sbjct: 253 V---IFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +    +    V+  +++ G  Y  +++V ++ I MY + G    ARK+F +   R+   W
Sbjct: 310 TPLALEHGKKVHRYIIQSG--YGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTW 367

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             M+ GY Q     EAI+LF + ++   I  D +TF SAL++ S    L  G+ +H  ++
Sbjct: 368 TAMVTGYAQLGFHDEAIDLF-RRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLV 426

Query: 358 KNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
               +L V                    +V N + ER+VV+W  MI+   Q+G   E L 
Sbjct: 427 HAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALE 486

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGI-----HFEGMESYL 451
              +M+KQG   D VT T++LSA +++   + G K   +  L +GI     H+    S  
Sbjct: 487 YFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY----SCF 542

Query: 452 IDMYAKSGLIKTARQIF 468
           +D+  ++G ++ A  + 
Sbjct: 543 VDLLGRAGHLEEAENVI 559



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 193/427 (45%), Gaps = 39/427 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +FD +     V W  +I G+        A+ L  +M+++    + +  TY+S+L+ C
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE--VAPNKITYTSILQGC 308

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK VH + I+       +V N+L+ MY  C         GLK          
Sbjct: 309 TTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC--------GGLKEAR------- 353

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  +  R+VV W  +V+ Y +   + EA+  FR M + GI+P  ++F +   + S
Sbjct: 354 ---KLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCS 410

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S    +    ++  LV  G  Y  D+++ S+ + MYA+ G  D AR +F+   ERN   W
Sbjct: 411 SPAFLQEGKSIHQQLVHAG--YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAW 468

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MI G  Q+    EA+E F Q ++   I  D VTF S LSA + +  ++ G+       
Sbjct: 469 TAMITGCAQHGRCREALEYFEQ-MKKQGIKPDKVTFTSVLSACTHVGLVEEGR------- 520

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+F ++    L+  I+  V  ++  +    + G  +E   ++  M    F        AL
Sbjct: 521 KHFRSM---YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMP---FQPGPSVWGAL 574

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA---RQIFEKNDSG 474
           LSA     + + G++    +L+     +G    L ++YA +G  + A   RQ+ EK D  
Sbjct: 575 LSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634

Query: 475 DRDQATW 481
                +W
Sbjct: 635 KEPGQSW 641



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 31/238 (13%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + + ++  C+ G    AR+LF  +     V W  ++ G+       EAI L+ +M++   
Sbjct: 336 VNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQG- 394

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D  T++S L +C+    L+ GK++H   +    +   ++ ++L++MY+ C S  DA
Sbjct: 395 -IKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDA 453

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
            +V                  F+ M  RNVVAW  +++   +  R  EA+  F  M + G
Sbjct: 454 RLV------------------FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           I+P  ++F +V  A + +G           LV+ G ++   +++      M     CF
Sbjct: 496 IKPDKVTFTSVLSACTHVG-----------LVEEGRKHFRSMYLDYGIKPMVEHYSCF 542


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 232/767 (30%), Positives = 392/767 (51%), Gaps = 56/767 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     + WN +I G   N+     + L+  M ++      +  T +SV  A 
Sbjct: 251 ARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENE--VQPNLMTITSVTVAS 308

Query: 118 AETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                +   K +H   + R F+    F  NSL+ MY++     DA               
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFC-NSLIQMYTSLGRMGDAG-------------- 353

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+F  M  ++ ++W  ++S Y K     +A+  + +M    + P  ++  +   A 
Sbjct: 354 ----KIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAAC 409

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LG       ++ L    G  ++  + VA++ + MYA+    D A ++F    E++   
Sbjct: 410 ACLGRLDVGIKLHELAQNKG--FIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVS 467

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W++MI G+  N+   +A+  F  +L    +  + VTF++ALSA +    L  G+++HAY+
Sbjct: 468 WSSMIAGFCFNHRSFDALYYFRYML--GHVKPNSVTFIAALSACAATGALRSGKEIHAYV 525

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           ++  +     V NA++                    E+DVVSWN M+S FV +GL D  L
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIAL 585

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMY 455
            L  +M      +  +   + L+A + L   DVG + H      G I +  + + L++MY
Sbjct: 586 SLFNQMMYTS--LGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMY 643

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AKS  I  A ++F+     ++D  +W++MIAG+  N    +A   FR ML H V PN VT
Sbjct: 644 AKSKHIDKAIEVFKF--MAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVT 700

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             + L AC   G +  GK++H + +R  +    +V  +L+D+Y K G  +YA   F+   
Sbjct: 701 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHS 760

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           EK+ V++  M+ G+  HG+ + ALSLF  M   G  PD +TFV ++ ACS AG+V +G +
Sbjct: 761 EKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWE 819

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           +F    +++ I P+ +HY C+ D+L RVGK+ EAY  +  +  + +   +WG+LL  CR+
Sbjct: 820 LFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA-AVWGALLNGCRI 878

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H H EL E+ AK +LE++  +    YHVLL ++Y + G W  V +VRK MRE+GL ++ G
Sbjct: 879 HRHVELGELAAKVILELEPNDV--AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNG 936

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
           CSW++V G  + F + D+ HPQ  +I  +L  +   M+  G   +++
Sbjct: 937 CSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVES 983



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 197/691 (28%), Positives = 330/691 (47%), Gaps = 59/691 (8%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS + + G    A ++F  +       WN ++ G+       EA+ LY +M  +      
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG--MRP 195

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D YT+  VL+ C    + R+G+ VH H +R        V N+L+ MY+ C   + A    
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR--- 252

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          KVFD M   + ++WN +++ + +       +  F  ML   ++P+
Sbjct: 253 ---------------KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPN 297

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            ++  +V  A   L +   A  ++G  VK G  +  D+   +S I MY  LG    A KI
Sbjct: 298 LMTITSVTVASGMLSEVGFAKEMHGFAVKRG--FAIDVAFCNSLIQMYTSLGRMGDAGKI 355

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     ++   W  MI GY +N  P +A+E++  ++EL  +  DDVT  SAL+A + L  
Sbjct: 356 FSRMETKDAMSWTAMISGYEKNGFPDKALEVYA-LMELHNVNPDDVTIASALAACACLGR 414

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           LD+G +LH           V+V NA++                    E+DVVSW++MI+ 
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  N    + L     M       +SVT  A LSA +       GK+ HAY+LR GI  E
Sbjct: 475 FCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSE 533

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           G + + L+D+Y K G    A   F  +   ++D  +WN M++G+  +GL + A   F QM
Sbjct: 534 GYVPNALLDLYVKCGQTSYAWAQFSVHS--EKDVVSWNIMLSGFVAHGLGDIALSLFNQM 591

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           +  ++    +   S L AC  +G +++G +LH  +      + V V  +L++MY+KS  I
Sbjct: 592 MYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHI 649

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + A  VF  + EK+ V++++MI G+  +  S  AL  FR M G  ++P+++TF+A LSAC
Sbjct: 650 DKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLG-HVKPNSVTFIAALSAC 708

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKVVEAY-EFVKELGEEGN 681
           +  G +  G +I   +    +    +E Y    + D+  + G+   A+ +F   +  E +
Sbjct: 709 AATGALRSGKEIHAYV---LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF--SVHSEKD 763

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           V+  W  +L     HG  ++A  +  +++EM
Sbjct: 764 VVS-WNIMLSGFVAHGLGDIALSLFNQMVEM 793



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 203/395 (51%), Gaps = 25/395 (6%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           L + ++ + M    G    A ++F    ER+   WN M+GGY +     EA++L+ ++L 
Sbjct: 131 LRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRML- 189

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
              +  D  TF   L     + +  +G+++HA++++      V VLNA++          
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIV 249

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                       D +SWN MI+   +N   + GL L   M +     + +T+T++  A+ 
Sbjct: 250 AARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASG 309

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            L      K+ H + ++ G   +    + LI MY   G +  A +IF + ++  +D  +W
Sbjct: 310 MLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMET--KDAMSW 367

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            AMI+GY +NG  ++A   +  M  HNV P+ VTIAS L AC  +G +++G +LH  +  
Sbjct: 368 TAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQN 427

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
               + V V  +L++MY+KS  I+ A  VF  + EK+ V++++MI G+  +  S  AL  
Sbjct: 428 KGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYY 487

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           FR M G  ++P+++TF+A LSAC+  G +  G +I
Sbjct: 488 FRYMLG-HVKPNSVTFIAALSACAATGALRSGKEI 521


>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
 gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 202/609 (33%), Positives = 333/609 (54%), Gaps = 33/609 (5%)

Query: 212 RQFRMMLRMG----IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           RQ+R  + +G    +R    +F  +  A ++L        V+ + ++       D FVA+
Sbjct: 79  RQWRAAILLGPRLRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIR-SCTASEDAFVAT 137

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + + MYA  G    A   +    + +  +  +++ GY QN    EA+E F + +    ++
Sbjct: 138 AIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVM 197

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------- 372
              VT +SA+SA +QL  +  GQ  HAY+++N +   + ++N V+               
Sbjct: 198 LTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRL 257

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
                +RDV++W+ MI  +VQ+G   EGL +  EM K     +SVT+ ++L A + + + 
Sbjct: 258 FEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDA 317

Query: 428 DVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           + GK+ H   +  G   E G+ + L+DMY K    + A  +F +     +D   W A+I 
Sbjct: 318 EEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPK--KDVVAWAAVIG 375

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           G TQN L  E+   F+ ML  +  P+ +T+  VL AC+  G   L   LHG+ +R   + 
Sbjct: 376 GLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNN 435

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           N FV  +L+D+YSK G I+ A  VF    EK+ V + +MI GYG HG+ + A++L++ M 
Sbjct: 436 NAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMI 495

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
              I+P+++TFV+VLSACS++GLV EG+QIFD M Q + + P+ EH   + D+LGR G++
Sbjct: 496 ASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGEL 555

Query: 667 VEAYEFVKELGEEGN-VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
            EA  F++  G +G  V   W +LL +CR H ++++++V AK LL++D  +   GY+ LL
Sbjct: 556 QEAIRFIR--GMDGRAVAHTWCALLAACREHNNTKMSKVAAKSLLKLDPDHV--GYYNLL 611

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           +NIYA +  WE+V   R  +R R LRK  G S ++VG  V+ F + ++ H     I  +L
Sbjct: 612 TNIYAYDEKWESVKDTRDMVRGRDLRKVPGYSSVEVGNLVHTFIAGERTHQDWDNICTLL 671

Query: 786 ERLAMEMRN 794
             L+ ++R 
Sbjct: 672 CDLSRKLRG 680



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 275/593 (46%), Gaps = 84/593 (14%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P LAR LFD    PT  + N ++   +       AILL  +++        D +T+S +L
Sbjct: 50  PGLARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLR-----VRLDGFTFSLLL 104

Query: 115 KACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           +ACA   +L  G+AVH   IR C ++   FV  +++ MY+ C      +MVG        
Sbjct: 105 RACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARC-----GDMVG-------- 151

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNV 232
                    +  + + ++V   ++V+ Y +     EA+  F R ++  G+  + ++ V+ 
Sbjct: 152 -----AINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSA 206

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + LG  +     +  +V+    Y  DL + ++ +  Y ++G F  + ++F+   +R
Sbjct: 207 MSAAAQLGHVRKGQACHAYVVRNSLGY--DLALVNTVLSFYVKIGDFQASMRLFEGMTDR 264

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W+ MI GYVQ+    E + ++ ++++   +  + VT +S L A + + + + G+++
Sbjct: 265 DVITWSCMIKGYVQHGDAHEGLRMYREMVKA-RVQPNSVTLVSVLQACALVVDAEEGKRV 323

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H   +     L V V  A+++                    +DVV+W  +I    QN L 
Sbjct: 324 HRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELP 383

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            E L +   M     + D++T+  +L+A S      +    H YL+R+G +    + + L
Sbjct: 384 GESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAAL 443

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +D+Y+K G I +A ++FE   + ++D   W +MIAGY  +GL +EA   +++M+  ++ P
Sbjct: 444 LDLYSKCGDIDSAVRVFE--GTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQP 501

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N VT  SVL AC+  G ++ G Q                            + +    VF
Sbjct: 502 NSVTFVSVLSACSHSGLVQEGIQ----------------------------IFDSMTQVF 533

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             +P  N+   + M+   G+ G  + A+   R M G  +   A T+ A+L+AC
Sbjct: 534 GVVP--NAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAV---AHTWCALLAAC 581



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 219/478 (45%), Gaps = 67/478 (14%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           +  + +P  V+  +++ G+  N +  EA+  +++             T  S + A A+  
Sbjct: 156 YGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFAR-NVVGQGVMLTPVTLVSAMSAAAQLG 214

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           ++R G+A H + +R        + N++L+ Y                  V    +    +
Sbjct: 215 HVRKGQACHAYVVRNSLGYDLALVNTVLSFY------------------VKIGDFQASMR 256

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F+ M  R+V+ W+ ++  YV+     E +R +R M++  ++P++++ V+V  A + + D
Sbjct: 257 LFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVD 316

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    V+ + V +G E   ++ VA++ + MY +  C + A  +F    +++   W  +I
Sbjct: 317 AEEGKRVHRVAVSIGCEL--EVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVI 374

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-- 359
           GG  QN  P E++ +F + + LD+ V D +T +  L+A S+     L   LH Y+++N  
Sbjct: 375 GGLTQNELPGESLHVF-KCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGF 433

Query: 360 ----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
               FVA  ++              V     E+D+V W +MI+ +  +GL  E + L   
Sbjct: 434 NNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQR 493

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGM------------E 448
           M       +SVT  ++LSA S           H+ L++ GI  F+ M            +
Sbjct: 494 MIASSIQPNSVTFVSVLSACS-----------HSGLVQEGIQIFDSMTQVFGVVPNAEHQ 542

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           S ++D+  ++G ++ A +     D G     TW A++A   ++   + + VA + +L+
Sbjct: 543 SAMVDLLGRAGELQEAIRFIRGMD-GRAVAHTWCALLAACREHNNTKMSKVAAKSLLK 599



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 184/416 (44%), Gaps = 39/416 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF+ +T    + W+ +I G+V +   +E + +Y +M K+      ++ T  SVL+ACA 
Sbjct: 256 RLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKAR--VQPNSVTLVSVLQACAL 313

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
             +   GK VH   +         V  +L++MY  C                  S ++  
Sbjct: 314 VVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKC------------------SCHEEA 355

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +F  M +++VVAW  ++    + E   E++  F+ ML     P  I+ V V  A S  
Sbjct: 356 MCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEF 415

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G  + A  ++G LV+ G  + N+ FVA++ + +Y++ G  D A ++F+   E++  VW +
Sbjct: 416 GGTRLAICLHGYLVRNG--FNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGS 473

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI GY  +    EA+ L+ Q +    I  + VTF+S LSA S    +  G Q+   + + 
Sbjct: 474 MIAGYGAHGLGQEAVALY-QRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQV 532

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
           F  +P          +    + M+    + G   E +  +  M  +     + T  ALL+
Sbjct: 533 FGVVP----------NAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAV---AHTWCALLA 579

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA---KSGLIKTARQIFEKND 472
           A     N  + K     LL+      G  + L ++YA   K   +K  R +    D
Sbjct: 580 ACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRD 635


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/544 (36%), Positives = 317/544 (58%), Gaps = 39/544 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   ERN   W  MI  + Q     +AI+LF+  +EL   V D  T+ S LSA +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLD-MELSGYVPDRFTYSSVLSACT 67

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI-----------------------ERDVVS 378
           +L  L LG+QLH+ +I+  +AL V V  +++                       E +V+S
Sbjct: 68  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127

Query: 379 WNTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           W  +I+A+ Q+G  D E + L  +M       +  + +++L A  NL +   G+Q ++Y 
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNG 492
           ++ GI     + + LI MYA+SG ++ AR+    +FEKN        ++NA++ GY +N 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN------LVSYNAIVDGYAKNL 241

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEAF+ F ++ +  +  +  T AS+L     +G +  G+Q+HG  ++     N  +  
Sbjct: 242 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +LI MYS+ G I  A  VF ++ ++N +++T+MI G+ +HG + RAL +F  M   G +P
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 361

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           + IT+VAVLSACS+ G++ EG + F+ M +E+ I P  EHY C+ D+LGR G +VEA EF
Sbjct: 362 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 421

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  +    + L +W +LLG+CR+HG++EL    A+ +LE +  +  P  ++LLSN++A  
Sbjct: 422 INSMPLMADAL-VWRTLLGACRVHGNTELGRHAAEMILEQEPDD--PAAYILLSNLHASA 478

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W++V K+RK M+ER L KE GCSWI+V   V+RF   +  HPQ+ +IY+ L++LA ++
Sbjct: 479 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 538

Query: 793 RNAG 796
           +  G
Sbjct: 539 KEMG 542



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 218/474 (45%), Gaps = 46/474 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V W  +I  F       +AI L+  M+ S      D +TYSSVL AC
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--DRFTYSSVLSAC 66

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E   L +GK +H   IR        V  SL++MY+ C +             VD S+  
Sbjct: 67  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD----------GSVDDSR-- 114

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              KVF+ M   NV++W  I++ Y ++ E   EA+  F  M+   IRP+  SF +V  A 
Sbjct: 115 ---KVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 171

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +L D  + + VY   VKLG   VN   V +S I MYA  G  + ARK FD   E+N   
Sbjct: 172 GNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKAFDILFEKNLVS 229

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +N ++ GY +N    EA  LF ++ +   I     TF S LS  + +  +  G+Q+H  +
Sbjct: 230 YNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRL 288

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K        + NA+I                    +R+V+SW +MI+ F ++G     L
Sbjct: 289 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 348

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LID 453
            + ++M + G   + +T  A+LSA S++     G K  ++    HGI    ME Y  ++D
Sbjct: 349 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI-VPRMEHYACMVD 407

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +  +SGL+  A + F  +     D   W  ++     +G  E    A   +LE 
Sbjct: 408 LLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ 460



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 65/529 (12%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD M  RN+V W  +++ + +     +A+  F  M   G  P   ++ +V  A + LG
Sbjct: 11  KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL---GCFDFARKIFDNCLERNTEVW 297
                  ++  +++LG     D+ V  S + MYA+    G  D +RK+F+   E N   W
Sbjct: 71  LLALGKQLHSRVIRLG--LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 298 NTMIGGYVQNNH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
             +I  Y Q+     EAIELF +++    I  +  +F S L A   L +   G+Q+++Y 
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K  +A    V N++I                    E+++VS+N ++  + +N   +E  
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
           +L  E+   G  I + T  +LLS A+++     G+Q H  LL+ G    + + + LI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           ++ G I+ A Q+F  N+  DR+  +W +MI G+ ++G    A   F +MLE    PN +T
Sbjct: 308 SRCGNIEAAFQVF--NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             +VL AC+ +G I  G++                      MY + G+          +P
Sbjct: 366 YVAVLSACSHVGMISEGQK------------------HFNSMYKEHGI----------VP 397

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                 Y  M+   G+ G+   A+    SM    +  DA+ +  +L AC   G  + G  
Sbjct: 398 RMEH--YACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNTELGRH 452

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
             +++ ++    P+   Y  ++++    G+  +  +  K + E   + E
Sbjct: 453 AAEMILEQEPDDPAA--YILLSNLHASAGQWKDVVKIRKSMKERNLIKE 499



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 41/430 (9%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    +R++F+ +     + W  II  +        EAI L+ +M   S +   
Sbjct: 102 AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM--ISGHIRP 159

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++++SSVLKAC    +   G+ V+ + ++        V NSL++MY+      DA    
Sbjct: 160 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR--- 216

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N+V++N IV  Y K  +  EA   F  +   GI  S
Sbjct: 217 ---------------KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++G L+K G  Y ++  + ++ I MY+  G  + A ++
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQV 319

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   +RN   W +MI G+ ++     A+E+F ++LE      +++T+++ LSA S +  
Sbjct: 320 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP-NEITYVAVLSACSHVGM 378

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +  GQ+    + K    +P           +  +  M+    ++GL  E +  +  M   
Sbjct: 379 ISEGQKHFNSMYKEHGIVP----------RMEHYACMVDLLGRSGLLVEAMEFINSMP-- 426

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG----LI 461
             M D++    LL A     N ++G+     +L            L +++A +G    ++
Sbjct: 427 -LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 485

Query: 462 KTARQIFEKN 471
           K  + + E+N
Sbjct: 486 KIRKSMKERN 495



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     V +N I+ G+  N    EA LL++++  +    
Sbjct: 201 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 260

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   ++     ++ + N+L++MYS C  +++A  
Sbjct: 261 SA--FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC-GNIEAAF 317

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF+ M  RNV++W ++++ + K      A+  F  ML  G +
Sbjct: 318 -----------------QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360

Query: 224 PSTISFVNVFPALSSLG 240
           P+ I++V V  A S +G
Sbjct: 361 PNEITYVAVLSACSHVG 377


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 199/661 (30%), Positives = 340/661 (51%), Gaps = 86/661 (13%)

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           +Y+ ++    V  ++    + ++++++    K + + +++  F  M   G+ P +    N
Sbjct: 62  NYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPN 121

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           +F   + L  +K    ++ +    G +   D FV  S   MY   G    ARK+FD   +
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDM--DAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++    + ++  Y +     E + +                          L E++    
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRI--------------------------LSEME---- 209

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                            ++ IE ++VSWN ++S F ++G   E +++  ++   GF  D 
Sbjct: 210 -----------------SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGI----------------------------H 443
           VTV+++L +  +    ++G+  H Y+++ G+                             
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ 312

Query: 444 FEGMESYLIDMY----AKSGLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           FE ME+ + + Y    +++GL+  A ++FE  K  + + +  +W ++IAG  QNG   EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              FR+M    V PN VTI S+LPAC  +  +  G+  HGF++R  L  NV VG++LIDM
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G IN +  VF  +P KN V + +++ G+  HG ++  +S+F S+    ++PD I+F
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            ++LSAC   GL DEG + F +M +EY I+P  EHY C+ ++LGR GK+ EAY+ +KE+ 
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E +   +WG+LL SCRL  + +LAE+ A+KL  ++  N  PG +VLLSNIYA +G W  
Sbjct: 553 FEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN--PGTYVLLSNIYAAKGMWTE 609

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           VD +R +M   GL+K  GCSWI V   V    + D+ HPQ  +I E ++ ++ EMR +G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669

Query: 798 K 798
           +
Sbjct: 670 R 670



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 213/505 (42%), Gaps = 86/505 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +  SI  PT   ++++I       L  ++I ++S+M         D++   ++ K C
Sbjct: 69  ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP--DSHVLPNLFKVC 126

Query: 118 AETRNLRIGKAVHCHFIRCFS--NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD--- 172
           AE    ++GK +HC  + C S  +   FV  S+ +MY  C    DA  V  +  + D   
Sbjct: 127 AELSAFKVGKQIHC--VSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184

Query: 173 -------YSK---YDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                  Y++    + V ++   M       N+V+WN I+S + ++  + EAV  F+ + 
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-- 276
            +G  P  ++  +V P++          +++G ++K G   + D  V S+ I MY +   
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG--LLKDKCVISAMIDMYGKSGH 302

Query: 277 -----------------------------GCFDFARKIF----DNCLERNTEVWNTMIGG 303
                                        G  D A ++F    +  +E N   W ++I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
             QN   +EA+ELF + +++  +  + VT  S L A   +  L  G+  H + ++     
Sbjct: 363 CAQNGKDIEALELFRE-MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421

Query: 359 ---------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                            + L  IV N +  +++V WN++++ F  +G   E + +   + 
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSGL 460
           +     D ++ T+LLSA   +   D G +    +   +GI    +E Y  ++++  ++G 
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK-PRLEHYSCMVNLLGRAGK 540

Query: 461 IKTARQIFEKNDSGDRDQATWNAMI 485
           ++ A  +  K    + D   W A++
Sbjct: 541 LQEAYDLI-KEMPFEPDSCVWGALL 564



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 39/445 (8%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-D 106
           K C E    +  ++  S      V WN I+ GF  +    EA++++   +K      C D
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF---QKIHHLGFCPD 251

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS---------TCLS 157
             T SSVL +  ++  L +G+ +H + I+      + V +++++MY          +  +
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311

Query: 158 SLDAEMVGL--KYVEVDYSKYDLVCK---VFDTMRRR----NVVAWNTIVSWYVKTERYV 208
             +    G+   Y+    S+  LV K   +F+  + +    NVV+W +I++   +  + +
Sbjct: 312 QFEMMEAGVCNAYI-TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+  FR M   G++P+ ++  ++ PA  ++         +G  V++    ++++ V S+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV--HLLDNVHVGSA 428

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I MYA+ G  + ++ +F+    +N   WN+++ G+  +    E + +F  ++    +  
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR-TRLKP 487

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           D ++F S LSA  Q+   D G +    + + +   P           +  ++ M++   +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP----------RLEHYSCMVNLLGR 537

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            G   E   L+ EM    F  DS    ALL++     N D+ +     L        G  
Sbjct: 538 AGKLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDS 473
             L ++YA  G+      I  K +S
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMES 619


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 230/731 (31%), Positives = 382/731 (52%), Gaps = 55/731 (7%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           EA+ LY +++ S    S D +   S+LKAC+ T +  +G A+H   I+     S  + NS
Sbjct: 30  EALQLYHEIRISGAQLS-DTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSSTSIANS 87

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
            ++ Y             +KY ++D ++     + FD+ + ++ V+WN +V         
Sbjct: 88  TIDFY-------------MKYGDLDSAQ-----RAFDSTKNKDSVSWNVMVHGNFSNGSI 129

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           +  +  F        +P+  S + V  A   L  Y      +G + + G   +  L V +
Sbjct: 130 MAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAI--LSVQN 187

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           S + +YAE+  + FA K+F     RN  V W+ MIGG+VQ     +   +F  ++    I
Sbjct: 188 SLLSLYAEVHMY-FAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGI 246

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             D VT +S L A + L+++ LG  +H  +I   +   + V N++I              
Sbjct: 247 PPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFK 306

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 E++++SWN M+SA++ N    E L L+  M ++G   D VT+  +L  A +  +
Sbjct: 307 AFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLD 366

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYL---IDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
               +  H  ++R G  +E  E  L   ID YAK  L++ AR +F+  +   +D   W+ 
Sbjct: 367 SLKCRSVHGVIIRKG--YESNELLLNSVIDAYAKCNLVELARMVFDGMNK--KDVVAWST 422

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIAG+ +NG  +EA   F+QM E  V PN V+I +++ AC     +   K  HG ++R  
Sbjct: 423 MIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRG 481

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L   V +GTS+IDMYSK G I  +   F +IP+KN V ++ MI  +  +G++  AL LF 
Sbjct: 482 LASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFE 541

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            +K  G +P+A+T +++LSACS+ GL++EGL  F  M Q++ I+P  EHY C+ DML R 
Sbjct: 542 KIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRA 601

Query: 664 GKVVEAYEFVKELGEEGNV-LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
           GK  EA E +++L +E      IWG+LL SCR +G+  L    A ++L+++  +S  GY 
Sbjct: 602 GKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSS-AGY- 659

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           +L SN+YA  G   +  K+R+  +E+G++   G S + +     RF + D  +P++ +IY
Sbjct: 660 MLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIY 719

Query: 783 EMLERLAMEMR 793
            M+++L   M+
Sbjct: 720 LMVKKLHGVMK 730



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 263/545 (48%), Gaps = 53/545 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++ FDS     +V WN ++ G   N      +  +  +K    +   +  +   V++A 
Sbjct: 101 AQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWF--IKGRFAHFQPNISSLLLVIQAF 158

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E +    G A H +  R   +    V NSLL++Y+               V + ++   
Sbjct: 159 RELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAE--------------VHMYFAH-- 202

Query: 178 LVCKVFDTMRRRN-VVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPA 235
              K+F  M  RN VV+W+ ++  +V+     +    FR M+   GI P  ++ V+V  A
Sbjct: 203 ---KLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF--ARKIFDNCLERN 293
            ++L D     +V+GL++  G E  +DLFV +S I MY++  CF+   A K F    E+N
Sbjct: 260 CTNLKDISLGTMVHGLVIFRGLE--DDLFVGNSLIDMYSK--CFNVHSAFKAFKEIPEKN 315

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVL----ELDEIVFDDVT-----FLSALSAVS--- 341
              WN M+  Y+ N   +EA+ L   ++    E DE+   +V      FL +L   S   
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 342 -------QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
                  +  EL L   + AY   N V L  +V + + ++DVV+W+TMI+ F +NG  DE
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            + +  +M ++  + ++V++  L+ A +        K  H   +R G+  E  + + +ID
Sbjct: 436 AISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIID 494

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I+ + + F  N    ++   W+AMI+ +  NGL  EA + F ++ ++   PN 
Sbjct: 495 MYSKCGDIEASIRAF--NQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNA 552

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT  S+L AC+  G +E G       + ++ ++  +   + ++DM S++G  N A  +  
Sbjct: 553 VTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIE 612

Query: 573 KIPEK 577
           K+P++
Sbjct: 613 KLPKE 617



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/410 (21%), Positives = 186/410 (45%), Gaps = 43/410 (10%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H A + F  I     + WN ++  ++ N    EA+ L   M +       D  T ++VL+
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEK--DEVTLANVLQ 359

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
                 +    ++VH   IR     +  + NS+++ Y+ C                  + 
Sbjct: 360 IAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKC------------------NL 401

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            +L   VFD M +++VVAW+T+++ + +  +  EA+  F+ M    + P+ +S +N+  A
Sbjct: 402 VELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEA 460

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +   + + +   +G+ V+ G    +++ + +S I MY++ G  + + + F+   ++N  
Sbjct: 461 CAVSAELRQSKWAHGIAVRRG--LASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVV 518

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI  +  N    EA+ LF ++ + +    + VT LS LSA S    ++ G      
Sbjct: 519 CWSAMISAFRINGLAHEALMLFEKIKQ-NGTKPNAVTALSLLSACSHGGLMEEGLSFFTS 577

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +++             IE  +  ++ ++    + G  +E L L+ ++ K+     S+  T
Sbjct: 578 MVQKH----------GIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGT 627

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES--YLI--DMYAKSGLI 461
            LLS+  +  N  +G    + +L+     E + S  Y++  ++YA  GL+
Sbjct: 628 -LLSSCRSYGNISLGSGAASRVLQ----LEPLSSAGYMLASNLYANCGLM 672


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 216/754 (28%), Positives = 374/754 (49%), Gaps = 62/754 (8%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +   C+ G    AR +FD +     V WN +I G   +  P EA+ ++ +M+      
Sbjct: 139 SLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEG--F 196

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D  +  ++  A +   ++   K++H + +R   +    V NSL++MY  C     A+ 
Sbjct: 197 EVDKVSILNLAPAVSRLGDVGCCKSIHGYVVR--RSICGVVSNSLIDMYCKCGDVHSAQ- 253

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VFD M  R+ V+W T+++ YVK   Y E ++    M R  ++
Sbjct: 254 -----------------RVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            + ++ VN    ++ + D +    +Y   +++G   ++D+ VA+  + MYA+ G    AR
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMG--LMSDIVVATPIVCMYAKCGELKKAR 354

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F +   R+   W+  +   V+  +P E + +F QV++ + +  D       +S  +++
Sbjct: 355 ELFLSLEGRDLVAWSAFLSALVETGYPREVLSIF-QVMQYEGLKPDKAILSILVSGCTEI 413

Query: 344 QELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMI 383
             + LG+ +H Y IK                          + + N +  +D+V WNT+I
Sbjct: 414 SNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLI 473

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + F + G     L +   +Q  G + DS T+  L SA + + + D+G   H      GI 
Sbjct: 474 NGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHG-----GIE 528

Query: 444 FEGMES------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
             G ES       L+DMYAK G + +  ++F       +D+ +WN MIAGY  NG   EA
Sbjct: 529 KSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHV-KDEVSWNVMIAGYLHNGYSNEA 587

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              FR+M   NV PN+VT  ++LPA + +  +      H   IR        +G SLIDM
Sbjct: 588 ISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDM 647

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G + Y+   F ++  K+++++  M+  Y  HG  E A++LF  M+   +  D++++
Sbjct: 648 YAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSY 707

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           ++VLSAC ++GL+ EG  IF  M +++ ++PS EHY C+ D+LG  G   E    + ++ 
Sbjct: 708 ISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMT 767

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E +   +WG+LL +C++H +  L EV    LL+++ RN  P +HV+LS+IYA+ G W +
Sbjct: 768 TEPDA-RVWGALLAACKIHSNVTLGEVAVHHLLKLEPRN--PVHHVVLSDIYAQCGRWND 824

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
             + R  +   GL+K  G SW  VG + N    K
Sbjct: 825 ARRTRSHINNHGLKKIPGYSW--VGAHKNEMEKK 856



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 254/472 (53%), Gaps = 28/472 (5%)

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           F  ++  +++ +N+ +  Y K   + +A+  +  +L++G++P   +F  V  A +S  D+
Sbjct: 56  FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDF 115

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                +Y  +V  G E   D+++ +S I M+ ++GC D AR +FD    ++   WN MI 
Sbjct: 116 HEGVNIYKDIVFNGLEC--DVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMIS 173

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G  Q+ +P EA+E+F + ++++    D V+ L+   AVS+L ++   + +H Y+++   +
Sbjct: 174 GLSQSLNPCEALEMFWR-MQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRR--S 230

Query: 363 LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
           +  +V N++I+                    RD VSW TM++ +V+NG   EGL L+++M
Sbjct: 231 ICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM 290

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           ++    ++ V V   L   + +R+ + GK+ + Y L+ G+  +  + + ++ MYAK G +
Sbjct: 291 RRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGEL 350

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           K AR++F   +   RD   W+A ++   + G   E    F+ M    + P+   ++ ++ 
Sbjct: 351 KKARELFLSLEG--RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVS 408

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
            C  + NI LGK +H ++I+  ++ ++ + T+L+ MY +  +  YA  +F ++  K+ V 
Sbjct: 409 GCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVV 468

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + T+I G+ ++G    AL +F  ++  GI PD+ T V + SAC+    +D G
Sbjct: 469 WNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 174/687 (25%), Positives = 317/687 (46%), Gaps = 52/687 (7%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F  I  P+ +++N+ I  +   +  ++AI LY  + K       D +T++ VLKAC    
Sbjct: 56  FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKP--DKFTFNFVLKACTSAL 113

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           +   G  ++   +        ++  SL++M+   +  LD                     
Sbjct: 114 DFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCK-MGCLDNAR-----------------N 155

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD M  ++ V WN ++S   ++    EA+  F  M   G     +S +N+ PA+S LGD
Sbjct: 156 VFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGD 215

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++G +V+     V    V++S I MY + G    A+++FD    R+   W TM+
Sbjct: 216 VGCCKSIHGYVVRRSICGV----VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMM 271

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-- 359
            GYV+N    E ++L +  +    +  + V  ++AL  V+++++L+ G++++ Y ++   
Sbjct: 272 AGYVKNGCYFEGLQL-LHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGL 330

Query: 360 ----FVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                VA P++ + A              +  RD+V+W+  +SA V+ G   E L +   
Sbjct: 331 MSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQV 390

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
           MQ +G   D   ++ L+S  + + N  +GK  H Y ++  +  +  M + L+ MY +  L
Sbjct: 391 MQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFEL 450

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
              A  +F  N    +D   WN +I G+T+ G    A   F ++    + P+  T+  + 
Sbjct: 451 FTYAMTLF--NRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLF 508

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNS 579
            AC  M +++LG  LHG   +   + ++ V  +L+DMY+K G +     +F      K+ 
Sbjct: 509 SACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDE 568

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI GY  +G S  A+S FR MK   + P+ +TFV +L A SY  ++ E +  F  
Sbjct: 569 VSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA-FHT 627

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
                     T     + DM  + G++  + +   E+  +  +   W ++L +  +HG  
Sbjct: 628 CIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTI--SWNAMLSAYAMHGQG 685

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLS 726
           ELA  +   + E + R     Y  +LS
Sbjct: 686 ELAVALFSVMQESNVRVDSVSYISVLS 712


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 191/569 (33%), Positives = 304/569 (53%), Gaps = 54/569 (9%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D+A+++FD     N   WNT+I  Y  +++P +++ +F+++L       D  TF   + 
Sbjct: 85  LDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIK 144

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
           A S+L+EL  G+  H  +IK  +   V +LN++I                     RDVVS
Sbjct: 145 AASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVS 204

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN+MI+AFVQ G  +E L L  EM+ Q    + +T+  +LSA +   + + G+  H+Y+ 
Sbjct: 205 WNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIE 264

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD---------------------- 475
           R+ I     + + ++DMY K G ++ A+++F+K    D                      
Sbjct: 265 RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQG 324

Query: 476 -------RDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMG 527
                  +D A WNA+I+ Y Q G  +EA   F ++ L     P+ VT+ S L AC  +G
Sbjct: 325 IFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLG 384

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            ++LG  +H +  +  +  N  + TSLIDMY K G +  A  VF  +  K+   ++ MI 
Sbjct: 385 AMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIA 444

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           G   HG  + A++LF  M+   ++P+A+TF  +L ACS+ GLV+EG   F+ M+  Y + 
Sbjct: 445 GLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVL 504

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P  +HY C+ D+LGR G + EA E ++++        +WG+LLG+C +H +  LAE    
Sbjct: 505 PGVKHYACMVDILGRAGLLEEAVELIEKM-PMAPAASVWGALLGACTIHENVVLAEQACS 563

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
           +L+E++  N   G +VLLSNIYA+ G W+ V  +RK MR+ GL+KE GCS I+V G V+ 
Sbjct: 564 QLIELEPGNH--GAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHE 621

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F   D  HP + KIY  L+ +   +   G
Sbjct: 622 FLVGDNSHPSAKKIYAKLDEIVARLETIG 650



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 251/541 (46%), Gaps = 80/541 (14%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHL--ARQLFDSITRPTTVIWNTIIIG 79
           QL QIH+          P   SRL +       P L  A+Q+FD I  P    WNT+I  
Sbjct: 50  QLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRA 109

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +  ++ P++++L++ +M   SP    D +T+  ++KA +E   L  GKA H   I+    
Sbjct: 110 YASSSNPHQSLLIFLRMLHQSPDFP-DKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              F+ NSL++ Y+ C        +GL Y            +VF  + RR+VV+WN++++
Sbjct: 169 SDVFILNSLIHFYAKCGE------LGLGY------------RVFVNIPRRDVVSWNSMIT 210

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG--------- 250
            +V+     EA+  F+ M    ++P+ I+ V V  A +   D++    V+          
Sbjct: 211 AFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGE 270

Query: 251 ----------LLVKLGS-EYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCL 290
                     +  K GS E    LF           ++ +  YA++G +D A+ IFD   
Sbjct: 271 SLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMP 330

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            ++   WN +I  Y Q   P EA+ELF ++        D+VT +S LSA +QL  +DLG 
Sbjct: 331 NQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGG 390

Query: 351 QLHAYIIKNFVAL--------------------PVIVLNAVIERDVVSWNTMISAFVQNG 390
            +H YI K  + L                     ++V ++V  +DV  W+ MI+    +G
Sbjct: 391 WIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHG 450

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LRHGIHFEGMES 449
              + + L  +MQ+     ++VT T +L A S++   + G+     + L +G+   G++ 
Sbjct: 451 HGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGV-LPGVKH 509

Query: 450 Y--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT--QNGLLEEAFVAFRQML 505
           Y  ++D+  ++GL++ A ++ EK        + W A++   T  +N +L E   A  Q++
Sbjct: 510 YACMVDILGRAGLLEEAVELIEKMPMAPA-ASVWGALLGACTIHENVVLAEQ--ACSQLI 566

Query: 506 E 506
           E
Sbjct: 567 E 567


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/545 (35%), Positives = 316/545 (57%), Gaps = 40/545 (7%)

Query: 285 IFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           +F+   +R T+V  WN++I    +     E++  F  + +LD I  +  TF  A+ + S 
Sbjct: 37  LFNKYFDR-TDVYSWNSLIAELARGGDSCESLRAFSWMRKLD-IKPNRSTFPCAIKSCSA 94

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
           L +L+ G+Q H   +       + V +A+I+                    R++V+W ++
Sbjct: 95  LFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154

Query: 383 ISAFVQNGLDDEGLMLVYEM---------QKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           I+ +VQN    E LM+  E          ++ G  +DSV + ++LSA S + N+ V +  
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV 214

Query: 434 HAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H   ++ G+    G+E+ L+D YAK G +  +R++F+  D  ++D  +WN+MIA Y QNG
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFD--DMAEKDVVSWNSMIAVYAQNG 272

Query: 493 LLEEAFVAFRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           L  +AF  F  ML+      N VT++++L AC   G + +G  LH   I+     NV + 
Sbjct: 273 LSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMA 332

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           TS+IDMY K G    A N F  + EKN  ++T MI GYG HG +  AL +F  M   G++
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           P+ ITF++VL+ACS+AG ++EG + F+ M  EY ++P  EHY C+ D+LGR G + EAY 
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYN 452

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            +K +    + + +WGSLL +CR+H   ELAE+ A++L ++D  N   GY+VLL+NIYA+
Sbjct: 453 LIKSMKVRRDFV-LWGSLLAACRIHKDVELAEISARELFKLDPSNC--GYYVLLANIYAD 509

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G W++V+++R  +++RGL K  G S +++ G V+ F   D+EHPQ  KIY+ LE L+++
Sbjct: 510 AGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVK 569

Query: 792 MRNAG 796
           ++ AG
Sbjct: 570 LQEAG 574



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 208/424 (49%), Gaps = 38/424 (8%)

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  K FD   R +V +WN++++   +     E++R F  M ++ I+P+  +F     + S
Sbjct: 37  LFNKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCS 93

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L D  S    +   +  G E  +DLFV+S+ I MY++ G    AR +FD    RN   W
Sbjct: 94  ALFDLNSGKQAHQQALVFGFE--SDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151

Query: 298 NTMIGGYVQNNHPVEAIELFVQVL--------ELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ++I GYVQN+   EA+ +F + L        E      D V  +S LSA S++    + 
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
           + +H   IK                      V+L   V + + E+DVVSWN+MI+ + QN
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271

Query: 390 GLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGM 447
           GL  +   + + M K  G   + VT++ LL A ++     VG   H  +++ G ++   M
Sbjct: 272 GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIM 331

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + +IDMY K G  + AR  F+     +++  +W AMIAGY  +G   EA   F QM+  
Sbjct: 332 ATSIIDMYCKCGQAEMARNAFDGMK--EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWA 389

Query: 508 NVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            V PN +T  SVL AC+  G +E G +  +  S  Y ++  V     ++D+  ++G I  
Sbjct: 390 GVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKE 449

Query: 567 AANV 570
           A N+
Sbjct: 450 AYNL 453



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 220/484 (45%), Gaps = 63/484 (13%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           L  + FD   R     WN++I          E++  +S M+K       +  T+   +K+
Sbjct: 37  LFNKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLD--IKPNRSTFPCAIKS 91

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+   +L  GK  H   +        FV ++L++MYS C    +A ++            
Sbjct: 92  CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVL------------ 139

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML---------RMGIRPSTI 227
                 FD + RRN+V W ++++ YV+ +   EA+  F+  L          +G    ++
Sbjct: 140 ------FDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + ++V  A S + +   ++ V+G+ +K+G + V  + V ++ +  YA+ G    +RK+FD
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVGLDKV--MGVENTLLDAYAKCGEVSLSRKVFD 251

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           +  E++   WN+MI  Y QN    +A E+F  +L+     +++VT  + L A +    L 
Sbjct: 252 DMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALR 311

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           +G  LH  +IK      VI+  ++I                    E++V SW  MI+ + 
Sbjct: 312 VGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYG 371

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-----KQTHAYLLRHGI 442
            +G   E L + Y+M   G   + +T  ++L+A S+    + G       +H Y +  G+
Sbjct: 372 MHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGV 431

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
              G    ++D+  ++G IK A  +  K+    RD   W +++A    +  +E A ++ R
Sbjct: 432 EHYGC---MVDLLGRAGYIKEAYNLI-KSMKVRRDFVLWGSLLAACRIHKDVELAEISAR 487

Query: 503 QMLE 506
           ++ +
Sbjct: 488 ELFK 491



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 153/305 (50%), Gaps = 29/305 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ--MKKSSPY-----TSC 105
           G+   AR LFD I R   V W ++I G+V N+  +EA++++ +   +KS        TS 
Sbjct: 131 GKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSV 190

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+    SVL AC+   N  + + VH   I+   +    V N+LL+ Y+ C          
Sbjct: 191 DSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKC---------- 240

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP 224
               EV  S+     KVFD M  ++VV+WN++++ Y +     +A   F  ML+  G + 
Sbjct: 241 ---GEVSLSR-----KVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKY 292

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + ++   +  A +  G  +    ++  ++K+G  YVN++ +A+S I MY + G  + AR 
Sbjct: 293 NEVTLSTLLLACAHEGALRVGMCLHDQVIKMG--YVNNVIMATSIIDMYCKCGQAEMARN 350

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            FD   E+N   W  MI GY  +    EA+++F Q++    +  + +TF+S L+A S   
Sbjct: 351 AFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMI-WAGVKPNYITFISVLAACSHAG 409

Query: 345 ELDLG 349
            L+ G
Sbjct: 410 FLEEG 414


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/544 (36%), Positives = 317/544 (58%), Gaps = 39/544 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   ERN   W  MI  + Q     +AI+LF+  +EL   V D  T+ S LSA +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLD-MELSGYVPDRFTYSSVLSACT 62

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI-----------------------ERDVVS 378
           +L  L LG+QLH+ +I+  +AL V V  +++                       E +V+S
Sbjct: 63  ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122

Query: 379 WNTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           W  +I+A+ Q+G  D E + L  +M       +  + +++L A  NL +   G+Q ++Y 
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDRDQATWNAMIAGYTQNG 492
           ++ GI     + + LI MYA+SG ++ AR+    +FEKN        ++NA++ GY +N 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN------LVSYNAIVDGYAKNL 236

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             EEAF+ F ++ +  +  +  T AS+L     +G +  G+Q+HG  ++     N  +  
Sbjct: 237 KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +LI MYS+ G I  A  VF ++ ++N +++T+MI G+ +HG + RAL +F  M   G +P
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP 356

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           + IT+VAVLSACS+ G++ EG + F+ M +E+ I P  EHY C+ D+LGR G +VEA EF
Sbjct: 357 NEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEF 416

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +  +    + L +W +LLG+CR+HG++EL    A+ +LE +  +  P  ++LLSN++A  
Sbjct: 417 INSMPLMADAL-VWRTLLGACRVHGNTELGRHAAEMILEQEPDD--PAAYILLSNLHASA 473

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W++V K+RK M+ER L KE GCSWI+V   V+RF   +  HPQ+ +IY+ L++LA ++
Sbjct: 474 GQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKI 533

Query: 793 RNAG 796
           +  G
Sbjct: 534 KEMG 537



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 218/474 (45%), Gaps = 46/474 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V W  +I  F       +AI L+  M+ S      D +TYSSVL AC
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP--DRFTYSSVLSAC 61

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            E   L +GK +H   IR        V  SL++MY+ C +             VD S+  
Sbjct: 62  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD----------GSVDDSR-- 109

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              KVF+ M   NV++W  I++ Y ++ E   EA+  F  M+   IRP+  SF +V  A 
Sbjct: 110 ---KVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 166

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +L D  + + VY   VKLG   VN   V +S I MYA  G  + ARK FD   E+N   
Sbjct: 167 GNLSDPYTGEQVYSYAVKLGIASVN--CVGNSLISMYARSGRMEDARKAFDILFEKNLVS 224

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +N ++ GY +N    EA  LF ++ +   I     TF S LS  + +  +  G+Q+H  +
Sbjct: 225 YNAIVDGYAKNLKSEEAFLLFNEIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRL 283

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K        + NA+I                    +R+V+SW +MI+ F ++G     L
Sbjct: 284 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 343

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LID 453
            + ++M + G   + +T  A+LSA S++     G K  ++    HGI    ME Y  ++D
Sbjct: 344 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI-VPRMEHYACMVD 402

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +  +SGL+  A + F  +     D   W  ++     +G  E    A   +LE 
Sbjct: 403 LLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQ 455



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 65/529 (12%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD M  RN+V W  +++ + +     +A+  F  M   G  P   ++ +V  A + LG
Sbjct: 6   KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL---GCFDFARKIFDNCLERNTEVW 297
                  ++  +++LG     D+ V  S + MYA+    G  D +RK+F+   E N   W
Sbjct: 66  LLALGKQLHSRVIRLG--LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 298 NTMIGGYVQNNH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
             +I  Y Q+     EAIELF +++    I  +  +F S L A   L +   G+Q+++Y 
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K  +A    V N++I                    E+++VS+N ++  + +N   +E  
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
           +L  E+   G  I + T  +LLS A+++     G+Q H  LL+ G    + + + LI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           ++ G I+ A Q+F  N+  DR+  +W +MI G+ ++G    A   F +MLE    PN +T
Sbjct: 303 SRCGNIEAAFQVF--NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             +VL AC+ +G I  G++                      MY + G+          +P
Sbjct: 361 YVAVLSACSHVGMISEGQK------------------HFNSMYKEHGI----------VP 392

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                 Y  M+   G+ G+   A+    SM    +  DA+ +  +L AC   G  + G  
Sbjct: 393 RMEH--YACMVDLLGRSGLLVEAMEFINSMP---LMADALVWRTLLGACRVHGNTELGRH 447

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
             +++ ++    P+   Y  ++++    G+  +  +  K + E   + E
Sbjct: 448 AAEMILEQEPDDPAA--YILLSNLHASAGQWKDVVKIRKSMKERNLIKE 494



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 41/430 (9%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSC 105
           +K   +G    +R++F+ +     + W  II  +        EAI L+ +M   S +   
Sbjct: 97  AKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM--ISGHIRP 154

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +++++SSVLKAC    +   G+ V+ + ++        V NSL++MY+      DA    
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR--- 211

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          K FD +  +N+V++N IV  Y K  +  EA   F  +   GI  S
Sbjct: 212 ---------------KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F ++    +S+G     + ++G L+K G  Y ++  + ++ I MY+  G  + A ++
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGG--YKSNQCICNALISMYSRCGNIEAAFQV 314

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   +RN   W +MI G+ ++     A+E+F ++LE      +++T+++ LSA S +  
Sbjct: 315 FNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKP-NEITYVAVLSACSHVGM 373

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +  GQ+    + K    +P           +  +  M+    ++GL  E +  +  M   
Sbjct: 374 ISEGQKHFNSMYKEHGIVP----------RMEHYACMVDLLGRSGLLVEAMEFINSMP-- 421

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG----LI 461
             M D++    LL A     N ++G+     +L            L +++A +G    ++
Sbjct: 422 -LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 480

Query: 462 KTARQIFEKN 471
           K  + + E+N
Sbjct: 481 KIRKSMKERN 490



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + GR   AR+ FD +     V +N I+ G+  N    EA LL++++  +    
Sbjct: 196 SLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGI 255

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S   +T++S+L   A    +  G+ +H   ++     ++ + N+L++MYS C  +++A  
Sbjct: 256 SA--FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC-GNIEAAF 312

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF+ M  RNV++W ++++ + K      A+  F  ML  G +
Sbjct: 313 -----------------QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 355

Query: 224 PSTISFVNVFPALSSLG 240
           P+ I++V V  A S +G
Sbjct: 356 PNEITYVAVLSACSHVG 372


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 199/661 (30%), Positives = 340/661 (51%), Gaps = 86/661 (13%)

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
           +Y+ ++    V  ++    + ++++++    K + + +++  F  M   G+ P +    N
Sbjct: 62  NYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPN 121

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           +F   + L  +K    ++ +    G +   D FV  S   MY   G    ARK+FD   +
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDM--DAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++    + ++  Y +     E + +                          L E++    
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRI--------------------------LSEME---- 209

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                            ++ IE ++VSWN ++S F ++G   E +++  ++   GF  D 
Sbjct: 210 -----------------SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGI----------------------------H 443
           VTV+++L +  +    ++G+  H Y+++ G+                             
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ 312

Query: 444 FEGMESYLIDMY----AKSGLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           FE ME+ + + Y    +++GL+  A ++FE  K  + + +  +W ++IAG  QNG   EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              FR+M    V PN VTI S+LPAC  +  +  G+  HGF++R  L  NV VG++LIDM
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G IN +  VF  +P KN V + +++ G+  HG ++  +S+F S+    ++PD I+F
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            ++LSAC   GL DEG + F +M +EY I+P  EHY C+ ++LGR GK+ EAY+ +KE+ 
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E +   +WG+LL SCRL  + +LAE+ A+KL  ++  N  PG +VLLSNIYA +G W  
Sbjct: 553 FEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN--PGTYVLLSNIYAAKGMWTE 609

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           VD +R +M   GL+K  GCSWI V   V    + D+ HPQ  +I E ++ ++ EMR +G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669

Query: 798 K 798
           +
Sbjct: 670 R 670



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/505 (21%), Positives = 213/505 (42%), Gaps = 86/505 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +  SI  PT   ++++I       L  ++I ++S+M         D++   ++ K C
Sbjct: 69  ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP--DSHVLPNLFKVC 126

Query: 118 AETRNLRIGKAVHCHFIRCFS--NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD--- 172
           AE    ++GK +HC  + C S  +   FV  S+ +MY  C    DA  V  +  + D   
Sbjct: 127 AELSAFKVGKQIHC--VSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184

Query: 173 -------YSK---YDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                  Y++    + V ++   M       N+V+WN I+S + ++  + EAV  F+ + 
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-- 276
            +G  P  ++  +V P++          +++G ++K G   + D  V S+ I MY +   
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG--LLKDKCVISAMIDMYGKSGH 302

Query: 277 -----------------------------GCFDFARKIF----DNCLERNTEVWNTMIGG 303
                                        G  D A ++F    +  +E N   W ++I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
             QN   +EA+ELF + +++  +  + VT  S L A   +  L  G+  H + ++     
Sbjct: 363 CAQNGKDIEALELFRE-MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421

Query: 359 ---------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                            + L  IV N +  +++V WN++++ F  +G   E + +   + 
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSGL 460
           +     D ++ T+LLSA   +   D G +    +   +GI    +E Y  ++++  ++G 
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK-PRLEHYSCMVNLLGRAGK 540

Query: 461 IKTARQIFEKNDSGDRDQATWNAMI 485
           ++ A  +  K    + D   W A++
Sbjct: 541 LQEAYDLI-KEMPFEPDSCVWGALL 564



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 39/445 (8%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-D 106
           K C E    +  ++  S      V WN I+ GF  +    EA++++   +K      C D
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF---QKIHHLGFCPD 251

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS---------TCLS 157
             T SSVL +  ++  L +G+ +H + I+      + V +++++MY          +  +
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311

Query: 158 SLDAEMVGL--KYVEVDYSKYDLVCK---VFDTMRRR----NVVAWNTIVSWYVKTERYV 208
             +    G+   Y+    S+  LV K   +F+  + +    NVV+W +I++   +  + +
Sbjct: 312 QFEMMEAGVCNAYI-TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+  FR M   G++P+ ++  ++ PA  ++         +G  V++    ++++ V S+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV--HLLDNVHVGSA 428

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I MYA+ G  + ++ +F+    +N   WN+++ G+  +    E + +F  ++    +  
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR-TRLKP 487

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           D ++F S LSA  Q+   D G +    + + +   P           +  ++ M++   +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP----------RLEHYSCMVNLLGR 537

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            G   E   L+ EM    F  DS    ALL++     N D+ +     L        G  
Sbjct: 538 AGKLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDS 473
             L ++YA  G+      I  K +S
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMES 619


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 226/766 (29%), Positives = 390/766 (50%), Gaps = 93/766 (12%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            +A  LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V 
Sbjct: 124 EIAEVLFSKLRVRNVFSW-AAIIGVKCRIGLCEGALMGFVEMLENEIFP--DNFVVPNVC 180

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC   +  R G+ VH + ++       FV +SL +MY  C    DA             
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDAS------------ 228

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVFD +  RN VAWN ++  YV+  +  EA+R F  M + G+ P+ ++      
Sbjct: 229 ------KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++G  +     + + +  G E   D  + +S +  Y ++G  ++A  +FD   E++ 
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMEL--DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ     +AI +  Q++ L+++ +D VT  + +SA ++ + L LG+++  
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399

Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y I++     ++                    V ++ +E+D++ WNT+++A+ ++GL  E
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L Y MQ +G   + +T   ++   S LRN  V +    +L         M+S     
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLII--LSLLRNGQVDEAKDMFL--------QMQS----- 504

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
              SG+I               +  +W  M+ G  QNG  EEA +  R+M E  + PN  
Sbjct: 505 ---SGIIP--------------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVF-- 571
           +I   L AC  + ++ +G+ +HG+ IR L   + V + TSL+DMY+K G IN A  VF  
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607

Query: 572 ---AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
              +++P  N+     MI  Y  +G  + A++L+RS++G G++PD IT   VLSAC++AG
Sbjct: 608 KLYSELPLSNA-----MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            +++ ++IF  +  +  ++P  EHY  + D+L   G+  +A   ++E+  + +   I  S
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQ-S 721

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           L+ SC     +EL + +++KLLE +  NS  G +V +SN YA EG+W+ V K+R+ M+ +
Sbjct: 722 LVASCNKQRKTELVDYLSRKLLESEPENS--GNYVTISNAYAVEGSWDEVVKMREMMKAK 779

Query: 749 GLRKEVGCSWIDVGGY--VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           GL+K+ GCSWI + G   V+ F + D+ H + ++I  ML  L  +M
Sbjct: 780 GLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 264/525 (50%), Gaps = 29/525 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A  +F     RN   W  +
Sbjct: 85  DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE +EI  D+    +   A   L+    G+ +H Y++K+ 
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + +R+ V+WN ++  +VQNG ++E + L  
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+KQG     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + L++ Y K G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  +F++    ++D  TWN +I+GY Q GL+E+A    + M    +  + VT+A++
Sbjct: 324 LIEYAEMVFDR--MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+  + ++ + ++++DMY+K G I  A  VF    EK+ 
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G+S  AL LF  M+  G+ P+ IT+  ++ +    G VDE   +F L
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-L 500

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG---NVLEIWGSLLGSCRLH 696
             Q   I P+   +  + + + + G   EA  F++++ E G   N   I  + L +C   
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA-LSACAHL 559

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
               +   +   ++     +S+      L ++YA+ G+    +KV
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  G+Q+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 84  RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM +     D+  V  +  A   L+    G+  H Y+++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +     + S L DMY K G++  A ++F+  +  DR+   WNA++ GY QNG  EEA   
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFD--EIPDRNAVAWNALMVGYVQNGKNEEAIRL 261

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F  M +  V P  VT+++ L A   MG +E GKQ H  +I   ++ +  +GTSL++ Y K
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  VF ++ EK+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 322 VGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G ++     Q Y I+ S E    +A    DM  + G +V+A +     
Sbjct: 382 MSAAARTENLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436

Query: 677 GEEGNVLEIWGSLLGS 692
            E+  +L  W +LL +
Sbjct: 437 VEKDLIL--WNTLLAA 450



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   GKQ HA +L++G 
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A  +F K     R+  +W A+I    + GL E A +
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV--RNVFSWAAIIGVKCRIGLCEGALM 159

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+ ++  L+  VFV +SL DMY 
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A+ VF +IP++N+V +  +++GY Q+G +E A+ LF  M+  G+EP  +T   
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G V+EG Q
Sbjct: 280 CLSASANMGGVEEGKQ 295



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 195/450 (43%), Gaps = 77/450 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN II G+V   L  +AI +   M+      
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T ++++ A A T NL++GK V C+ IR        + +++++MY+ C S +DA+ 
Sbjct: 374 DC--VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK- 430

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+   ++++ WNT+++ Y ++    EA+R F  M   G+ 
Sbjct: 431 -----------------KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS I             
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMF-------------LQMQSSGII------------ 508

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  +   ALSA + L
Sbjct: 509 --------PNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHL 559

Query: 344 QELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNTM 382
             L +G+ +H YII+N     ++                     V  + +  ++   N M
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM 619

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ISA+   G   E + L   ++  G   D++T+T +LSA ++  + +   +    ++    
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679

Query: 443 HFEGMESY--LIDMYAKSGLIKTARQIFEK 470
               +E Y  ++D+ A +G  + A ++ E+
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEE 709


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 194/561 (34%), Positives = 315/561 (56%), Gaps = 31/561 (5%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            D F + + +  Y   G    A + FD    R+   WN M+ G  +N    EA+ LF ++
Sbjct: 102 GDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRM 161

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           + ++ +  D VT  S L     L +  L   +H Y +K+ +   + V NA+I+       
Sbjct: 162 V-MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGM 220

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        RD+V+WN++IS   Q G     + +   M+  G   D +T+ +L SA
Sbjct: 221 LEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            +   +   G+  H Y++R G     +   + ++DMYAK   I+ A+++F+      RD 
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPV--RDA 338

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHG 537
            +WN +I GY QNGL  EA   +  M +H  + P   T  SVLPA + +G ++ G ++H 
Sbjct: 339 VSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHA 398

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
            SI+  L+ +V+VGT +ID+Y+K G ++ A  +F + P +++  +  +I G G HG   +
Sbjct: 399 LSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAK 458

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           ALSLF  M+  GI PD +TFV++L+ACS+AGLVD+G   F++MQ  Y I+P  +HY C+ 
Sbjct: 459 ALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           DM GR G++ +A++F++ +  + +   IWG+LLG+CR+HG+ E+ +V ++ L E+D +N 
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDS-AIWGALLGACRIHGNVEMGKVASQNLFELDPKNV 577

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE--H 775
             GY+VL+SN+YA+ G W+ VD+VR  +R + L+K  G S I+V   VN F S +Q   H
Sbjct: 578 --GYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIH 635

Query: 776 PQSHKIYEMLERLAMEMRNAG 796
           PQ  +I   L  L  ++R+ G
Sbjct: 636 PQHEEIQRELLDLLAKIRSLG 656



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 149/573 (26%), Positives = 251/573 (43%), Gaps = 78/573 (13%)

Query: 12  PPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPT 69
           PP   A   P    Q+H+ +  +  L+     S   +    + GR   A + FD +    
Sbjct: 75  PPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRD 134

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
              WN ++ G   N    EA+ L+ +M       + D  T SSVL  C    +  +  A+
Sbjct: 135 VPAWNAMLSGLCRNARAAEAVGLFGRMVMEG--VAGDAVTVSSVLPMCVLLGDRALALAM 192

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           H + ++   +   FV N+++++Y   L  L+                  V KVFD M  R
Sbjct: 193 HLYAVKHGLDDELFVCNAMIDVYGK-LGMLEE-----------------VRKVFDGMSSR 234

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           ++V WN+I+S + +  +   AV  F  M   G+ P  ++ +++  A++  GD      V+
Sbjct: 235 DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVH 294

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             +V+ G + V D+   ++ + MYA+L   + A+++FD+   R+   WNT+I GY+QN  
Sbjct: 295 CYMVRRGWD-VGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGL 353

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EAI ++  + + + +     TF+S L A S L  L  G ++HA  IK  + L V V  
Sbjct: 354 ASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGT 413

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            VI+                    R    WN +IS    +G   + L L  +MQ++G   
Sbjct: 414 CVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISP 473

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D VT  +LL+A S           HA L+  G +F  M      M    G+   A+    
Sbjct: 474 DHVTFVSLLAACS-----------HAGLVDQGRNFFNM------MQTAYGIKPIAKH--- 513

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                      +  M+  + + G L++AF   R M    + P+     ++L AC   GN+
Sbjct: 514 -----------YACMVDMFGRAGQLDDAFDFIRNM---PIKPDSAIWGALLGACRIHGNV 559

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           E+GK +   ++  L  +NV     + +MY+K G
Sbjct: 560 EMGK-VASQNLFELDPKNVGYYVLMSNMYAKVG 591


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 221/775 (28%), Positives = 390/775 (50%), Gaps = 61/775 (7%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPY 87
           H +   +P   T +  + L+     G   +A  L   +  P  V WN ++ G+    +  
Sbjct: 86  HGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFR 145

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           + + L  +M +     + D  T + +LKAC    +L +G  +H   ++          ++
Sbjct: 146 DLVGLSIEMARCG--VAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSA 203

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           L++MY  C S  DA                     F  M  RN V+W  +++  V+ E+Y
Sbjct: 204 LVDMYGKCRSLEDA------------------LHFFHGMGERNSVSWGAVIAGCVQNEQY 245

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           +   R   ++ R               A++ L    +A  ++   +K  +++ +D  V +
Sbjct: 246 M---RGLELLCRC-------------KAITCL---STARQLHAHAIK--NKFSSDRVVGT 284

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
           + + +YA+      AR+ F        E  N M+ G V+     EA++LF Q +    I 
Sbjct: 285 AIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLF-QFMTRSGIG 343

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF-----VALPVIVLNAVIERDVVSWNTM 382
           F  V+     SA ++++  D+   +   I+  +     +    +V   + +RD VSWNT+
Sbjct: 344 FGVVSLSGVFSACAEVKGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTI 403

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+A  QN   ++ ++ + EM + G   D  T  ++L A + L++ + G   H   ++ G+
Sbjct: 404 IAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGL 463

Query: 443 HFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + S ++DMY K G+I  A ++ ++   G ++  +WN++IAG++ N   EEA   F
Sbjct: 464 GLDAFVSSTVVDMYCKCGMITEALKLHDR--IGGQELVSWNSIIAGFSLNKQSEEAQKFF 521

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +ML+  V P+  T A+VL +C  +  IELGKQ+HG  I+  +  + F+ ++L+DMY+K 
Sbjct: 522 SEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKC 581

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +  +  +F K+ + + V++  MI GY  HG    AL +F   +   + P+  TFVAVL
Sbjct: 582 GNMPDSQLMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVL 641

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
            ACS+ GL+D+G + F LM   YK++P  EH+ C+           EA +F++ +  E +
Sbjct: 642 RACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGPQ--------EALKFIRSMPLEAD 693

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + IW +LL  C++    E+AE  A  +L +D  +S    ++LLSN+YAE G W +V + 
Sbjct: 694 AV-IWKTLLSICKIRQDVEVAETAASNVLRLDPDDS--SVYILLSNVYAESGKWVDVSRT 750

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           R+ MR+  L+KE GCSWI+V   ++ F   ++ HP+S ++YEML  L  EM+ +G
Sbjct: 751 RRLMRQGRLKKEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSG 805



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 248/571 (43%), Gaps = 74/571 (12%)

Query: 109 TYSSVLKACAETRN--LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           T+S V + CA   +  L  G+A H   +     P+ FV N LL MY+ C  +  A  V  
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 167 KYVEVDYSKYDLVCKVF----DT---------MRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                D   ++ +   +    DT         M   +VV+WN ++S Y +   + + V  
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
              M R G+ P   +   +  A   L D      ++ L VK G E   D+   S+ + MY
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEM--DVRAGSALVDMY 208

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            +    + A   F    ERN+  W  +I G VQN   +  +EL  +           +T 
Sbjct: 209 GKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRC--------KAITC 260

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
           LS              +QLHA+ IKN  +   +V  A+++                    
Sbjct: 261 LST------------ARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPN 308

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
             V + N M+   V+ GL  E + L   M + G     V+++ + SA + ++  DV    
Sbjct: 309 HTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFDVD--- 365

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
               +R+ I         +D+Y K   +  A  +F++ +   RD  +WN +IA   QN  
Sbjct: 366 --VCVRNAI---------LDLYGKCKALVEAYLVFQEMEQ--RDSVSWNTIIAALEQNEC 412

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            E+  V   +ML   +  +  T  SVL AC  + ++E G  +HG +I+  L  + FV ++
Sbjct: 413 YEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 472

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           ++DMY K G+I  A  +  +I  +  V++ ++I G+  +  SE A   F  M   G++PD
Sbjct: 473 VVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPD 532

Query: 614 AITFVAVLSACSYAGLVDEGLQIF-DLMQQE 643
             T+  VL +C+    ++ G QI   +++QE
Sbjct: 533 HFTYATVLDSCANLATIELGKQIHGQIIKQE 563



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 36/212 (16%)

Query: 515 TIASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           T + V   C   G+  L  G+  H   +       +FV   L+ MY++ G   +A  VF 
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSL------------------------FRSMKG- 607
            +P +++V++ TM+  Y   G +  A SL                        FR + G 
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 608 ------CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
                 CG+ PD  T   +L AC     +  G+QI  L  +   ++        + DM G
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKT-GLEMDVRAGSALVDMYG 209

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +   + +A  F   +GE  +V   WG+++  C
Sbjct: 210 KCRSLEDALHFFHGMGERNSV--SWGAVIAGC 239


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 180/426 (42%), Positives = 262/426 (61%), Gaps = 8/426 (1%)

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RDVVSWNT+I+   QNG+ +E L +V EM K+    DS T++++L   +   N   GK+ 
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y +RHG   +  + S LIDMYAK   ++ +   F      +RD  +WN++IAG  QNG
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHL--LSNRDAISWNSIIAGCVQNG 279

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
             ++    FR+ML+  V P  V+ +SV+PAC  +  + LGKQLH + IR   D N F+ +
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIAS 339

Query: 553 SLIDMYSKSGVINYAANVFAKIP--EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           SL+DMY+K G I  A  +F KI   +++ V++T +I+G   HG +  A+SLF  M   G+
Sbjct: 340 SLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGV 399

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           +P  + F+AVL+ACS+AGLVDEG + F+ MQ+++ + P  EHY  VAD+LGR G++ EAY
Sbjct: 400 KPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAY 459

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +F+  +GEE     +W +LL +CR H + ELAE V  K+L +D  N   G HV++SNIY+
Sbjct: 460 DFISNMGEEPTG-SVWSTLLAACRAHKNIELAEKVVNKILLVDPGNM--GAHVIMSNIYS 516

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
               W +  K+R  MR+ GL+K   CSWI+VG  V+ F + D+ HP   KI E L  L  
Sbjct: 517 AAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLE 576

Query: 791 EMRNAG 796
           +M   G
Sbjct: 577 QMEKEG 582



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 187/377 (49%), Gaps = 44/377 (11%)

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           +QLHA I+K   A P            ++W  +I  +  +GL    L     ++  G   
Sbjct: 25  KQLHAQIVKTTKATP----------HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISP 74

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK----------- 457
           D     +LL A++  ++ ++ +  HA ++R G HF+    + L++MY+K           
Sbjct: 75  DRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEF 134

Query: 458 -----------SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
                      S  I + R++F++     RD  +WN +IAG  QNG+ EEA    ++M +
Sbjct: 135 PQARHNHNNKYSVKIDSVRKLFDRMPV--RDVVSWNTVIAGNAQNGMYEEALNMVKEMGK 192

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            N+ P+  T++S+LP      N+  GK++HG++IR+  D++VF+G+SLIDMY+K   +  
Sbjct: 193 ENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVEL 252

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +   F  +  ++++++ ++I G  Q+G  ++ L  FR M    ++P  ++F +V+ AC++
Sbjct: 253 SVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAH 312

Query: 627 AGLVDEGLQ----IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
              ++ G Q    I  L   + K   S+     + DM  + G +  A     ++      
Sbjct: 313 LTALNLGKQLHAYIIRLGFDDNKFIASS-----LLDMYAKCGNIKMARYIFNKIEMCDRD 367

Query: 683 LEIWGSLLGSCRLHGHS 699
           +  W +++  C +HGH+
Sbjct: 368 MVSWTAIIMGCAMHGHA 384



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 234/525 (44%), Gaps = 63/525 (12%)

Query: 68  PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           P ++ W  II  +  + L   ++  ++ ++  S   S D + + S+L+A    ++  + +
Sbjct: 39  PHSLAWICIIKCYASHGLLRHSLASFNLLR--SFGISPDRHLFPSLLRASTLFKHFNLAQ 96

Query: 128 AVHCHFIRCFSNPSRFVYNSLLNMYSTC---LSSLDAEMVGLKYVEVDYS-KYDLVCKVF 183
           ++H   IR   +   +  N+L+NMYS     LS L             YS K D V K+F
Sbjct: 97  SLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLF 156

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
           D M  R+VV+WNT+++   +   Y EA+   + M +  +RP + +  ++ P  +   +  
Sbjct: 157 DRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVT 216

Query: 244 SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
               ++G  ++ G  +  D+F+ SS I MYA+    + +   F     R+   WN++I G
Sbjct: 217 KGKEIHGYAIRHG--FDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAG 274

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
            VQN    + +  F ++L+ +++    V+F S + A + L  L+LG+QLHAYII+     
Sbjct: 275 CVQNGRFDQGLGFFRRMLK-EKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDD 333

Query: 359 -NFVALPVIVLNA----------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
             F+A  ++ + A                + +RD+VSW  +I     +G   + + L  E
Sbjct: 334 NKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEE 393

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSG 459
           M   G     V   A+L+A S+    D G +    + R      G+E Y  + D+  ++G
Sbjct: 394 MLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAG 453

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML--------EHNVTP 511
            ++ A   F  N   +   + W+ ++A    +  +E A     ++L         H +  
Sbjct: 454 RLEEAYD-FISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMS 512

Query: 512 NVVTIA------------------SVLPACNPMGNIELGKQLHGF 538
           N+ + A                     PAC+    IE+G ++H F
Sbjct: 513 NIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW---IEVGNKVHTF 554



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 158/308 (51%), Gaps = 25/308 (8%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R+LFD +     V WNT+I G   N +  EA+ +  +M K +     D++T SS+L    
Sbjct: 153 RKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRP--DSFTLSSILPIFT 210

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  N+  GK +H + IR   +   F+ +SL++MY+ C              +V+ S    
Sbjct: 211 EHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKC-------------TQVELS---- 253

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
           VC  F  +  R+ ++WN+I++  V+  R+ + +  FR ML+  ++P  +SF +V PA + 
Sbjct: 254 VC-AFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAH 312

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTEV 296
           L        ++  +++LG  + ++ F+ASS + MYA+ G    AR IF+     +R+   
Sbjct: 313 LTALNLGKQLHAYIIRLG--FDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVS 370

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  +I G   + H ++A+ LF ++L +D +    V F++ L+A S    +D G +    +
Sbjct: 371 WTAIIMGCAMHGHALDAVSLFEEML-VDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSM 429

Query: 357 IKNFVALP 364
            ++F   P
Sbjct: 430 QRDFGVAP 437


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 192/558 (34%), Positives = 309/558 (55%), Gaps = 29/558 (5%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D FVAS+   +Y  L   D ARK+FD     +T +WNT++ G   +    EA+E F +++
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
               +  D  T  S L A +++ ++ +G+ +H++  K  +A    VL  +I         
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      + D+V++N +IS +  NG+    + L  E+   G   +S T+ AL+   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S   +  + +  H ++L+ G      + + +  ++ +   +++AR+ F+     ++   +
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMP--EKTMES 381

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WNAMI+GY QNGL E A   F QM++ NV PN +TI+S L AC  +G + LGK LH    
Sbjct: 382 WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIIT 441

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
              L+ NV+V T+LIDMY+K G I+ A  +F  +  KN V++  MI GYG HG    AL 
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           L++ M    + P + TF++VL ACS+ GLV+EG ++F  M  +Y I P  EH  C+ D+L
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLL 561

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G++ EA+E + E  +      +WG+LLG+C +H  S+LA++ ++KL E+D  NS  G
Sbjct: 562 GRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENS--G 619

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
           Y+VLLSN++  +  +     VR+E + R L K  G + I++G   + F + D+ HPQS  
Sbjct: 620 YYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEA 679

Query: 781 IYEMLERLAMEMRNAGNK 798
           IY  LE+L  +M  AG +
Sbjct: 680 IYSYLEKLTAKMIEAGYR 697



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 206/428 (48%), Gaps = 36/428 (8%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNV 232
           S+ D   KVFDT+   + V WNT+++    +    EAV  F RM+    +RP   +  +V
Sbjct: 163 SRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRPDATTLASV 218

Query: 233 FPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
            PA + + D      V+    K G +E+ +   V +  I +Y++ G  + AR +FD   +
Sbjct: 219 LPAAAEVADVTMGRCVHSFAEKCGLAEHEH---VLTGLISLYSKCGDVESARCLFDMMEK 275

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD-LGQ 350
            +   +N +I GY  N     ++ LF +++ L   ++ + + L AL  V      D L Q
Sbjct: 276 PDLVAYNALISGYSVNGMVGSSVNLFTELMTLG--LWPNSSTLVALIPVHSPFGHDLLAQ 333

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            LH +++K+       V  A+                     E+ + SWN MIS + QNG
Sbjct: 334 CLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNG 393

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
           L +  + L  +M K     + +T+++ LSA + L    +GK  H  +    +     + +
Sbjct: 394 LTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMT 453

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LIDMYAK G I  AR+IF   D  +++  +WNAMIAGY  +G   EA   ++ ML+ ++
Sbjct: 454 ALIDMYAKCGSISEARRIFNTMD--NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHL 511

Query: 510 TPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            P   T  SVL AC+  G +E G K     +  Y ++  +   T ++D+  ++G +  A 
Sbjct: 512 LPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAF 571

Query: 569 NVFAKIPE 576
            + ++ P+
Sbjct: 572 ELISEFPK 579



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 222/474 (46%), Gaps = 54/474 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD++  P TV+WNT++ G   +    EA+  +++M         D  T +SVL A 
Sbjct: 168 ARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDGSVRP-DATTLASVLPAA 222

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  ++ +G+ VH    +C       V   L+++YS C              +V+ ++  
Sbjct: 223 AEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKC-------------GDVESAR-- 267

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C +FD M + ++VA+N ++S Y        +V  F  ++ +G+ P++ + V + P  S
Sbjct: 268 --C-LFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHS 324

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
             G    A  ++G ++K G  +  +  V+++   ++  L   + ARK FD   E+  E W
Sbjct: 325 PFGHDLLAQCLHGFVLKSG--FTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN     A+ LF Q+++L+ +  + +T  S LSA +QL  L LG+ LH  I 
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLN-VRPNPITISSTLSACAQLGALSLGKWLHRIIT 441

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   V V+ A+I+                    ++VVSWN MI+ +  +G   E L 
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-----KQTHAYLLRHGIHFEGMESYLI 452
           L  +M     +  S T  ++L A S+    + G       T  Y +  GI      + ++
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEH---CTCMV 558

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           D+  ++G +K A ++  +          W A++     +   + A +A +++ E
Sbjct: 559 DLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFE 612


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 343/644 (53%), Gaps = 32/644 (4%)

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VFD +   +  A+N ++  Y     +  A+  +R MLR  + P+  +F  V  A S
Sbjct: 52  LARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACS 111

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L D ++   ++      G     DLFV+++ I +Y     F  AR +F     R+   W
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLH--TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+ GY  +     AI   + + +   +  +  T +S L  ++Q   L  G  +HAY +
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229

Query: 358 KNFVAL---PVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
           +  +      V++  A+++                    R+ V+W+ +I  FV      E
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289

Query: 395 GLMLVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLI 452
              L  +M  +G   + + +V + L   ++L +  +G Q HA + + GIH +   S  L+
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYAK+GLI  A   F+  +   +D  ++ A+++G  QNG  EEAF+ F++M   N+ P+
Sbjct: 350 SMYAKAGLINEATMFFD--EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           + T+ S++PAC+ +  ++ GK  HG  I   L     +  SLIDMY+K G I+ +  VF 
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           K+P ++ V++ TMI GYG HG+ + A +LF  MK  G  PD +TF+ +++ACS++GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G   FD M  +Y I P  EHY C+ D+L R G + EAY+F++ +  + +V  +WG+LLG+
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV-RVWGALLGA 586

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+H + +L + V++ + ++    +  G  VLLSNI++  G ++   +VR   + +G +K
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGT--GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G SWI++ G ++ F   DQ HP S  IY  L+ + ++++  G
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLG 688



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 289/653 (44%), Gaps = 58/653 (8%)

Query: 13  PPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVI 72
           P   AT      P   S+S  +   K    +  L +    G+  LARQ+FD I  P    
Sbjct: 10  PFSAATAARLHRPPSGSISYEVKDKKQ--WQQELEQHISRGQLALARQVFDRIPAPDARA 67

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           +N +I  +      + AI LY  M +     + + YT+  VLKAC+   +LR G+ +H H
Sbjct: 68  YNALIRAYSWLGPFHAAIDLYRSMLRFR--VAPNKYTFPFVLKACSALVDLRAGRTIHAH 125

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                 +   FV  +L+++Y  C                  +++     VF  M  R+VV
Sbjct: 126 AAAAGLHTDLFVSTALIDLYIRC------------------ARFGPARNVFAKMPMRDVV 167

Query: 193 AWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           AWN +++ Y     Y  A+     M    G+RP+  + V++ P L+  G       ++  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 252 LVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            ++   E   +  +  +A+  MYA+     +A ++F     RN   W+ +IGG+V  +  
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA  LF  +L          +  SAL   + L +L +G QLHA I K+ +   +   N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++                     +D +S+  ++S  VQNG  +E  ++  +MQ      D
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
             T+ +L+ A S+L     GK +H  ++  G+  E  + + LIDMYAK G I  +RQ+F+
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           K  +  RD  +WN MIAGY  +GL +EA   F  M      P+ VT   ++ AC+  G +
Sbjct: 468 KMPA--RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLV 525

Query: 530 ELGKQ-----LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             GK       H + I   ++  +     ++D+ ++ G+++ A      +P K  V    
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581

Query: 585 MILGYGQ-HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +LG  + H   +    + R ++  G E     FV + +  S AG  DE  ++
Sbjct: 582 ALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRFDEAAEV 633



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 15/247 (6%)

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ++ +   G +  ARQ+F++  + D     +NA+I  Y+  G    A   +R ML   V P
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPD--ARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAP 98

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N  T   VL AC+ + ++  G+ +H  +    L  ++FV T+LID+Y +      A NVF
Sbjct: 99  NKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CGIEPDAITFVAVLSACSYAGLV 630
           AK+P ++ V +  M+ GY  HGM   A++    M+   G+ P+A T V++L   +  G +
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGAL 218

Query: 631 DEGLQIFD------LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +G  I        L Q E ++   T     + DM  +  ++V A      +    +V  
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGT----ALLDMYAKCKQLVYACRVFHGMPVRNDV-- 272

Query: 685 IWGSLLG 691
            W +L+G
Sbjct: 273 TWSALIG 279


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 237/810 (29%), Positives = 411/810 (50%), Gaps = 69/810 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+H L          T+ + L  +   C  G P LA+++FD+      + WN ++  +  
Sbjct: 191 QVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAK 250

Query: 83  NNLPYEAILLYSQMK--KSSPYTSCDNYTYSSVLKAC-AETRNLRIGKAVHCHFIRCFSN 139
                    L+  M+   S        +T+ S++ A    + +L +   +    ++   +
Sbjct: 251 RGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCS 310

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +V ++L++ ++             ++  +D +K      ++  ++ RN V  N +++
Sbjct: 311 SDLYVGSALVSAFA-------------RHGMLDEAK-----DIYLGLKERNAVTLNGLIA 352

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL-SSLGDYKSADV-------VYGL 251
             VK +    A   F     MG R S    V+ +  L S++ ++ +A+        V+  
Sbjct: 353 GLVKQQHGEAAAEIF-----MGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAH 407

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           +++ G  Y   + V++  + MYA+ G  D A ++F     R+   WNT+I    QN +  
Sbjct: 408 VLRAGHIY-RKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGY-C 465

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           EA  +   ++  + I   +   +S LS+ + L  L  GQQLH   +K  + L   V NA+
Sbjct: 466 EAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNAL 525

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLD-DEGLMLVYEMQKQGFMID 410
           ++                     DVVSWN+++     +     E + +   M K G + +
Sbjct: 526 VKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPN 585

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
            VT    L+A + L   ++GKQ H+ +L+HG+  +  +++ L+  YAKSG + +  ++F 
Sbjct: 586 KVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFS 645

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           +  SG RD  +WN+MI+GY  NG L+EA      M+      +  T + VL AC  +  +
Sbjct: 646 RM-SGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAAL 704

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E G ++H F +R  L+ +V V ++L+DMYSK G I+YA+ VF  + +KN  ++ +MI GY
Sbjct: 705 ERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGY 764

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            +HG+  +AL +F  M+  G  PD +TFV+VLSACS+AGLV+ GL  F+LM ++Y I P 
Sbjct: 765 ARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGILPR 823

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS---ELAEVVA 706
            EHY CV D+LGR G++ +  E++K +  + N L IW ++L +C+   H    +L    +
Sbjct: 824 IEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTL-IWRTVLVACQQSKHRAKIDLGTEAS 882

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           + LLE++ +N  P  +VL S  +A  G WE+  K R  M+   ++KE G SW+ +   V+
Sbjct: 883 RMLLELEPQN--PVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVH 940

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F + D+ HP + +IYE L  L  ++RNAG
Sbjct: 941 TFIAGDRSHPNTKEIYEKLNFLIQKIRNAG 970



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 169/682 (24%), Positives = 319/682 (46%), Gaps = 64/682 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            R   AR++FD +     V W  +I G V + LP +A  L+  M +  P     ++T+ S
Sbjct: 114 ARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGS 173

Query: 113 VLKACAETRNLRIGKAVHCHFI--RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           VL+AC ++   R+G AV  H +  +     +  V N+L++MY +C        VG     
Sbjct: 174 VLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSC-------SVGPPI-- 224

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML----RMGIRPST 226
                  L  +VFDT   R+++ WN ++S Y K    +     FR M      + +RP+ 
Sbjct: 225 -------LAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTE 277

Query: 227 ISFVNVFPA--LSSLGDYKSADVVYGLLVK-LGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            +F ++  A  LSS     S  ++  L V+ L S   +DL+V S+ +  +A  G  D A+
Sbjct: 278 HTFGSLITATYLSSC----SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAK 333

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            I+    ERN    N +I G V+  H   A E+F+   +   +  D  T++  LSA+++ 
Sbjct: 334 DIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD--TYVVLLSAIAEF 391

Query: 344 ----QELDLGQQLHAYIIK-NFVALPVIVLNAVIE--------------------RDVVS 378
               Q L  G+++HA++++   +   + V N ++                     RD +S
Sbjct: 392 STAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRIS 451

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WNT+I+A  QNG  +  +M    M++      +    + LS+ + L     G+Q H   +
Sbjct: 452 WNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV 511

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY-TQNGLLEE 496
           + G++ +  + + L+ MY + G +    +IF  N     D  +WN+++    +    + E
Sbjct: 512 KWGLYLDTSVSNALVKMYGECGRMSECWEIF--NSMSAHDVVSWNSIMGVMASSQAPITE 569

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
           +   F  M++  + PN VT  + L A  P+  +ELGKQ+H   +++ + ++  V  +L+ 
Sbjct: 570 SVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMS 629

Query: 557 MYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            Y+KSG ++    +F+++   ++++++ +MI GY  +G  + A+     M       D  
Sbjct: 630 CYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHC 689

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF  VL+AC+    ++ G+++     + + ++        + DM  + G++  A +    
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSH-LESDVVVESALVDMYSKCGRIDYASKVFHS 748

Query: 676 LGEEGNVLEIWGSLLGSCRLHG 697
           + ++      W S++     HG
Sbjct: 749 MSQKNEF--SWNSMISGYARHG 768


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 218/692 (31%), Positives = 357/692 (51%), Gaps = 54/692 (7%)

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
            HC+ I+C S    +V N +L+ Y             +K+  + Y+       +FD M +
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSY-------------IKFGFLGYANM-----LFDEMPK 63

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+ V+WNT++S Y    +  +A   F  M R G      SF  +   ++S+  +   + V
Sbjct: 64  RDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV 123

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +GL++K G  Y  +++V SS + MYA+    + A + F    E N+  WN +I G+VQ  
Sbjct: 124 HGLVIKGG--YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVR 181

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
               A  L   +     +  D  TF   L+ +      +L +Q+HA ++K  +   + + 
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITIC 241

Query: 369 NAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           NA+I                      +D++SWN+MI+ F ++ L +    L  +MQ+   
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAK--SGLIKTA 464
             D  T T LLSA S   +Q  GK  H  +++ G+       + LI MY +  +G ++ A
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +FE   S  +D  +WN++I G+ Q GL E+A   F  +    +  +    +++L +C+
Sbjct: 362 LSLFESLKS--KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS-VTYT 583
            +  ++LG+Q+H  + +     N FV +SLI MYSK G+I  A   F +I  K+S V + 
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MILGY QHG+ + +L LF  M    ++ D +TF A+L+ACS+ GL+ EGL++ +LM+  
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE--LGEEGNVLEIWGSLLGSCRLHGHSEL 701
           YKIQP  EHY    D+LGR G V +A E ++   L  +  VL+   + LG CR  G  E+
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLK---TFLGVCRACGEIEM 596

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           A  VA  LLE++  +     +V LS++Y++   WE    V+K M+ERG++K  G SWI++
Sbjct: 597 ATQVANHLLEIEPEDHFT--YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
              V  F ++D+ +P    IY M++ L  EM+
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 261/547 (47%), Gaps = 56/547 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  LFD + +  +V WNT+I G+       +A  L++ MK+S   +  D Y++S +LK  
Sbjct: 54  ANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSG--SDVDGYSFSRLLKGI 111

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  +   +G+ VH   I+     + +V +SL++MY+ C    DA                
Sbjct: 112 ASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA---------------- 155

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF-PAL 236
              + F  +   N V+WN +++ +V+      A   F ++  M ++ +       F P L
Sbjct: 156 --FEAFKEISEPNSVSWNALIAGFVQVRDIKTA---FWLLGLMEMKAAVTMDAGTFAPLL 210

Query: 237 SSLGDYKSADV---VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LER 292
           + L D    ++   V+  ++KLG ++  ++ + ++ I  YA+ G    A+++FD     +
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQH--EITICNAMISSYADCGSVSDAKRVFDGLGGSK 268

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN+MI G+ ++     A ELF+Q ++   +  D  T+   LSA S  +    G+ L
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQ-MQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327

Query: 353 HAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNG 390
           H  +IK  +       NA+I                       +D++SWN++I+ F Q G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMES 449
           L ++ +     ++     +D    +ALL + S+L    +G+Q HA   + G +  E + S
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI MY+K G+I++AR+ F++  S       WNAMI GY Q+GL + +   F QM   NV
Sbjct: 448 SLIVMYSKCGIIESARKCFQQI-SSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             + VT  ++L AC+  G I+ G +L       Y +   +    + +D+  ++G++N A 
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566

Query: 569 NVFAKIP 575
            +   +P
Sbjct: 567 ELIESMP 573


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 212/712 (29%), Positives = 362/712 (50%), Gaps = 46/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D   + ++L+ C+  +N+  G+ VH H        +  V   L+ MY+ C S  +A+   
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQ--- 59

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF+ + R++V AW  ++  Y +   Y  A+  F  M    + P+
Sbjct: 60  ---------------QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 104

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +++V +  A +S    K    ++G +++ G E   D+FV ++ I MY + G    A   
Sbjct: 105 KVTYVAILNACASTESLKDGMEIHGQILQQGFE--GDVFVGTALINMYNKCGSVRGAWDS 162

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   W  MI   VQ++    A  L+ + ++LD +V + +T  +  +A      
Sbjct: 163 FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPNY 221

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNA--------------------VIERDVVSWNTMISA 385
           L  G+ ++  +    +   V V+N+                    +++RDVV+WN +I+ 
Sbjct: 222 LSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITL 281

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +VQN    E + L   +Q+ G   + +T   +L+  ++L +   GK  H  +   G   +
Sbjct: 282 YVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 341

Query: 446 GM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            +  + L+ +Y +      A +IF   D G +D  TW  M   Y QNG  +EA   F++M
Sbjct: 342 AVVATALMSLYGRCEAPGQAWKIFV--DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 399

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
                 P   T+ +VL  C  +  ++ G+Q+H   I       + V T+LI+MY K G +
Sbjct: 400 QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKM 459

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A +VF K+ +++ + + +M+  Y QHG  +  L LF  M+  G++ DA++FV+VLSA 
Sbjct: 460 AEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSAL 519

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++G V +G Q F  M Q++ I P+ E Y CV D+LGR G++ EA + V +L        
Sbjct: 520 SHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGI 579

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +W +LLG+CR H  ++ A+  A+++LE D  +S  G +V+LSN+YA  G+W+ V+++RK 
Sbjct: 580 LWMTLLGACRTHNKTDQAKAAAEQVLERDPSHS--GAYVVLSNVYAAAGDWDGVNRMRKL 637

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           MR RG++KE G S I++   V+ F   D+ HP+ H IY  L+ L  EMR AG
Sbjct: 638 MRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 689



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 175/402 (43%), Gaps = 35/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ +     V WN +I  +V N    EA+ L+ ++++       ++ T+  +L   
Sbjct: 260 ARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDG--VKANDITFVLMLNVY 317

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +L  GK +H        +    V  +L+++Y  C      E  G  +         
Sbjct: 318 TSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRC------EAPGQAW--------- 362

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  M  ++V+ W  +   Y +     EA++ F+ M   G RP++ + V V    +
Sbjct: 363 ---KIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 419

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    ++  +++  + +  ++ V ++ I MY + G    A  +F+   +R+  VW
Sbjct: 420 HLAALQKGRQIHSHIIE--NRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVW 477

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+G Y Q+ +  E ++LF Q ++LD +  D V+F+S LSA+S    +  G Q    ++
Sbjct: 478 NSMLGAYAQHGYYDETLQLFNQ-MQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAML 536

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           ++F   P   L          +  ++    + G   E + +V ++   G + D +    L
Sbjct: 537 QDFSITPTPEL----------YGCVVDLLGRAGRIQEAVDIVLKL--SGCLPDGILWMTL 584

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L A       D  K     +L       G    L ++YA +G
Sbjct: 585 LGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAG 626



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 20/186 (10%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  A ++F  +     + W  + + +  N    EA+ L+ +M+      +  + T  +VL
Sbjct: 358 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT--SATLVAVL 415

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
             CA    L+ G+ +H H I         V  +L+NMY  C    +A             
Sbjct: 416 DTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEA------------- 462

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                  VF+ M +R+++ WN+++  Y +   Y E ++ F  M   G++   +SFV+V  
Sbjct: 463 -----MSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLS 517

Query: 235 ALSSLG 240
           ALS  G
Sbjct: 518 ALSHSG 523


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 245/799 (30%), Positives = 395/799 (49%), Gaps = 77/799 (9%)

Query: 13  PPPTATP--------------PPPQLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHL 57
           PP  ATP              P P+L ++H+L+      + P I ++L S     GRP L
Sbjct: 3   PPQAATPIAVLSRFLSSPSPSPVPELLRVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGL 62

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A   F +  RP   +WN++I    C +    A+  + +M  SS   S   +T      A 
Sbjct: 63  AALAFSACPRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPS--PFTVPLAASAA 120

Query: 118 AETRNLRIGKAVHCHFIR----CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           AE   L +G +VH + +R         S  V +SL+ MY+ C    DA            
Sbjct: 121 AELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDA------------ 168

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG----IRPSTISF 229
                  K+F+ MR R+VVAW  +VS  V+     + +R    M+R+      RP++ + 
Sbjct: 169 ------VKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTM 222

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDN 288
            +   A   L +  S   ++G  VK+G   V D  +  SA+F MY++    + A  +F  
Sbjct: 223 ESGLEACGVLDELNSGRCLHGYAVKVG---VGDSPMVISALFSMYSKCHSTEDACSLFPE 279

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             E++   W ++IG Y       EA+ELF +++E   +  DDV     LS +     +  
Sbjct: 280 LPEKDVVSWTSLIGIYCWRGLIREAMELFQEMME-SGLQPDDVLVSCLLSGLGNSGNVHG 338

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+  HA I+K      V+V NA+I                    +RD  SWN MI  + +
Sbjct: 339 GKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCK 398

Query: 389 NGLDDEGLMLVYEMQKQG---FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            G D + L L  EMQ +    F+ D+ ++ + +S+ S L    +G+  H Y ++H +  +
Sbjct: 399 AGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDED 458

Query: 446 G-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + LI MY + G    A +IF        D  TWN +I+ Y   G    A   + QM
Sbjct: 459 SSVANVLIGMYGRCGKFDHACKIFGLAKL-KGDVVTWNTLISSYAHLGHSNTAVSLYDQM 517

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L   +TPN  T+ +V+ AC  +  +E G+++H +      D +V + T+LIDMY+K G +
Sbjct: 518 LTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQL 577

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F  + + + V +  MI GYG HG +++AL LF  M+G  I+P+ +TF+A+LSAC
Sbjct: 578 GTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSAC 637

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            ++GL++EG Q+F  M + Y ++P+ +HY C+ D+LG+ G + EA + V  +  E +   
Sbjct: 638 CHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDG-G 695

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IWG+LL +C+LH   E+   +AKK    D  N   GY++L+SN Y     W+ ++K+R+ 
Sbjct: 696 IWGTLLSACKLHDDFEMGLRIAKKAFASDAENE--GYYILISNSYGSAKKWDEIEKLREA 753

Query: 745 MRERGLRKEVGCSWIDVGG 763
           M+  G++K  G S +D  G
Sbjct: 754 MKNHGVQKGAGWSAVDYCG 772


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 206/648 (31%), Positives = 334/648 (51%), Gaps = 33/648 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F++M  RN V+W  ++  Y +  +  EA   +  M R G++P  I+F  +        
Sbjct: 98  ELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTT 157

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             K    ++  +++ G  +   L V +S +  Y +  C D A ++F     +++  +N M
Sbjct: 158 TLKEVLQIHSHIIRFG--FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVM 215

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY +     EA++LF+Q+  +D       TF + L      +++  GQQ+H   IK  
Sbjct: 216 ITGYTKYGFREEALKLFMQMRNMD-FQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTS 274

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               + V NA++                    E D VS+N +I+ +  NG  ++   L  
Sbjct: 275 YVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFK 334

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKSG 459
            +Q   F   +     +LS A+   N  +G+QTHA  ++   +    + + L+DMYAK  
Sbjct: 335 RLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCE 394

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
             + A +IF   +   R+   W A+I+ Y Q G  EEA   F++M   NV  +  T AS 
Sbjct: 395 KFEDANRIFA--NLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFAST 452

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L A   + ++ LGKQLH   IR  L  +VF G+ L+DMY+  G +  A  VF ++P++N 
Sbjct: 453 LKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNI 512

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V +  +I  Y Q+G +E   S F  M   G+ PD+++F++VL+ACS+ GLV++ L  F+ 
Sbjct: 513 VCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNS 572

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M Q YK+ P  +HY  + D+L R G+  EA   + E+  E + + +W S+L SCR+H + 
Sbjct: 573 MTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEV-MWSSVLNSCRIHKNQ 631

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +LA+  A +L +MD       Y V +SNIYAE G WEN  KV+K MRERG++K    SW+
Sbjct: 632 DLAKKAADQLFKMDALRDAAAY-VNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWV 690

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK-----TIQN 802
           ++   V+ F + D+ HPQ+ +I   +  L   M   G K     T+QN
Sbjct: 691 EIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQN 738



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 169/595 (28%), Positives = 288/595 (48%), Gaps = 64/595 (10%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+ +   L   +P   T ++   +S   +      AR+LF+S+     V W  +I G+  
Sbjct: 61  QIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQ 120

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           NN P EA  LY++M +S      D+ T++++L    +T  L+    +H H IR   + S 
Sbjct: 121 NNQPKEAFNLYTEMCRSG--VKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASL 178

Query: 143 FVYNSLLNMY--STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSW 200
            V+NSL++ Y  + CL                    D+  ++F  M  ++ V++N +++ 
Sbjct: 179 IVFNSLVDSYCKTCCL--------------------DIASQLFSEMPTKDSVSFNVMITG 218

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           Y K     EA++ F  M  M  +PS  +F  +        D      ++GL +K  + YV
Sbjct: 219 YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIK--TSYV 276

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            D+FVA++ +  Y++    D A+ +FD   E +   +N +I GY  N    ++ +LF + 
Sbjct: 277 WDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKR- 335

Query: 321 LELDEIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----- 373
             L    FD  +  F + LS  +    L +G+Q HA  +       V V NA+++     
Sbjct: 336 --LQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKC 393

Query: 374 ---------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          R+ V W  +IS +VQ G  +E L +  EM ++    D  T  + L
Sbjct: 394 EKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTL 453

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            A++NL +  +GKQ H+ ++R G+    F G  S L+DMYA  G +K A ++F+  +  D
Sbjct: 454 KASANLASVSLGKQLHSSVIRLGLLSSVFSG--SVLVDMYANCGSMKDAIEVFK--EMPD 509

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           R+   WNA+I+ Y+QNG  E  F +F  M+E  + P+ V+  SVL AC+  G +E  K L
Sbjct: 510 RNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVE--KAL 567

Query: 536 HGFSIR---YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
             F+     Y LD       ++ID+  +SG  N A N+ +++P E + V +++++
Sbjct: 568 WYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVL 622



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 205/440 (46%), Gaps = 27/440 (6%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++F++   RN   W  MIGGY QNN P EA  L+ ++     +  D +TF + LS   
Sbjct: 96  ARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCR-SGVKPDHITFATLLSGFD 154

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
               L    Q+H++II+   +  +IV N++++                    +D VS+N 
Sbjct: 155 DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNV 214

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI+ + + G  +E L L  +M+   F     T  A+L  +    +   G+Q H   ++  
Sbjct: 215 MITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTS 274

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
             ++  + + L+D Y+K   I  A+ +F+  +  + D  ++N +I GY  NG  E++F  
Sbjct: 275 YVWDIFVANALLDFYSKHDYIDLAKNLFD--EMPELDGVSYNIIITGYAWNGQYEKSFDL 332

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F+++   +        A++L       N+ +G+Q H  ++       V VG +L+DMY+K
Sbjct: 333 FKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAK 392

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
                 A  +FA +  +NSV +T +I  Y Q G  E AL +F+ M    +  D  TF + 
Sbjct: 393 CEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFAST 452

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L A +    V  G Q+   + +   +  S      + DM    G + +A E  KE+ +  
Sbjct: 453 LKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRN 511

Query: 681 NVLEIWGSLLGSCRLHGHSE 700
            V   W +L+ +   +G +E
Sbjct: 512 IVC--WNALISAYSQNGDAE 529



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/421 (23%), Positives = 183/421 (43%), Gaps = 55/421 (13%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA+ LFD +     V +N II G+  N    ++  L+ +++ +S      N+ ++++L  
Sbjct: 297 LAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTS--FDRKNFPFATMLSV 354

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A   NL +G+  H   +   +     V N+L++MY+ C                   K+
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKC------------------EKF 396

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +   ++F  +  RN V W  I+S YV+   + EA++ F+ M R  +     +F +   A 
Sbjct: 397 EDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKAS 456

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           ++L        ++  +++LG   ++ +F  S  + MYA  G    A ++F    +RN   
Sbjct: 457 ANLASVSLGKQLHSSVIRLG--LLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVC 514

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I  Y QN         F  ++E   +  D V+FLS L+A S               
Sbjct: 515 WNALISAYSQNGDAEATFSSFADMIE-SGLYPDSVSFLSVLTACSH-------------- 559

Query: 357 IKNFVALPVIVLNAV-----IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
            +  V   +   N++     ++     + TMI    ++G  +E   L+ EM    F  D 
Sbjct: 560 -RGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMP---FEPDE 615

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYL-----LRHGIHFEGMESYLIDMYAKSGLIKTARQ 466
           V  +++L++    +NQD+ K+    L     LR    +  M     ++YA++G  + A +
Sbjct: 616 VMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMS----NIYAEAGKWENAAK 671

Query: 467 I 467
           +
Sbjct: 672 V 672



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 541 RYLLDQNVFVGTSLIDM----YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           R L D+  +  TS ++M    Y KS  +  A  +F  +  +N V++T MI GY Q+   +
Sbjct: 66  RQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPK 125

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            A +L+  M   G++PD ITF  +LS       + E LQI
Sbjct: 126 EAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQI 165


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 331/601 (55%), Gaps = 29/601 (4%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M+  GI P+  S   V  A + L D      V+G L+KLG  Y +D F A++ + MYA+ 
Sbjct: 179 MISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLG--YDSDPFSANALLDMYAKS 236

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           GC + A  +F    + +   WN +I G V +     A++L  ++     +     T  SA
Sbjct: 237 GCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSY-RVAPSMFTLSSA 295

Query: 337 LSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDV 376
           L A + +  + LG+QLH+ ++K      +FV + +I              V + +  +DV
Sbjct: 296 LKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDV 355

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           + WN++IS +   G D E + L   M K+G   +  T++ +L + +  +     +Q H  
Sbjct: 356 IVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTI 415

Query: 437 LLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            ++ G  ++G + + L+D Y K  L++ A ++FE   +   D   + +MI  Y+Q GL E
Sbjct: 416 SIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPA--EDLVAYTSMITAYSQYGLGE 473

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           EA   + +M + ++ P+    +S+  AC  +   E GKQ+H   ++  L  +VF G SL+
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           +MY+K G I+ A+ +F +I  +  V+++ MI G  QHG   +AL LF  M   GI P+ I
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHI 593

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T V+VLSAC++AGLV E  + F LM++ + I P+ EHY C+ D+LGRVG++ EA   VKE
Sbjct: 594 TLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKE 653

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +  + +   +WG+LLG+ R+H + EL    A+ LL ++   S  G H+LL+NIYA  G W
Sbjct: 654 MPFQASA-AVWGALLGAARIHKNIELGRHAAEMLLTLEPEKS--GTHILLANIYASTGMW 710

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           +NV KVR+ M+   ++KE G SWI++   V  F   D+ HP+S +IY  L+ L   + +A
Sbjct: 711 DNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSA 770

Query: 796 G 796
           G
Sbjct: 771 G 771



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 283/595 (47%), Gaps = 77/595 (12%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           CQ  R  +AR+L    + P  V W+ +I G+V N    EA+L Y +M         + +T
Sbjct: 95  CQCFR--VARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLG--AKGNEFT 150

Query: 110 YSSVLKACAETRNLRIGKAVH-----CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           +SSVLK C+ TRNL +GK +H        I    +P+ F  +++LN    C + L+ E  
Sbjct: 151 FSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLN---AC-AGLEDENY 206

Query: 165 GLK----YVEVDYSK--------YDLVCK---------VFDTMRRRNVVAWNTIVSWYVK 203
           G+K     +++ Y           D+  K         VF  + + ++V+WN +++  V 
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
            E+   A++    M    + PS  +  +   A +++G  K    ++  L+K+  E   D 
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDME--PDS 324

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           FV    I MY++ G    AR +FD    ++  VWN++I GY    + +EA+ LF  + + 
Sbjct: 325 FVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYK- 383

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
           + + F+  T  + L + +  Q     +Q+H   IK+       V N++++          
Sbjct: 384 EGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLED 443

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                      D+V++ +MI+A+ Q GL +E L +   MQ +    D+   ++L +A +N
Sbjct: 444 AAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACAN 503

Query: 424 LRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           L   + GKQ H ++L+ G+    F G  + L++MYAK G I  A  IF  N+   R   +
Sbjct: 504 LSAYEQGKQIHVHVLKCGLLSDVFAG--NSLVNMYAKCGSIDDASCIF--NEISWRGIVS 559

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           W+AMI G  Q+G   +A   F QML++ + PN +T+ SVL ACN  G +   ++  G   
Sbjct: 560 WSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFG--- 616

Query: 541 RYLLDQNVFVGT-------SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
              L + +F  T        ++D+  + G ++ A  +  ++P + S      +LG
Sbjct: 617 ---LMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLG 668



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 45/353 (12%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           +Y++  CF  ARK+  +  E +   W+ +I GYVQN    EA+  + ++  L     ++ 
Sbjct: 91  LYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGA-KGNEF 149

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
           TF S L   S  + L+LG+Q+H                                      
Sbjct: 150 TFSSVLKGCSLTRNLELGKQIHR------------------------------------- 172

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-Y 450
               + LV EM   G   +  +++ +L+A + L +++ G + H YL++ G   +   +  
Sbjct: 173 ----VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANA 228

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMYAKSG  + A  +F   +    D  +WNA+IAG   +   + A     +M  + V 
Sbjct: 229 LLDMYAKSGCPEAAIAVFY--EIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA 286

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P++ T++S L AC  +G ++LG+QLH   ++  ++ + FVG  LIDMYSK G++  A  V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           F  +P K+ + + ++I GY   G    A+SLF +M   G+E +  T   +L +
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 229/541 (42%), Gaps = 91/541 (16%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G P  A  +F  I +P  V WN +I G V +     A+ L  +M   S   +   +T 
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKM--GSYRVAPSMFTL 292

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS LKACA    +++G+ +H   ++    P  FV   L++MYS C    DA M       
Sbjct: 293 SSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARM------- 345

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                      VFD M  ++V+ WN+I+S Y      +EA+  F  M + G+  +  +  
Sbjct: 346 -----------VFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLS 394

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +  + +        + V+ + +K G +Y  D +VA+S +  Y +    + A K+F+ C 
Sbjct: 395 TILKSTAGSQANGFCEQVHTISIKSGYQY--DGYVANSLLDSYGKCCLLEDAAKVFEVCP 452

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +   + +MI  Y Q     EA+++++++ + D I  D   F S  +A + L   + G+
Sbjct: 453 AEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD-IKPDAFIFSSLFNACANLSAYEQGK 511

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H +++K  +   V   N+++                     R +VSW+ MI    Q+G
Sbjct: 512 QIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHG 571

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
              + L L Y+M K G + + +T+ ++LSA ++                           
Sbjct: 572 HGRKALQLFYQMLKNGILPNHITLVSVLSACNH--------------------------- 604

Query: 451 LIDMYAKSGLIKTARQIF---EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                  +GL+  AR+ F   EK       Q  +  M+    + G L+EA V  ++M   
Sbjct: 605 -------AGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEM--- 654

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGF--------SIRYLLDQNVFVGTSLIDMYS 559
               +     ++L A     NIELG+             S  ++L  N++  T + D  +
Sbjct: 655 PFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVA 714

Query: 560 K 560
           K
Sbjct: 715 K 715



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 45/279 (16%)

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +++Y+K    + AR++    DS + D  +W+A+I+GY QNG  EEA + + +M       
Sbjct: 89  VNLYSKCQCFRVARKLVI--DSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKG 146

Query: 512 NVVTIASVLPACNPMGNIELGKQL------------------------------------ 535
           N  T +SVL  C+   N+ELGKQ+                                    
Sbjct: 147 NEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENY 206

Query: 536 ----HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
               HG+ I+   D + F   +L+DMY+KSG    A  VF +IP+ + V++  +I G   
Sbjct: 207 GMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           H  ++ AL L   M    + P   T  + L AC+  GLV  G Q+   + +   ++P + 
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK-MDMEPDSF 325

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
               + DM  + G + +A   V +L    +V+ +W S++
Sbjct: 326 VGVGLIDMYSKCGLLQDA-RMVFDLMPXKDVI-VWNSII 362


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 190/526 (36%), Positives = 298/526 (56%), Gaps = 27/526 (5%)

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQELDLGQQ 351
           +T  +N ++  ++   HP +A+ LF+++L        D  T   AL + S++  LD+G+ 
Sbjct: 82  STPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRG 141

Query: 352 LHAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
           + AY +K                      VA   +V +A  E  VV WN +++A+++NG 
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
             E + +   M + G   D VT+ ++++A   + +  +GK    ++   G+     + + 
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTA 261

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMYAK G I  AR++F+   S  RD   W+AMI+GYTQ     EA   F +M    V 
Sbjct: 262 LMDMYAKCGEIGKARRLFDGMQS--RDVVAWSAMISGYTQADQCREALGLFSEMQLARVE 319

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           PN VT+ SVL AC  +G +E GK +H +  R  L     +GT+L+D Y+K G I+ A   
Sbjct: 320 PNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEA 379

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +P KNS T+T +I G   +G    AL LF SM+  GIEP  +TF+ VL ACS++ LV
Sbjct: 380 FESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLV 439

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG + FD M ++Y I+P  EHY C+ D+LGR G V EAY+F++ +  E N + IW +LL
Sbjct: 440 EEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV-IWRALL 498

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            SC +H +  + E   K+++ ++  +S  G +VLLSNIYA  G W++   VRKEM++RG+
Sbjct: 499 SSCAVHRNVGIGEEALKQIISLNPSHS--GDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            K  GCS I++ G V  F ++D +HP+  +IY+ +E +   ++ AG
Sbjct: 557 EKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAG 602



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 248/537 (46%), Gaps = 65/537 (12%)

Query: 3   SSSVPLPLPPPPPTATPPPPQ---------LPQIHSLSPPIPKLKTPTIRSRLSKI-CQE 52
           +++VP    P P  A P PP+         LPQ+H+      +L T + +S  S +    
Sbjct: 2   ATAVPTAALPTPGRAGPAPPRAPLRADPSYLPQLHAALIKSGEL-TGSAKSFHSLLEAAA 60

Query: 53  GRPHL---ARQLFDSITRP--TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
             P L   A  LF    RP  +T  +N ++  F+    P +A+ L+ +M  ++     D 
Sbjct: 61  ASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQ 120

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +T +  LK+C+    L +G+ V  + ++      RFV +SL++MY++C     A +V   
Sbjct: 121 HTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLV--- 177

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                          FD      VV WN IV+ Y+K   ++E V  F+ ML +G+    +
Sbjct: 178 ---------------FDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEV 222

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + V+V  A   +GD K    V G + + G     +  + ++ + MYA+ G    AR++FD
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEG--LARNPKLVTALMDMYAKCGEIGKARRLFD 280

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   W+ MI GY Q +   EA+ LF + ++L  +  +DVT +S LSA + L  L+
Sbjct: 281 GMQSRDVVAWSAMISGYTQADQCREALGLFSE-MQLARVEPNDVTMVSVLSACAVLGALE 339

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+ +H+Y+ +  ++L  I+  A+++                    ++  +W  +I    
Sbjct: 340 TGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMA 399

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEG 446
            NG   E L L   M++ G     VT   +L A S+    + G++    + R +GI    
Sbjct: 400 TNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPR- 458

Query: 447 MESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI---AGYTQNGLLEEAF 498
           +E Y  ++D+  ++GL+  A Q F +    + +   W A++   A +   G+ EEA 
Sbjct: 459 VEHYGCMVDLLGRAGLVDEAYQ-FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEAL 514



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 189/400 (47%), Gaps = 34/400 (8%)

Query: 235 ALSSLGDYKSADVVYGL---LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           AL S     + DV  G+    VK G   V D FV SS I MYA  G    AR +FD   E
Sbjct: 126 ALKSCSRMCALDVGRGVQAYAVKRG--LVADRFVLSSLIHMYASCGDVAAARLVFDAAEE 183

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
               +WN ++  Y++N   +E +E+F  +LE+  + FD+VT +S ++A  ++ +  LG+ 
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVG-VAFDEVTLVSVVTACGRIGDAKLGKW 242

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +  ++ +  +A    ++ A+++                    RDVV+W+ MIS + Q   
Sbjct: 243 VAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQ 302

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
             E L L  EMQ      + VT+ ++LSA + L   + GK  H+Y+ R  +     + + 
Sbjct: 303 CREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA 362

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+D YAK G I  A + FE      ++  TW A+I G   NG   EA   F  M E  + 
Sbjct: 363 LVDFYAKCGCIDDAVEAFESMPV--KNSWTWTALIKGMATNGRGREALELFSSMREAGIE 420

Query: 511 PNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           P  VT   VL AC+    +E G++     +  Y +   V     ++D+  ++G+++ A  
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480

Query: 570 VFAKIP-EKNSVTYTTMILGYGQH---GMSERALSLFRSM 605
               +P E N+V +  ++     H   G+ E AL    S+
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISL 520


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 320/570 (56%), Gaps = 30/570 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           +Y  L+  G +Y    F+ +  +   + +G    ARK+FD   + +  +WN ++  Y ++
Sbjct: 94  IYAKLLVTGLQYGG--FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRH 151

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------- 359
                AIE++ + +++  +  D  +F   L A S L  L++G+++H  I ++        
Sbjct: 152 GFFGHAIEMYAR-MQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFV 210

Query: 360 ---FVAL-----PVIVLNAV----IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
               VAL      ++  NAV    ++R +VSW ++IS + QNG   E L +  EM+K   
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNV 270

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             D + + ++L A +++ + + GK  H  +++ G+  E  +   L  +YAK G +  AR 
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
            F  N   +     WNAMI+GY +NG  EEA   FR M   N+ P+ +T+ S + AC  +
Sbjct: 331 FF--NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQI 388

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           G++EL + +  +        +V V TSLID Y+K G ++ A  VF +IP+K+ V ++ M+
Sbjct: 389 GSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMM 448

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
           +GYG HG    ++ LF +M+  G+ P+ +TFV +L+AC  +GLV+EG  +F  M ++Y I
Sbjct: 449 VGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGI 507

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           +P  +HY CV D+LGR G +  AY FV  +  E  V  +WG+LL +C++H H  L E  A
Sbjct: 508 EPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGV-SVWGALLSACKIHRHVTLGEYAA 566

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           ++L  +D  N+  G++V LSN+YA    W+ V KVR  MRE+GL K +G S I++ G + 
Sbjct: 567 ERLFSLDPYNT--GHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQ 624

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F + D+ HP+S +I+E +E L   ++ AG
Sbjct: 625 AFQAGDKTHPRSKEIFEEVEDLERRLKEAG 654



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 220/472 (46%), Gaps = 55/472 (11%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           I   ++K    G    AR+LFD    P   +WN I+  +  +     AI +Y++M+ +  
Sbjct: 110 IAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC- 168

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
             S D +++  VLKAC+    L +G+ VH    R       FV N L+ +Y+ C   + A
Sbjct: 169 -VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                               VF  +  R +V+W +I+S Y +  + +EA+R F  M +  
Sbjct: 228 N------------------AVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTN 269

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +RP  I+ V+V  A + + D +    ++G ++K+G E   DL ++ ++  +YA+ G    
Sbjct: 270 VRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTS--LYAKCGHVMV 327

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR  F+     +   WN MI GYV+N +  EAIELF ++++   I  D +T  S+++A +
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELF-RLMKSKNIRPDSITVTSSIAACA 386

Query: 342 QLQELDLGQQLHAYI-IKNF-------------------VALPVIVLNAVIERDVVSWNT 381
           Q+  L+L + +  YI +  F                   V +   V + + ++DVV W+ 
Sbjct: 387 QIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSA 446

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+  +  +G   E ++L + M++ G   + VT   LL+A  N      G     + L H 
Sbjct: 447 MMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKN-----SGLVEEGWDLFHR 501

Query: 442 IHFEGME------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +   G+E      + ++D+  ++G +  A   F  N   +   + W A+++ 
Sbjct: 502 MRDYGIEPRHQHYACVVDLLGRAGHLDRAYN-FVMNMPIEPGVSVWGALLSA 552


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 231/723 (31%), Positives = 374/723 (51%), Gaps = 61/723 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  ++++  +T  L  GK VH H I+    P  F+ N+LLNMY  C  +  A+       
Sbjct: 62  YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSAD------- 114

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      K+FD M + N+V +N+++S YV+     + +  F    R+G++    + 
Sbjct: 115 -----------KLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTC 163

Query: 230 VNVFPALSSLGDYKSADVVYGLLV--KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
                A S  G+  +  +++GL++   LGS+ V    + +S I MY++ G  D+AR +FD
Sbjct: 164 AGALTACSQSGNLSAGKMIHGLILVYGLGSQVV----LTNSLIDMYSKCGQVDYARILFD 219

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-QLQEL 346
           +  + +   WN++I GYVQN    E + + +Q +  + + F+  T  SAL A S      
Sbjct: 220 HSDKLDGVSWNSLIAGYVQNGKYEELLTI-LQKMHQNGLAFNTYTLGSALKACSSNFNGC 278

Query: 347 DL-GQQLHAYIIKNFVALPVIV--------------------LNAVIERDVVSWNTMISA 385
            + G  LH + IK  + L V+V                     + +++++VV +N M++ 
Sbjct: 279 KMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAG 338

Query: 386 FVQN-GLDDE----GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +Q   ++D+     L L +EM+  G      T ++LL A   + +    KQ HA + ++
Sbjct: 339 LLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN 398

Query: 441 GI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G+   E + S LID+Y+  G +  A   F  N   +       AMI GY QNG  E A  
Sbjct: 399 GLLSDEYIGSILIDLYSVLGSMMDALLCF--NSIHNLTIVPMTAMIXGYLQNGEFESALS 456

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F ++L +   P+    ++++ +C  MG +  G+Q+ G + +  + +      S I MY+
Sbjct: 457 LFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYA 516

Query: 560 KSGVINYAANV-FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           KSG + YAAN+ F ++   + V+++TMI    QHG +  AL  F  MK CGIEP+   F+
Sbjct: 517 KSGDL-YAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFL 575

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            VL ACS+ GLV+EGL+ FD M+++YK++   +H  CV D+LGR G++ +A   +  LG 
Sbjct: 576 GVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGF 635

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           E   + +W +LL +CR+H  +  A+ VA+K++E++   S    +VLL NIY + GN    
Sbjct: 636 EHEPV-MWRALLSACRIHKDTVTAQRVAQKVIELEPLASAS--YVLLYNIYMDAGNKLAA 692

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML-ERLAMEMRNAGN 797
            KVR  M ER ++KE G SWI +G  V  F S D+ H  S +IY  L E LA   R    
Sbjct: 693 SKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSA 752

Query: 798 KTI 800
           K I
Sbjct: 753 KDI 755



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 147/601 (24%), Positives = 271/601 (45%), Gaps = 74/601 (12%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L+  C+ G    A +LFD +++   V +N++I G+V  +   + ++L+ + ++       
Sbjct: 101 LNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLG--LKL 158

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLDAEMV 164
           D YT +  L AC+++ NL  GK +H   I  +   S+ V  NSL++MYS C         
Sbjct: 159 DKYTCAGALTACSQSGNLSAGKMIH-GLILVYGLGSQVVLTNSLIDMYSKC--------- 208

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                +VDY++      +FD   + + V+WN++++ YV+  +Y E +   + M + G+  
Sbjct: 209 ----GQVDYARI-----LFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAF 259

Query: 225 STISFVNVFPALSS--LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           +T +  +   A SS   G      +++   +KLG     D+ V ++ + MYA+ G  D A
Sbjct: 260 NTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL--DVVVGTALLDMYAKTGSLDDA 317

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
            +IFD  +++N  ++N M+ G +Q     +    +A+ LF ++     I     T+ S L
Sbjct: 318 IQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG-IKPSMFTYSSLL 376

Query: 338 SAVSQLQELDLGQQLHAYIIKN-----------FVAL---------PVIVLNAVIERDVV 377
            A   +++    +Q+HA + KN            + L          ++  N++    +V
Sbjct: 377 KACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIV 436

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
               MI  ++QNG  +  L L YE+       D    + ++S+ +N+     G+Q   + 
Sbjct: 437 PMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHA 496

Query: 438 LRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
            + GI  F   ++  I MYAKSG +  A   F++ +  + D  +W+ MI    Q+G   E
Sbjct: 497 TKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME--NPDIVSWSTMICSNAQHGHAME 554

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLI 555
           A   F  M    + PN      VL AC+  G +E G +        Y +  +V     ++
Sbjct: 555 ALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVV 614

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           D+  ++G +  A ++  +             LG+    +  RAL     +  C I  D +
Sbjct: 615 DLLGRAGRLADAESLILR-------------LGFEHEPVMWRAL-----LSACRIHKDTV 656

Query: 616 T 616
           T
Sbjct: 657 T 657


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 223/713 (31%), Positives = 370/713 (51%), Gaps = 83/713 (11%)

Query: 125 IGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           +G+A+H   +     +    V NSLL MYS C     A                   +VF
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAAR------------------RVF 102

Query: 184 DTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           D MR  R++V+W  +     +     EA+     ML  G+RP+  +      A      +
Sbjct: 103 DGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELF 162

Query: 243 KSAD-VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           +S+   V G  +K G  +  D+ V  + I M+A  G    ARK+F+  +ER   VW  MI
Sbjct: 163 RSSGGTVLGFAIKTGF-WGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMI 221

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             YVQ     +A+ELF+ +LE D    D  T  S +SA ++     LGQQLH+ +++  +
Sbjct: 222 TRYVQGGCAGKAVELFLGMLE-DGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGL 280

Query: 362 ALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQ-NGLDDEGLM 397
                V   +++                        +V+SW  +IS +VQ  G ++  + 
Sbjct: 281 VSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVE 340

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYA 456
           L+ EM  +    + +T ++LL A +NL +QD G+Q HA +++  I +   + + L+ MYA
Sbjct: 341 LLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYA 400

Query: 457 KSGLIKTAR----QIFEKN------DSGD--RDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           +SG ++ AR    Q++E+N      D G+  R  A+W++                   Q+
Sbjct: 401 ESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSS-------------------QI 441

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              +V  +  T AS+L A   +G    G+QLH  SI+   + +  +  SL+ MYS+ G +
Sbjct: 442 ESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYL 501

Query: 565 NYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           + A   F ++  + N +++T++I    +HG +ERALSLF  M   G++P+ +T++AVLSA
Sbjct: 502 DDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSA 561

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+ GLV EG + F  MQ+++++ P  EHY C+ D+L R G V EA EF+ E+  + + L
Sbjct: 562 CSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADAL 621

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +W +LLG+CR + + E+ E+ A+ +++++ ++  P  +VLLSN+YA  G W+ V ++R 
Sbjct: 622 -VWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAP--YVLLSNLYAHGGLWDEVARIRS 678

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            MR R L KE G SW+ VG  ++ F + D  HP++ +IY  L  L  E+++ G
Sbjct: 679 LMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIG 731



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/455 (22%), Positives = 190/455 (41%), Gaps = 75/455 (16%)

Query: 26  QIHSLSPPIPKLKTPTIRSRL----SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           Q+HSL   +  +    +   L    +K+  E     AR++F  +     + W  +I G+V
Sbjct: 270 QLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYV 329

Query: 82  -CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNP 140
            C      A+ L  +M   S     ++ TYSS+LKACA   +   G+ +H   ++     
Sbjct: 330 QCGGQENNAVELLCEMLNES--IEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGN 387

Query: 141 SRFVYNSLLNMY--STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
              V N+L++MY  S C+                        K FD +  RN+++ ++ +
Sbjct: 388 VNVVGNALVSMYAESGCMEEAR--------------------KAFDQLYERNLLSTSSDI 427

Query: 199 --------SWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
                   SW  + E              M +  ST +F ++  A +++G       ++ 
Sbjct: 428 GETGRSNASWSSQIE-------------SMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL-ERNTEVWNTMIGGYVQNNH 309
           L +K G E  +D  +++S + MY+  G  D A + FD    + N   W ++I    ++ H
Sbjct: 475 LSIKTGFE--SDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A+ LF  ++ L  +  +DVT+++ LSA S +  +  G++    + K+   +P     
Sbjct: 533 AERALSLFHDMI-LSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIP----- 586

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
                 +  +  M+    ++GL  E L  + EM  +    D++    LL A     N ++
Sbjct: 587 -----RMEHYACMVDLLARSGLVQEALEFINEMPCKA---DALVWKTLLGACRTYENIEI 638

Query: 430 GKQTHAYLLRHGIHFEGMES----YLIDMYAKSGL 460
           G+       RH I  E  +      L ++YA  GL
Sbjct: 639 GE----IAARHVIDLEPQDPAPYVLLSNLYAHGGL 669


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 223/780 (28%), Positives = 394/780 (50%), Gaps = 62/780 (7%)

Query: 7   PLPLPPPPPTATPPPPQLPQIHS---LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFD 63
           P  L     +      Q  QIH+   ++  I +  T    + LS   +    H A +LFD
Sbjct: 50  PFLLSLAKKSNPIILTQCNQIHAQLIITQYISQ--THLANTLLSFYSKSSNFHYAHKLFD 107

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
            +     V W T+I   +      +A  +++ M+ S      +  T++ +L+AC      
Sbjct: 108 KMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERP--NENTFAVLLRACTNRELW 165

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
            +G  +H   +RC     +F  +SL+ MY      L   +                 +VF
Sbjct: 166 SVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDAL-----------------RVF 208

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDY 242
             +  R+VVAWN ++S + +   +    R F  M    G++P  I+F ++    S L + 
Sbjct: 209 YGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEV 268

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                ++G++ K G+E   D+ V S+ + +YA+       RKIFD+  +++  VW++MI 
Sbjct: 269 MQ---IHGIVYKFGAEV--DVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMIS 323

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
           GY  NN   EA+  F  +     +  D     S L A  ++++L+ G Q+H  +IKN   
Sbjct: 324 GYTMNNRGEEAVNFFKDMCR-QRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQ 382

Query: 360 ---FVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLD-DEGLMLVYE 401
              FVA  ++ L A              + ++D+V+WN+MI A  + G      + L  E
Sbjct: 383 NDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQE 442

Query: 402 MQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSG 459
           +++  F+ I   T+ A+L +     +   G+Q H+ +++  +    +  + L+ MY++  
Sbjct: 443 LRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECK 502

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A + F   D   +D ++W+++I    QN +  +A    ++ML+  +     ++   
Sbjct: 503 QIDDAFKAFV--DIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLC 560

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + AC+ +  I  GKQLH F+I+     +V++G+S+IDMY+K G I  +  VF +  + N 
Sbjct: 561 ISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNE 620

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           VT+  +I GY  HG +++A+ +   ++  G+ P+ +TF+A++SACS+AG V+E   +F L
Sbjct: 621 VTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTL 680

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  +YKI+P +EHY C+ D  GR G++ EAY+ V++ G E      W +LL +CR H + 
Sbjct: 681 MLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQKDGSES----AWRTLLSACRNHSNR 736

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           ++ E  A K++E++  +  P  ++LLSNIY EEGNWE     RK+M +  ++K+ G SW+
Sbjct: 737 KIGEKSAMKMIELNPSDHAP--YILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWL 794


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 237/739 (32%), Positives = 375/739 (50%), Gaps = 58/739 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P     +  + +S  C+ G    AR L   +     V WNT+I     +  P EA+ +Y
Sbjct: 71  LPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMY 130

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M +     +  N+T +SVL AC     L  G+  H   ++   +  +FV N LL MY+
Sbjct: 131 QGMLQEGLAPT--NFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYT 188

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C S  DA                   ++FD M   N V++  ++    +     +A+R 
Sbjct: 189 KCGSVADA------------------VRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRL 230

Query: 214 FRMMLRMGIR--PSTISFVNVFPALSSLGDY------KSADVVYGLLVKLGSEYVNDLFV 265
           F  M R GIR  P  +S V    A +  GDY      + A  ++ L+V+ G  + +D  V
Sbjct: 231 FARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG--FGSDQHV 288

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE-LD 324
            +S + +YA+    D A K+F++    +   WN +I GY Q    +   E  ++VLE + 
Sbjct: 289 GNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQ----LGCYERAMEVLEFMQ 344

Query: 325 EIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTM 382
           E  F+  +VT+ + L++  + +++   + +       F  +P        +  V +WNT+
Sbjct: 345 ESGFEPNEVTYSNMLASCIKARDVPSARAM-------FDKIP--------KPSVTTWNTL 389

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S + Q  L  E + L   MQ Q    D  T+  +LS+ S L N ++GKQ H+  +R  +
Sbjct: 390 LSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLL 449

Query: 443 HFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           H +  + S LID+Y+K G +  A  IF  N   +RD   WN+MI+G   + L EEAF   
Sbjct: 450 HNDMFVASGLIDIYSKCGQVGIALIIF--NMMTERDVVCWNSMISGLAIHSLSEEAFDFL 507

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           +QM E+ + P   + AS++  C  + +I  G+Q+H   ++   DQNV+VG SLIDMY+KS
Sbjct: 508 KQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKS 567

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ A   F  +  KN V +  MI GY Q+G  E+A+ LF  M     +PD++TF+AVL
Sbjct: 568 GNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVL 627

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           + CS++GLVDE +  F+ M+  Y I P  EHY C+ D L R  +  E    + ++  + +
Sbjct: 628 TGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDD 687

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + +W  LL +C +H ++EL E  AK L  +D +N  P  +VLLSNIYA  G   +   V
Sbjct: 688 PI-LWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSP--YVLLSNIYATLGRHGDASAV 744

Query: 742 RKEMRERGLRKEVGCSWID 760
           R  M  RG+ K  G SW++
Sbjct: 745 RALMSSRGVVKGRGYSWVN 763



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 52/101 (51%)

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           + R L   NV+   + I    ++G +  A ++  ++P++N+V++ T+I    + G    A
Sbjct: 67  AFRALPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEA 126

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           L +++ M   G+ P   T  +VLSAC     +D+G +   L
Sbjct: 127 LEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGL 167


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 209/716 (29%), Positives = 372/716 (51%), Gaps = 54/716 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNP-------SRFVYNSLLNMYSTCLSSLDAE 162
           Y++++ AC+  R+L  G+ VH H +   S+        +  + N L+ MY  C +     
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAP---- 102

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                         D   +VFD M  RN V+W ++++ +V+  R  +A+  F  MLR G 
Sbjct: 103 --------------DSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGT 148

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
                +  +   A + LGD  +   V+   +K  SE  +DL V ++ + MY++ G  D  
Sbjct: 149 AADQFALGSAVRACTELGDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDG 206

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             +F+   +++   W ++I G+ Q    +EA+++F +++       ++  F SA  A   
Sbjct: 207 FMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGA 266

Query: 343 LQELDLGQQLHAYIIKNFVALPVIV---LNAVIER-----------------DVVSWNTM 382
           +   + G+Q+H   IK  +   + V   L+ +  R                 D+VSWN++
Sbjct: 267 VGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSI 326

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++A+   GL  E L+L  EM+  G   D +TV  LL A         G+  H+YL++ G+
Sbjct: 327 VNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGL 386

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + + L+ MYA+   + +A  +F  ++  D+D  TWN+++    Q+   EE    F
Sbjct: 387 DGDVSVCNSLLSMYARCSDLSSAMDVF--HEIKDQDVVTWNSILTACAQHNHPEEVLKLF 444

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
             + +   + + +++ +VL A   +G  E+ KQ+H ++ +  L  +  +  +LID Y+K 
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKC 504

Query: 562 GVINYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           G ++ A  +F  +     V +++++I+GY Q G ++ AL LF  M+  GI P+ +TF+ V
Sbjct: 505 GSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGV 564

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L+ACS  G V+EG   + +M+ EY I P+ EH  C+ D+L R GK+ EA  F+ ++  E 
Sbjct: 565 LTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEP 624

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +++ +W +LL + ++H   E+ +  A+ +L +D  +S    +VLL NIYA  GNW    +
Sbjct: 625 DII-MWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAA--YVLLCNIYAASGNWNEFAR 681

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++K MR  G++K  G SW+ + G +  F  +D+ HP+S +IY MLE + MEM  AG
Sbjct: 682 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAG 737



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 163/615 (26%), Positives = 291/615 (47%), Gaps = 65/615 (10%)

Query: 22  PQLPQIH------SLSPPIPKLKTPTIRSRLSKICQEGR---PHLARQLFDSITRPTTVI 72
           PQ  ++H      S S P  +L   T+      I   GR   P  ARQ+FD +     V 
Sbjct: 61  PQGRRVHRHLVASSSSSPDAQLAGNTVLGN-HLITMYGRCAAPDSARQVFDEMPARNPVS 119

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           W ++I   V N    +A+ L+S M +S   T+ D +   S ++AC E  ++  G+ VH H
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSG--TAADQFALGSAVRACTELGDVGTGRQVHAH 177

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            ++        V N+L+ MYS      D  M                  +F+ ++ ++++
Sbjct: 178 ALKSERGSDLIVQNALVTMYSKNGLVDDGFM------------------LFERIKDKDLI 219

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPALSSLGDYKSADVVYGL 251
           +W +I++ + +    +EA++ FR M+  G   P+   F + F A  ++G ++  + ++GL
Sbjct: 220 SWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 279

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +K   +   DL+V  S   MYA     D AR  F      +   WN+++  Y       
Sbjct: 280 SIKYRLD--RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS 337

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           EA+ LF ++ +   +  D +T    L A      L  G+ +H+Y++K  +   V V N++
Sbjct: 338 EALVLFSEMRD-SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSL 396

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +                    ++DVV+WN++++A  Q+   +E L L   + K    +D 
Sbjct: 397 LSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDR 456

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEK 470
           +++  +LSA++ L   ++ KQ HAY  + G+  + M S  LID YAK G +  A ++FE 
Sbjct: 457 ISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEI 516

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             + +RD  +W+++I GY Q G  +EA   F +M    + PN VT   VL AC+ +G + 
Sbjct: 517 MGN-NRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVN 575

Query: 531 LGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
            G   + +SI    Y +       + ++D+ +++G +  AAN   ++P E + + + T++
Sbjct: 576 EG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633

Query: 587 LGYGQHG---MSERA 598
                H    M +RA
Sbjct: 634 AASKMHNDMEMGKRA 648


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 343/644 (53%), Gaps = 32/644 (4%)

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  +VFD +   +  A+N ++  Y     +  A+  +R MLR  + P+  +F  V  A S
Sbjct: 52  LARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACS 111

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L D ++   ++      G     DLFV+++ I +Y     F  AR +F     R+   W
Sbjct: 112 ALVDLRAGRTIHAHAAAAGLH--TDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAW 169

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+ GY  +     AI   + + +   +  +  T +S L  ++Q   L  G  +HAY +
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229

Query: 358 KNFVAL---PVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
           +  +      V++  A+++                    R+ V+W+ +I  FV      E
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTE 289

Query: 395 GLMLVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLI 452
              L  +M  +G   + + +V + L   ++L +  +G Q HA + + GIH +   S  L+
Sbjct: 290 AFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLL 349

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MYAK+GLI  A   F+  +   +D  ++ A+++G  QNG  EEAF+ F++M   N+ P+
Sbjct: 350 SMYAKAGLINEATMFFD--EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           + T+ S++PAC+ +  ++ GK  HG  I   L     +  SLIDMY+K G I+ +  VF 
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           K+P ++ V++ TMI GYG HG+ + A +LF  MK  G  PD +TF+ +++ACS++GLV E
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTE 527

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G   FD M  +Y I P  EHY C+ D+L R G + EAY+F++ +  + +V  +WG+LLG+
Sbjct: 528 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV-RVWGALLGA 586

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+H + +L + V++ + ++    +  G  VLLSNI++  G ++   +VR   + +G +K
Sbjct: 587 CRIHKNIDLGKQVSRIIQKLGPEGT--GNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G SWI++ G ++ F   DQ HP S  IY  L+ + ++++  G
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLG 688



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 289/653 (44%), Gaps = 58/653 (8%)

Query: 13  PPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVI 72
           P   AT      P   S+S  +   K    +  L +    G+  LARQ+FD I  P    
Sbjct: 10  PFSAATAARLHRPPSGSISYEVKDKKQ--WQQELEQHISRGQLALARQVFDRIPAPDARA 67

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           +N +I  +      + AI LY  M +     + + YT+  VLKAC+   +LR G+ +H H
Sbjct: 68  YNALIRAYSWLGPFHAAIDLYRSMLRFR--VAPNKYTFPFVLKACSALVDLRAGRTIHAH 125

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                 +   FV  +L+++Y  C                  +++     VF  M  R+VV
Sbjct: 126 AAAAGLHTDLFVSTALIDLYIRC------------------ARFGPARNVFAKMPMRDVV 167

Query: 193 AWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           AWN +++ Y     Y  A+     M    G+RP+  + V++ P L+  G       ++  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 252 LVKLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            ++   E   +  +  +A+  MYA+     +A ++F     RN   W+ +IGG+V  +  
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA  LF  +L          +  SAL   + L +L +G QLHA I K+ +   +   N+
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++                     +D +S+  ++S  VQNG  +E  ++  +MQ      D
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
             T+ +L+ A S+L     GK +H  ++  G+  E  + + LIDMYAK G I  +RQ+F+
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           K  +  RD  +WN MIAGY  +GL +EA   F  M      P+ VT   ++ AC+  G +
Sbjct: 468 KMPA--RDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLV 525

Query: 530 ELGKQ-----LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             GK       H + I   ++  +     ++D+ ++ G+++ A      +P K  V    
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYI----CMVDLLARGGLLDEAYQFIQSMPLKADVRVWG 581

Query: 585 MILGYGQ-HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +LG  + H   +    + R ++  G E     FV + +  S AG  DE  ++
Sbjct: 582 ALLGACRIHKNIDLGKQVSRIIQKLGPEGTG-NFVLLSNIFSAAGRFDEAAEV 633



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 15/247 (6%)

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ++ +   G +  ARQ+F++  + D     +NA+I  Y+  G    A   +R ML   V P
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPD--ARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAP 98

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N  T   VL AC+ + ++  G+ +H  +    L  ++FV T+LID+Y +      A NVF
Sbjct: 99  NKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVF 158

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CGIEPDAITFVAVLSACSYAGLV 630
           AK+P ++ V +  M+ GY  HGM   A++    M+   G+ P+A T V++L   +  G +
Sbjct: 159 AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGAL 218

Query: 631 DEGLQIFD------LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
            +G  I        L Q E ++   T     + DM  +  ++V A      +    +V  
Sbjct: 219 FQGTSIHAYCLRACLEQNEEQVLIGT----ALLDMYAKCKQLVYACRVFHGMPVRNDV-- 272

Query: 685 IWGSLLG 691
            W +L+G
Sbjct: 273 TWSALIG 279


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 209/640 (32%), Positives = 338/640 (52%), Gaps = 36/640 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD M +R+ V+WNT++S Y    +   +   F  M R G      SF  +   ++S  
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            +   + V+GL+VK G  Y  +++V SS + MYA+    + A   F   LE N+  WN +
Sbjct: 62  RFDLGEQVHGLVVKGG--YECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNAL 119

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I G+VQ      A  L   +     +  DD TF   L+ +      +L +Q+HA ++K  
Sbjct: 120 IAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLG 179

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
           +   + + NA+I                      +D++SWN+MI+   ++   +    L 
Sbjct: 180 LEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELF 239

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAK- 457
            EM +     D  T T ++SA S   +Q  GK  H  +++ G+     + + LI MY + 
Sbjct: 240 TEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQF 299

Query: 458 -SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            +G++K A  +FE      +D  +WN+++ G++QNGL E+A   FR +   N+  +    
Sbjct: 300 PTGVMKDALSLFESLKP--KDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAF 357

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ++VL +C+ +  ++LG+Q H  + +   + N FV +SLI MYSK GVI  A   F +I  
Sbjct: 358 SAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISS 417

Query: 577 K-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           K N++ +  MILGY QHG  + +L LF  M    ++ D +TF A+L+ACS+ GL+ EGL+
Sbjct: 418 KHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLE 477

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE--LGEEGNVLEIWGSLLGSC 693
           + + M+  YKIQP  EHY    D+LGR G V +  E ++   L  +  VL+   + LG C
Sbjct: 478 LLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLK---TFLGVC 534

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R  G  E+A  VA  LLE++  +     +V LS++Y++   WE    V+K M+ERG++K 
Sbjct: 535 RACGEIEMATQVANHLLEIEPEDHFA--YVSLSHMYSDLKKWEEKANVKKMMKERGVKKV 592

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            G SWI++   VN F ++D+ H  S +IY M+E L  EM+
Sbjct: 593 PGWSWIEIRNQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQ 632



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 258/547 (47%), Gaps = 60/547 (10%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LFD + +  +V WNT+I G+        +  L++ MK+   Y   D Y++S +LK  A 
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYV--DGYSFSRLLKGIAS 59

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
            +   +G+ VH   ++     + +V +SL++MY+ C    DA    ++ +E         
Sbjct: 60  AKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILE--------- 110

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF-PALSS 238
                     N V+WN +++ +V+      A   F ++  M ++ +       F P L+ 
Sbjct: 111 ---------PNSVSWNALIAGFVQVRDTKTA---FWLLGLMEMKAAVTMDDGTFAPLLTL 158

Query: 239 LGDYKSADV---VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERNT 294
           L D    ++   V+  ++KLG E+  ++ + ++ I  YA  G    A+++FD     ++ 
Sbjct: 159 LDDPMFCNLLKQVHAKVLKLGLEH--EITICNAMISSYANCGLVSDAKRVFDGLGGSKDL 216

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN+MI G  ++     A ELF + +  + I  D  T+   +SA S  +    G+ LH 
Sbjct: 217 ISWNSMIAGLSKHEQKESAFELFTE-MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHG 275

Query: 355 YIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMISAFVQNGLD 392
            +IK  +     V NA+I                       +D+VSWN++++ F QNGL 
Sbjct: 276 LVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLS 335

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---S 449
           ++ +     ++     +D    +A+L + S+L    +G+QTHA   +    FE  E   S
Sbjct: 336 EDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSS--FESNEFVTS 393

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI MY+K G+I+ AR+ FE+  S   +   WNAMI GY Q+G  + +   F QM   NV
Sbjct: 394 SLILMYSKCGVIENARKCFEQ-ISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNV 452

Query: 510 TPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             + VT  ++L AC+  G I+ G + L+     Y +   +    + +D+  ++G++N   
Sbjct: 453 KLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVK 512

Query: 569 NVFAKIP 575
            +   +P
Sbjct: 513 ELIESMP 519



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 21/184 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  LF+S+     V WN+I+ GF  N L  +A+  +  ++ S+     D+Y +S+VL++C
Sbjct: 307 ALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSN--IEVDDYAFSAVLRSC 364

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L++G+  H    +     + FV +SL+ MYS C    +A                
Sbjct: 365 SDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENAR--------------- 409

Query: 178 LVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              K F+ +  + N +AWN ++  Y +      ++  F  M    ++   ++F  +  A 
Sbjct: 410 ---KCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 466

Query: 237 SSLG 240
           S  G
Sbjct: 467 SHTG 470


>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g08490-like [Brachypodium
           distachyon]
          Length = 929

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 230/785 (29%), Positives = 391/785 (49%), Gaps = 96/785 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYSSVLKA 116
           AR +FD ++ P TV WN +I G        +   L+  M       S     T + V+  
Sbjct: 140 ARLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPV 199

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA+ R LR G ++H + ++          N+L+++Y+ C  S                  
Sbjct: 200 CAKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGS---------------GTM 244

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D   + F ++  ++VV+WN+I++ + +   + EA+  F  M      P+  +  N+ P  
Sbjct: 245 DDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVC 304

Query: 237 SSL--GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           S +  G Y   + V+G + ++G  YV D+ V ++ +  Y+++     A  IF +   R+ 
Sbjct: 305 SFMEHGKYYGKE-VHGFVFRVG-LYV-DISVCNALMTHYSKVYEMRAAESIFRSMNTRDI 361

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WNT+I GY+ N +    ++LF ++L    +  D V+ +S L+A +Q+ +   G  +H 
Sbjct: 362 ITWNTIISGYLMNGYHSRVLDLFHRLLSTG-MTPDSVSLISLLTACAQVGDAKGGMGVHG 420

Query: 355 YIIKNFVALPVI-----VLNA--------------------VIERDVVSWNTMISAFVQN 389
           YI ++    PV+     ++N+                    ++ +D +SWN ++SA  + 
Sbjct: 421 YIFRH----PVLHQETSLMNSLVSFYSQCNRFDDALHAFADILSKDSISWNAILSACAKR 476

Query: 390 GLD-DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGM 447
           G   +E   L  EM  +    DSVT+  ++  ++   +  + ++ H Y LR G I    +
Sbjct: 477 GKHIEEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSV 536

Query: 448 ESYLIDMYAKSGLIKTARQIFE------------------KNDS-----------GDRDQ 478
            + ++D YAK G  + A  +F                   KN S             +DQ
Sbjct: 537 ANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQ 596

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            TWN MI  Y QNG+ ++AF  FRQ+      P+ ++I ++L AC  +  ++L +Q HG+
Sbjct: 597 TTWNLMIQVYAQNGMCDQAFSLFRQLQ----CPDTISITNILLACIHLSLVQLVRQCHGY 652

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            +R  L +++ +  SL+D YSK G I  A N+F   P K+ VT+T MI GY  HGM+E A
Sbjct: 653 MLRASL-EDIHLEGSLLDAYSKCGNITDAYNLFQVSPTKDLVTFTAMIGGYAMHGMAEEA 711

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           + LF  M   GI PD +   A+LSACS+AGLVD G++IF  +++ Y+I+P+ EHY C+ D
Sbjct: 712 VELFSEMLTLGIGPDHVVLTALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVD 771

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +L R G++ +AY F  ++         WGSL+G+C++HG   + ++ A +L  M+  +  
Sbjct: 772 LLSRGGRLQDAYNFALDMPPHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGD-- 829

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G +V +SNIYA    W+ V+ VRK M+ + ++K  GCS          F + D +H   
Sbjct: 830 IGNYVTVSNIYAAGEEWDGVEHVRKLMKSKDMKKPAGCS-------XGTFIASDVKHQDR 882

Query: 779 HKIYE 783
             I++
Sbjct: 883 SSIHD 887



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 168/710 (23%), Positives = 309/710 (43%), Gaps = 106/710 (14%)

Query: 106 DNYTYSSVLKACAETRNLR-IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           D    ++ +K+ +  R+   +G+ +H   +R        V  ++++MY  C +  DA +V
Sbjct: 84  DRLALAAAIKSASALRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADARLV 143

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR- 223
                             FD M   + V WN +++   +   + +    FR M+  G   
Sbjct: 144 ------------------FDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADE 185

Query: 224 --PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG---C 278
             P+ ++   V P  + L   ++   ++G +VK G E  +D    ++ I +YA+ G    
Sbjct: 186 SMPTAVTVAVVIPVCAKLRVLRAGMSIHGYVVKTGLE--SDTLCGNALISLYAKCGGSGT 243

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D A + F +   ++   WN++I G+ +N    EA+ LF Q+   D+ + +  T  + L 
Sbjct: 244 MDDAHRAFSSIGCKDVVSWNSIIAGHSENGLFKEALALFGQMTS-DKCLPNYSTVANILP 302

Query: 339 AVSQLQELDL-GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVV 377
             S ++     G+++H ++ +  + + + V NA++                     RD++
Sbjct: 303 VCSFMEHGKYYGKEVHGFVFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDII 362

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           +WNT+IS ++ NG     L L + +   G   DSV++ +LL+A + + +   G   H Y+
Sbjct: 363 TWNTIISGYLMNGYHSRVLDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYI 422

Query: 438 LRHGI-HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-L 494
            RH + H E  + + L+  Y++      A   F   D   +D  +WNA+++   + G  +
Sbjct: 423 FRHPVLHQETSLMNSLVSFYSQCNRFDDALHAFA--DILSKDSISWNAILSACAKRGKHI 480

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EE F  F +M       + VTI +V+   N  G+ ++ ++ HG+S+R        V  ++
Sbjct: 481 EEFFKLFNEMCHEVTRWDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAI 540

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG-------------------------- 588
           +D Y+K G    A  +F  +  +N VTY TMI                            
Sbjct: 541 LDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWN 600

Query: 589 -----YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
                Y Q+GM ++A SLFR ++ C   PD I+   +L AC +  LV    Q        
Sbjct: 601 LMIQVYAQNGMCDQAFSLFRQLQ-C---PDTISITNILLACIHLSLVQLVRQC-----HG 651

Query: 644 YKIQPSTEHY---CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           Y ++ S E       + D   + G + +AY   +        L  + +++G   +HG   
Sbjct: 652 YMLRASLEDIHLEGSLLDAYSKCGNITDAYNLFQV--SPTKDLVTFTAMIGGYAMHG--- 706

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD---KVRKEMRE 747
           +AE   +   EM T    P  HV+L+ + +   +   VD   K+ K +RE
Sbjct: 707 MAEEAVELFSEMLTLGIGPD-HVVLTALLSACSHAGLVDAGIKIFKSVRE 755



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 44/228 (19%)

Query: 38  KTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK 97
           +T    + L    + G P  A  LF ++     V +NT+I  ++ N+   EA ++++QM 
Sbjct: 533 ETSVANAILDAYAKCGYPQDADVLFRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMS 592

Query: 98  KSSPYT------------------------SC-DNYTYSSVLKACAETRNLRIGKAVHCH 132
           K    T                         C D  + +++L AC     +++ +  H +
Sbjct: 593 KKDQTTWNLMIQVYAQNGMCDQAFSLFRQLQCPDTISITNILLACIHLSLVQLVRQCHGY 652

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            +R  S     +  SLL+ YS C +  DA              Y+L    F     +++V
Sbjct: 653 MLRA-SLEDIHLEGSLLDAYSKCGNITDA--------------YNL----FQVSPTKDLV 693

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            +  ++  Y       EAV  F  ML +GI P  +    +  A S  G
Sbjct: 694 TFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVLTALLSACSHAG 741


>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 220/725 (30%), Positives = 365/725 (50%), Gaps = 108/725 (14%)

Query: 110  YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            ++ +L+ C+++    + + +H   I   S+ S F+   ++++Y+      DA+ V     
Sbjct: 875  FNDLLQQCSKSH---LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRV----- 926

Query: 170  EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
               +    + C         N++ WN+I+   V      EA+  +  M ++G+     +F
Sbjct: 927  ---FEVSPIEC-------FSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 976

Query: 230  VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
              V  A + +G  K    V+G +V++G ++  +L V +  + MY ++G  D ARK+F+  
Sbjct: 977  PLVIRACALMGSRKLCRSVHGHVVEMGFQW--NLHVGNELMGMYGKIGRMDDARKVFERM 1034

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              R+   WNTM+ GY  N     A E+F                                
Sbjct: 1035 AVRSCVSWNTMVSGYALNYDCHGASEMFR------------------------------- 1063

Query: 350  QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                            ++ +A +E ++V+W +++S+  + G   E + L   M+ +G   
Sbjct: 1064 ----------------MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGA 1107

Query: 410  DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIF 468
             +  +  +LS + +L   D GK  H Y+++ G  ++  +++ LI +Y K G +  AR +F
Sbjct: 1108 TAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILF 1167

Query: 469  ----EKN------------DSGDRDQA---------------------TWNAMIAGYTQN 491
                 KN            D G  D+A                     +W+A+I G+   
Sbjct: 1168 LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASK 1227

Query: 492  GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
            G  EEA   FR+M    V  N VTIASVL  C  +  + LG+++HG  +R L+D N+ VG
Sbjct: 1228 GQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVG 1287

Query: 552  TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
              LI+MY+KSG       VF KI  K+ +++ TM+ GYG HG+ E A+  F  M   G E
Sbjct: 1288 NGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFE 1347

Query: 612  PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
            PD +TFVAVLSACS+AGLV EG ++FD M +E++++P  EHY C+ D+LGR G + EA +
Sbjct: 1348 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASK 1407

Query: 672  FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
             VK +  E N   +WG+LL SCR+H ++E+AE  A ++  +++   + G ++LLSNIYA 
Sbjct: 1408 VVKSMPVEPNAC-VWGALLNSCRMHKNTEVAEETASQIFNLNSE--IAGSYMLLSNIYAA 1464

Query: 732  EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
             G WE+  KVR   + +GL+K  G SWI V   V  F++ + +H +  ++Y +L+ L ++
Sbjct: 1465 SGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQ 1524

Query: 792  MRNAG 796
            M   G
Sbjct: 1525 MEVEG 1529



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 217/511 (42%), Gaps = 120/511 (23%)

Query: 71   VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
            ++WN+I+   V +    EA+ +Y +M+K     S D +T+  V++ACA   + ++ ++VH
Sbjct: 939  LLWNSILRANVAHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLCRSVH 996

Query: 131  CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
             H +      +  V N L+ MY                      + D   KVF+ M  R+
Sbjct: 997  GHVVEMGFQWNLHVGNELMGMYG------------------KIGRMDDARKVFERMAVRS 1038

Query: 191  VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD--------- 241
             V+WNT+VS Y        A   FRMM   G+ P+ +++ ++  + +  G          
Sbjct: 1039 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 1098

Query: 242  --------------------------YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                                      +    V++G +VK G E  N LFV +S I +Y +
Sbjct: 1099 RMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE--NYLFVKNSLICLYGK 1156

Query: 276  LGCFDFARKIFDNCLERNTEVWNTM----------------------------------- 300
             G  + AR +F     +N   WN +                                   
Sbjct: 1157 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 1216

Query: 301  ----IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
                IGG+       EA+ELF + ++L ++  + VT  S LS  ++L  L LG+++H ++
Sbjct: 1217 WSAVIGGFASKGQGEEALELF-RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 1275

Query: 357  IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
            +++ +   ++V N +I                     +D++SWNTM++ +  +GL +  +
Sbjct: 1276 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 1335

Query: 397  MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
                +M K GF  D VT  A+LSA S+      G++    +++       ME Y  ++D+
Sbjct: 1336 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 1395

Query: 455  YAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
              ++GL++ A ++  K+   + +   W A++
Sbjct: 1396 LGRAGLLQEASKVV-KSMPVEPNACVWGALL 1425



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 26/280 (9%)

Query: 65   ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
            + RP  V W+ +I GF       EA+ L+ +M+ +      ++ T +SVL  CAE   L 
Sbjct: 1209 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK--VKANSVTIASVLSVCAELAALH 1266

Query: 125  IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
            +G+ +H H +R   + +  V N L+NMY+   S  +  +                  VF+
Sbjct: 1267 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL------------------VFE 1308

Query: 185  TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
             +  +++++WNT+V+ Y        A+R F  M++ G  P  ++FV V  A S  G    
Sbjct: 1309 KIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAE 1368

Query: 245  ADVVYGLLVKLGSEYVNDLFVASSA--IFMYAELGCFDFARKIFDNC-LERNTEVWNTMI 301
               ++  ++K   E+  +  +   A  + +    G    A K+  +  +E N  VW  ++
Sbjct: 1369 GRELFDKMIK---EFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 1425

Query: 302  GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
                 + +   A E   Q+  L+  +      LS + A S
Sbjct: 1426 NSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAAS 1465


>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 218/703 (31%), Positives = 374/703 (53%), Gaps = 47/703 (6%)

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
           +T  D+ T   VL +CA  R+LR+G  +H + ++   + + FV NSL++MY+ C    DA
Sbjct: 37  HTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDA 96

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                              K+FD M  + VV+W +++S + +   + E +  F  ML   
Sbjct: 97  A------------------KLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET- 137

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++P+  +   +  A +   D K   +++  ++K G  +V D F+ +S I  Y + G    
Sbjct: 138 LQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTG--FVMDAFLQNSLIDGYTKSGTLVA 195

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+    + R+   W ++I G V N    +A+  F ++ E D +  + VT LS L A S
Sbjct: 196 AEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQE-DGVSPNTVTILSILQACS 254

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV-- 399
            + E  + Q +H  ++K      V V+N+++E            +  NG   EG  +   
Sbjct: 255 LINEWQVFQWVHGLVMKAEWRENVFVMNSLVE-----------MYSINGYFKEGFQIFCN 303

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKS 458
           +  +  G  + + T+  LL   S+ +   +G+Q H Y ++HG      +E+ LI MYA++
Sbjct: 304 FCFEGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAEN 363

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN----VTPNVV 514
                A Q+F K     RD  +WN MI+   +     +A +   ++  +     + P+ V
Sbjct: 364 ERDDAAFQLFRKMSC--RDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFV 421

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           TI + + AC+ + +++LG+ +HG+  R  L  ++FV  SL+DMY K G ++ A  V  ++
Sbjct: 422 TILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEM 481

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE-PDAITFVAVLSACSYAGLVDEG 633
           P ++  ++ ++I  YG +G    AL++F+ +K  G   P+AITF  +LSAC++AGLV EG
Sbjct: 482 PVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEG 541

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            +IF  M++EY ++P  EH+ C+ D+LGR G++ EA  F++++  E    E+WG+LLG C
Sbjct: 542 FEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGP-EVWGALLGGC 600

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE-RGLRK 752
            L G+ ++AE VAKKL  ++ ++    + V LSN+YA    WE+  KVR EMR    L+K
Sbjct: 601 GLFGNLDIAERVAKKLYILEPKSR--AWRVALSNVYASVNKWEDAAKVRAEMRRSEELQK 658

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           E G S ++V G   RF   D  HP++  +Y +L+ +   +R+A
Sbjct: 659 EGGWSSVEVRGQEFRFMVGDTMHPEARMVYAVLKGINEHIRDA 701



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 169/652 (25%), Positives = 293/652 (44%), Gaps = 116/652 (17%)

Query: 1   MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLK------------------TPTI 42
           ++SSSV  P P   P    P  + P IH+LS  +  ++                  T  +
Sbjct: 10  ISSSSVHRPAPAKQPRLAEPRDKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNIL 69

Query: 43  RSRLSK-----------ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL 91
           +S L               + GR   A +LFD +   T V W +++ G        E I 
Sbjct: 70  KSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVIS 129

Query: 92  LYSQMKKS-SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
           ++ +M ++  P    + YT + +L+ACA+ R+L++ + +HCH I+       F+ NSL++
Sbjct: 130 IFWRMLETLQP----NEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLID 185

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            Y+   + + AE +  +          L+C        R+VV+W +++S  V      +A
Sbjct: 186 GYTKSGTLVAAEKLMKR----------LIC--------RDVVSWTSVISGCVLNGMVEKA 227

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  F  M   G+ P+T++ +++  A S + +++    V+GL++K  +E+  ++FV +S +
Sbjct: 228 LLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMK--AEWRENVFVMNSLV 285

Query: 271 FMYAELGCFDFARKIFDN-CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
            MY+  G F    +IF N C E +        G Y+                        
Sbjct: 286 EMYSINGYFKEGFQIFCNFCFEGD--------GQYLSTE--------------------- 316

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------- 373
             T  + L   S  + L LG+Q+H Y IK+      IV N++I                 
Sbjct: 317 --TIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFR 374

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF--MI--DSVTVTALLSAASNLR 425
               RD+VSWNTMIS+ V+     + LML+ E+   G   MI  D VT+ A + A S+L 
Sbjct: 375 KMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLA 434

Query: 426 NQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           +  +G+  H Y+ R G+  +  +++ L+DMY K G +  A ++ E+     RD  +WN++
Sbjct: 435 SLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPV--RDLGSWNSL 492

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNV-TPNVVTIASVLPACNPMGNIELGKQLHGFSIR-Y 542
           IA Y  NG    A   F+Q+       PN +T  ++L AC   G +  G ++     R Y
Sbjct: 493 IAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREY 552

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG 593
            L+  +     ++D+  ++G +  A     K+P E     +  ++ G G  G
Sbjct: 553 SLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFG 604


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/559 (36%), Positives = 307/559 (54%), Gaps = 33/559 (5%)

Query: 262 DLFVASS--AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           D F AS   A     E G   +AR +F       +   N++I G    N   EA+ LF Q
Sbjct: 19  DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEAL-LFYQ 77

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
            + +  ++ D  TF S   +     E   G+Q+H +  K   A      N ++       
Sbjct: 78  EMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCG 134

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTVTALL 418
                        ++ VVSW TMI    Q    +E + L   M K +    + VT+  +L
Sbjct: 135 CLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVL 194

Query: 419 SAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           +A +  R+  + K+ H Y+  HG      + + L+D+Y K G ++ AR +F+K  + +++
Sbjct: 195 TACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDK--AQEKN 252

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +WN MI G+ ++   EEA + FR+M    +  + VT+AS+L AC  +G +ELGK LH 
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHA 312

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
           +  +  +D +V +GT+L+DMY+K G I  A  VF ++PEK+ +T+T +ILG    G +E 
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAEN 372

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           AL  F  M   G++PDAITFV VL+ACS+AG VDEG+  F+ M   Y IQP+ EHY  + 
Sbjct: 373 ALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLV 432

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G++ EA E +K +    +   + G LLG+CR+HG+ E AE  AK+LLE+D  +S
Sbjct: 433 DILGRAGRIAEAEELIKSMPMAPDQF-VLGGLLGACRIHGNLEAAERAAKQLLEIDPYHS 491

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             G +VLLSNIY     WE   + R+ M ERG+RK  GCS I+V G V+ F   D  H Q
Sbjct: 492 --GTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQ 549

Query: 778 SHKIYEMLERLAMEMRNAG 796
           S +I EMLE +  +++NAG
Sbjct: 550 SSEINEMLEDMISKLKNAG 568



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 233/527 (44%), Gaps = 87/527 (16%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKIC---QEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QIH+          P   S++   C   + G    AR +F  I  PT+   N+II G
Sbjct: 3   QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRG 62

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
               NL  EA+L Y +M         D YT+ S+ K+C   RN   GK +HCH  +    
Sbjct: 63  CTDKNLHQEALLFYQEMMVQGLIP--DRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFA 117

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +  N+L+NMYS C   + A                   KVFD M  + VV+W T++ 
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSAR------------------KVFDKMEDKTVVSWATMIG 159

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            + + ++  EAVR F RMM    ++P+ ++ VNV  A +   D          +VK   E
Sbjct: 160 VHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLA--------MVKRIHE 211

Query: 259 YVNDLFVASSAIF------MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           Y+++       +       +Y + GC   AR +FD   E+N   WN MI G+V++++  E
Sbjct: 212 YIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEE 271

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+ LF + ++   I  D VT  S L A + L  L+LG+ LHAYI K  + + V +  A++
Sbjct: 272 ALLLFRE-MQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALV 330

Query: 373 --------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                               E+DV++W  +I      G  +  L    EM  +G   D++
Sbjct: 331 DMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAI 390

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGM----------ESY--LIDMYAKSG 459
           T   +L+A S           HA  +  GI HF  M          E Y  L+D+  ++G
Sbjct: 391 TFVGVLAACS-----------HAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAG 439

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            I  A ++  K+     DQ     ++     +G LE A  A +Q+LE
Sbjct: 440 RIAEAEELI-KSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLE 485



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 208/404 (51%), Gaps = 31/404 (7%)

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N+I+        + EA+  ++ M+  G+ P   +F ++F +  +  + K    ++    K
Sbjct: 57  NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQ---IHCHSTK 113

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           LG  + +D +  ++ + MY+  GC   ARK+FD   ++    W TMIG + Q + P EA+
Sbjct: 114 LG--FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAV 171

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-- 372
            LF ++++ + +  ++VT ++ L+A ++ ++L + +++H YI ++     V VLN V+  
Sbjct: 172 RLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHV-VLNTVLMD 230

Query: 373 -------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                              E+++ SWN MI+  V++   +E L+L  EMQ +G   D VT
Sbjct: 231 VYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVT 290

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKND 472
           + +LL A ++L   ++GK  HAY+ +  I  +  + + L+DMYAK G I+TA Q+F  ++
Sbjct: 291 MASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF--HE 348

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             ++D  TW A+I G    G  E A   F +M    V P+ +T   VL AC+  G ++ G
Sbjct: 349 MPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG 408

Query: 533 -KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
               +  S  Y +   +     L+D+  ++G I  A  +   +P
Sbjct: 409 ISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 195/558 (34%), Positives = 310/558 (55%), Gaps = 29/558 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A+  I MY++L   + AR +      RN   W ++I G  QN H   A+  F + +  
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRR 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV---------------- 367
           + +V +D TF  A  AV+ L+    G+Q+HA  +K    L V V                
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 368 ----LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                + + ER++ +WN  IS  V +G   E +    E ++     +S+T  A L+A S+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
             + ++G Q H  +LR G   +  + + LID Y K   I+++  IF   + G ++  +W 
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF--TEMGTKNAVSWC 279

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++A Y QN   E+A V + +  +  V  +   I+SVL AC  M  +ELG+ +H  +++ 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            +++ +FVG++L+DMY K G I  +   F ++PEKN VT  ++I GY   G  + AL+LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399

Query: 603 RSM--KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
             M  +GCG  P+ +TFV++LSACS AG V+ G++IFD M+  Y I+P  EHY C+ DML
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G V  AYEF+K++  +  +  +WG+L  +CR+HG  +L  + A+ L ++D ++S  G
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTI-SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS--G 516

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            HVLLSN +A  G W   + VR+E++  G++K  G SWI V   V+ F +KD+ H  + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 576

Query: 781 IYEMLERLAMEMRNAGNK 798
           I   L +L  EM  AG K
Sbjct: 577 IQTTLAKLRNEMEAAGYK 594



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 243/497 (48%), Gaps = 54/497 (10%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +LK      ++R+G+ VH   ++   S P  F+ N L+NMYS       A +V L+    
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV-LRLTPA 70

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                            RNVV+W +++S   +   +  A+ +F  M R G+ P+  +F  
Sbjct: 71  -----------------RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPC 113

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
            F A++SL    +   ++ L VK G   + D+FV  SA  MY +    D ARK+FD   E
Sbjct: 114 AFKAVASLRLPVTGKQIHALAVKCGR--ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 171

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN E WN  I   V +  P EAIE F++   +D    + +TF + L+A S    L+LG Q
Sbjct: 172 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQ 230

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           LH  ++++     V V N +I+                    ++ VSW ++++A+VQN  
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGME 448
           D++  +L    +K         ++++LSA + +   ++G+  HA+ ++  +    F G  
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG-- 348

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L+DMY K G I+ + Q F+  +  +++  T N++I GY   G ++ A   F +M    
Sbjct: 349 SALVDMYGKCGCIEDSEQAFD--EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406

Query: 509 V--TPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVI 564
              TPN +T  S+L AC+  G +E G ++   S+R  Y ++      + ++DM  ++G++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMV 465

Query: 565 NYAANVFAKIPEKNSVT 581
             A     K+P + +++
Sbjct: 466 ERAYEFIKKMPIQPTIS 482



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 197/465 (42%), Gaps = 53/465 (11%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAI 90
           SPP P L    I +  SK+     P  AR +         V W ++I G   N     A+
Sbjct: 38  SPPPPFLANYLI-NMYSKL---DHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTAL 93

Query: 91  LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
           + + +M++       +++T+    KA A  R    GK +H   ++C      FV  S  +
Sbjct: 94  VEFFEMRREGVVP--NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           MY       DA                   K+FD +  RN+  WN  +S  V   R  EA
Sbjct: 152 MYCKTRLRDDAR------------------KLFDEIPERNLETWNAFISNSVTDGRPREA 193

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +  F    R+   P++I+F     A S          ++GL+++ G  +  D+ V +  I
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG--FDTDVSVCNGLI 251

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
             Y +      +  IF     +N   W +++  YVQN+   +A  L+++  + D +   D
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVETSD 310

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------ 372
               S LSA + +  L+LG+ +HA+ +K  V   + V +A++                  
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF--MIDSVTVTALLSAASNLRNQD 428
             E+++V+ N++I  +   G  D  L L  EM  +G     + +T  +LLSA S     +
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430

Query: 429 VGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
            G +    +   +GI   G E Y  ++DM  ++G+++ A +  +K
Sbjct: 431 NGMKIFDSMRSTYGIE-PGAEHYSCIVDMLGRAGMVERAYEFIKK 474



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 24/334 (7%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIR-SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P    QIH+L+    ++    +  S     C+      AR+LFD I       WN  I  
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
            V +  P EAI  + + ++   +   ++ T+ + L AC++  +L +G  +H   +R   +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
               V N L++ Y  C     +E+                  +F  M  +N V+W ++V+
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEI------------------IFTEMGTKNAVSWCSLVA 283

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            YV+     +A   +    +  +  S     +V  A + +   +    ++   VK   E 
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
              +FV S+ + MY + GC + + + FD   E+N    N++IGGY        A+ LF +
Sbjct: 344 T--IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401

Query: 320 VLELD-EIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +         + +TF+S LSA S+   ++ G ++
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 210/710 (29%), Positives = 364/710 (51%), Gaps = 57/710 (8%)

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLDAEMVGLKYVEV 171
           C+  R+   G+ VH H +   +  +    N++L+     MY  C +   A MV       
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMV------- 102

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                      FD M  RN V+W  +++ + +  R  +A+  F  MLR+G  P   +  +
Sbjct: 103 -----------FDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGS 151

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A + LGD      V+   +K  S+    L V ++ + MY++ G       +F+   +
Sbjct: 152 AVRACAELGDLGLGRQVHAQAIK--SDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRD 209

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ-LQELDLGQ 350
           ++   W ++I G  Q    ++A+ +F +++       ++  F S   A S  +  L+ G+
Sbjct: 210 KDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGE 269

Query: 351 QLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           Q+H   +K                    N +   + V   +   D+VSWN++I+AF  +G
Sbjct: 270 QIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADG 329

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-S 449
           L  E ++L  EM+      D +TV ALL A         G+  H+YL++ G+  + M  +
Sbjct: 330 LLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCN 389

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI MY +     +A  +F  +++ DRD  TWN+++    Q+  +E+ F  FR  L H+ 
Sbjct: 390 SLISMYTRCLDFPSAMDVF--HETNDRDVVTWNSILTACVQHRHMEDVFKLFR--LLHSS 445

Query: 510 TPNV--VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            P++  +++ +VL A   +G  E+ KQ+H ++ +  L  +  +  +LID Y+K G ++ A
Sbjct: 446 MPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDA 505

Query: 568 ANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
             +F  +     V +++++I+GY Q G ++ AL LF  M+  G++P+ +TFV VL ACS 
Sbjct: 506 NKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSR 565

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
            GLVDEG   + +M+ EY I P+ EH  CV D+L R G++ EA +FV ++  E +++ +W
Sbjct: 566 VGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDII-MW 624

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LL + R H   E+ +  A+ +L +D  +S    +VLL NIYA  GNW    +++K+MR
Sbjct: 625 NTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAA--YVLLCNIYASSGNWNEFARLKKDMR 682

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G++K  G SWI + G +  F  +D+ HP+S ++Y ML+ +  EM  AG
Sbjct: 683 SSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAG 732



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/574 (26%), Positives = 277/574 (48%), Gaps = 56/574 (9%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR +FD +     V W  +I     N+   +A+ L+S M +    T+ D +   S +
Sbjct: 96  PDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLG--TAPDEFALGSAV 153

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           +ACAE  +L +G+ VH   I+  +     V N+L+ MYS   S      VG  +      
Sbjct: 154 RACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGS------VGDGFA----- 202

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVF 233
                  +F+ +R +++ +W +I++   +  R ++A+  FR M+  G+  P+   F +VF
Sbjct: 203 -------LFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVF 255

Query: 234 PALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            A S  +   +  + ++GL VK   +   + +   S   MYA     D A K+F      
Sbjct: 256 RACSVVINSLEYGEQIHGLCVKYKLD--RNSYAGCSLGDMYARCNKLDSAMKVFYRIESP 313

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN++I  +  +    EA+ LF + +    +  D +T ++ L A      L  G+ +
Sbjct: 314 DLVSWNSLINAFSADGLLSEAMVLFSE-MRYSSLKPDGITVMALLCACVGCDALRQGRSI 372

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H+Y++K  +   V+V N++I                    +RDVV+WN++++A VQ+   
Sbjct: 373 HSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHM 432

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           ++   L   +      +D +++  +LSA++ L   ++ KQ HAY  + G+  +  + + L
Sbjct: 433 EDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNAL 492

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ID YAK G +  A ++FE   +G RD  +W+++I GY Q G  +EA   F +M    V P
Sbjct: 493 IDTYAKCGSLDDANKLFEIMGTG-RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKP 551

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           N VT   VL AC+ +G ++ G   + +SI    Y +       + +ID+ +++G ++ AA
Sbjct: 552 NHVTFVGVLIACSRVGLVDEG--CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAA 609

Query: 569 NVFAKIP-EKNSVTYTTMILGYGQHG---MSERA 598
               ++P E + + + T++     H    M +RA
Sbjct: 610 KFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRA 643


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 219/724 (30%), Positives = 369/724 (50%), Gaps = 45/724 (6%)

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M ++ P       +++  ++        R G+A+H   ++  S+    V NSL+  YS+ 
Sbjct: 1   MARAPPLAFTGQVSHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSS- 59

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
              L        + ++  +              R+V +WN++++  +   R + A+  FR
Sbjct: 60  FPRLFLPAAFAVFADIPAAA-------------RDVASWNSLLN-PLSHHRPLAALSHFR 105

Query: 216 MMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
            ML    I PS  SF   F A +      +  VV+ L  KL S   N +FV+++ + MY 
Sbjct: 106 SMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSN-VFVSTALLNMYC 164

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           +LG    A+ +FD    RN   W  M+ GY       EA ELF Q+L    +  ++    
Sbjct: 165 KLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVAT 224

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
           + LSA+S    L +G Q+H  ++K+ +   V V N+++                    ER
Sbjct: 225 AVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKER 284

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           + ++W+ MI+ + QNG  +  + +  +M   GF     T+  +L+A S++     GKQ H
Sbjct: 285 NSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAH 344

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
             +++ G   +  ++S L+DMYAK G I  A++ F  N   + D   W AM+ G+ QNG 
Sbjct: 345 GLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECF--NQFSELDIVLWTAMVTGHVQNGE 402

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            E+A + + +M +  V PN +TI S+L AC  +  +E GKQLH   +++       VG++
Sbjct: 403 FEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSA 462

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L  MYSK G +     VF ++P ++ + + ++I G+ Q+G    A++LF  MK  G  PD
Sbjct: 463 LSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPD 522

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +TF+ VL ACS+ GLVD G   F  M ++Y + P  +HY C+ D+L R G + EA +F+
Sbjct: 523 PVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFI 582

Query: 674 KELG-EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           + +  + G  L  W  +LG+CR     ++     +KL+++ T +S    ++LLSNIYA +
Sbjct: 583 ESITIDHGTCL--WRIVLGACRSLRDFDVGAYAGEKLMDLGTGDS--AAYILLSNIYAAQ 638

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
             W +V++VR  M+  G+ K+ GCSW+++   V+ F   +Q+HP +  I   L RL   M
Sbjct: 639 RKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAEIINTELRRLGKHM 698

Query: 793 RNAG 796
           ++ G
Sbjct: 699 KDEG 702



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 213/467 (45%), Gaps = 46/467 (9%)

Query: 27  IHSLSPPIPKLKTPTIRSR--LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           +H+L+  +P   +    S   L+  C+ G    A+ +FD +     V W  ++ G+    
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EA  L+ QM    P    + +  ++VL A +    L +G  VH   ++        V
Sbjct: 199 CSQEAFELFRQMLGECPLHK-NEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSV 257

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            NSL+ MY+     +DA                    VF++ + RN + W+ +++ Y + 
Sbjct: 258 ENSLVTMYAKA-GCMDAAF-----------------HVFESSKERNSITWSAMITGYSQN 299

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
                AVR F  M   G  P+  + V V  A S +G        +GL+VKLG E    ++
Sbjct: 300 GNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEV--QVY 357

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V S+ + MYA+ GC   A++ F+   E +  +W  M+ G+VQN    +A+ L+ + ++ +
Sbjct: 358 VKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYAR-MDKE 416

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL--------------------P 364
            +  + +T  S L A + L  L+ G+QLH  I+K    L                     
Sbjct: 417 GVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDG 476

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
           ++V   +  RDV++WN++IS F QNG  ++ + L  EM+ +G   D VT   +L A S++
Sbjct: 477 MVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHM 536

Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
              D G      +++       ++ Y  ++D+ +++G++  A+   E
Sbjct: 537 GLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIE 583


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/624 (33%), Positives = 328/624 (52%), Gaps = 111/624 (17%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT--------------- 299
           L +++  ++F+ +  I +Y +  C D ARK+FD   +RNT  WN+               
Sbjct: 42  LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAA 101

Query: 300 ----------------MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                           M+ G+ Q++   E++E FV+ +  ++ + ++ +F SALSA + L
Sbjct: 102 RLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK-MHREDFLLNEYSFGSALSACAGL 160

Query: 344 QELDLGQQLHAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMI 383
            +L++G Q+HA + K+                     VA    V + +IER++V+WN++I
Sbjct: 161 MDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + QNG   E L +   M   G   D VT+ +++SA ++L     G Q HA +++    
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280

Query: 444 FEGM--ESYLIDMYAKSGLIKTARQIFEK-----------------------------ND 472
            + +   + L+DMYAK   +  AR++F++                             + 
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSK 340

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              R+  +WNA+IAGYTQNG  EEA   FR +   ++ P   T           GN    
Sbjct: 341 MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF----------GN---- 386

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
                     LL  ++FVG SLIDMY K G I   + VF K+ E++ V++  +I+GY Q+
Sbjct: 387 ----------LLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN 436

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G    AL +FR M  CG +PD +T + VL ACS+AGLV+EG   F  M +E+ + P  +H
Sbjct: 437 GYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDH 495

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+LGR G + EA   ++ +    + + +WGSLL +C++HG+ E+ +  A+KLLE+
Sbjct: 496 YTCMVDLLGRAGCLNEAKNLIEAMPVNPDAV-VWGSLLAACKVHGNIEMGKHAAEKLLEI 554

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           D  NS P  +VLLSN+YAE G W +V +VRK MR++G+ K+ GCSWI+V   V+ F  KD
Sbjct: 555 DPWNSGP--YVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKD 612

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
           + HP   +IY +L+ L  +M+  G
Sbjct: 613 KSHPHRKQIYSVLKMLTEQMKRVG 636



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 160/642 (24%), Positives = 280/642 (43%), Gaps = 144/642 (22%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV----- 164
           ++ +L +C  +R+ R  + VH   +    +   F+ N L+++Y  C    DA  +     
Sbjct: 18  FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77

Query: 165 --------GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                    L  V       D   ++F +M   +  +WN++VS + + +R+ E++  F  
Sbjct: 78  QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M R     +  SF +   A + L D      V+ L+ K  S Y  D+++ S+ I MY++ 
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK--SRYSTDVYMGSALIDMYSKC 195

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    A ++F   +ERN   WN++I  Y QN    EA+E+FV++++   +  D+VT  S 
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD-SGLEPDEVTLASV 254

Query: 337 LSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVI----------------------- 372
           +SA + L  L  G Q+HA ++K N     +++ NA++                       
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 373 ----------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                       +R+VVSWN +I+ + QNG ++E L L   +++
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
           +       T         NL   D+              F G  + LIDMY K G I+  
Sbjct: 375 ESIWPTHYTF-------GNLLKSDI--------------FVG--NSLIDMYMKCGSIEDG 411

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
            ++FEK    +RD  +WNA+I GY QNG   EA   FR+ML     P+ VT+  VL AC+
Sbjct: 412 SRVFEKMK--ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACS 469

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSGVINYAANVFAKIPEKNS 579
             G +E G+  H F   + ++++  +      T ++D+  ++G +N A N+   +P    
Sbjct: 470 HAGLVEEGR--HYF---FSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP---- 520

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
                                         + PDA+ + ++L+AC   G ++ G      
Sbjct: 521 ------------------------------VNPDAVVWGSLLAACKVHGNIEMGKHA--- 547

Query: 640 MQQEYKIQP-STEHYCCVADM---LGRVGKVVEAYEFVKELG 677
            ++  +I P ++  Y  +++M   LGR G VV   + +++ G
Sbjct: 548 AEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQG 589



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 229/516 (44%), Gaps = 61/516 (11%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L     L   +P+  T T  S +S + + G    A +LF S+  P    WN+++ GF  +
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           +   E++  + +M +       + Y++ S L ACA   +L +G  VH    +   +   +
Sbjct: 126 DRFEESLEYFVKMHREDFLL--NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVY 183

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
           + ++L++MYS C S   AE                  +VF  M  RN+V WN++++ Y +
Sbjct: 184 MGSALIDMYSKCGSVACAE------------------EVFSGMIERNLVTWNSLITCYEQ 225

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
                EA+  F  M+  G+ P  ++  +V  A +SL   K    ++  +VK  +++ +DL
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT-NKFRDDL 284

Query: 264 FVASSAIFMYAELGCFDFARKIFD-------------------------------NCLER 292
            + ++ + MYA+    + AR++FD                                  +R
Sbjct: 285 VLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQR 344

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN +I GY QN    EA+ LF ++L+ + I     TF + L +     ++ +G  L
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLLKS-----DIFVGNSL 398

Query: 353 -HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
              Y+    +     V   + ERD VSWN +I  + QNG   E L +  +M   G   D 
Sbjct: 399 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 458

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEK 470
           VT+  +L A S+    + G+     +  HG I  +   + ++D+  ++G +  A+ + E 
Sbjct: 459 VTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEA 518

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
               + D   W +++A    +G +E    A  ++LE
Sbjct: 519 MPV-NPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE 553



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 95/235 (40%), Gaps = 43/235 (18%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY------------ 558
           PN    A +L +C    +    + +H   +       +F+   LID+Y            
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 559 -------------------SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
                              +KSG ++ AA +F  +PE +  ++ +M+ G+ QH   E +L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVD--EGLQIFDLMQQEYKIQPSTEHYCCVA 657
             F  M       +  +F + LSAC  AGL+D   G Q+  L+    K + ST+ Y   A
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGTQVHALVS---KSRYSTDVYMGSA 187

Query: 658 --DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG-HSELAEVVAKKL 709
             DM  + G V  A E    + E    L  W SL+     +G  SE  EV  + +
Sbjct: 188 LIDMYSKCGSVACAEEVFSGMIERN--LVTWNSLITCYEQNGPASEALEVFVRMM 240


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 188/542 (34%), Positives = 317/542 (58%), Gaps = 28/542 (5%)

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
           +G   +ARK+FD   E +  +WN +I GY  +N   +AIE++ + ++   +  D  T   
Sbjct: 116 IGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSR-MQASGVNPDGFTLPC 174

Query: 336 ALSAVSQLQELDLGQQLHAYIIK-----------NFVALPV---------IVLNAVIERD 375
            L A S +  L++G+++H  I +             VAL           IV   + +R+
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           +VSW +MIS + QNGL  E L +  +M+++    D + + ++L A +++ + + GK  H 
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            +++ G+ FE  +   L  MYAK G +  AR  F++ +    +   WNAMI+GY +NG  
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEI--PNVMMWNAMISGYAKNGYT 352

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            EA   F++M+  N+  + +T+ S + AC  +G+++L K +  +  +     +VFV T+L
Sbjct: 353 NEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTAL 412

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           IDM++K G ++ A  VF +  +K+ V ++ MI+GYG HG  + A+ LF +MK  G+ P+ 
Sbjct: 413 IDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPND 472

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           +TFV +L+AC+++GLV+EG ++F  M+  Y I+   +HY CV D+LGR G + EAY+F+ 
Sbjct: 473 VTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFIT 531

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
            +  E  V  +WG+LLG+C+++ H  L E  A++L  +D  N+  G++V LSN+YA    
Sbjct: 532 TMPIEPGV-SVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNT--GHYVQLSNLYASSRL 588

Query: 735 WENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           W++V KVR  MRE+GL K++G S I++ G +  F   D+ HP+  +I+E LE L   ++ 
Sbjct: 589 WDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKE 648

Query: 795 AG 796
           AG
Sbjct: 649 AG 650



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 211/438 (48%), Gaps = 54/438 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR++FD    P+  +WN II G+  +N   +AI +YS+M+ S    + D +T   
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASG--VNPDGFTLPC 174

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC+    L +GK VH    R       FV N L+ +Y+ C     A +V        
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIV-------- 226

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                     F+ +  RN+V+W +++S Y +    +EA+R F  M +  ++P  I+ V+V
Sbjct: 227 ----------FEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSV 276

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + + D +    ++G +VK+G E+  DL ++ +A  MYA+ G    AR  FD     
Sbjct: 277 LRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTA--MYAKCGQVMVARSFFDQMEIP 334

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +WN MI GY +N +  EA+ LF +++    I  D +T  SA+ A +Q+  LDL + +
Sbjct: 335 NVMMWNAMISGYAKNGYTNEAVGLFQEMIS-KNIRTDSITVRSAILACAQVGSLDLAKWM 393

Query: 353 HAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
             YI K       FV   +I              V +  +++DVV W+ MI  +  +G  
Sbjct: 394 GDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRG 453

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
            + + L Y M++ G   + VT   LL+A ++      G     + L H + + G+E+   
Sbjct: 454 QDAIDLFYAMKQAGVCPNDVTFVGLLTACNH-----SGLVEEGWELFHSMKYYGIEARHQ 508

Query: 451 ----LIDMYAKSGLIKTA 464
               ++D+  +SG +  A
Sbjct: 509 HYACVVDLLGRSGHLNEA 526



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 16/202 (7%)

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           Q+H   +   L ++ F+ T  ++     G I YA  VF + PE +   +  +I GY  H 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL----QIFDL-MQQEYKIQP 648
               A+ ++  M+  G+ PD  T   VL ACS   +++ G     QIF L  + +  +Q 
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
                  +  +  + G+V +A   V E  ++ N++  W S++     +G + L     + 
Sbjct: 209 G------LVALYAKCGRVEQA-RIVFEGLDDRNIVS-WTSMISG---YGQNGLPMEALRI 257

Query: 709 LLEMDTRNSMPGYHVLLSNIYA 730
             +M  RN  P +  L+S + A
Sbjct: 258 FGQMRQRNVKPDWIALVSVLRA 279


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 187/568 (32%), Positives = 329/568 (57%), Gaps = 29/568 (5%)

Query: 261 NDLFVASSAIFM-YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           N LF +    F+  +  G  ++ARK+F      +  + NTMI GY ++ +P EA+ L+  
Sbjct: 42  NPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYF 101

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
           ++E   +  D+ T+   L+A ++L  + LG++ H  ++KN     + V+NA+I+      
Sbjct: 102 MVERG-VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTVTALL 418
                         RDVV+WN MI+A +  GL ++   L+ EM K      D VT+ +L+
Sbjct: 161 SFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLV 220

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
            A + L N + GK  H+Y    G+     + + ++DMY K   I++A+++F  N   ++D
Sbjct: 221 PACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVF--NRIREKD 278

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +W +M++G  ++G  +EA   F++M  + +  + +T+  VL AC   G ++ GK +H 
Sbjct: 279 VLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHL 338

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
              ++ ++ ++ + T+L+DMY+K G I+ A  VF ++  +N  T+  +I G   HG  E 
Sbjct: 339 LIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGED 398

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           A+SLF  M+   + PD +TF+A+L ACS+AGLVDEGL +F  M+ +++I+P  EHY CV 
Sbjct: 399 AISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVV 458

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+L R  KV +A  F++ +  + N + +W +LLG+CR  GH +LAE + ++++E++  + 
Sbjct: 459 DLLCRARKVDDALAFIENMPIKANSV-LWATLLGACRSGGHFDLAEKIGRRVIELEPDSC 517

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             G +V+LSN+YA    W++  K+RK+M+ +G+ K  GCSWI++ G +++F + D+ H Q
Sbjct: 518 --GRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQ 575

Query: 778 SHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           + +IY M+E +   +   G      +NV
Sbjct: 576 TEQIYAMIEEMTRRVNLDGGHVPGTANV 603



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 232/488 (47%), Gaps = 32/488 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+F  M+  +    NT++  Y +++   EAV  +  M+  G+     ++  V  A + LG
Sbjct: 66  KLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLG 125

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             K     +  ++K G  + +DLFV ++ I  Y   G F  A  +FD    R+   WN M
Sbjct: 126 AVKLGRRFHCEVLKNG--FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIM 183

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY----- 355
           I  ++      +A +L  ++ +LD +  D+VT +S + A +QL  L+ G+ LH+Y     
Sbjct: 184 INAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELG 243

Query: 356 ----------IIKNFVALPVI-----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                     I+  +     I     V N + E+DV+SW +M+S   ++G   E L L  
Sbjct: 244 LDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQ 303

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +MQ     +D +T+  +LSA +     D GK  H  + +  I+ +  +E+ L+DMYAK G
Sbjct: 304 KMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCG 363

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A Q+F +     R+  TWNA+I G   +G  E+A   F QM    + P+ VT  ++
Sbjct: 364 SIDLALQVFRRMRV--RNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIAL 421

Query: 520 LPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK- 577
           L AC+  G ++ G         ++ ++  +     ++D+  ++  ++ A      +P K 
Sbjct: 422 LCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKA 481

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV--DEGLQ 635
           NSV + T++      G  + A  + R +    +EPD+     +LS   YAG+   D  L+
Sbjct: 482 NSVLWATLLGACRSGGHFDLAEKIGRRV--IELEPDSCGRYVMLSNL-YAGVSQWDHALK 538

Query: 636 IFDLMQQE 643
           +   M+ +
Sbjct: 539 LRKQMKNK 546



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 140/575 (24%), Positives = 251/575 (43%), Gaps = 93/575 (16%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSK---ICQEGRPHLARQLFDSITRPTTVI 72
           T      +  Q H+L      L  P   S+L     +   G  + AR+LF  +  P   I
Sbjct: 19  THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78

Query: 73  WNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
            NT+I G+  +  PYEA+ LY  M ++  P    DNYTY  VL ACA    +++G+  HC
Sbjct: 79  CNTMIRGYARSQNPYEAVSLYYFMVERGVPV---DNYTYPFVLAACARLGAVKLGRRFHC 135

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             ++       FV N+L+  Y  C S                  +   C VFD    R+V
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGS------------------FGCACDVFDESTVRDV 177

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           V WN +++ ++      +A      M ++  +RP  ++ V++ PA + LG+ +    ++ 
Sbjct: 178 VTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHS 237

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
              +LG +   +L V ++ + MY +    + A+++F+   E++   W +M+ G  ++ + 
Sbjct: 238 YSKELGLD--ENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYF 295

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA+ LF Q ++L++I  D++T +  LSA +Q   LD G+ +H  I K  +   +++  A
Sbjct: 296 QEALALF-QKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETA 354

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +++                    R+V +WN +I     +G  ++ + L  +M+    M D
Sbjct: 355 LVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPD 414

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFE 469
            VT  ALL A S           HA L+  G+  F+ M              K   QI  
Sbjct: 415 DVTFIALLCACS-----------HAGLVDEGLAMFQAM--------------KNKFQIEP 449

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           + +        +  ++    +   +++A      M    +  N V  A++L AC   G+ 
Sbjct: 450 RMEH-------YGCVVDLLCRARKVDDALAFIENM---PIKANSVLWATLLGACRSGGHF 499

Query: 530 ELGKQLHGFSI--------RYLLDQNVFVGTSLID 556
           +L +++    I        RY++  N++ G S  D
Sbjct: 500 DLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWD 534


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/574 (34%), Positives = 316/574 (55%), Gaps = 64/574 (11%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WNTM+ G+  ++ PV A+E++V+++ L  +  +  +F   L + 
Sbjct: 16  YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLP-NSYSFPFLLKSC 74

Query: 341 SQLQELDLGQQLHAYIIK------NFVALPVI---------------------------- 366
           ++ +  + G+Q+HA ++K       +V   +I                            
Sbjct: 75  AKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCT 134

Query: 367 -----------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                            V + + ERDVVSWN MI+ +V+NG  +E L L  EM +     
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRP 194

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLR----HGIHFE-GMESYLIDMYAKSGLIKTA 464
           D  T+ +++SA +   + ++G+Q H+++      HG      + + LID+Y+K G ++TA
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +FE      +D  +WN +I GYT   L +EA + F++ML     PN VT+ SVLPAC 
Sbjct: 255 FGLFEGLSC--KDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312

Query: 525 PMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
            +G I++G+ +H +  + L  +     + TSLIDMY+K G I  A  VF  +  ++  ++
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             MI G+  HG +  A  LF  M+G  +EPD ITFV +LSACS++GL+D G QIF  M Q
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +Y + P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C+ HG+ ELA
Sbjct: 433 DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGV-IWCSLLKACKKHGNLELA 491

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E  A+KL++++  NS  G +VLLSNIYA  G WE+V +VR  +  +G++K  GCS I+V 
Sbjct: 492 ESFAQKLIKIEPENS--GSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             V+ F   D+ HP+  +IY MLE + +++  AG
Sbjct: 550 SVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAG 583



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 241/490 (49%), Gaps = 63/490 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+T++  N++ WNT++  +  +   V A+  +  M+ +G  P++ SF  +  + +    
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 242 YKSADVVYGLLVKLG---SEYVN--------------------------DLFVASSAIFM 272
           ++    ++  ++KLG     YV+                          D+   ++ I  
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA  G F  ARK+FD   ER+   WN MI GYV+N    EA+ELF +++  + +  D+ T
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN-VRPDEGT 198

Query: 333 FLSALSAVSQLQELDLGQQLHAYI----IKNFVALPVIVLNAVIE--------------- 373
            +S +SA +Q   ++LG+Q+H+++      +  +  + ++NA+I+               
Sbjct: 199 LVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLF 258

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                +DVVSWNT+I  +    L  E L+L  EM + G   + VT+ ++L A ++L   D
Sbjct: 259 EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAID 318

Query: 429 VGKQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +G+  H Y+   L+   +   + + LIDMYAK G I+ A Q+F  N    R  ++WNAMI
Sbjct: 319 IGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF--NSMLYRSLSSWNAMI 376

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLL 544
            G+  +G    AF  F +M  + V P+ +T   +L AC+  G ++LG+Q+    +  Y L
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFR 603
              +     +ID+   SG+   A  +   +P E + V + +++    +HG  E A S   
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF-- 494

Query: 604 SMKGCGIEPD 613
           + K   IEP+
Sbjct: 495 AQKLIKIEPE 504



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 234/493 (47%), Gaps = 45/493 (9%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWNT++ G   ++ P  A+ +Y +M         ++Y++ 
Sbjct: 12  DGLPY-AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLP--NSYSFP 68

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA---------- 161
            +LK+CA+++    G+ +H   ++      R+V+ SL++MY+      DA          
Sbjct: 69  FLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHR 128

Query: 162 EMVGLKYVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           ++V    +   Y+    +    KVFD +  R+VV+WN +++ YV+  RY EA+  F+ M+
Sbjct: 129 DVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMM 188

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE--YVNDLFVASSAIFMYAEL 276
           R  +RP   + V+V  A +  G  +    V+  +     +  + + L + ++ I +Y++ 
Sbjct: 189 RTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC 248

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS 
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECP-NDVTLLSV 307

Query: 337 LSAVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIER 374
           L A + L  +D+G+ +H YI K                        +     V N+++ R
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            + SWN MI  F  +G  +    L   M+      D +T   LLSA S+    D+G+Q  
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427

Query: 435 AYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
             + +       +E Y  +ID+   SGL K A ++       + D   W +++    ++G
Sbjct: 428 KSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPM-EPDGVIWCSLLKACKKHG 486

Query: 493 LLEEAFVAFRQML 505
            LE A  +F Q L
Sbjct: 487 NLELA-ESFAQKL 498



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 199/409 (48%), Gaps = 44/409 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD IT    V WN +I G+V N    EA+ L+ +M +++     D  T  SV+ AC
Sbjct: 149 ARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN--VRPDEGTLVSVVSAC 206

Query: 118 AETRNLRIGKAVHC-----HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           A++ ++ +G+ VH           FS+  + V N+L+++YS C             VE  
Sbjct: 207 AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIV-NALIDLYSKCGD-----------VETA 254

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           +        +F+ +  ++VV+WNT++  Y  T  Y EA+  F+ MLR G  P+ ++ ++V
Sbjct: 255 FG-------LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSV 307

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA + LG       ++  + K      N+  + +S I MYA+ G  + A ++F++ L R
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI G+  +     A +LF + +  + +  DD+TF+  LSA S    LDLG+Q+
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSR-MRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              + +++   P           +  +  MI     +GL  E   +++ M  +    D V
Sbjct: 427 FKSMTQDYNLTP----------KLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEP---DGV 473

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
              +LL A     N ++ +     L++  I  E   SY++  ++YA +G
Sbjct: 474 IWCSLLKACKKHGNLELAESFAQKLIK--IEPENSGSYVLLSNIYATAG 520


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 217/711 (30%), Positives = 365/711 (51%), Gaps = 59/711 (8%)

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVY------NSLLNMYSTCLSSLDAEMVGLKYVE 170
           C+  R+L  G+ VH H +   S   RF+       N L+ MY  C +   A +V      
Sbjct: 52  CSRLRSLPQGRLVHRHLLAS-SARDRFLAHNTILSNHLITMYGRCGAPDSARVV------ 104

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                       FD M  RN V+W  +++ + +  R  +A+  F  MLR G  P   +  
Sbjct: 105 ------------FDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALG 152

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +   A S LGD      V+   +K   E  +DL V ++ + MY++ G       +F+   
Sbjct: 153 SAICACSELGDLGLGRQVHAQAIKW--ESGSDLIVQNALVTMYSKSGSVGDGFALFERIR 210

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL-QELDLG 349
           +++   W ++I G  Q    ++A+++F +++       ++  F S   A S +   L+ G
Sbjct: 211 DKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYG 270

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
           +Q+H   +K                    N +     V   +   D+VSWN++I+AF   
Sbjct: 271 EQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAK 330

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           GL  E ++L  EM+  G   D +TV ALL A         G+  H+YL++ G+  + + S
Sbjct: 331 GLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVS 390

Query: 450 -YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
             L+ MYA+     +A  +F  +++ DRD  TWN+++    Q+  LE+ F  F   L H 
Sbjct: 391 NSLLSMYARCLDFSSAMDVF--HETHDRDVVTWNSILTACVQHQHLEDVFKLFS--LLHR 446

Query: 509 VTPNV--VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             P++  +++ +VL A   +G  E+ KQ+H ++ +  L  +  +   LID Y+K G ++ 
Sbjct: 447 SMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDD 506

Query: 567 AANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           A  +F  +     V +++++I+GY Q G ++ AL LF  M+  G++P+ +TFV VL+ACS
Sbjct: 507 ANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACS 566

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
             GLVDEG   + +M+ EY I P+ EH  CV D+L R G++ EA +FV ++  E +++ +
Sbjct: 567 RVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDII-M 625

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL + R H   ++ +  A+ +L +D  +S    +VLL NIYA  GNW    +++K+M
Sbjct: 626 WKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAA--YVLLCNIYASSGNWNEFARLKKDM 683

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           R  G++K  G SWI + G +  F  +D+ HP+S +IY MLE + +EM  AG
Sbjct: 684 RSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGLEMVKAG 734



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/576 (26%), Positives = 281/576 (48%), Gaps = 56/576 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  AR +FD +     V W  +I     N+   +A+ L+S M +S   T  D +   S
Sbjct: 96  GAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSG--TMPDQFALGS 153

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            + AC+E  +L +G+ VH   I+  S     V N+L+ MYS   S      VG  +    
Sbjct: 154 AICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGS------VGDGFA--- 204

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVN 231
                    +F+ +R +++++W +I++   +  R ++A++ FR M+  G+  P+   F +
Sbjct: 205 ---------LFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGS 255

Query: 232 VFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           VF A S  +   +  + ++G+ VK   +   + +   S   MYA     D ARK+F    
Sbjct: 256 VFRACSVVVNSLEYGEQIHGVSVKY--QLDRNSYAGCSLSDMYARCNELDSARKVFYRIE 313

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +   WN++I  +       EA+ LF ++ +   +  D +T ++ L A      L  G+
Sbjct: 314 SPDLVSWNSLINAFSAKGLLSEAMVLFSEMRD-SGLRPDGITVMALLCACVGYDALHQGR 372

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            +H+Y++K  +   VIV N+++                    +RDVV+WN++++A VQ+ 
Sbjct: 373 SIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQ 432

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
             ++   L   + +    +D +++  +LSA++ L   ++ KQ HAY  + G+  + M S 
Sbjct: 433 HLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSN 492

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID YAK G +  A ++FE   +G RD  +W+++I GY Q G  +EA   F +M    V
Sbjct: 493 GLIDTYAKCGSLDDANKLFEIMGTG-RDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 551

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINY 566
            PN VT   VL AC+ +G ++ G   + +SI    Y +       + ++D+ +++G ++ 
Sbjct: 552 KPNHVTFVGVLTACSRVGLVDEG--CYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSE 609

Query: 567 AANVFAKIP-EKNSVTYTTMILGYGQHG---MSERA 598
           AA    ++P E + + + T++     H    M +RA
Sbjct: 610 AAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRA 645



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 183/403 (45%), Gaps = 37/403 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F  I  P  V WN++I  F    L  EA++L+S+M+ S      D  T  ++L AC
Sbjct: 305 ARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP--DGITVMALLCAC 362

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+++H + ++        V NSLL+MY+ CL               D+S   
Sbjct: 363 VGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCL---------------DFSS-- 405

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF     R+VV WN+I++  V+ +   +  + F ++ R       IS  NV  A +
Sbjct: 406 -AMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASA 464

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-NCLERNTEV 296
            LG ++    V+    K+G   V D  +++  I  YA+ G  D A K+F+     R+   
Sbjct: 465 ELGYFEMVKQVHAYAFKVG--LVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFS 522

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+++I GY Q  +  EA++LF ++  L  +  + VTF+  L+A S++  +D G   ++ +
Sbjct: 523 WSSLIVGYAQFGYAKEALDLFARMRNLG-VKPNHVTFVGVLTACSRVGLVDEGCYYYSIM 581

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
              +  +P         R+  S   ++    + G   E    V +M    F  D +    
Sbjct: 582 KPEYGIVPT--------REHCS--CVLDLLARAGRLSEAAKFVDQMP---FEPDIIMWKT 628

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LL+A+    + D+GK+    +L            L ++YA SG
Sbjct: 629 LLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSG 671


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 218/761 (28%), Positives = 389/761 (51%), Gaps = 51/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQLFD +       W  ++  +       EA+ L+  M  S  Y   + +T S+ L++C
Sbjct: 69  ARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYP--NEFTLSTALRSC 126

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  R    G        +   + +  + ++L++ YS C  + +A                
Sbjct: 127 SALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAY--------------- 171

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF+ M   ++V+W  +VS +V+   + +A++ +  M++ G+ P+  +FV +  A S
Sbjct: 172 ---RVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASS 228

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG      +V+  L+    E   +L + ++ + MY +    + A K+    LE +  +W
Sbjct: 229 FLG-LNYGKLVHAHLMMWRIEL--NLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLW 285

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             +I G+ Q+    EAI  F + +E   +V ++ T+   L+A S +  LDLG+Q+H+ ++
Sbjct: 286 TAIISGFTQSLKFREAITAFHE-METSGVVPNNFTYSGILNACSSILALDLGKQIHSRVV 344

Query: 358 ---------------------KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                                 N +   V     +   +V+SW ++I+ F ++GL++E +
Sbjct: 345 MAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESI 404

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMY 455
            +   MQ  G   +S T++ +L A   +++    ++ H Y++++    + +  + L+D Y
Sbjct: 405 KVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAY 464

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A  G++  A  +        RD  T+ ++     Q G  E A      M + +V  +  +
Sbjct: 465 AGLGMVDDAWHVTSMMKH--RDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFS 522

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +AS L A   +  +E GKQLH +S++  L   + V   L+D+Y K G I+ A   F +I 
Sbjct: 523 LASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEIT 582

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E ++V++  +I G   +G    ALS F  M+  G+EPD IT + VL ACS+ GLVD GL 
Sbjct: 583 EPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLD 642

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            F  M++++ I+P  +HY C+ D+LGR G++ EA   ++ +  + + L I+ +LLG+C+L
Sbjct: 643 YFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDAL-IYKTLLGACKL 701

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG+  L E +A++ LE+D  +  P ++VLL+N+Y + G  E  +K R+ MRERG+RK  G
Sbjct: 702 HGNIPLGEHMARQGLELDPSD--PAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPG 759

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SW++    V+ F + D  HPQ  KI+E +E L  + RN G
Sbjct: 760 QSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQG 800



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 294/605 (48%), Gaps = 57/605 (9%)

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
           +R++R G  +H   I+       F+ N+LL++Y  C    +A                  
Sbjct: 28  SRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR----------------- 70

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            ++FD M  R+V +W  ++S Y K   + EA+  F  ML  G  P+  +      + S+L
Sbjct: 71  -QLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            ++        L+ K G  + ++  + S+ I  Y++ GC   A ++F+     +   W  
Sbjct: 130 REFNHGTRFQALVTKSG--FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTM 187

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+  +V+     +A++L+ ++++   +  ++ TF+  L+A S L  L+ G+ +HA+++  
Sbjct: 188 MVSSFVEAGSWSQALQLYHRMIQTG-VAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMW 245

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            + L +++  A++                    E DV  W  +IS F Q+    E +   
Sbjct: 246 RIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAF 305

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK- 457
           +EM+  G + ++ T + +L+A S++   D+GKQ H+ ++  G+  +  + + L+DMY K 
Sbjct: 306 HEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKC 365

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           S +I+ A + F    S   +  +W ++IAG++++GL EE+   F  M    V PN  T++
Sbjct: 366 SNMIEDAVRAFRGIAS--PNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLS 423

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ++L AC  + ++   ++LHG+ I+   D +V VG +L+D Y+  G+++ A +V + +  +
Sbjct: 424 TILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHR 483

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + +TYT++     Q G  E AL++   M    +  D  +  + LSA +   +++ G Q+ 
Sbjct: 484 DVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQL- 542

Query: 638 DLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
                 Y ++     +  V+    D+ G+ G + +A+    E+ E   V   W  L+   
Sbjct: 543 ----HCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAV--SWNGLIFGL 596

Query: 694 RLHGH 698
             +GH
Sbjct: 597 ASNGH 601



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +  ++  CN   ++  G  +H   I+    +++F+  +L+ +Y K   +  A  +F ++P
Sbjct: 19  LKDIVSFCNSR-SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMP 77

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            ++  ++T ++  YG+ G  E AL LF SM   G  P+  T    L +CS
Sbjct: 78  CRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCS 127


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 208/716 (29%), Positives = 371/716 (51%), Gaps = 54/716 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNP-------SRFVYNSLLNMYSTCLSSLDAE 162
           Y++++ AC+  R+L  G+ VH H +   S+        +  + N L+ MY  C +     
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAP---- 102

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                         D   +VFD M  RN V+W ++++ +V+  R  +A+  F  MLR G 
Sbjct: 103 --------------DSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGT 148

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
                +  +   A + LGD  +   V+   +K  SE  +DL V ++ + MY++ G  D  
Sbjct: 149 AADQFALGSAVRACTELGDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDG 206

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             +F+   +++   W ++I G+ Q    +EA+++F +++       ++  F SA  A   
Sbjct: 207 FMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGA 266

Query: 343 LQELDLGQQLHAYIIKNFVALPVIV---LNAVIER-----------------DVVSWNTM 382
           +   + G+Q+H   IK  +   + V   L+ +  R                 D+VSWN++
Sbjct: 267 VGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSI 326

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++A+   GL  E L+L  EM+  G   D +TV  LL A         G+  H+YL++ G+
Sbjct: 327 VNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGL 386

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + + L+ MYA+   + +A  +F  ++  D+D  TWN+++    Q+   EE    F
Sbjct: 387 DGDVSVCNSLLSMYARCSDLSSAMDVF--HEIKDQDVVTWNSILTACAQHNHPEEVLKLF 444

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
             + +   + + +++ +VL A   +G  E+ KQ+H ++ +  L  +  +  +LID Y+K 
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKC 504

Query: 562 GVINYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           G ++ A  +F  +     V +++++I+GY Q G ++ A  LF  M+  GI P+ +TF+ V
Sbjct: 505 GSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGV 564

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L+ACS  G V+EG   + +M+ EY I P+ EH  C+ D+L R GK+ EA  F+ ++  E 
Sbjct: 565 LTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEP 624

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +++ +W +LL + ++H   E+ +  A+ +L +D  +S    +VLL NIYA  GNW    +
Sbjct: 625 DII-MWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAA--YVLLCNIYAASGNWNEFAR 681

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++K MR  G++K  G SW+ + G +  F  +D+ HP+S +IY MLE + MEM  AG
Sbjct: 682 LKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAG 737



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 164/615 (26%), Positives = 292/615 (47%), Gaps = 65/615 (10%)

Query: 22  PQLPQIH------SLSPPIPKLKTPTIRSRLSKICQEGR---PHLARQLFDSITRPTTVI 72
           PQ  ++H      S S P  +L   T+      I   GR   P  ARQ+FD +     V 
Sbjct: 61  PQGRRVHRHLVASSSSSPDAQLAGNTVLGN-HLITMYGRCAAPDSARQVFDEMPARNPVS 119

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           W ++I   V N    +A+ L+S M +S   T+ D +   S ++AC E  ++  G+ VH H
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSG--TAADQFALGSAVRACTELGDVGTGRQVHAH 177

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            ++        V N+L+ MYS      D  M                  +F+ ++ ++++
Sbjct: 178 ALKSERGSDLIVQNALVTMYSKNGLVDDGFM------------------LFERIKDKDLI 219

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPALSSLGDYKSADVVYGL 251
           +W +I++ + +    +EA++ FR M+  G   P+   F + F A  ++G ++  + ++GL
Sbjct: 220 SWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 279

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +K   +   DL+V  S   MYA     D AR  F      +   WN+++  Y       
Sbjct: 280 SIKYRLD--RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS 337

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           EA+ LF ++ +   +  D +T    L A      L  G+ +H+Y++K  +   V V N++
Sbjct: 338 EALVLFSEMRD-SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSL 396

Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +                    ++DVV+WN++++A  Q+   +E L L   + K    +D 
Sbjct: 397 LSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDR 456

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEK 470
           +++  +LSA++ L   ++ KQ HAY  + G+  + M S  LID YAK G +  A ++FE 
Sbjct: 457 ISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEI 516

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             + +RD  +W+++I GY Q G  +EAF  F +M    + PN VT   VL AC+ +G + 
Sbjct: 517 MGN-NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVN 575

Query: 531 LGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
            G   + +SI    Y +       + ++D+ +++G +  AAN   ++P E + + + T++
Sbjct: 576 EG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLL 633

Query: 587 LGYGQHG---MSERA 598
                H    M +RA
Sbjct: 634 AASKMHNDMEMGKRA 648


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/558 (34%), Positives = 308/558 (55%), Gaps = 29/558 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A+  I MY++L   + AR +      RN   W +++ G  QN H   A+  F + +  
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFE-MRR 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV---------------- 367
           + +  +D TF     AV+ L+    G+Q+HA  +K    L V V                
Sbjct: 102 EGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161

Query: 368 ----LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                + + ER++ +WN  IS  V +G   E +    E ++ G   +S+T    L+A S+
Sbjct: 162 ARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
               D+G Q H  + R G   +  + + LID Y K   I+++  IF   + G ++  +W 
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFA--EMGMKNAVSWC 279

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++A Y QN   E+A V + +  +  V  +   I+SVL AC  M  +ELG+ +H  +++ 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            +++N+FVG++L+DMY K G I  +   F ++PEKN VT  ++I GY   G  + AL+LF
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399

Query: 603 RSM--KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
             M  +GCG  P+ +TFV++LSACS AG V+ G++IFD M+  Y I+P  EHY C+ DML
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDML 459

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G V +A+EF+K++  +  +  +WG+L  +CR+HG   L  + A+ L ++D ++S  G
Sbjct: 460 GRAGMVEQAFEFIKKMPIKPTI-SVWGALQNACRMHGKPHLGILAAENLFKLDPKDS--G 516

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            HVLLSN +A  G W   + VR+EM+  G++K  G SWI V   V+ F +KD+ H  + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKE 576

Query: 781 IYEMLERLAMEMRNAGNK 798
           I  ML +L  +M  AG K
Sbjct: 577 IQTMLTKLRNKMEAAGYK 594



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 237/496 (47%), Gaps = 52/496 (10%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +LK    T ++R+G+ VH   ++   S P  F+ N L+NMYS       A +V L+    
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV-LRLTPA 70

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                            RNVV+W ++VS   +   +  A+ +F  M R G+ P+  +F  
Sbjct: 71  -----------------RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPC 113

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           VF A++SL    +   ++ L VK G   + D+FV  SA  MY +    D ARK+FD   E
Sbjct: 114 VFKAVASLRLPVTGKQIHALAVKCGR--ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 171

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN E WN  I   V +  P EAIE F++   +     + +TF   L+A S    LDLG Q
Sbjct: 172 RNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQP-NSITFCGFLNACSDGLLLDLGMQ 230

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H  + ++     V V N +I+                    ++ VSW ++++A+VQN  
Sbjct: 231 MHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHE 290

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGME 448
           D++  +L    +K+        ++++LSA + +   ++G+  HA+ ++  +    F G  
Sbjct: 291 DEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVG-- 348

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L+DMY K G I+ + Q F+  +  +++  T N++I GY   G ++ A   F  M    
Sbjct: 349 SALVDMYGKCGCIEDSEQAFD--EMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRG 406

Query: 509 V--TPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
               PN +T  S+L AC+  G +E G K        Y ++      + ++DM  ++G++ 
Sbjct: 407 CGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVE 466

Query: 566 YAANVFAKIPEKNSVT 581
            A     K+P K +++
Sbjct: 467 QAFEFIKKMPIKPTIS 482



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 200/475 (42%), Gaps = 73/475 (15%)

Query: 31  SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAI 90
           SPP P L    I +  SK+     P  AR +         V W +++ G   N     A+
Sbjct: 38  SPPPPFLANYLI-NMYSKL---DHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTAL 93

Query: 91  LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
             + +M++     + +++T+  V KA A  R    GK +H   ++C      FV  S  +
Sbjct: 94  FEFFEMRREG--VAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           MY       DA                   K+FD +  RN+  WN  +S  V   R  EA
Sbjct: 152 MYCKTRLRDDAR------------------KLFDEIPERNLETWNAYISNSVTDGRPKEA 193

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG---------SEYVN 261
           +  F    R+G +P++I+F     A S            GLL+ LG         S +  
Sbjct: 194 IEAFIEFRRIGGQPNSITFCGFLNACSD-----------GLLLDLGMQMHGLVFRSGFDT 242

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ V +  I  Y +      +  IF     +N   W +++  YVQN+   +A  L+++  
Sbjct: 243 DVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302

Query: 322 ELDEIV-FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
           +  EIV   D    S LSA + +  L+LG+ +HA+ +K  V   + V +A++        
Sbjct: 303 K--EIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGC 360

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF--MIDSVTVTALL 418
                       E+++V+ N++I  +   G  D  L L  +M  +G     + +T  +LL
Sbjct: 361 IEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLL 420

Query: 419 SAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           SA S     + G +    +   +GI   G E Y  ++DM  ++G+++ A +  +K
Sbjct: 421 SACSRAGAVENGMKIFDSMKSTYGIE-PGAEHYSCIVDMLGRAGMVEQAFEFIKK 474



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 140/334 (41%), Gaps = 24/334 (7%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIR-SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P    QIH+L+    ++    +  S     C+      AR+LFD I       WN  I  
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISN 183

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
            V +  P EAI  + + ++       ++ T+   L AC++   L +G  +H    R   +
Sbjct: 184 SVTDGRPKEAIEAFIEFRRIGGQP--NSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFD 241

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
               VYN L++ Y  C     +E+                  +F  M  +N V+W ++V+
Sbjct: 242 TDVSVYNGLIDFYGKCKQIRSSEI------------------IFAEMGMKNAVSWCSLVA 283

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            YV+     +A   +    +  +  S     +V  A + +   +    ++   VK   E 
Sbjct: 284 AYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE- 342

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             ++FV S+ + MY + GC + + + FD   E+N    N++IGGY        A+ LF  
Sbjct: 343 -RNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFED 401

Query: 320 VLELD-EIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +         + +TF+S LSA S+   ++ G ++
Sbjct: 402 MAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 198/641 (30%), Positives = 322/641 (50%), Gaps = 86/641 (13%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
            + ++++++  + ++  +   +  F  +  + + P      +   + +SL        ++
Sbjct: 68  TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
                 G  ++ D  VASS   MY +      ARK+FD   +R+  VW+ MI GY +   
Sbjct: 128 AFAAASG--FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGL 185

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA ELF ++                                                +
Sbjct: 186 VEEAKELFGEMR-----------------------------------------------S 198

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
             +E ++VSWN M++ F  NG  DE + +   M  QGF  D  TV+ +L A   L +  V
Sbjct: 199 GGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVV 258

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFE------------------- 469
           G Q H Y+++ G+  +  + S ++DMY K G +K   ++F+                   
Sbjct: 259 GAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSR 318

Query: 470 --------------KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
                         K+   + +  TW ++IA  +QNG   EA   FR M  + V PN VT
Sbjct: 319 NGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVT 378

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           I S++PAC  +  +  GK++H FS+R  +  +V+VG++LIDMY+K G I  A   F K+ 
Sbjct: 379 IPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMS 438

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
             N V++  ++ GY  HG ++  + +F  M   G +PD +TF  VLSAC+  GL +EG +
Sbjct: 439 ALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWR 498

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            ++ M +E+ I+P  EHY C+  +L RVGK+ EAY  +KE+  E +   +WG+LL SCR+
Sbjct: 499 CYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDAC-VWGALLSSCRV 557

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H +  L E+ A+KL  ++  N  PG ++LLSNIYA +G W+  +++R+ M+ +GLRK  G
Sbjct: 558 HNNLSLGEIAAEKLFFLEPTN--PGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPG 615

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SWI+VG  V+   + DQ HPQ   I E L++L M+M+ +G
Sbjct: 616 YSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSG 656



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 214/512 (41%), Gaps = 92/512 (17%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P L+  L   +  PT   ++++I  F  ++     +  +S +         D +   S +
Sbjct: 54  PQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIP--DAFLLPSAI 111

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRF-----VYNSLLNMYSTCLSSLDAEMVGLKYV 169
           K+CA  R L  G+ +H      F+  S F     V +SL +MY  C   LDA  +  +  
Sbjct: 112 KSCASLRALDPGQQLHA-----FAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMP 166

Query: 170 EVD----------YSKYDLV---CKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVR 212
           + D          YS+  LV    ++F  MR      N+V+WN +++ +     Y EAV 
Sbjct: 167 DRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVG 226

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
            FRMML  G  P   +   V PA+  L D      V+G ++K G    +D FV S+ + M
Sbjct: 227 MFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQG--LGSDKFVVSAMLDM 284

Query: 273 YAELGCFDFARKIFDNC-----------------------------------LERNTEVW 297
           Y + GC     ++FD                                     +E N   W
Sbjct: 285 YGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTW 344

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I    QN   +EA+ELF + ++   +  + VT  S + A   +  L  G+++H + +
Sbjct: 345 TSIIASCSQNGKDLEALELF-RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSL 403

Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
           +  +   V V +A+I+                     ++VSWN ++  +  +G   E + 
Sbjct: 404 RRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETME 463

Query: 398 LVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
           + + M + G   D VT T +LSA A N   ++  +  ++    HGI    ME Y  L+ +
Sbjct: 464 MFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIE-PKMEHYACLVTL 522

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
            ++ G ++ A  I  K    + D   W A+++
Sbjct: 523 LSRVGKLEEAYSII-KEMPFEPDACVWGALLS 553



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 121/271 (44%), Gaps = 8/271 (2%)

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAG 487
            +Q HA +LR  +  +  + + L+  YA +  + T +     +         +++++I  
Sbjct: 19  ARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHA 78

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           + ++         F  +    + P+   + S + +C  +  ++ G+QLH F+       +
Sbjct: 79  FARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTD 138

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
             V +SL  MY K   I  A  +F ++P+++ V ++ MI GY + G+ E A  LF  M+ 
Sbjct: 139 SIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRS 198

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG-----R 662
            G+EP+ +++  +L+     G  DE + +F +M  +    P      CV   +G      
Sbjct: 199 GGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCVLPAVGCLEDVV 257

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           VG  V  Y   + LG +  V+     + G C
Sbjct: 258 VGAQVHGYVIKQGLGSDKFVVSAMLDMYGKC 288



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 24/211 (11%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLF----DSITRPTTVIWNTIIIGFVCNNLPYEA 89
           + +++  ++ + L+ + + G    A ++F    D       V W +II     N    EA
Sbjct: 301 VEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEA 360

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + L+  M+        +  T  S++ AC     L  GK +HC  +R       +V ++L+
Sbjct: 361 LELFRDMQAYG--VEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALI 418

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           +MY+ C                   +  L  + FD M   N+V+WN ++  Y    +  E
Sbjct: 419 DMYAKC------------------GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKE 460

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            +  F MML+ G +P  ++F  V  A +  G
Sbjct: 461 TMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 210/623 (33%), Positives = 323/623 (51%), Gaps = 70/623 (11%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+T +  N++ WNT++     +   V  +  +  M+  G  P+  +F  +  + +    
Sbjct: 39  VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           ++    ++  ++KLG E   D +  +S I MYA  G  + ARK+FD   +R+      +I
Sbjct: 99  FEEGRQIHAQVMKLGCEL--DRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALI 156

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY        A +           VFD +T                             
Sbjct: 157 TGYASRGDVRSARK-----------VFDXIT----------------------------- 176

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      ERDVVSWN MI+ +V+N   +E L L  EM +     D  T+ ++LSA 
Sbjct: 177 -----------ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC 225

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESYL------IDMYAKSGLIKTARQIFEKNDSGD 475
           +   + ++G++ H  +  H     G  S L      I +Y+K G ++ A  +FE      
Sbjct: 226 AQSGSIELGREIHTLVDDH----HGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSC-- 279

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D  +WN +I GYT   L +EA + F++ML    +PN VT+ SVLPAC  +G I++G+ +
Sbjct: 280 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 339

Query: 536 HGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           H +  + L  +     + TSLIDMY+K G I  A  VF  +  K+  ++  MI G+  HG
Sbjct: 340 HVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHG 399

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            +  A  LF  M+  GIEPD IT V +LSACS++GL+D G  IF  + Q+Y I P  EHY
Sbjct: 400 RANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHY 459

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ ELAE  A+KL+E++
Sbjct: 460 GCMIDLLGHAGLFKEAEEIIHMMPMEPDGV-IWCSLLKACKMHGNLELAESFAQKLMEIE 518

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
             NS  G +VLLSNIYA  G WE+V ++R+ +  +G++K  GCS I++   V+ F   D+
Sbjct: 519 PENS--GSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDK 576

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HPQS +IY MLE + + +  AG
Sbjct: 577 LHPQSREIYRMLEEMDVLLEEAG 599



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 238/505 (47%), Gaps = 48/505 (9%)

Query: 44  SRLSKICQ-----EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           S+L ++C      +G P+ A  +F++   P  +IWNT++ G   ++     + +Y +M  
Sbjct: 18  SKLLELCVVSPHFDGLPY-AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVS 76

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                  + YT+  +LK+CA+++    G+ +H   ++      R+ + SL++MY+     
Sbjct: 77  XGHVP--NAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRL 134

Query: 159 LDAEMVGLKYVEVDY-----------SKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTE 205
            DA  V     + D            S+ D+    KVFD +  R+VV+WN +++ YV+  
Sbjct: 135 EDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENC 194

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            Y EA+  F+ M+R  +RP   + V+V  A +  G  +    ++  LV     + + L +
Sbjct: 195 GYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIH-TLVDDHHGFGSSLKI 253

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            ++ I +Y++ G  + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E
Sbjct: 254 VNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 313

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYI------IKNFVALPVI------------- 366
              +DVT LS L A + L  +D+G+ +H YI      + N  AL                
Sbjct: 314 SP-NDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEA 372

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V N+++ + + SWN MI  F  +G  +    L   M+K G   D +T+  LLSA S+
Sbjct: 373 AHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSH 432

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
               D+G+     + +       +E Y  +ID+   +GL K A +I       + D   W
Sbjct: 433 SGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM-EPDGVIW 491

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLE 506
            +++     +G LE A    ++++E
Sbjct: 492 CSLLKACKMHGNLELAESFAQKLME 516



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 39/415 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD IT    V WN +I G+V N    EA+ L+ +M +++     D  T  SVL AC
Sbjct: 168 ARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN--VRPDEGTLVSVLSAC 225

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           A++ ++ +G+ +H          S   + N+ + +YS C                     
Sbjct: 226 AQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKC------------------GDV 267

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           ++   +F+ +  ++VV+WNT++  Y     Y EA+  F+ MLR G  P+ ++ ++V PA 
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LG       ++  + K      N   + +S I MYA+ G  + A ++F++ + ++   
Sbjct: 328 AHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSS 387

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN MI G+  +     A +LF + +  + I  DD+T +  LSA S    LDLG+ +   +
Sbjct: 388 WNAMIFGFAMHGRANAAFDLFSR-MRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSV 446

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            +++   P           +  +  MI      GL  E   +++ M  +    D V   +
Sbjct: 447 TQDYNITP----------KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEP---DGVIWCS 493

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQIFE 469
           LL A     N ++ +     L+   I  E   SY++  ++YA +G  +   +I E
Sbjct: 494 LLKACKMHGNLELAESFAQKLME--IEPENSGSYVLLSNIYATAGRWEDVARIRE 546



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 39/253 (15%)

Query: 433 THAYLLRHGIHFEGME-SYLIDMYAKS----GLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           THA +++ G+H      S L+++   S    GL   A  +FE     + +   WN M+ G
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGL-PYAVSVFETXQ--EPNLLIWNTMLRG 57

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
              +  L      + +M+     PN  T   +L +C      E G+Q+H   ++   + +
Sbjct: 58  LASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELD 117

Query: 548 VFVGTSLIDMYSKSG-----------------------VINYAA--------NVFAKIPE 576
            +  TSLI MY+++G                       +  YA+         VF  I E
Sbjct: 118 RYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITE 177

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ V++  MI GY ++   E AL LF+ M    + PD  T V+VLSAC+ +G ++ G +I
Sbjct: 178 RDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREI 237

Query: 637 FDLMQQEYKIQPS 649
             L+   +    S
Sbjct: 238 HTLVDDHHGFGSS 250


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 218/761 (28%), Positives = 396/761 (52%), Gaps = 50/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LF+ +     V W ++++G+  +  P E + +Y +M++     S +  T+++V  +C
Sbjct: 250 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG--VSGNQNTFATVTSSC 307

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +  +G  V  H I+     S  V NSL++M+S+                  +S  +
Sbjct: 308 GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS------------------FSSVE 349

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C VFD M   ++++WN ++S Y       E++R F  M  +    ++ +  ++    S
Sbjct: 350 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 409

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+ + K    ++GL+VKLG +  +++ + ++ + +Y+E G  + A  +F    ER+   W
Sbjct: 410 SVDNLKWGRGIHGLVVKLGLD--SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 467

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+  YVQ+   ++ +++  ++L++ + V + VTF SAL+A S  + L   + +HA II
Sbjct: 468 NSMMACYVQDGKCLDGLKILAELLQMGK-VMNHVTFASALAACSNPECLIESKIVHALII 526

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
                  +IV NA++                    + D V+WN +I    +N   +E + 
Sbjct: 527 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 586

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
               ++++G   + +T+ ++L A S   +    G   HA+++  G   +  +++ LI MY
Sbjct: 587 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 646

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G + ++  IF+    G++   TWNAM+A    +G  EEA   F +M    V  +  +
Sbjct: 647 AKCGDLNSSNYIFD--GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 704

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            +  L A   +  +E G+QLHG  I+   + ++ V  + +DMY K G ++    +  +  
Sbjct: 705 FSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 764

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ +++  +I  + +HG  ++A   F  M   G +PD +TFV++LSAC++ GLVDEGL 
Sbjct: 765 NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 824

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            +D M +E+ + P  EH  C+ D+LGR G++  A  F+KE+    N L  W SLL +CR+
Sbjct: 825 YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA-WRSLLAACRI 883

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG+ ELA   A+ LLE+D  +     +VL SN+ A  G WE+V+ +RKEM    ++K+  
Sbjct: 884 HGNLELARKTAEHLLELDPSDDSA--YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPA 941

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSW+ +   V+ F   ++ HPQ+ +I   L  L    + AG
Sbjct: 942 CSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAG 982



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 180/714 (25%), Positives = 329/714 (46%), Gaps = 56/714 (7%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
            +T T+ +  SK    G    AR +FD +       W+T++ G+V   L  EA+ L+ QM
Sbjct: 130 FQTNTLINMYSKF---GNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM 186

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
                    + +  +S++ AC+ +  +   G  VH   ++       +V  +L++ Y + 
Sbjct: 187 WGLG--VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS- 243

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                   +GL Y            K+F+ M   NVV+W +++  Y  +    E +  ++
Sbjct: 244 --------IGLVYNAQ---------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 286

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M + G+  +  +F  V  +   L D      V G +++ G E  + + VA+S I M++ 
Sbjct: 287 RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE--DSVSVANSLISMFSS 344

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               + A  +FD+  E +   WN MI  Y  +    E++  F  +  L     +  T  S
Sbjct: 345 FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET-NSTTLSS 403

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN--------------------AVIERD 375
            LS  S +  L  G+ +H  ++K  +   V + N                    A+ ERD
Sbjct: 404 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERD 463

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           ++SWN+M++ +VQ+G   +GL ++ E+ + G +++ VT  + L+A SN       K  HA
Sbjct: 464 LISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHA 523

Query: 436 YLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            ++  G H F  + + L+ MY K G++  A+++ +     DR   TWNA+I G+ +N   
Sbjct: 524 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEP 581

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EA  A++ + E  +  N +T+ SVL AC+ P   ++ G  +H   +    + + +V  S
Sbjct: 582 NEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS 641

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LI MY+K G +N +  +F  +  K+ +T+  M+     HG  E AL +F  M+  G+  D
Sbjct: 642 LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLD 701

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
             +F   L+A +   +++EG Q+  L+ +    +          DM G+ G   E ++ +
Sbjct: 702 QFSFSGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCG---EMHDVL 757

Query: 674 KELGEEGNVLEI-WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
           K L +  N   + W  L+ +   HG  + A     ++L++  +     +  LLS
Sbjct: 758 KMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 811



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 264/535 (49%), Gaps = 47/535 (8%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LK  +E  +   GKA+H   I    N   F  N+L+NMYS             K+  +++
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYS-------------KFGNIEH 147

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           ++Y     VFD MR RN  +W+T++S YV+   Y EAV  F  M  +G+ P+     ++ 
Sbjct: 148 ARY-----VFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 202

Query: 234 PALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            A S  G        V+G +VK G   + D++V ++ +  Y  +G    A+K+F+   + 
Sbjct: 203 TACSRSGYMADEGFQVHGFVVKTG--ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 260

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W +++ GY  + +P E + ++ Q +  + +  +  TF +  S+   L++  LG Q+
Sbjct: 261 NVVSWTSLMVGYSDSGNPGEVLNVY-QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQV 319

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
             +II+      V V N++I                    E D++SWN MISA+  +GL 
Sbjct: 320 LGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLC 379

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E L   + M+      +S T+++LLS  S++ N   G+  H  +++ G+     + + L
Sbjct: 380 RESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTL 439

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +Y+++G  + A  +F+     +RD  +WN+M+A Y Q+G   +      ++L+     
Sbjct: 440 LTLYSEAGRSEDAELVFQAMT--ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 497

Query: 512 NVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N VT AS L AC NP   IE  K +H   I       + VG +L+ MY K G++  A  V
Sbjct: 498 NHVTFASALAACSNPECLIE-SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
              +P+ + VT+  +I G+ ++     A+  ++ ++  GI  + IT V+VL ACS
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 13/285 (4%)

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L   S + +Q  GK  HA+ +   ++    ++  LI+MY+K G I+ AR +F+  +   R
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFD--EMRHR 158

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQL 535
           ++A+W+ M++GY + GL EEA   F QM    V PN   +AS++ AC+  G + + G Q+
Sbjct: 159 NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV 218

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           HGF ++  +  +V+VGT+L+  Y   G++  A  +F ++P+ N V++T++++GY   G  
Sbjct: 219 HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 278

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE---GLQIFDLMQQEYKIQPSTEH 652
              L++++ M+  G+  +  TF  V S+C   GL+++   G Q+   + Q Y  + S   
Sbjct: 279 GEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSVSV 334

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
              +  M      V EA  +V +   E +++  W +++ +   HG
Sbjct: 335 ANSLISMFSSFSSVEEAC-YVFDHMNECDIIS-WNAMISAYAHHG 377


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 240/727 (33%), Positives = 370/727 (50%), Gaps = 84/727 (11%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHC-HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           D +T ++ LKAC     L  G  +H    I  F N +  V NSL+NMY            
Sbjct: 65  DEFTVANALKACRGYPLL--GSQIHGFSIIHEFVNVT-IVSNSLMNMYC----------- 110

Query: 165 GLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                     K    CK   +F+ +   ++V+WNT++S    +E        F    +M 
Sbjct: 111 ----------KSGQFCKALCIFENLTHPDIVSWNTVLSGCQTSED------AFSFACKMN 154

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAEL 276
                   V     LS    +  A  + GL     +VK G  +  ++FV ++ I MY+  
Sbjct: 155 SSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFG--FDCEVFVGNALISMYSRW 212

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNN-HPVEAIELFVQVLELDEIVFDDVTFLS 335
           G    AR++F+    R+   WN MI GY Q   + +EAI +F+Q+     +  D ++F S
Sbjct: 213 GHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQMFR-GGMELDRISFTS 271

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
           A+SA    + L+L +Q+H   IK      V V N +I                    ER+
Sbjct: 272 AVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERN 331

Query: 376 VVSWNTMISAFVQNGLDD-EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           VVSW TMIS      +D+ E +    EM+  G   + VT   L+ A +       GK  H
Sbjct: 332 VVSWTTMIS------IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVH 385

Query: 435 AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            +  + G   +  + + +I MYAK   ++ + ++F++     +D   WNA+I+G+  NGL
Sbjct: 386 GFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKY--QDIIAWNALISGFVHNGL 443

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVG 551
            +EA  AF   L  +  PN  +  S+L A     ++ L  G++ H   I+  L+ +  V 
Sbjct: 444 CQEAIRAFFSGLIES-KPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVS 502

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           ++L+DMY+K G I  +  VF + P+++   +TT+I  Y +HG  E  ++ F  M+   + 
Sbjct: 503 SALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVR 562

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD+ITF+++L+AC   G+VD G  +F  M ++Y+I+PS EHY C+ DMLGR G++ EA  
Sbjct: 563 PDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAER 622

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            +  +   G  L +  SLLG+CR+HG+ ++ E VA  L+EM+   S  G +VL+SN+YAE
Sbjct: 623 LMSHI-PGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTES--GSYVLMSNLYAE 679

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY-----VNRFASKDQEHPQSHKIYEMLE 786
            G WE V KVRK MR +G++KEVG SW+DVGG      ++ F+S D  HPQS  I  M E
Sbjct: 680 IGKWEMVAKVRKRMRVKGVKKEVGFSWVDVGGIDSSLSLHGFSSGDTSHPQSEAICRMAE 739

Query: 787 RLAMEMR 793
            L  EM+
Sbjct: 740 CLGFEMK 746



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 155/619 (25%), Positives = 285/619 (46%), Gaps = 68/619 (10%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTI--RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P    QIH  S  I +    TI   S ++  C+ G+   A  +F+++T P  V WNT++ 
Sbjct: 80  PLLGSQIHGFSI-IHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLS 138

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRN--LRIGKAVHCHFIRC 136
           G  C     +A     +M  S      D  TY++VL  C         IG  +H   ++ 
Sbjct: 139 G--CQT-SEDAFSFACKMNSSGVVF--DAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKF 193

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
             +   FV N+L++MYS     ++A                   +VF+ M+ R++V+WN 
Sbjct: 194 GFDCEVFVGNALISMYSRWGHLVEAR------------------RVFEEMKTRDLVSWNA 235

Query: 197 IVSWYVKTERY-VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
           ++S Y +   Y +EA+  F  M R G+    ISF +   A     + + A  ++GL +K 
Sbjct: 236 MISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIK- 294

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
            + +   + V++  I  Y +    + AR +F N  ERN   W TMI     +    EA+ 
Sbjct: 295 -TRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMI-----SIDEAEAVS 348

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-- 373
            F + + LD +  +DVTF+  + A++  + +  G+ +H +  K   +    V N++I   
Sbjct: 349 FFNE-MRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMY 407

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE--MQKQGFMIDSVT 413
                             +D+++WN +IS FV NGL  E +   +   ++ +       +
Sbjct: 408 AKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIESKPNQYSFGS 467

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKND 472
           +   + AA ++ +   G++ H+ +++ G++ + +  S L+DMYAK G I  ++++F   +
Sbjct: 468 ILNAIGAAEDV-SLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFV--E 524

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           +  + Q  W  +I+ Y ++G  E     F +M    V P+ +T  S+L AC   G +++G
Sbjct: 525 TPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMG 584

Query: 533 KQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG--- 588
             L G  ++ Y ++ +    + L+DM  ++G +  A  + + IP    ++    +LG   
Sbjct: 585 CHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACR 644

Query: 589 -YGQHGMSERALSLFRSMK 606
            +G   M ER       M+
Sbjct: 645 VHGNVDMGERVADALMEME 663


>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 245/871 (28%), Positives = 410/871 (47%), Gaps = 156/871 (17%)

Query: 8   LPLPPPPPTATP---------------PPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQE 52
           LP    PP ATP               P     +IH   P  PKLK     + L+ +C+ 
Sbjct: 6   LPCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQ--PLTPKLKPKVTDAHLNHLCKN 63

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A    D+I +                          S +K +         TY  
Sbjct: 64  GRLADAIACLDAIAQGG------------------------SNVKPN---------TYMQ 90

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L++C +  +  +G+ +H   I      + FV   L++MY+ C S  +A           
Sbjct: 91  LLQSCIDQGSAELGRKLHAR-IGLLEEMNPFVETKLVSMYAKCGSLGEAR---------- 139

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVF  MR RN+ AW+ ++  Y + + + E V+ F  M+  GI P       +
Sbjct: 140 --------KVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKI 191

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A  + GD ++  +++ L+++ G  +  ++ V++S + +YA+ G    AR+ F+N   R
Sbjct: 192 LQACGNCGDAETGKLIHSLVIRCGMNF--NIRVSNSILAVYAKCGRLSCARRFFENMDYR 249

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN++I GY Q     ++ +LF ++ E + I    VT+   +++ SQ  + D   +L
Sbjct: 250 DRVSWNSIITGYCQKGELEKSHQLFEKMQE-EGIEPGLVTWNILINSYSQSGKCDDAMEL 308

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
               +++F  +P          DV +W +MIS F QN    + L L  EM   G   + V
Sbjct: 309 MKK-MESFRIVP----------DVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGV 357

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFE-- 469
           TVT+ +SA ++L+    G + H+  ++ G +    + + LIDMY+KSG ++ AR++F+  
Sbjct: 358 TVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMI 417

Query: 470 -KND------------------------------------------------SGDRDQA- 479
            K D                                                +GD DQA 
Sbjct: 418 LKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAM 477

Query: 480 -----------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                            +WN++IAGY QNG   +A   FRQM    + PN VT+ S+LPA
Sbjct: 478 DLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPA 537

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +   +  K++HG  +R  L   + V   LID Y+KSG I YA  +F  I  K+ +++
Sbjct: 538 CANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISW 597

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
            ++I GY  HG S+ AL LF  M   G++P   TF++++ A S +G+VD+G Q+F  M +
Sbjct: 598 NSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME 657

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +Y+I P  EH+  + D+LGR GK+ EA EF++++  E +   IW +LL + ++HG+  LA
Sbjct: 658 DYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSC-IWAALLTASKIHGNIGLA 716

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
               + LLE++  N     H  +  +YA  G +E+V K+RK  +    ++ +GCSWI+  
Sbjct: 717 IRAGECLLELEPSNF--SIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCSWIEAK 774

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             V+ F + D+  P    ++  +E +A +++
Sbjct: 775 NIVHTFVADDRSRPYFDFLHSWIENVARKVK 805


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/536 (35%), Positives = 304/536 (56%), Gaps = 36/536 (6%)

Query: 291  ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            + N   WN++I    +    VEA+  F  + +L  ++    +F   + + S L +L  G+
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLG-LIPTRSSFPCTIKSCSALCDLVSGR 1162

Query: 351  QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
              H           + V +A+I+                    R+VVSW +MI+ +VQN 
Sbjct: 1163 MSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 1222

Query: 391  LDDEGLMLVYEMQKQ--------GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
              D  L+L  +  ++           +DSV + ++LSA S +  + + +  H ++++ G 
Sbjct: 1223 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 1282

Query: 443  HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                G+ + L+D YAK G    ++++F+  +  ++D  +WN+MIA Y Q+GL  EA   F
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWME--EKDDISWNSMIAVYAQSGLSGEALEVF 1340

Query: 502  RQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M+ H  V  N VT+++VL AC   G +  GK +H   I+  L+ NV VGTS+IDMY K
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400

Query: 561  SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
             G +  A   F ++ EKN  ++T M+ GYG HG ++ AL +F  M   G++P+ ITFV+V
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 1460

Query: 621  LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            L+ACS+AGLV+EG   F+ M+ +Y I+P  EHY C+ D+ GR G + EAY  +K +  + 
Sbjct: 1461 LAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP 1520

Query: 681  NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
            + + +WGSLLG+CR+H + +L E+ A+KL E+D  N   GY+VLLSN+YA+ G W +V++
Sbjct: 1521 DFV-VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNC--GYYVLLSNLYADAGRWADVER 1577

Query: 741  VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +R  M+ R L K  G S +++ G V+ F   D+EHP    IY+ LE+L +E++  G
Sbjct: 1578 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 1633



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 187/362 (51%), Gaps = 34/362 (9%)

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +H Y     +A  +++   +      +WN +I A   NGL ++ LML   M  QG   D 
Sbjct: 66  IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADK 125

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIF 468
            T   ++ A +N  + D+GK  H  L+++G  F G   +++ LID Y K G  + A ++F
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYG--FSGDVFVQNNLIDFYFKCGHTRFALKVF 183

Query: 469 EKN----------------DSGDRDQA-------------TWNAMIAGYTQNGLLEEAFV 499
           EK                   GD  +A             +W AMI GY +N   EEA  
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F++M   N+ PN  T+ S++ AC  MG + LG+ +H ++I+  ++  V++GT+LIDMYS
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G I  A  VF  +P K+  T+ +MI   G HG+ + AL+LF  M+   ++PDAITF+ 
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VL AC +   V EG   F  M Q Y I P  EHY C+ ++  R   + EA++  KE+G  
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSL 423

Query: 680 GN 681
            N
Sbjct: 424 AN 425



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 220/442 (49%), Gaps = 34/442 (7%)

Query: 177  DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            +L    +  + + NV +WN++++   +    VEA+R F  + ++G+ P+  SF     + 
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152

Query: 237  SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            S+L D  S  + +      G E   DLFV+S+ I MY++ G    AR +FD    RN   
Sbjct: 1153 SALCDLVSGRMSHQQAFVFGFE--TDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVS 1210

Query: 297  WNTMIGGYVQNNHPVEAIELFVQVLELD-------EIVFDDVTFLSALSAVSQLQELDLG 349
            W +MI GYVQN     A+ LF   LE +        +  D V  +S LSA S++    + 
Sbjct: 1211 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 1270

Query: 350  QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
            + +H +++K      + V N ++                    E+D +SWN+MI+ + Q+
Sbjct: 1271 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 1330

Query: 390  GLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
            GL  E L + + M +  G   ++VT++A+L A ++      GK  H  +++  + +   +
Sbjct: 1331 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCV 1390

Query: 448  ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             + +IDMY K G ++ A++ F++    +++  +W AM+AGY  +G  +EA   F +M+  
Sbjct: 1391 GTSIIDMYCKCGRVEMAKKTFDRMK--EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 1448

Query: 508  NVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V PN +T  SVL AC+  G +E G    +    +Y ++  +     ++D++ ++G +N 
Sbjct: 1449 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 1508

Query: 567  AANVFAKIPEKNSVTYTTMILG 588
            A N+  ++  K        +LG
Sbjct: 1509 AYNLIKRMKMKPDFVVWGSLLG 1530



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 183/409 (44%), Gaps = 41/409 (10%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS------CDNYTYS 111
            AR LFD I     V W ++I G+V N     A+LL+    +             D+    
Sbjct: 1196 ARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMV 1255

Query: 112  SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            SVL AC+      I + VH   ++   + S  V N+L++ Y+ C   L ++         
Sbjct: 1256 SVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK--------- 1306

Query: 172  DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFV 230
                     KVFD M  ++ ++WN++++ Y ++    EA+  F  M+R +G+R + ++  
Sbjct: 1307 ---------KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLS 1357

Query: 231  NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
             V  A +  G  ++   ++  ++K+  EY  ++ V +S I MY + G  + A+K FD   
Sbjct: 1358 AVLLACAHAGALRAGKCIHDQVIKMDLEY--NVCVGTSIIDMYCKCGRVEMAKKTFDRMK 1415

Query: 291  ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            E+N + W  M+ GY  +    EA+++F +++    +  + +TF+S L+A S    ++ G 
Sbjct: 1416 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPNYITFVSVLAACSHAGLVEEGW 1474

Query: 351  QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                 +   +           IE  +  +  M+  F + G  +E   L+  M+ +    D
Sbjct: 1475 HWFNAMKHKY----------DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKP---D 1521

Query: 411  SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             V   +LL A    +N D+G+     L        G    L ++YA +G
Sbjct: 1522 FVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 1570



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 151/333 (45%), Gaps = 48/333 (14%)

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           N +N    +Q HA ++R G+  + + +  LI +Y+  G I  A  +F +    +    TW
Sbjct: 36  NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ--NPCTFTW 93

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N +I   T NGL E+A + ++ M+   +  +  T   V+ AC    +I+LGK +HG  I+
Sbjct: 94  NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAK---------------------------- 573
           Y    +VFV  +LID Y K G   +A  VF K                            
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213

Query: 574 ---IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
              IP KN V++T MI GY ++   E AL LF+ M+   I P+  T V+++ AC+  G++
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273

Query: 631 DEGLQIFDLMQQEYKIQPSTE--HYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
             G  I D     Y I+   E   Y   A  DM  + G + +A E  + +  +   L  W
Sbjct: 274 TLGRGIHD-----YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS--LPTW 326

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
            S++ S  +HG   L +       EM+  N  P
Sbjct: 327 NSMITSLGVHG---LGQEALNLFSEMERVNVKP 356



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/509 (22%), Positives = 218/509 (42%), Gaps = 90/509 (17%)

Query: 56   HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYTSCDNYTYSSV 113
            +LA   +  + +     WN++I          EA+  +S ++K    P  S    ++   
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRS----SFPCT 1148

Query: 114  LKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +K+C+   +L  G+  H   F+  F     FV ++L++MYS C    DA           
Sbjct: 1149 IKSCSALCDLVSGRMSHQQAFVFGFET-DLFVSSALIDMYSKCGQLKDAR---------- 1197

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM--------GIRP 224
                     +FD +  RNVV+W ++++ YV+ E+   A+  F+  L           +  
Sbjct: 1198 --------ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPL 1249

Query: 225  STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             ++  V+V  A S +      + V+G +VK G  +   + V ++ +  YA+ G    ++K
Sbjct: 1250 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKG--FDGSIGVGNTLMDAYAKCGQPLVSKK 1307

Query: 285  IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            +FD   E++   WN+MI  Y Q+    EA+E+F  ++    + ++ VT  + L A +   
Sbjct: 1308 VFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAG 1367

Query: 345  ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
             L  G+ +H  +IK  +   V V  ++I                    E++V SW  M++
Sbjct: 1368 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 1427

Query: 385  AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
             +  +G   E L + Y+M + G   + +T  ++L+A S           HA L+  G H+
Sbjct: 1428 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS-----------HAGLVEEGWHW 1476

Query: 445  EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
                 +  D+  + G+                    +  M+  + + G L EA+   ++M
Sbjct: 1477 FNAMKHKYDI--EPGI------------------EHYGCMVDLFGRAGCLNEAYNLIKRM 1516

Query: 505  LEHNVTPNVVTIASVLPACNPMGNIELGK 533
                + P+ V   S+L AC    N++LG+
Sbjct: 1517 ---KMKPDFVVWGSLLGACRIHKNVDLGE 1542



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 173/418 (41%), Gaps = 82/418 (19%)

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           K+ P T   N      L      +N +  + +H   IR   +  + +   L+++YST   
Sbjct: 15  KNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYST--- 71

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                          + +      +F  ++      WN I+          +A+  ++ M
Sbjct: 72  ---------------HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNM 116

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +  GI     +F  V  A ++        VV+G L+K G  +  D+FV ++ I  Y + G
Sbjct: 117 VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG--FSGDVFVQNNLIDFYFKCG 174

Query: 278 -----------------------------CFDF--ARKIFDNCLERNTEVWNTMIGGYVQ 306
                                        C D   AR+IFD    +N   W  MI GY++
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           N  P EA+ELF + ++ + I  ++ T +S + A +++  L LG+ +H Y IKN + + V 
Sbjct: 235 NQQPEEALELF-KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVY 293

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           +  A+I+                    + + +WN+MI++   +GL  E L L  EM++  
Sbjct: 294 LGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GI-----HFEGMESYLIDMYAKS 458
              D++T   +L A  +++N   G      + +H GI     H+E M     ++YA+S
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECM----TELYARS 407



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 148/327 (45%), Gaps = 18/327 (5%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
            GR   A  LF  I  P T  WN II     N L  +A++LY  M       + D +T+ 
Sbjct: 72  HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG--IAADKFTFP 129

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            V+KAC    ++ +GK VH   I+   +   FV N+L++ Y  C  +  A  V  K    
Sbjct: 130 FVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR 189

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           +   +  V              ++FD +  +NVV+W  +++ Y++ ++  EA+  F+ M 
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
              I P+  + V++  A + +G       ++   +K   E    +++ ++ I MY++ G 
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI--GVYLGTALIDMYSKCGS 307

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              A ++F+    ++   WN+MI     +    EA+ LF + +E   +  D +TF+  L 
Sbjct: 308 IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE-MERVNVKPDAITFIGVLC 366

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPV 365
           A   ++ +  G      + +++   P+
Sbjct: 367 ACVHIKNVKEGCAYFTRMTQHYGIAPI 393



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G+P +++++FD +     + WN++I  +  + L  EA+ ++  M +       +  T S+
Sbjct: 1300 GQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVG-VRYNAVTLSA 1358

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VL ACA    LR GK +H   I+     +  V  S+++MY  C                 
Sbjct: 1359 VLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC----------------- 1401

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              + ++  K FD M+ +NV +W  +V+ Y    R  EA+  F  M+R G++P+ I+FV+V
Sbjct: 1402 -GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSV 1460

Query: 233  FPALSSLG 240
              A S  G
Sbjct: 1461 LAACSHAG 1468


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 192/632 (30%), Positives = 337/632 (53%), Gaps = 38/632 (6%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M R+NVVAW +++S Y +  R   A+  F  M+  G+ P+  +      A + LG  ++ 
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
           + V+ L V+ G  +  D ++ S  I MY+  G    A+++FD     +   + ++I  + 
Sbjct: 61  EQVHSLAVRAG--FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFC 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF----- 360
           +N     A E  +Q+L+   +  ++ T  + L+A  ++    LGQQ+H Y+IK       
Sbjct: 119 RNGEFELAAEALIQMLK-QGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQ 173

Query: 361 -----------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                              L   V +++  ++VVSW +M+  ++++G  +E L +  +M 
Sbjct: 174 SVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMI 233

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
            +G   +   ++ +L A  ++    +G+Q H   ++H +  +  + + L+ MY ++GL++
Sbjct: 234 SEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVE 290

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
               +  K +  + D  +W   I+   QNG  E+A     QM     TPN    +SVL +
Sbjct: 291 ELEAMLNKIE--NPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSS 348

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  + +++ G Q H  +++   D  +  G +LI+MYSK G +  A   F  +   +  ++
Sbjct: 349 CADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSW 408

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
            ++I G+ QHG + +AL +F  M+  GI+PD  TF+ VL  C+++G+V+EG   F LM  
Sbjct: 409 NSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMID 468

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +Y   P+  HY C+ DMLGR G+  EA   + ++  E + L IW +LL SC+LH + ++ 
Sbjct: 469 QYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL-IWKTLLASCKLHRNLDIG 527

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           ++ A +L+E+  R+S    +VL+SNIYA  G WE+  KVR+ M E G++K+ GCSWI++ 
Sbjct: 528 KLAADRLMELSDRDS--ASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEIN 585

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
             V+ FAS+D  HP S  IY+ML  L   M++
Sbjct: 586 NEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 617



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 147/613 (23%), Positives = 271/613 (44%), Gaps = 99/613 (16%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           + R   V W +++ G+  N  P  A+ +++ M +S    + +++  ++ L ACA+   LR
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESG--VAPNDFACNAALVACADLGALR 58

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
            G+ VH   +R       ++ + L+ MYS C S   A+                  +VFD
Sbjct: 59  AGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK------------------EVFD 100

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M   +VV + +++S + +   +  A      ML+ G++P+  +   +  A   +     
Sbjct: 101 RMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----L 156

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              ++G L+K        ++ +++ I  Y+  G F  A+ +FD+   +N   W +M+  Y
Sbjct: 157 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 216

Query: 305 VQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           +++    EA+++F  ++   +D   F     L A  ++       LG+QLH   IK+ + 
Sbjct: 217 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG------LGRQLHCSAIKHDLI 270

Query: 363 LPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             + V NA++                      D+VSW T ISA  QNG  ++ + L+ +M
Sbjct: 271 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 330

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
             +GF  +    +++LS+ +++ + D G Q H   L+ G   E    + LI+MY+K G +
Sbjct: 331 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 390

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
            +AR  F+   +   D  +WN++I G+ Q+G   +A   F +M  + + P+  T   VL 
Sbjct: 391 GSARLAFDVMHT--HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 448

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMYSKSG-------VIN---- 565
            CN  G +E G+       R ++DQ  F         +IDM  ++G       +IN    
Sbjct: 449 GCNHSGMVEEGELF----FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 504

Query: 566 ------------------------YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                                    AA+   ++ +++S +Y  M   Y  HG  E A  +
Sbjct: 505 EPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKV 564

Query: 602 FRSMKGCGIEPDA 614
            R M   G++ DA
Sbjct: 565 RRRMDETGVKKDA 577



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/450 (22%), Positives = 190/450 (42%), Gaps = 42/450 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           QIH        L++ ++ S  + I    + G   LA+ +FDS+     V W +++  ++ 
Sbjct: 159 QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIR 218

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +    EA+ ++  M   S     + +  S VL AC    ++ +G+ +HC  I+       
Sbjct: 219 DGRLEEALQVFGDM--ISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDI 273

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V N+LL+MY    + L  E+  +                 + +   ++V+W T +S   
Sbjct: 274 RVSNALLSMYGR--TGLVEELEAM----------------LNKIENPDLVSWTTAISANF 315

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     +A+     M   G  P+  +F +V  + + +         + L +KLG +  ++
Sbjct: 316 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCD--SE 373

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +   ++ I MY++ G    AR  FD     +   WN++I G+ Q+    +A+E+F + + 
Sbjct: 374 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSK-MR 432

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTM 382
            + I  DD TFL  L   +    ++ G+     +I  +   P              +  M
Sbjct: 433 SNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA----------PSHYACM 482

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I    +NG  DE L ++ +M    F  D++    LL++    RN D+GK     L+    
Sbjct: 483 IDMLGRNGRFDEALRMINDMP---FEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSD 539

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKND 472
                   + ++YA  G  + AR++  + D
Sbjct: 540 RDSASYVLMSNIYAMHGEWEDARKVRRRMD 569


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 223/809 (27%), Positives = 407/809 (50%), Gaps = 73/809 (9%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           +R+ ++ + GR   AR++FD++     + WN++I  +  + +  +A +L+  +   +  T
Sbjct: 38  ARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRT 97

Query: 104 SCDNYTYSSVLKACAETRNLRIG----------KAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           +    +  + L    + R +  G            V C+        +R ++++   M S
Sbjct: 98  ATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDA---MPS 154

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
             ++S ++ + G  +       ++L    F  M +RN+V W  ++S YV+ E++ +    
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNL----FKQMPQRNLVTWTVMISGYVRIEQHGKGWDI 210

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           FRMM   G  P   +F +V  A++ L D    +V+  L++K G E  +D+ + +S + +Y
Sbjct: 211 FRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFE--SDVVIGTSILNVY 268

Query: 274 A-ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
             +    D A K FD  +ERN   W+TMI           AI ++ +  +  + +     
Sbjct: 269 TRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR--DPVKSIPSQTA 326

Query: 333 FLSALSAVSQLQELD-LGQQLHAYIIKNFVALPVIVL-NAVIE-----------RDVVSW 379
            L+ L+   ++ E   L +Q+   I+ ++ A+    + N +++           R+ +SW
Sbjct: 327 LLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISW 386

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             MI+ + QNG  +E L L+  + + G +    ++T+   A S++   + G+Q H+  ++
Sbjct: 387 AGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVK 446

Query: 440 HGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE--- 495
            G  F   + + LI MY K   ++  RQ+F  N    +D  +WN+ IA   QN +LE   
Sbjct: 447 AGCQFNSYVCNALISMYGKCRNMEYVRQVF--NRMRVKDTVSWNSFIAALVQNNMLEDAR 504

Query: 496 ----------------------------EAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
                                       EA   F+ ML  +  PN   +  +L  C  +G
Sbjct: 505 HIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLG 564

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           + +LG+Q+H  +I++ +D  + V  +L+ MY K G  + +  VF  + E++  T+ T I 
Sbjct: 565 SAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFIT 623

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           G  QHG+   A+ ++  M+  G+ P+ +TFV +L+ACS+AGLVDEG Q F  M ++Y + 
Sbjct: 624 GCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLT 683

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P  EHY C+ D+LGR G V  A +F+ ++  E + + IW +LLG+C++H ++E+    A+
Sbjct: 684 PLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTV-IWSALLGACKIHKNAEIGRRAAE 742

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
           KL   +  N+  G +V+LSNIY+  G W  V ++RK M++RG+ KE GCSW+ +   V+ 
Sbjct: 743 KLFTTEPSNA--GNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHS 800

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F + D++H +  +I   L+ L   +R  G
Sbjct: 801 FVTGDKQHEKIEEIDYTLQDLYTLLRGTG 829



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 163/709 (22%), Positives = 273/709 (38%), Gaps = 132/709 (18%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  S ++  C   +   A  LF  + +   V W  +I G+V      + 
Sbjct: 148 LFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKG 207

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
             ++  M       S D   ++SVL A    ++L + + +    ++        +  S+L
Sbjct: 208 WDIFRMMHHEG--ASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSIL 265

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           N+Y+                  D S  D+  K FD M  RN   W+T+++      R   
Sbjct: 266 NVYTR-----------------DASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308

Query: 210 AVRQFRMMLRMGIRP--STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           A+  +      G  P  S  S   +   L+  G    A +++        E + D  V S
Sbjct: 309 AIAVY------GRDPVKSIPSQTALLTGLARCGRITEARILF--------EQIPDPIVVS 354

Query: 268 --SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
             + I  Y + G  D A+++FD    RNT  W  MI GY QN    EA++L +Q L  + 
Sbjct: 355 WNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDL-LQALHRNG 413

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------- 372
           ++    +  S+  A S +  L+ G+Q+H+  +K        V NA+I             
Sbjct: 414 MLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVR 473

Query: 373 --------------------------------------ERDVVSWNTMISAFVQNGLDDE 394
                                                  RDVVSW T+ISA+ Q    DE
Sbjct: 474 QVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDE 533

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
            +     M  +    +S  +T LLS    L +  +G+Q H   ++HG+  E +  + L+ 
Sbjct: 534 AVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMS 593

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G   +  ++F+  +  +RD  TWN  I G  Q+GL  EA   +  M    V PN 
Sbjct: 594 MYFKCGCADS-HKVFDSME--ERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNE 650

Query: 514 VTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT   +L AC+  G ++ G Q     S  Y L   +     ++D+  ++G +  A     
Sbjct: 651 VTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIY 710

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            +P                                  IEPD + + A+L AC      + 
Sbjct: 711 DMP----------------------------------IEPDTVIWSALLGACKIHKNAEI 736

Query: 633 GLQIFDLMQQEYKIQPSTE-HYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           G +     ++ +  +PS   +Y  ++++   +G  VE  E  K + + G
Sbjct: 737 GRRA---AEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRG 782



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 165/403 (40%), Gaps = 90/403 (22%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           S+ I   A LG    AR++FD    R+   WN+MI  Y  +            +LE   I
Sbjct: 37  SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSG-----------MLEDARI 85

Query: 327 VFDDVTFLSALSAVSQLQEL-DLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
           +FD ++  +  +A   L     LG+ L A  +  F  +P        ER+ V+WN M+S 
Sbjct: 86  LFDAISGGNVRTATILLSGYARLGRVLDARRV--FDGMP--------ERNTVAWNAMVSC 135

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +VQNG                   D      L  A   + ++DV                
Sbjct: 136 YVQNG-------------------DITMARRLFDA---MPSRDVTSW------------- 160

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
              + ++  Y  S  +  A  +F++     R+  TW  MI+GY +     + +  FR M 
Sbjct: 161 ---NSMVTGYCHSRQMVDAWNLFKQMPQ--RNLVTWTVMISGYVRIEQHGKGWDIFRMMH 215

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK-SGVI 564
               +P+    ASVL A   + ++ + + L    ++   + +V +GTS++++Y++ +  +
Sbjct: 216 HEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASAL 275

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL---------------SLFRSMKGCG 609
           + A   F  + E+N  T++TMI      G  + A+               +L   +  CG
Sbjct: 276 DIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCG 335

Query: 610 I------------EPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
                        +P  +++ A+++     G+VDE  ++FD M
Sbjct: 336 RITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRM 378


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 235/769 (30%), Positives = 399/769 (51%), Gaps = 52/769 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLK 115
            AR +FD I    ++ WN+II  +        A  L+S M+K     S   + YT+ S++ 
Sbjct: 702  ARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT 761

Query: 116  ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            A   + +  +     C   +  +   +  +   L + S  +S         ++   D +K
Sbjct: 762  AACSSVDFGL-----CVLEQMLARVEKSGFLQDLYVGSALVSGF------ARFGLTDDAK 810

Query: 176  YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP-STISFVNVF 233
                  +F+ M  RNVV+ N ++   VK ++   A + F  M  + GI   S +  ++ F
Sbjct: 811  -----NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAF 865

Query: 234  PALSSLGD-YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               S L +  +    V+  +++ G    N + + +  + MYA+ G    A  +F+  +E+
Sbjct: 866  SEFSVLEEGRRKGREVHAHVIRTGLN-DNKVAIGNGLVNMYAKSGAIADACSVFELMVEK 924

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            ++  WN++I G  QN    +A E F+++     +   + T +S LS+ + L  + LG+Q+
Sbjct: 925  DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMP-SNFTLISTLSSCASLGWIMLGEQI 983

Query: 353  HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
            H   +K  +   V V NA++                    E D VSWN++I A   +   
Sbjct: 984  HCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEAS 1043

Query: 393  -DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
              + +    EM + G+ +  VT   +LSA S+L   +V  Q HA +L++ +  +  + + 
Sbjct: 1044 VSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 1103

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            L+  Y K G +    +IF +  S  RD+ +WN+MI+GY  N LL +A      M++    
Sbjct: 1104 LLSCYGKCGEMNECEKIFARM-SETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQR 1162

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             +  T A+VL AC  +  +E G ++H   IR  ++ +V VG++L+DMYSK G I+YA+  
Sbjct: 1163 LDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRF 1222

Query: 571  FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT-FVAVLSACSYAGL 629
            F  +P +N  ++ +MI GY +HG  E+AL LF  M   G  PD +   + VLSACS+ G 
Sbjct: 1223 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGF 1282

Query: 630  VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            V+EG + F  M + Y++ P  EH+ C+ D+LGR GK+ E  +F+  +  + NVL IW ++
Sbjct: 1283 VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVL-IWRTV 1341

Query: 690  LGS-CRLHG-HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
            LG+ CR +G ++EL    A+ LLE++ +N++   +VLL+N+YA    WE+V K R  M+E
Sbjct: 1342 LGACCRANGRNTELGRRAAEMLLELEPQNAVN--YVLLANMYASGEKWEDVAKARXAMKE 1399

Query: 748  RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              ++KE GCSW+ +   V+ F + D+ HP+   IY+ L  L  +MR+AG
Sbjct: 1400 AAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAG 1448



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 184/701 (26%), Positives = 327/701 (46%), Gaps = 75/701 (10%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A++LFD ++    V W  +I G+  N  P EA   +  M ++      ++Y + S L+AC
Sbjct: 598  AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIP--NHYAFGSALRAC 655

Query: 118  AET--RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL-DAEMVGLKYVEVDYS 174
             E+     ++G  +H    +        V N L++MY +CL S  DA             
Sbjct: 656  QESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDAR------------ 703

Query: 175  KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI----RPSTISFV 230
                   VFD +  RN ++WN+I+S Y +    V A   F  M + G+    +P+  +F 
Sbjct: 704  ------SVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFG 757

Query: 231  NVFPALSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++  A  S  D+    V+  +L ++  S ++ DL+V S+ +  +A  G  D A+ IF+  
Sbjct: 758  SLITAACSSVDFGLC-VLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQLQE-LD 347
              RN    N ++ G V+      A ++F ++ +L  I  D  V  LSA S  S L+E   
Sbjct: 817  GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRR 876

Query: 348  LGQQLHAYIIK-----NFVAL----------------PVIVLNAVIERDVVSWNTMISAF 386
             G+++HA++I+     N VA+                   V   ++E+D VSWN++IS  
Sbjct: 877  KGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGL 936

Query: 387  VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
             QN   ++       M++ G M  + T+ + LS+ ++L    +G+Q H   L+ G+  + 
Sbjct: 937  DQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDV 996

Query: 446  GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN-GLLEEAFVAFRQM 504
             + + L+ +YA++G      ++F      + DQ +WN++I   + +   + +A   F +M
Sbjct: 997  SVSNALLALYAETGCFTECLKVFSL--MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEM 1054

Query: 505  LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
            +      + VT  ++L A + +   E+  Q+H   ++Y L  +  +G +L+  Y K G +
Sbjct: 1055 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 1114

Query: 565  NYAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
            N    +FA++ E ++ V++ +MI GY  + +  +A+ L   M   G   D+ TF  VLSA
Sbjct: 1115 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSA 1174

Query: 624  CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEE 679
            C+    ++ G+++         I+   E    V     DM  + G++  A  F  EL   
Sbjct: 1175 CASVATLERGMEV-----HACGIRACMESDVVVGSALVDMYSKCGRIDYASRFF-ELMPL 1228

Query: 680  GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
             NV   W S++     HGH E       K L++ TR  + G
Sbjct: 1229 RNVYS-WNSMISGYARHGHGE-------KALKLFTRMMLDG 1261



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 196/415 (47%), Gaps = 43/415 (10%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +V +LF++++ I +Y  +G    A+K+FD    RN   W  +I GY QN  P EA   F 
Sbjct: 575 FVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFR 634

Query: 319 QVLELDEIVFDDVTFLSALSAV--SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--- 373
            ++     + +   F SAL A   S      LG Q+H  I K      V+V N +I    
Sbjct: 635 DMVRAG-FIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 693

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG----FMIDS 411
                             R+ +SWN++IS + + G       L   MQK+G    F  + 
Sbjct: 694 SCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNE 753

Query: 412 VTVTALLSAASNLRNQDVG----KQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQ 466
            T  +L++AA +  + D G    +Q  A + + G +    + S L+  +A+ GL   A+ 
Sbjct: 754 YTFGSLITAACS--SVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKN 811

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           IFE+   G R+  + N ++ G  +    E A   F +M +  V  N  +   +L A +  
Sbjct: 812 IFEQ--MGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEF 868

Query: 527 GNIE----LGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
             +E     G+++H   IR  L+ N V +G  L++MY+KSG I  A +VF  + EK+SV+
Sbjct: 869 SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS 928

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           + ++I G  Q+  SE A   F  M+  G  P   T ++ LS+C+  G +  G QI
Sbjct: 929 WNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 983



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E  ++LH  SI+Y    N+F+  +LI++Y + G +  A  +F ++  +N VT+  +I GY
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGY 620

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL--VDEGLQIFDLMQQ 642
            Q+G  + A + FR M   G  P+   F + L AC  +G      G+QI  L+ +
Sbjct: 621 TQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 226/761 (29%), Positives = 388/761 (50%), Gaps = 51/761 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPY-EAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  LFD +     V W++++  +    L Y E  LLY    + +     + Y  +S+++A
Sbjct: 94  AGTLFDKMPNRNLVSWSSVVSMY--TQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRA 151

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C +      G  VH + I+       +V  SL+ +Y+             K+ E+D ++ 
Sbjct: 152 CVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYA-------------KHGEIDKARL 198

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                VFD +  +  V W  I++ Y K+ R   +++ F +M+   + P      ++  A 
Sbjct: 199 -----VFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNAC 253

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S LG  K    ++  +++  SE   D+   +  I  Y + G     + +FD    +N   
Sbjct: 254 SVLGYLKGGKQIHAYVLR--SETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIIS 311

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W TMI GY+QN++  EA+EL  ++  +     D+    S L++   +  L  G+Q+H+Y+
Sbjct: 312 WTTMIAGYMQNSYDWEAVELVGEMFRMGWKP-DEYACSSVLTSCGSVDALQHGRQIHSYV 370

Query: 357 IK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           IK      NFV   +I              V + V    VV +N MI  + + G     L
Sbjct: 371 IKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGAL 430

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMY 455
            +  EM+ +      +T  +LL  ++ L    + KQ H  ++++G   +    S LID+Y
Sbjct: 431 EVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVY 490

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           +K   I+ AR +FE   + ++D   WN++ +GY      EEAF  +  +      PN  T
Sbjct: 491 SKCSCIRDARYVFE--GTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFT 548

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            A++  A + + ++  G+Q H   ++  L+ + F+  +L+DMY+K G +  A  +F+   
Sbjct: 549 FAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSV 608

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K++  + +MI  Y QHG  E AL +F +M    I P+ +TFV+VLSACS+ G V++GLQ
Sbjct: 609 WKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQ 668

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            ++ M + Y I+P  EHY  V  +LGR G++ EA EF++++      L +W SLL +CR+
Sbjct: 669 HYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAAL-VWRSLLSACRV 726

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            G+ ELA+  A+  + +D  +S  G +V+LSNI+A +G W +V ++R +M   G+ KE G
Sbjct: 727 FGNVELAKHAAEMAISIDPMDS--GSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPG 784

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            SWI+V G V+ F S+D+ H ++  IY  L+ L  +M++ G
Sbjct: 785 QSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVG 825



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 263/545 (48%), Gaps = 46/545 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    AR +FD +   T V W  II G+  +     ++ L++ M +S+     D Y  
Sbjct: 189 KHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIP--DKYVL 246

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS+L AC+    L+ GK +H + +R  +      YN L++ Y+ C               
Sbjct: 247 SSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKC--------------- 291

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
               +      +FD +  +N+++W T+++ Y++     EAV     M RMG +P   +  
Sbjct: 292 ---GRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACS 348

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  +  S+   +    ++  ++K+  E+  D FV ++ I MY++    D A+++FD   
Sbjct: 349 SVLTSCGSVDALQHGRQIHSYVIKVCLEH--DNFVTNALIDMYSKCNALDDAKRVFDVVT 406

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +   +N MI GY +  +   A+E+F Q + L  +    +TF+S L   + L  L L +
Sbjct: 407 CHSVVYYNAMIEGYSRQGYLCGALEVF-QEMRLKHVSPSFLTFVSLLGLSAALLCLQLSK 465

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H  IIK   +L     +A+I+                    +D+V WN++ S +    
Sbjct: 466 QIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQL 525

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
             +E   L  ++Q      +  T  AL +AAS L +   G+Q H  +++ G+  +  + +
Sbjct: 526 KSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN 585

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMYAK G ++ A +IF  + S  +D A WN+MI+ Y Q+G +EEA   F  M+ +N+
Sbjct: 586 ALVDMYAKCGSVEEAEKIF--SSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNI 643

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN VT  SVL AC+ +G +E G Q +    RY ++  +    S++ +  ++G +  A  
Sbjct: 644 NPNYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEARE 703

Query: 570 VFAKI 574
              K+
Sbjct: 704 FIEKM 708



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 25/392 (6%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+  +V  G +Y  D+F+++  +  Y ++G    A  +FD    RN   W++++  Y Q 
Sbjct: 62  VHCQVVLWGLQY--DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FV 361
            +  +A+  F++         ++    S + A  Q    + G Q+H+Y+IK+      +V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 362 ALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
              ++VL A              ++ +  V+W  +I+ + ++G  +  L L   M +   
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
           + D   ++++L+A S L     GKQ HAY+LR     +    + LID Y K G +K  + 
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKA 299

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F++ D   ++  +W  MIAGY QN    EA     +M      P+    +SVL +C  +
Sbjct: 300 LFDRLDV--KNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV 357

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             ++ G+Q+H + I+  L+ + FV  +LIDMYSK   ++ A  VF  +   + V Y  MI
Sbjct: 358 DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMI 417

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            GY + G    AL +F+ M+   + P  +TFV
Sbjct: 418 EGYSRQGYLCGALEVFQEMRLKHVSPSFLTFV 449



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 1/119 (0%)

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            NV      +A++L A     +I   +++H   + + L  +VF+   L+  Y K G +  
Sbjct: 34  QNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFD 93

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSAC 624
           A  +F K+P +N V++++++  Y Q G +E+AL  F    + C  + +     +++ AC
Sbjct: 94  AGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRAC 152


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/535 (36%), Positives = 311/535 (58%), Gaps = 43/535 (8%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH--- 353
           WN++I  + ++   ++A+  F  + +L  +  +  TF   + + S L +L  G+Q+H   
Sbjct: 54  WNSIIADFARSGDSLQALYAFSSMRKL-SLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQA 112

Query: 354 ---AYIIKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
               Y    FVA  +I              + + + ER+VVSW +MIS +VQN    E +
Sbjct: 113 FVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAV 172

Query: 397 MLVYE-----------MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            L  E           +   G  +DSV +  ++SA + +  + V +  H   ++ G  FE
Sbjct: 173 FLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG--FE 230

Query: 446 G---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           G   + + L+D YAK G I  +R++F+  +  + D  +WN++IA Y QNGL  EAF  F 
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGME--ETDVCSWNSLIAVYAQNGLSVEAFSLFS 288

Query: 503 QMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            M++   V  N VT+++VL AC   G +++GK +H   ++  L+ N+ VGTS++DMY K 
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +  A   F ++  KN  ++T M+ GYG HG  + A+ +F  M  CGI+P+ ITFV+VL
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVL 408

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           +ACS+AGL+ EG   F+ M+ E+ ++P  EHY C+ D+LGR G + EAY  ++E+  + +
Sbjct: 409 AACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPD 468

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            + +WGSLLG+CR+H + EL E+ A+KL ++D  N   GY+VLLSNIYA+ G W++V+++
Sbjct: 469 FI-VWGSLLGACRIHKNVELGEISARKLFKLDPSNC--GYYVLLSNIYADAGRWDDVERM 525

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           R  M+  GL K  G S ++  G V+ F   D+EHPQ  KIYE L+ L ++++  G
Sbjct: 526 RILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVG 580



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 241/501 (48%), Gaps = 78/501 (15%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + +V +WN+I++ + ++   ++A+  F  M ++ + P+  +F     + SSL D  +   
Sbjct: 48  KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++      G  Y +D+FVAS+ I MY++ G  + ARK+FD   ERN   W +MI GYVQN
Sbjct: 108 IHQQAFVFG--YGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFL----------SALSAVSQLQELDLGQQLHAYII 357
               EA+ LF + L +DE  +D++  +            +SA +++    + + +H   +
Sbjct: 166 ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAV 225

Query: 358 KNF--------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K                      +++   V + + E DV SWN++I+ + QNGL  E   
Sbjct: 226 KKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFS 285

Query: 398 LVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLID 453
           L  +M K+G    ++VT++A+L A ++     +GK  H  +++  +  E    + + ++D
Sbjct: 286 LFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK--MELEDNLVVGTSIVD 343

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G ++ AR+ F++     ++  +W  M+AGY  +G  +EA   F +M+   + PN 
Sbjct: 344 MYCKCGRVEMARKAFDRLKR--KNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNY 401

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +T  SVL AC+  G ++ G   H F+                 M  +  V          
Sbjct: 402 ITFVSVLAACSHAGLLKEG--WHWFN----------------KMKCEFDV---------- 433

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
             E     Y+ M+   G+ G  + A  L + MK   ++PD I + ++L AC     + + 
Sbjct: 434 --EPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK---VKPDFIVWGSLLGACR----IHKN 484

Query: 634 LQIFDLMQQE-YKIQPSTEHY 653
           +++ ++  ++ +K+ PS   Y
Sbjct: 485 VELGEISARKLFKLDPSNCGY 505



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 224/508 (44%), Gaps = 90/508 (17%)

Query: 59  RQLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           R +F      T+V  WN+II  F  +    +A+  +S M+K S +   +  T+   +K+C
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHP--NRSTFPCTIKSC 96

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   +L  GK +H            FV ++L++MYS C    DA                
Sbjct: 97  SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR--------------- 141

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-----------IRPST 226
              K+FD +  RNVV+W +++S YV+ ER  EAV  F+  L +            +   +
Sbjct: 142 ---KLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDS 198

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           +    V  A + +      + V+GL VK G E    L V ++ +  YA+ G    +RK+F
Sbjct: 199 VLLGCVISACARVCVKSVTECVHGLAVKKGFE--GCLAVGNTLMDAYAKCGEISVSRKVF 256

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   E +   WN++I  Y QN   VEA  LF  +++  E+ ++ VT  + L A +    L
Sbjct: 257 DGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGAL 316

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
            +G+ +H  ++K  +   ++V  ++++                    ++V SW  M++ +
Sbjct: 317 QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY 376

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FE 445
             +G   E + + YEM + G   + +T  ++L+A S           HA LL+ G H F 
Sbjct: 377 GMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS-----------HAGLLKEGWHWFN 425

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            M+    +   + G+                    ++ M+    + G L+EA+   ++M 
Sbjct: 426 KMKC---EFDVEPGI------------------EHYSCMVDLLGRAGYLKEAYGLIQEM- 463

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGK 533
              V P+ +   S+L AC    N+ELG+
Sbjct: 464 --KVKPDFIVWGSLLGACRIHKNVELGE 489



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 182/412 (44%), Gaps = 44/412 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ--MKKSSPYTSC-------DNY 108
           AR+LFD I     V W ++I G+V N    EA+ L+ +  +   + Y          D+ 
Sbjct: 140 ARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSV 199

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
               V+ ACA      + + VH   ++        V N+L++ Y+ C             
Sbjct: 200 LLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC------------- 246

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTI 227
            E+  S+     KVFD M   +V +WN++++ Y +    VEA   F  M++ G +R + +
Sbjct: 247 GEISVSR-----KVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAV 301

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +   V  A +  G  +    ++  +VK+  E  ++L V +S + MY + G  + ARK FD
Sbjct: 302 TLSAVLLACAHSGALQIGKCIHDQVVKM--ELEDNLVVGTSIVDMYCKCGRVEMARKAFD 359

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               +N + W  M+ GY  + H  EA+++F +++    I  + +TF+S L+A S    L 
Sbjct: 360 RLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG-IKPNYITFVSVLAACSHAGLLK 418

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            G      +   F           +E  +  ++ M+    + G   E   L+ EM+ +  
Sbjct: 419 EGWHWFNKMKCEF----------DVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKP- 467

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             D +   +LL A    +N ++G+ +   L +      G    L ++YA +G
Sbjct: 468 --DFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 19/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   ++R++FD +       WN++I  +  N L  EA  L+S M K       +  T S+
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRY-NAVTLSA 305

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA +  L+IGK +H   ++     +  V  S+++MY  C                 
Sbjct: 306 VLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC----------------- 348

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + ++  K FD ++R+NV +W  +V+ Y       EA++ F  M+R GI+P+ I+FV+V
Sbjct: 349 -GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSV 407

Query: 233 FPALSSLG 240
             A S  G
Sbjct: 408 LAACSHAG 415


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 185/525 (35%), Positives = 304/525 (57%), Gaps = 29/525 (5%)

Query: 293 NTEVWNTMIGGY-VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           N  ++N +I G    NN  +E + ++ Q+L    IV D+ T    L A ++ + +  G++
Sbjct: 88  NLPLYNAIIRGLATSNNDSIEGLVVYKQMLS-KGIVPDNYTIPFVLKACAESRAVREGEE 146

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +H   IK  +A  V V N ++                    +RD+VSW TMI  +V+ G 
Sbjct: 147 VHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGF 206

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFE-GMES 449
             EG+ L +EM  +    D +T+  +LS+ + L +  +G++ H Y++R+  ++ +  + +
Sbjct: 207 AREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGN 266

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+DMY K G    AR++F++     ++  +WN+MI+G  Q G  +E+   FR+M    V
Sbjct: 267 ALVDMYLKCGDANFARKVFQEMPV--KNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV 324

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ VT+ +VL +C  +G +ELGK +H +  R  +  + F+G +L+DMY+K G I+ A  
Sbjct: 325 KPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACW 384

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  +  K+  +YT MI+G   HG   +AL LF  M   GIEPD +TFV VL+ACS+ GL
Sbjct: 385 VFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V+EG + F+ M   Y ++P  EHY C+ D+LGR G + EA EF++ +  E +   + G+L
Sbjct: 445 VEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAF-VLGAL 503

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           LG+C++HG  EL E V KK+ +++ R    G +VL+SNIY+    W +  K+RK M+ER 
Sbjct: 504 LGACKIHGKVELGESVMKKIEKIEPRKD--GAYVLMSNIYSSANRWRDALKLRKTMKERN 561

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           L K  GCS I++ G ++ F   D+ HP+  +IY++L+ +   ++N
Sbjct: 562 LEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 606



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 244/541 (45%), Gaps = 88/541 (16%)

Query: 24  LPQIHSLSPPIPKLKTP----TIRSRLSKICQEG---RPHLARQLFDSITRPTTVIWNTI 76
           L QIH+    I  + +P    TI +RLS +C +     P  A  L   +  P   ++N I
Sbjct: 38  LKQIHA--SIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAI 95

Query: 77  IIGFVC-NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           I G    NN   E +++Y QM   S     DNYT   VLKACAE+R +R G+ VH   I+
Sbjct: 96  IRGLATSNNDSIEGLVVYKQM--LSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIK 153

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
                  +V N+L+ MY+ C     A                   KVFDT  +R++V+W 
Sbjct: 154 MGLASDVYVSNTLMRMYAVCDVIRSAR------------------KVFDTSPQRDLVSWT 195

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
           T++  YVK     E V  F  M    ++   ++ V V  + + LGD +    ++  +++ 
Sbjct: 196 TMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR- 254

Query: 256 GSEYVN-DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            +  VN D+FV ++ + MY + G  +FARK+F     +N   WN+MI G  Q     E++
Sbjct: 255 -NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
            +F ++  L  +  DDVT ++ L++ + L  L+LG+ +HAY+ +N +     + NA+++ 
Sbjct: 314 YMFRKMQRLG-VKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372

Query: 374 -------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                              +DV S+  MI     +G   + L L  EM K G   D VT 
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 432

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSG 474
             +L+A S++   + G++          +FE M +           I   R   E     
Sbjct: 433 VGVLTACSHVGLVEEGRK----------YFEDMST-----------IYNLRPQLEH---- 467

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
                 +  M+    + GL+ EA    R M    + P+   + ++L AC   G +ELG+ 
Sbjct: 468 ------YGCMVDLLGRAGLINEAEEFIRNM---PIEPDAFVLGALLGACKIHGKVELGES 518

Query: 535 L 535
           +
Sbjct: 519 V 519


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 189/521 (36%), Positives = 296/521 (56%), Gaps = 26/521 (4%)

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL------- 352
           MI G+V+N+   ++I +F  ++  +   FD  T ++ L AV++LQEL LG Q+       
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 353 ----HAYIIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
               H  ++   ++L           ++   + ++D++S N MIS F  NG  ++ + L 
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKS 458
            E+   G  + S T+  L+   S   +  +    H + ++ GI     + + L  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             +  ARQ+F+  +S ++  A+WNAMI+G TQNGL + A   F+ M ++NV PN VT+ S
Sbjct: 181 NEMIFARQLFD--ESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L AC  +G + LG+ +H        + NV+V T+LIDMY+K G I  A  +F  +PEKN
Sbjct: 239 ILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKN 298

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            VT+  MI GYG HG  + AL LF  M    ++P  +TF++VL ACS+AGLV EG  IF 
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M  ++  +P  EHY C+ D+LGR G++ +A EF+K +  E     +WG+LLG+C +H  
Sbjct: 359 TMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGP-PVWGALLGACMIHKD 417

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           + LA V ++KL E+D  N   GY+VL+SNIY+ E  +     VR+  +++ L K  GC+ 
Sbjct: 418 TNLAHVASEKLFELDPEN--IGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTL 475

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
           I++G   + F S DQ HPQS  IY  L++L  +M  AG +T
Sbjct: 476 IEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQT 516



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 204/454 (44%), Gaps = 47/454 (10%)

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +I GFV N+   ++I ++  M   +     D  T  +VL A AE + L++G  + C  I+
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNG-PRFDLTTVIAVLPAVAELQELKLGMQILCLAIK 59

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWN 195
           C       +   L++++S C              EV+ ++      +F  +R++++++ N
Sbjct: 60  CGFYSHVSLLTGLISLFSKC-------------GEVEIARL-----LFGEIRKKDLISCN 101

Query: 196 TIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL 255
            ++S +       ++VR F+ +L  G R S+ + V + P  S  G     + ++G  VKL
Sbjct: 102 AMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKL 161

Query: 256 GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIE 315
           G   V+   V+++   +Y  L    FAR++FD   E+    WN MI G  QN     AI 
Sbjct: 162 G--IVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAIS 219

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--- 372
           LF Q ++ + +  + VT  S LSA +Q+  L LG+ +H+ I  N     V V  A+I   
Sbjct: 220 LF-QTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMY 278

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                            E++ V+WN MIS +  +G   E L L Y+M         +T  
Sbjct: 279 AKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFL 338

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LIDMYAKSGLIKTARQIFEKND 472
           ++L A S+      G     + + H   FE +  +   ++D+  ++G +K A + F K  
Sbjct: 339 SVLYACSHAGLVKEGDGIF-HTMVHDFGFEPLAEHYACMVDILGRAGQLKKALE-FIKAM 396

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             +     W A++     +     A VA  ++ E
Sbjct: 397 PVEPGPPVWGALLGACMIHKDTNLAHVASEKLFE 430



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 140/313 (44%), Gaps = 23/313 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   +AR LF  I +   +  N +I GF CN    +++ L+ ++  S    S      SS
Sbjct: 80  GEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS------SS 133

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +       +   G +  C+ I  F      V +S ++   T +     EM+  +     
Sbjct: 134 TIVGLIPVYS-PFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFAR----- 187

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++FD    + + +WN ++S   +      A+  F+ M +  + P+ ++  ++
Sbjct: 188 --------QLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + +G     + V+ L+    + + ++++V+++ I MYA+ G    AR++FD   E+
Sbjct: 240 LSACAQIGALSLGEWVHSLIKS--NRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN MI GY  + H  EA++LF  +L    +    +TFLS L A S    +  G  +
Sbjct: 298 NEVTWNAMISGYGLHGHGQEALKLFYDMLS-SSVKPTGLTFLSVLYACSHAGLVKEGDGI 356

Query: 353 HAYIIKNFVALPV 365
              ++ +F   P+
Sbjct: 357 FHTMVHDFGFEPL 369



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 21/228 (9%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           IH     +  +   ++ + L+ + C+      ARQLFD     T   WN +I G   N L
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGL 213

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
              AI L+  M+K++   + +  T +S+L ACA+   L +G+ VH          + +V 
Sbjct: 214 TDAAISLFQTMQKNN--VNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVS 271

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            +L++MY+ C S   A                   ++FD M  +N V WN ++S Y    
Sbjct: 272 TALIDMYAKCGSITVAR------------------ELFDLMPEKNEVTWNAMISGYGLHG 313

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
              EA++ F  ML   ++P+ ++F++V  A S  G  K  D ++  +V
Sbjct: 314 HGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMV 361


>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
          Length = 788

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 229/765 (29%), Positives = 381/765 (49%), Gaps = 85/765 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            +A  LF  +       W   IIG  C   L   A++ + +M K   +   DN+   +V 
Sbjct: 80  EIAEVLFSKLRVRNVFSW-AAIIGVKCRMGLVEGALMGFVEMLKDEIFP--DNFVVPNVC 136

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC   +    G+ VH +  +   +   FV +SL +MY  C    DA             
Sbjct: 137 KACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDAR------------ 184

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVFD +  RNVVAWN ++  YV+     EA+R    M   G+ P+ ++      
Sbjct: 185 ------KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLS 238

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++G  +     + L V  G E  N   + +S +  Y ++G  ++A  +FD  + ++ 
Sbjct: 239 ASANMGGVEEGKQSHALAVVNGLELDN--ILGTSVLNFYCKVGLVEYAEMVFDRMVGKDV 296

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ     +AI +  +++ L+++ FD VT  + +S  ++ Q   LG+++  
Sbjct: 297 VTWNLLISGYVQQGLVEDAIRM-CKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQC 355

Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y I++     ++                    V ++ +++D++ WNT+++A+ ++GL  E
Sbjct: 356 YCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGE 415

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L YEMQ +    + +T   ++   S LRN  V +    +L         M+S     
Sbjct: 416 ALRLFYEMQLESVPPNVITWNLII--LSLLRNGQVDEAKKMFL--------QMQS----- 460

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
              SG++ T                +W  M+ G  QNG  EEA    R+M E+ + PNV 
Sbjct: 461 ---SGIVPTI--------------VSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVF 503

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +I   L AC  + ++  G+ +HG+ IR  L   +V + TSL+DMY+K G I+ A  VF +
Sbjct: 504 SITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRR 563

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
                   Y  MI  Y  +G  E A++L+RS+   GI+PD ITF  +LSAC++AG +++ 
Sbjct: 564 KLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQA 623

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           ++IF  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  E +   I  SLL +C
Sbjct: 624 IEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMI-QSLLATC 682

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
                +EL E ++K+LLE +  NS  G +V +SN YA EG+W+ V K+R+ M+ +GL+K+
Sbjct: 683 NKEHKTELVEYLSKQLLESEPDNS--GNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQ 740

Query: 754 VGCSWIDVG----GYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
            GCSWI V       V  F + D+ H ++++I  ML  L  +MR+
Sbjct: 741 PGCSWIRVKREEEEEVQVFVANDKTHLRNNEIRRMLALLLNDMRS 785



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 262/525 (49%), Gaps = 29/525 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D+ +   ++  ++K G  Y  + ++ +  +  YA+    + A  +F     RN   W  +
Sbjct: 41  DFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 100

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++L+ DEI  D+    +   A   LQ    G+ +H Y+ K+ 
Sbjct: 101 IGVKCRMGLVEGALMGFVEMLK-DEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSG 159

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + ER+VV+WN ++  +VQNG+++E + L+ 
Sbjct: 160 LDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMC 219

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+++G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + +++ Y K G
Sbjct: 220 DMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVG 279

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           L++ A  +F++     +D  TWN +I+GY Q GL+E+A    + M    +  + VT++++
Sbjct: 280 LVEYAEMVFDRMVG--KDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTL 337

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           +       N +LGK++  + IR+  + ++ + ++ +DMY+K G I  A  VF    +K+ 
Sbjct: 338 MSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDL 397

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G+S  AL LF  M+   + P+ IT+  ++ +    G VDE  ++F L
Sbjct: 398 ILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMF-L 456

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG---NVLEIWGSLLGSCRLH 696
             Q   I P+   +  + + L + G   EA  +++++ E G   NV  I  + L +C   
Sbjct: 457 QMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVA-LSACANL 515

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
                   V   ++     +S       L ++YA+ G+    +KV
Sbjct: 516 ASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKV 560



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 184/376 (48%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++   GQQ+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 40  RDFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 99

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM K     D+  V  +  A   L+ +  G+  H Y+ + G
Sbjct: 100 IIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSG 159

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +     + S L DMY K G++  AR++F+  +  +R+   WNA++ GY QNG+ EEA   
Sbjct: 160 LDDCVFVASSLADMYGKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRL 217

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M E  V P  VT+++ L A   MG +E GKQ H  ++   L+ +  +GTS+++ Y K
Sbjct: 218 MCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCK 277

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G++ YA  VF ++  K+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 278 VGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTL 337

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +S  +       G ++     Q Y I+ S E    +A    DM  + G +V+A +     
Sbjct: 338 MSTAARTQNSKLGKEV-----QCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDST 392

Query: 677 GEEGNVLEIWGSLLGS 692
            ++  +L  W +LL +
Sbjct: 393 VQKDLIL--WNTLLAA 406



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 135/253 (53%), Gaps = 5/253 (1%)

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF- 444
             +NG   E L LV EM  +   I       +L      R+   G+Q HA +L++G  + 
Sbjct: 1   LCKNGEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYA 60

Query: 445 --EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             E +E+ L+  YAK   ++ A  +F K     R+  +W A+I    + GL+E A + F 
Sbjct: 61  KNEYIETKLVIFYAKCDALEIAEVLFSKLRV--RNVFSWAAIIGVKCRMGLVEGALMGFV 118

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +ML+  + P+   + +V  AC  +     G+ +HG+  +  LD  VFV +SL DMY K G
Sbjct: 119 EMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCG 178

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           V++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  G+EP  +T    LS
Sbjct: 179 VLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLS 238

Query: 623 ACSYAGLVDEGLQ 635
           A +  G V+EG Q
Sbjct: 239 ASANMGGVEEGKQ 251



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 194/453 (42%), Gaps = 83/453 (18%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+      
Sbjct: 270 SVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKF 329

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++   A T+N ++GK V C+ IR        + ++ ++MY+ C S +DA+ 
Sbjct: 330 DC--VTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAK- 386

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+  +++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 387 -----------------KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVP 429

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS I             
Sbjct: 430 PNVITWNLIILSLLRNGQVDEAKKMF-------------LQMQSSGIV------------ 464

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVS 341
                        W TM+ G VQN    EAI    ++ E  +   VF   +   ALSA +
Sbjct: 465 --------PTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVF---SITVALSACA 513

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNA-----------------VIERDVVS----WN 380
            L  L  G+ +H YII+N +    + +                   V  R + S    +N
Sbjct: 514 NLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYN 573

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-R 439
            MISA+   G  +E + L   +   G   D++T T +LSA ++  + +   +  + ++ +
Sbjct: 574 AMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSK 633

Query: 440 HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           HG+    +E Y  ++D+ A +G  + A ++ E+
Sbjct: 634 HGVK-PCLEHYGLMVDLLASAGETEKALRLMEE 665


>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
 gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 212/734 (28%), Positives = 375/734 (51%), Gaps = 56/734 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H +R +F  I      +WN+ ++ +     P E I+LY ++K +      +  T + 
Sbjct: 94  GALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQ--IGFNGKTITF 151

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+K+C E +NL +GK VH   ++   + ++FV +SL+ +YS                   
Sbjct: 152 VMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYS------------------K 193

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM---MLRMGIRPSTISF 229
           +SK +    VF+ +  +++VA+ ++++ Y +T   + A   F +   ML+  +  + ++ 
Sbjct: 194 FSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSI-AWNAFEIATDMLQNNLEVNRVTL 252

Query: 230 VNVFPALSSLGDYKSADVV--YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           V++     +LG  +    +  Y +   +G   V+D  + +S +  Y   G +  A  +  
Sbjct: 253 VSLLQIAGNLGALQEGKSLHCYSIRRAIG---VSDDILETSIVNFYTRCGAYQSAATVLQ 309

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           N  +     WN ++ G  +      AI+    +L   ++  D VTF + LSA ++L    
Sbjct: 310 NS-KGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFC 368

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
               +HAY I+ F+ + V++  A+IE                    +DVVS+N MI  ++
Sbjct: 369 FAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYL 428

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           QN + +E   L+  M  +G   D  TV +LL+A ++ R+   G+  H + +RHG   +  
Sbjct: 429 QNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVD 488

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +E+ ++ MY+  G I  AR IF+  +   ++  +W AM+ G   NG  +E    F+ M +
Sbjct: 489 VENQILYMYSACGKIAAARAIFDSLEK--KNLVSWTAMMKGCLSNGHADEVVQLFQVMQK 546

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           +   P+ V++ + + A + +G++   KQ+H F  R LL+++     SLI  Y+K G ++ 
Sbjct: 547 YGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDL 606

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +A +F  +  +N  T+  MI  Y  HG     L +F+ M+   I+PD +TF  VL+ACS+
Sbjct: 607 SAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSH 666

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV +G +IF+ M   Y + P  EHY C+ D+LGR G + + Y+F+K L    +   I+
Sbjct: 667 AGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIK-LSTLKDKSTIF 725

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LL +CR HG++ LA  ++K+LLE   +N  PG + L+S +YA+EG W  V   +    
Sbjct: 726 CALLSACRTHGNTRLAHAISKELLEHGPQN--PGIYALISEVYAQEGQWNEVANTKARAD 783

Query: 747 ERGLRKEVGCSWID 760
             GL+K  G S I+
Sbjct: 784 LSGLKKHPGSSLIE 797



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 231/477 (48%), Gaps = 50/477 (10%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ + S  +  YA LG    +R +F   +  +  +WN+ +  Y +  +P E I L+ + L
Sbjct: 79  DVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILY-KRL 137

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------- 366
           +L++I F+  T    + + ++L+ L LG+ +HA  +K       FV   +I         
Sbjct: 138 KLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKT 197

Query: 367 -----VLNAVIERDVVSWNTMISAFVQ--NGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                V   +I +D+V++ +MI+ + +  + +      +  +M +    ++ VT+ +LL 
Sbjct: 198 NDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQ 257

Query: 420 AASNLRNQDVGKQTHAYLLRH--GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
            A NL     GK  H Y +R   G+  + +E+ +++ Y + G  ++A  + + N  G   
Sbjct: 258 IAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQ-NSKG--T 314

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
            A+WNA+++G  + G    A      ML EH VTP+ VT A+VL AC  +        +H
Sbjct: 315 VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIH 374

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            + IR  +  +V + T+LI++Y+K   +  +  +F ++  K+ V+Y  MI GY Q+ M+ 
Sbjct: 375 AYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMAN 434

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-YCC 655
            A SL   M   G+ PD  T +++L+A       D+     DL++  +    +  H +C 
Sbjct: 435 EATSLLNYMMAEGVAPDFATVLSLLAA-----FADQR----DLVRGRWIHGFAIRHGFCS 485

Query: 656 VAD-------MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
             D       M    GK+  A      L E+ N++  W +++  C  +GH++  EVV
Sbjct: 486 DVDVENQILYMYSACGKIAAARAIFDSL-EKKNLVS-WTAMMKGCLSNGHAD--EVV 538


>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08490
 gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 220/794 (27%), Positives = 397/794 (50%), Gaps = 84/794 (10%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKAC 117
           +++F  +     V+WN ++ G   +    E +  +  M     P  S  + T++ VL  C
Sbjct: 76  QKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPS--SVTFAIVLPLC 132

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +   GK++H + I+        V N+L++MY+             K+  +    Y 
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA-------------KFGFIFPDAY- 178

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD +  ++VV+WN I++ + +     +A R F +ML+    P+  +  NV P  +
Sbjct: 179 ---TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235

Query: 238 SLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           S+      +S   ++  +V+  S     +FV +S +  Y  +G  + A  +F     ++ 
Sbjct: 236 SMDKNIACRSGRQIHSYVVQR-SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GY  N    +A +LF  ++   ++  D VT +S L   +QL +L  G+++H+
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354

Query: 355 YIIKN-FVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
           YI+++ ++     V NA+I                     +D++SWN ++ AF  +    
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME----S 449
           + L L++ +  +   +DSVT+ +LL    N++     K+ H Y ++ G+  +  E    +
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN 474

Query: 450 YLIDMYAKSGLIKTARQIF----EKN-------------DSGDRDQA------------- 479
            L+D YAK G ++ A +IF    E+              +SG  D A             
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           TW+ M+  Y ++    EA   FR++    + PN VTI ++LP C  + ++ L +Q HG+ 
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           IR  L      GT L+D+Y+K G + +A +VF     ++ V +T M+ GY  HG  + AL
Sbjct: 595 IRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            ++  M    I+PD +    +L+AC +AGL+ +GLQI+D ++  + ++P+ E Y C  D+
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDL 713

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           + R G++ +AY FV ++  E N   IWG+LL +C  +   +L   VA  LL+ ++ ++  
Sbjct: 714 IARGGRLDDAYSFVTQMPVEPNA-NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT-- 770

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G HVL+SN+YA +  WE V ++R  M+++ ++K  GCSW++V G  N F S D  HP+  
Sbjct: 771 GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRD 830

Query: 780 KIYEMLERLAMEMR 793
            I++++  L ++M+
Sbjct: 831 SIFDLVNALYLQMK 844



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 248/533 (46%), Gaps = 57/533 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  +  V+KACA   +L  G+A+H    +        V  S+LNMY+ C    D +   
Sbjct: 20  DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ--- 76

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY-VKTERYVEAVRQFRMM-LRMGIR 223
                          K+F  M   + V WN +++   V   R  E +R F+ M      +
Sbjct: 77  ---------------KMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPK 119

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFDFA 282
           PS+++F  V P    LGD  +   ++  ++K G E   D  V ++ + MYA+ G  F  A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLE--KDTLVGNALVSMYAKFGFIFPDA 177

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVT-FLSALSAV 340
              FD   +++   WN +I G+ +NN   +A   F  +L E  E  +  +   L   +++
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237

Query: 341 SQLQELDLGQQLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSW 379
            +      G+Q+H+Y++ ++++   V V N+++                     +D+VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           N +I+ +  N    +   L + +  +G +  DSVT+ ++L   + L +   GK+ H+Y+L
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357

Query: 439 RHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           RH    E   + + LI  YA+ G    A   F    +  +D  +WNA++  +  +    +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST--KDIISWNAILDAFADSPKQFQ 415

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL---DQNVFVGTS 553
                  +L   +T + VTI S+L  C  +  I   K++HG+S++  L   ++   +G +
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSM 605
           L+D Y+K G + YA  +F  + E+ + V+Y +++ GY   G  + A  LF  M
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 207/639 (32%), Positives = 336/639 (52%), Gaps = 32/639 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+F      +V  WN  +S Y++     EAV  FR M++  +   +++++ +   ++SL 
Sbjct: 252 KLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLN 311

Query: 241 DYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
             +    ++G +V+ G  ++V+   VA+SAI MY + G  ++AR++F    E +   WNT
Sbjct: 312 HLELGKQIHGAVVRFGWDQFVS---VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNT 368

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIK 358
           +I G  ++     ++ LF+ +L    ++ D  T  S L A S L+E   +G+Q+H   +K
Sbjct: 369 VISGCARSGLEECSLRLFIDLLR-SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK 427

Query: 359 NFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLML 398
             + L   V  A+I+                     D+ SWN M+  F  +    E L L
Sbjct: 428 AGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRL 487

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M ++G   D +T      AA  L     GKQ HA +++   H++  + S ++DMY K
Sbjct: 488 FSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLK 547

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G +K+AR++F  N     D   W  +I+G  +NG  E+A   + QM    V P+  T A
Sbjct: 548 CGEMKSARKVF--NQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +++ AC+ +  +E GKQ+H   ++     + FV TSL+DMY+K G I  A  +F ++  +
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           +   +  MI+G  QHG +E AL+ F  MK  G+ PD +TF+ VLSACS++GL  +  + F
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           D MQ+ Y ++P  EHY C+ D L R G + EA + V  +  E +   ++ +LL +CR+ G
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASA-TMYRTLLNACRVQG 784

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
             E  E VA+KL  MD  +S    +VLLSNIYA    WEN    R  M+   ++KE G S
Sbjct: 785 DKETGERVAEKLFTMDPSDSAA--YVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFS 842

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           WID+   V+ F + D+ H ++  IY  +E +   ++  G
Sbjct: 843 WIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEG 881



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/553 (28%), Positives = 265/553 (47%), Gaps = 49/553 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LF         +WN  +  ++     +EA+  +  M KS     CD+ TY  +L   
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSR--VPCDSLTYIVILSVV 307

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +L +GK +H   +R   +    V NS +NMY             +K   V+Y++  
Sbjct: 308 ASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMY-------------VKAGSVNYAR-- 352

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++F  M+  ++++WNT++S   ++     ++R F  +LR G+ P   +  +V  A S
Sbjct: 353 ---RMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS 409

Query: 238 SLGD-YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SL + Y     V+   +K G   V D FV+++ I +Y++ G  + A  +F N    +   
Sbjct: 410 SLEESYCVGRQVHTCALKAG--IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLAS 467

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN M+ G+  +++  EA+ LF  + E  E   D +TF +A  A   L  L  G+Q+HA +
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKA-DQITFANAAKAAGCLVRLQQGKQIHAVV 526

Query: 357 IKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGL 396
           IK      + V++ +++                     D V+W T+IS  V+NG +++ L
Sbjct: 527 IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQAL 586

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
              ++M+  G   D  T   L+ A S L   + GKQ HA +++    F+  + + L+DMY
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G I+ A  +F + ++  R  A WNAMI G  Q+G  EEA   F +M    VTP+ VT
Sbjct: 647 AKCGNIEDAYGLFRRMNT--RSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVT 704

Query: 516 IASVLPACNPMG-NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
              VL AC+  G   +  K        Y ++  +   + L+D  S++G I  A  V + +
Sbjct: 705 FIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764

Query: 575 P-EKNSVTYTTMI 586
           P E ++  Y T++
Sbjct: 765 PFEASATMYRTLL 777



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 160/606 (26%), Positives = 283/606 (46%), Gaps = 53/606 (8%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S+L+      +L +GK  H   +    NP R+V N+L+ MY+ C S   A          
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSAR--------- 68

Query: 172 DYSKYDLVCKVFDTMRR--RNVVAWNTIVSWYVKT------ERYVEAVRQFRMMLRMGIR 223
                    K+FD   +  R++V +N I++ Y  T      E+  EA   FR++ +  + 
Sbjct: 69  ---------KLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVML 119

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            +  +   +F      G   +++ + G  VK+G ++  D+FVA + + +YA+      AR
Sbjct: 120 TTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQW--DVFVAGALVNIYAKFQRIREAR 177

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ- 342
            +FD    R+  +WN M+  YV+     E + LF        +  D V+  + L  V + 
Sbjct: 178 VLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF-SAFHRSGLRPDCVSVRTILMGVGKK 236

Query: 343 -LQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            + E +L +Q+ AY  K FV           + DV  WN  +S+++Q G   E +    +
Sbjct: 237 TVFEREL-EQVRAYATKLFVCDD--------DSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGL 460
           M K     DS+T   +LS  ++L + ++GKQ H  ++R G   F  + +  I+MY K+G 
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  AR++F +    + D  +WN +I+G  ++GL E +   F  +L   + P+  TI SVL
Sbjct: 348 VNYARRMFGQMK--EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405

Query: 521 PACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
            AC+ +  +  +G+Q+H  +++  +  + FV T+LID+YSK G +  A  +F      + 
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDL 465

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            ++  M+ G+        AL LF  M   G + D ITF     A      + +G QI  +
Sbjct: 466 ASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAV 525

Query: 640 ---MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
              M+  Y +   +     + DM  + G++  A +   ++    +V   W +++  C  +
Sbjct: 526 VIKMRFHYDLFVISG----ILDMYLKCGEMKSARKVFNQIPSPDDV--AWTTVISGCVEN 579

Query: 697 GHSELA 702
           G  E A
Sbjct: 580 GEEEQA 585



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 48/448 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S ++   + G  + AR++F  +     + WNT+I G   + L   ++ L+  + +S    
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP 396

Query: 104 SCDNYTYSSVLKACAE-TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
             D +T +SVL+AC+    +  +G+ VH   ++       FV  +L+++YS      +AE
Sbjct: 397 --DQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAE 454

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           +                  +F      ++ +WN ++  +  ++ Y EA+R F +M   G 
Sbjct: 455 L------------------LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGE 496

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           +   I+F N   A   L   +    ++ +++K+   Y  DLFV S  + MY + G    A
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHY--DLFVISGILDMYLKCGEMKSA 554

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           RK+F+     +   W T+I G V+N    +A+  + Q + L  +  D+ TF + + A S 
Sbjct: 555 RKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQ-MRLAGVQPDEYTFATLVKACSL 613

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
           L  L+ G+Q+HA I+K   A    V+ ++++                    R V  WN M
Sbjct: 614 LTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAM 673

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR-NQDVGKQTHAYLLRHG 441
           I    Q+G  +E L    EM+ +G   D VT   +LSA S+     D  K   +    +G
Sbjct: 674 IVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYG 733

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQI 467
           +  E +E Y  L+D  +++G I+ A ++
Sbjct: 734 VEPE-IEHYSCLVDALSRAGHIQEAEKV 760


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 222/722 (30%), Positives = 358/722 (49%), Gaps = 103/722 (14%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           N ++ + L      R+L+ GKA+H   I+  S+   ++ NSL+N+Y+ C    +A+ V  
Sbjct: 6   NRSFFTALLQYTHNRSLQKGKALHAQIIKS-SSSCVYIANSLVNLYAKCQRLREAKFV-- 62

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK--TERYVEAVRQFRMMLRMGIRP 224
                           F+ ++ ++VV+WN I++ Y +         +  F+ M      P
Sbjct: 63  ----------------FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAP 106

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  +F  VF A S+L D     + + + +K+ S    D+FV SS + MY + G    ARK
Sbjct: 107 NAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS--CRDVFVGSSLMNMYCKAGLTPEARK 164

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD   ERN+  W TMI GY       EA+ LF +++  +E   ++  F S LSA++  +
Sbjct: 165 VFDTMPERNSVSWATMISGYASQKLAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPE 223

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
            ++ G+Q+H   +KN +   V V NA++                    +++ ++W+ MI+
Sbjct: 224 LVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMIT 283

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              Q+G  D+ L L   M   G      T   +++A S+L     GKQ H YLL+ G  F
Sbjct: 284 GXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG--F 341

Query: 445 EG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           E    + + L+DMYAK   I  AR+ F+     + D   W +MI GY QNG  E+A   +
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQ--EPDIVLWTSMIGGYVQNGENEDALSLY 399

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +M    + PN +T+ASVL AC+ +  +E GKQ+H  +++Y     V +G++L  MY+K 
Sbjct: 400 GRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKC 459

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +     VF ++P ++ +++  MI G  Q+G  + AL LF  M+  G +PD +TFV +L
Sbjct: 460 GCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACS+ GLV+ G   F +M  E+ + P  EHY C+ D+L R GK+ EA EF      E  
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFT-----ESA 574

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
            ++           HG  E                                    +V++V
Sbjct: 575 TID-----------HGMWE------------------------------------DVERV 587

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
           R+ M+ RG+ KE GCSWI++   V+ F  KDQ HPQ   I+  L +L+ +M++ G +   
Sbjct: 588 RRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPAT 647

Query: 802 NS 803
           +S
Sbjct: 648 DS 649



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 170/615 (27%), Positives = 285/615 (46%), Gaps = 70/615 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           CQ  R   A+ +F+ I     V WN II G+  +     + ++    +  +  T+ + +T
Sbjct: 53  CQRLRE--AKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHT 110

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ V  A +   +   G+  H   I+  S    FV +SL+NMY  C + L  E       
Sbjct: 111 FAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY--CKAGLTPEAR----- 163

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      KVFDTM  RN V+W T++S Y   +   EA+  FR+M R     +   F
Sbjct: 164 -----------KVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  AL+      +   ++ + VK G   ++ + V ++ + MYA+ G  D A + F+  
Sbjct: 213 TSVLSALTLPELVNNGKQIHCIAVKNG--LLSIVSVGNALVTMYAKCGSLDDALQTFETS 270

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ++N+  W+ MI G  Q+    +A++LF   + L  I   + TF+  ++A S L     G
Sbjct: 271 SDKNSITWSAMITGXAQSGDSDKALKLF-SSMHLSGIRPSEFTFVGVINACSDLGAAWEG 329

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +Q+H Y++K      + V+ A++                    E D+V W +MI  +VQN
Sbjct: 330 KQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQN 389

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G +++ L L   M+ +G + + +T+ ++L A S+L   + GKQ HA  +++G   E  + 
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L  MYAK G +K    +F +  +  RD  +WNAMI+G +QNG  +EA   F +M    
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPA--RDVISWNAMISGLSQNGCGKEALELFEEMQLEG 507

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYA 567
             P+ VT  ++L AC+ MG +E G          + +D  V     ++D+ S++G     
Sbjct: 508 TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAG----- 562

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
                K+ E    T +  I     HGM E    + R MK  G+  +          CS+ 
Sbjct: 563 -----KLKEAIEFTESATI----DHGMWEDVERVRRMMKLRGVSKEP--------GCSWI 605

Query: 628 GLVDEGLQIFDLMQQ 642
            L   G+ +F +  Q
Sbjct: 606 EL-KSGVHVFVVKDQ 619



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 48/460 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S ++  C+ G    AR++FD++    +V W T+I G+    L  EA+ L+  M++     
Sbjct: 148 SLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGE 207

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             + + ++SVL A      +  GK +HC  ++        V N+L+ MY+ C S  DA  
Sbjct: 208 --NEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA-- 263

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            + F+T   +N + W+ +++   ++    +A++ F  M   GIR
Sbjct: 264 ----------------LQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIR 307

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  +FV V  A S LG       V+  L+KLG E  + ++V ++ + MYA+      AR
Sbjct: 308 PSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFE--SQIYVMTALVDMYAKCSSIVDAR 365

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K FD   E +  +W +MIGGYVQN    +A+ L+ + +E++ I+ +++T  S L A S L
Sbjct: 366 KGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR-MEMEGILPNELTMASVLKACSSL 424

Query: 344 QELDLGQQLHAYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMI 383
             L+ G+Q+HA  +K    L V                    +V   +  RDV+SWN MI
Sbjct: 425 AALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMI 484

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S   QNG   E L L  EMQ +G   D VT   +LSA S++   + G      +      
Sbjct: 485 SGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGM 544

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
              +E Y  ++D+ +++G +K A    E  +S   D   W
Sbjct: 545 DPRVEHYACMVDILSRAGKLKEA---IEFTESATIDHGMW 581


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 212/712 (29%), Positives = 362/712 (50%), Gaps = 46/712 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D   + ++L+ C+  +N+  G+ VH H        +  V   L+ MY+ C S  +A+   
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ--- 60

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          +VF+ + R++V AW  ++  Y +   Y  A+  F  M    + P+
Sbjct: 61  ---------------QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 105

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            +++V +  A +S    K    ++G +++ G E   D+FV ++ I MY + G    A   
Sbjct: 106 KVTYVAILNACASTESLKDGMEIHGQILQQGFE--GDVFVGTALINMYNKCGSVRGAWDS 163

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     R+   W  MI   VQ++    A  L+ + ++LD +V + +T  +  +A      
Sbjct: 164 FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRR-MQLDGVVPNKITLYTVFNAYGDPHY 222

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNA--------------------VIERDVVSWNTMISA 385
           L  G+ +++ +    +   V V+N+                    +++RDVV+WN +I+ 
Sbjct: 223 LSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITF 282

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +VQN    E + L   +Q+ G   + +T   +L+  ++L +   GK  H  +   G   +
Sbjct: 283 YVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRD 342

Query: 446 GM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            +  + L+ +Y +      A +IF   D G +D  TW  M   Y QNG  +EA   F++M
Sbjct: 343 VVVATALMSLYGRCEAPGQAWKIFV--DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEM 400

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
                 P   T+ +VL  C  +  ++ G+Q+H   I       + V T+LI+MY K G +
Sbjct: 401 QLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKM 460

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A +VF K+ +++ + + +M+  Y QHG  +  L LF  M+  G + DA++FV+VLSA 
Sbjct: 461 AEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSAL 520

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++G V +G Q F  M Q++ I P+ E Y CV D+LGR G++ EA + V +L        
Sbjct: 521 SHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGI 580

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           +W +LLG+CR H  ++ A+  A+++LE D  +S  G +V+LSN+YA  G+W+ V+++RK 
Sbjct: 581 LWMTLLGACRTHNKTDQAKAAAEQVLERDPSHS--GAYVVLSNVYAAAGDWDGVNRMRKL 638

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           MR RG++KE G S I++   V+ F   D+ HP+ H IY  L+ L  EMR AG
Sbjct: 639 MRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 690



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 175/402 (43%), Gaps = 35/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ +     V WN +I  +V N    EA+ L+ ++++       ++ T+  +L   
Sbjct: 261 ARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDG--IKANDITFVLMLNVY 318

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +L  GK +H        +    V  +L+++Y  C      E  G  +         
Sbjct: 319 TSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRC------EAPGQAW--------- 363

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  M  ++V+ W  +   Y +     EA++ F+ M   G RP++ + V V    +
Sbjct: 364 ---KIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 420

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    ++  +++ G  +  ++ V ++ I MY + G    AR +F+   +R+  VW
Sbjct: 421 HLAALQKGRQIHSHIIENG--FRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVW 478

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+G Y Q+ +  E ++LF Q ++LD    D V+F+S LSA+S    +  G Q    ++
Sbjct: 479 NSMLGAYAQHGYYDETLQLFNQ-MQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAML 537

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           ++F   P   L          +  ++    + G   E + +V ++   G + D +    L
Sbjct: 538 QDFSITPTPEL----------YGCVVDLLGRAGRIQEAVDIVLKL--SGCLPDGILWMTL 585

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L A       D  K     +L       G    L ++YA +G
Sbjct: 586 LGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAG 627



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 5/200 (2%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+     ++L  C+   N++ G+++H        +QN  V   LI MY++ G +  A  V
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +  K+   +T MI  Y Q G  +RAL +F  M+   + P  +T+VA+L+AC+    +
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 631 DEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            +G++I   ++QQ ++          + +M  + G V  A++  K L E  +V+  W ++
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRL-EHRDVVS-WTAM 178

Query: 690 LGSCRLHGHSELAEVVAKKL 709
           + +C  H    LA  + +++
Sbjct: 179 IAACVQHDQFALARWLYRRM 198



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 20/186 (10%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  A ++F  +     + W  + + +  N    EA+ L+ +M+      +  + T  +VL
Sbjct: 359 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT--SATLVAVL 416

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
             CA    L+ G+ +H H I         V  +L+NMY  C    +A             
Sbjct: 417 DTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEAR------------ 464

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                  VF+ M +R+++ WN+++  Y +   Y E ++ F  M   G +   +SFV+V  
Sbjct: 465 ------SVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLS 518

Query: 235 ALSSLG 240
           ALS  G
Sbjct: 519 ALSHSG 524


>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 220/725 (30%), Positives = 365/725 (50%), Gaps = 108/725 (14%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ +L+ C+++    + + +H   I   S+ S F+   ++++Y+      DA+ V     
Sbjct: 37  FNDLLQQCSKSH---LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRV----- 88

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
              +    + C         N++ WN+I+   V      EA+  +  M ++G+     +F
Sbjct: 89  ---FEVSPIEC-------FSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 138

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A + +G  K    V+G +V++G ++  +L V +  + MY ++G  D ARK+F+  
Sbjct: 139 PLVIRACALMGSRKLCRSVHGHVVEMGFQW--NLHVGNELMGMYGKIGRMDDARKVFERM 196

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             R+   WNTM+ GY  N     A E+F                                
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFR------------------------------- 225

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                           ++ +A +E ++V+W +++S+  + G   E + L   M+ +G   
Sbjct: 226 ----------------MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGA 269

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIF 468
            +  +  +LS + +L   D GK  H Y+++ G  ++  +++ LI +Y K G +  AR +F
Sbjct: 270 TAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILF 329

Query: 469 ----EKN------------DSGDRDQA---------------------TWNAMIAGYTQN 491
                KN            D G  D+A                     +W+A+I G+   
Sbjct: 330 LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASK 389

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  EEA   FR+M    V  N VTIASVL  C  +  + LG+++HG  +R L+D N+ VG
Sbjct: 390 GQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVG 449

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             LI+MY+KSG       VF KI  K+ +++ TM+ GYG HG+ E A+  F  M   G E
Sbjct: 450 NGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFE 509

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +TFVAVLSACS+AGLV EG ++FD M +E++++P  EHY C+ D+LGR G + EA +
Sbjct: 510 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASK 569

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            VK +  E N   +WG+LL SCR+H ++E+AE  A ++  +++   + G ++LLSNIYA 
Sbjct: 570 VVKSMPVEPNAC-VWGALLNSCRMHKNTEVAEETASQIFNLNSE--IAGSYMLLSNIYAA 626

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G WE+  KVR   + +GL+K  G SWI V   V  F++ + +H +  ++Y +L+ L ++
Sbjct: 627 SGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQ 686

Query: 792 MRNAG 796
           M   G
Sbjct: 687 MEVEG 691



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 217/511 (42%), Gaps = 120/511 (23%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           ++WN+I+   V +    EA+ +Y +M+K     S D +T+  V++ACA   + ++ ++VH
Sbjct: 101 LLWNSILRANVAHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLCRSVH 158

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
            H +      +  V N L+ MY                      + D   KVF+ M  R+
Sbjct: 159 GHVVEMGFQWNLHVGNELMGMYGKI------------------GRMDDARKVFERMAVRS 200

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD--------- 241
            V+WNT+VS Y        A   FRMM   G+ P+ +++ ++  + +  G          
Sbjct: 201 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 260

Query: 242 --------------------------YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                                     +    V++G +VK G E  N LFV +S I +Y +
Sbjct: 261 RMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE--NYLFVKNSLICLYGK 318

Query: 276 LGCFDFARKIFDNCLERNTEVWNTM----------------------------------- 300
            G  + AR +F     +N   WN +                                   
Sbjct: 319 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 378

Query: 301 ----IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
               IGG+       EA+ELF + ++L ++  + VT  S LS  ++L  L LG+++H ++
Sbjct: 379 WSAVIGGFASKGQGEEALELF-RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +++ +   ++V N +I                     +D++SWNTM++ +  +GL +  +
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
               +M K GF  D VT  A+LSA S+      G++    +++       ME Y  ++D+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
             ++GL++ A ++  K+   + +   W A++
Sbjct: 558 LGRAGLLQEASKVV-KSMPVEPNACVWGALL 587



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 26/280 (9%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           + RP  V W+ +I GF       EA+ L+ +M+ +      ++ T +SVL  CAE   L 
Sbjct: 371 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK--VKANSVTIASVLSVCAELAALH 428

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           +G+ +H H +R   + +  V N L+NMY+   S  +  +                  VF+
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL------------------VFE 470

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            +  +++++WNT+V+ Y        A+R F  M++ G  P  ++FV V  A S  G    
Sbjct: 471 KIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAE 530

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSA--IFMYAELGCFDFARKIFDNC-LERNTEVWNTMI 301
              ++  ++K   E+  +  +   A  + +    G    A K+  +  +E N  VW  ++
Sbjct: 531 GRELFDKMIK---EFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
                + +   A E   Q+  L+  +      LS + A S
Sbjct: 588 NSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAAS 627


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 204/636 (32%), Positives = 340/636 (53%), Gaps = 36/636 (5%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSSLGDYKS 244
           RN V+WN+++  +       E+      M+         P   + V V P  +   +   
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              V+G  VKL  +   +L + ++ + MY++ GC   A+ IF     +N   WNTM+GG+
Sbjct: 61  GKGVHGWAVKLRLD--KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 305 VQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
                     ++  Q+L   E V  D+VT L+A+        L   ++LH Y +K     
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178

Query: 364 PVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             +V NA +                     + V SWN +I    Q+      L    +M+
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL--IDMYAKSGLI 461
             G + DS TV +LLSA S L++  +GK+ H +++R+ +  + +  YL  + +Y   G +
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD-LFVYLSVLSLYIHCGEL 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
            T + +F+  +  D+   +WN +I GY QNG  + A   FRQM+ + +    +++  V  
Sbjct: 298 CTVQALFDAME--DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC+ + ++ LG++ H +++++LL+ + F+  SLIDMY+K+G I  ++ VF  + EK++ +
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +  MI+GYG HG+++ A+ LF  M+  G  PD +TF+ VL+AC+++GL+ EGL+  D M+
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV-KELGEEGNVLEIWGSLLGSCRLHGHSE 700
             + ++P+ +HY CV DMLGR G++ +A   V +E+ EE +V  IW SLL SCR+H + E
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV-GIWKSLLSSCRIHQNLE 534

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           + E VA KL E++     P  +VLLSN+YA  G WE+V KVR+ M E  LRK+ GCSWI+
Sbjct: 535 MGEKVAAKLFELEPEK--PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 592

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   V  F   ++      +I  +   L M++   G
Sbjct: 593 LNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 628



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 258/529 (48%), Gaps = 49/529 (9%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLKACAETRNLRIGKA 128
           V WN++I  F  N    E+ LL  +M + +   +   D  T  +VL  CA  R + +GK 
Sbjct: 4   VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 63

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VH   ++   +    + N+L++MYS C    +A+M                  +F     
Sbjct: 64  VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM------------------IFKMNNN 105

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSAD 246
           +NVV+WNT+V  +             R ML  G  ++   ++ +N  P         S  
Sbjct: 106 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 165

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++     L  E+V +  VA++ +  YA+ G   +A+++F     +    WN +IGG+ Q
Sbjct: 166 ELH--CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 223

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------F 360
           +N P  +++  +Q +++  ++ D  T  S LSA S+L+ L LG+++H +II+N      F
Sbjct: 224 SNDPRLSLDAHLQ-MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 282

Query: 361 VALPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V L V+ L              +A+ ++ +VSWNT+I+ ++QNG  D  L +  +M   G
Sbjct: 283 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 342

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTAR 465
             +  +++  +  A S L +  +G++ HAY L+H +  +  +   LIDMYAK+G I  + 
Sbjct: 343 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 402

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F  N   ++  A+WNAMI GY  +GL +EA   F +M      P+ +T   VL ACN 
Sbjct: 403 KVF--NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 460

Query: 526 MGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            G I  G + L      + L  N+     +IDM  ++G ++ A  V A+
Sbjct: 461 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 509



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 196/462 (42%), Gaps = 65/462 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +F        V WNT++ GF      +    +  QM         D  T  + +  C
Sbjct: 96  AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 155

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L   K +H     C+S    FVYN L+   +    +  A+   L Y +       
Sbjct: 156 FHESFLPSLKELH-----CYSLKQEFVYNELV---ANAFVASYAKCGSLSYAQ------- 200

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  +R + V +WN ++  + ++     ++     M   G+ P + +  ++  A S
Sbjct: 201 ---RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 257

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    V+G +++   E   DLFV  S + +Y   G     + +FD   +++   W
Sbjct: 258 KLKSLRLGKEVHGFIIRNWLE--RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 315

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT+I GY+QN  P  A+ +F Q++ L  I    ++ +    A S L  L LG++ HAY +
Sbjct: 316 NTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 374

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K+      F+A  +I              V N + E+   SWN MI  +  +GL  E + 
Sbjct: 375 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 434

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESY------ 450
           L  EMQ+ G   D +T   +L+A +           H+ L+  G+ + + M+S       
Sbjct: 435 LFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEGLRYLDQMKSSFGLKPN 483

Query: 451 ------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
                 +IDM  ++G +  A ++  +  S + D   W ++++
Sbjct: 484 LKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 525



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 200/420 (47%), Gaps = 39/420 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+++F  I   T   WN +I G   +N P  ++  + QMK S      D++T  S
Sbjct: 194 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP--DSFTVCS 251

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC++ ++LR+GK VH   IR +     FVY S+L++Y  C      E+  ++     
Sbjct: 252 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC-----GELCTVQ----- 301

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +FD M  +++V+WNT+++ Y++      A+  FR M+  GI+   IS + V
Sbjct: 302 --------ALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 353

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A S L   +     +   +K   E  +D F+A S I MYA+ G    + K+F+   E+
Sbjct: 354 FGACSLLPSLRLGREAHAYALKHLLE--DDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 411

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  WN MI GY  +    EAI+LF ++        DD+TFL  L+A +    +  G + 
Sbjct: 412 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNP-DDLTFLGVLTACNHSGLIHEGLRY 470

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              +  +F   P          ++  +  +I    + G  D+ L +V E   +    D  
Sbjct: 471 LDQMKSSFGLKP----------NLKHYACVIDMLGRAGQLDKALRVVAEEMSE--EADVG 518

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQIFEK 470
              +LLS+    +N ++G++  A L    +  E  E+Y++  ++YA  G  +  R++ ++
Sbjct: 519 IWKSLLSSCRIHQNLEMGEKVAAKLFE--LEPEKPENYVLLSNLYAGLGKWEDVRKVRQR 576


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 218/761 (28%), Positives = 396/761 (52%), Gaps = 50/761 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A++LF+ +     V W ++++G+  +  P E + +Y +M++     S +  T+++V  +C
Sbjct: 900  AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG--VSGNQNTFATVTSSC 957

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                +  +G  V  H I+     S  V NSL++M+S+                  +S  +
Sbjct: 958  GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS------------------FSSVE 999

Query: 178  LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              C VFD M   ++++WN ++S Y       E++R F  M  +    ++ +  ++    S
Sbjct: 1000 EACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCS 1059

Query: 238  SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            S+ + K    ++GL+VKLG +  +++ + ++ + +Y+E G  + A  +F    ER+   W
Sbjct: 1060 SVDNLKWGRGIHGLVVKLGLD--SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISW 1117

Query: 298  NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            N+M+  YVQ+   ++ +++  ++L++ + V + VTF SAL+A S  + L   + +HA II
Sbjct: 1118 NSMMACYVQDGKCLDGLKILAELLQMGK-VMNHVTFASALAACSNPECLIESKIVHALII 1176

Query: 358  KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
                   +IV NA++                    + D V+WN +I    +N   +E + 
Sbjct: 1177 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 1236

Query: 398  LVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
                ++++G   + +T+ ++L A S   +    G   HA+++  G   +  +++ LI MY
Sbjct: 1237 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 1296

Query: 456  AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            AK G + ++  IF+    G++   TWNAM+A    +G  EEA   F +M    V  +  +
Sbjct: 1297 AKCGDLNSSNYIFD--GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 1354

Query: 516  IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             +  L A   +  +E G+QLHG  I+   + ++ V  + +DMY K G ++    +  +  
Sbjct: 1355 FSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 1414

Query: 576  EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
             ++ +++  +I  + +HG  ++A   F  M   G +PD +TFV++LSAC++ GLVDEGL 
Sbjct: 1415 NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 1474

Query: 636  IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             +D M +E+ + P  EH  C+ D+LGR G++  A  F+KE+    N L  W SLL +CR+
Sbjct: 1475 YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA-WRSLLAACRI 1533

Query: 696  HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            HG+ ELA   A+ LLE+D  +     +VL SN+ A  G WE+V+ +RKEM    ++K+  
Sbjct: 1534 HGNLELARKTAEHLLELDPSDDSA--YVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPA 1591

Query: 756  CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            CSW+ +   V+ F   ++ HPQ+ +I   L  L    + AG
Sbjct: 1592 CSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAG 1632



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 165/539 (30%), Positives = 287/539 (53%), Gaps = 30/539 (5%)

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           K   +++  L+  G  + +DL + +  I  Y ++G    AR +FD   ER+   W  M+ 
Sbjct: 47  KQGHLIHTHLITNG--FGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVS 104

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
           GY QN    +A  LF  +     +  +  T+ SAL A + L+ LD+G Q+   I K    
Sbjct: 105 GYSQNGRFEKAFVLFSDMRHCG-VKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFV 163

Query: 360 ---FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
              FV   ++              +   ++ERDVVSWN MI  +   G  D+   +   M
Sbjct: 164 ENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSM 223

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLI 461
            + G + D  T+ ++L A++      +  Q H  + + G   ++ +   LI+ YAK+G +
Sbjct: 224 LRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSL 283

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE-EAFVAFRQMLEHNVTPNVVTIASVL 520
           ++A+ +  +     +D  +  A+I GY   G+   +A   F++M + N+  + V + S+L
Sbjct: 284 RSAKDL--RKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSML 341

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
             C  + +  LG Q+H F+++Y    +V +G +LIDMY+KSG I  A   F ++ EKN +
Sbjct: 342 NICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVI 401

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           ++T++I GY +HG    A+SL++ M+  G +P+ +TF+++L ACS+ GL  EG + F+ M
Sbjct: 402 SWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNM 461

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
             +Y I+P  EHY C+ D+  R G + EAY  + ++  + N   +WG++LG+  ++G+  
Sbjct: 462 VNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNA-SLWGAILGASSIYGYMS 520

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           L +  A  L  M   NS+   +V+L++IY+  G W++  K+RK M ER  +K  G S+ 
Sbjct: 521 LGKEAASNLFNMQPENSVN--YVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFF 577



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 180/714 (25%), Positives = 329/714 (46%), Gaps = 56/714 (7%)

Query: 37   LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
             +T T+ +  SK    G    AR +FD +       W+T++ G+V   L  EA+ L+ QM
Sbjct: 780  FQTNTLINMYSKF---GNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQM 836

Query: 97   KKSSPYTSCDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
                     + +  +S++ AC+ +  +   G  VH   ++       +V  +L++ Y + 
Sbjct: 837  WGLG--VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS- 893

Query: 156  LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                    +GL Y            K+F+ M   NVV+W +++  Y  +    E +  ++
Sbjct: 894  --------IGLVYNAQ---------KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 936

Query: 216  MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
             M + G+  +  +F  V  +   L D      V G +++ G E  + + VA+S I M++ 
Sbjct: 937  RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE--DSVSVANSLISMFSS 994

Query: 276  LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
                + A  +FD+  E +   WN MI  Y  +    E++  F  +  L     +  T  S
Sbjct: 995  FSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET-NSTTLSS 1053

Query: 336  ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN--------------------AVIERD 375
             LS  S +  L  G+ +H  ++K  +   V + N                    A+ ERD
Sbjct: 1054 LLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERD 1113

Query: 376  VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            ++SWN+M++ +VQ+G   +GL ++ E+ + G +++ VT  + L+A SN       K  HA
Sbjct: 1114 LISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHA 1173

Query: 436  YLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
             ++  G H F  + + L+ MY K G++  A+++ +     DR   TWNA+I G+ +N   
Sbjct: 1174 LIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR--VTWNALIGGHAENEEP 1231

Query: 495  EEAFVAFRQMLEHNVTPNVVTIASVLPACN-PMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             EA  A++ + E  +  N +T+ SVL AC+ P   ++ G  +H   +    + + +V  S
Sbjct: 1232 NEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNS 1291

Query: 554  LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
            LI MY+K G +N +  +F  +  K+ +T+  M+     HG  E AL +F  M+  G+  D
Sbjct: 1292 LITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLD 1351

Query: 614  AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
              +F   L+A +   +++EG Q+  L+ +    +          DM G+ G   E ++ +
Sbjct: 1352 QFSFSGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCG---EMHDVL 1407

Query: 674  KELGEEGNVLEI-WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            K L +  N   + W  L+ +   HG  + A     ++L++  +     +  LLS
Sbjct: 1408 KMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLS 1461



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 264/535 (49%), Gaps = 47/535 (8%)

Query: 114  LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
            LK  +E  +   GKA+H   I    N   F  N+L+NMYS             K+  +++
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYS-------------KFGNIEH 797

Query: 174  SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
            ++Y     VFD MR RN  +W+T++S YV+   Y EAV  F  M  +G+ P+     ++ 
Sbjct: 798  ARY-----VFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 852

Query: 234  PALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S  G        V+G +VK G   + D++V ++ +  Y  +G    A+K+F+   + 
Sbjct: 853  TACSRSGYMADEGFQVHGFVVKTG--ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH 910

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            N   W +++ GY  + +P E + ++ Q +  + +  +  TF +  S+   L++  LG Q+
Sbjct: 911  NVVSWTSLMVGYSDSGNPGEVLNVY-QRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQV 969

Query: 353  HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
              +II+      V V N++I                    E D++SWN MISA+  +GL 
Sbjct: 970  LGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLC 1029

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
             E L   + M+      +S T+++LLS  S++ N   G+  H  +++ G+     + + L
Sbjct: 1030 RESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTL 1089

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            + +Y+++G  + A  +F+     +RD  +WN+M+A Y Q+G   +      ++L+     
Sbjct: 1090 LTLYSEAGRSEDAELVFQAMT--ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM 1147

Query: 512  NVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            N VT AS L AC NP   IE  K +H   I       + VG +L+ MY K G++  A  V
Sbjct: 1148 NHVTFASALAACSNPECLIE-SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206

Query: 571  FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
               +P+ + VT+  +I G+ ++     A+  ++ ++  GI  + IT V+VL ACS
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 225/492 (45%), Gaps = 53/492 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +   + V W  ++ G+  N    +A +L+S M+        + +TY S L+AC
Sbjct: 84  ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG--VKANQFTYGSALRAC 141

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              R L +G  V     +     + FV ++L++ +S C    DA  +             
Sbjct: 142 TSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYL------------- 188

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F TM  R+VV+WN ++  Y       ++   FR MLR G+ P   +  +V  A +
Sbjct: 189 -----FGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
             G    A+ ++G++ +LG  Y +   V    I  YA+ G    A+ +    L+++    
Sbjct: 244 EGGGLIIANQIHGIITQLG--YGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 301

Query: 298 NTMIGGYVQNN-HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
             +I GY     + V+A++LF ++ +++ I  DDV   S L+  + L    LG Q+HA+ 
Sbjct: 302 TALITGYAHEGIYSVDALDLFKEMNQMN-IGMDDVILCSMLNICANLASFALGTQIHAFA 360

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K   +  V + NA+I                    E++V+SW ++IS + ++G     +
Sbjct: 361 LKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAV 420

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGME-SYLIDM 454
            L  +M+ +GF  + VT  +LL A S+      G +    ++ ++ I       S ++D+
Sbjct: 421 SLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDL 480

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL----EEAFVAFRQMLEHNVT 510
           +A+ GL++ A  +  K D    + + W A++   +  G +    E A   F    E++V 
Sbjct: 481 FARQGLLEEAYNLLCKIDI-KHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSV- 538

Query: 511 PNVVTIASVLPA 522
            N V +AS+  A
Sbjct: 539 -NYVVLASIYSA 549



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 13/285 (4%)

Query: 418  LSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDR 476
            L   S + +Q  GK  HA+ +   ++    ++  LI+MY+K G I+ AR +F+  +   R
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFD--EMRHR 808

Query: 477  DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQL 535
            ++A+W+ M++GY + GL EEA   F QM    V PN   +AS++ AC+  G + + G Q+
Sbjct: 809  NEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQV 868

Query: 536  HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
            HGF ++  +  +V+VGT+L+  Y   G++  A  +F ++P+ N V++T++++GY   G  
Sbjct: 869  HGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNP 928

Query: 596  ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE---GLQIFDLMQQEYKIQPSTEH 652
               L++++ M+  G+  +  TF  V S+C   GL+++   G Q+   + Q Y  + S   
Sbjct: 929  GEVLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQ-YGFEDSVSV 984

Query: 653  YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
               +  M      V EA  +V +   E +++  W +++ +   HG
Sbjct: 985  ANSLISMFSSFSSVEEAC-YVFDHMNECDIIS-WNAMISAYAHHG 1027



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 3/192 (1%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L  C      + G  +H   I      ++ + T LI  Y K G +  A NVF  +PE++
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V++T M+ GY Q+G  E+A  LF  M+ CG++ +  T+ + L AC+    +D G+Q+  
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            +Q+   ++        V D   + GK+ +A      + E   V   W +++G   + G 
Sbjct: 156 CIQKGRFVENLFVKSALV-DFHSKCGKMEDASYLFGTMMERDVV--SWNAMIGGYAVQGF 212

Query: 699 SELAEVVAKKLL 710
           ++ +  + + +L
Sbjct: 213 ADDSFCMFRSML 224


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 208/602 (34%), Positives = 331/602 (54%), Gaps = 53/602 (8%)

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           ++GI  S+    + FP        K    ++G+L+K    YV   F    A+ +Y E+  
Sbjct: 392 QIGIFESSKRVFDTFP--------KPDSFMWGVLIKC---YVWGGFF-EEAVSLYHEMVY 439

Query: 279 FD---FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            D    +  +F + L+  +   +  +GG  +N    E +++F Q++  + +  D VT LS
Sbjct: 440 QDQTQISNFVFPSVLKACSGFGDLSVGG--KNGQASEGLDMFSQMIS-EAVEPDSVTMLS 496

Query: 336 ALSAVSQLQELDLGQ--------QLHAYIIK-------NFVALPVI-------------- 366
              A S+L  L LG+         +H ++I+       +F+   ++              
Sbjct: 497 VTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHK 556

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V   + E+ ++SWNT+IS F +NG  +E L+L  +MQ QG M DS ++ + LSA   +  
Sbjct: 557 VFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISF 616

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             +G Q H Y+++ G   + +++ LIDMYAK G + +A ++FEK    ++   TWN+MI 
Sbjct: 617 SQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIK--EKSLVTWNSMIC 674

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           G++QNG   EA   F QM  + V  + +T  SV+ AC+ +G +E GK +H   I Y L +
Sbjct: 675 GFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRK 734

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           + ++ T+L DMYSK G +  A  VF ++ E++ V+++ MI GYG HG     +SLF  M 
Sbjct: 735 DSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQML 794

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKV 666
           G GI+P+ ITF+ +LSACS+AG V+EG   F+ M  E+ ++P  +H+ C+ D+L R G +
Sbjct: 795 GSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDL 853

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
             AY+ +  L    N   IWG+LL  CR+H   ++ + + K LL++DT ++  GY+ LLS
Sbjct: 854 NGAYQIITSLPFPANS-SIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADT--GYYTLLS 910

Query: 727 NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           NIYAEEG W+   KVR  M+ +GLRK  G S I++   + RF   D  H Q+  IY  LE
Sbjct: 911 NIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLE 970

Query: 787 RL 788
             
Sbjct: 971 NF 972



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 221/513 (43%), Gaps = 116/513 (22%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ++++FD+  +P + +W  +I  +V      EA+ LY +M      T   N+ + SVLKAC
Sbjct: 399 SKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ-TQISNFVFPSVLKAC 457

Query: 118 A--------------------------------------------ETRNLRIGK------ 127
           +                                            E  +LR+G+      
Sbjct: 458 SGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKE 517

Query: 128 --AVHCHFIRCFSNPS-RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
             +VH   IR   +P   F+  +L+ +Y+   +  D                    KVF+
Sbjct: 518 GRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCH------------------KVFE 559

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
           T++ + +++WNT++S + +  +  EA+  F  M   G+ P + S  +   A  ++   + 
Sbjct: 560 TIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQL 619

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              ++G ++K G+   ND FV ++ I MYA+ G    A K+F+   E++   WN+MI G+
Sbjct: 620 GAQIHGYIIKTGN--FND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGF 676

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------ 358
            QN + VEAI LF Q+  ++ +  D +TFLS + A S L  L+ G+ +H  +I       
Sbjct: 677 SQNGYSVEAITLFDQMY-MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKD 735

Query: 359 --------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                           + +   V + + ER +VSW+ MI+ +  +G  +  + L  +M  
Sbjct: 736 SYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLG 795

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-----HFEGMESYLIDMYAKSG 459
            G   + +T   +LSA S+    + GK     +   G+     HF  M    +D+ +++G
Sbjct: 796 SGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACM----VDLLSRAG 851

Query: 460 LIKTARQI-----FEKNDSGDRDQATWNAMIAG 487
            +  A QI     F  N S       W A++ G
Sbjct: 852 DLNGAYQIITSLPFPANSS------IWGALLNG 878



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 152/326 (46%), Gaps = 35/326 (10%)

Query: 25  PQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           P++  L P + +L   T           G      ++F++I   T + WNT+I  F  N 
Sbjct: 532 PELDFLGPALMELYADT-----------GNLRDCHKVFETIKEKTILSWNTLISIFTRNG 580

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
            P EA+LL+ QM+        D+Y+ +S L AC      ++G  +H + I+   N + FV
Sbjct: 581 QPEEALLLFVQMQTQGLMP--DSYSLASSLSACGTISFSQLGAQIHGYIIKT-GNFNDFV 637

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L++MY+ C     A                   K+F+ ++ +++V WN+++  + + 
Sbjct: 638 QNALIDMYAKCGFVHSAN------------------KMFEKIKEKSLVTWNSMICGFSQN 679

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
              VEA+  F  M    ++   ++F++V  A S LG  +    V+  L+  G     D +
Sbjct: 680 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR--KDSY 737

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           + ++   MY++ G    A  +FD   ER+   W+ MI GY  +      I LF Q+L   
Sbjct: 738 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLG-S 796

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQ 350
            I  +D+TF+  LSA S    ++ G+
Sbjct: 797 GIKPNDITFMHILSACSHAGAVEEGK 822



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 29/255 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC---DNYT 109
           G  H A ++F+ I   + V WN++I GF  N    EAI L+ QM     Y +C   D  T
Sbjct: 649 GFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQM-----YMNCVKMDKLT 703

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           + SV++AC+    L  GK VH   I        ++  +L +MYS C              
Sbjct: 704 FLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC-------------- 749

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                +  +   VFD M  R++V+W+ +++ Y    +    +  F  ML  GI+P+ I+F
Sbjct: 750 ----GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITF 805

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +++  A S  G  +   + +  + + G E  +D F  +  + + +  G  + A +I  + 
Sbjct: 806 MHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHF--ACMVDLLSRAGDLNGAYQIITSL 863

Query: 290 -LERNTEVWNTMIGG 303
               N+ +W  ++ G
Sbjct: 864 PFPANSSIWGALLNG 878



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 180/416 (43%), Gaps = 76/416 (18%)

Query: 432 QTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q HA+L   G+H      + LI+ YA+ G+ ++++++F+       D   W  +I  Y  
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK--PDSFMWGVLIKCYVW 423

Query: 491 NGLLEEA-----------------FV----------------------------AFRQML 505
            G  EEA                 FV                             F QM+
Sbjct: 424 GGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMI 483

Query: 506 EHNVTPNVVTIASVLPACNPMGNIEL--------GKQLHGFSIRYLLDQNV-FVGTSLID 556
              V P+ VT+ SV  AC+ +G++ L        G+ +HGF IR  +D  + F+G +L++
Sbjct: 484 SEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 543

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           +Y+ +G +     VF  I EK  +++ T+I  + ++G  E AL LF  M+  G+ PD+ +
Sbjct: 544 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 603

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
             + LSAC        G QI   + +        ++   + DM  + G V  A +  +++
Sbjct: 604 LASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKI 661

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL----LEMDTRNSMPGYHVLLSNIYAEE 732
            E+   L  W S++     +G+S  A  +  ++    ++MD    +          Y E+
Sbjct: 662 KEKS--LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 719

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE-MLER 787
           G W     V  ++   GLRK+   S++D    +    SK  E   +H +++ M ER
Sbjct: 720 GKW-----VHHKLIMYGLRKD---SYLDTA--LTDMYSKCGELQMAHGVFDRMSER 765


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 232/774 (29%), Positives = 388/774 (50%), Gaps = 63/774 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
           +L ++H+L+      + P + ++L S     GRP LA   F +  RP   +WN++I    
Sbjct: 28  ELLRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHH 87

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR----CF 137
           C +    A+  + +M  S    S   +T      A AE   L +G AVH + +R      
Sbjct: 88  CASDFVAALSAHRRMLASGARPS--PFTAPLAASASAELGALGVGAAVHAYCVRYGLLVG 145

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
              S  V +SL+ MY+ C +  DA                   KVF+ M  R+VVAW  +
Sbjct: 146 DGDSVAVASSLVYMYARCGNVRDA------------------VKVFEEMPERDVVAWTAV 187

Query: 198 VSWYVKTERYVEAVRQFRMMLRMG----IRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           +S  V+     E +R    M+R+     +RP++ +  +   A   L +  S   ++G +V
Sbjct: 188 ISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVV 247

Query: 254 KLGSEYVNDLFVASSAIF-MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           K+G   + D  +  SA+F MY++    + A  +F    E++   W ++IG Y +     E
Sbjct: 248 KVG---IGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITE 304

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+ELF Q++E   +  D++     LS +     +  G+  HA I K      V++ NA+I
Sbjct: 305 AMELFQQMME-SGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALI 363

Query: 373 --------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ---KQGFMI 409
                               +RD  SWN M+  + + G D + L L  EMQ   K  F  
Sbjct: 364 SMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWC 423

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF 468
            + ++ + +S+ S L    +G+  H Y ++H +  +  + + LI MY + G    A +IF
Sbjct: 424 VADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIF 483

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                   D  TWN +I+ Y   G    A   + QML   +TPN  T+ +V+ AC  +  
Sbjct: 484 GLAKL-KGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVA 542

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E G+++H +      D +V + T+LIDMY+K G +  A  +F  + + + V +  MI G
Sbjct: 543 LERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISG 602

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           YG HG +++AL LF  M+G  I+P+ +TF+A+LSA  ++GL++EG ++F  M + Y ++P
Sbjct: 603 YGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSLEP 661

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           + +HY C+ D+LG+ G + EA + V  +  E +   IWG+LL +C+LH + E+   +AKK
Sbjct: 662 NLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDG-GIWGTLLSACKLHDNFEMGLRIAKK 720

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
               D  N   GY++L+SN Y     W+ ++K+R+ M+  G++K VG S +D G
Sbjct: 721 AFASDPENE--GYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVDYG 772


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 223/683 (32%), Positives = 353/683 (51%), Gaps = 62/683 (9%)

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV NSL   Y+   SS                 +    KVF T R R+V ++NTI+S   
Sbjct: 73  FVTNSLAARYAKSASS-----------------FPSAAKVFHTARARDVSSYNTILS--- 112

Query: 203 KTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGL-LVKLGSEYV 260
                 EA+     MLR G +RP  ++        +S G+     +V  L  +   S  V
Sbjct: 113 ALPDRGEALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLV 172

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH-PVEAIELFVQ 319
            D+FV ++ +  Y+       AR++FD    R+   WN MI G  Q+   P E I +F++
Sbjct: 173 ADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLR 232

Query: 320 VLELDEIVF--DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
           +L+        D ++  S + A     +++LG+Q+H++ +K  V   V + N ++     
Sbjct: 233 LLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYK 292

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                          ERDV+SW T IS    +G +++ + L   M++ G   + VT  AL
Sbjct: 293 SGAAGCARKLLKSMDERDVISWTTAIS---MDG-EEDAIELFNGMRQDGVPPNEVTFVAL 348

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDR 476
           +SA +       G+  H   L+ G+  E   +  LI MYAK   +  AR +F++      
Sbjct: 349 MSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPR--P 406

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL--GKQ 534
           +   WNA+I+GY QN L  EA   F  M+   + PN  T ASVL A   +  + +  G+ 
Sbjct: 407 EIIAWNALISGYAQNELCNEALQVFSCMVR-CLRPNETTFASVLSAVTAVETVSMAYGEM 465

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
            H  S++  L  + +V  +LIDMY+K G +  +   F     ++ + +T +I  + +HG 
Sbjct: 466 YHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGN 525

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
            +  ++LF  M   G+ PD +  ++VL+AC ++G V+ G +IFD M  E+ ++P  EHY 
Sbjct: 526 YDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYA 585

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
           CV DMLGR G++ EA E + ++   G  +    SLLG+CR+HG++ +AE VA  L E + 
Sbjct: 586 CVIDMLGRAGRLEEAEELMLQM-PTGPSVSALQSLLGACRIHGNTSIAERVAGILTETEP 644

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG----YVNRFAS 770
             S  G +VLLSNIYAE+G+W  V KVR+EMRE+G+RKE+G SW+D G     ++++F+S
Sbjct: 645 TES--GAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWVDFGAGESLHLHKFSS 702

Query: 771 KDQEHPQSHKIYEMLERLAMEMR 793
            D  HP + +IY + E L +E +
Sbjct: 703 DDTTHPCTEEIYRVAEGLGLETK 725



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 127/530 (23%), Positives = 220/530 (41%), Gaps = 104/530 (19%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQM-KKSSPYTSCDNYTYSSVLK 115
           AR++FD +     V WN +I G   + + P E IL++ ++ K        D  +  SV+ 
Sbjct: 194 ARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIP 253

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC     + +G+ VH   ++        + N L+ MY                    Y  
Sbjct: 254 ACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMY--------------------YKS 293

Query: 176 YDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
               C  K+  +M  R+V++W T +S     +   +A+  F  M + G+ P+ ++FV + 
Sbjct: 294 GAAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMRQDGVPPNEVTFVALM 349

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            AL++    +   +++ + +K G    ++   A+S I MYA+L   D AR +FD      
Sbjct: 350 SALAAGCPARYGQMIHTVCLKTGVS--DEAAAANSLITMYAKLRRMDDARTVFDRMPRPE 407

Query: 294 TEVWNTMIGGYVQNNHPVEAIELF---VQVLELDEIVFDDVTFLSALSAVSQL------- 343
              WN +I GY QN    EA+++F   V+ L  +E  F  V  LSA++AV  +       
Sbjct: 408 IIAWNALISGYAQNELCNEALQVFSCMVRCLRPNETTFASV--LSAVTAVETVSMAYGEM 465

Query: 344 ---QELDLGQQLHAYIIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGL 391
              Q L LG ++  Y+    + +              +  + R +++W  +ISA  ++G 
Sbjct: 466 YHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGN 525

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
            D  + L  +M   G   D V + ++L+A                  RH           
Sbjct: 526 YDTVMNLFDDMVCSGVAPDGVVLLSVLTAC-----------------RH----------- 557

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATW----NAMIAGYTQNGLLEEAFVAFRQMLEH 507
                 SG + T R+IF+   + +     W      +I    + G LEE   A   ML+ 
Sbjct: 558 ------SGAVNTGREIFDSMPA-EHHVEPWPEHYACVIDMLGRAGRLEE---AEELMLQM 607

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGF--------SIRYLLDQNVF 549
              P+V  + S+L AC   GN  + +++ G         S  Y+L  N++
Sbjct: 608 PTGPSVSALQSLLGACRIHGNTSIAERVAGILTETEPTESGAYVLLSNIY 657


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 221/752 (29%), Positives = 382/752 (50%), Gaps = 54/752 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ GR   AR +FD +     V W  ++           A+ L+++M +     
Sbjct: 100 SLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVP 159

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             + +  ++ LKAC    +L     VH   ++       +V +SL+  Y +C        
Sbjct: 160 --NGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSC-------- 209

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                 EVD ++  L+    D+  R +V +WN +++ Y +   Y + +  F  ++  G  
Sbjct: 210 -----GEVDVAERALL----DSPVRSDV-SWNALLNEYARDGDYAKVMLVFDKLVESGDE 259

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            S  +   V      LG  KS   V+GL++K G E   D  + +  I MY++    + A 
Sbjct: 260 ISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLE--TDRVLNNCLIEMYSKCLSAEDAY 317

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F    E +    + MI  + +++   EA ++F+Q+ ++  +  +  TF+      S+ 
Sbjct: 318 EVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG-VKPNQYTFVGLAIVASRT 376

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMI 383
            +++L + +HA+I+K+  +    V +A++                      D+ SWNT++
Sbjct: 377 GDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLL 436

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S F      + GL +  E+  +G + +  T   +L   ++L +   G Q HA +L+ G  
Sbjct: 437 SGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSG-- 494

Query: 444 FEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           F+G   +   L+DMY ++G    AR +F++    +RD  +W  +++ Y +    E+A   
Sbjct: 495 FQGDYDVSKMLLDMYVQAGCFTNARLVFDRLK--ERDVFSWTVVMSTYAKTDEGEKAIEC 552

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           FR ML  N  PN  T+A+ L  C+ +  +  G QLH ++I+   + +V V ++L+DMY K
Sbjct: 553 FRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVK 611

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  A  +F +    + V + T+I GY QHG   +AL  F+ M   G  PD ITFV V
Sbjct: 612 CGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGV 671

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACS+AGL+DEG + F L+   Y I P+ EHY C+ D+L + GK+ EA   + E+    
Sbjct: 672 LSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTP 731

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +   +W ++LG+CR+HG+ E+AE  A+KL E  ++       +LLSNIYA+   W +V K
Sbjct: 732 DA-SLWKTILGACRMHGNIEIAERAAEKLFE--SQPDDISSCILLSNIYADLKRWNDVAK 788

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           +R  + +RG++KE GCSWI++ G ++ F S+D
Sbjct: 789 LRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/615 (25%), Positives = 269/615 (43%), Gaps = 56/615 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y++ L+ CA +R LR GKA+H   +R    P  F+++SLLNMY  C    DA       
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADAR------ 115

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        VFD M  R+VVAW  +VS          A+R F  M   G+ P+  +
Sbjct: 116 ------------SVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFA 163

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
                 A +   D      V+   VKL  E + D +V+SS +  Y   G  D A +   +
Sbjct: 164 LAAALKACTVGSDLGFTPQVHAQAVKL--EGLFDPYVSSSLVEAYVSCGEVDVAERALLD 221

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-DEIVFDDVTFLSALSAVSQLQELD 347
              R+   WN ++  Y ++    + + +F +++E  DEI     T  + L    +L    
Sbjct: 222 SPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEI--SKYTLPTVLKCCMELGLAK 279

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFV 387
            GQ +H  +IK  +    ++ N +IE                     DVV  + MIS F 
Sbjct: 280 SGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFD 339

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEG 446
           ++ +  E   +  +M   G   +  T   L   AS   + ++ +  HA++++ G    +G
Sbjct: 340 RHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKG 399

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +   ++ MY K+G ++ A   F+       D A+WN +++G+      E     F++++ 
Sbjct: 400 VCDAIVGMYVKTGAVQDAILAFDLMQG--PDIASWNTLLSGFYSGNNCEHGLRIFKELIC 457

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V  N  T   +L  C  + ++  G Q+H   ++     +  V   L+DMY ++G    
Sbjct: 458 EGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTN 517

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF ++ E++  ++T ++  Y +    E+A+  FRSM      P+  T    LS CS 
Sbjct: 518 ARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSD 577

Query: 627 AGLVDEGLQIFDLMQQEYKIQP---STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
              +  GLQ+       Y I+    S+     + DM  + G + +A E + +  +  +++
Sbjct: 578 LACLGSGLQL-----HSYTIKSGWNSSVVSSALVDMYVKCGNLADA-EMLFDESDTHDLV 631

Query: 684 EIWGSLLGSCRLHGH 698
           E W +++     HGH
Sbjct: 632 E-WNTIICGYAQHGH 645


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 179/425 (42%), Positives = 268/425 (63%), Gaps = 8/425 (1%)

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           RD  SWN MIS + QNG   E L +  EM+ +G  +D++TV ++L   + + +   GK  
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y+++HG+ FE  + + LI+MYAK G +  A+++F       +D  +WN +I GY QNG
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF---GLLIKDVVSWNTLITGYAQNG 174

Query: 493 LLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           L  EA   +  M EH  + PN  T  S+LPA + +G ++ G ++HG  I+  L  +VFVG
Sbjct: 175 LASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG 234

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           T LIDMY K G ++ A ++F ++P KNSV +  MI  YG HG  E+AL LFR MK   ++
Sbjct: 235 TCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVK 294

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD ITFV++LSACS++GLV +    F++M++EY I+PS +HY C+ D+ GR G++  A+ 
Sbjct: 295 PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFN 354

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
           F+K++  + +    WG+LL +CR+HG+ EL +  +++L E+D+ N   GY+VLLSNIYA 
Sbjct: 355 FIKKMPIQPDA-SAWGALLNACRIHGNIELGKHASERLFEVDSENV--GYYVLLSNIYAN 411

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G WE VD VR   R+RGLRK  G S I +   V+ F + +Q HP+  +IY  L  L  +
Sbjct: 412 VGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSK 471

Query: 792 MRNAG 796
           ++  G
Sbjct: 472 IKTIG 476



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 205/428 (47%), Gaps = 73/428 (17%)

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           P + + GD      ++ L++KLG E+  D+FVA+S + MY+  G    ARK+FD+   R+
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEW--DVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI GY QN +  EA+++    + L+ +  D +T  S L   +Q+ ++  G+ +H
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDI-ADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIH 118

Query: 354 AYIIKNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDE 394
            Y+IK+ +   + V NA+I                    +DVVSWNT+I+ + QNGL  E
Sbjct: 119 LYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASE 178

Query: 395 GLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESY 450
            + +   M++   +I +  T  ++L A S++     G + H  ++++ ++   F G  + 
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVG--TC 236

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMY K G +  A  +F +     ++   WNAMI+ Y  +G  E+A   FR+M    V 
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPR--KNSVPWNAMISCYGVHGDGEKALELFREMKAERVK 294

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+ +T  S+L AC                                   S SG+++ A   
Sbjct: 295 PDHITFVSLLSAC-----------------------------------SHSGLVSDAQWC 319

Query: 571 FAKIPEKNSVT-----YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           F  + E+  +      Y  M+  +G+ G  E A +  + M    I+PDA  + A+L+AC 
Sbjct: 320 FNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACR 376

Query: 626 YAGLVDEG 633
             G ++ G
Sbjct: 377 IHGNIELG 384



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 199/445 (44%), Gaps = 84/445 (18%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC +   L  GK +HC  ++       FV  SL++MYS      DA           
Sbjct: 3   VVKACGD---LLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDAR---------- 49

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   K+FD M  R+  +WN ++S Y +     EA+     M   G++   I+  +V
Sbjct: 50  --------KLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASV 101

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + +GD  S  +++  ++K G E+  +LFV+++ I MYA+ G    A+K+F   L +
Sbjct: 102 LPVCAQVGDILSGKLIHLYVIKHGLEF--ELFVSNALINMYAKFGSLGHAQKVF-GLLIK 158

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT+I GY QN    EAIE+++ + E +EI+ +  T++S L A S +  L  G ++
Sbjct: 159 DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  +IKN +   V V   +I+                    ++ V WN MIS +  +G  
Sbjct: 219 HGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDG 278

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI 452
           ++ L L  EM+ +    D +T  +LLSA S+                             
Sbjct: 279 EKALELFREMKAERVKPDHITFVSLLSACSH----------------------------- 309

Query: 453 DMYAKSGLIKTARQIF---EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
                SGL+  A+  F   E+          +  M+  + + G LE AF   ++M    +
Sbjct: 310 -----SGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKM---PI 361

Query: 510 TPNVVTIASVLPACNPMGNIELGKQ 534
            P+     ++L AC   GNIELGK 
Sbjct: 362 QPDASAWGALLNACRIHGNIELGKH 386



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 158/275 (57%), Gaps = 8/275 (2%)

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           GK+ H  +L+ G  ++  + + L+ MY++ GL+  AR++F+  D   RD+ +WNAMI+GY
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFD--DMPARDRGSWNAMISGY 70

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            QNG   EA     +M    V  + +T+ASVLP C  +G+I  GK +H + I++ L+  +
Sbjct: 71  CQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           FV  +LI+MY+K G + +A  VF  +  K+ V++ T+I GY Q+G++  A+ ++  M+  
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189

Query: 609 -GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
             I P+  T+V++L A S+ G + +G++I   + +   +        C+ DM G+ GK+ 
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNC-LYSDVFVGTCLIDMYGKCGKLD 248

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +A     ++  + +V   W +++    +HG  E A
Sbjct: 249 DAISLFYQVPRKNSV--PWNAMISCYGVHGDGEKA 281



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 215/487 (44%), Gaps = 47/487 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +       WN +I G+  N    EA+ +  +M+        D  T +SVL  C
Sbjct: 48  ARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEG--VKMDAITVASVLPVC 105

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+  ++  GK +H + I+       FV N+L+NMY+             K+  + +++  
Sbjct: 106 AQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYA-------------KFGSLGHAQ-- 150

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPAL 236
              KVF  +  ++VV+WNT+++ Y +     EA+  + +M     I P+  ++V++ PA 
Sbjct: 151 ---KVFGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAY 206

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S +G  +    ++G ++K  +   +D+FV +  I MY + G  D A  +F     +N+  
Sbjct: 207 SHVGALQQGMRIHGQVIK--NCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVP 264

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN MI  Y  +    +A+ELF + ++ + +  D +TF+S LSA S    +   Q     +
Sbjct: 265 WNAMISCYGVHGDGEKALELFRE-MKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMM 323

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            + +   P           +  +  M+  F + G  +     + +M  Q    D+    A
Sbjct: 324 EEEYGIKP----------SLKHYGCMVDLFGRAGELEMAFNFIKKMPIQP---DASAWGA 370

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE-KNDSGD 475
           LL+A     N ++GK     L        G    L ++YA  G  +    +     D G 
Sbjct: 371 LLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGL 430

Query: 476 RDQATWNAMIAG------YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           R    W+++I        YT N    +    +R++   ++T  + TI  V   C  + ++
Sbjct: 431 RKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYREL--RDLTSKIKTIGYVPDFCFVLQDV 488

Query: 530 ELGKQLH 536
           E  ++ H
Sbjct: 489 EEDEKEH 495


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 187/556 (33%), Positives = 309/556 (55%), Gaps = 28/556 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +  + MYA+L   + A+ I +    R+   W  +I G VQN   V A+  F  +L  
Sbjct: 43  FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLS- 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----------- 366
           D +  +D TF   L A + L+    G+QLHA  +K       FV   V            
Sbjct: 102 DCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLND 161

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V + +  R++ +WN  IS  V +G  ++ ++   E+ + G   DS+T  A L+A S+
Sbjct: 162 AYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSD 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
                 G Q H +++R G      + + LID Y K G ++ +  +F++   G+R+  +W+
Sbjct: 222 KLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR--MGERNSVSWS 279

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           ++IA Y QN   E+A   F +  + ++ P    ++SVL AC  +  IE G+ +   +++ 
Sbjct: 280 SLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKA 339

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            ++QN+FV ++L+DMY K G I+ A   F  +PE+N V++  ++ GY   G + +A++L 
Sbjct: 340 CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALL 399

Query: 603 RSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
             M    GI P  ++ +  LSACS AG +  G++IF+ M++ Y ++P  EHY C+ D+LG
Sbjct: 400 EEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLG 459

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G V  AY+F+K +     +  IWG+LLG+CR+HG  EL ++ A+KL E+D ++S  G 
Sbjct: 460 RAGMVECAYDFIKRMPFPPTI-SIWGALLGACRMHGKPELGKLAAEKLFELDPKDS--GN 516

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           HV+LSN++A  G WE V  VR EM+E G++K  G SWI V   ++ F +KD+ H +  +I
Sbjct: 517 HVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEI 576

Query: 782 YEMLERLAMEMRNAGN 797
            ++L +L  EM++A  
Sbjct: 577 QDILGKLRKEMQDAAG 592



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 240/513 (46%), Gaps = 48/513 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + +SV++     R+  +G+A H   ++    P   F+YN L+NMY+  L  L++  + L+
Sbjct: 8   SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAK-LDHLNSAKLILE 66

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                                R+VV W  +++  V+   +V A+  F  ML   +RP+  
Sbjct: 67  LAPC-----------------RSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDF 109

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V  A + L    +   ++ L VK G   +ND+FV  S   MY++LG  + A K+FD
Sbjct: 110 TFPCVLKASTGLRMDTTGKQLHALAVKEG--LINDVFVGCSVFDMYSKLGFLNDAYKVFD 167

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               RN E WN  I   V +  P +++  F+++L +     D +TF + L+A S    L 
Sbjct: 168 EMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKP-DSITFCAFLNACSDKLGLG 226

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G QLH +II++     V V N +I                    ER+ VSW+++I+A+V
Sbjct: 227 PGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYV 286

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           QN  +++   L    +K+        V+++L A + L   + G+   A  ++  +     
Sbjct: 287 QNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIF 346

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S L+DMY K G I  A Q F  N   +R+  +WNA++ GY   G   +A     +M  
Sbjct: 347 VASALVDMYGKCGSIDNAEQAF--NAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTS 404

Query: 507 -HNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              + P+ V++   L AC+  G+++ G K       RY ++        L+D+  ++G++
Sbjct: 405 AAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMV 464

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSE 596
             A +   ++P   +++    +LG  + HG  E
Sbjct: 465 ECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 143/283 (50%), Gaps = 9/283 (3%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEG-MESYLIDMYAKSGLIKTARQIFEK 470
           ++ +++  A ++R+  +G+  HA +L+     F   + ++L++MYAK   + +A+ I E 
Sbjct: 8   SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
                R   TW A+IAG  QNG    A + F  ML   V PN  T   VL A   +    
Sbjct: 68  APC--RSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDT 125

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GKQLH  +++  L  +VFVG S+ DMYSK G +N A  VF ++P +N  T+   I    
Sbjct: 126 TGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSV 185

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPS 649
            HG  E ++  F  +   G +PD+ITF A L+ACS    +  G Q+   +++  Y    S
Sbjct: 186 LHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS 245

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             +   + D  G+ G+V  +      +GE  +V   W SL+ +
Sbjct: 246 VSNG--LIDFYGKCGEVECSEMVFDRMGERNSV--SWSSLIAA 284



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 22/295 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +       WN  I   V +  P ++++ + ++ +       D+ T+ + L AC
Sbjct: 162 AYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKP--DSITFCAFLNAC 219

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L  G  +H   IR     +  V N L++ Y  C     +EMV             
Sbjct: 220 SDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMV------------- 266

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD M  RN V+W+++++ YV+     +A   F    +  I P+     +V  A +
Sbjct: 267 -----FDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L + +    V  L VK   E   ++FVAS+ + MY + G  D A + F+   ERN   W
Sbjct: 322 GLSEIEFGRSVQALAVKACVE--QNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSW 379

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N ++GGY    H  +A+ L  ++     IV   V+ + ALSA S+  +L  G ++
Sbjct: 380 NALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 21/198 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    +  +FD +    +V W+++I  +V NN   +A  L+ + +K     +  ++  SS
Sbjct: 258 GEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPT--DFMVSS 315

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA    +  G++V    ++     + FV ++L++MY  C S  +AE          
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAE---------- 365

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVN 231
                   + F+ M  RN+V+WN ++  Y       +AV     M    GI PS +S + 
Sbjct: 366 --------QAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLIC 417

Query: 232 VFPALSSLGDYKSADVVY 249
              A S  GD K+   ++
Sbjct: 418 ALSACSRAGDLKTGMKIF 435


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 206/622 (33%), Positives = 330/622 (53%), Gaps = 45/622 (7%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           MLR G    +  +V +       G   +A  ++G +VK G+    D+FVA+S + +Y   
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGT--AADMFVATSLVNVYMRC 124

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
                AR++FD   ++N   W  +I G+  N+ P  A+E+FV++LEL        T    
Sbjct: 125 ASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYP-SHYTLGGM 183

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           LSA S  + +DLGQQ+H Y IK        + N++                     +++V
Sbjct: 184 LSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNV 243

Query: 377 VSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           ++W TMIS+  ++    D GL L  +M + G M +  T+T+++S      +  +GKQ  A
Sbjct: 244 ITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 303

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ---- 490
           +  + G      +++  + +Y + G    A ++FE+ DS      TWNAMI+GY Q    
Sbjct: 304 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSS--IITWNAMISGYAQIMDS 361

Query: 491 ---------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
                     G   +A   FR ++   + P++ T +S+L  C+ M  +E G+Q+H  +I+
Sbjct: 362 AKDDLHARSRGF--QALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIK 419

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
                +V V ++L++MY+K G I  A   F ++P +  VT+T+MI GY QHG S+ A+ L
Sbjct: 420 TGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQL 479

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  M   G  P+ ITFV++LSACSYAGLV+E  + FD+M+ EY I+P  +HY C+ DM  
Sbjct: 480 FEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFV 539

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R+G++ +A+ F+K  G E N   IW SL+  CR HG+ ELA   A +LLE+  +  +   
Sbjct: 540 RLGRLDDAFSFIKRTGFEPNE-AIWSSLVAGCRSHGNMELAFYAADRLLELKPK--VIET 596

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           +VLL N+Y   G W +V +VRK  +   +      SWI +   V  F + D  HPQ+ ++
Sbjct: 597 YVLLLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATEL 656

Query: 782 YEMLERLAMEMRNAGNKTIQNS 803
           Y++LE L  + +  G +  QN+
Sbjct: 657 YQLLENLLEKAKAVGYEPYQNA 678



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 250/553 (45%), Gaps = 69/553 (12%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L  C E   L   +A+H H ++  +    FV  SL+N+Y  C SS DA        
Sbjct: 79  YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDAR------- 131

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      ++FD M  +NVV W  +++ +        A+  F  ML +G  PS  + 
Sbjct: 132 -----------RLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTL 180

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  A S+         V+G  +K G++ +  +   +S   +Y + G  +   + F   
Sbjct: 181 GGMLSACSAARRIDLGQQVHGYSIKYGADTITSM--GNSLCRLYCKSGDLESGLRAFKGT 238

Query: 290 LERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            ++N   W TMI    ++ + ++  + LF+ +LE   ++ ++ T  S +S      ++ L
Sbjct: 239 PDKNVITWTTMISSCAEDENYLDLGLSLFLDMLE-GGVMPNEFTLTSVMSLCGARLDMSL 297

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI-------ERD-------------VVSWNTMISAFVQ 388
           G+Q+ A+  K      + V N+ +       E D             +++WN MIS + Q
Sbjct: 298 GKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQ 357

Query: 389 ---NGLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
              +  DD        + L L  ++ +     D  T +++LS  S +   + G+Q HA  
Sbjct: 358 IMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANT 417

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   +  + S L++MY K G I+ A + F +  +  R   TW +MI+GY+Q+G  ++
Sbjct: 418 IKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPT--RTPVTWTSMISGYSQHGRSQD 475

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVFVG 551
           A   F  M+     PN +T  S+L AC+  G +E  ++      + + I  L+D      
Sbjct: 476 AIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHY---- 531

Query: 552 TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             ++DM+ + G ++ A +   +   E N   +++++ G   HG  E  L+ + + +   +
Sbjct: 532 GCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADRLLEL 589

Query: 611 EPDAI-TFVAVLS 622
           +P  I T+V +L+
Sbjct: 590 KPKVIETYVLLLN 602



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 226/494 (45%), Gaps = 66/494 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V W  +I G   N+ P  A+ ++ +M +   Y S  +YT   +L AC
Sbjct: 130 ARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPS--HYTLGGMLSAC 187

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  R + +G+ VH + I+  ++    + NSL  +Y  C S  D E  GL           
Sbjct: 188 SAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLY--CKSG-DLE-SGL----------- 232

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVNVFPAL 236
              + F     +NV+ W T++S   + E Y++  +  F  ML  G+ P+  +  +V    
Sbjct: 233 ---RAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLC 289

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +  D      V     K+G E   +L V +S +++Y   G  D A ++F+     +   
Sbjct: 290 GARLDMSLGKQVQAFCYKVGCE--ANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIIT 347

Query: 297 WNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           WN MI GY Q            +   +A++LF  ++   E+  D  TF S LS  S +  
Sbjct: 348 WNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVR-SELKPDLFTFSSILSVCSAMMA 406

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L+ G+Q+HA  IK      V+V +A++                     R  V+W +MIS 
Sbjct: 407 LEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISG 466

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY--LLRHGIH 443
           + Q+G   + + L  +M   G   + +T  +LLSA S      + ++   Y  ++R+  H
Sbjct: 467 YSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACS---YAGLVEEAERYFDMMRNEYH 523

Query: 444 FEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
            E +  +   ++DM+ + G +  A   F K    + ++A W++++AG   +G +E AF A
Sbjct: 524 IEPLVDHYGCMVDMFVRLGRLDDAFS-FIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYA 582

Query: 501 FRQMLEHNVTPNVV 514
             ++LE  + P V+
Sbjct: 583 ADRLLE--LKPKVI 594



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 37/309 (11%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A +LF+ +   + + WN +I G+              +  ++
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQ 374

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ L+  + +S      D +T+SS+L  C+    L  G+ +H + I+        V ++L
Sbjct: 375 ALKLFRDLVRSE--LKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSAL 432

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C S                   +   K F  M  R  V W +++S Y +  R  
Sbjct: 433 VNMYNKCGS------------------IECATKAFVEMPTRTPVTWTSMISGYSQHGRSQ 474

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           +A++ F  M+  G RP+ I+FV++  A S  G  + A+  + ++    +EY  +  V   
Sbjct: 475 DAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMR---NEYHIEPLVDHY 531

Query: 267 SSAIFMYAELGCFDFARKIFDNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
              + M+  LG  D A         E N  +W++++ G   + +   A     ++LEL  
Sbjct: 532 GCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKP 591

Query: 326 IVFDDVTFL 334
            V +    L
Sbjct: 592 KVIETYVLL 600


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 229/760 (30%), Positives = 391/760 (51%), Gaps = 49/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LFD++     V W++++  +  +    EA+LL+ +  +S      + Y  +SV++AC
Sbjct: 106 AQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKP-NEYILASVVRAC 164

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +  NL     +H   ++       +V  SL++ Y+             K   VD ++  
Sbjct: 165 TQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYA-------------KRGYVDEARL- 210

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD ++ +  V W  I++ Y K  R   +++ F  M    + P      +V  A S
Sbjct: 211 ----IFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACS 266

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    ++G +++ G +   D+ V +  I  Y +       RK+F+  ++++   W
Sbjct: 267 MLEFLEGGKQIHGYVLRRGFDM--DVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSW 324

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            TMI G +QN+   +A++LFV+++       D     S L++   LQ L  G+Q+HAY I
Sbjct: 325 TTMIAGCMQNSFHGDAMDLFVEMVR-KGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAI 383

Query: 358 K------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K      +FV   +I              V + V   +VVS+N MI  + +     E L 
Sbjct: 384 KVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALD 443

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
           L  EM+        +T  +LL  +S+L   ++  Q H  +++ G+  +    S LID+Y+
Sbjct: 444 LFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYS 503

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K   +  AR +FE  +  DRD   WNAM +GY+Q    EE+   ++ +    + PN  T 
Sbjct: 504 KCSCVGDARLVFE--EIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTF 561

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A+V+ A + + ++  G+Q H   I+  LD + FV  SL+DMY+K G I  +   F+   +
Sbjct: 562 AAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQ 621

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++   + +MI  Y QHG + +AL +F  M   G++P+ +TFV +LSACS+AGL+D G   
Sbjct: 622 RDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHH 681

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M + + I+P  +HY C+  +LGR GK+ EA EFVK++  +   + +W SLL +CR+ 
Sbjct: 682 FESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAV-VWRSLLSACRVS 739

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           GH EL    A+  +  D  +S  G ++LLSNI+A +G W +V  VR++M    + KE G 
Sbjct: 740 GHVELGTYAAEMAISCDPADS--GSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGW 797

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           SWI+V   V+RF ++D  H  S  I  +L+ L ++++  G
Sbjct: 798 SWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFG 837



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 193/392 (49%), Gaps = 24/392 (6%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  +V LG  + +D+F+ ++ +  Y+++     A+K+FD    RN   W++M+  Y Q+
Sbjct: 73  IHAHIVVLGF-HQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQH 131

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
            + VEA+ LF + +       ++    S + A +QL  L    QLH +++K      V V
Sbjct: 132 GYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYV 191

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
             ++I+                    +  V+W  +I+ + + G  +  L L  +M++   
Sbjct: 192 GTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDV 251

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             D   ++++LSA S L   + GKQ H Y+LR G   +  + + +ID Y K   +KT R+
Sbjct: 252 YPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRK 311

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F  N   D+D  +W  MIAG  QN    +A   F +M+     P+     SVL +C  +
Sbjct: 312 LF--NRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSL 369

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             ++ G+Q+H ++I+  +D + FV   LIDMY+K   +  A  VF  +   N V+Y  MI
Sbjct: 370 QALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMI 429

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            GY +      AL LFR M+     P  +TFV
Sbjct: 430 EGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 224/698 (32%), Positives = 369/698 (52%), Gaps = 61/698 (8%)

Query: 121 RNLRIGKA-VHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           R L I  A  H   ++ C  +P+R  +N LL  YS  LS L     GL            
Sbjct: 3   RRLTIAAAKSHATLLKSCIISPTR--WNQLLTAYS--LSPL-----GLAAAR-------- 45

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VFD + R +  +WN++++ +V    +  A    R M   G+  +T +  +   + ++
Sbjct: 46  --RVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAA 103

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
                    +  L  K G    +++F AS+ + MYA+ G    AR++FD   ERNT  WN
Sbjct: 104 ARCPALGAQLQSLAFKSG--LADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWN 161

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I GYV++   ++A+ELF+  +E + +V D+ TF + L+A        L  QLH  I+K
Sbjct: 162 ALIAGYVESGKVLQALELFIN-METERLVPDEATFAALLTAFDDSNYF-LMHQLHGKIVK 219

Query: 359 NFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGL- 396
              AL + V NA I                      RD++SWN M+ A+  +G+D + + 
Sbjct: 220 YGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMG 279

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---SYLID 453
             V  +++ G  +D  + T+++S      +   G+  H  ++++G+  EG     + LI 
Sbjct: 280 FFVRMIRESGVQLDMYSFTSIISTCPE-HDDHQGRAIHGLVIKNGL--EGATPVCNALIA 336

Query: 454 MYAK-SG--LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           MY + SG  +++ A + F+      +D  +WN+M+ GY+Q+ L  +A   FR M   N+ 
Sbjct: 337 MYTRISGNCMMEDACKCFDSLLI--KDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIR 394

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            +    ++ L +C+ +  ++LG+Q+HG  I      N FV +SLI MYSKSG+++ A   
Sbjct: 395 CDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKS 454

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F +  + +SV + +MI GY QHG +    SLF  M    +  D +TFV ++++CS+AGLV
Sbjct: 455 FEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLV 514

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           DEG +I + M+  Y I    EHY C  D+ GR G++ +A E +  +  E + + +W +LL
Sbjct: 515 DEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAM-VWMTLL 573

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           G+CR+HG+ ELA  VA  LL  + +      ++LLS++Y+  G W +   V++EM+ RGL
Sbjct: 574 GACRIHGNMELASEVASHLLVSEPKQH--STYILLSSMYSGLGMWSDRAIVQREMKNRGL 631

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
            K  G SWI+V   V+ F ++D+ HP+  +IYEML  L
Sbjct: 632 SKVPGWSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLL 669



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 255/568 (44%), Gaps = 53/568 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I RP    WN+++   V       A  L   M       + + +   S L++ 
Sbjct: 44  ARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQG--VAANTFALGSSLRSA 101

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  R   +G  +     +     + F  ++LL+MY+ C    DA                
Sbjct: 102 AAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDAR--------------- 146

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RN V+WN +++ YV++ + ++A+  F  M    + P   +F  +  A  
Sbjct: 147 ---RVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFD 203

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
              +Y     ++G +VK GS     L V+++AI  Y++ G    +R+IFD   + R+   
Sbjct: 204 D-SNYFLMHQLHGKIVKYGSAL--GLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLIS 260

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN M+G Y  +    +A+  FV+++    +  D  +F S +S   +  +   G+ +H  +
Sbjct: 261 WNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLV 319

Query: 357 IKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLDD 393
           IKN +     V NA+I                        +D VSWN+M++ + Q+ L  
Sbjct: 320 IKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSA 379

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           + L     MQ      D    +A L + S L    +G+Q H  ++  G      + S LI
Sbjct: 380 DALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLI 439

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY+KSG++  A++ FE+ D G      WN+MI GY Q+G        F +M+E  V  +
Sbjct: 440 FMYSKSGILDDAKKSFEEADKG--SSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLD 497

Query: 513 VVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT   ++ +C+  G ++ G + L+    RY +   +      +D+Y ++G +  A  + 
Sbjct: 498 HVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELI 557

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSERA 598
             +P E +++ + T++     HG  E A
Sbjct: 558 DSMPFEPDAMVWMTLLGACRIHGNMELA 585



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 217/471 (46%), Gaps = 51/471 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   AR++FD +    TV WN +I G+V +    +A+ L+  M+        D  T+++
Sbjct: 140 GRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVP--DEATFAA 197

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A  ++ N  +   +H   ++  S     V N+ +  YS C +  ++           
Sbjct: 198 LLTAFDDS-NYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESR---------- 246

Query: 173 YSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                   ++FD +   R++++WN ++  Y       +A+  F RM+   G++    SF 
Sbjct: 247 --------RIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFT 298

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-FDFARKIFDNC 289
           ++        D++    ++GL++K G E    +  A  A++      C  + A K FD+ 
Sbjct: 299 SIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSL 357

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L ++T  WN+M+ GY Q+N   +A+  F + ++   I  D+  F +AL + S+L  L LG
Sbjct: 358 LIKDTVSWNSMLTGYSQHNLSADALRFF-RCMQSANIRCDEYAFSAALRSCSELAVLQLG 416

Query: 350 QQLHAYII------KNFVALPVIVL-----------NAVIERD---VVSWNTMISAFVQN 389
           +Q+H  II       NFV+  +I +            +  E D    V WN+MI  + Q+
Sbjct: 417 RQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQH 476

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME 448
           G       L  EM +    +D VT   L+++ S+    D G +  +A   R+GI    ME
Sbjct: 477 GHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLR-ME 535

Query: 449 SYL--IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
            Y   +D+Y ++G ++ A+++ +     + D   W  ++     +G +E A
Sbjct: 536 HYACGVDLYGRAGQLEKAKELIDSMPF-EPDAMVWMTLLGACRIHGNMELA 585


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 194/603 (32%), Positives = 330/603 (54%), Gaps = 35/603 (5%)

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           +P+  +F  V  A S+L D +SA  V+    + G     DLFV+++ + +YA+   F  A
Sbjct: 126 QPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLH--ADLFVSTALVDVYAKCASFRHA 183

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             +F     R+   WN M+ GY  +    + I   +  L  D+   +  T ++ L  ++Q
Sbjct: 184 ATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLL--LMQDDHAPNASTLVALLPLLAQ 241

Query: 343 LQELDLGQQLHAYIIKN----------FVALPVI--------------VLNAVIERDVVS 378
              L  G+ +HAY ++            V   ++              V  A+  R+ V+
Sbjct: 242 HGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVT 301

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGF-MIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           W+ ++  FV  G   E   L  +M  QG   +   +V + L A +NL +  +GKQ HA L
Sbjct: 302 WSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALL 361

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
            + G+H +    + L+ MYAK+GLI  A  +F++     +D  +++A+++GY QNG  +E
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVV--KDTVSYSALVSGYVQNGKADE 419

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
           AF  FR+M   NV P+V T+ S++PAC+ +  ++ GK  HG  I   +     +  +LID
Sbjct: 420 AFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALID 479

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY+K G I+ +  +F  +P ++ V++ TMI GYG HG+ + A +LF  MK    EPD +T
Sbjct: 480 MYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVT 539

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           F+ ++SACS++GLV EG + F +M  +Y I P  EHY  + D+L R G + EAY+F++ +
Sbjct: 540 FICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGM 599

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
             + +V  +WG+LLG+CR+H + +L + V+  + ++    +  G  VLLSNI++  G ++
Sbjct: 600 PLKADV-RVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGT--GNFVLLSNIFSAAGRFD 656

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              +VR   +E+G +K  GCSWI++ G ++ F   D+ H QS +IY+ L+ + +++   G
Sbjct: 657 EAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLG 716

Query: 797 NKT 799
            + 
Sbjct: 717 YRA 719



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 195/746 (26%), Positives = 324/746 (43%), Gaps = 122/746 (16%)

Query: 13  PPPTAT---PPPPQLPQIHS--------------------LSPPIPKLKTPTIRSRLSKI 49
           PPP  T   PP P  PQ H                     L+   P +      +R+  I
Sbjct: 18  PPPFCTILRPPAPSAPQHHRVRHRTSSTSSSTTSSLLIFMLNINFPHIICQIDHNRM--I 75

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C  G   LAR LFD I  P    +N +I  +          L  S  ++  P    +NYT
Sbjct: 76  C--GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQP--NNYT 131

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  VLKAC+   +LR  +AVHCH  R   +   FV  +L+++Y+ C S   A        
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAA------- 184

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF  M  R+VVAWN +++ Y    +Y + +    ++++    P+  + 
Sbjct: 185 -----------TVFRRMPARDVVAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTL 232

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGS--EYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           V + P L+  G       V+   V+  S  ++ + + V ++ + MYA+ G   +A ++F+
Sbjct: 233 VALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFE 292

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               RN   W+ ++GG+V     +EA  LF  +L          +  SAL A + L +L 
Sbjct: 293 AMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLC 352

Query: 348 LGQQLHAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFV 387
           LG+QLHA + K+                     +     + + ++ +D VS++ ++S +V
Sbjct: 353 LGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYV 412

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           QNG  DE   +  +MQ      D  T+ +L+ A S+L     GK  H  ++  GI  E  
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + LIDMYAK G I  +RQIF+   +  RD  +WN MIAGY  +GL +EA   F  M  
Sbjct: 473 ICNALIDMYAKCGRIDLSRQIFDVMPA--RDIVSWNTMIAGYGIHGLGKEATALFLDMKH 530

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
               P+ VT   ++ AC+  G +  GK+  H  + +Y +   +     ++D+ ++ G ++
Sbjct: 531 QACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLD 590

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A                                  ++ ++G  ++ D   + A+L AC 
Sbjct: 591 EA----------------------------------YQFIQGMPLKADVRVWGALLGACR 616

Query: 626 YAGLVDEGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG---- 680
               +D G Q+  ++QQ   + P  T ++  ++++    G+  EA E      E+G    
Sbjct: 617 VHKNIDLGKQVSSMIQQ---LGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673

Query: 681 ---NVLEIWGSL---LGSCRLHGHSE 700
              + +EI GSL   +G  R H  S 
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQSS 699


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 215/665 (32%), Positives = 333/665 (50%), Gaps = 83/665 (12%)

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
           L+ Q     PY    N+   ++L  C   +NL   K +H   I+   + ++F  + L+  
Sbjct: 17  LHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEF 73

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
              C  S              +        +F+++ + N   WNT++     +   V A+
Sbjct: 74  ---CAIS-------------PFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAI 117

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
             +  ML  G+ P++ +F  +  + + +G  +    ++G ++KLG E  +D FV +S I 
Sbjct: 118 DFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE--SDPFVHTSLIN 175

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MYA+ G   +A  +F     R+   +  +I GY       +A  LF ++           
Sbjct: 176 MYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEI----------- 224

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
                                           PV        RD VSWN MI+ + Q+G 
Sbjct: 225 --------------------------------PV--------RDAVSWNAMIAGYAQSGR 244

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
            +E L    EM++     +  T+  +LSA +   + ++G    +++  HG+     + + 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMY+K G +  AR +FE     ++D  +WN MI GY+     +EA   FR+M + NV 
Sbjct: 305 LIDMYSKCGDLDKARDLFE--GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVE 362

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           PN VT  S+LPAC  +G ++LGK +H +   ++L   N  + TSLIDMY+K G I  A  
Sbjct: 363 PNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQ 422

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VFA +  K+  ++  MI G   HG +  AL LFR M+  G EPD ITFV VLSACS+AGL
Sbjct: 423 VFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGL 482

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--ELGEEGNVLEIWG 687
           V+ G Q F  M ++Y I P  +HY C+ D+LGR G   EA   +K  E+  +G    IWG
Sbjct: 483 VELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDG---AIWG 539

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           SLLG+CR+HG+ EL E  AK L E++  N  PG +VLLSNIYA  G W++V ++R ++ +
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPEN--PGAYVLLSNIYATAGRWDDVARIRTKLND 597

Query: 748 RGLRK 752
           +G++K
Sbjct: 598 KGMKK 602



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 281/651 (43%), Gaps = 129/651 (19%)

Query: 1   MASSSVPLPLPPPP----PTATPP-------PP-----------QLPQIHSLSPPIPKLK 38
           +AS S  L +PPP     PT+ PP       P             L QIHS         
Sbjct: 3   LASFSPSLVMPPPTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHN 62

Query: 39  TPTIRSRLSKICQ---EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           T    S+L + C     G    A  LF+SI +P   IWNT+I G   ++ P  AI  Y +
Sbjct: 63  TQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVR 122

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M         ++YT+  +LK+CA+    + GK +H H ++       FV+ SL+NMY   
Sbjct: 123 MLLCG--VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMY--- 177

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKV--------------FDTMRR-------RNVVAW 194
                A+   L Y E+ +SK  L   V               D  RR       R+ V+W
Sbjct: 178 -----AQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSW 232

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N +++ Y ++ R+ EA+  F+ M R  + P+  + V V  A +  G  +  + V   +  
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIED 292

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G    ++L + ++ I MY++ G  D AR +F+   E++   WN MIGGY   N   EA+
Sbjct: 293 HG--LGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEAL 350

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-------- 366
            LF + ++   +  +DVTF+S L A + L  LDLG+ +HAYI K F+ L           
Sbjct: 351 ALFRK-MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLID 409

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        V   +  + + SWN MIS    +G  +  L L  +M+ +GF  D +T
Sbjct: 410 MYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDIT 469

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF----E 469
              +LSA S+                                  +GL++  RQ F    E
Sbjct: 470 FVGVLSACSH----------------------------------AGLVELGRQCFSSMVE 495

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
             D   + Q  +  MI    + GL +EA    + M    + P+     S+L AC   GN+
Sbjct: 496 DYDISPKLQ-HYGCMIDLLGRAGLFDEAEALMKNM---EMKPDGAIWGSLLGACRVHGNV 551

Query: 530 ELGKQLHGFSIRYLLD---QNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ELG+    F+ ++L +   +N      L ++Y+ +G  +  A +  K+ +K
Sbjct: 552 ELGE----FAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDK 598



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 193/420 (45%), Gaps = 40/420 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF+ I     V WN +I G+  +    EA+  + +MK+++   + +  T  +VL AC
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN--VAPNESTMVTVLSAC 274

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++ +L +G  V           +  + N+L++MYS C                     D
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKC------------------GDLD 316

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F+ +  +++++WN ++  Y     Y EA+  FR M +  + P+ ++FV++ PA +
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376

Query: 238 SLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            LG       ++  + K  LG   + +  + +S I MYA+ G  + A+++F     ++  
Sbjct: 377 YLGALDLGKWIHAYIDKKFLG---LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI G   + H   A+ELF Q+ + +    DD+TF+  LSA S    ++LG+Q  + 
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRD-EGFEPDDITFVGVLSACSHAGLVELGRQCFSS 492

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +++++   P           +  +  MI    + GL DE   L+  M+ +    D     
Sbjct: 493 MVEDYDISP----------KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP---DGAIWG 539

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK-NDSG 474
           +LL A     N ++G+    +L        G    L ++YA +G      +I  K ND G
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKG 599


>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 220/725 (30%), Positives = 365/725 (50%), Gaps = 108/725 (14%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ +L+ C+++    + + +H   I   S+ S F+   ++++Y+      DA+ V     
Sbjct: 37  FNDLLQQCSKSH---LSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRV----- 88

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
              +    + C         N++ WN+I+   V      EA+  +  M ++G+     +F
Sbjct: 89  ---FEVSPIEC-------FSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTF 138

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A + +G  K    V+G +V++G ++  +L V +  + MY ++G  D ARK+F+  
Sbjct: 139 PLVIRACALMGSRKLCRSVHGHVVEMGFQW--NLHVGNELMGMYGKIGRMDDARKVFERM 196

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             R+   WNTM+ GY  N     A E+F                                
Sbjct: 197 AVRSCVSWNTMVSGYALNYDCHGASEMFR------------------------------- 225

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                           ++ +A +E ++V+W +++S+  + G   E + L   M+ +G   
Sbjct: 226 ----------------MMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGA 269

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIF 468
            +  +  +LS + +L   D GK  H Y+++ G  ++  +++ LI +Y K G +  AR +F
Sbjct: 270 TAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILF 329

Query: 469 ----EKN------------DSGDRDQA---------------------TWNAMIAGYTQN 491
                KN            D G  D+A                     +W+A+I G+   
Sbjct: 330 LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASK 389

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G  EEA   FR+M    V  N VTIASVL  C  +  + LG+++HG  +R L+D N+ VG
Sbjct: 390 GQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVG 449

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
             LI+MY+KSG       VF KI  K+ +++ TM+ GYG HG+ E A+  F  M   G E
Sbjct: 450 NGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFE 509

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +TFVAVLSACS+AGLV EG ++FD M +E++++P  EHY C+ D+LGR G + EA +
Sbjct: 510 PDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASK 569

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            VK +  E N   +WG+LL SCR+H ++E+AE  A ++  +++   + G ++LLSNIYA 
Sbjct: 570 VVKSMPVEPNAC-VWGALLNSCRMHKNTEVAEETASQIFNLNSE--IAGSYMLLSNIYAA 626

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G WE+  KVR   + +GL+K  G SWI V   V  F++ + +H +  ++Y +L+ L ++
Sbjct: 627 SGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQ 686

Query: 792 MRNAG 796
           M   G
Sbjct: 687 MEVEG 691



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 217/511 (42%), Gaps = 120/511 (23%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           ++WN+I+   V +    EA+ +Y +M+K     S D +T+  V++ACA   + ++ ++VH
Sbjct: 101 LLWNSILRANVAHGYCEEALEIYCRMRKLG--VSADGFTFPLVIRACALMGSRKLCRSVH 158

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
            H +      +  V N L+ MY                      + D   KVF+ M  R+
Sbjct: 159 GHVVEMGFQWNLHVGNELMGMYG------------------KIGRMDDARKVFERMAVRS 200

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD--------- 241
            V+WNT+VS Y        A   FRMM   G+ P+ +++ ++  + +  G          
Sbjct: 201 CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFG 260

Query: 242 --------------------------YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                                     +    V++G +VK G E  N LFV +S I +Y +
Sbjct: 261 RMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFE--NYLFVKNSLICLYGK 318

Query: 276 LGCFDFARKIFDNCLERNTEVWNTM----------------------------------- 300
            G  + AR +F     +N   WN +                                   
Sbjct: 319 HGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVS 378

Query: 301 ----IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
               IGG+       EA+ELF + ++L ++  + VT  S LS  ++L  L LG+++H ++
Sbjct: 379 WSAVIGGFASKGQGEEALELF-RRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +++ +   ++V N +I                     +D++SWNTM++ +  +GL +  +
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
               +M K GF  D VT  A+LSA S+      G++    +++       ME Y  ++D+
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
             ++GL++ A ++  K+   + +   W A++
Sbjct: 558 LGRAGLLQEASKVV-KSMPVEPNACVWGALL 587



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 26/280 (9%)

Query: 65  ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           + RP  V W+ +I GF       EA+ L+ +M+ +      ++ T +SVL  CAE   L 
Sbjct: 371 MVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK--VKANSVTIASVLSVCAELAALH 428

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           +G+ +H H +R   + +  V N L+NMY+   S  +  +                  VF+
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL------------------VFE 470

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            +  +++++WNT+V+ Y        A+R F  M++ G  P  ++FV V  A S  G    
Sbjct: 471 KIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAE 530

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSA--IFMYAELGCFDFARKIFDNC-LERNTEVWNTMI 301
              ++  ++K   E+  +  +   A  + +    G    A K+  +  +E N  VW  ++
Sbjct: 531 GRELFDKMIK---EFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALL 587

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
                + +   A E   Q+  L+  +      LS + A S
Sbjct: 588 NSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAAS 627


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 210/640 (32%), Positives = 324/640 (50%), Gaps = 65/640 (10%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FD M  R  V W  ++  Y +  ++ EA   F  M R G  P  ++FV +    +   
Sbjct: 99  KLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHE 158

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  V   ++KLG  Y + L V                                NT+
Sbjct: 159 MGNQITQVQTQIIKLG--YDSRLIVG-------------------------------NTL 185

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +  Y ++N    A +LF ++ E+D       TF + L A   L ++ LGQQ+H+++IK  
Sbjct: 186 VDSYCKSNRLDLACQLFKEMPEIDSF-----TFAAVLCANIGLDDIVLGQQIHSFVIKTN 240

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V NA++                    E+D VS+N +IS +  +G       L  
Sbjct: 241 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 300

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSG 459
           E+Q   F         +LS ASN  + ++G+Q HA  +      E +  + L+DMYAK G
Sbjct: 301 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 360

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
             + A  IF   +   R    W AMI+ Y Q G  EE    F +M + +V  +  T AS+
Sbjct: 361 KFEEAEMIF--TNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L A   + ++ LGKQLH F I+     NVF G++L+D+Y+K G I  A   F ++P++N 
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI  Y Q+G +E  L  F+ M   G++PD+++F+ VLSACS++GLV+EGL  F+ 
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNS 538

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M Q YK+ P  EHY  V DML R G+  EA + + E+  + + + +W S+L +CR+H + 
Sbjct: 539 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEI-MWSSVLNACRIHKNQ 597

Query: 700 ELAEVVAKKLLEMDT-RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
           ELA   A +L  M+  R++ P  +V +SNIYA  G WENV KV K MR+RG++K    SW
Sbjct: 598 ELARRAADQLFNMEELRDAAP--YVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSW 655

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           +++    + F++ D+ HPQ  +I + ++ L   M   G K
Sbjct: 656 VEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYK 695



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 167/658 (25%), Positives = 288/658 (43%), Gaps = 110/658 (16%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKT---------------PTIRS--RLSKICQE 52
           + P  P A      L  + SL  P  +L                  T RS  R+    + 
Sbjct: 1   MKPFRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKN 60

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    ARQLF+ +    TV  N +I G+V +    EA  L+  M + +        T++ 
Sbjct: 61  GELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTA------VTWTI 114

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++   ++    +    +     RC + P    + +L       LS  +   +G +  +V 
Sbjct: 115 LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTL-------LSGCNGHEMGNQITQV- 166

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             +  ++   +D+     ++  NT+V  Y K+ R   A + F+ M  +     + +F  V
Sbjct: 167 --QTQIIKLGYDS----RLIVGNTLVDSYCKSNRLDLACQLFKEMPEI----DSFTFAAV 216

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A   L D      ++  ++K  + +V ++FV+++ +  Y++      ARK+FD   E+
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIK--TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ 274

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD--DVTFLSALSAVSQLQELDLGQ 350
           +   +N +I GY  +     A +LF    EL    FD     F + LS  S   + ++G+
Sbjct: 275 DGVSYNVIISGYAWDGKHKYAFDLF---RELQFTAFDRKQFPFATMLSIASNTLDWEMGR 331

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+HA  I       ++V N++++                    R  V W  MISA+VQ G
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKG 391

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGM 447
             +EGL L  +M++   + D  T  +LL A++++ +  +GKQ H+++++ G     F G 
Sbjct: 392 FYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG- 450

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            S L+D+YAK G IK A Q F+  +  DR+  +WNAMI+ Y QNG  E    +F++M+  
Sbjct: 451 -SALLDVYAKCGSIKDAVQTFQ--EMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLS 507

Query: 508 NVTPNVVTIASVLPACNPMGNIELGK-QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + P+ V+   VL AC+  G +E G    +  +  Y LD       S++DM  +SG  N 
Sbjct: 508 GLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNE 567

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           A  + A++P                                  I+PD I + +VL+AC
Sbjct: 568 AEKLMAEMP----------------------------------IDPDEIMWSSVLNAC 591



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 217/492 (44%), Gaps = 61/492 (12%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF------------- 328
           AR++F+    +NT   N MI GYV++ +  EA +LF  ++E   + +             
Sbjct: 66  ARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQF 125

Query: 329 -----------------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
                            D VTF++ LS  +  +  +   Q+   IIK      +IV    
Sbjct: 126 KEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIV---- 181

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
                   NT++ ++ ++   D    L  EM +    IDS T  A+L A   L +  +G+
Sbjct: 182 -------GNTLVDSYCKSNRLDLACQLFKEMPE----IDSFTFAAVLCANIGLDDIVLGQ 230

Query: 432 QTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H+++++    +    S  L+D Y+K   +  AR++F+  +  ++D  ++N +I+GY  
Sbjct: 231 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD--EMPEQDGVSYNVIISGYAW 288

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +G  + AF  FR++            A++L   +   + E+G+Q+H  +I    D  + V
Sbjct: 289 DGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILV 348

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           G SL+DMY+K G    A  +F  +  +++V +T MI  Y Q G  E  L LF  M+   +
Sbjct: 349 GNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASV 408

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
             D  TF ++L A +    +  G Q+   + +      +      + D+  + G + +A 
Sbjct: 409 IADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAV 467

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +  +E+ +  N++  W +++ +   +G    AE   K   EM      P     L  + A
Sbjct: 468 QTFQEMPDR-NIVS-WNAMISAYAQNGE---AEATLKSFKEMVLSGLQPDSVSFLGVLSA 522

Query: 731 -------EEGNW 735
                  EEG W
Sbjct: 523 CSHSGLVEEGLW 534



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 31/149 (20%)

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           N   N+ ++ S+    +P   + +   +    ++   D +       +  + K+G ++ A
Sbjct: 7   NALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQA 66

Query: 568 ANVFAKIPEKNS-------------------------------VTYTTMILGYGQHGMSE 596
             +F K+P KN+                               VT+T +I GY Q    +
Sbjct: 67  RQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFK 126

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  LF  M+ CG EPD +TFV +LS C+
Sbjct: 127 EAFELFVQMQRCGTEPDYVTFVTLLSGCN 155


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 195/661 (29%), Positives = 351/661 (53%), Gaps = 36/661 (5%)

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           + D   +    +R  +    N ++  +        A+  +R ML  G RP   +F  V  
Sbjct: 56  RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             + LG        +G+++KLG E+  D++  +S +  YA+LG  + A ++FD    R+ 
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEH--DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDI 173

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA----VSQLQELDLGQ 350
             WNTM+ GYV N     A+  F ++ +  E+  D V  ++AL+A    VS +Q    G+
Sbjct: 174 VTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQ----GK 229

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++H Y+I++ +   + V  ++++                    R VV+WN MI  +  N 
Sbjct: 230 EIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNE 289

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMES 449
             DE      +M+ +G  ++ VT   LL+A +   +   G+  H Y++R   +    +E+
Sbjct: 290 RPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLET 349

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L++MY K G ++++ +IF K    ++   +WN MIA Y    +  EA   F ++L   +
Sbjct: 350 ALLEMYGKVGKVESSEKIFGK--IANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+  T+++V+PA   +G++   +Q+H + I     +N  +  +++ MY++SG +  +  
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F K+  K+ +++ TMI+GY  HG  + AL +F  MK  G++P+  TFV+VL+ACS +GL
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGL 527

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VDEG   F+LM QEY + P  EHY C+ D+LGR G + E  +F++ +  +     +WGSL
Sbjct: 528 VDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTS-RVWGSL 586

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L + R     ++AE  A+++ +++  N+  G +++LS++YA+ G WE+V++VR  M+E+G
Sbjct: 587 LTASRNQNDIDIAEYAAERIFQLEHDNT--GCYIVLSSMYADAGRWEDVERVRLLMKEKG 644

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATP 809
           LR+    S +++      FA+ D  H QS  I+E+   L+ ++    +   Q+  V    
Sbjct: 645 LRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQSYPVPVAT 704

Query: 810 R 810
           R
Sbjct: 705 R 705



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 244/541 (45%), Gaps = 58/541 (10%)

Query: 14  PPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIW 73
           P T+  PPP+LP            K  + +S +  +  EGR   A +   ++  P   + 
Sbjct: 27  PATSKEPPPRLPP-----------KRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLH 75

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N +I GF    LP  A+  Y  M +       D +T+  V+K CA    L  G+A H   
Sbjct: 76  NVMIRGFADAGLPAGALAAYRGMLEDGARP--DRFTFPVVVKCCARLGGLDEGRAAHGMV 133

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           I+       +  NSL+  Y+      DAE                  +VFD M  R++V 
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAE------------------RVFDGMPVRDIVT 175

Query: 194 WNTIVSWYVKTERYVEAVRQFRMML-RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           WNT+V  YV       A+  F+ M   + ++  ++  +    A            ++G +
Sbjct: 176 WNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYV 235

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           ++ G E   D+ V +S + MY + G   +AR +F     R    WN MIGGY  N  P E
Sbjct: 236 IRHGLE--QDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A + F+Q +  + +  + VT ++ L+A +Q +    G+ +H Y+++      V++  A++
Sbjct: 294 AFDCFMQ-MRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
           E                    + +VSWN MI+A++   +  E + L  E+  Q    D  
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKN 471
           T++ ++ A   L +    +Q H+Y++  G     +  + ++ MYA+SG +  +R+IF+K 
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM 472

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
            S  +D  +WN MI GY  +G  + A   F +M  + + PN  T  SVL AC+  G ++ 
Sbjct: 473 VS--KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDE 530

Query: 532 G 532
           G
Sbjct: 531 G 531



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+ G    AR +F ++   T V WN +I G+  N  P EA   + QM+      
Sbjct: 249 SLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEG--L 306

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             +  T  ++L ACA+T +   G++VH + +R    P   +  +LL MY           
Sbjct: 307 QVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYG---------- 356

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K  +V+ S+     K+F  +  + +V+WN +++ Y+  E Y EA+  F  +L   + 
Sbjct: 357 ---KVGKVESSE-----KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLY 408

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   +   V PA   LG  +    ++  ++ LG  Y  +  + ++ + MYA  G    +R
Sbjct: 409 PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG--YAENTLIMNAVLHMYARSGDVVASR 466

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +IFD  + ++   WNTMI GY  +     A+E+F + ++ + +  ++ TF+S L+A S  
Sbjct: 467 EIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE-MKYNGLQPNESTFVSVLTACSVS 525

Query: 344 QELDLGQQLHAYIIKNFVALPVI 366
             +D G      +++ +  +P I
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQI 548


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 303/534 (56%), Gaps = 36/534 (6%)

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            N   WN++I    +    VEA+  F  + +L  ++    +F   + + S L +L  G+  
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLG-LIPTRSSFPCTIKSCSALCDLVSGRMS 2037

Query: 353  HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
            H           + V +A+I+                    R+VVSW +MI+ +VQN   
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097

Query: 393  DEGLMLVYEMQKQ--------GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            D  L+L  +  ++           +DSV + ++LSA S +  + + +  H ++++ G   
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 2157

Query: 445  E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              G+ + L+D YAK G    ++++F+  +  ++D  +WN+MIA Y Q+GL  EA   F  
Sbjct: 2158 SIGVGNTLMDAYAKCGQPLVSKKVFDWME--EKDDISWNSMIAVYAQSGLSGEALEVFHG 2215

Query: 504  MLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            M+ H  V  N VT+++VL AC   G +  GK +H   I+  L+ NV VGTS+IDMY K G
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275

Query: 563  VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
             +  A   F ++ EKN  ++T M+ GYG HG ++ AL +F  M   G++P+ ITFV+VL+
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335

Query: 623  ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
            ACS+AGLV+EG   F+ M+ +Y I+P  EHY C+ D+ GR G + EAY  +K +  + + 
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDF 2395

Query: 683  LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
            + +WGSLLG+CR+H + +L E+ A+KL E+D  N   GY+VLLSN+YA+ G W +V+++R
Sbjct: 2396 V-VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNC--GYYVLLSNLYADAGRWADVERMR 2452

Query: 743  KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              M+ R L K  G S +++ G V+ F   D+EHP    IY+ LE+L +E++  G
Sbjct: 2453 MLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 2506



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 187/362 (51%), Gaps = 34/362 (9%)

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +H Y     +A  +++   +      +WN +I A   NGL ++ LML   M  QG   D 
Sbjct: 66  IHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADK 125

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIF 468
            T   ++ A +N  + D+GK  H  L+++G  F G   +++ LID Y K G  + A ++F
Sbjct: 126 FTFPFVIKACTNFLSIDLGKVVHGSLIKYG--FSGDVFVQNNLIDFYFKCGHTRFALKVF 183

Query: 469 EKN----------------DSGDRDQA-------------TWNAMIAGYTQNGLLEEAFV 499
           EK                   GD  +A             +W AMI GY +N   EEA  
Sbjct: 184 EKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALE 243

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F++M   N+ PN  T+ S++ AC  MG + LG+ +H ++I+  ++  V++GT+LIDMYS
Sbjct: 244 LFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYS 303

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G I  A  VF  +P K+  T+ +MI   G HG+ + AL+LF  M+   ++PDAITF+ 
Sbjct: 304 KCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIG 363

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VL AC +   V EG   F  M Q Y I P  EHY C+ ++  R   + EA++  KE+G  
Sbjct: 364 VLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSL 423

Query: 680 GN 681
            N
Sbjct: 424 AN 425



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 241/486 (49%), Gaps = 42/486 (8%)

Query: 136  CFS-NPSRFVYNSLLNMYSTCLSSL--DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            C S +PS  +Y  ++N Y  C   +  ++ + G+     D+S  +L    +  + + NV 
Sbjct: 1927 CLSESPS--IYVCVVNFYE-CFDGITYNSILFGVPSGREDHS--NLATWFYKYVDKSNVH 1981

Query: 193  AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
            +WN++++   +    VEA+R F  + ++G+ P+  SF     + S+L D  S  + +   
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041

Query: 253  VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
               G E   DLFV+S+ I MY++ G    AR +FD    RN   W +MI GYVQN     
Sbjct: 2042 FVFGFE--TDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADN 2099

Query: 313  AIELFVQVLELD-------EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
            A+ LF   LE +        +  D V  +S LSA S++    + + +H +++K      +
Sbjct: 2100 ALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSI 2159

Query: 366  IVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
             V N ++                    E+D +SWN+MI+ + Q+GL  E L + + M + 
Sbjct: 2160 GVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH 2219

Query: 406  -GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
             G   ++VT++A+L A ++      GK  H  +++  + +   + + +IDMY K G ++ 
Sbjct: 2220 VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 2279

Query: 464  ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
            A++ F++    +++  +W AM+AGY  +G  +EA   F +M+   V PN +T  SVL AC
Sbjct: 2280 AKKTFDR--MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337

Query: 524  NPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
            +  G +E G    +    +Y ++  +     ++D++ ++G +N A N+  ++  K     
Sbjct: 2338 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 2397

Query: 583  TTMILG 588
               +LG
Sbjct: 2398 WGSLLG 2403



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 220/514 (42%), Gaps = 90/514 (17%)

Query: 51   QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYTSCDNY 108
            +E   +LA   +  + +     WN++I          EA+  +S ++K    P  S    
Sbjct: 1961 REDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRS---- 2016

Query: 109  TYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
            ++   +K+C+   +L  G+  H   F+  F     FV ++L++MYS C    DA      
Sbjct: 2017 SFPCTIKSCSALCDLVSGRMSHQQAFVFGFET-DLFVSSALIDMYSKCGQLKDARA---- 2071

Query: 168  YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM------- 220
                          +FD +  RNVV+W ++++ YV+ E+   A+  F+  L         
Sbjct: 2072 --------------LFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDG 2117

Query: 221  -GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
              +   ++  V+V  A S +      + V+G +VK G  +   + V ++ +  YA+ G  
Sbjct: 2118 NNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG--FDGSIGVGNTLMDAYAKCGQP 2175

Query: 280  DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
              ++K+FD   E++   WN+MI  Y Q+    EA+E+F  ++    + ++ VT  + L A
Sbjct: 2176 LVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLA 2235

Query: 340  VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSW 379
             +    L  G+ +H  +IK  +   V V  ++I                    E++V SW
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295

Query: 380  NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
              M++ +  +G   E L + Y+M + G   + +T  ++L+A S           HA L+ 
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS-----------HAGLVE 2344

Query: 440  HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
             G H+     +  D+  + G+                    +  M+  + + G L EA+ 
Sbjct: 2345 EGWHWFNAMKHKYDI--EPGI------------------EHYGCMVDLFGRAGCLNEAYN 2384

Query: 500  AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
              ++M    + P+ V   S+L AC    N++LG+
Sbjct: 2385 LIKRM---KMKPDFVVWGSLLGACRIHKNVDLGE 2415



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 185/414 (44%), Gaps = 41/414 (9%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS------CD 106
            G+   AR LFD I     V W ++I G+V N     A+LL+    +             D
Sbjct: 2064 GQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123

Query: 107  NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            +    SVL AC+      I + VH   ++   + S  V N+L++ Y+ C   L ++    
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK---- 2179

Query: 167  KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPS 225
                          KVFD M  ++ ++WN++++ Y ++    EA+  F  M+R +G+R +
Sbjct: 2180 --------------KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYN 2225

Query: 226  TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             ++   V  A +  G  ++   ++  ++K+  EY  ++ V +S I MY + G  + A+K 
Sbjct: 2226 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY--NVCVGTSIIDMYCKCGRVEMAKKT 2283

Query: 286  FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
            FD   E+N + W  M+ GY  +    EA+++F +++    +  + +TF+S L+A S    
Sbjct: 2284 FDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAG-VKPNYITFVSVLAACSHAGL 2342

Query: 346  LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            ++ G      +   +           IE  +  +  M+  F + G  +E   L+  M+ +
Sbjct: 2343 VEEGWHWFNAMKHKY----------DIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMK 2392

Query: 406  GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
                D V   +LL A    +N D+G+     L        G    L ++YA +G
Sbjct: 2393 P---DFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAG 2443



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 150/333 (45%), Gaps = 48/333 (14%)

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           N +N    +Q HA ++R G+  + +    LI +Y+  G I  A  +F +    +    TW
Sbjct: 36  NCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ--NPCTFTW 93

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N +I   T NGL E+A + ++ M+   +  +  T   V+ AC    +I+LGK +HG  I+
Sbjct: 94  NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAK---------------------------- 573
           Y    +VFV  +LID Y K G   +A  VF K                            
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213

Query: 574 ---IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
              IP KN V++T MI GY ++   E AL LF+ M+   I P+  T V+++ AC+  G++
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273

Query: 631 DEGLQIFDLMQQEYKIQPSTE--HYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
             G  I D     Y I+   E   Y   A  DM  + G + +A E  + +  +   L  W
Sbjct: 274 TLGRGIHD-----YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS--LPTW 326

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
            S++ S  +HG   L +       EM+  N  P
Sbjct: 327 NSMITSLGVHG---LGQEALNLFSEMERVNVKP 356



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 176/424 (41%), Gaps = 82/424 (19%)

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           K+ P T   N      L      +N +  + +H   IR   +  + +   L+++YST   
Sbjct: 15  KNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYST--- 71

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                          + +      +F  ++      WN I+          +A+  ++ M
Sbjct: 72  ---------------HGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNM 116

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +  GI     +F  V  A ++        VV+G L+K G  +  D+FV ++ I  Y + G
Sbjct: 117 VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG--FSGDVFVQNNLIDFYFKCG 174

Query: 278 -----------------------------CFDF--ARKIFDNCLERNTEVWNTMIGGYVQ 306
                                        C D   AR+IFD    +N   W  MI GY++
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           N  P EA+ELF + ++ + I  ++ T +S + A +++  L LG+ +H Y IKN + + V 
Sbjct: 235 NQQPEEALELF-KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVY 293

Query: 367 VLNAVIE--------RDVV------------SWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           +  A+I+        +D +            +WN+MI++   +GL  E L L  EM++  
Sbjct: 294 LGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVN 353

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GI-----HFEGMESYLIDMYAKSGL 460
              D++T   +L A  +++N   G      + +H GI     H+E M     ++YA+S  
Sbjct: 354 VKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECM----TELYARSNN 409

Query: 461 IKTA 464
           +  A
Sbjct: 410 LDEA 413



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 148/326 (45%), Gaps = 18/326 (5%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A  LF  I  P T  WN II     N L  +A++LY  M       + D +T+  
Sbjct: 73  GRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG--IAADKFTFPF 130

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC    ++ +GK VH   I+   +   FV N+L++ Y  C  +  A  V  K    +
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190

Query: 173 YSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
              +  V              ++FD +  +NVV+W  +++ Y++ ++  EA+  F+ M  
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             I P+  + V++  A + +G       ++   +K   E    +++ ++ I MY++ G  
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEI--GVYLGTALIDMYSKCGSI 308

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             A ++F+    ++   WN+MI     +    EA+ LF + +E   +  D +TF+  L A
Sbjct: 309 KDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE-MERVNVKPDAITFIGVLCA 367

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPV 365
              ++ +  G      + +++   P+
Sbjct: 368 CVHIKNVKEGCAYFTRMTQHYGIAPI 393


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 234/759 (30%), Positives = 375/759 (49%), Gaps = 84/759 (11%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           QL  S  R   V     IIG  C   L   A++ + +M ++  +   DN+   +V KAC 
Sbjct: 122 QLLFSKLRARNVFSWAAIIGVRCRIGLVEGALMGFVEMLENGLFP--DNFVVPNVCKACG 179

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             +  R G+ VH +  +   +   FV +SL +MY  C    DA                 
Sbjct: 180 ALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDAR---------------- 223

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD +  R VVAWN ++  YV+     EA+R    M   GI P+ ++      A ++
Sbjct: 224 --KVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASAN 281

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           +G  +     + + +  G E   D  + +S +  Y ++G  ++A  IFD  +E++   WN
Sbjct: 282 MGGIEEGKQSHAIAIVNGLEL--DNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWN 339

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I GYVQ     +AI +  Q++    + FD VT  S +SA ++   L LG+++  Y I+
Sbjct: 340 LLISGYVQQGLVEDAIHM-CQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIR 398

Query: 359 N-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
           + FV+  V+                   V N+ +E+D++ WNT+++A+ + GL  E L L
Sbjct: 399 HGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRL 458

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
            YEMQ +G   + +T  +++   S LRN  V +    +L    +   G+   LI      
Sbjct: 459 FYEMQLEGVPPNVITWNSVI--LSLLRNGQVNEAKDMFL---QMQSSGISPNLI------ 507

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
                                +W  M+ G  QNG  EEA V  R+M E  +  NV +I  
Sbjct: 508 ---------------------SWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITV 546

Query: 519 VLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            L AC  + ++  G+ +HG+ IR      +V + TSL+DMY+K G I+ A  VF      
Sbjct: 547 ALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYS 606

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
               Y  MI  Y  +G  + A +L+RS+ +  GIEPD IT   VLSAC +AG +++ + I
Sbjct: 607 ELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHI 666

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  + +   I  SLL SC   
Sbjct: 667 FTDMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQ-SLLASCNKQ 725

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             SEL E +++ LLE +  NS  G +V +SN+YA EG+W+ V K+R+ M+ +GL+K+ GC
Sbjct: 726 HKSELVEYLSRHLLESEPENS--GNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGC 783

Query: 757 SWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           SWI + G    V+ F + D+ H ++++I  +L  L  EM
Sbjct: 784 SWIQIKGEEQGVHVFVANDKTHFRNNEIRRILALLTYEM 822



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 259/524 (49%), Gaps = 27/524 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A+ +F     RN   W  +
Sbjct: 80  DLSTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAI 139

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE + +  D+    +   A   LQ    G+ +H Y+ K  
Sbjct: 140 IGVRCRIGLVEGALMGFVEMLE-NGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 198

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + +R VV+WN ++  +VQNG++ E + L+ 
Sbjct: 199 LHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLS 258

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
            M+ +G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + +++ Y K G
Sbjct: 259 AMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVG 318

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF++    ++D  TWN +I+GY Q GL+E+A    + M   N+  + VT++S+
Sbjct: 319 LIEYAEMIFDRMI--EKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSL 376

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+    ++ + ++ ++MY+K G I  A  VF    EK+ 
Sbjct: 377 MSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDL 436

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G+S  AL LF  M+  G+ P+ IT+ +V+ +    G V+E   +F L
Sbjct: 437 ILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMF-L 495

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG--SLLGSCRLHG 697
             Q   I P+   +  + + L + G   EA  +++++ E G  L ++     L +C    
Sbjct: 496 QMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLA 555

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
                  +   ++     +S       L ++YA+ G+    ++V
Sbjct: 556 SLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERV 599



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 185/376 (49%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  GQQ+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 79  RDLSTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAA 138

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM + G   D+  V  +  A   L+    G+  H Y+ + G
Sbjct: 139 IIGVRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 198

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K GL+  AR++F+  +  DR    WNA++ GY QNG+ +EA   
Sbjct: 199 LHDCVFVASSLADMYGKCGLLDDARKVFD--EIPDRTVVAWNALMVGYVQNGMNQEAIRL 256

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M    + P  VT+++ L A   MG IE GKQ H  +I   L+ +  +GTS+++ Y K
Sbjct: 257 LSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 316

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F ++ EK+ VT+  +I GY Q G+ E A+ + + M+   +  D +T  ++
Sbjct: 317 VGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSL 376

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G ++     Q Y I+        +A    +M  + G +V+A +     
Sbjct: 377 MSAAARTHNLKLGKEV-----QCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNST 431

Query: 677 GEEGNVLEIWGSLLGS 692
            E+  +L  W +LL +
Sbjct: 432 VEKDLIL--WNTLLAA 445



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 142/262 (54%), Gaps = 5/262 (1%)

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           +S+   +S+  + G   E L LV EM  +   I       +L      R+   G+Q HA 
Sbjct: 31  ISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHAR 90

Query: 437 LLRHGIHF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           +L++G  +   E +E+ L+  YAK   ++ A+ +F K  +  R+  +W A+I    + GL
Sbjct: 91  ILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRA--RNVFSWAAIIGVRCRIGL 148

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           +E A + F +MLE+ + P+   + +V  AC  +     G+ +HG+  +  L   VFV +S
Sbjct: 149 VEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASS 208

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L DMY K G+++ A  VF +IP++  V +  +++GY Q+GM++ A+ L  +M+  GIEP 
Sbjct: 209 LADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPT 268

Query: 614 AITFVAVLSACSYAGLVDEGLQ 635
            +T    LSA +  G ++EG Q
Sbjct: 269 RVTVSTCLSASANMGGIEEGKQ 290



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 198/454 (43%), Gaps = 84/454 (18%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M++ +   
Sbjct: 309 SILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNF 368

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T SS++ A A T NL++GK V C+ IR        + ++ + MY+ C S +DA+ 
Sbjct: 369 DC--VTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAK- 425

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVF++   ++++ WNT+++ Y +     EA+R F  M   G+ 
Sbjct: 426 -----------------KVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVP 468

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++ +V  +L   G    A                D+F+                  
Sbjct: 469 PNVITWNSVILSLLRNGQVNEA---------------KDMFL------------------ 495

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++  + +  N   W TM+ G VQN    EAI ++++ ++   +  +  +   ALSA + L
Sbjct: 496 QMQSSGISPNLISWTTMMNGLVQNGCSEEAI-VYLRKMQESGLRLNVFSITVALSACANL 554

Query: 344 QELDLGQQLHAYIIKNF---------------------VALPVIVLNAVIERDVVSWNTM 382
             L  G+ +H YII+N                      ++    V  + +  ++  +N M
Sbjct: 555 ASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAM 614

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAY---LL 438
           ISA+   G   E   L   + +  G   D++T+T +LSA  +    D+ +  H +   + 
Sbjct: 615 ISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHA--GDINQAIHIFTDMVS 672

Query: 439 RHGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           +H +    +E Y  ++D+ A +G  + A ++ E+
Sbjct: 673 KHAMK-PCLEHYGLMVDLLASAGETEKALRLIEE 705


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/546 (35%), Positives = 309/546 (56%), Gaps = 36/546 (6%)

Query: 279 FDFA-----RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
           FDF+     R +F    + N  +WNTMI G V N+   +AIE F  ++  +  + ++ TF
Sbjct: 57  FDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE-FYGLMRSEGFLPNNFTF 115

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKN------FVALPVIVLNA--------------VIE 373
              L A ++L +L LG ++H  ++K       FV   ++ L A              + +
Sbjct: 116 PFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPD 175

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           ++VVSW  +IS ++  G   E + +   + +     DS T+  +LSA + L + + G+  
Sbjct: 176 KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWI 235

Query: 434 HAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           H  ++  G+    F G  + L+DMYAK G ++ AR +F+     ++D  +W AMI GY  
Sbjct: 236 HKCIMEMGMVRNVFVG--TSLVDMYAKCGNMEKARSVFDGMP--EKDIVSWGAMIQGYAL 291

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NGL +EA   F QM   NV P+  T+  VL AC  +G +ELG+ + G   R     N  +
Sbjct: 292 NGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVL 351

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           GT+LID+Y+K G ++ A  VF  + EK+ V +  +I G   +G  + +  LF  ++  GI
Sbjct: 352 GTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGI 411

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           +PD  TF+ +L  C++AGLVDEG + F+ M + + + PS EHY C+ D+LGR G + EA+
Sbjct: 412 KPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAH 471

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           + ++ +  E N + +WG+LLG+CR+H  ++LAE+  K+L+E++  NS  G +VLLSNIY+
Sbjct: 472 QLIRNMPMEANAI-VWGALLGACRIHRDTQLAELALKQLIELEPWNS--GNYVLLSNIYS 528

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
               W+   KVR  M E+ ++K  GCSWI+V G V+ F   D+ HP S KIY  L+ L  
Sbjct: 529 ANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTK 588

Query: 791 EMRNAG 796
           +M+ AG
Sbjct: 589 KMKVAG 594



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 228/471 (48%), Gaps = 46/471 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            R LF  I +P   +WNT+I G V N+   +AI  Y  M+        +N+T+  VLKAC
Sbjct: 65  TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLP--NNFTFPFVLKAC 122

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +L++G  +H   ++   +   FV  SL+ +Y+ C    DA                
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAH--------------- 167

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD +  +NVV+W  I+S Y+   ++ EA+  FR +L M + P + + V V  A +
Sbjct: 168 ---KVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LGD  S + ++  ++++G   V ++FV +S + MYA+ G  + AR +FD   E++   W
Sbjct: 225 QLGDLNSGEWIHKCIMEMG--MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             MI GY  N  P EAI+LF+Q ++ + +  D  T +  LSA ++L  L+LG+ +   + 
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQ-MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVD 341

Query: 358 KN-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           +N F+  PV+                   V   + E+D V WN +IS    NG       
Sbjct: 342 RNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFG 401

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMY 455
           L  +++K G   D  T   LL   ++    D G++    + R       +E Y  ++D+ 
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLL 461

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            ++GL+  A Q+  +N   + +   W A++     +   + A +A +Q++E
Sbjct: 462 GRAGLLDEAHQLI-RNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIE 511



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 237/464 (51%), Gaps = 42/464 (9%)

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           N LLNM   C  S D       + + +Y+++     +F  +++ N+  WNT++   V  +
Sbjct: 46  NYLLNMILRC--SFD-------FSDTNYTRF-----LFHQIKQPNIFLWNTMIRGLVSND 91

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            + +A+  + +M   G  P+  +F  V  A + L D +    ++ L+VK G  +  D+FV
Sbjct: 92  CFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG--FDCDVFV 149

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            +S + +YA+ G  + A K+FD+  ++N   W  +I GY+      EAI++F ++LE++ 
Sbjct: 150 KTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMN- 208

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYI-----IKN-FVALPVI------------- 366
           +  D  T +  LSA +QL +L+ G+ +H  I     ++N FV   ++             
Sbjct: 209 LAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKAR 268

Query: 367 -VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V + + E+D+VSW  MI  +  NGL  E + L  +MQ++    D  TV  +LSA + L 
Sbjct: 269 SVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLG 328

Query: 426 NQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
             ++G+     + R+   +   + + LID+YAK G +  A ++F+     ++D+  WNA+
Sbjct: 329 ALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK--EKDRVVWNAI 386

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL- 543
           I+G   NG ++ +F  F Q+ +  + P+  T   +L  C   G ++ G++      R+  
Sbjct: 387 ISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFS 446

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
           L  ++     ++D+  ++G+++ A  +   +P E N++ +  ++
Sbjct: 447 LTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 52/266 (19%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR +FD +     V W  +I G+  N LP EAI L+ QM++ +    C  YT   
Sbjct: 262 GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC--YTVVG 319

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN-----SLLNMYSTCLSSLDAEMVGLK 167
           VL ACA    L +G+     ++    + + F+YN     +L+++Y+ C S   A      
Sbjct: 320 VLSACARLGALELGE-----WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAW----- 369

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                        +VF  M+ ++ V WN I+S          +   F  + ++GI+P   
Sbjct: 370 -------------EVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGN 416

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC--------- 278
           +F+ +    +  G           LV  G  Y N ++   S        GC         
Sbjct: 417 TFIGLLCGCTHAG-----------LVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465

Query: 279 -FDFARKIFDNC-LERNTEVWNTMIG 302
             D A ++  N  +E N  VW  ++G
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLG 491


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 217/691 (31%), Positives = 350/691 (50%), Gaps = 81/691 (11%)

Query: 128 AVHCHFIRCFSNPS-RFVYNSLLNMYST------CLSSLDAEMVGLKYVEVD-----YSK 175
           AVH   +R   +PS  ++ N+LL  Y++           DA M G   V  +      ++
Sbjct: 31  AVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDA-MPGRNLVTGNSLLSALAR 89

Query: 176 YDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR--MGIRPSTISFV 230
             LV    ++F ++ +R+ V++N +++ + +   +  A   +  +LR   G+RPS I+  
Sbjct: 90  AGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMS 149

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            V    S+LGD      V+  +++LG  +    F  S  + MYA++G    AR++FD   
Sbjct: 150 GVVMVASALGDRALGRQVHCQILRLG--FGAYAFTGSPLVDMYAKVGPIGDARRVFDEME 207

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            +N  + NTMI G ++     EA  LF                                 
Sbjct: 208 GKNVVMCNTMITGLLRCKMVAEARALF--------------------------------- 234

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                              A+ ERD ++W TM++   QNGL+ E L +   M+ +G  ID
Sbjct: 235 ------------------EAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGID 276

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQI 467
             T  ++L+A   L   + GKQ HAY+ R       F G  S L+DMY+K   ++ A  +
Sbjct: 277 QYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG--SALVDMYSKCRSVRLAEAV 334

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F +     ++  +W AMI GY QNG  EEA   F +M    + P+  T+ SV+ +C  + 
Sbjct: 335 FRRMMW--KNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLA 392

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           ++E G Q H  ++   L   V V  +L+ +Y K G I  A  +F ++   + V++T +++
Sbjct: 393 SLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVM 452

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GY Q G ++  + LF  M   G++PD +TF+ VLSACS +GLVD+G   F  MQQ++ I 
Sbjct: 453 GYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIV 512

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P  +HY C+ D+  R G + +A EF+K++    +    W +LL +CRL G  E+ +  A+
Sbjct: 513 PLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFG-WATLLSACRLRGDMEIGKWAAE 571

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            LL++D +N  P  +VLL +++A +G W +V K+R+ MR+R ++KE GCSWI     V+ 
Sbjct: 572 NLLKLDPQN--PASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHI 629

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           F++ DQ HP S  IYE L+ L  +M   G K
Sbjct: 630 FSADDQSHPFSRTIYEKLQWLNSKMVEEGYK 660



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 227/567 (40%), Gaps = 82/567 (14%)

Query: 10  LPPPPPT--------ATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQL 61
           LP P PT        A      LP    +   +P     T  S LS + + G      +L
Sbjct: 40  LPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERL 99

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F S+ +   V +N ++ GF        A   Y  + +          T S V+   +   
Sbjct: 100 FTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALG 159

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA-----EMVGLKYVEVDYSKY 176
           +  +G+ VHC  +R       F  + L++MY+      DA     EM G   V  +    
Sbjct: 160 DRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMIT 219

Query: 177 DLV-CK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            L+ CK       +F+ +  R+ + W T+V+   +     EA+  FR M   G+     +
Sbjct: 220 GLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYT 279

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F ++  A  +L   +    ++  + +  + Y +++FV S+ + MY++      A  +F  
Sbjct: 280 FGSILTACGALAALEEGKQIHAYITR--TCYEDNVFVGSALVDMYSKCRSVRLAEAVFRR 337

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + +N   W  MI GY QN    EA+ +F + ++ D I  DD T  S +S+ + L  L+ 
Sbjct: 338 MMWKNIISWTAMIVGYGQNGCGEEAVRVFSE-MQRDGIKPDDFTLGSVISSCANLASLEE 396

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G Q H   + + +   V V NA++                      D VSW  ++  + Q
Sbjct: 397 GAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQ 456

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGI-HFEG 446
            G   E + L  +M  +G   D VT   +LSA S     D G+   H+    H I   + 
Sbjct: 457 FGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDD 516

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + +ID+Y++SG +K A                               E F+  +QM  
Sbjct: 517 HYTCMIDLYSRSGWLKQA-------------------------------EEFI--KQMPR 543

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGK 533
               P+    A++L AC   G++E+GK
Sbjct: 544 ---CPDAFGWATLLSACRLRGDMEIGK 567



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 175/403 (43%), Gaps = 38/403 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LF++I    ++ W T++ G   N L  EA+ ++ +M+        D YT+ S+L AC
Sbjct: 230 ARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEG--VGIDQYTFGSILTAC 287

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H +  R     + FV ++L++MYS C S   AE               
Sbjct: 288 GALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAE--------------- 332

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +N+++W  ++  Y +     EAVR F  M R GI+P   +  +V  + +
Sbjct: 333 ---AVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389

Query: 238 SLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +L   +     + L +  G   YV    V+++ + +Y + G  + A ++FD     +   
Sbjct: 390 NLASLEEGAQFHCLALVSGLRPYVT---VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS 446

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  ++ GY Q     E I+LF ++L    +  D VTF+  LSA S+   +D G+     +
Sbjct: 447 WTALVMGYAQFGKAKETIDLFEKMLS-KGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSM 505

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            ++   +P+             +  MI  + ++G   +    + +M +     D+     
Sbjct: 506 QQDHDIVPLD----------DHYTCMIDLYSRSGWLKQAEEFIKQMPR---CPDAFGWAT 552

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LLSA     + ++GK     LL+           L  M+A  G
Sbjct: 553 LLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKG 595


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 223/734 (30%), Positives = 369/734 (50%), Gaps = 60/734 (8%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD-- 106
           + + GR   A ++F      + V WN  + G V N     A+ ++  M     + SC+  
Sbjct: 114 LAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV----WGSCEPN 169

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           ++TYS  L ACA    L +G+AVH   +R       FV  SL+NMY+ C   + A M   
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC-GDMGAAM--- 225

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         + F  M  RNVV+W T ++ +V+ +  V A+   R M+R G+  + 
Sbjct: 226 --------------REFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  ++  A + +   + A  ++G+++K  +E   D  V  + I  Y   G  + + K+F
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLK--TEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 287 DNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           +      N  +W+  I G V N+  + +++L  ++     +  +D  + S  S+V+ ++ 
Sbjct: 330 EEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFH-QGLRPNDKCYASVFSSVNSIE- 386

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
              G QLH+  IK      ++V +A+                     ERD VSW  M++ 
Sbjct: 387 --FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  +G   E  +    M   GF  D V++TA+LSA +       GK+ H + LR      
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETT 504

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +    I MY+K   ++TAR+IF+      +DQ  W++MI+GY  NG  EEA   F+ M+
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPR--KDQVMWSSMISGYATNGCGEEAISLFQLMV 562

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             ++  +    +S+L  C  +      K LHG++I+  +  +  V +SL+ +YS+SG ++
Sbjct: 563 AASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMD 622

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF +I   + V +TT+I GY QHG S+ AL++F  M   G+ PD +  V+VLSACS
Sbjct: 623 DSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 682

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
             GLV++G   F+ M+  Y ++P  +HYCC+ D+LGR G++ EA  FV  +  + +++ +
Sbjct: 683 RNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM-V 741

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL +CR+H  + L   V  K+ E    N   G    LSNI A  G+WE V ++RK M
Sbjct: 742 WSTLLAACRVHDDTVLGRFVENKIRE---GNYDSGSFATLSNILANSGDWEEVARIRKTM 798

Query: 746 RERGLRKEVGCSWI 759
             +G+ KE G S +
Sbjct: 799 --KGVNKEPGWSMV 810



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 190/386 (49%), Gaps = 27/386 (6%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
            + +V +  + + A+ G    A ++F +    +   WN  + G V+N     A+E+F  +
Sbjct: 102 GNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDM 161

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           +       +  T+  ALSA +  +EL +G+ +H  +++      V V  +++        
Sbjct: 162 V-WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGD 220

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        R+VVSW T I+ FVQ+      ++L+ EM + G  I+  T T++L A
Sbjct: 221 MGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            + +       Q H  +L+  ++ +  ++  LI  Y   G I+ + ++FE+  +   +++
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVS-NRS 339

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            W+A I+G + + LL    +  R+M    + PN    ASV  + N   +IE G QLH  +
Sbjct: 340 IWSAFISGVSNHSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSA 395

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+      + VG++L  MYS+   +  +  VF ++ E++ V++T M+ G+  HG S  A 
Sbjct: 396 IKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAF 455

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACS 625
             FR+M   G +PD ++  A+LSAC+
Sbjct: 456 LTFRNMILDGFKPDHVSLTAILSACN 481



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%)

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L  N +V T ++D+ +KSG +  A  VFA     ++V +   + G  ++G    A+ +FR
Sbjct: 100 LSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFR 159

Query: 604 SMKGCGIEPDAITFVAVLSACS 625
            M     EP++ T+   LSAC+
Sbjct: 160 DMVWGSCEPNSFTYSGALSACA 181


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 219/768 (28%), Positives = 378/768 (49%), Gaps = 93/768 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++F+++    +V W  +I G   N    EA+LL+ Q+                VL AC
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI----------------VLSAC 261

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +      GK +H   ++   +   +V N+L+ +YS   +   AE               
Sbjct: 262 TKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAE--------------- 306

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++F  M +R+ V++N+++S   +      A+  F+ M     +P  ++  ++  A +
Sbjct: 307 ---QIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACA 363

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+G   +    +   +K G    +D+ V  S + +Y +      A + F  C        
Sbjct: 364 SVGALPNGKQFHSYAIKAG--MTSDIVVEGSLLDLYVKCSDIKTAHEFF-LC-------- 412

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
                 Y Q ++  ++ ++F Q ++++ IV +  T+ S L   + L   DLG+Q+H  ++
Sbjct: 413 ------YGQLDNLNKSFQIFTQ-MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVL 465

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V V + +I                    E DVVSW  MI+ + Q+    E L 
Sbjct: 466 KTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALN 525

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           L  EMQ QG   D++   + +SA + ++  D G+Q HA     G   +  + + L+ +YA
Sbjct: 526 LFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYA 585

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G ++ A   F++  +  +D  +WN++++G+ Q+G  EEA   F QM +  +  N  T 
Sbjct: 586 RCGKVREAYAAFDQIYA--KDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTF 643

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            S + A   + N+ +GKQ+HG   +   D    V  +LI +Y+K G I+           
Sbjct: 644 GSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID----------- 692

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
              +++ +MI GY QHG    AL LF  MK   + P+ +TFV VLSACS+ GLVDEG+  
Sbjct: 693 --DISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISY 750

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M + + + P  EHY CV D+LGR G +  A  FV+E+  + + + +W +LL +C +H
Sbjct: 751 FRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAM-VWRTLLSACNVH 809

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + ++ E  A  LLE++ ++S    +VL+SN+YA  G W+  D+ R+ M++RG++KE G 
Sbjct: 810 KNIDIGEFAASHLLELEPKDSAT--YVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGR 867

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSN 804
           SW++V   V+ F + DQ HP++  IYE L    ++ R A N  +   N
Sbjct: 868 SWVEVDNSVHAFFAGDQNHPRADMIYEYLR--GLDFRAAENGYVPRCN 913



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 166/569 (29%), Positives = 261/569 (45%), Gaps = 75/569 (13%)

Query: 165 GLKYVEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           GLK ++   +  DL C   VFD M  R++  WN I + ++           FR ML   +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVK-LGSEYVNDLFVASSAIFMYAELGCFDF 281
                 F  V    S  G+  S   V  +  K + S + +  F+ +  I +Y + G    
Sbjct: 160 EFDERIFAVVLRGCS--GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSS 217

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A+K+F+N   R++  W  MI G  QN +  EA+ LF Q++               LSA +
Sbjct: 218 AKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV---------------LSACT 262

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
           +++  + G+QLH  ++K   +    V NA++                    +RD VS+N+
Sbjct: 263 KVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNS 322

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +IS   Q G  +  L L  +M       D VTV +LLSA +++     GKQ H+Y ++ G
Sbjct: 323 LISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAG 382

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  +  +E  L+D+Y K   IKTA + F                   Y Q   L ++F  
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFF-----------------LCYGQLDNLNKSFQI 425

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F QM    + PN  T  S+L  C  +G  +LG+Q+H   ++     NV+V + LIDMY+K
Sbjct: 426 FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK 485

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +++A  +F ++ E + V++T MI GY QH     AL+LF+ M+  GI+ D I F + 
Sbjct: 486 HGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASA 545

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC-------CVADMLGRVGKVVEAYEFV 673
           +SAC+    +D+G QI          Q     Y         +  +  R GKV EAY   
Sbjct: 546 ISACAGIQALDQGRQI--------HAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAF 597

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            ++  + NV   W SL+      G+ E A
Sbjct: 598 DQIYAKDNV--SWNSLVSGFAQSGYFEEA 624



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 191/415 (46%), Gaps = 61/415 (14%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G+   A ++F  +     V W  +I G+  ++   EA+ L+ +M+        DN  +
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG--IKSDNIGF 542

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSR--FVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +S + ACA  + L  G+ +H     C S  S    + N+L+++Y+ C    +A       
Sbjct: 543 ASAISACAGIQALDQGRQIHAQ--SCLSGYSDDLSIGNALVSLYARCGKVREAY------ 594

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                         FD +  ++ V+WN++VS + ++  + EA+  F  M + G+  ++ +
Sbjct: 595 ------------AAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 642

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +   A +++ + +    ++G++ K G  Y ++  V+++ I +YA+ G  D        
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKTG--YDSETEVSNALITLYAKCGTID-------- 692

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
                   WN+MI GY Q+    EA++LF  + +LD ++ + VTF+  LSA S +  +D 
Sbjct: 693 -----DISWNSMITGYSQHGCGFEALKLFEDMKQLD-VLPNHVTFVGVLSACSHVGLVDE 746

Query: 349 GQQLHAYIIK--NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           G      + +  N V  P              +  ++    ++GL       V EM  Q 
Sbjct: 747 GISYFRSMSEAHNLVPKP------------EHYACVVDLLGRSGLLSRAKRFVEEMPIQP 794

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
              D++    LLSA +  +N D+G+   ++LL   +  +   +Y++  +MYA SG
Sbjct: 795 ---DAMVWRTLLSACNVHKNIDIGEFAASHLLE--LEPKDSATYVLVSNMYAVSG 844



 Score = 40.4 bits (93), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 19/122 (15%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M +H V  N  T   +L  C                   L  ++ + G  LID Y   G 
Sbjct: 72  MEQHGVRANSQTFLWLLEGC-------------------LNSRSFYDGLKLIDFYLAFGD 112

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +N A NVF ++P ++   +  +   +    +  R   LFR M    +E D   F  VL  
Sbjct: 113 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 172

Query: 624 CS 625
           CS
Sbjct: 173 CS 174


>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 730

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 209/635 (32%), Positives = 334/635 (52%), Gaps = 73/635 (11%)

Query: 173 YSKYDLVCKVFDTMRRRNVV---AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           Y+ +DL+          N++    WN ++S YV+   + EA+  ++ M   GIRP   ++
Sbjct: 138 YTNFDLLADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTY 197

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A       +  D+ +G            L  + +A                  +C
Sbjct: 198 PSVLKACG-----EKLDIAFG----------KKLHASINA------------------SC 224

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L  N  V N+++  Y +      A  LF  +LE D++ ++  T +S  ++    +E    
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWN--TMISGYASKGMWKE---- 278

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                   + F  + V      IE ++++WNT+    VQ+G  +E L L+  M+  G  +
Sbjct: 279 ------AFELFGKMRV----EGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDM 328

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LIDMYAKSGLIKTARQ 466
           DSV     L A S++    +G++ H   +R    ++G+++    LI MY++   ++ A  
Sbjct: 329 DSVATIIGLGACSHIGAIKLGREIHGSAIRS--FYDGVDNVKNALITMYSRCKYLRHAYN 386

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+   +  ++  TWN+M++GYT     EEA   FR+ML   + PN VTIAS+LP C  +
Sbjct: 387 LFQSTRT--KNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARV 444

Query: 527 GNIELGKQLHGFSIR------YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            N++ GK+ H + +R      YLL  N     SL+DMY++SG +  A  +F  I  ++ V
Sbjct: 445 ANLQHGKEFHCYILRRAGFKDYLLLWN-----SLVDMYARSGKVLEAKRLFDSISRRDEV 499

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           TYT++I GYG  G    AL LF  MK   I+PD +T VAVLSACS++GLV EG+++F+LM
Sbjct: 500 TYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELM 559

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
              Y I P  EH+ C+ D+ GR G + +A E +  +    +   +W +LLG+CR+HG++E
Sbjct: 560 PSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSS-AMWATLLGACRIHGNAE 618

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           + E  A+KLLEM   NS  GY+VL++N+YA  G W  + KVR  MR+ G+RK  GC+W+D
Sbjct: 619 IGEWAAEKLLEMRPENS--GYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVD 676

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           VG     F   D   P  +K+Y +LE L   M++A
Sbjct: 677 VGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDA 711



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 114/222 (51%), Gaps = 7/222 (3%)

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
           NL++   GKQ H  ++  G  FE    +   L+  Y    L+  A  I E  +S      
Sbjct: 105 NLKSLSQGKQLHTLIISLG--FEQHPIIVPKLVTFYTNFDLLADAHTITE--NSNILHPL 160

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            WN +I+ Y +NGL  EA  A++QM    + P+  T  SVL AC    +I  GK+LH   
Sbjct: 161 PWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASI 220

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
               L  N+FV  SL+ MY+K+G ++ A  +F  + E++ V++ TMI GY   GM + A 
Sbjct: 221 NASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAF 280

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
            LF  M+  GIE + IT+  +   C  +G  +E L++   M+
Sbjct: 281 ELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMR 322



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G+   A++LFDSI+R   V + ++I G+       EA+ L+ +MKK   +   D+ T 
Sbjct: 479 RSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKR--HIKPDHVTM 536

Query: 111 SSVLKACAET 120
            +VL AC+ +
Sbjct: 537 VAVLSACSHS 546


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 207/627 (33%), Positives = 333/627 (53%), Gaps = 29/627 (4%)

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +++ N I+S Y+   +Y   ++ F  M+   +    ++F+ V      L        V+ 
Sbjct: 287 IISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           + +KLG + +  L V++S I MY +L     AR +F+N  ER+   WN++I G  Q++  
Sbjct: 347 MALKLGLDLM--LTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLE 404

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIK------NFVAL 363
           VEA+ LF+Q+L    +  D  T  S L A S L E L L +Q+H + IK      +FV+ 
Sbjct: 405 VEAVCLFMQLLRCG-LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463

Query: 364 PVI-------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
            +I             VL      D+V+WN M+S + Q+    + L L   M KQG   D
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSD 523

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
             T+  +L     L   + GKQ HAY ++ G   +  + S ++DMY K G +  A+  F+
Sbjct: 524 DFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 583

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                D     W  +I+G  +NG  E A   F QM    V P+  TIA++  A + +  +
Sbjct: 584 SIPVPD--DVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 641

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E G+Q+H  +++     + FVGTSL+DMY+K G I+ A  +F +I   N   +  M++G 
Sbjct: 642 EQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 701

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            QHG  + AL LF+ M+  GI+PD +TF+ VLSACS++GLV E  +    M ++Y I+P 
Sbjct: 702 AQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPE 761

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY C+AD LGR G V EA   +  +  E +   ++ +LL +CR+ G +E  + VA KL
Sbjct: 762 IEHYSCLADALGRAGLVKEAENLIDSMSMEASA-SMYRTLLAACRVQGDTETGKRVATKL 820

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE++  +S    +VLLSN+YA    W+ +   R  M+   ++K+ G SWI+V   ++ F 
Sbjct: 821 LELEPLDS--SAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFV 878

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
             D+ +PQ+  IY+ ++ +  +++  G
Sbjct: 879 VDDRSNPQTELIYKKVKDMIRDIKQEG 905



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 184/727 (25%), Positives = 331/727 (45%), Gaps = 94/727 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGF------VCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           AR++FD +     V WN+I+  +      V  N+  EA LL+  +++   YTS    T S
Sbjct: 100 ARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVK-EAFLLFRILRQDVVYTS--RMTLS 156

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK C  +  +   ++ H +  +   +   FV  +L+N+Y             LK+ +V
Sbjct: 157 PMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIY-------------LKFGKV 203

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
              +      +F+ M  R+VV WN ++  Y++     EA+         G+ P+ I+ + 
Sbjct: 204 KEGRV-----LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT-LR 257

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           +   +S  GD   A  V         E  ND    S  I           +R        
Sbjct: 258 LLSRIS--GDDSEAGQVKSF------ENGNDASAVSEII-----------SR-------- 290

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
                 N ++ GY+        ++ F+ ++E D +  D VTF+  L+   +L  L LGQQ
Sbjct: 291 ------NKILSGYLHAGQYSALLKCFMDMVESD-LECDQVTFILVLATAVRLDSLALGQQ 343

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +H   +K  + L + V N++I                    ERD++SWN++I+   Q+ L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL-RNQDVGKQTHAYLLR-HGIHFEGMES 449
           + E + L  ++ + G   D  T+T++L AAS+L     + KQ H + ++ + +    + +
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVST 463

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LID Y+++  +K A  +F +N+    D   WNAM++GYTQ+    +    F  M +   
Sbjct: 464 ALIDAYSRNRCMKEAEVLFGRNNF---DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             +  T+A+VL  C  +  I  GKQ+H ++I+   D +++V + ++DMY K G ++ A  
Sbjct: 521 RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 580

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F  IP  + V +TT+I G  ++G  ERAL +F  M+  G+ PD  T   +  A S    
Sbjct: 581 AFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTA 640

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           +++G QI        K+  +++ +    + DM  + G + +AY   K +  E   +  W 
Sbjct: 641 LEQGRQIH---ANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRI--EMMNITAWN 695

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           ++L     HG  + A  + K++  +  +     +  +LS         E    +R   R+
Sbjct: 696 AMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRD 755

Query: 748 RGLRKEV 754
            G++ E+
Sbjct: 756 YGIKPEI 762



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 250/530 (47%), Gaps = 43/530 (8%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L+    T +L +GK  H   +    NP RF+ N+L++MYS C S        L Y     
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGS--------LTYAR--- 101

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVK-TERYVEAVRQ----FRMMLRMGIRPSTIS 228
                  +VFD M  R++V+WN+I++ Y + +E  VE V++    FR++ +  +  S ++
Sbjct: 102 -------RVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMT 154

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
              +       G   +++  +G   K+G +   D FVA + + +Y + G     R +F+ 
Sbjct: 155 LSPMLKLCLHSGYVCASESFHGYACKIGLD--GDDFVAGALVNIYLKFGKVKEGRVLFEE 212

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+  +WN M+  Y++     EAI+L         +  +++T L  LS +S       
Sbjct: 213 MPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHTSGLHPNEIT-LRLLSRIS------- 263

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G    A  +K+F        +A    +++S N ++S ++  G     L    +M +    
Sbjct: 264 GDDSEAGQVKSFENGN----DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLE 319

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D VT   +L+ A  L +  +G+Q H   L+ G+     + + LI+MY K   I  AR +
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTV 379

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM- 526
           F  N+  +RD  +WN++IAG  Q+ L  EA   F Q+L   + P+  T+ SVL A + + 
Sbjct: 380 F--NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLP 437

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             + L KQ+H  +I+     + FV T+LID YS++  +  A  +F +    + V +  M+
Sbjct: 438 EGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMM 496

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            GY Q     + L LF  M   G   D  T   VL  C +   +++G Q+
Sbjct: 497 SGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQV 546



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 267/573 (46%), Gaps = 62/573 (10%)

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           CD  T+  VL       +L +G+ VHC  ++   +    V NSL+NMY            
Sbjct: 320 CDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMY------------ 367

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                     K  L   VF+ M  R++++WN++++   +++  VEAV  F  +LR G++P
Sbjct: 368 ------CKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKP 421

Query: 225 STISFVNVFPALSSLGDYKS-ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
              +  +V  A SSL +  S +  ++   +K  +  V D FV+++ I  Y+   C   A 
Sbjct: 422 DHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNN--VADSFVSTALIDAYSRNRCMKEAE 479

Query: 284 KIFDNCLERNT---EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +F     RN      WN M+ GY Q++   + +ELF  + +  E   DD T  + L   
Sbjct: 480 VLFG----RNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERS-DDFTLATVLKTC 534

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWN 380
             L  ++ G+Q+HAY IK+   L + V + +++                     D V+W 
Sbjct: 535 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 594

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           T+IS  ++NG ++  L +  +M+  G + D  T+  L  A+S L   + G+Q HA  L+ 
Sbjct: 595 TLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL 654

Query: 441 GIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                 F G  + L+DMYAK G I  A  +F++ +    +   WNAM+ G  Q+G  +EA
Sbjct: 655 NCTSDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM--MNITAWNAMLVGLAQHGEGKEA 710

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQLHGFSIRYLLDQNVFVGTSLID 556
              F+QM    + P+ VT   VL AC+  G + E  K +      Y +   +   + L D
Sbjct: 711 LQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLAD 770

Query: 557 MYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP-DA 614
              ++G++  A N+   +  E ++  Y T++      G +E    +  + K   +EP D+
Sbjct: 771 ALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRV--ATKLLELEPLDS 828

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
             +V + +  + A   DE +++   M + +K++
Sbjct: 829 SAYVLLSNMYAAASKWDE-MKLARTMMKGHKVK 860



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 213/475 (44%), Gaps = 62/475 (13%)

Query: 26  QIHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H ++  +   L      S ++  C+  +  LAR +F++++    + WN++I G   ++
Sbjct: 343 QVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSD 402

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET-RNLRIGKAVHCHFIRCFSNPSRF 143
           L  EA+ L+ Q+ +       D+YT +SVLKA +     L + K +H H I+  +    F
Sbjct: 403 LEVEAVCLFMQLLRCG--LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSF 460

Query: 144 VYNSLLNMYS--TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           V  +L++ YS   C          +K  EV + + +            ++VAWN ++S Y
Sbjct: 461 VSTALIDAYSRNRC----------MKEAEVLFGRNNF-----------DLVAWNAMMSGY 499

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            ++    + +  F +M + G R    +   V      L        V+   +K G  Y  
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSG--YDL 557

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           DL+V+S  + MY + G    A+  FD+    +   W T+I G ++N     A+ +F Q +
Sbjct: 558 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQ-M 616

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVIVLNA----- 370
            L  ++ D+ T  +   A S L  L+ G+Q+HA  +K       FV   ++ + A     
Sbjct: 617 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSI 676

Query: 371 -----VIER----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                + +R    ++ +WN M+    Q+G   E L L  +M+  G   D VT   +LSA 
Sbjct: 677 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSAC 736

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GME------SYLIDMYAKSGLIKTARQIFE 469
           S+      G  + AY     +H + G++      S L D   ++GL+K A  + +
Sbjct: 737 SH-----SGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLID 786



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 118/218 (54%), Gaps = 18/218 (8%)

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTA 464
           GF+ D+++ + L+          +GK THA +L    + E  + + LI MY+K G +  A
Sbjct: 51  GFLRDAISTSDLM----------LGKCTHARILALEENPERFLVNNLISMYSKCGSLTYA 100

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQN--GLLE---EAFVAFRQMLEHNVTPNVVTIASV 519
           R++F+K    +RD  +WN+++A Y Q+  G++E   EAF+ FR + +  V  + +T++ +
Sbjct: 101 RRVFDKMP--ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPM 158

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L  C   G +   +  HG++ +  LD + FV  +L+++Y K G +     +F ++P ++ 
Sbjct: 159 LKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDV 218

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           V +  M+  Y + G  E A+ L  +    G+ P+ IT 
Sbjct: 219 VLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL 256


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/595 (33%), Positives = 317/595 (53%), Gaps = 58/595 (9%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSL 239
           K+FD +   ++  WN I+  YV    + +A+R F  M+  G   P   +F  V  A S +
Sbjct: 138 KLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVM 197

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
                  +++G    L S + +++FV +S + MY   G    AR++F+  L+R+   WNT
Sbjct: 198 SMLNVGVLIHGR--ALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNT 255

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI G+ QN  P EA+ +F  +++   +  D  T +SAL +   L+EL+LG ++H  + KN
Sbjct: 256 MISGWFQNGRPEEALAVFNSMMD-ARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKN 314

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            +   + V NA++                    E+DV++W +MI+ ++ NG     L L 
Sbjct: 315 HLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALC 374

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             MQ  G + ++VT+ +LLSA ++L                             MYAK  
Sbjct: 375 PAMQLDGVVPNAVTLASLLSACASL---------------------------CYMYAKCN 407

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  + Q+F K  +  +    WNA+++G   N L  EA   F+ ML   V  N  T  SV
Sbjct: 408 AVSYSFQVFAK--TSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSV 465

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP--EK 577
           +PA   + +++    LH + +R      + V T LIDMYSK G ++YA  +F +IP  EK
Sbjct: 466 IPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEK 525

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + + ++ +I GYG HG  E A+ LF  M   G++P+ ITF +VL ACS+ GLVD+GL +F
Sbjct: 526 DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLF 585

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
             M + Y   P   HY CV D+LGR G++ EAY+ +K +  + N   IWG+LLG+C +H 
Sbjct: 586 KYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQN-HSIWGALLGACLIHQ 644

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           + EL EV A++L E++  ++  G ++LL+NIYA  G W++ + VR  M + GLRK
Sbjct: 645 NVELGEVAAERLFELEPEST--GNYILLANIYAAVGRWKDAENVRHIMSKIGLRK 697



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 291/616 (47%), Gaps = 70/616 (11%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR+LFD ++ P+  +WN II  +V     ++A+ ++  M  S  +   D YT+  V+KA
Sbjct: 135 LARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWP-DKYTFPLVIKA 193

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+    L +G  +H   +    + + FV NSLL MY  C                   K 
Sbjct: 194 CSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNC------------------GKV 235

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            L  +VF+ M +R+VV+WNT++S + +  R  EA+  F  M+   + P + + V+  P+ 
Sbjct: 236 GLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSC 295

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             L + +    V+ L+ K  +     + V ++ + MY+  G  D A  +F    E++   
Sbjct: 296 GYLKELELGIKVHKLVQK--NHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVIT 353

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +MI GY+ N +   A+ L    ++LD +V + VT  S LSA + L         + Y 
Sbjct: 354 WTSMINGYIMNGNAKSALAL-CPAMQLDGVVPNAVTLASLLSACASL--------CYMYA 404

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
             N V+    V     ++  V WN ++S  + N L  E + L   M  +    +  T  +
Sbjct: 405 KCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNS 464

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           ++ A + L +       H+YL+R G I    + + LIDMY+K G +  A +IF++  + +
Sbjct: 465 VIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKE 524

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D   W+ +IAGY  +G  E A + F QM+   + PN +T  SVL AC            
Sbjct: 525 KDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHAC------------ 572

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
              S R L+D  + +   +I+ Y  S + N+               YT ++   G+ G  
Sbjct: 573 ---SHRGLVDDGLTLFKYMIENYPSSPLPNH---------------YTCVVDLLGRAGRL 614

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE-YKIQP-STEHY 653
           + A  L +SM     + +   + A+L AC    L+ + +++ ++  +  ++++P ST +Y
Sbjct: 615 DEAYDLIKSMP---FQQNHSIWGALLGAC----LIHQNVELGEVAAERLFELEPESTGNY 667

Query: 654 CCVADMLGRVGKVVEA 669
             +A++   VG+  +A
Sbjct: 668 ILLANIYAAVGRWKDA 683



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 212/465 (45%), Gaps = 62/465 (13%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA  GC   ARK+FD+  + +  +WN +I  YV      +A+ +F  ++   +   D  T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYT 186

Query: 333 FLSALSAVSQLQELDLGQQLHA--------------------YIIKNFVALPVIVLNAVI 372
           F   + A S +  L++G  +H                     Y+    V L   V N ++
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           +R VVSWNTMIS + QNG  +E L +   M       DS T+ + L +   L+  ++G +
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIK 306

Query: 433 THAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
            H  + ++ +  E +E  + L+DMY++ G I  A  +F   ++ ++D  TW +MI GY  
Sbjct: 307 VHKLVQKNHLQ-EKIEVRNALVDMYSRCGGIDEASLVFA--ETKEKDVITWTSMINGYIM 363

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG  + A      M    V PN VT+AS+L AC                           
Sbjct: 364 NGNAKSALALCPAMQLDGVVPNAVTLASLLSAC--------------------------- 396

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             SL  MY+K   ++Y+  VFAK  +K +V +  ++ G   + ++  A+ LF+SM    +
Sbjct: 397 -ASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEV 455

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKV 666
           E +  TF +V+ A  YA L D   Q+ +L    Y ++        V     DM  + G +
Sbjct: 456 EANHATFNSVIPA--YAILADLK-QVMNL--HSYLVRSGFISKIAVITGLIDMYSKCGSL 510

Query: 667 VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
             A++   E+  +   + +W  L+    +HGH E A ++  +++ 
Sbjct: 511 DYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVH 555



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 165/370 (44%), Gaps = 62/370 (16%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  LARQ+F+ + + + V WNT+I G+  N  P EA+ +++ M  +      D+ T  S
Sbjct: 233 GKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDAR--VEPDSATIVS 290

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L +C   + L +G  VH    +        V N+L++MYS C    +A +V  +  E D
Sbjct: 291 ALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKD 350

Query: 173 ----------------------------------------------------YSKYDLVC 180
                                                               Y+K + V 
Sbjct: 351 VITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVS 410

Query: 181 ---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF    ++  V WN ++S  +  E   EAV  F+ ML   +  +  +F +V PA +
Sbjct: 411 YSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYA 470

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTE 295
            L D K    ++  LV+ G  +++ + V +  I MY++ G  D+A KIFD     E++  
Sbjct: 471 ILADLKQVMNLHSYLVRSG--FISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDII 528

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           VW+ +I GY  + H   A+ LF Q++    +  +++TF S L A S    +D G  L  Y
Sbjct: 529 VWSVLIAGYGMHGHGETAVLLFNQMVH-SGMQPNEITFTSVLHACSHRGLVDDGLTLFKY 587

Query: 356 IIKNFVALPV 365
           +I+N+ + P+
Sbjct: 588 MIENYPSSPL 597


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 186/556 (33%), Positives = 308/556 (55%), Gaps = 28/556 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +  + MYA+L   + A+ I +    R+   W  +I G VQN   V A+  F  +L  
Sbjct: 43  FLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFSDMLS- 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----------- 366
           D +  +D TF   L A + L+    G+QLHA  +K       FV   V            
Sbjct: 102 DCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLND 161

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V + +  R++ +WN  IS  V +G  ++ ++   E+ + G   DS+T    L+A S+
Sbjct: 162 AYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSD 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
                 G Q H +++R G      + + LID Y K G ++ +  +F++   G+R+  +W+
Sbjct: 222 KLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDR--MGERNSVSWS 279

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           ++IA Y QN   E+A   F +  + ++ P    ++SVL AC  +  IE G+ +   +++ 
Sbjct: 280 SLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKA 339

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            ++QN+FV ++L+DMY K G I+ A   F  +PE+N V++  ++ GY   G + +A++L 
Sbjct: 340 CVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALL 399

Query: 603 RSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
             M    GI P  ++ +  LSACS AG +  G++IF+ M++ Y ++P  EHY C+ D+LG
Sbjct: 400 EEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLG 459

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G V  AY+F+K +     +  IWG+LLG+CR+HG  EL ++ A+KL E+D ++S  G 
Sbjct: 460 RAGMVECAYDFIKRMPFPPTI-SIWGALLGACRMHGKPELGKLAAEKLFELDPKDS--GN 516

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           HV+LSN++A  G WE V  VR EM+E G++K  G SWI V   ++ F +KD+ H +  +I
Sbjct: 517 HVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEKDPEI 576

Query: 782 YEMLERLAMEMRNAGN 797
            ++L +L  EM++A  
Sbjct: 577 QDILGKLRKEMQDAAG 592



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 239/513 (46%), Gaps = 48/513 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + +SV++     R+  +G+A H   ++    P   F+YN L+NMY+  L  L++  + L+
Sbjct: 8   SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAK-LDHLNSAKLILE 66

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                                R+VV W  +++  V+   +V A+  F  ML   +RP+  
Sbjct: 67  LAPC-----------------RSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDF 109

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V  A + L    +   ++ L VK G   +ND+FV  S   MY++LG  + A K+FD
Sbjct: 110 TFPCVLKASTGLRMDTTGKQLHALAVKEG--LINDVFVGCSVFDMYSKLGFLNDAYKVFD 167

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               RN E WN  I   V +  P +++  F+++L +     D +TF   L+A S    L 
Sbjct: 168 EMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKP-DSITFCXFLNACSDKLGLG 226

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G QLH +II++     V V N +I                    ER+ VSW+++I+A+V
Sbjct: 227 PGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYV 286

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           QN  +++   L    +K+        V+++L A + L   + G+   A  ++  +     
Sbjct: 287 QNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIF 346

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S L+DMY K G I  A Q F  N   +R+  +WNA++ GY   G   +A     +M  
Sbjct: 347 VASALVDMYGKCGSIDNAEQAF--NAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTS 404

Query: 507 -HNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              + P+ V++   L AC+  G+++ G K       RY ++        L+D+  ++G++
Sbjct: 405 AAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMV 464

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSE 596
             A +   ++P   +++    +LG  + HG  E
Sbjct: 465 ECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 9/283 (3%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEG-MESYLIDMYAKSGLIKTARQIFEK 470
           ++ +++  A ++R+  +G+  HA +L+     F   + ++L++MYAK   + +A+ I E 
Sbjct: 8   SLASVVELAVSVRSSLLGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILEL 67

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
                R   TW A+IAG  QNG    A + F  ML   V PN  T   VL A   +    
Sbjct: 68  APC--RSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDT 125

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GKQLH  +++  L  +VFVG S+ DMYSK G +N A  VF ++P +N  T+   I    
Sbjct: 126 TGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSV 185

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPS 649
            HG  E ++  F  +   G +PD+ITF   L+ACS    +  G Q+   +++  Y    S
Sbjct: 186 LHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVS 245

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             +   + D  G+ G+V  +      +GE  +V   W SL+ +
Sbjct: 246 VSNG--LIDFYGKCGEVECSEMVFDRMGERNSV--SWSSLIAA 284



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 22/295 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +       WN  I   V +  P ++++ + ++ +       D+ T+   L AC
Sbjct: 162 AYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKP--DSITFCXFLNAC 219

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L  G  +H   IR     +  V N L++ Y  C     +EMV             
Sbjct: 220 SDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMV------------- 266

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                FD M  RN V+W+++++ YV+     +A   F    +  I P+     +V  A +
Sbjct: 267 -----FDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L + +    V  L VK   E   ++FVAS+ + MY + G  D A + F+   ERN   W
Sbjct: 322 GLSEIEFGRSVQALAVKACVE--QNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSW 379

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N ++GGY    H  +A+ L  ++     IV   V+ + ALSA S+  +L  G ++
Sbjct: 380 NALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKI 434



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 21/198 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    +  +FD +    +V W+++I  +V NN   +A  L+ + +K     +  ++  SS
Sbjct: 258 GEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPT--DFMVSS 315

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL ACA    +  G++V    ++     + FV ++L++MY  C S  +AE          
Sbjct: 316 VLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAE---------- 365

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVN 231
                   + F+ M  RN+V+WN ++  Y       +AV     M    GI PS +S + 
Sbjct: 366 --------QAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLIC 417

Query: 232 VFPALSSLGDYKSADVVY 249
              A S  GD K+   ++
Sbjct: 418 ALSACSRAGDLKTGMKIF 435


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 305/560 (54%), Gaps = 36/560 (6%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +  + MY++L   + A+ +      R    W ++I G V N     A+  F   +  
Sbjct: 44  FLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSN-MRR 102

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV---------------- 367
           + ++ +D TF     A + L     G+QLHA  +K    L V V                
Sbjct: 103 ECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPE 162

Query: 368 ----LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                + +  R++ +WN  +S  VQ+G   + +    +        +++T  A L+A ++
Sbjct: 163 ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 424 LRNQDVGKQTHAYLLRHGIH-----FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           + + ++G+Q H +++R         F G    LID Y K G I ++  +F +  SG R+ 
Sbjct: 223 IVSLELGRQLHGFIVRSRYREDVSVFNG----LIDFYGKCGDIVSSELVFSRIGSGRRNV 278

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +W +++A   QN   E A + F Q     V P    I+SVL AC  +G +ELG+ +H  
Sbjct: 279 VSWCSLLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSACAELGGLELGRSVHAL 337

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           +++  +++N+FVG++L+D+Y K G I YA  VF ++PE+N VT+  MI GY   G  + A
Sbjct: 338 ALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMA 397

Query: 599 LSLFRSMK--GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
           LSLF+ M    CGI    +T V+VLSACS AG V+ GLQIF+ M+  Y I+P  EHY CV
Sbjct: 398 LSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACV 457

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+LGR G V  AYEF+K +     +  +WG+LLG+C++HG ++L ++ A+KL E+D  +
Sbjct: 458 VDLLGRSGLVDRAYEFIKRMPILPTI-SVWGALLGACKMHGKTKLGKIAAEKLFELDPDD 516

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           S  G HV+ SN+ A  G WE    VRKEMR+ G++K VG SW+ V   V+ F +KD  H 
Sbjct: 517 S--GNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHE 574

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           ++ +I  ML +L  EM+ AG
Sbjct: 575 KNSEIQAMLAKLRGEMKKAG 594



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 252/519 (48%), Gaps = 64/519 (12%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S L++   +R+  +G+AVH H +R    P   F+ N L+NMYS       A++V      
Sbjct: 12  SFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLV------ 65

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                             R VV W +++S  V   R+  A+  F  M R  + P+  +F 
Sbjct: 66  ------------LSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFP 113

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            VF A +SL    +   ++ L +K G+  + D+FV  SA  MY++ G    AR +FD   
Sbjct: 114 CVFKASASLHMPVTGKQLHALALKGGN--ILDVFVGCSAFDMYSKTGLRPEARNMFDEMP 171

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   WN  +   VQ+   ++AI  F + L +D    + +TF + L+A + +  L+LG+
Sbjct: 172 HRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEP-NAITFCAFLNACADIVSLELGR 230

Query: 351 QLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMISAFVQ 388
           QLH +I+++     V V N +I+                      R+VVSW ++++A VQ
Sbjct: 231 QLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQ 290

Query: 389 NGLDDEGLMLVYEMQKQ----GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH- 443
           N  ++   M+  + +K+     FMI SV     LSA + L   ++G+  HA  L+  +  
Sbjct: 291 NHEEERACMVFLQARKEVEPTDFMISSV-----LSACAELGGLELGRSVHALALKACVEE 345

Query: 444 --FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             F G  S L+D+Y K G I+ A Q+F   +  +R+  TWNAMI GY   G ++ A   F
Sbjct: 346 NIFVG--SALVDLYGKCGSIEYAEQVFR--EMPERNLVTWNAMIGGYAHLGDVDMALSLF 401

Query: 502 RQMLEHN--VTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMY 558
           ++M   +  +  + VT+ SVL AC+  G +E G Q+      RY ++        ++D+ 
Sbjct: 402 QEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLL 461

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSE 596
            +SG+++ A     ++P   +++    +LG  + HG ++
Sbjct: 462 GRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK 500



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 209/475 (44%), Gaps = 54/475 (11%)

Query: 60  QLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           QL  S+T P TV+ W ++I G V N     A+L +S M++       +++T+  V KA A
Sbjct: 63  QLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLP--NDFTFPCVFKASA 120

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
                  GK +H   ++  +    FV  S  +MYS           GL+    +      
Sbjct: 121 SLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSK---------TGLRPEARN------ 165

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
              +FD M  RN+  WN  +S  V+  R ++A+  F+  L +   P+ I+F     A + 
Sbjct: 166 ---MFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NCLERNTEV 296
           +   +    ++G +V+  S Y  D+ V +  I  Y + G    +  +F       RN   
Sbjct: 223 IVSLELGRQLHGFIVR--SRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVS 280

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +++   VQN+    A  +F+Q  +  E+   D    S LSA ++L  L+LG+ +HA  
Sbjct: 281 WCSLLAALVQNHEEERACMVFLQARK--EVEPTDFMISSVLSACAELGGLELGRSVHALA 338

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +K  V   + V +A++                    ER++V+WN MI  +   G  D  L
Sbjct: 339 LKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMAL 398

Query: 397 MLVYEMQKQ--GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--L 451
            L  EM     G  +  VT+ ++LSA S     + G Q    +  R+GI   G E Y  +
Sbjct: 399 SLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIE-PGAEHYACV 457

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +D+  +SGL+  A + F K        + W A++     +G  +   +A  ++ E
Sbjct: 458 VDLLGRSGLVDRAYE-FIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFE 511



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/464 (22%), Positives = 188/464 (40%), Gaps = 75/464 (16%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYS 111
           RP  AR +FD +       WN  +   V +    +AI  + +       P    +  T+ 
Sbjct: 160 RPE-ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEP----NAITFC 214

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           + L ACA+  +L +G+ +H   +R        V+N L++ Y  C   + +E+V       
Sbjct: 215 AFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELV------- 267

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
            +S+            RRNVV+W ++++  V+      A   F +  R  + P+     +
Sbjct: 268 -FSRIG--------SGRRNVVSWCSLLAALVQNHEEERACMVF-LQARKEVEPTDFMISS 317

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A + LG  +    V+ L +K   E   ++FV S+ + +Y + G  ++A ++F    E
Sbjct: 318 VLSACAELGGLELGRSVHALALKACVE--ENIFVGSALVDLYGKCGSIEYAEQVFREMPE 375

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDDVTFLSALSAVSQLQELDLGQ 350
           RN   WN MIGGY        A+ LF ++      I    VT +S LSA S+   ++ G 
Sbjct: 376 RNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGL 435

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           Q+   +   +           IE     +  ++    ++GL D      YE  K+  ++ 
Sbjct: 436 QIFESMRGRY----------GIEPGAEHYACVVDLLGRSGLVDRA----YEFIKRMPILP 481

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIK-TARQIFE 469
           +++V   L  A                                M+ K+ L K  A ++FE
Sbjct: 482 TISVWGALLGACK------------------------------MHGKTKLGKIAAEKLFE 511

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            +     +   ++ M+A     G  EEA +  ++M +  +  NV
Sbjct: 512 LDPDDSGNHVVFSNMLA---SAGRWEEATIVRKEMRDIGIKKNV 552


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 205/608 (33%), Positives = 322/608 (52%), Gaps = 79/608 (12%)

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           AW++I+  Y        +   F  M  + + P+   F ++  A + L  +K A  ++   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           V+LG +  +DL++A                               N +I  Y + ++  +
Sbjct: 137 VRLGLD--SDLYIA-------------------------------NALINTYAKFHNAGK 163

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
             ++F +  E            S +  V ++                F  +PV       
Sbjct: 164 VFDVFPKRGE------------SGIDCVKKV----------------FDMMPV------- 188

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGK 431
            RDVVSWNT+I+ F QNG+  E L +V EM K G +  DS T++++L   +   + + GK
Sbjct: 189 -RDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGK 247

Query: 432 QTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           + H Y +R+G  F+G   + S LIDMYAK   ++ + + F       +D  +WN++IAG 
Sbjct: 248 EIHGYAVRNG--FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPR--KDAISWNSIIAGC 303

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            QNG  +     FR+ML+ NV P  V+ +SV+PAC  +  + LG+QLHG  +R   D N 
Sbjct: 304 VQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNE 363

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           F+ +SL+DMY+K G I  A  VF +I +++ V +T +I+G   HG +  A+SLF +M   
Sbjct: 364 FIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLED 423

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           G+ P  + F+AVL+ACS+AGLVDEG + F+ M++++ I P  EHY  VAD+LGR G++ E
Sbjct: 424 GVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEE 483

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           AY+F+  +        +W  LL +CR H   ELAE V  KLL +D+ N   G +VL+SNI
Sbjct: 484 AYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENM--GAYVLMSNI 541

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           Y+    W++  ++R  MR++GL+K   CSWI+VG  V+ F + D+ HP   KI + L+ L
Sbjct: 542 YSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVL 601

Query: 789 AMEMRNAG 796
             +M   G
Sbjct: 602 LEQMEKEG 609



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 157/306 (51%), Gaps = 22/306 (7%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           +++FD +     V WNT+I GF  N +  EA+ +  +M K+      D++T SS+L   A
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKP-DSFTLSSILPIFA 238

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  ++  GK +H + +R   +   F+ +SL++MY+ C                  ++ + 
Sbjct: 239 EHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKC------------------NRLEC 280

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             + F  + R++ ++WN+I++  V+   +   +  FR ML+  ++P  +SF +V PA + 
Sbjct: 281 SLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAH 340

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L        ++G +V+LG  + ++ F+ASS + MYA+ G    AR +FD   +R+   W 
Sbjct: 341 LTALSLGRQLHGCIVRLG--FDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWT 398

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I G   + H ++A+ LF  +LE D +    V F++ L+A S    +D G +    + +
Sbjct: 399 AIIMGCAMHGHALDAVSLFENMLE-DGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER 457

Query: 359 NFVALP 364
           +F   P
Sbjct: 458 DFGIAP 463



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 211/456 (46%), Gaps = 31/456 (6%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           W++II  +  ++L + +   ++ M+  S     + + + S+LKA    ++ ++  ++H  
Sbjct: 78  WSSIIKCYTSHSLLHLSFSSFNSMRSLS--VPPNRHVFPSLLKASTLLKHHKLAHSLHAC 135

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            +R   +   ++ N+L+N Y+   ++     V  K  E   S  D V KVFD M  R+VV
Sbjct: 136 TVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGE---SGIDCVKKVFDMMPVRDVV 192

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           +WNT+++ + +   YVEA+   R M + G ++P + +  ++ P  +   D      ++G 
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            V+ G  +  D+F+ SS I MYA+    + + + F     ++   WN++I G VQN    
Sbjct: 253 AVRNG--FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFD 310

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPV 365
             +  F ++L+ + +    V+F S + A + L  L LG+QLH  I++       F+A  +
Sbjct: 311 RGLGFFRRMLK-ENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSL 369

Query: 366 I--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +              V + + +RD+V+W  +I     +G   + + L   M + G     
Sbjct: 370 VDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCY 429

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
           V   A+L+A S+    D G +    + R      G+E Y  + D+  ++G ++ A     
Sbjct: 430 VAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFIS 489

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                    + W+ ++A    +  +E A     ++L
Sbjct: 490 NMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLL 525


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 192/550 (34%), Positives = 305/550 (55%), Gaps = 29/550 (5%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY++L   + AR +      RN   W ++I G  QN H   A+  F + +  + +V +D 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRREGVVPNDF 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV--------------------LNAV 371
           TF  A  AV+ L+    G+Q+HA  +K    L V V                     + +
Sbjct: 60  TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            ER++ +WN  IS  V +G   E +    E ++     +S+T  A L+A S+  + ++G 
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H  +LR G   +  + + LID Y K   I+++  IF   + G ++  +W +++A Y Q
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF--TEMGTKNAVSWCSLVAAYVQ 237

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           N   E+A V + +  +  V  +   I+SVL AC  M  +ELG+ +H  +++  +++ +FV
Sbjct: 238 NHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFV 297

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM--KGC 608
           G++L+DMY K G I  +   F ++PEKN VT  ++I GY   G  + AL+LF  M  +GC
Sbjct: 298 GSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC 357

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           G  P+ +TFV++LSACS AG V+ G++IFD M+  Y I+P  EHY C+ DMLGR G V  
Sbjct: 358 GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVER 417

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           AYEF+K++  +  +  +WG+L  +CR+HG  +L  + A+ L ++D ++S  G HVLLSN 
Sbjct: 418 AYEFIKKMPIQPTI-SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS--GNHVLLSNT 474

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           +A  G W   + VR+E++  G++K  G SWI V   V+ F +KD+ H  + +I   L +L
Sbjct: 475 FAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 534

Query: 789 AMEMRNAGNK 798
             EM  AG K
Sbjct: 535 RNEMEAAGYK 544



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 214/420 (50%), Gaps = 35/420 (8%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           RNVV+W +++S   +   +  A+ +F  M R G+ P+  +F   F A++SL    +   +
Sbjct: 21  RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 80

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L VK G   + D+FV  SA  MY +    D ARK+FD   ERN E WN  I   V + 
Sbjct: 81  HALAVKCGR--ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 138

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
            P EAIE F++   +D    + +TF + L+A S    L+LG QLH  ++++     V V 
Sbjct: 139 RPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 197

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           N +I+                    ++ VSW ++++A+VQN  D++  +L    +K    
Sbjct: 198 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 257

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTAR 465
                ++++LSA + +   ++G+  HA+ ++  +    F G  S L+DMY K G I+ + 
Sbjct: 258 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG--SALVDMYGKCGCIEDSE 315

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV--TPNVVTIASVLPAC 523
           Q F+  +  +++  T N++I GY   G ++ A   F +M       TPN +T  S+L AC
Sbjct: 316 QAFD--EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSAC 373

Query: 524 NPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           +  G +E G ++   S+R  Y ++      + ++DM  ++G++  A     K+P + +++
Sbjct: 374 SRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 432



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 49/441 (11%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR +         V W ++I G   N     A++ + +M++       +++T+    
Sbjct: 8   PESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP--NDFTFPCAF 65

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KA A  R    GK +H   ++C      FV  S  +MY       DA             
Sbjct: 66  KAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR------------ 113

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 K+FD +  RN+  WN  +S  V   R  EA+  F    R+   P++I+F     
Sbjct: 114 ------KLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLN 167

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A S          ++GL+++ G  +  D+ V +  I  Y +      +  IF     +N 
Sbjct: 168 ACSDWLHLNLGMQLHGLVLRSG--FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 225

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W +++  YVQN+   +A  L+++  + D +   D    S LSA + +  L+LG+ +HA
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVETSDFMISSVLSACAGMAGLELGRSIHA 284

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
           + +K  V   + V +A++                    E+++V+ N++I  +   G  D 
Sbjct: 285 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDM 344

Query: 395 GLMLVYEMQKQGF--MIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY- 450
            L L  EM  +G     + +T  +LLSA S     + G +    +   +GI   G E Y 
Sbjct: 345 ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE-PGAEHYS 403

Query: 451 -LIDMYAKSGLIKTARQIFEK 470
            ++DM  ++G+++ A +  +K
Sbjct: 404 CIVDMLGRAGMVERAYEFIKK 424


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/590 (34%), Positives = 320/590 (54%), Gaps = 46/590 (7%)

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           Y    +V+G ++K G    ++ FV S  + +YA+ G  + AR++F+N   RN   W T++
Sbjct: 80  YSGTQIVHGHVMKTGCH--DNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLM 137

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAYIIKNF 360
            G+VQN+ P  AI +F ++L      +  +  LSA L A S LQ L LG Q HAYIIK  
Sbjct: 138 VGFVQNSQPKHAIHVFQEMLYAGS--YPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYH 195

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +     V +A+                     E++V+SW + +SA   NG   +GL L  
Sbjct: 196 LDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFV 255

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAK 457
           EM  +    +  T+T+ LS    + + ++G Q  +  ++ G  +E    + + L+ +Y K
Sbjct: 256 EMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFG--YESNLRVRNSLLYLYLK 313

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL-----------EEAFVAFRQMLE 506
           SG I  A + F + D  D    TWNAMIAG+ Q   L            EA   F ++ +
Sbjct: 314 SGFIVEAHRFFNRMD--DVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQ 371

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P++ T++SVL  C+ M  IE G+Q+H  +I+     +V V TSLI MY+K G I  
Sbjct: 372 SGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIER 431

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A+  F ++  +  + +T+MI G+ QHGMS++AL +F  M   G+ P+ +TFV VLSACS+
Sbjct: 432 ASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSH 491

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AG+V + L  F++MQ++YKI+P  +HY C+ DM  R+G++ +A  F+K++  E +   IW
Sbjct: 492 AGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF-IW 550

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            + +  CR HG+ EL    +++LL +  ++  P  +VLL N+Y     +++V +VRK M 
Sbjct: 551 SNFIAGCRSHGNLELGFYASEQLLSLKPKD--PETYVLLLNMYLSADRFDDVSRVRKMME 608

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              + K    SWI +   V  F + D+ HP S  I + LE L  + +N G
Sbjct: 609 VEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLG 658



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 262/571 (45%), Gaps = 64/571 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L+ C + R+    + VH H ++   + + FV + L+N+Y+ C +  DA        
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDAR------- 119

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VF+ M RRNVVAW T++  +V+  +   A+  F+ ML  G  PS  + 
Sbjct: 120 -----------RVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTL 168

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A SSL   K  D  +  ++K   ++  D  V S+   +Y++ G  + A K F   
Sbjct: 169 SAVLHACSSLQSLKLGDQFHAYIIKYHLDF--DTSVGSALCSLYSKCGRLEDALKAFSRI 226

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   W + +     N  PV+ + LFV+++  ++I  ++ T  SALS   ++  L+LG
Sbjct: 227 REKNVISWTSAVSACGDNGAPVKGLRLFVEMIS-EDIKPNEFTLTSALSQCCEIPSLELG 285

Query: 350 QQ--------------------LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ- 388
            Q                    L+ Y+   F+       N + +  +V+WN MI+   Q 
Sbjct: 286 TQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQM 345

Query: 389 -----NGLD-----DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
                + L       E L +  ++ + G   D  T++++LS  S +   + G+Q HA  +
Sbjct: 346 MELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTI 405

Query: 439 RHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + G   + + S  LI MY K G I+ A + F +  +  R    W +MI G++Q+G+ ++A
Sbjct: 406 KTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMST--RTMIAWTSMITGFSQHGMSQQA 463

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSL 554
              F  M    V PN VT   VL AC+  G +   + L+ F I   +Y +   +     +
Sbjct: 464 LHIFEDMSLAGVRPNTVTFVGVLSACSHAGMV--SQALNYFEIMQKKYKIKPVMDHYECM 521

Query: 555 IDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP- 612
           +DM+ + G +  A N   K+  E +   ++  I G   HG  E  L  + S +   ++P 
Sbjct: 522 VDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLE--LGFYASEQLLSLKPK 579

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           D  T+V +L+    A   D+  ++  +M+ E
Sbjct: 580 DPETYVLLLNMYLSADRFDDVSRVRKMMEVE 610



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 221/492 (44%), Gaps = 79/492 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+++ R   V W T+++GFV N+ P  AI ++ +M  +  Y S   YT S+VL AC
Sbjct: 118 ARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSI--YTLSAVLHAC 175

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  ++L++G   H + I+   +    V ++L ++YS C    DA                
Sbjct: 176 SSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDA---------------- 219

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F  +R +NV++W + VS        V+ +R F  M+   I+P+  +  +      
Sbjct: 220 --LKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCC 277

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   +    V  L +K G  Y ++L V +S +++Y + G    A + F+   + +   W
Sbjct: 278 EIPSLELGTQVCSLCIKFG--YESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTW 335

Query: 298 NTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           N MI G+ Q                EA+++F + L    +  D  T  S LS  S++  +
Sbjct: 336 NAMIAGHAQMMELTKDNLSACQRGSEALKIFSK-LNQSGMKPDLFTLSSVLSVCSRMLAI 394

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G+Q+HA  IK      VIV  ++I                     R +++W +MI+ F
Sbjct: 395 EQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGF 454

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFE 445
            Q+G+  + L +  +M   G   ++VT   +LSA S           HA ++   + +FE
Sbjct: 455 SQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACS-----------HAGMVSQALNYFE 503

Query: 446 GMESY------------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            M+              ++DM+ + G ++ A    +K +  +  +  W+  IAG   +G 
Sbjct: 504 IMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNY-EPSEFIWSNFIAGCRSHGN 562

Query: 494 LEEAFVAFRQML 505
           LE  F A  Q+L
Sbjct: 563 LELGFYASEQLL 574


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/648 (31%), Positives = 347/648 (53%), Gaps = 37/648 (5%)

Query: 175 KYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISF- 229
           K   +CK   +FD M  R+ ++W T+++ YV      EA+  F  M +  G  P    F 
Sbjct: 69  KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPG--PQRDQFM 126

Query: 230 VNVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           ++V     +LG +    ++++G  VK G   ++ +FV+S+ I MY ++G  +   ++F+ 
Sbjct: 127 ISVALKACALGVNICFGELLHGFSVKSG--LIHSVFVSSALIDMYMKVGKIEQGCRVFEK 184

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + RN   W  +I G V   + +E +  F ++    ++ +D  TF  AL A +    L  
Sbjct: 185 MMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWR-SKVGYDSHTFAIALKASADSSLLHH 243

Query: 349 GQQLHAYIIKNFVALPVIVLNAV----------------IER----DVVSWNTMISAFVQ 388
           G+ +H   IK        V+N +                 E+    DVVSW T+IS +VQ
Sbjct: 244 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQ 303

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGM 447
            G ++  +     M+K     +  T  A++S+ +NL     G+Q H ++LR G ++   +
Sbjct: 304 MGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSV 363

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + +I +Y+K GL+K+A  +F  +    +D  +W+ +I+ Y+Q G  +EAF     M   
Sbjct: 364 ANSIITLYSKCGLLKSASLVF--HGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRRE 421

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
              PN   ++SVL  C  M  +E GKQ+H   +   +D    V +++I MYSK G +  A
Sbjct: 422 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEA 481

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
           + +F  +   + +++T MI GY +HG S+ A++LF  +   G++PD + F+ VL+AC++A
Sbjct: 482 SKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHA 541

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           G+VD G   F LM   Y+I PS EHY C+ D+L R G++ EA   ++ +    + + +W 
Sbjct: 542 GMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDV-VWS 600

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL +CR+HG  +     A++LL++D  ++  G H+ L+NIYA +G W+    +RK M+ 
Sbjct: 601 TLLRACRVHGDVDRGRWTAEQLLQLDPNSA--GTHITLANIYAAKGRWKEAAHIRKLMKS 658

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           +G+ KE G SW++V   +N F + DQ HPQS  I  +L+ L+  + +A
Sbjct: 659 KGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANIGDA 706



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/649 (24%), Positives = 297/649 (45%), Gaps = 62/649 (9%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S L ++ ++G+   AR +FD +T    + W T+I G+V  +  YEA++L+S M    P
Sbjct: 60  LNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM-WVHP 118

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D +  S  LKACA   N+  G+ +H   ++     S FV ++L++MY         
Sbjct: 119 GPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMY--------- 169

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                    +   K +  C+VF+ M  RNVV+W  I++  V     +E +  F  M R  
Sbjct: 170 ---------MKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSK 220

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           +   + +F     A +          ++   +K G  +    FV ++   MY + G  D+
Sbjct: 221 VGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQG--FDESSFVINTLATMYNKCGKPDY 278

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             ++F+     +   W T+I  YVQ      A+E F + +    +  +  TF + +S+ +
Sbjct: 279 VMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAF-KRMRKSYVSPNKYTFAAVISSCA 337

Query: 342 QLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNT 381
            L     G+Q+H ++++                      +    +V + +  +D++SW+T
Sbjct: 338 NLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWST 397

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +IS + Q G   E    +  M+++G   +   ++++LS   ++   + GKQ HA+LL  G
Sbjct: 398 IISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIG 457

Query: 442 IHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           I  E M  S +I MY+K G ++ A +IF  N     D  +W AMI GY ++G  +EA   
Sbjct: 458 IDHEAMVHSAIISMYSKCGSVQEASKIF--NGMKINDIISWTAMINGYAEHGYSQEAINL 515

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT-------S 553
           F ++    + P+ V    VL ACN  G ++LG         ++L  NV+  +        
Sbjct: 516 FEKISSVGLKPDYVMFIGVLTACNHAGMVDLG------FYYFMLMTNVYRISPSKEHYGC 569

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           LID+  ++G ++ A ++   +P   + V ++T++     HG  +R    + + +   ++P
Sbjct: 570 LIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRG--RWTAEQLLQLDP 627

Query: 613 D-AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           + A T + + +  +  G   E   I  LM+ +  I+     +  V D L
Sbjct: 628 NSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQL 676



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 4/317 (1%)

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNT 381
           E  E++   +    A +A S    L+L  +L   + +  +     + + +  RD +SW T
Sbjct: 34  ECRELIQQPIQEQPAENAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTT 93

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +I+ +V      E L+L   M    G   D   ++  L A +   N   G+  H + ++ 
Sbjct: 94  LIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKS 153

Query: 441 G-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G IH   + S LIDMY K G I+   ++FEK  +  R+  +W A+IAG    G   E  +
Sbjct: 154 GLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMT--RNVVSWTAIIAGLVHAGYNMEGLL 211

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +M    V  +  T A  L A      +  GK +H  +I+   D++ FV  +L  MY+
Sbjct: 212 YFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYN 271

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G  +Y   +F K+   + V++TT+I  Y Q G  E A+  F+ M+   + P+  TF A
Sbjct: 272 KCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAA 331

Query: 620 VLSACSYAGLVDEGLQI 636
           V+S+C+       G QI
Sbjct: 332 VISSCANLAAAKWGEQI 348


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 347/689 (50%), Gaps = 79/689 (11%)

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           L+  KA+  H      + +  V+N++    S    S +A + G     +  SK++L   +
Sbjct: 50  LKWNKAISTHMRNGHCDSALHVFNTMPRRSSV---SYNAMISGY----LRNSKFNLARNL 102

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD M  R++ +WN +++ YV+  R  +A R F +M      P                  
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM------PE----------------- 139

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                              D+   +S +  YA+ G  D AR++FDN  E+N+  WN ++ 
Sbjct: 140 ------------------KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLA 181

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFD-------------DVTFLSALSAVSQLQELDLG 349
            YV N    EA  LF    + D I ++             D  +L     +     +   
Sbjct: 182 AYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL--FDKMPVRDAISWN 239

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
             +  Y     ++    + +    RDV +W  M+S +VQNG+ DE      EM ++    
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK---- 295

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
           + V+  A+++     +  D+ ++     L   +    + S+  +I  Y + G I  AR+ 
Sbjct: 296 NEVSYNAMIAGYVQTKKMDIARE-----LFESMPCRNISSWNTMITGYGQIGDIAQARKF 350

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+      RD  +W A+IAGY Q+G  EEA   F ++ +   + N  T    L  C  + 
Sbjct: 351 FDMMPQ--RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            +ELGKQ+HG +++       FVG +L+ MY K G I+ A + F  I EK+ V++ TM+ 
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GY +HG   +AL++F SMK  G++PD IT V VLSACS+ GL+D G + F  M ++Y + 
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVI 528

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P+++HY C+ D+LGR G++ EA + ++ +  +      WG+LLG+ R+HG++EL E  A+
Sbjct: 529 PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS-WGALLGASRIHGNTELGEKAAE 587

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            + +M+ +NS  G +VLLSN+YA  G W + DK+R +MR+ G++K  G SW++V   ++ 
Sbjct: 588 MVFKMEPQNS--GMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F+  D  HP+  +IY  LE L ++MR  G
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEG 674



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 238/589 (40%), Gaps = 112/589 (19%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +  + +S   +  + +LAR LFD +       WN ++ G+V N    +A  L+
Sbjct: 75  MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN---PSRFVYNSLLN 150
             M +       D  +++S+L   A+   +   + V       F N    +   +N LL 
Sbjct: 135 DLMPEK------DVVSWNSLLSGYAQNGYVDEAREV-------FDNMPEKNSISWNGLLA 181

Query: 151 MY-------STCL---SSLDAEMVGLKYVE---VDYSKYDLVCKVFDTMRRRNVVAWNTI 197
            Y         CL   S  D +++    +    V   K      +FD M  R+ ++WNT+
Sbjct: 182 AYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241

Query: 198 VSWYVKTERYVEAVRQF---------------RMMLRMGIRPSTISFVNVFPALSSLGDY 242
           +S Y +     +A R F                  ++ G+     +F +  P  + +  Y
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-SY 300

Query: 243 KSADVVYGLLVKLGSEYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCLERN 293
            +  ++ G +     +   +LF +         ++ I  Y ++G    ARK FD   +R+
Sbjct: 301 NA--MIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRD 358

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  +I GY Q+ H  EA+ +FV++ + D    +  TF  ALS  + +  L+LG+Q+H
Sbjct: 359 CVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESLNRATFGCALSTCADIAALELGKQIH 417

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
              +K        V NA++                    E+DVVSWNTM++ + ++G   
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           + L +   M+  G   D +T+  +LSA S           H  LL  G        Y   
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACS-----------HTGLLDRGT------EYFYS 520

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           M    G+I T++               +  MI    + G LEEA    R M      P  
Sbjct: 521 MTKDYGVIPTSKH--------------YTCMIDLLGRAGRLEEAQDLIRNM---PFQPGA 563

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            +  ++L A    GN ELG++      + +  QN  +   L ++Y+ SG
Sbjct: 564 ASWGALLGASRIHGNTELGEKAAEMVFK-MEPQNSGMYVLLSNLYAASG 611



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 210/466 (45%), Gaps = 45/466 (9%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+   + AI  +   G  D A  +F+    R++  +N MI GY++N+    A  LF Q+ 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 322 ELDEIVFD--------DVTFLSALSAVSQLQELDL---GQQLHAYIIKNFVALPVIVLNA 370
           E D   ++        +     A      + E D+      L  Y    +V     V + 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           + E++ +SWN +++A+V NG  +E  +L +E +      D ++   L+     +R + +G
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLL-FESKSD---WDLISWNCLMGGF--VRKKKLG 221

Query: 431 KQTHAY---LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                +    +R  I +  M    I  YA+ G +  AR++F+  +S  RD  TW AM++G
Sbjct: 222 DARWLFDKMPVRDAISWNTM----ISGYAQGGGLSQARRLFD--ESPTRDVFTWTAMVSG 275

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           Y QNG+L+EA   F +M E N       IA  +        +++ ++L       +  +N
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT----KKMDIAREL----FESMPCRN 327

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           +    ++I  Y + G I  A   F  +P+++ V++  +I GY Q G  E AL++F  +K 
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD----MLGRV 663
            G   +  TF   LS C+    ++ G QI     Q  K+   T   C V +    M  + 
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQIHG---QAVKMGYGTG--CFVGNALLAMYFKC 442

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
           G + EA +  + + EE +V+  W ++L     HG    A  V + +
Sbjct: 443 GSIDEANDTFEGI-EEKDVVS-WNTMLAGYARHGFGRQALTVFESM 486



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/402 (22%), Positives = 178/402 (44%), Gaps = 60/402 (14%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA---------A 421
           V + D++ WN  IS  ++NG  D  L +   M ++     SV+  A++S          A
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLA 99

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            NL +Q   +   ++            + ++  Y ++  +  AR++F+     ++D  +W
Sbjct: 100 RNLFDQMPERDLFSW------------NVMLTGYVRNCRLGDARRLFDLMP--EKDVVSW 145

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N++++GY QNG ++EA   F  M E     N ++   +L A    G IE    L      
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLL----FE 197

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
              D ++     L+  + +   +  A  +F K+P ++++++ TMI GY Q G   +A  L
Sbjct: 198 SKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRL 257

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F          D  T+ A++S     G++DE    FD M ++ ++  +       A + G
Sbjct: 258 FDESP----TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYN-------AMIAG 306

Query: 662 RVGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRLHGHSELAEVV-AKKLLEMDTRNSM 718
            V    +  +  +EL E      I  W ++     + G+ ++ ++  A+K  +M  +   
Sbjct: 307 YV--QTKKMDIARELFESMPCRNISSWNTM-----ITGYGQIGDIAQARKFFDMMPQRDC 359

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGL---RKEVGCS 757
             +  +++  YA+ G++E    +  E+++ G    R   GC+
Sbjct: 360 VSWAAIIAG-YAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  + ++   Q G    AR+ FD + +   V W  II G+  +    EA
Sbjct: 319 LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + ++ ++K+     S +  T+   L  CA+   L +GK +H   ++       FV N+LL
Sbjct: 379 LNMFVEIKQDGE--SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MY  C S                   D     F+ +  ++VV+WNT+++ Y +     +
Sbjct: 437 AMYFKCGS------------------IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQ 478

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           A+  F  M   G++P  I+ V V  A S  G
Sbjct: 479 ALTVFESMKTAGVKPDEITMVGVLSACSHTG 509


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/620 (32%), Positives = 325/620 (52%), Gaps = 60/620 (9%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM--GIRPSTISFVNVFPALSS 238
           +VFD    R++ AW +I+S   +  R+ + +R F  ML       P+      V    + 
Sbjct: 79  RVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAG 138

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           LGD +S   ++G +++ G     D+ + ++ + MYA+ G    AR+ F    +++   WN
Sbjct: 139 LGDVESGRRIHGWILRSG--VCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWN 196

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I   +Q+   V A +LF      DE         S+L                     
Sbjct: 197 IVIRACLQDGDLVGATQLF------DE---------SSL--------------------- 220

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          RDV SWNT++S  +++G   E L  + +M + G    + T + + 
Sbjct: 221 ---------------RDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVF 265

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK-NDSGDR 476
           + A  L ++D+G+Q H  ++   +  +  +   L+DMY K G +++A  IF++ +D  + 
Sbjct: 266 ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTED 325

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
            Q  W+ M+AGY QNG  EEA   FR+ML   V      + SV  AC   G +E G+Q+H
Sbjct: 326 RQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVH 385

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           GF  +     +  + ++++DMYSKSG +  A  +F     KN   +TTM+  Y  HG   
Sbjct: 386 GFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGR 445

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL +F  MK   I P+ IT VAVLSACS++GLV +G   F+LMQ+EY I P+TEHY C+
Sbjct: 446 MALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCM 505

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            D+ GR G + +A  F++E  +  +   +W +LL +CRLH H E A++ ++KL++++  +
Sbjct: 506 VDLYGRAGLLDKAKNFIEE-NKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYD 564

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           +  G +VL+SN+YA    W +  K+R  M+ER +RK+ G SWI +   V+RF + D  HP
Sbjct: 565 A--GSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHP 622

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           +S +IY  LE+L   ++  G
Sbjct: 623 RSAEIYAYLEKLMERLKEMG 642



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/500 (22%), Positives = 216/500 (43%), Gaps = 64/500 (12%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H A ++FD     +   W +II G        + +  +++M      T+ + +  + VL+
Sbjct: 75  HNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLR 134

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
            CA   ++  G+ +H   +R    P   + N++L+MY+ C     A        + D + 
Sbjct: 135 CCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATS 194

Query: 176 YDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           +++V +             +FD    R+V +WNTIVS  ++     EA+ + + M+R G+
Sbjct: 195 WNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGV 254

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
             S  ++  VF     L        ++G +V    E   D FV  S + MY + G  + A
Sbjct: 255 TFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLE--EDAFVGCSLMDMYCKCGEMESA 312

Query: 283 RKIFD---NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             IFD   +  E     W+TM+ GYVQN    EA+E F ++L  + +        S  SA
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLR-EGVPAGQFILTSVASA 371

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSW 379
            +    ++ G+Q+H ++ K        + +A+++                    ++V  W
Sbjct: 372 CANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALW 431

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
            TM+ ++  +G     L +   M+ +  M + +T+ A+LSA S           H+ L+ 
Sbjct: 432 TTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACS-----------HSGLVS 480

Query: 440 HGIHFEGM--ESY-----------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
            G H+  +  E Y           ++D+Y ++GL+  A+   E+N     +   W  +++
Sbjct: 481 DGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKI-SHEAVVWKTLLS 539

Query: 487 GYTQNGLLEEAFVAFRQMLE 506
               +  +E A +A  ++++
Sbjct: 540 ACRLHKHIEYAQLASEKLVQ 559



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 160/351 (45%), Gaps = 30/351 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q+G    A QLFD  +      WNTI+ G + +    EA+    QM ++    S  NYTY
Sbjct: 204 QDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFS--NYTY 261

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S V        +  +G+ +H   +        FV  SL++MY  C      EM      E
Sbjct: 262 SMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKC-----GEM------E 310

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S +D   +  D    R   AW+T+V+ YV+  R  EA+  FR MLR G+        
Sbjct: 311 SALSIFD---RWSDFTEDRQ-FAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILT 366

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A ++ G  +    V+G + KLG  +  D  +AS+ + MY++ G  + A +IF +  
Sbjct: 367 SVASACANAGMVEQGRQVHGFVEKLGHRF--DAPLASAIVDMYSKSGSLEDACRIFRSAQ 424

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            +N  +W TM+  Y  +     A+E+F + ++ ++I+ +++T ++ LSA S    +  G 
Sbjct: 425 TKNVALWTTMLCSYASHGQGRMALEIFSR-MKAEKIMPNEITLVAVLSACSHSGLVSDGY 483

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                + + +  +P          +   +N M+  + + GL D+    + E
Sbjct: 484 HYFNLMQEEYGIVP----------NTEHYNCMVDLYGRAGLLDKAKNFIEE 524



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 4/144 (2%)

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH--NVTPNVVTIAS 518
           +  A ++F+   +  R    W ++I+G  + G   +   AF +ML+      PN   +A 
Sbjct: 74  LHNAHRVFDGTPT--RSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAG 131

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL  C  +G++E G+++HG+ +R  +  +V +  +++DMY+K G    A   F  + +K+
Sbjct: 132 VLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKD 191

Query: 579 SVTYTTMILGYGQHGMSERALSLF 602
           + ++  +I    Q G    A  LF
Sbjct: 192 ATSWNIVIRACLQDGDLVGATQLF 215


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 194/567 (34%), Positives = 305/567 (53%), Gaps = 29/567 (5%)

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           + + S +  D FVAS+   +Y  L   + ARK+FD     +T +WNT++ G   +    E
Sbjct: 148 LAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS----E 203

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+E FV++     +  D  T  S L A +++    +G+ +HA+  K  +A    V+  +I
Sbjct: 204 ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLI 263

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                                 D+V++N +IS +  NG+    + L  E+   G    S 
Sbjct: 264 SLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSS 323

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKN 471
           T+ AL+   S   ++ +    HA++++ G+     + + L  +Y +   + +AR+ F+  
Sbjct: 324 TLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAM 383

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
              ++   +WNAMI+GY QNGL E A   F+QM   NV PN +TI+S L AC  +G + L
Sbjct: 384 P--EKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSL 441

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           GK +H       L+ NV+V T+LIDMY K G I  A  +F  +  KN V++  MI GYG 
Sbjct: 442 GKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGL 501

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG    AL L++ M    + P + TF++VL ACS+ GLV EG  +F  M  +Y I P  E
Sbjct: 502 HGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIE 561

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           H  C+ D+LGR G++ EA+E + E  +      IWG+LLG+C +H   +LA++ ++KL E
Sbjct: 562 HCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFE 621

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           ++  N+  GY+VLLSN+Y  +  +     VR+E + R L K  GC+ I++G   + F + 
Sbjct: 622 LEPENT--GYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAG 679

Query: 772 DQEHPQSHKIYEMLERLAMEMRNAGNK 798
           D+ HPQS  IY  LE+L  +M  AG +
Sbjct: 680 DRAHPQSDAIYLYLEKLTAKMIEAGYR 706



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 207/469 (44%), Gaps = 74/469 (15%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R + AR++FD++  P TV+WNT++ G   +    EA+  + +M  +      D+ T +SV
Sbjct: 173 RGNDARKVFDAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRP-DSTTLASV 227

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L A AE  N  +G+ VH    +C       V   L+++Y+ C                  
Sbjct: 228 LPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKC------------------ 269

Query: 174 SKYDLVCK--VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
              D+ C   +FD M   ++V +N ++S Y        +V  F+ ++ MG+RPS+ + V 
Sbjct: 270 --GDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVA 327

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           + P  S  G    A  ++  +VK G +   +  V+++   +Y      D AR+ FD   E
Sbjct: 328 LIPVHSPFGHEPLAGCLHAHVVKAGLD--ANAPVSTALTTLYCRFNDMDSARRAFDAMPE 385

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           +  E WN MI GY QN     A+ LF Q+  L+ +  + +T  SALSA +QL  L LG+ 
Sbjct: 386 KTMESWNAMISGYAQNGLTEMAVALFQQMQALN-VRPNPLTISSALSACAQLGALSLGKW 444

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H  I    + L V V+ A+I+                    ++VVSWN MIS +  +G 
Sbjct: 445 VHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQ 504

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMES- 449
             E L L  +M        S T  ++L A S           H  L++ G   F  M S 
Sbjct: 505 GAEALKLYKDMMDAHLHPTSSTFLSVLYACS-----------HGGLVKEGTTVFRSMTSD 553

Query: 450 -----------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                       ++D+  ++G +K A ++  +          W A++  
Sbjct: 554 YGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGA 602


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 218/757 (28%), Positives = 377/757 (49%), Gaps = 84/757 (11%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N  +I F       ++  L  +       +  +++ Y++ L+ C +      GK +HC  
Sbjct: 5   NNFLIRFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRN 190
           ++       F +N LLNMY                      K D +C   K+FD M  RN
Sbjct: 65  LKRGGCLDLFAWNILLNMYV---------------------KSDFLCDASKLFDEMPERN 103

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
            +++ T++  Y ++ R++EA+  F  + R G   +   F  +   L S+   +    ++ 
Sbjct: 104 TISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHA 163

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            + KLG E  ++ FV ++ I  Y+  G  D AR++FD  L ++   W  M+  + +N+  
Sbjct: 164 CIFKLGHE--SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCF 221

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA++LF Q + +     ++ TF S   A   L+  D+G+ +H   +K+   L + V  A
Sbjct: 222 KEALKLFSQ-MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +++                    +DV+ W+ MI+ + Q+    E + + ++M++   + +
Sbjct: 281 LLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFE 469
             T  ++L A + +   ++G Q H ++++ G+H +   S  L+D+YAK G ++ +  +F 
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFA 400

Query: 470 KNDSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             +S  R+  T WN +I G+ Q G  E+A   F  MLE+ V    VT +S L AC  +  
Sbjct: 401 --ESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 458

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E G Q+H  +++   D+++ V  +LIDMY+K G I  A  VF  + +++ V++  MI G
Sbjct: 459 LEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISG 518

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y  HG+                            AC+ AGL+D+G   F  M Q++ I+P
Sbjct: 519 YSMHGL----------------------------ACANAGLLDQGQAYFTSMIQDHGIEP 550

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             EHY C+  +LGR G + +A + + E+  + +V+ +W +LLG+C +H   EL  + A+ 
Sbjct: 551 CIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVM-VWRALLGACVIHNDIELGRISAQH 609

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           +LEM+ ++     HVLLSN+YA    W+NV  VRK M+ +G++KE G SWI+  G V+ F
Sbjct: 610 VLEMEPQDK--ATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSF 667

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
              D  HP+   I  MLE L M+ + AG   I N NV
Sbjct: 668 TVGDTSHPEVRVINGMLEWLHMKTKKAG--YIPNYNV 702



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 236/486 (48%), Gaps = 55/486 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +    T+ + T+I G+  +    EAI L+ ++ +       + + ++++LK  
Sbjct: 92  ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGH--ELNPFVFTTILKLL 149

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                  +G  +H    +     + FV  +L++ YS C                   + D
Sbjct: 150 VSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVC------------------GRVD 191

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +  +VFD +  +++V+W  +V+ + + + + EA++ F  M  +G +P+  +F +VF A  
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL 251

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L  +     V+G  +K  S Y  DL+V  + + +Y + G  D AR  F+   +++   W
Sbjct: 252 GLEAFDVGKSVHGCALK--SRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPW 309

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + MI  Y Q++   EA+E+F Q+ +   ++ +  TF S L A + ++ L+LG Q+H ++I
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQA-LVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368

Query: 358 KNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGL 396
           K  +   V V NA+++                      DV  WNT+I   VQ G  ++ L
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKAL 428

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            L   M +       VT ++ L A ++L   + G Q H+  ++     +  + + LIDMY
Sbjct: 429 RLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMY 488

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN-------GLLEEAFVAFRQMLE-H 507
           AK G IK AR +F+  +   +D+ +WNAMI+GY+ +       GLL++    F  M++ H
Sbjct: 489 AKCGSIKDARLVFDLMNK--QDEVSWNAMISGYSMHGLACANAGLLDQGQAYFTSMIQDH 546

Query: 508 NVTPNV 513
            + P +
Sbjct: 547 GIEPCI 552



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 182/360 (50%), Gaps = 44/360 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +AR++FD I     V W  ++  F  N+   EA+ L+SQM+        +N+T++S
Sbjct: 188 GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP--NNFTFAS 245

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V KAC       +GK+VH   ++       +V  +LL++Y+             K  ++D
Sbjct: 246 VFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT-------------KSGDID 292

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            ++       F+ + +++V+ W+ +++ Y ++++  EAV  F  M +  + P+  +F +V
Sbjct: 293 DAR-----XAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +++      + ++  ++K+G    +D+FV+++ + +YA+ G  + +  +F     R
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLH--SDVFVSNALMDVYAKCGRMENSMXLFAESPHR 405

Query: 293 NTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           N    WNT+I G+VQ     +A+ LF+ +LE   +   +VT+ SAL A + L  L+ G Q
Sbjct: 406 NDVTPWNTVIVGHVQLGDGEKALRLFLNMLEY-RVQATEVTYSSALRACASLAALEPGLQ 464

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           +H+  +K      ++V NA+I+                    +D VSWN MIS +  +GL
Sbjct: 465 IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL 524


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 335/633 (52%), Gaps = 51/633 (8%)

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           V++   ML  G    +  +V +      +G   +A  V+G + K G+    D+FVA+S +
Sbjct: 63  VQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAG--ADMFVATSLV 120

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
             Y   G    AR++FD   ERN   W  ++ GY  N+ P   +E+FV++LE+       
Sbjct: 121 NAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SH 179

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------ 372
            T  + L+A     ++DLG+Q+H Y IK        + N++                   
Sbjct: 180 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 239

Query: 373 --ERDVVSWNTMISAFVQNGLDDE----GLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
             E++V++W TMISA  +   D+E    GL L  +M   G M +  T+T+++S      +
Sbjct: 240 IPEKNVITWTTMISACAE---DEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            ++GKQ  A+  + G      +++  + +Y + G    A ++FE+ +  D    TWNAMI
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME--DASIITWNAMI 354

Query: 486 AGYTQ-------------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           +GY Q              G   +A   FR +    + P++ T +S+L  C+ M  +E G
Sbjct: 355 SGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +Q+H  +I+     +V V ++L++MY+K G I  A   F ++P +  VT+T+MI GY QH
Sbjct: 413 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 472

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  + A+ LF  M+  G+ P+ ITFV++LSACSYAGLV+E    FD+M++EY I+P  +H
Sbjct: 473 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 532

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ DM  R+G+V +A+ F+K  G E N   IW SL+  CR HG+ ELA   A KLLE+
Sbjct: 533 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNE-AIWSSLVAGCRSHGNMELAFYAADKLLEL 591

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
             +      ++LL N+Y     W++V +VRK M++  +      SWI +   V  F + D
Sbjct: 592 KPKGIET--YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND 649

Query: 773 QEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           + HPQ+ ++Y++LE L  + +  G +  QN+ +
Sbjct: 650 RTHPQATELYQLLENLLEKAKAIGYEPYQNAEL 682



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 149/572 (26%), Positives = 260/572 (45%), Gaps = 65/572 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L  C E  +L   +AVH H  +  +    FV  SL+N Y  C ++ DA        
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDAR------- 133

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      ++FD M  RNVV W  +V+ Y    +    +  F  ML MG  PS  + 
Sbjct: 134 -----------RLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTL 182

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
                A  +  D      V+G  +K G+E +  +   +S   +YA+LG  D A + F   
Sbjct: 183 GATLNACLASCDVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRI 240

Query: 290 LERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            E+N   W TMI    ++   VE  + LF+ +L +D ++ ++ T  S +S      +L+L
Sbjct: 241 PEKNVITWTTMISACAEDEECVELGLSLFIDML-MDGVMPNEFTLTSVMSLCGTRLDLNL 299

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+Q+ A+  K      + V N+ +                    +  +++WN MIS + Q
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359

Query: 389 ---NGLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
              +  DD        + L +  ++++     D  T +++LS  S +   + G+Q HA  
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   +  + S L++MY K G I+ A + F +  +  R   TW +MI+GY+Q+G  +E
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT--RTFVTWTSMISGYSQHGQPQE 477

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTS 553
           A   F +M    V PN +T  S+L AC+  G +E  +  H F +    Y ++  V     
Sbjct: 478 AIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGC 535

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +IDM+ + G +  A +   +   E N   +++++ G   HG  E  L+ + + K   ++P
Sbjct: 536 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADKLLELKP 593

Query: 613 DAI-TFVAVLSACSYAGLVDEGLQIFDLMQQE 643
             I T++ +L+         +  ++  LM+QE
Sbjct: 594 KGIETYILLLNMYISTERWQDVARVRKLMKQE 625



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 224/499 (44%), Gaps = 80/499 (16%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR+LFD +     V W  ++ G+  N+ P   + ++ +M +   Y S  +YT  +
Sbjct: 127 GAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS--HYTLGA 184

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L AC  + ++ +GK VH + I+  +     + NSL ++Y+  L SLD+ +         
Sbjct: 185 TLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAK-LGSLDSAL--------- 234

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVN 231
                   + F  +  +NV+ W T++S   + E  VE  +  F  ML  G+ P+  +  +
Sbjct: 235 --------RAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTS 286

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V     +  D      V     K+G E   +L V +S +++Y   G  D A ++F+   +
Sbjct: 287 VMSLCGTRLDLNLGKQVQAFSFKIGCE--TNLPVKNSTMYLYLRKGETDEAMRLFEQMED 344

Query: 292 RNTEVWNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +   WN MI GY Q            +   +A+ +F + L+   +  D  TF S LS  
Sbjct: 345 ASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF-RDLKRSVMKPDLFTFSSILSVC 403

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S +  L+ G+Q+HA  IK+     V+V +A++                     R  V+W 
Sbjct: 404 SAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWT 463

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MIS + Q+G   E + L  EM+  G   + +T  +LLSA S           +A L+  
Sbjct: 464 SMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS-----------YAGLVEE 512

Query: 441 GIHFEGM-----------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
             H+  M           + Y  +IDM+ + G ++ A   F K    + ++A W++++AG
Sbjct: 513 AEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS-FIKRTGFEPNEAIWSSLVAG 571

Query: 488 YTQNGLLEEAFVAFRQMLE 506
              +G +E AF A  ++LE
Sbjct: 572 CRSHGNMELAFYAADKLLE 590



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 43/281 (15%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A +LF+ +   + + WN +I G+              +  ++
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ ++  +K+S      D +T+SS+L  C+    L  G+ +H   I+        V ++L
Sbjct: 377 ALTIFRDLKRS--VMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 434

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C    DA                   K F  M  R  V W +++S Y +  +  
Sbjct: 435 VNMYNKCGCIQDAN------------------KAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           EA++ F  M   G+RP+ I+FV++  A S  G  + A+  + ++ K   EY  +  V   
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK---EYCIEPVVDHY 533

Query: 267 SSAIFMYAELG----CFDFARKIFDNCLERNTEVWNTMIGG 303
              I M+  LG     F F ++      E N  +W++++ G
Sbjct: 534 GCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAG 571


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 215/748 (28%), Positives = 361/748 (48%), Gaps = 115/748 (15%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  YS  LK C    ++ +G  +H   I+   +   ++  +L+N Y  C         G
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW--------G 183

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
           L+             +VF  M     + WN  +   +++E+  + V  FR M    ++  
Sbjct: 184 LEKAN----------QVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAE 233

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           T + V V  A   +G   +A  ++G + + G +  +D+ + +  I MY++ G  + AR++
Sbjct: 234 TATIVRVLQACGKMGALNAAKQIHGYVFRFGLD--SDVSLCNPLISMYSKNGKLELARRV 291

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF------------ 333
           FD+   RNT  WN+MI  Y       +A  LF + LE  ++  D VT+            
Sbjct: 292 FDSMENRNTSSWNSMISSYAALGFLNDAWSLFYE-LESSDMKPDIVTWNCLLSGHFLHGY 350

Query: 334 -----------------------LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
                                   S L A+S+L  L++G++ H Y+++N     V V  +
Sbjct: 351 KEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTS 410

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I+                    R++ +WN+++S +   G+ ++ L L+ +M+K+G   D
Sbjct: 411 LIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 470

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK 470
            VT   ++S                                   YA  G  K A  +  +
Sbjct: 471 LVTWNGMISG----------------------------------YAMWGCGKEALAVLHQ 496

Query: 471 NDSGDR--DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             S     +  +W A+I+G +Q G   ++   F QM +  V PN  +I  +L AC  +  
Sbjct: 497 TKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSL 556

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++ GK++H  SIR    ++VFV T+LIDMYSKS  +  A  VF +I  K   ++  MI+G
Sbjct: 557 LQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMG 616

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           +   G+ + A+S+F  M+  G+ PDAITF A+LSAC  +GL+ EG + FD M  +Y+I P
Sbjct: 617 FAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVP 676

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             EHYCC+ D+LGR G + EA++ +  +  + +   IWG+LLGSCR+H + + AE  AK 
Sbjct: 677 RLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDA-TIWGALLGSCRIHKNLKFAETAAKN 735

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L +++  NS    ++L+ N+Y+    WE++D +R+ M   G+R     SWI +   V+ F
Sbjct: 736 LFKLEPNNS--ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVF 793

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +S ++ HP + KIY  L +L  EM+  G
Sbjct: 794 SSDEKPHPDAGKIYFELYQLVSEMKKLG 821



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 253/570 (44%), Gaps = 77/570 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F  +  P  ++WN  II  + +    + + L+ +M+ S  +   +  T   VL+AC
Sbjct: 187 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFS--FLKAETATIVRVLQAC 244

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +   L   K +H +  R   +    + N L++MYS                     K +
Sbjct: 245 GKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK------------------NGKLE 286

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF----------------------- 214
           L  +VFD+M  RN  +WN+++S Y       +A   F                       
Sbjct: 287 LARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHF 346

Query: 215 ---------RMMLRM---GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                     ++ RM   G +P++ S  +V  A+S LG        +G +++ G  +  D
Sbjct: 347 LHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNG--FDCD 404

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           ++V +S I MY +      A+ +FDN   RN   WN+++ GY       +A+ L  Q +E
Sbjct: 405 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQ-ME 463

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI--IKNFVALPVIVLNAVIERDVVSWN 380
            + I  D VT+   +S  +       G++  A +   K+    P          +VVSW 
Sbjct: 464 KEGIKPDLVTWNGMISGYAM---WGCGKEALAVLHQTKSLGLTP----------NVVSWT 510

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +IS   Q G + + L    +MQ++G M +S ++T LL A ++L     GK+ H   +R+
Sbjct: 511 ALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRN 570

Query: 441 G-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G I    + + LIDMY+KS  +K A ++F +    ++  A+WN MI G+   GL +EA  
Sbjct: 571 GFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ--NKTLASWNCMIMGFAIFGLGKEAIS 628

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMY 558
            F +M +  V P+ +T  ++L AC   G I  G K        Y +   +     ++D+ 
Sbjct: 629 VFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLL 688

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILG 588
            ++G ++ A ++   +P K   T    +LG
Sbjct: 689 GRAGYLDEAWDLIHTMPLKPDATIWGALLG 718



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 217/467 (46%), Gaps = 26/467 (5%)

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL--QELDLGQQLH-----AYII 357
           +QN    + I+     L LD    DD   +++L++V  +  Q + L Q+ +       +I
Sbjct: 14  LQNPLTHKPIKTPTSKLYLDSHSSDDSNVITSLTSVKMMHAQMIKLPQKWNPDAAAKNLI 73

Query: 358 KNFVAL-----PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY-EMQKQGFMIDS 411
            +++         +V    + R+ + WN+ +  F  +      ++ V+ E+  +G + DS
Sbjct: 74  SSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDS 133

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK 470
              +  L   + + +  +G + H  L++ G   +  +   L++ Y +   ++ A Q+F  
Sbjct: 134 EVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF-- 191

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
           ++  + +   WN  I    Q+  L++    FR+M    +     TI  VL AC  MG + 
Sbjct: 192 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALN 251

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
             KQ+HG+  R+ LD +V +   LI MYSK+G +  A  VF  +  +N+ ++ +MI  Y 
Sbjct: 252 AAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYA 311

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
             G    A SLF  ++   ++PD +T+  +LS     G  +E L I   MQ E   +P++
Sbjct: 312 ALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNS 370

Query: 651 EHYCCVADMLGRVGKV---VEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
                V   +  +G +    E + +V   G + +V    G+ L    +  HS  +   A+
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV--GTSLIDMYVKNHSLTS---AQ 425

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            + +     ++  ++ L+S  Y+ +G +E+  ++  +M + G++ ++
Sbjct: 426 AVFDNMKNRNIFAWNSLVSG-YSFKGMFEDALRLLNQMEKEGIKPDL 471


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/592 (33%), Positives = 327/592 (55%), Gaps = 42/592 (7%)

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
           +V+  ++K G+    + FV S  + +YA+ G    ARK+FDN   RN  VW T++ GYVQ
Sbjct: 1   MVHAHVIKTGTH--EEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQ 58

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
           N+ P  A+E+F  +LE       + T   AL+A S L+ + LG+Q HA+IIK  ++    
Sbjct: 59  NSQPEVAVEVFGDMLESGSFP-SNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSS 117

Query: 367 VLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           + NA+                     E+DV+SW T+ISA   NG    GL L  EM  + 
Sbjct: 118 IGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFEN 177

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTA 464
              +  T+T++LS  S +++ D+G Q H+   + G H   +   + L+ +Y K G I  A
Sbjct: 178 VEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLG-HESNLRITNSLVYLYLKCGCIDEA 236

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLE-----------EAFVAFRQMLEHNVTPNV 513
           + +F + +   ++  TWNAMIAG+ Q   L            EA   + ++      P++
Sbjct: 237 KNLFNRMEY--KNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDL 294

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            T++S+L  C+ +  +E G+Q+H  +I+     +V VGT+L+DMY K G I  A   F  
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  +  +++T+MI  + +HG S+ AL LF  M+  G  P+ ITFV VL+ACS+AG+VDE 
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEA 414

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L+ F++MQ+EYKI+P  +HY C+ DM  R+G++ EA++ +K +  E N   IW  L+  C
Sbjct: 415 LEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEF-IWLLLIAGC 473

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R HG+ EL    A++LL++  R++    +V+L N+Y     WE+V  VR+ M+E  + K 
Sbjct: 474 RNHGNEELGFYAAEQLLKLKPRSTET--YVVLLNMYISAERWEDVSMVRRLMKEEKVGKL 531

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
              S I + G V+ F + ++ H  + +++ +L  L    ++ G + ++N  V
Sbjct: 532 KDWSRISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEV 583



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 223/482 (46%), Gaps = 57/482 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD++ R   V+W T++ G+V N+ P  A+ ++  M +S  + S  N+T S  L AC
Sbjct: 34  ARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS--NFTLSIALNAC 91

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   ++ +GK  H   I+   +    + N+L ++YS    SLD+ +              
Sbjct: 92  SSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSK-FGSLDSSV-------------- 136

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K F     ++V++W TI+S      R    +R F  ML   + P+  +  +V    S
Sbjct: 137 ---KAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCS 193

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++        V+ L  KLG E  ++L + +S +++Y + GC D A+ +F+    +N   W
Sbjct: 194 TIQSSDLGMQVHSLSTKLGHE--SNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITW 251

Query: 298 NTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           N MI G+ Q                EA+ ++++ L       D  T  S L+  S+L  L
Sbjct: 252 NAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLK-LNRSGRKPDLFTLSSILTVCSRLAAL 310

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G+Q+HA  IK+     V+V  A+++                    R ++SW +MI++F
Sbjct: 311 EQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSF 370

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            ++G     L L  +M+  GF  + +T   +L+A S+    D   +    + +       
Sbjct: 371 ARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPV 430

Query: 447 MESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           M+ Y  L+DM+ + G +  A  + ++ D  + ++  W  +IAG   +G  E  F A  Q+
Sbjct: 431 MDHYGCLVDMFVRLGRLDEAFDVIKRMDV-EPNEFIWLLLIAGCRNHGNEELGFYAAEQL 489

Query: 505 LE 506
           L+
Sbjct: 490 LK 491



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 246/553 (44%), Gaps = 66/553 (11%)

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
           VH H I+  ++   FV + L+N+Y+ C   ++A                   KVFD + R
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNAR------------------KVFDNLPR 43

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           RNVV W T+++ YV+  +   AV  F  ML  G  PS  +      A SSL         
Sbjct: 44  RNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQF 103

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +  ++K      +D  + ++   +Y++ G  D + K F    E++   W T+I     N 
Sbjct: 104 HAFIIKY--RISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNG 161

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY-----------II 357
                + LF+++L  + +  +D T  S LS  S +Q  DLG Q+H+            I 
Sbjct: 162 RAGMGLRLFIEML-FENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRIT 220

Query: 358 KNFVALPVI---------VLNAVIERDVVSWNTMISAFVQNGLD------------DEGL 396
            + V L +          + N +  +++++WN MI+   Q  +D             E L
Sbjct: 221 NSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ-AMDLAKDNFSAQQTGTEAL 279

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            +  ++ + G   D  T++++L+  S L   + G+Q HA  ++ G   +  + + L+DMY
Sbjct: 280 GMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMY 339

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G I+ AR+ F   D   R   +W +MI  + ++G  + A   F  M      PN +T
Sbjct: 340 DKCGSIERARKAFL--DMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQIT 397

Query: 516 IASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
              VL AC+  G ++  + L  F I    Y +   +     L+DM+ + G ++ A +V  
Sbjct: 398 FVGVLAACSHAGMVD--EALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIK 455

Query: 573 KIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI-TFVAVLSACSYAGLV 630
           ++  E N   +  +I G   HG  E  L  + + +   ++P +  T+V +L+    A   
Sbjct: 456 RMDVEPNEFIWLLLIAGCRNHGNEE--LGFYAAEQLLKLKPRSTETYVVLLNMYISAERW 513

Query: 631 DEGLQIFDLMQQE 643
           ++   +  LM++E
Sbjct: 514 EDVSMVRRLMKEE 526


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 231/805 (28%), Positives = 398/805 (49%), Gaps = 123/805 (15%)

Query: 51   QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYTSCDNY 108
            + GR   AR + D I++P  V WN +I G+  N    E   +  Q+ +    P  S    
Sbjct: 392  KTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVS---- 447

Query: 109  TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
            T++S++  C   + L IGK++H   ++   +   F+  +L++MY+           G  +
Sbjct: 448  TFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGG---------GNLF 498

Query: 169  VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            +  D         +FD+   +NVV WN+++S Y + ++  EA + F+ ML+  ++P+ ++
Sbjct: 499  IARD---------LFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVT 549

Query: 229  FVNVFPAL-----------------------------------SSLGDYKSADVV----- 248
            FV++ P                                     + LGD  SA  +     
Sbjct: 550  FVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMP 609

Query: 249  ------------YGLL----------------VKLGSEYVNDLFVASSAIFMYAELGCFD 280
                        YG++                +K G E+ + L ++++ +  Y++ G   
Sbjct: 610  RKTSYRDSMISGYGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLS 669

Query: 281  FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             + K+F     RN   WNT+I G V N    +A+ L +  ++ +++  D VT +S +   
Sbjct: 670  SSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVAL-LHKMQQEKMELDLVTLISIIPIC 728

Query: 341  SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
               + L  G  LH Y IK   A  V ++NA+I                     R +VSWN
Sbjct: 729  RVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWN 788

Query: 381  TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
             +I+ +  + L +E +    +M  +G   + VT+  LL +   L     GK  HA+ +R 
Sbjct: 789  ALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTLLQ---GKSIHAFAVRT 845

Query: 441  GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            G+  E  + + LI MYA+   I +   +FE    G  D A WNA+++ Y Q    +E+  
Sbjct: 846  GVIVETPIITSLISMYARFENINSFIFLFEMG--GKEDIALWNAIMSVYVQTKNAKESVT 903

Query: 500  AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
             F ++L   V P+ +T  S++ AC  + ++ L   +  + I+   D+++ +  +LID+++
Sbjct: 904  FFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFA 963

Query: 560  KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
            + G I+ A  +F  +  K++V+++TMI GYG HG SE AL+L   M+  G++PD IT+ +
Sbjct: 964  RCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYAS 1023

Query: 620  VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            VLSACS+ G +D+G  IF+ M +E  +    EHY C+ D+LGR G++ EAY+FV++L  +
Sbjct: 1024 VLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCK 1082

Query: 680  GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
             +V  +  SLL +C +HG+ +L E +   L E+D +NS  G +V+L NIYA  G W + +
Sbjct: 1083 PSVSLL-ESLLXACIIHGNVKLGEKICSLLFELDPKNS--GSYVMLYNIYAAAGRWMDAN 1139

Query: 740  KVRKEMRERGLRKEVGCSWIDVGGY 764
            +VR +M ER LRK  G S ++   Y
Sbjct: 1140 RVRSDMEERQLRKIPGFSLVEGNRY 1164



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/576 (24%), Positives = 274/576 (47%), Gaps = 43/576 (7%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P LA   F++I +P+  + N ++I  +C++  +E +L    +K        D++T+  
Sbjct: 293 GAPELALSAFEAIEKPSVFLQN-LMIRRLCDHGLFEDVLCV-YLKCRVLGCPSDDFTFPF 350

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+KAC+    + I + VHC  +R     +  +  +L++ Y+     + A +         
Sbjct: 351 VIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARL--------- 401

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    V D + + ++V WN ++S Y       E     R +L MG++P+  +F ++
Sbjct: 402 ---------VLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASI 452

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            P  + +        ++G +VK G  + +D F+  + I MYA  G    AR +FD+  E+
Sbjct: 453 IPLCTRMKCLDIGKSIHGFVVKSG--FSSDEFLTPALISMYAGGGNLFIARDLFDSAAEK 510

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +WN+MI  Y QN    EA ++F Q+L+ + +  + VTF+S +           G+ L
Sbjct: 511 NVVIWNSMISAYAQNQKSSEAFKMFQQMLKAN-MQPNVVTFVSIIPCCENSANFWXGKSL 569

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS- 411
           HA+++K  +   + V  A           ++S + + G  +    + Y+M ++    DS 
Sbjct: 570 HAHVMKYRLDSQLSVATA-----------LLSMYAKLGDXNSAXFIFYQMPRKTSYRDSM 618

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIF 468
           ++   ++S     R     +      ++ G  F+    + + L+  Y+  G + ++ ++F
Sbjct: 619 ISGYGIMSMG---RPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLF 675

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +K     R+  +WN +I+G   NG  ++A     +M +  +  ++VT+ S++P C    N
Sbjct: 676 QKMPL--RNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXEN 733

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +  G  LHG++I+     +V +  +LI MY   G IN    +F  +P ++ V++  +I G
Sbjct: 734 LIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITG 793

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           Y  H +    ++ F  M   G +P+ +T + +L +C
Sbjct: 794 YRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSC 829



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 188/394 (47%), Gaps = 34/394 (8%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   SF+ +F    ++ + K    V  L+V+   + + D +V +  I     LG  + A 
Sbjct: 245 PKVTSFLRLFDLCRNIENLKPLGSV--LIVR---DLMRDEYVVAEFIISCFHLGAPELAL 299

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNN--HPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             F+   + +  + N MI     +     V  + L  +VL       DD TF   + A S
Sbjct: 300 SAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPS---DDFTFPFVIKACS 356

Query: 342 QLQELDLGQQLHAYIIK-----NFVALPVIV---------------LNAVIERDVVSWNT 381
            L  + + + +H  +++     N V    +V               L+ + + D+V+WN 
Sbjct: 357 ALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNA 416

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +IS +  NG D E   ++ ++ + G   +  T  +++   + ++  D+GK  H ++++ G
Sbjct: 417 LISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSG 476

Query: 442 IHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
               E +   LI MYA  G +  AR +F+   + +++   WN+MI+ Y QN    EAF  
Sbjct: 477 FSSDEFLTPALISMYAGGGNLFIARDLFD--SAAEKNVVIWNSMISAYAQNQKSSEAFKM 534

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F+QML+ N+ PNVVT  S++P C    N   GK LH   ++Y LD  + V T+L+ MY+K
Sbjct: 535 FQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAK 594

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
            G  N A  +F ++P K S    +MI GYG   M
Sbjct: 595 LGDXNSAXFIFYQMPRKTSYR-DSMISGYGIMSM 627



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 77/155 (49%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N MI     +GL E+    + +        +  T   V+ AC+ +G + + + +H   +R
Sbjct: 314 NLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLR 373

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
              ++N+ + T+L+D Y+K+G +  A  V  KI + + VT+  +I GY  +G  +    +
Sbjct: 374 TAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 433

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            R +   G++P+  TF +++  C+    +D G  I
Sbjct: 434 LRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSI 468



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 19/217 (8%)

Query: 506 EHNVT-PNVVTIASVLPACNPMGNIE-LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           +HN + P V +   +   C  + N++ LG  L    +R L+     V   +I  +   G 
Sbjct: 239 KHNSSNPKVTSFLRLFDLCRNIENLKPLGSVL---IVRDLMRDEYVVAEFIISCF-HLGA 294

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
              A + F  I + +      MI     HG+ E  L ++   +  G   D  TF  V+ A
Sbjct: 295 PELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKA 354

Query: 624 CSYAGLV--DEGLQIFDL---MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           CS  G V   EG+    L    ++   IQ +      + D   + G++V+A   + ++ +
Sbjct: 355 CSALGAVWIAEGVHCIVLRTAFEENLVIQTA------LVDFYAKTGRMVKARLVLDKISQ 408

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
               L  W +L+    L+G  +    V +++LEM  +
Sbjct: 409 PD--LVTWNALISGYSLNGFDKEVFEVLRQILEMGLK 443


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 227/774 (29%), Positives = 384/774 (49%), Gaps = 59/774 (7%)

Query: 58  ARQLFDSITRPTT-------VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           A Q+FD  ++  +        +WN++I G+       E +  + +M         D ++ 
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG--VRPDAFSL 171

Query: 111 SSVLKACAETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           S V+    +  N R   GK +H   +R   +   F+  +L++MY     S+DA  V   +
Sbjct: 172 SIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRV---F 228

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
           VE++               + NVV WN ++  +  +     ++  + +     ++  + S
Sbjct: 229 VEIE--------------DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F     A S   +      ++  +VK+G    ND +V +S + MY++ G    A  +F  
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLH--NDPYVCTSLLSMYSKCGMVGEAETVFSC 332

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            +++  E+WN M+  Y +N++   A++LF   +    ++ D  T  + +S  S L   + 
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLF-GFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391

Query: 349 GQQLHAYIIKNFV--------AL------------PVIVLNAVIERDVVSWNTMISAFVQ 388
           G+ +HA + K  +        AL              +V  ++ E+D+V+W ++IS   +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451

Query: 389 NGLDDEGLMLVYEMQKQ--GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
           NG   E L +  +M+        DS  +T++ +A + L     G Q H  +++ G+    
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + S LID+Y+K GL + A ++F    +   +   WN+MI+ Y++N L E +   F  ML
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMST--ENMVAWNSMISCYSRNNLPELSIDLFNLML 569

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              + P+ V+I SVL A +   ++  GK LHG+++R  +  +  +  +LIDMY K G   
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           YA N+F K+  K+ +T+  MI GYG HG    ALSLF  MK  G  PD +TF++++SAC+
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           ++G V+EG  IF+ M+Q+Y I+P+ EHY  + D+LGR G + EAY F+K +  E +   I
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS-SI 748

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W  LL + R H + EL  + A+KLL M+        +V L N+Y E G      K+   M
Sbjct: 749 WLCLLSASRTHHNVELGILSAEKLLRMEPERGST--YVQLINLYMEAGLKNEAAKLLGLM 806

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
           +E+GL K+ GCSWI+V    N F S     P   +I+ +L RL   M +    T
Sbjct: 807 KEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDEDKAT 860



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 288/599 (48%), Gaps = 48/599 (8%)

Query: 56  HLARQLF---DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           H+ R L    DS   P ++  N+ I   +      +A+ LYS+   SSP+ +   +T+ S
Sbjct: 9   HIRRGLCCVADSYISPASI--NSGIRALIQKGEYLQALHLYSKHDGSSPFWT-SVFTFPS 65

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKAC+   NL  GK +H   +        F+  SL+NMY  C            +++  
Sbjct: 66  LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKC-----------GFLDYA 114

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              +D   +    +  R+V  WN+++  Y K  R+ E V  FR ML  G+RP   S   V
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174

Query: 233 FPALSSLGDYK--SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
              +   G+++      ++G +++  +    D F+ ++ I MY + G    A ++F    
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLR--NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE 232

Query: 291 ER-NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           ++ N  +WN MI G+  +     +++L++ + + + +     +F  AL A SQ +    G
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFG 291

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
           +Q+H  ++K                      V     V + V+++ +  WN M++A+ +N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
                 L L   M+++  + DS T++ ++S  S L   + GK  HA L +  I     +E
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L+ +Y+K G    A  +F+  +  ++D   W ++I+G  +NG  +EA   F  M + +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSME--EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469

Query: 509 --VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+   + SV  AC  +  +  G Q+HG  I+  L  NVFVG+SLID+YSK G+   
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           A  VF  +  +N V + +MI  Y ++ + E ++ LF  M   GI PD+++  +VL A S
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 244/563 (43%), Gaps = 94/563 (16%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + G    A  +F  +      IWN ++  +  N+  Y A+ L+  M++ S   
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D++T S+V+  C+       GK+VH    +     +  + ++LL +YS C    DA +
Sbjct: 372 --DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMG 221
                             VF +M  +++VAW +++S   K  ++ EA++ F  M      
Sbjct: 430 ------------------VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++P +    +V  A + L   +    V+G ++K G   V ++FV SS I +Y++ G  + 
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG--LVLNVFVGSSLIDLYSKCGLPEM 529

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF-DDVTFLSALSAV 340
           A K+F +    N   WN+MI  Y +NN P  +I+LF   L L + +F D V+  S L A+
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF--NLMLSQGIFPDSVSITSVLVAI 587

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S    L  G+ LH Y ++  +     + NA+I+                    + +++WN
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            MI  +  +G     L L  EM+K G   D VT  +L+SA ++                 
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH----------------- 690

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFE--KNDSG-DRDQATWNAMIAGYTQNGLLEEA 497
                            SG ++  + IFE  K D G + +   +  M+    + GLLEEA
Sbjct: 691 -----------------SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS---L 554
           +   + M    +  +      +L A     N+ELG      S   LL      G++   L
Sbjct: 734 YSFIKAM---PIEADSSIWLCLLSASRTHHNVELGI----LSAEKLLRMEPERGSTYVQL 786

Query: 555 IDMYSKSGVINYAANVFAKIPEK 577
           I++Y ++G+ N AA +   + EK
Sbjct: 787 INLYMEAGLKNEAAKLLGLMKEK 809



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +V T  S+L AC+ + N+  GK +HG  +      + F+ TSL++MY K G ++YA  VF
Sbjct: 59  SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118

Query: 572 -------AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                  + +  ++   + +MI GY +    +  +  FR M   G+ PDA +   V+S  
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178

Query: 625 SYAGLV--DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
              G    +EG QI   M +   +   +     + DM  + G  ++A+    E+ ++ NV
Sbjct: 179 CKEGNFRREEGKQIHGFMLRN-SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237

Query: 683 LEIWGSLL 690
           + +W  ++
Sbjct: 238 V-LWNVMI 244


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 204/646 (31%), Positives = 339/646 (52%), Gaps = 63/646 (9%)

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +T    +A +   ++++    P T  + N+  A S LG+   A  V+  + +  S   N 
Sbjct: 17  ETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNT 76

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +  A      Y++ G     ++IF     R+   WN++I GYV     VEA++ +  +++
Sbjct: 77  MLSA------YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMK 130

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVA 362
              +  + +TF + L  VS    +DLG+Q+H  I+K                      V+
Sbjct: 131 DGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVS 190

Query: 363 LP-----------VIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +            V++ N +I                    ERD +SW TMI+  +QNGL
Sbjct: 191 VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
           + E + L  +M+++G  +D  T  ++L+A   LR    GK+ H  ++R G  H   + S 
Sbjct: 251 EAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMY K   ++ A  +F++    +++  +W AM+ GY QNG  EEA   F  M  + + 
Sbjct: 311 LVDMYCKCRSVRYAEAVFKR--MANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE 368

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+  T+ SV+ +C  + ++E G Q H  ++   L   + V  +LI +Y K G I  +  +
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQL 428

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F ++  ++ V++T ++ GY Q G +   + LF  M   G++PDA+TF+AVLSACS AGLV
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           + G Q F+ M +++ I P ++HY C+ D+ GR G++ EA  F+ ++    + +  W +LL
Sbjct: 489 ERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIG-WATLL 547

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            SCRL+G+ E+ +  A+ LLE+D +N  P  ++LLS+IYA +G W NV ++R+ MRE+G 
Sbjct: 548 SSCRLYGNEEIGKWAAESLLELDPQN--PAGYILLSSIYAAKGKWSNVAQLRRGMREKGA 605

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           RKE G SWI     V  F++ DQ  P S +IY  LE+L  +M   G
Sbjct: 606 RKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEG 651



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/535 (23%), Positives = 232/535 (43%), Gaps = 75/535 (14%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +  + LS   + G     +++F  +     V WN++I G+VC     EA+  Y
Sbjct: 66  MPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTY 125

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           + M K     + +  T+S++L   +    + +G+ +H   ++       FV +SL++MY+
Sbjct: 126 NSMMKDG-VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYA 184

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSW 200
                  A  V  +  E +   Y+ +              ++F  M+ R+ ++W T+++ 
Sbjct: 185 KMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITG 244

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
            ++     EA+  FR M + G+     +F +V  A   L   K    ++ L+++ G  Y 
Sbjct: 245 LIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG--YN 302

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +++FV S+ + MY +     +A  +F     +N   W  M+ GY QN    EA+ +F   
Sbjct: 303 HNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCD- 361

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           ++ + I  DD T  S +S+ + L  L+ G Q H   + + +   + V NA+I        
Sbjct: 362 MQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGS 421

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        RD VSW  ++S + Q G  +E + L   M  QG   D+VT  A+LSA
Sbjct: 422 IEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSA 481

Query: 421 ASNLRNQDVGKQTHAYLLR-HG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
            S     + G+Q    +L+ HG I F    + +ID++ ++G ++ A+    K        
Sbjct: 482 CSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINK-------- 533

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                                          +P+ +  A++L +C   GN E+GK
Sbjct: 534 ----------------------------MPFSPDSIGWATLLSSCRLYGNEEIGK 560


>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 193/602 (32%), Positives = 317/602 (52%), Gaps = 75/602 (12%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           FV +  + MY   GC D A  +F    +RN   W  ++  +V + +  EA+ LF + L+L
Sbjct: 95  FVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLF-EKLQL 153

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-------------NFVALPVIVLNA 370
           D+I  +   F   L     L+ L+LG+QLH  +IK              F    V+  N 
Sbjct: 154 DDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNT 213

Query: 371 VI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGF 407
           +I                       +D +SWN+MIS +  N L DE L +  ++  ++G 
Sbjct: 214 MIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGI 273

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
             DS T+ ++L+A +++ +   GK+ HA  +  G+H+   +   L++MY+K   +K A+ 
Sbjct: 274 EADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQL 333

Query: 467 IFE---------------------------------KNDSGDRDQATWNAMIAGYTQNGL 493
            F+                                 K D  + +  TWN +I+G+ +NG 
Sbjct: 334 AFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGH 393

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            E A   F +M   ++ P++ T+  +LPAC  +  I  GKQ+H  SIR   + +V +G +
Sbjct: 394 NELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAA 453

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L+DMY+K G I +A  V+ +I   N V+   M+  Y  HG  +  ++LFR+M G G  PD
Sbjct: 454 LVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPD 513

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            +TF++VLS+C +AG V+ G + FDLM   Y + PS +HY C+ D+L R G++ EAYE V
Sbjct: 514 HVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSRAGRLDEAYELV 572

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
           K++  + + + +WG+LLG C + G+ EL E+ A+ L+E++  N+  G +VLL+N+YA  G
Sbjct: 573 KKIPRKPDSV-MWGALLGGCVIWGNVELGEIAAESLIELEPNNT--GNYVLLANLYAYAG 629

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W ++D+ R+ +++RG+ K  GCSWI+    ++ F S D+ H ++  IY  L+ L   MR
Sbjct: 630 RWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMR 689

Query: 794 NA 795
             
Sbjct: 690 TG 691



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 242/555 (43%), Gaps = 97/555 (17%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEM 163
           D+ TY+S+L++C   R L +GK VH H ++   +   FV   LL MY    CL   DA +
Sbjct: 61  DSSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLD--DANL 115

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF  M +RN+ +W  I+S +V    + EA+  F  +    I 
Sbjct: 116 ------------------VFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIG 157

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVK----LGSEY-------VNDLFVASSAIFM 272
                F  V      L   +    ++G+++K    +GS         V ++   ++ I  
Sbjct: 158 LEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVG 217

Query: 273 YAELGCFDFARKIFDN--CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
           Y E G  + A+++FD    + ++T  WN+MI GY  N    EA+ +F  +L  + I  D 
Sbjct: 218 YCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADS 277

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYII------KNFVALPVI--------------VLNA 370
            T  S L+A + +  L  G+++HA  +        FV   ++                + 
Sbjct: 278 FTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDG 337

Query: 371 VIERDVVSWNTMISAF-----------------------------------VQNGLDDEG 395
           V ERD  +WN +IS +                                   V+NG ++  
Sbjct: 338 VTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELA 397

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L  EMQ      D  TV  +L A + L     GKQ HA+ +R G   +  + + L+DM
Sbjct: 398 LRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDM 457

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G IK A Q++  N   + +  + NAM+  Y  +G  +E    FR ML +   P+ V
Sbjct: 458 YAKCGSIKHAMQVY--NRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHV 515

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  SVL +C   G +E G +       Y +  ++   T ++D+ S++G ++ A  +  KI
Sbjct: 516 TFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKI 575

Query: 575 PEK-NSVTYTTMILG 588
           P K +SV +  ++ G
Sbjct: 576 PRKPDSVMWGALLGG 590



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 23/322 (7%)

Query: 50  CQEGRPHLARQLFDS--ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           C+ G    A++LFD   +    T+ WN++I G+  N L  EA+ ++  +       + D+
Sbjct: 219 CENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEA-DS 277

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +T  SVL ACA+  +LR GK VH   +    + + FV  +L+ MYS C     A++    
Sbjct: 278 FTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDG 337

Query: 168 YVEVDYSKYDLV------CKVFDTMRRR-----------NVVAWNTIVSWYVKTERYVEA 210
             E D + ++++      C   + ++             NV  WN I+S +V+      A
Sbjct: 338 VTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELA 397

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           +R F  M    +RP   +   + PA + L        V+   ++ G E   D+ + ++ +
Sbjct: 398 LRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL--DVHIGAALV 455

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MYA+ G    A ++++     N    N M+  Y  + H  E I LF  +L  +    D 
Sbjct: 456 DMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLG-NGFRPDH 514

Query: 331 VTFLSALSAVSQLQELDLGQQL 352
           VTFLS LS+      ++ G + 
Sbjct: 515 VTFLSVLSSCVHAGAVETGHEF 536



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 10/132 (7%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T AS+L +C  +    LGKQ+H  +++     + FV T L+ MY + G ++ A  VF K+
Sbjct: 64  TYASLLESCRTL---NLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P++N  ++T ++  +  HG  E ALSLF  ++   I  +   F  VL  C        GL
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCG-------GL 173

Query: 635 QIFDLMQQEYKI 646
           ++ +L +Q + +
Sbjct: 174 RVLELGRQLHGV 185


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 203/640 (31%), Positives = 335/640 (52%), Gaps = 34/640 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  +   N V+W  IV+ + +   Y EA+  +R M+  G+RP    FV      SS  D
Sbjct: 14  VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKD 73

Query: 242 YKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            K   +++ ++  L ++ +  D+ + ++ I MYA     + ARK FD   ++    WN +
Sbjct: 74  LKQGQLLHAMI--LETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNAL 131

Query: 301 IGGYVQNNHPVEAIELFVQVLEL--DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           I GY +N     A++++  ++    + +  D +TF SAL A S + ++  G+++ A  + 
Sbjct: 132 IAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVA 191

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  A   IV NA+I                     RDV++WNTMIS + + G   + L L
Sbjct: 192 SGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALEL 251

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M       + VT   LL+A +NL + + G+  H  +  HG   +  + + L++MY K
Sbjct: 252 FQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTK 311

Query: 458 -SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            S  ++ ARQ+FE+  +  RD  TWN +I  Y Q G  ++A   F+QM   NV PN +T+
Sbjct: 312 CSSSLEEARQVFERLRT--RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ++VL AC  +G    GK +H          +V +  SL++MY++ G ++    VFA I +
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V+++T+I  Y QHG S   L  F  +   G+  D +T V+ LSACS+ G++ EG+Q 
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQS 489

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  ++ + P   H+ C+ D+L R G++  A   + ++    + +  W SLL  C+LH
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA-WTSLLSGCKLH 548

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             ++ A  VA KL E+++ +       LLSN+YAE G W   D VRK    R  RK  GC
Sbjct: 549 NDTKRAARVADKLFELESEDEHSTV-TLLSNVYAEAGRW---DDVRKTRNRRAARKNPGC 604

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S+I++   V+ F + D+ HP+   I   ++RL+ +M++AG
Sbjct: 605 SYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/579 (24%), Positives = 269/579 (46%), Gaps = 73/579 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLK 115
           A  +F +I  P +V W  I+  F  N    EA+  Y +M  +   P    D   +   + 
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP----DGAMFVVAIG 66

Query: 116 ACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            C+ +++L+ G+ +H   +          +  +L+ MY+ C                   
Sbjct: 67  VCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARC------------------R 108

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM---GIRPSTISFVN 231
             +L  K FD M ++ +V WN +++ Y +   +  A++ ++ M+     G++P  I+F +
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A S +GD      +    V  G  Y +D  V ++ I MY++ G  + ARK+FD    
Sbjct: 169 ALYACSVVGDISQGREIEARTVASG--YASDSIVQNALINMYSKCGSLESARKVFDRLKN 226

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   WNTMI GY +     +A+ELF Q +  ++   + VTF+  L+A + L++L+ G+ 
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELF-QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 352 LHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNG 390
           +H  + ++     +++ N ++                      RDV++WN +I A+VQ G
Sbjct: 286 IHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYG 345

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              + L +  +MQ +    + +T++ +LSA + L  +  GK  HA +       +  +E+
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN 405

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L++MY + G +     +F      D+   +W+ +IA Y Q+G        F ++L+  +
Sbjct: 406 SLMNMYNRCGSLDDTVGVFAA--IRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463

Query: 510 TPNVVTIASVLPACNPMGNIELGKQL-------HGFS--IRYLLDQNVFVGTSLIDMYSK 560
             + VT+ S L AC+  G ++ G Q        HG +   R+ L         ++D+ S+
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFL--------CMVDLLSR 515

Query: 561 SGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
           +G +  A N+   +P   ++V +T+++ G   H  ++RA
Sbjct: 516 AGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 228/455 (50%), Gaps = 34/455 (7%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + G    A  +F      N+  W  ++  + +N H  EA+  + +++ L+ +  D  
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMV-LEGLRPDGA 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLNAVI------------------ 372
            F+ A+   S  ++L  GQ LHA I++   +   +I+  A+I                  
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYE----MQKQGFMIDSVTVTALLSAASNLRN 426
             ++ +V+WN +I+ + +NG D  G + +Y+       +G   D++T ++ L A S + +
Sbjct: 120 MGKKTLVTWNALIAGYSRNG-DHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178

Query: 427 QDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
              G++  A  +  G   + + ++ LI+MY+K G +++AR++F++    +RD   WN MI
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLK--NRDVIAWNTMI 236

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +GY + G   +A   F++M  ++  PNVVT   +L AC  + ++E G+ +H     +  +
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYE 296

Query: 546 QNVFVGTSLIDMYSK-SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
            ++ +G  L++MY+K S  +  A  VF ++  ++ +T+  +I+ Y Q+G ++ AL +F+ 
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M+   + P+ IT   VLSAC+  G   +G  +  L+    + +        + +M  R G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCG 415

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
            + +       + ++   L  W +L+ +   HGHS
Sbjct: 416 SLDDTVGVFAAIRDKS--LVSWSTLIAAYAQHGHS 448



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 219/459 (47%), Gaps = 54/459 (11%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPY-TSCDNYTYSSVLK 115
           LAR+ FD + + T V WN +I G+  N     A+ +Y  M   SP     D  T+SS L 
Sbjct: 112 LARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALY 171

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC+   ++  G+ +    +         V N+L+NMYS C S   A              
Sbjct: 172 ACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESAR------------- 218

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFD ++ R+V+AWNT++S Y K     +A+  F+ M     +P+ ++F+ +  A
Sbjct: 219 -----KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTA 273

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLERNT 294
            ++L D +    ++  + + G  Y +DL + +  + MY +     + AR++F+    R+ 
Sbjct: 274 CTNLEDLEQGRAIHRKVKEHG--YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDV 331

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I  YVQ     +A+++F Q ++L+ +  +++T  + LSA + L     G+ +HA
Sbjct: 332 ITWNILIVAYVQYGQAKDALDIFKQ-MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390

Query: 355 YIIKNFVALPVIVLN--------------------AVIERDVVSWNTMISAFVQNGLDDE 394
            I        V++ N                    A+ ++ +VSW+T+I+A+ Q+G    
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRT 450

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI-----HFEGME 448
           GL   +E+ ++G   D VT+ + LSA S+      G Q+   ++  HG+     HF  M 
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM- 509

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
              +D+ +++G ++ A  +   +     D   W ++++G
Sbjct: 510 ---VDLLSRAGRLEAAENLIH-DMPFLPDAVAWTSLLSG 544



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 2/174 (1%)

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY K G +  A  VF  I   NSV++T ++  + ++G    AL  +R M   G+ PD   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           FV  +  CS +  + +G  +  ++ +   ++        +  M  R   +  A +   E+
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           G++   L  W +L+     +G    A  + + ++        P      S +YA
Sbjct: 121 GKK--TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYA 172


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 211/627 (33%), Positives = 347/627 (55%), Gaps = 57/627 (9%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F++    NV  + +++ +Y   + + + V  +  M   G+RP       V+P L     
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAF----VYPIL----- 106

Query: 242 YKSADV----VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTE 295
            KSA       +  ++KLG  + +D FV ++ I MYA LG    ARK+FD     ER   
Sbjct: 107 IKSAGTGGIGFHAHVLKLG--HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVA 164

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN M+ GY +     +A  LF  + E + I     T+ + ++  +++++L+  ++    
Sbjct: 165 DWNAMVSGYWKWESEGQAQWLFDVMPERNVI-----TWTAMVTGYAKVKDLEAARRY--- 216

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
               F  +P        ER VVSWN M+S + QNGL +E L L  EM   G   D  T  
Sbjct: 217 ----FDCMP--------ERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWV 264

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSG 474
            ++SA S+  +  +       L +  I     + + L+DMYAK G + +AR++F  N   
Sbjct: 265 TVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLF--NTMP 322

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGK 533
            R+  TWN+MIAGY QNG    A   F++M+    +TP+ VT+ SV+ AC  +G +ELG 
Sbjct: 323 GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGN 382

Query: 534 QLHGFSIRYLLDQNVFVGTS----LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
               + +R+L +  + +  S    +I MYS+ G +  A  VF ++  ++ V+Y T+I G+
Sbjct: 383 ----WVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGF 438

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
             HG    A++L  +MK  GIEPD +TF+ VL+ACS+AGL++EG ++F+ ++      P+
Sbjct: 439 AAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPA 493

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ D+LGRVG++ +A   ++ +  E +   ++GSLL + R+H   EL E+ A KL
Sbjct: 494 IDHYACMVDLLGRVGELEDAKRTMERMPMEPHA-GVYGSLLNASRIHKQVELGELAANKL 552

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            E++  NS  G  +LLSNIYA  G W++V+++R+ M++ G++K  G SW++ GG +++F 
Sbjct: 553 FELEPDNS--GNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFI 610

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
             D+ H +S  IY++L  L  +MR AG
Sbjct: 611 VADRSHERSDDIYQLLIELRKKMREAG 637



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 212/491 (43%), Gaps = 96/491 (19%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           PH    LF+S   P   ++ +++  +       + +L+Y QM+        D + Y  ++
Sbjct: 50  PHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCG--VRPDAFVYPILI 107

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM-------------------YSTC 155
           K+         G   H H ++       FV N++++M                   Y   
Sbjct: 108 KSAGTG-----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERK 162

Query: 156 LSSLDAEMVGLKYVEVD------------------------YSK---YDLVCKVFDTMRR 188
           ++  +A + G    E +                        Y+K    +   + FD M  
Sbjct: 163 VADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE 222

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+VV+WN ++S Y +     EA+R F  M+  GI P   ++V V  A SS GD     + 
Sbjct: 223 RSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD---PCLA 279

Query: 249 YGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
             L+  L  + +  + FV ++ + MYA+ G  D ARK+F+    RN   WN+MI GY QN
Sbjct: 280 ASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQN 339

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                AIELF +++   ++  D+VT +S +SA   L  L+LG  +  ++ +N + L +  
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            NA+I                     RDVVS+NT+IS F  +G   E + L+  M++ G 
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 459

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYA-------KSG 459
             D VT   +L+A S           HA LL  G   FE ++   ID YA       + G
Sbjct: 460 EPDRVTFIGVLTACS-----------HAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVG 508

Query: 460 LIKTARQIFEK 470
            ++ A++  E+
Sbjct: 509 ELEDAKRTMER 519


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 347/689 (50%), Gaps = 79/689 (11%)

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           L+  KA+  H      + +  V+N++    S    S +A + G     +  SK++L   +
Sbjct: 50  LKWNKAISTHMRNGHCDSALHVFNTMPRRSSV---SYNAMISGY----LRNSKFNLARNL 102

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD M  R++ +WN +++ YV+  R  +A R F +M      P                  
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLM------PE----------------- 139

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                              D+   +S +  YA+ G  D AR++FDN  E+N+  WN ++ 
Sbjct: 140 ------------------KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLA 181

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFD-------------DVTFLSALSAVSQLQELDLG 349
            YV N    EA  LF    + D I ++             D  +L     +     +   
Sbjct: 182 AYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL--FDKMPVRDAISWN 239

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
             +  Y     ++    + +    RDV +W  M+S +VQNG+ DE      EM ++    
Sbjct: 240 TMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK---- 295

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
           + V+  A+++     +  D+ ++     L   +    + S+  +I  Y + G I  AR+ 
Sbjct: 296 NEVSYNAMIAGYVQTKKMDIARE-----LFESMPCRNISSWNTMITGYGQIGDIAQARKF 350

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+      RD  +W A+IAGY Q+G  EEA   F ++ +   + N  T    L  C  + 
Sbjct: 351 FDMMPQ--RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            +ELGKQ+HG +++       FVG +L+ MY K G I+ A + F  I EK+ V++ TM+ 
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GY +HG   +AL++F SMK  G++PD IT V VLSACS+ GL+D G + F  M ++Y + 
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVI 528

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P+++HY C+ D+LGR G++ EA + ++ +  +      WG+LLG+ R+HG++EL E  A+
Sbjct: 529 PTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAAS-WGALLGASRIHGNTELGEKAAE 587

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            + +M+ +NS  G +VLLSN+YA  G W + DK+R +MR+ G++K  G SW++V   ++ 
Sbjct: 588 MVFKMEPQNS--GMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHT 645

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           F+  D  HP+  +IY  LE L ++MR  G
Sbjct: 646 FSVGDCSHPEKERIYAYLEELDLKMREEG 674



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 137/589 (23%), Positives = 238/589 (40%), Gaps = 112/589 (19%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +  + +S   +  + +LAR LFD +       WN ++ G+V N    +A  L+
Sbjct: 75  MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN---PSRFVYNSLLN 150
             M +       D  +++S+L   A+   +   + V       F N    +   +N LL 
Sbjct: 135 DLMPEK------DVVSWNSLLSGYAQNGYVDEAREV-------FDNMPEKNSISWNGLLA 181

Query: 151 MY-------STCL---SSLDAEMVGLKYVE---VDYSKYDLVCKVFDTMRRRNVVAWNTI 197
            Y         CL   S  D +++    +    V   K      +FD M  R+ ++WNT+
Sbjct: 182 AYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTM 241

Query: 198 VSWYVKTERYVEAVRQF---------------RMMLRMGIRPSTISFVNVFPALSSLGDY 242
           +S Y +     +A R F                  ++ G+     +F +  P  + +  Y
Sbjct: 242 ISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-SY 300

Query: 243 KSADVVYGLLVKLGSEYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCLERN 293
            +  ++ G +     +   +LF +         ++ I  Y ++G    ARK FD   +R+
Sbjct: 301 NA--MIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRD 358

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W  +I GY Q+ H  EA+ +FV++ + D    +  TF  ALS  + +  L+LG+Q+H
Sbjct: 359 CVSWAAIIAGYAQSGHYEEALNMFVEIKQ-DGESLNRATFGCALSTCADIAALELGKQIH 417

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
              +K        V NA++                    E+DVVSWNTM++ + ++G   
Sbjct: 418 GQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGR 477

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           + L +   M+  G   D +T+  +LSA S           H  LL  G        Y   
Sbjct: 478 QALTVFESMKTAGVKPDEITMVGVLSACS-----------HTGLLDRGT------EYFYS 520

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           M    G+I T++               +  MI    + G LEEA    R M      P  
Sbjct: 521 MTKDYGVIPTSKH--------------YTCMIDLLGRAGRLEEAQDLIRNM---PFQPGA 563

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            +  ++L A    GN ELG++      + +  QN  +   L ++Y+ SG
Sbjct: 564 ASWGALLGASRIHGNTELGEKAAEMVFK-MEPQNSGMYVLLSNLYAASG 611



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 210/466 (45%), Gaps = 45/466 (9%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+   + AI  +   G  D A  +F+    R++  +N MI GY++N+    A  LF Q+ 
Sbjct: 48  DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107

Query: 322 ELDEIVFD--------DVTFLSALSAVSQLQELDL---GQQLHAYIIKNFVALPVIVLNA 370
           E D   ++        +     A      + E D+      L  Y    +V     V + 
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           + E++ +SWN +++A+V NG  +E  +L +E +      D ++   L+     +R + +G
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLL-FESKSD---WDLISWNCLMGGF--VRKKKLG 221

Query: 431 KQTHAY---LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                +    +R  I +  M    I  YA+ G +  AR++F+  +S  RD  TW AM++G
Sbjct: 222 DARWLFDKMPVRDAISWNTM----ISGYAQGGGLSQARRLFD--ESPTRDVFTWTAMVSG 275

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           Y QNG+L+EA   F +M E N       IA  +        +++ ++L       +  +N
Sbjct: 276 YVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT----KKMDIAREL----FESMPCRN 327

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           +    ++I  Y + G I  A   F  +P+++ V++  +I GY Q G  E AL++F  +K 
Sbjct: 328 ISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD----MLGRV 663
            G   +  TF   LS C+    ++ G QI     Q  K+   T   C V +    M  + 
Sbjct: 388 DGESLNRATFGCALSTCADIAALELGKQIHG---QAVKMGYGTG--CFVGNALLAMYFKC 442

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
           G + EA +  + + EE +V+  W ++L     HG    A  V + +
Sbjct: 443 GSIDEANDTFEGI-EEKDVVS-WNTMLAGYARHGFGRQALTVFESM 486



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/402 (22%), Positives = 180/402 (44%), Gaps = 60/402 (14%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA---------A 421
           V + D++ WN  IS  ++NG  D  L +   M ++     SV+  A++S          A
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNLA 99

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
            NL +Q   +   ++            + ++  Y ++  +  AR++F+     ++D  +W
Sbjct: 100 RNLFDQMPERDLFSW------------NVMLTGYVRNCRLGDARRLFDLMP--EKDVVSW 145

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N++++GY QNG ++EA   F  M E     N ++   +L A    G IE    L  F  +
Sbjct: 146 NSLLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLL--FESK 199

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
              D ++     L+  + +   +  A  +F K+P ++++++ TMI GY Q G   +A  L
Sbjct: 200 S--DWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRL 257

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F          D  T+ A++S     G++DE    FD M ++ ++  +       A + G
Sbjct: 258 FDESP----TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYN-------AMIAG 306

Query: 662 RVGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRLHGHSELAEVV-AKKLLEMDTRNSM 718
            V    +  +  +EL E      I  W ++     + G+ ++ ++  A+K  +M  +   
Sbjct: 307 YV--QTKKMDIARELFESMPCRNISSWNTM-----ITGYGQIGDIAQARKFFDMMPQRDC 359

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGL---RKEVGCS 757
             +  +++  YA+ G++E    +  E+++ G    R   GC+
Sbjct: 360 VSWAAIIAG-YAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  + ++   Q G    AR+ FD + +   V W  II G+  +    EA
Sbjct: 319 LFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + ++ ++K+     S +  T+   L  CA+   L +GK +H   ++       FV N+LL
Sbjct: 379 LNMFVEIKQDGE--SLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MY  C S                   D     F+ +  ++VV+WNT+++ Y +     +
Sbjct: 437 AMYFKCGS------------------IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQ 478

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           A+  F  M   G++P  I+ V V  A S  G
Sbjct: 479 ALTVFESMKTAGVKPDEITMVGVLSACSHTG 509



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 41/144 (28%)

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           Y GL+D G + F  M +EY + P+++HY C+ D+LGRV ++ E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
            G+LLG+ R+HG++EL E  A+   +M  +NS                    + K    M
Sbjct: 819 -GALLGASRIHGNTELGEKAAQMFFKMGPQNS-------------------GISK----M 854

Query: 746 RERGLRKEVGCSWIDVGGYVNRFA 769
           R+ G++K  G SW +V   ++ F+
Sbjct: 855 RDVGVQKVPGYSWFEVQNKIHTFS 878


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 222/754 (29%), Positives = 382/754 (50%), Gaps = 67/754 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+   H +   IP     +  + LS  C+      A +LF  +    TV  NTII   V 
Sbjct: 55  QITSAHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVK 114

Query: 83  NNL------PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           N         Y+ +++Y  +K S       + T+++V  AC   +++  G+  H   ++ 
Sbjct: 115 NGYERQALDTYDLMMVYESVKPS-------HITFATVFSACGGLKDVNCGRRNHGLVLKV 167

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
             + + +V N+LL MY+ C  + DA                   +VF+ +   N V + T
Sbjct: 168 GFDSNIYVSNALLCMYTKCGLNEDAF------------------RVFEGIVEPNEVTFTT 209

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD---------- 246
           ++    +T +  E +  FR+MLR GI   ++S   +    +    +   D          
Sbjct: 210 MMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQ 269

Query: 247 --VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              ++ L VK G E   DL + +S + MYA+ G  D A  +F+N  + +   WN MI GY
Sbjct: 270 GKQIHTLAVKHGFE--RDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGY 327

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
                  +A+E F Q ++      DDVT+++ L+A  +  ++ +G+Q             
Sbjct: 328 GNRCDSEKALECF-QRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQ------------- 373

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             + + +    ++SWN ++S + Q+    E + L  +MQ Q    D  T+  +LS+ + L
Sbjct: 374 --IFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAEL 431

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              + GKQ HA   + G + +  + S LI++Y+K G ++ ++ +F K    + D   WN+
Sbjct: 432 GLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSK--LSELDVVCWNS 489

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIAG++ N L ++A   F++M +    P+  + A++  +C  + ++  G+Q+H   I+  
Sbjct: 490 MIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDG 549

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              NVFVG+SL++MY K G +  A   F  +P KN VT+  MI GY  +G    A+SL++
Sbjct: 550 YVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYK 609

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G +PD ITFVAVL+ACS++ LVDEG++IF  M Q++++ P  +HY C+ D LGRV
Sbjct: 610 DMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRV 669

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G+  E    +  +  + + + +W  +L SCR+H +  LA+  A++L  ++ RNS P  +V
Sbjct: 670 GRFNEVEVILDTMPYKDDTI-VWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAP--YV 726

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           LL+N+Y+  G W++   VR  M +  + K+ G S
Sbjct: 727 LLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYS 760



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 261/571 (45%), Gaps = 85/571 (14%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++L++C   ++L   K +H    R       F+ N L+++YS C     A  V  K    
Sbjct: 10  NLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHK 69

Query: 172 DYSKYDLV-------------CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MM 217
           +   Y+ +             C++F  M  RN V+ NTI++  VK     +A+  +  MM
Sbjct: 70  NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +   ++PS I+F  VF A   L D       +GL++K+G  + ++++V+++ + MY + G
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVG--FDSNIYVSNALLCMYTKCG 187

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + A ++F+  +E N   + TM+GG  Q N   E +ELF  +L    I  D V+  + L
Sbjct: 188 LNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLR-KGICVDSVSLSTIL 246

Query: 338 SAVSQ------------LQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------ 373
              ++            L     G+Q+H   +K+     + + N++++            
Sbjct: 247 VICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAE 306

Query: 374 --------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
                     VVSWN MIS +      ++ L     MQ  G+  D VT   +L+A     
Sbjct: 307 NVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTAC---- 362

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
                                          KSG +K  RQIF+   S      +WNA++
Sbjct: 363 ------------------------------VKSGDVKVGRQIFDCMSSPSL--ISWNAIL 390

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +GY Q+    EA   FR+M      P+  T+A +L +C  +G +E GKQ+H  S +    
Sbjct: 391 SGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFY 450

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            +V+V +SLI++YSK G +  + +VF+K+ E + V + +MI G+  + + + AL+ F+ M
Sbjct: 451 DDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRM 510

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +  G  P   +F  + S+C+    + +G QI
Sbjct: 511 RQFGFFPSEFSFATIASSCAKLSSLFQGQQI 541



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           + + ++L +C    ++   K +H    R+ L  + F+   LID+YSK   I  A +VF K
Sbjct: 6   LNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDK 65

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           IP KN  +Y  ++  + +    + A  LF  M     E + ++   +++     G   + 
Sbjct: 66  IPHKNIFSYNAILSAFCKSNNLQYACRLFLQMP----ERNTVSLNTIITTMVKNGYERQA 121

Query: 634 LQIFDLMQQEYKIQPS 649
           L  +DLM     ++PS
Sbjct: 122 LDTYDLMMVYESVKPS 137


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 185/526 (35%), Positives = 295/526 (56%), Gaps = 26/526 (4%)

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   +N +I  +++  HP +A+ LFV++L+   +  D  T  + + + S++ +L +G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           + AY  K    +   VLN++I                     + V++WN MI+ +V+NG 
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESY 450
             E + +   M +     D VT+ ++ +A   L + ++G+    Y    G +    + + 
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+DMYAK G +  AR++F++  S  RD   W+AMI+GYTQ+    EA   F +M    V 
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHS--RDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           PN VT+ SVL AC  +G +E GK +H +  R  L   V +GT+L+D Y+K G I  A   
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F  +P +N+ T+T +I G   +G S  AL LF SM    IEP  +TF+ VL ACS+  LV
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           +EG + F  M Q+Y I P  EHY C+ D+LGR G + EAY+F++ +  E N + +W +LL
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAV-VWRALL 549

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            +C +H + E+ E   K+++ +D  +S  G ++LLSN YA  G W+N   VRKEM+E+G+
Sbjct: 550 SACTVHKNVEIGEEALKQIVPLDPCHS--GNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607

Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            K  GCS I++ G +  F ++D EHPQ  +IYE +  +   ++  G
Sbjct: 608 EKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVG 653



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 250/564 (44%), Gaps = 73/564 (12%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADV 247
           R+  ++N ++  +++     +A+  F  ML    + P   +  N   + S + D      
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V     K G  ++ D FV +S I MYA  G    A  +F     +    WN MI GYV+N
Sbjct: 193 VQAYAFKRG--FMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               E +E+F  +LE+    FD+VT LS  +A  +L + +LGQ +  Y  +  +     +
Sbjct: 251 GDWKEVVEMFKGMLEV-RAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL 309

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
             A+++                    RDVV+W+ MIS + Q+    E L +  EMQ    
Sbjct: 310 ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
             + VT+ ++LSA + L   + GK  H+Y+ R  +     + + L+D YAK G IK A +
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
            FE      R+  TW A+I G   NG   EA   F  MLE N+ P  VT   VL AC+  
Sbjct: 430 AFESMPV--RNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHG 487

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             +E G+       R+         TS+   Y     I +               Y  M+
Sbjct: 488 CLVEEGR-------RHF--------TSMTQDYGICPRIEH---------------YGCMV 517

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
              G+ G+ + A    R+M    IEP+A+ + A+LSAC+    V+ G +    ++Q   +
Sbjct: 518 DLLGRAGLIDEAYQFIRNMP---IEPNAVVWRALLSACTVHKNVEIGEEA---LKQIVPL 571

Query: 647 QPS-TEHYCCVADMLGRVGKVVEAYEFVKELGEEG-------NVLEIWGSLLG-SCRLHG 697
            P  + +Y  +++    VG+   A    KE+ E+G       +++E+ G++         
Sbjct: 572 DPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSE 631

Query: 698 HSELAEVVAKKLLEMDTRNSMPGY 721
           H +L E+  +K+ EM     M GY
Sbjct: 632 HPQLTEIY-EKVHEMIENIKMVGY 654



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 243/572 (42%), Gaps = 94/572 (16%)

Query: 1   MASSSVP---LPLP--PPPPTATPPPPQL---PQIHSLSPPIPKLKTP------TIRSRL 46
           MA++++P   LP P  P P   TP    L   PQ+H+       + T        + +  
Sbjct: 48  MAATALPAARLPAPGMPSPARQTPRRAALRDVPQLHATLLKSGAMTTSPDSFHSLLEAAA 107

Query: 47  SKICQEGRPHL--ARQLFDSITRP--TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPY 102
                    HL  A +LF     P  +   +N +I  F+    P +A+ L+ +M   +  
Sbjct: 108 LPAPATSSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTA- 166

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
            S D +T ++ +K+C+   +L +G+ V  +  +      +FV NSL++MY++C   + A 
Sbjct: 167 VSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAH 226

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           +                  +F T++ + V+AWN +++ YVK   + E V  F+ ML +  
Sbjct: 227 V------------------LFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRA 268

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
               ++ ++V  A   LGD      +     + G     +L  A++ + MYA+ G  D A
Sbjct: 269 PFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNL--ATALVDMYAKCGELDKA 326

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++FD    R+   W+ MI GY Q++   EA+ +F + ++  E+  +DVT +S LSA + 
Sbjct: 327 RRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNE-MQGTEVNPNDVTMVSVLSACAV 385

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
           L  L+ G+ +H+YI +  + L VI+  A+++                    R+  +W  +
Sbjct: 386 LGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTAL 445

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I     NG   E L L   M +       VT   +L A S                 HG 
Sbjct: 446 IKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACS-----------------HGC 488

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             E    +   M    G+                    +  M+    + GL++EA+   R
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEH--------------YGCMVDLLGRAGLIDEAYQFIR 534

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            M    + PN V   ++L AC    N+E+G++
Sbjct: 535 NM---PIEPNAVVWRALLSACTVHKNVEIGEE 563



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 186/411 (45%), Gaps = 38/411 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYSSVLKA 116
           A  LF ++     + WN +I G+V N    E + ++  M +  +P+   D  T  SV  A
Sbjct: 225 AHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPF---DEVTLLSVATA 281

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C    +  +G+ +  +        SR +  +L++MY+ C              E+D ++ 
Sbjct: 282 CGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKC-------------GELDKAR- 327

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++FD M  R+VVAW+ ++S Y +++R  EA+  F  M    + P+ ++ V+V  A 
Sbjct: 328 ----RLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSAC 383

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LG  ++   V+  + +   +    + + ++ +  YA+ GC   A K F++   RNT  
Sbjct: 384 AVLGALETGKWVHSYIRR--KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWT 441

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  +I G   N    EA+ELF  +LE + I   DVTF+  L A S    ++ G++    +
Sbjct: 442 WTALIKGMASNGRSREALELFSSMLEAN-IEPTDVTFIGVLLACSHGCLVEEGRRHFTSM 500

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            +++   P I            +  M+    + GL DE    +  M  +    ++V   A
Sbjct: 501 TQDYGICPRI----------EHYGCMVDLLGRAGLIDEAYQFIRNMPIEP---NAVVWRA 547

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           LLSA +  +N ++G++    ++       G    L + YA  G  K A  +
Sbjct: 548 LLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMV 598



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 14/249 (5%)

Query: 432 QTHAYLLRHG--------IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
           Q HA LL+ G         H     + L      S  +  A ++F       R   ++N 
Sbjct: 81  QLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSARSYNI 140

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGK--QLHGFSI 540
           +I  + + G  E+A   F +ML+   V+P+  T+A+ + +C+ M ++ +G+  Q + F  
Sbjct: 141 LIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKR 200

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
            +++DQ  FV  SLI MY+  G +  A  +F  +  K  + +  MI GY ++G  +  + 
Sbjct: 201 GFMVDQ--FVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVE 258

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           +F+ M       D +T ++V +AC   G  + G  I +  +++  ++ S      + DM 
Sbjct: 259 MFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLR-SRNLATALVDMY 317

Query: 661 GRVGKVVEA 669
            + G++ +A
Sbjct: 318 AKCGELDKA 326


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 204/636 (32%), Positives = 343/636 (53%), Gaps = 38/636 (5%)

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           R+   +A +  VS   KT R  EA+     M+  G R  +  F  +    + L   +   
Sbjct: 8   RKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGR 67

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            V+  ++K G +   + ++ ++ + MYA+ G    AR++FD+  +RN   W  MI  +V 
Sbjct: 68  EVHAAILKSGIQ--PNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVA 125

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL--- 363
            N  +EA + + + ++L     D VTF+S L+A +  + L LGQ++H  I++  + L   
Sbjct: 126 GNKNLEAFKCY-ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR 184

Query: 364 -----------------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                              ++ + + E++VV+W  +I+ + Q G  D  L L+  MQ+  
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              + +T  ++L   +     + GK+ H Y+++ G   E  + + LI MY K G ++ AR
Sbjct: 245 VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR 304

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F  +D   RD  TW AM+ GY Q G  +EA   FR+M +  + P+ +T  SVL +C+ 
Sbjct: 305 KLF--SDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSS 362

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
              ++ GK++H   +    + +V++ ++L+ MY+K G ++ A+ VF ++ E+N V +T +
Sbjct: 363 PAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAI 422

Query: 586 ILGY-GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           I G   QHG    AL  F  MK  GI+PD +TF +VLSAC++ GLV+EG + F  M  +Y
Sbjct: 423 ITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDY 482

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLEIWGSLLGSCRLHGHSE 700
            I+P  EHY C  D+LGR G + EA   +  +    G       +WG+LL +CR+H   E
Sbjct: 483 GIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGP-----SVWGALLSACRVHSDVE 537

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
             E  A+ +L++D  +   G +V LS+IYA  G +E+ +KVR+ M +R + KE G SWI+
Sbjct: 538 RGERAAENVLKLDPDDD--GAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 595

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V G V+ F  +D+ HP+S +IY  L +L  +++  G
Sbjct: 596 VDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMG 631



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 242/489 (49%), Gaps = 46/489 (9%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +L+ CA  R+L  G+ VH   ++    P+R++ N+LL+MY+ C S  DA        
Sbjct: 50  FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDAR------- 102

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VFD++R RN+V+W  ++  +V   + +EA + +  M   G +P  ++F
Sbjct: 103 -----------RVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTF 151

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           V++  A ++    +    V+  +V+ G E   +  V +S + MYA+ G    AR IFD  
Sbjct: 152 VSLLNAFTNPELLQLGQKVHMEIVEAGLEL--EPRVGTSLVGMYAKCGDISKARVIFDRL 209

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E+N   W  +I GY Q      A+EL ++ ++  E+  + +TF S L   +    L+ G
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALEL-LETMQQAEVAPNKITFASILQGCTTPAALEHG 268

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +++H YII++     + V+N++I                     RDVV+W  M++ + Q 
Sbjct: 269 KKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           G  DE + L   MQ+QG   D +T T++L++ S+      GK+ H  L+  G + +  ++
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG-YTQNGLLEEAFVAFRQMLEH 507
           S L+ MYAK G +  A  +F  N   +R+   W A+I G   Q+G   EA   F QM + 
Sbjct: 389 SALVSMYAKCGSMDDASLVF--NQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446

Query: 508 NVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + P+ VT  SVL AC  +G +E G K      + Y +   V   +  +D+  ++G +  
Sbjct: 447 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 506

Query: 567 AANVFAKIP 575
           A NV   +P
Sbjct: 507 AENVILSMP 515



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 197/438 (44%), Gaps = 54/438 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FDSI     V W  +I  FV  N   EA   Y  MK +      D  T+ S+L A 
Sbjct: 101 ARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG--CKPDKVTFVSLLNAF 158

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L++G+ VH   +         V  SL+ MY+ C                D SK  
Sbjct: 159 TNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC---------------GDISKAR 203

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   +FD +  +NVV W  +++ Y +  +   A+     M +  + P+ I+F ++    +
Sbjct: 204 V---IFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCT 260

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +    +    V+  +++ G  Y  +L+V +S I MY + G  + ARK+F +   R+   W
Sbjct: 261 TPAALEHGKKVHRYIIQSG--YGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             M+ GY Q     EAI LF + ++   I  D +TF S L++ S    L  G+++H  ++
Sbjct: 319 TAMVTGYAQLGFHDEAINLF-RRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLV 377

Query: 358 KNFVALPV--------------------IVLNAVIERDVVSWNTMISA-FVQNGLDDEGL 396
                L V                    +V N + ER+VV+W  +I+    Q+G   E L
Sbjct: 378 HAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREAL 437

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGI-----HFEGMESY 450
               +M+KQG   D VT T++LSA +++   + G K   +  L +GI     H+    S 
Sbjct: 438 EYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY----SC 493

Query: 451 LIDMYAKSGLIKTARQIF 468
            +D+  ++G ++ A  + 
Sbjct: 494 FVDLLGRAGHLEEAENVI 511



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 191/428 (44%), Gaps = 40/428 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +     V W  +I G+        A+ L   M+++    + +  T++S+L+ C
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE--VAPNKITFASILQGC 259

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK VH + I+       +V NSL+ MY  C    +A                
Sbjct: 260 TTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR--------------- 304

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  +  R+VV W  +V+ Y +   + EA+  FR M + GI+P  ++F +V  + S
Sbjct: 305 ---KLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS 361

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S    +    ++  LV  G  Y  D+++ S+ + MYA+ G  D A  +F+   ERN   W
Sbjct: 362 SPAFLQEGKRIHQQLVHAG--YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAW 419

Query: 298 NTMIGG-YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
             +I G   Q+    EA+E F Q ++   I  D VTF S LSA + +  ++ G+      
Sbjct: 420 TAIITGCCAQHGRCREALEYFDQ-MKKQGIKPDKVTFTSVLSACTHVGLVEEGR------ 472

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            K+F ++    L+  I+  V  ++  +    + G  +E   ++  M    F+       A
Sbjct: 473 -KHFRSM---YLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMP---FIPGPSVWGA 525

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA---RQIFEKNDS 473
           LLSA     + + G++    +L+     +G    L  +YA +G  + A   RQ+ EK D 
Sbjct: 526 LLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDV 585

Query: 474 GDRDQATW 481
                 +W
Sbjct: 586 VKEPGQSW 593



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 32/239 (13%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S ++  C+ G    AR+LF  +     V W  ++ G+       EAI L+ +M++   
Sbjct: 287 VNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG- 345

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               D  T++SVL +C+    L+ GK +H   +    N   ++ ++L++MY+ C S  DA
Sbjct: 346 -IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDA 404

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE-RYVEAVRQFRMMLRM 220
            +                  VF+ M  RNVVAW  I++       R  EA+  F  M + 
Sbjct: 405 SL------------------VFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
           GI+P  ++F +V  A + +G           LV+ G ++   +++      M     CF
Sbjct: 447 GIKPDKVTFTSVLSACTHVG-----------LVEEGRKHFRSMYLDYGIKPMVEHYSCF 494


>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 188/565 (33%), Positives = 297/565 (52%), Gaps = 53/565 (9%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D+  KI +N    N   WN  I GYV++ +P+ A+ L+  +L     + D+ T+     
Sbjct: 104 LDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFK 163

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
             +         ++  ++I+      + V NA+I                     RD+VS
Sbjct: 164 VCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVS 223

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN++I+ +V+ GL DE   L Y+M +   M D VT+  ++SA++ L N  +G++ H  + 
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK--------------------------- 470
             G++    + + L+DMY K   I+ A+ +FE                            
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343

Query: 471 --NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N+  ++D   WNA+I G+ Q    +EA   F +M   +V P+ +T+ + L AC+ +G 
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +++G  +H +  ++ L  NV +GT+L+DMY+K G I  A  VF ++P +NS+T+T +I G
Sbjct: 404 LDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICG 463

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
              HG    A+S F  M   G+ PD ITF+ VLSAC + GLVD+G   F  M  +Y I P
Sbjct: 464 LALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISP 523

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             +HY C+ D+LGR G + EA E ++ +  E + + +WG+L    R+HG+  + E  A K
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV-VWGALFFGSRIHGNVHMGERAASK 582

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           LLE+D  +   G +VLL+N+Y +   WE   KVRK M ERG+ K  GCS I++ G V  F
Sbjct: 583 LLELDPHDG--GIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDF 640

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMR 793
             +D+ HPQS KIYE L RL  ++ 
Sbjct: 641 IIRDKSHPQSEKIYECLTRLTRQIE 665



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 228/487 (46%), Gaps = 63/487 (12%)

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR-PSTISFV 230
           ++   D   K+ +     NV +WN  +  YV++E  + AV  +R MLR G   P   ++ 
Sbjct: 100 EWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +F   +      +A+ + G +++LG  + +DLFV ++ I +    G    ARK+FD   
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLG--FDSDLFVHNAIIHVLVSCGELLAARKLFDESC 217

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   WN++I GYV+     EA +L+ ++ EL+ ++ D+VT +  +SA +QL+ L LG+
Sbjct: 218 VRDLVSWNSIINGYVRCGLADEAFDLYYKMGELN-VMPDEVTMIGVVSASAQLENLALGR 276

Query: 351 QLHAYIIKNFVALPVIVLNAVI-------------------------------------- 372
           +LH  I +  + L V + NA++                                      
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        E+DVV WN +I  FVQ     E L L +EMQ      D +TV   LS
Sbjct: 337 LLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLS 396

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A S L   DVG   H Y+ +H +     + + L+DMYAK G IK A Q+FE+     R+ 
Sbjct: 397 ACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPG--RNS 454

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHG 537
            TW A+I G   +G    A   F +M+   + P+ +T   VL AC   G ++ G+   + 
Sbjct: 455 LTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQ 514

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG--- 593
            + +Y +   +   + L+D+  ++G +  A  +   +P E ++V +  +  G   HG   
Sbjct: 515 MTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVH 574

Query: 594 MSERALS 600
           M ERA S
Sbjct: 575 MGERAAS 581



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/489 (22%), Positives = 212/489 (43%), Gaps = 80/489 (16%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN  I G+V +  P  A+LLY  M +       DNYTY  + K CA          +  H
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIP-DNYTYPLLFKVCAGFSLSWTANEILGH 180

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            I+   +   FV+N+++++  +C   L A                   K+FD    R++V
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAAR------------------KLFDESCVRDLV 222

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           +WN+I++ YV+     EA   +  M  + + P  ++ + V  A + L +      ++  +
Sbjct: 223 SWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI 282

Query: 253 VKLG-------SEYVNDLFVA----------------------SSAIFMYAELGCFDFAR 283
            ++G       +  + D+++                       ++ +  YA+ G  + A 
Sbjct: 283 EEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAV 342

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F+   E++  +WN +IGG+VQ     EA+ LF + ++   +  D +T ++ LSA SQL
Sbjct: 343 RLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHE-MQASSVAPDKITVVNCLSACSQL 401

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
             LD+G  +H Y+ K+ + + V +  A+++                    R+ ++W  +I
Sbjct: 402 GALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI 442
                +G     +    EM   G + D +T   +LSA  +    D G+     +  ++GI
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521

Query: 443 -----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                H+    S L+D+  ++G ++ A ++  ++   + D   W A+  G   +G +   
Sbjct: 522 SPKLKHY----SCLVDLLGRAGFLEEAEELI-RSMPFEPDAVVWGALFFGSRIHGNVHMG 576

Query: 498 FVAFRQMLE 506
             A  ++LE
Sbjct: 577 ERAASKLLE 585



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 190/423 (44%), Gaps = 31/423 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD       V WN+II G+V   L  EA  LY +M + +     D  T   V+ A 
Sbjct: 209 ARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP--DEVTMIGVVSAS 266

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM----------VGLK 167
           A+  NL +G+ +H        N +  + N+L++MY  C +   A++          V   
Sbjct: 267 AQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWT 326

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            + + Y+K+ L+    ++F+ M  ++VV WN ++  +V+ +R  EA+  F  M    + P
Sbjct: 327 TMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAP 386

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             I+ VN   A S LG       ++  + K       ++ + ++ + MYA+ G    A +
Sbjct: 387 DKITVVNCLSACSQLGALDVGIWMHHYVDK--HNLTMNVALGTALVDMYAKCGNIKKAIQ 444

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F+    RN+  W  +I G   +  P  AI  F +++ +  +V D++TF+  LSA     
Sbjct: 445 VFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG-LVPDEITFIGVLSACCHGG 503

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            +D G+     +   +   P           +  ++ ++    + G  +E   L+  M  
Sbjct: 504 LVDQGRDYFYQMTSKYGISP----------KLKHYSCLVDLLGRAGFLEEAEELIRSMP- 552

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
             F  D+V   AL   +    N  +G++  + LL    H  G+   L +MY  + + + A
Sbjct: 553 --FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQA 610

Query: 465 RQI 467
           R++
Sbjct: 611 RKV 613


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 212/763 (27%), Positives = 390/763 (51%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++F+ +     V W ++++G+     P E I +Y  M+       C+  + S V+ +C
Sbjct: 113 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG--VGCNENSMSLVISSC 170

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              ++  +G+ +    ++        V NSL++M    L S+           VDY+ Y 
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISM----LGSMG---------NVDYANY- 216

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  R+ ++WN+I + Y +     E+ R F +M R     ++ +   +   L 
Sbjct: 217 ----IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 272

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   K    ++GL+VK+G + V  + V ++ + MYA  G    A  +F     ++   W
Sbjct: 273 HVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 330

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+++  +V +   ++A+ L   ++   + V + VTF SAL+A       + G+ LH  ++
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVV 389

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            + +    I+ NA++                     RDVV+WN +I  + ++   D+ L 
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV---GKQTHAYLLRHGIHF-EGMESYLID 453
               M+ +G   + +TV ++LSA   L   D+   GK  HAY++  G    E +++ LI 
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G + +++ +F   D  +R+  TWNAM+A    +G  EE      +M    V+ + 
Sbjct: 508 MYAKCGDLSSSQDLFNGLD--NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 565

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            + +  L A   +  +E G+QLHG +++   + + F+  +  DMYSK G I     +   
Sbjct: 566 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 625

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              ++  ++  +I   G+HG  E   + F  M   GI+P  +TFV++L+ACS+ GLVD+G
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 685

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  +D++ +++ ++P+ EH  CV D+LGR G++ EA  F+ ++  + N L +W SLL SC
Sbjct: 686 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASC 744

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           ++HG+ +     A+ L +++  +     +VL SN++A  G WE+V+ VRK+M  + ++K+
Sbjct: 745 KIHGNLDRGRKAAENLSKLEPEDD--SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 802

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ HPQ+ +IY  LE +   ++ +G
Sbjct: 803 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 189/713 (26%), Positives = 323/713 (45%), Gaps = 78/713 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD------ 106
           GR   AR LFD +     V WNT++ G V   L  E +  + +M        CD      
Sbjct: 6   GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM--------CDLGIKPS 57

Query: 107 NYTYSSVLKACAETRNL-RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           ++  +S++ AC  + ++ R G  VH    +       +V  ++L++Y             
Sbjct: 58  SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV----------- 106

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
             Y  V  S+     KVF+ M  RNVV+W +++  Y       E +  ++ M   G+  +
Sbjct: 107 --YGLVSCSR-----KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 159

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             S   V  +   L D      + G +VK G E  + L V +S I M   +G  D+A  I
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLE--SKLAVENSLISMLGSMGNVDYANYI 217

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-DEIVFDDVTFLSALSAVSQLQ 344
           FD   ER+T  WN++   Y QN H  E+  +F  +    DE+  +  T  + LS +  + 
Sbjct: 218 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVD 275

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
               G+ +H  ++K      V V N ++                     +D++SWN++++
Sbjct: 276 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           +FV +G   + L L+  M   G  ++ VT T+ L+A       + G+  H  ++  G+ +
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 395

Query: 445 -EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            + + + L+ MY K G +  +R++  +     RD   WNA+I GY ++   ++A  AF+ 
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIGGYAEDEDPDKALAAFQT 453

Query: 504 MLEHNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    V+ N +T+ SVL AC   G+ +E GK LH + +    + +  V  SLI MY+K G
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ + ++F  +  +N +T+  M+     HG  E  L L   M+  G+  D  +F   LS
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEH----YCCVADMLGRVGKVVEAYEFVKELGE 678
           A +   +++EG Q+  L      ++   EH    +   ADM  + G++ E    VK L  
Sbjct: 574 AAAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMYSKCGEIGEV---VKMLPP 625

Query: 679 EGN-VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             N  L  W  L+ +   HG+ E       ++LEM  +   PG+   +S + A
Sbjct: 626 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK---PGHVTFVSLLTA 675



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 286/608 (47%), Gaps = 52/608 (8%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S +   G    A  +FD ++   T+ WN+I   +  N    E+  ++S M++   + 
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF--HD 257

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             ++ T S++L       + + G+ +H   ++   +    V N+LL MY+    S++A +
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF  M  +++++WN++++ +V   R ++A+     M+  G  
Sbjct: 318 ------------------VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            + ++F +   A  +   ++   +++GL+V  G  Y  +  + ++ + MY ++G    +R
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESR 417

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++      R+   WN +IGGY ++  P +A+  F Q + ++ +  + +T +S LSA    
Sbjct: 418 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLP 476

Query: 344 QE-LDLGQQLHAYIIK------NFVALPVIVL--------------NAVIERDVVSWNTM 382
            + L+ G+ LHAYI+         V   +I +              N +  R++++WN M
Sbjct: 477 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 536

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++A   +G  +E L LV +M+  G  +D  + +  LSAA+ L   + G+Q H   ++ G 
Sbjct: 537 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 596

Query: 443 -HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            H   + +   DMY+K G I    ++     S +R   +WN +I+   ++G  EE    F
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGEVVKMLPP--SVNRSLPSWNILISALGRHGYFEEVCATF 654

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSK 560
            +MLE  + P  VT  S+L AC+  G ++ G   +    R + L+  +     +ID+  +
Sbjct: 655 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 714

Query: 561 SGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           SG +  A    +K+P K N + + +++     HG  +R      ++     E D+   V 
Sbjct: 715 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS---VY 771

Query: 620 VLSACSYA 627
           VLS+  +A
Sbjct: 772 VLSSNMFA 779



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 188/384 (48%), Gaps = 25/384 (6%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + G    AR +FD    RN   WNTM+ G V+    +E +E F ++ +L  I     
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLG-IKPSSF 59

Query: 332 TFLSALSAVSQLQEL-DLGQQLHAYIIKNFVALPVIVLNAVI------------------ 372
              S ++A  +   +   G Q+H ++ K+ +   V V  A++                  
Sbjct: 60  VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
             +R+VVSW +++  +   G  +E + +   M+ +G   +  +++ ++S+   L+++ +G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           +Q    +++ G+  +  +E+ LI M    G +  A  IF++    +RD  +WN++ A Y 
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS--ERDTISWNSIAAAYA 237

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           QNG +EE+F  F  M   +   N  T++++L     + + + G+ +HG  ++   D  V 
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V  +L+ MY+ +G    A  VF ++P K+ +++ +++  +   G S  AL L  SM   G
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 357

Query: 610 IEPDAITFVAVLSACSYAGLVDEG 633
              + +TF + L+AC      ++G
Sbjct: 358 KSVNYVTFTSALAACFTPDFFEKG 381



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 135/251 (53%), Gaps = 12/251 (4%)

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G +K AR +F+      R++ +WN M++G  + GL  E    FR+M +  + P+ 
Sbjct: 1   MYTKFGRVKPARHLFDIMPV--RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58

Query: 514 VTIASVLPACNPMGNI-ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             IAS++ AC   G++   G Q+HGF  +  L  +V+V T+++ +Y   G+++ +  VF 
Sbjct: 59  FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           ++P++N V++T++++GY   G  E  + +++ M+G G+  +  +   V+S+C    L DE
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGL--LKDE 176

Query: 633 GLQ---IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            L    I  +++   + + + E+   +  MLG +G V  A     ++ E   +   W S+
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVEN--SLISMLGSMGNVDYANYIFDQMSERDTI--SWNSI 232

Query: 690 LGSCRLHGHSE 700
             +   +GH E
Sbjct: 233 AAAYAQNGHIE 243


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 191/657 (29%), Positives = 348/657 (52%), Gaps = 28/657 (4%)

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           + D   +    +R  +    N ++  +        A+  +R ML  G RP   +F  V  
Sbjct: 56  RMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVK 115

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
             + LG        +G+++KLG E+  D++  +S +  YA+LG  + A ++FD    R+ 
Sbjct: 116 CCARLGGLDEGRAAHGMVIKLGLEH--DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDI 173

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN M+ GYV N     A+  F ++ +  E+  D V  ++AL+A         G+++H 
Sbjct: 174 VTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHG 233

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
           Y+I++ +   + V  ++++                    R VV+WN MI  +  N   DE
Sbjct: 234 YVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
                 +M+ +G  ++ VT   LL+A +   +   G+  H Y++R   +    +E+ L++
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY K G ++++ +IF K    ++   +WN MIA Y    +  EA   F ++L   + P+ 
Sbjct: 354 MYGKVGKVESSEKIFGK--IANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            T+++V+PA   +G++   +Q+H + I     +N  +  +++ MY++SG +  +  +F K
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  K+ +++ TMI+GY  HG  + AL +F  MK  G++P+  TFV+VL+ACS +GLVDEG
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
              F+LM QEY + P  EHY C+ D+LGR G + E  +F++ +  +     +WGSLL + 
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTS-RVWGSLLTAS 590

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R     ++AE  A+++ +++  N+  G +++LS++YA+ G WE+V++VR  M+E+GLR+ 
Sbjct: 591 RNQNDIDIAEYAAERIFQLEHDNT--GCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRT 648

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPR 810
              S +++      FA+ D  H QS  I+E+ + L+ +++   +   Q+  V    R
Sbjct: 649 EPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDDTRNQSYPVPVATR 705



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 143/541 (26%), Positives = 243/541 (44%), Gaps = 58/541 (10%)

Query: 14  PPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIW 73
           P T+  PPP+LP            K  + +S +  +  EGR   A +   ++  P   + 
Sbjct: 27  PATSKEPPPRLPP-----------KRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLH 75

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N +I GF    LP  A+  Y  M +       D +T+  V+K CA    L  G+A H   
Sbjct: 76  NVMIRGFADAGLPAGALAAYRGMLEDGARP--DRFTFPVVVKCCARLGGLDEGRAAHGMV 133

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           I+       +  NSL+  Y+      DAE                  +VFD M  R++V 
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAE------------------RVFDGMPVRDIVT 175

Query: 194 WNTIVSWYVKTERYVEAVRQFRMML-RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           WN +V  YV       A+  F+ M   + ++  ++  +    A            ++G +
Sbjct: 176 WNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYV 235

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           ++ G E   D+ V +S + MY + G   +AR +F     R    WN MIGGY  N  P E
Sbjct: 236 IRHGLE--QDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDE 293

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A + F+Q +  + +  + VT ++ L+A +Q +    G+ +H Y+++      V++  A++
Sbjct: 294 AFDCFMQ-MRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
           E                    + +VSWN MI+A++   +  E + L  E+  Q    D  
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKN 471
           T++ ++ A   L +    +Q H+Y++  G     +  + ++ MYA+SG +  +R+IF+K 
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM 472

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
            S  +D  +WN MI GY  +G  + A   F +M  + + PN  T  SVL AC+  G ++ 
Sbjct: 473 VS--KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDE 530

Query: 532 G 532
           G
Sbjct: 531 G 531



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 23/323 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+ G    AR +F ++   T V WN +I G+  N  P EA   + QM+      
Sbjct: 249 SLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEG--L 306

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             +  T  ++L ACA+T +   G++VH + +R    P   +  +LL MY           
Sbjct: 307 QVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYG---------- 356

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K  +V+ S+     K+F  +  + +V+WN +++ Y+  E Y EA+  F  +L   + 
Sbjct: 357 ---KVGKVESSE-----KIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLY 408

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   +   V PA   LG  +    ++  ++ LG  Y  +  + ++ + MYA  G    +R
Sbjct: 409 PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLG--YAENTLIMNAVLHMYARSGDVVASR 466

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +IFD  + ++   WNTMI GY  +     A+E+F + ++ + +  ++ TF+S L+A S  
Sbjct: 467 EIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE-MKYNGLQPNESTFVSVLTACSVS 525

Query: 344 QELDLGQQLHAYIIKNFVALPVI 366
             +D G      +++ +  +P I
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQI 548


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 212/763 (27%), Positives = 390/763 (51%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++F+ +     V W ++++G+     P E I +Y  M+       C+  + S V+ +C
Sbjct: 96  SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEG--VGCNENSMSLVISSC 153

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              ++  +G+ +    ++        V NSL++M    L S+           VDY+ Y 
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISM----LGSMG---------NVDYANY- 199

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  R+ ++WN+I + Y +     E+ R F +M R     ++ +   +   L 
Sbjct: 200 ----IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 255

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   K    ++GL+VK+G + V  + V ++ + MYA  G    A  +F     ++   W
Sbjct: 256 HVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 313

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+++  +V +   ++A+ L   ++   + V + VTF SAL+A       + G+ LH  ++
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVV 372

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            + +    I+ NA++                     RDVV+WN +I  + ++   D+ L 
Sbjct: 373 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 432

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV---GKQTHAYLLRHGIHF-EGMESYLID 453
               M+ +G   + +TV ++LSA   L   D+   GK  HAY++  G    E +++ LI 
Sbjct: 433 AFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G + +++ +F   D  +R+  TWNAM+A    +G  EE      +M    V+ + 
Sbjct: 491 MYAKCGDLSSSQDLFNGLD--NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 548

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            + +  L A   +  +E G+QLHG +++   + + F+  +  DMYSK G I     +   
Sbjct: 549 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 608

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              ++  ++  +I   G+HG  E   + F  M   GI+P  +TFV++L+ACS+ GLVD+G
Sbjct: 609 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 668

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  +D++ +++ ++P+ EH  CV D+LGR G++ EA  F+ ++  + N L +W SLL SC
Sbjct: 669 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASC 727

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           ++HG+ +     A+ L +++  +     +VL SN++A  G WE+V+ VRK+M  + ++K+
Sbjct: 728 KIHGNLDRGRKAAENLSKLEPEDD--SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 785

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ HPQ+ +IY  LE +   ++ +G
Sbjct: 786 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 828



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 271/541 (50%), Gaps = 43/541 (7%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD-YKSADV 247
           RN V+WNT++S  V+   Y+E +  FR M  +GI+PS+    ++  A    G  ++    
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+G + K G   ++D++V+++ + +Y   G    +RK+F+   +RN   W +++ GY   
Sbjct: 64  VHGFVAKSG--LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
             P E I+++ + +  + +  ++ +    +S+   L++  LG+Q+   ++K+ +   + V
Sbjct: 122 GEPEEVIDIY-KGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            N++I                    ERD +SWN++ +A+ QNG  +E   +   M++   
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---SYLIDMYAKSGLIKTA 464
            ++S TV+ LLS   ++ +Q  G+  H  +++ G  F+ +    + L+ MYA +G    A
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG--FDSVVCVCNTLLRMYAGAGRSVEA 298

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +F++  +  +D  +WN+++A +  +G   +A      M+    + N VT  S L AC 
Sbjct: 299 NLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
                E G+ LHG  +   L  N  +G +L+ MY K G ++ +  V  ++P ++ V +  
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG-LVDEGLQIFDLMQQE 643
           +I GY +    ++AL+ F++M+  G+  + IT V+VLSAC   G L++ G  +       
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL-----HA 471

Query: 644 YKIQP---STEHY-CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           Y +     S EH    +  M  + G +  + +    L +  N++  W ++L +   HGH 
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNII-TWNAMLAANAHHGHG 529

Query: 700 E 700
           E
Sbjct: 530 E 530



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 286/608 (47%), Gaps = 52/608 (8%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S +   G    A  +FD ++   T+ WN+I   +  N    E+  ++S M++   + 
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF--HD 240

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             ++ T S++L       + + G+ +H   ++   +    V N+LL MY+    S++A +
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF  M  +++++WN++++ +V   R ++A+     M+  G  
Sbjct: 301 ------------------VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            + ++F +   A  +   ++   +++GL+V  G  Y  +  + ++ + MY ++G    +R
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESR 400

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++      R+   WN +IGGY ++  P +A+  F Q + ++ +  + +T +S LSA    
Sbjct: 401 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLP 459

Query: 344 QE-LDLGQQLHAYIIK------NFVALPVIVL--------------NAVIERDVVSWNTM 382
            + L+ G+ LHAYI+         V   +I +              N +  R++++WN M
Sbjct: 460 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 519

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++A   +G  +E L LV +M+  G  +D  + +  LSAA+ L   + G+Q H   ++ G 
Sbjct: 520 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 579

Query: 443 -HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            H   + +   DMY+K G I    ++     S +R   +WN +I+   ++G  EE    F
Sbjct: 580 EHDSFIFNAAADMYSKCGEIGEVVKMLPP--SVNRSLPSWNILISALGRHGYFEEVCATF 637

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSK 560
            +MLE  + P  VT  S+L AC+  G ++ G   +    R + L+  +     +ID+  +
Sbjct: 638 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 697

Query: 561 SGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           SG +  A    +K+P K N + + +++     HG  +R      ++     E D+   V 
Sbjct: 698 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS---VY 754

Query: 620 VLSACSYA 627
           VLS+  +A
Sbjct: 755 VLSSNMFA 762



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG-LVDE 632
           +P +N V++ TM+ G  + G+    +  FR M   GI+P +    ++++AC  +G +  E
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 633 GLQI 636
           G+Q+
Sbjct: 61  GVQV 64


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 219/722 (30%), Positives = 385/722 (53%), Gaps = 62/722 (8%)

Query: 91  LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
           +L+     +S Y +C ++ YSS+L +C    NL+  K +H   I         V + L+ 
Sbjct: 36  VLFRTHHLNSHYLTC-SFPYSSLLHSC---NNLQALKRIHASLIVSSGFQPLSVASKLIT 91

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           +YS                  D+     +C  F+     N V WN+I+  +V +  +  A
Sbjct: 92  LYSQL---------------NDFRSAFSICNSFE---EPNTVIWNSIIKSHVDSGLFGYA 133

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           + Q+  M  +G+   + +F  +  A+ SLG   +  + V+ + +K+G  +  D++  ++ 
Sbjct: 134 LLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMG--FGQDVYFGNTM 191

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVF 328
           + +Y + G    A K+FD    R+   W ++I GY+         +LF ++ +E++    
Sbjct: 192 LEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRMEMEP--- 248

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
           + VT +  L A S  + ++ G++LH+Y+IK    +   V N+++                
Sbjct: 249 NSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETF 308

Query: 373 -----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV-TVTALLSAASNLRN 426
                ERD++SWN +I+ +   G   E      EM+++  +  S+ ++T ++SA +N  N
Sbjct: 309 FSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRRE--VTSSIESLTLVVSAIANCAN 366

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
              G   H   ++ G+H   + + L+ +YAK G ++ + Q+F   D   R+  TW++M++
Sbjct: 367 LSEGGMLHCSAIKTGLHDTVLMTCLLALYAKCGALEISAQLFR--DIPHRNSITWSSMMS 424

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL-- 544
           G+TQNG  +EA   ++QML   + PN   I++++ A   +G ++LGK  H F IR L   
Sbjct: 425 GFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSW 484

Query: 545 --DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
             + +  + TSL++MY + G I+ A   F ++  K+ VT+T+MI G+G HG++  AL  F
Sbjct: 485 PEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFF 544

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
           +SM    ++P+++TF+++LSACS++GLV EG ++F  M+  ++I+P   HY C+ D+LGR
Sbjct: 545 KSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGR 604

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            GK+ EA   + +L    +   IWG+LL + R+H   +L E  A+KLLE++  N   GY+
Sbjct: 605 SGKLKEALTVILKLVTCPDS-RIWGALLAASRVHEDKKLGEYAAEKLLELEPDN--VGYY 661

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
            L SNI A    W  V++VR+ M ER L+K+ G S I+V G ++ F S D  H Q  +I 
Sbjct: 662 TLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVEEIC 721

Query: 783 EM 784
           +M
Sbjct: 722 KM 723



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 270/593 (45%), Gaps = 57/593 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  + +S   P TVIWN+II   V + L   A+L Y +M++     + D++T+  + +A 
Sbjct: 102 AFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELG--VAHDSFTFPIINQAI 159

Query: 118 AETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                 +  G+ VHC  ++       +  N++L +Y  C S  +A               
Sbjct: 160 WSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNAS-------------- 205

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+FD M  R++V+W +I+S Y+  E +    + F  M RM + P++++ V +  A 
Sbjct: 206 ----KLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKM-RMEMEPNSVTMVVMLQAC 260

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLERNTE 295
           S+         ++  ++K G  ++ D  V +S + MY +  G  +     F    ER+  
Sbjct: 261 SAFESVNEGRELHSYVIKKG--FMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDII 318

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +I  Y       E  E F ++        + +T +  +SA++    L  G  LH  
Sbjct: 319 SWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLV--VSAIANCANLSEGGMLHCS 376

Query: 356 IIKN--------------FVALPVIVLNAVIERDV-----VSWNTMISAFVQNGLDDEGL 396
            IK               +     + ++A + RD+     ++W++M+S F QNG   E +
Sbjct: 377 AIKTGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAI 436

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-----EGMESYL 451
            L  +M   G   +   ++ L+ A ++L    +GK THA+ +R+   +       +E+ L
Sbjct: 437 ELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSL 496

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ++MY + G I +A   F  N    +D  TW +MI G+  +GL  EA   F+ MLE  V P
Sbjct: 497 LNMYIRCGSISSALICF--NRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQP 554

Query: 512 NVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           N VT  S+L AC+  G +  G ++ H     + ++ ++   T ++D+  +SG +  A  V
Sbjct: 555 NSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTV 614

Query: 571 FAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
             K+    +S  +  ++     H   ++ L  + + K   +EPD + +  + S
Sbjct: 615 ILKLVTCPDSRIWGALLAASRVH--EDKKLGEYAAEKLLELEPDNVGYYTLWS 665



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   ++ QLF  I    ++ W++++ GF  N    EAI LY QM  S    + D    S+
Sbjct: 399 GALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHD--IIST 456

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSN----PSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           ++ A      L++GKA H  FIR  S+     S  +  SLLNMY  C S   A       
Sbjct: 457 LVIAYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSA------- 509

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                    L+C  F+ +  ++VV W +++  +       EA++ F+ ML   ++P++++
Sbjct: 510 ---------LIC--FNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVT 558

Query: 229 FVNVFPALSSLG 240
           F+++  A S  G
Sbjct: 559 FLSLLSACSHSG 570


>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 188/565 (33%), Positives = 297/565 (52%), Gaps = 53/565 (9%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D+  KI +N    N   WN  I GYV++ +P+ A+ L+  +L     + D+ T+     
Sbjct: 104 LDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFK 163

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
             +         ++  ++I+      + V NA+I                     RD+VS
Sbjct: 164 VCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVS 223

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN++I+ +V+ GL DE   L Y+M +   M D VT+  ++SA++ L N  +G++ H  + 
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK--------------------------- 470
             G++    + + L+DMY K   I+ A+ +FE                            
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343

Query: 471 --NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N+  ++D   WNA+I G+ Q    +EA   F +M   +V P+ +T+ + L AC+ +G 
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +++G  +H +  ++ L  NV +GT+L+DMY+K G I  A  VF ++P +NS+T+T +I G
Sbjct: 404 LDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICG 463

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
              HG    A+S F  M   G+ PD ITF+ VLSAC + GLVD+G   F  M  +Y I P
Sbjct: 464 LALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISP 523

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             +HY C+ D+LGR G + EA E ++ +  E + + +WG+L    R+HG+  + E  A K
Sbjct: 524 KLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAV-VWGALFFGSRIHGNVHMGERAASK 582

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           LLE+D  +   G +VLL+N+Y +   WE   KVRK M ERG+ K  GCS I++ G V  F
Sbjct: 583 LLELDPHDG--GIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDF 640

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMR 793
             +D+ HPQS KIYE L RL  ++ 
Sbjct: 641 IIRDKSHPQSEKIYECLTRLTRQIE 665



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 227/487 (46%), Gaps = 63/487 (12%)

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR-PSTISFV 230
           ++   D   K+ +     N  +WN  +  YV++E  + AV  +R MLR G   P   ++ 
Sbjct: 100 EWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYP 159

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +F   +      +A+ + G +++LG  + +DLFV ++ I +    G    ARK+FD   
Sbjct: 160 LLFKVCAGFSLSWTANEILGHVIQLG--FDSDLFVHNAIIHVLVSCGELLAARKLFDESC 217

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   WN++I GYV+     EA +L+ ++ EL+ ++ D+VT +  +SA +QL+ L LG+
Sbjct: 218 VRDLVSWNSIINGYVRCGLADEAFDLYYKMGELN-VMPDEVTMIGVVSASAQLENLALGR 276

Query: 351 QLHAYIIKNFVALPVIVLNAVI-------------------------------------- 372
           +LH  I +  + L V + NA++                                      
Sbjct: 277 KLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFG 336

Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                        E+DVV WN +I  FVQ     E L L +EMQ      D +TV   LS
Sbjct: 337 LLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLS 396

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           A S L   DVG   H Y+ +H +     + + L+DMYAK G IK A Q+FE+     R+ 
Sbjct: 397 ACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPG--RNS 454

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHG 537
            TW A+I G   +G    A   F +M+   + P+ +T   VL AC   G ++ G+   + 
Sbjct: 455 LTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQ 514

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG--- 593
            + +Y +   +   + L+D+  ++G +  A  +   +P E ++V +  +  G   HG   
Sbjct: 515 MTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVH 574

Query: 594 MSERALS 600
           M ERA S
Sbjct: 575 MGERAAS 581



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/489 (22%), Positives = 212/489 (43%), Gaps = 80/489 (16%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN  I G+V +  P  A+LLY  M +       DNYTY  + K CA          +  H
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIP-DNYTYPLLFKVCAGFSLSWTANEILGH 180

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
            I+   +   FV+N+++++  +C   L A                   K+FD    R++V
Sbjct: 181 VIQLGFDSDLFVHNAIIHVLVSCGELLAAR------------------KLFDESCVRDLV 222

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           +WN+I++ YV+     EA   +  M  + + P  ++ + V  A + L +      ++  +
Sbjct: 223 SWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI 282

Query: 253 VKLG-------SEYVNDLFVA----------------------SSAIFMYAELGCFDFAR 283
            ++G       +  + D+++                       ++ +  YA+ G  + A 
Sbjct: 283 EEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAV 342

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F+   E++  +WN +IGG+VQ     EA+ LF + ++   +  D +T ++ LSA SQL
Sbjct: 343 RLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHE-MQASSVAPDKITVVNCLSACSQL 401

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
             LD+G  +H Y+ K+ + + V +  A+++                    R+ ++W  +I
Sbjct: 402 GALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI 442
                +G     +    EM   G + D +T   +LSA  +    D G+     +  ++GI
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521

Query: 443 -----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                H+    S L+D+  ++G ++ A ++  ++   + D   W A+  G   +G +   
Sbjct: 522 SPKLKHY----SCLVDLLGRAGFLEEAEELI-RSMPFEPDAVVWGALFFGSRIHGNVHMG 576

Query: 498 FVAFRQMLE 506
             A  ++LE
Sbjct: 577 ERAASKLLE 585



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 190/423 (44%), Gaps = 31/423 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD       V WN+II G+V   L  EA  LY +M + +     D  T   V+ A 
Sbjct: 209 ARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMP--DEVTMIGVVSAS 266

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM----------VGLK 167
           A+  NL +G+ +H        N +  + N+L++MY  C +   A++          V   
Sbjct: 267 AQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWT 326

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            + + Y+K+ L+    ++F+ M  ++VV WN ++  +V+ +R  EA+  F  M    + P
Sbjct: 327 TMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAP 386

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             I+ VN   A S LG       ++  + K       ++ + ++ + MYA+ G    A +
Sbjct: 387 DKITVVNCLSACSQLGALDVGIWMHHYVDK--HNLTMNVALGTALVDMYAKCGNIKKAIQ 444

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F+    RN+  W  +I G   +  P  AI  F +++ +  +V D++TF+  LSA     
Sbjct: 445 VFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIG-LVPDEITFIGVLSACCHGG 503

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            +D G+     +   +   P           +  ++ ++    + G  +E   L+  M  
Sbjct: 504 LVDQGRDYFYQMTSKYGISP----------KLKHYSCLVDLLGRAGFLEEAEELIRSMP- 552

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTA 464
             F  D+V   AL   +    N  +G++  + LL    H  G+   L +MY  + + + A
Sbjct: 553 --FEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQA 610

Query: 465 RQI 467
           R++
Sbjct: 611 RKV 613


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 222/734 (30%), Positives = 369/734 (50%), Gaps = 60/734 (8%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD-- 106
           + + GR   A ++F      + V WN  + G V N     A+ ++  M     + SC+  
Sbjct: 114 LAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV----WGSCEPN 169

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           ++TYS  L ACA    L +G+AVH   +R       FV  SL+NMY+ C   + A M   
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC-GDMGAAM--- 225

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         + F  M  RNVV+W T ++ +V+ +  V A+   R M+R G+  + 
Sbjct: 226 --------------REFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  ++  A + +   + A  ++G+++K  +E   D  V  + I  Y   G  + + K+F
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLK--TEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 287 DNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           +      N  +W+  I G V N+  + +++L  ++     +  +D  + S  S+V+ ++ 
Sbjct: 330 EEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFH-QGLRPNDKCYASVFSSVNSIE- 386

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
              G QLH+  IK      ++V +A+                     ERD VSW  M++ 
Sbjct: 387 --FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  +G   E  +    M   GF  D V++TA+LSA +       GK+ H + LR      
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETT 504

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +    I MY+K   ++TAR+IF+      +DQ  W++MI+GY  NG  EEA   F+ M+
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPC--KDQVMWSSMISGYATNGCGEEAISLFQLMV 562

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             ++  +    +S+L  C  +      K LHG++I+  +  +  V +SL+ +YS+SG ++
Sbjct: 563 AASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMD 622

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF +I   + V +TT+I GY QHG S+ AL++F  M   G+ PD +  V+VLSACS
Sbjct: 623 DSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 682

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
             GLV++G   F+ M+  Y ++P  +HYCC+ D+LGR G++ EA  FV  +  + +++ +
Sbjct: 683 RNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM-V 741

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +L+ +CR+H  + L   V  K+ E    N   G    LSNI A  G+WE V ++RK M
Sbjct: 742 WSTLVAACRVHDDTVLGRFVENKIRE---GNYDSGSFATLSNILANSGDWEEVARIRKTM 798

Query: 746 RERGLRKEVGCSWI 759
             +G+ KE G S +
Sbjct: 799 --KGVNKEPGWSMV 810



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 256/541 (47%), Gaps = 50/541 (9%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            ++Y + L ACA      + + V+C   +   + + +V   ++++ +      DA     
Sbjct: 69  QFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDA----- 123

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         +VF      + V WN  VS  V+      AV  FR M+     P++
Sbjct: 124 -------------LRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 170

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            ++     A ++  +      V+GL+++   EY  D+FV +S + MYA+ G    A + F
Sbjct: 171 FTYSGALSACAAGEELSVGRAVHGLVLRRDPEY--DVFVGTSLVNMYAKCGDMGAAMREF 228

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                RN   W T I G+VQ++ PV A+ L  +++  + +  +  T  S L A +Q+  +
Sbjct: 229 WRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVR-NGVAINKYTATSILLACAQMSMV 287

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI-----------------ERDVVSWNTMISAFVQN 389
               Q+H  ++K  + L  +V  A+I                 E   VS  ++ SAF+ +
Sbjct: 288 REASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI-S 346

Query: 390 GLDDEGLM----LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHF 444
           G+ +  L+    L+  M  QG   +     ++ S+ +++   + G Q H+  ++ G IH 
Sbjct: 347 GVSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSI---EFGGQLHSSAIKEGFIHG 403

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + S L  MY++   ++ + ++FE+    +RD  +W AM+AG+  +G   EAF+ FR M
Sbjct: 404 ILVGSALSTMYSRCDNVQDSYKVFEEMQ--ERDGVSWTAMVAGFATHGHSVEAFLTFRNM 461

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           +     P+ V++ ++L ACN    +  GK++HG ++R +  +  F+    I MYSK   +
Sbjct: 462 ILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLR-VYGETTFINDCFISMYSKCQGV 520

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A  +F   P K+ V +++MI GY  +G  E A+SLF+ M    I  D+    ++LS C
Sbjct: 521 QTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLC 580

Query: 625 S 625
           +
Sbjct: 581 A 581



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 29/434 (6%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  S+ N   A +       A+ VY    K G     + +V +  + + A+ G    A 
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDG--LSGNAYVCTGMVDLLAKSGRLRDAL 124

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F +    +   WN  + G V+N     A+E+F  ++       +  T+  ALSA +  
Sbjct: 125 RVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAG 183

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
           +EL +G+ +H  +++      V V  +++                     R+VVSW T I
Sbjct: 184 EELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAI 243

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + FVQ+      ++L+ EM + G  I+  T T++L A + +       Q H  +L+  ++
Sbjct: 244 AGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMY 303

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  ++  LI  Y   G I+ + ++FE+  +   +++ W+A I+G + + LL    +  R
Sbjct: 304 LDCVVKEALISTYTNFGFIELSEKVFEEAGTVS-NRSIWSAFISGVSNHSLLRSVQL-LR 361

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M    + PN    ASV  + N   +IE G QLH  +I+      + VG++L  MYS+  
Sbjct: 362 RMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCD 418

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  +  VF ++ E++ V++T M+ G+  HG S  A   FR+M   G +PD ++  A+LS
Sbjct: 419 NVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILS 478

Query: 623 ACSYAGLVDEGLQI 636
           AC+ +  + +G ++
Sbjct: 479 ACNRSECLLKGKEV 492


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 187/630 (29%), Positives = 344/630 (54%), Gaps = 37/630 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD M + +   WN ++  +     Y+EAV+ +  M+  G++  T ++  V  +++ + 
Sbjct: 85  QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    ++ +++KLG  +V+D++V +S I +Y +LGC   A K+F+   ER+   WN+M
Sbjct: 145 SLEEGKKIHAMVIKLG--FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY+       ++ LF ++L+      D  + +SAL A S +    +G+++H + +++ 
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261

Query: 361 VALPVI---------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
           +    +                     + N +I+R++V+WN MI  + +NG   +  +  
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321

Query: 400 YEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYA 456
            +M +Q G   D +T   LL A++ L     G+  H Y +R G   H   +E+ LIDMY 
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMV-LETALIDMYG 376

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +K+A  IF++    +++  +WN++IA Y QNG    A   F+++ + ++ P+  TI
Sbjct: 377 ECGQLKSAEVIFDR--MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           AS+LPA     ++  G+++H + ++     N  +  SL+ MY+  G +  A   F  I  
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V++ ++I+ Y  HG    ++ LF  M    + P+  TF ++L+ACS +G+VDEG + 
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M++EY I P  EHY C+ D++GR G    A  F++E+        IWGSLL + R H
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA-RIWGSLLNASRNH 613

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
               +AE  A+++ +M+  N+  G +VLL N+YAE G WE+V++++  M  +G+ +    
Sbjct: 614 KDITIAEFAAEQIFKMEHDNT--GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           S ++  G  + F + D+ H  ++KIYE+L+
Sbjct: 672 STVEAKGKSHVFTNGDRSHVATNKIYEVLD 701



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/541 (26%), Positives = 259/541 (47%), Gaps = 51/541 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A QLFD + +    +WN +I GF    L  EA+  YS+M  +      D +TY  V+K+ 
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG--VKADTFTYPFVIKSV 140

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +L  GK +H   I+       +V NSL+++Y     + DAE               
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE--------------- 185

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVF+ M  R++V+WN+++S Y+       ++  F+ ML+ G +P   S ++   A S
Sbjct: 186 ---KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   K    ++   V+   E   D+ V +S + MY++ G   +A +IF+  ++RN   W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIE-TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MIG Y +N    +A   F ++ E + +  D +T ++ L A + L+    G+ +H Y +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAM 357

Query: 358 KNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +    LP +VL   +                     E++V+SWN++I+A+VQNG +   L
Sbjct: 358 RRGF-LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
            L  E+     + DS T+ ++L A +   +   G++ HAY+++        + + L+ MY
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A  G ++ AR+ F  N    +D  +WN++I  Y  +G    +   F +M+   V PN  T
Sbjct: 477 AMCGDLEDARKCF--NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534

Query: 516 IASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            AS+L AC+  G ++ G +        Y +D  +     ++D+  ++G  + A     ++
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594

Query: 575 P 575
           P
Sbjct: 595 P 595



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 209/393 (53%), Gaps = 30/393 (7%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           + A+  +A+    + A ++FD   + +  +WN MI G+      +EA++ + +++    +
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV-FAGV 126

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             D  T+   + +V+ +  L+ G+++HA +IK      V V N++I              
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186

Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                 ERD+VSWN+MIS ++  G     LML  EM K GF  D  +  + L A S++ +
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246

Query: 427 QDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
             +GK+ H + +R  I      + + ++DMY+K G +  A +IF  N    R+   WN M
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF--NGMIQRNIVAWNVM 304

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           I  Y +NG + +AF+ F++M E N + P+V+T  ++LPA      I  G+ +HG+++R  
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRG 360

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              ++ + T+LIDMY + G +  A  +F ++ EKN +++ ++I  Y Q+G +  AL LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            +    + PD+ T  ++L A + +  + EG +I
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  +FD +     + WN+II  +V N   Y A+ L+ ++  SS     D+ T +S
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP--DSTTIAS 436

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A AE+ +L  G+ +H + ++     +  + NSL++MY+ C    DA           
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR---------- 486

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   K F+ +  ++VV+WN+I+  Y        +V  F  M+   + P+  +F ++
Sbjct: 487 --------KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538

Query: 233 FPALSSLG 240
             A S  G
Sbjct: 539 LAACSISG 546


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 238/812 (29%), Positives = 410/812 (50%), Gaps = 73/812 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+H L          T+ + L  +   C  G P LA+++FD       + WN ++  +  
Sbjct: 188 QVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAK 247

Query: 83  NNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLKACAETRNLR-IGKAVHCHFIRCFSN 139
                    L+  M++           +T+ S++ A + +     +   V    ++   +
Sbjct: 248 KGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCS 307

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +V ++L++ ++             ++   D +K      +F +++++N V  N ++ 
Sbjct: 308 SDLYVGSALVSAFA-------------RHGLTDEAK-----DIFLSLKQKNAVTLNGLIV 349

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL-SSLGDYKSAD-------VVYGL 251
             V+ +   EAV+ F     +G R +     + +  L S+L +Y  ++       VV+G 
Sbjct: 350 GLVRQDFSEEAVKIF-----VGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGH 404

Query: 252 LVKLGSEYVNDLFVASS--AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           +++ G   + DL +A S   + MYA+ G  + A KIF      +   WNT+I    QN +
Sbjct: 405 MLRTG---LTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGN 461

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV-- 367
             EA+ +   ++    I   +   +S+LS+ + L+ L  GQQ+H   +K  + L   V  
Sbjct: 462 CEEAV-MHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSN 520

Query: 368 ------------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFM 408
                              N++ E D VSWNTM+     +      ++ V+  M + G +
Sbjct: 521 VLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLI 580

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQI 467
            + VT   LL+A S L   ++GKQ HA +++HG+  + + ++ LI  YAKSG + +   +
Sbjct: 581 PNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHL 640

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F  N S  RD  +WN+MI+GY  NG L+EA      M+      +  T + +L AC  + 
Sbjct: 641 F-TNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVA 699

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            +E G +LH F IR  L+ +V V ++L+DMYSK G ++YA+ +F  + ++N  ++ +MI 
Sbjct: 700 ALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMIS 759

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GY +HG+  +A+ +F  M      PD +TFV+VLSACS+AGLV+ GL+ F++M  ++ I 
Sbjct: 760 GYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGIL 818

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH---GHSELAEV 704
           P  EHY CV D+LGR GK+ +  E+++ +  E N L IW ++L +CR      + +L   
Sbjct: 819 PQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNAL-IWRTVLVACRQSKDGSNIDLGRE 877

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            ++ LLE++ +N  P  +VL SN +A  G WE+  K R  MR+   +KE G SW+ +   
Sbjct: 878 ASRVLLEIEPQN--PVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDG 935

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V+ F + D+ HP + +IYE L  L   +RNAG
Sbjct: 936 VHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAG 967



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 165/693 (23%), Positives = 321/693 (46%), Gaps = 57/693 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYS 111
            R   A Q+FD +     V W  ++ G+V + +  EA  ++  M ++        ++T+ 
Sbjct: 110 ARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFG 169

Query: 112 SVLKACAETRNLRIGKAVHCHFI--RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++L+AC +    R+G AV  H +  +     +  V N+L++MY +C        VG    
Sbjct: 170 TLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSC-------TVGPPI- 221

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML----RMGIRPS 225
                   L  +VFD    R+++ WN ++S Y K          F+ M     R+ +RP+
Sbjct: 222 --------LAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPT 273

Query: 226 TISFVNVFPALSSLGDYKSA-DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             +F ++  A S      +  D V   ++K G    +DL+V S+ +  +A  G  D A+ 
Sbjct: 274 EHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCS--SDLYVGSALVSAFARHGLTDEAKD 331

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQL 343
           IF +  ++N    N +I G V+ +   EA+++FV      ++  D  V  LSAL+  S  
Sbjct: 332 IFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSIS 391

Query: 344 QE-LDLGQQLHAYIIKN-FVALPVIVLNAVIE--------------------RDVVSWNT 381
           +E L +G+ +H ++++     L + V N ++                      D +SWNT
Sbjct: 392 EEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNT 451

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +ISA  QNG  +E +M    M++      +  + + LS+ + L+    G+Q H   ++ G
Sbjct: 452 IISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWG 511

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-LEEAFV 499
           +  +  + + L+ MY + G +    ++F  N   + D+ +WN M+     +   + E   
Sbjct: 512 LDLDTSVSNVLVKMYGECGAMSDYWKVF--NSMAEHDEVSWNTMMGVMASSQTPISEIVK 569

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F  M+   + PN VT  ++L A +P+  +ELGKQ+H   +++ + ++  V  +LI  Y+
Sbjct: 570 VFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYA 629

Query: 560 KSGVINYAANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           KSG +    ++F  + + ++++++ +MI GY  +G  + A+     M   G   D  TF 
Sbjct: 630 KSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFS 689

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            +L+AC+    ++ G+++     + + ++        + DM  + G+V  A +    + +
Sbjct: 690 IILNACASVAALERGMELHAFGIRSH-LESDVVVESALVDMYSKCGRVDYASKLFNSMTQ 748

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
                  W S++     HG    A  + +++L 
Sbjct: 749 RNEF--SWNSMISGYARHGLGRKAIEIFEEMLR 779



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 214/498 (42%), Gaps = 45/498 (9%)

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++ P L   GD  S + ++  L+K G  +  DLF+ +  +  YA+      A ++FD   
Sbjct: 66  DLLPLLRRGGDANSPENLHVELIKRGLNH--DLFLCNHLVNSYAKGARLAAASQVFDEMP 123

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQ--LQEL 346
           ERN   W  ++ GYV +    EA  +F  +L   +        TF + L A        L
Sbjct: 124 ERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRL 183

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMIS 384
               Q+H  + K   A    V NA+I                       RD+++WN ++S
Sbjct: 184 GFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMS 243

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMID----SVTVTALLS-AASNLRNQDVGKQTHAYLLR 439
            + + G       L  +MQ+    I       T  +L++ A+ +  +  V  Q   ++L+
Sbjct: 244 VYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLK 303

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA- 497
            G   +  + S L+  +A+ GL   A+ IF       ++  T N +I G  +    EEA 
Sbjct: 304 SGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLK--QKNAVTLNGLIVGLVRQDFSEEAV 361

Query: 498 --FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSL 554
             FV  R  ++ N    VV ++++         + +G+ +HG  +R  L D  + V   L
Sbjct: 362 KIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGL 421

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           ++MY+K G I  A+ +F  +   + +++ T+I    Q+G  E A+  +  M+   I P  
Sbjct: 422 VNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSN 481

Query: 615 ITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
              ++ LS+C+   L+  G Q+  D ++    +  S  +   +  M G  G + + ++  
Sbjct: 482 FALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNV--LVKMYGECGAMSDYWKVF 539

Query: 674 KELGEEGNVLEIWGSLLG 691
             + E   V   W +++G
Sbjct: 540 NSMAEHDEV--SWNTMMG 555



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A +LP     G+    + LH   I+  L+ ++F+   L++ Y+K   +  A+ VF ++PE
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSM---KGCGIEPDAITFVAVLSACSYAG 628
           +N+V++T ++ GY  HG++E A  +FR+M      G  P + TF  +L AC   G
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 205/649 (31%), Positives = 343/649 (52%), Gaps = 61/649 (9%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS-SL 239
           ++F  +   N    NT++  Y++     +A+  ++ ML   +     ++  +F + S  L
Sbjct: 81  QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRL 140

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            ++     +   ++K+G  + +D+++ ++ I MYA  G    ARK+FD     +   WN+
Sbjct: 141 AEF-DGKCIQDHVLKVG--FDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNS 197

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+ GYV   +  EA +++ ++ E + I  + +  L              G+       K 
Sbjct: 198 MLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVL-------------FGK-------KG 237

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
            V     + N + ++D+VSW+ +IS + QN + +E L+L  EM   G M+D V V ++LS
Sbjct: 238 NVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLS 297

Query: 420 AASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYA---------------------- 456
           A S L     GK  H  +++ GI  +  +++ LI MY+                      
Sbjct: 298 ACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQIS 357

Query: 457 ---------KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                    K G I+ AR +F+     D+D  +W+AMI+GY Q     E  V F++M   
Sbjct: 358 WNSMISGYVKCGEIEKARALFD--SMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIE 415

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
              P+   + SV+ AC  +  ++ GK +H +  +  L  N+ +GT+LI+MY K G +  A
Sbjct: 416 GTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA 475

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF  + EK   T+  +ILG   +G+ +++L  F  MK  G+ P+ ITFVAVL AC + 
Sbjct: 476 LEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHM 535

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLVDEG + F+ M QE+KI P+ +HY C+ D+LGR G + EA E ++ +    +V   WG
Sbjct: 536 GLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDV-STWG 594

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LLG+C+ +G +E  E + +KL+E+   +   G++VLLSNIYA +GNW +V +VR  MR+
Sbjct: 595 ALLGACKKYGDNETGERIGRKLVELHPDHD--GFNVLLSNIYASKGNWVDVLEVRGMMRQ 652

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            G+ K  GCS I+  G V+ F + D+ HPQ+  I  ML+ +A +++  G
Sbjct: 653 HGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEG 701



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 164/663 (24%), Positives = 295/663 (44%), Gaps = 132/663 (19%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           Q+F  I  P   I NT++ G++  N P +AI +Y  M +S+   + DNYTY  + ++C+ 
Sbjct: 81  QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESN--VAADNYTYPILFQSCSI 138

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
                 GK +  H ++   +   ++ N+L+NMY+ C +  DA                  
Sbjct: 139 RLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDAR----------------- 181

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
            KVFD     ++V+WN++++ YV                                    +
Sbjct: 182 -KVFDGSSVLDMVSWNSMLAGYV-----------------------------------LV 205

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G+ + A  VY  + +       ++  ++S I ++ + G  + A K+F+   +++   W+ 
Sbjct: 206 GNVEEAKDVYDRMPE------RNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSA 259

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +I  Y QN    EA+ LF + +  + I+ D+V  LS LSA S+L  +  G+ +H  ++K 
Sbjct: 260 LISCYEQNEMYEEALILFKE-MNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV 318

Query: 360 FVALPVIVLNAVI----------------------------------------------- 372
            +   V + NA+I                                               
Sbjct: 319 GIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALF 378

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
               ++D VSW+ MIS + Q     E L+L  EMQ +G   D   + +++SA ++L   D
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            GK  HAY+ ++G+     + + LI+MY K G ++ A ++F+  +  ++  +TWNA+I G
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE--EKGVSTWNALILG 496

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQ 546
              NGL++++   F +M EH VTPN +T  +VL AC  MG ++ G +  +     + +  
Sbjct: 497 LAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGP 556

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG----YGQHGMSERALSLF 602
           N+     ++D+  ++G++  A  +   +P    V+    +LG    YG +   ER     
Sbjct: 557 NIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERI---- 612

Query: 603 RSMKGCGIEPDAITFVAVLSA--CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
              K   + PD   F  +LS    S    VD  L++  +M+Q   ++      C + +  
Sbjct: 613 -GRKLVELHPDHDGFNVLLSNIYASKGNWVDV-LEVRGMMRQHGVVKTPG---CSMIEAH 667

Query: 661 GRV 663
           GRV
Sbjct: 668 GRV 670



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 228/497 (45%), Gaps = 62/497 (12%)

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFAR--KIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           S +  D F AS  +    EL   +  +  +IF +    N  + NTM+ GY+Q N P +AI
Sbjct: 52  SGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAI 111

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVS-QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
            ++  +LE   +  D+ T+     + S +L E D G+ +  +++K              +
Sbjct: 112 WVYKFMLE-SNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLK-----------VGFD 158

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
            DV   NT+I+ +   G     L    ++     ++D V+  ++L+    + N +  K  
Sbjct: 159 SDVYIQNTLINMYAVCG----NLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDV 214

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           +  +    +      + +I ++ K G ++ A ++F  N+   +D  +W+A+I+ Y QN +
Sbjct: 215 YDRMPERNVI---ASNSMIVLFGKKGNVEEACKLF--NEMKQKDLVSWSALISCYEQNEM 269

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA + F++M  + +  + V + SVL AC+ +  +  GK +HG  ++  ++  V +  +
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNA 329

Query: 554 LIDMYS-------------------------------KSGVINYAANVFAKIPEKNSVTY 582
           LI MYS                               K G I  A  +F  +P+K++V++
Sbjct: 330 LIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSW 389

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           + MI GY Q       L LF+ M+  G +PD    V+V+SAC++   +D+G  I   +++
Sbjct: 390 SAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK 449

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
              ++ +      + +M  ++G V +A E  K L E+G  +  W +L+    ++G   L 
Sbjct: 450 N-GLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKG--VSTWNALILGLAMNG---LV 503

Query: 703 EVVAKKLLEMDTRNSMP 719
           +   K   EM      P
Sbjct: 504 DKSLKTFSEMKEHGVTP 520



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/422 (22%), Positives = 187/422 (44%), Gaps = 31/422 (7%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           ++G    A +LF+ + +   V W+ +I  +  N +  EA++L+ +M  +      D    
Sbjct: 235 KKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMV--DEVVV 292

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            SVL AC+    +  GK VH   ++        + N+L++MYS+C   + A+ +  +   
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC 352

Query: 171 VD----------YSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
           +D          Y K   + K   +FD+M  ++ V+W+ ++S Y + +R+ E +  F+ M
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
              G +P     V+V  A + L        ++  + K G +   ++ + ++ I MY +LG
Sbjct: 413 QIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKI--NIILGTTLINMYMKLG 470

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
           C + A ++F    E+    WN +I G   N    ++++ F ++ E   +  +++TF++ L
Sbjct: 471 CVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKE-HGVTPNEITFVAVL 529

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
            A   +  +D G +    +I+     P          ++  +  M+    + G+  E   
Sbjct: 530 GACRHMGLVDEGHRHFNSMIQEHKIGP----------NIKHYGCMVDLLGRAGMLKEAEE 579

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L+  M       D  T  ALL A     + + G++    L+      +G    L ++YA 
Sbjct: 580 LIESMP---MAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYAS 636

Query: 458 SG 459
            G
Sbjct: 637 KG 638



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 20/197 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + G    AR LFDS+     V W+ +I G+   +   E ++L+ +M+     T
Sbjct: 360 SMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG--T 417

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D     SV+ AC     L  GK +H +  +     +  +  +L+NMY       DA  
Sbjct: 418 KPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDA-- 475

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VF  +  + V  WN ++          ++++ F  M   G+ 
Sbjct: 476 ----------------LEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVT 519

Query: 224 PSTISFVNVFPALSSLG 240
           P+ I+FV V  A   +G
Sbjct: 520 PNEITFVAVLGACRHMG 536


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 222/734 (30%), Positives = 369/734 (50%), Gaps = 60/734 (8%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD-- 106
           + + GR   A ++F      + V WN  + G V N     A+ ++  M     + SC+  
Sbjct: 114 LAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV----WGSCEPN 169

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           ++TYS  L ACA    L +G+AVH   +R       FV  SL+NMY+ C   + A M   
Sbjct: 170 SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC-GDMGAAM--- 225

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         + F  M  RNVV+W T ++ +V+ +  V A+   R M+R G+  + 
Sbjct: 226 --------------REFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 271

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  ++  A + +   + A  ++G+++K  +E   D  V  + I  Y   G  + + K+F
Sbjct: 272 YTATSILLACAQMSMVREASQIHGMVLK--TEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 287 DNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           +      N  +W+  I G V N+  + +++L  ++     +  +D  + S  S+V+ ++ 
Sbjct: 330 EEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFH-QGLRPNDKCYASVFSSVNSIE- 386

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
              G QLH+  IK      ++V +A+                     ERD VSW  M++ 
Sbjct: 387 --FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 444

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  +G   E  +    M   GF  D V++TA+LSA +       GK+ H + LR      
Sbjct: 445 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETT 504

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +    I MY+K   ++TAR+IF+      +DQ  W++MI+GY  NG  EEA   F+ M+
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPC--KDQVMWSSMISGYATNGCGEEAISLFQLMV 562

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             ++  +    +S+L  C  +      K LHG++I+  +  +  V +SL+ +YS+SG ++
Sbjct: 563 AASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMD 622

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF +I   + V +TT+I GY QHG S+ AL++F  M   G+ PD +  V+VLSACS
Sbjct: 623 DSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 682

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
             GLV++G   F+ M+  Y ++P  +HYCC+ D+LGR G++ EA  FV  +  + +++ +
Sbjct: 683 RNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM-V 741

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +L+ +CR+H  + L   V  K+ E    N   G    LSNI A  G+WE V ++RK M
Sbjct: 742 WSTLVAACRVHDDTVLGRFVENKIRE---GNYDSGSFATLSNILANSGDWEEVARIRKTM 798

Query: 746 RERGLRKEVGCSWI 759
             +G+ KE G S +
Sbjct: 799 --KGVNKEPGWSMV 810



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 281/636 (44%), Gaps = 78/636 (12%)

Query: 12  PPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTV 71
           PP    +  P   P + +LS   P+               EG PHL   +     RP   
Sbjct: 2   PPRLLRSSTPLAAPHLRALSAFAPR-------------AGEGAPHLFGGM-----RPRAP 43

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
                    +   LP E +             S   ++Y + L ACA      + + V+C
Sbjct: 44  D--------LLARLPAELVSFARARAAGRAAPS--QFSYGNALAACARAPAPALAEQVYC 93

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
              +   + + +V   ++++ +      DA                   +VF      + 
Sbjct: 94  AAWKDGLSGNAYVCTGMVDLLAKSGRLRDA------------------LRVFADGDPSSA 135

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V WN  VS  V+      AV  FR M+     P++ ++     A ++  +      V+GL
Sbjct: 136 VCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGL 195

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           +++   EY  D+FV +S + MYA+ G    A + F     RN   W T I G+VQ++ PV
Sbjct: 196 VLRRDPEY--DVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPV 253

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            A+ L  +++  + +  +  T  S L A +Q+  +    Q+H  ++K  + L  +V  A+
Sbjct: 254 SAMLLLREMVR-NGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEAL 312

Query: 372 I-----------------ERDVVSWNTMISAFVQNGLDDEGLM----LVYEMQKQGFMID 410
           I                 E   VS  ++ SAF+ +G+ +  L+    L+  M  QG   +
Sbjct: 313 ISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFI-SGVSNHSLLRSVQLLRRMFHQGLRPN 371

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFE 469
                ++ S+ +++   + G Q H+  ++ G IH   + S L  MY++   ++ + ++FE
Sbjct: 372 DKCYASVFSSVNSI---EFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFE 428

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           +    +RD  +W AM+AG+  +G   EAF+ FR M+     P+ V++ ++L ACN    +
Sbjct: 429 EMQ--ERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECL 486

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             GK++HG ++R +  +  F+    I MYSK   +  A  +F   P K+ V +++MI GY
Sbjct: 487 LKGKEVHGHTLR-VYGETTFINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGY 545

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             +G  E A+SLF+ M    I  D+    ++LS C+
Sbjct: 546 ATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCA 581



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 209/434 (48%), Gaps = 29/434 (6%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS  S+ N   A +       A+ VY    K G     + +V +  + + A+ G    A 
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDG--LSGNAYVCTGMVDLLAKSGRLRDAL 124

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F +    +   WN  + G V+N     A+E+F  ++       +  T+  ALSA +  
Sbjct: 125 RVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSFTYSGALSACAAG 183

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
           +EL +G+ +H  +++      V V  +++                     R+VVSW T I
Sbjct: 184 EELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAI 243

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + FVQ+      ++L+ EM + G  I+  T T++L A + +       Q H  +L+  ++
Sbjct: 244 AGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMY 303

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  ++  LI  Y   G I+ + ++FE+  +   +++ W+A I+G + + LL    +  R
Sbjct: 304 LDCVVKEALISTYTNFGFIELSEKVFEEAGTVS-NRSIWSAFISGVSNHSLLRSVQL-LR 361

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M    + PN    ASV  + N   +IE G QLH  +I+      + VG++L  MYS+  
Sbjct: 362 RMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCD 418

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  +  VF ++ E++ V++T M+ G+  HG S  A   FR+M   G +PD ++  A+LS
Sbjct: 419 NVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILS 478

Query: 623 ACSYAGLVDEGLQI 636
           AC+ +  + +G ++
Sbjct: 479 ACNRSECLLKGKEV 492


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 217/703 (30%), Positives = 356/703 (50%), Gaps = 57/703 (8%)

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
           ++NL   K+ H   I    +  +FV   L+  YS  L SL+A            ++Y   
Sbjct: 42  SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSD-LRSLEA------------ARY--- 85

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             VFD   +   +  N ++  Y+++ RY E +  F +M    +   + S      A +S 
Sbjct: 86  --VFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASS 143

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            DY+    +    V+ G E   + FV SS I    + G    A+++FD    ++   WN+
Sbjct: 144 LDYEMGMEIISSAVEKGME--KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNS 201

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +IGGYVQ      A +LF + +    I    +T  S + A   +  L LG+ +H Y++  
Sbjct: 202 IIGGYVQAGCFDVAFQLFFE-MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL 260

Query: 360 FVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
            +   ++VL + ++                    R++VSWN MIS  V+NGL  E   L 
Sbjct: 261 GLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLF 320

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYA 456
           + + +     D  T+ +LL   S   +   GK  H   +R    FE    + + ++D+Y+
Sbjct: 321 HRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS---FESNLILSTAIVDLYS 377

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G +K A  +F  N   DR+  TW AM+ G  QNG  E+A   F QM E  +  N VT 
Sbjct: 378 KCGSLKQATFVF--NRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTF 435

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP- 575
            S++ +C  +G+++ G+ +HG   R     ++   T+L+DMY+K G IN A  +F+    
Sbjct: 436 VSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            K+ V + +MI GYG HG   +A+ ++  M   G++P+  TF+++LSACS++ LV++G+ 
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGIS 555

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN--VLEIWGSLLGSC 693
           +F+ M++++ I+P  +HY C+ D+L R G+  EA   ++++  +    VLE   +LL  C
Sbjct: 556 LFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLE---ALLSGC 612

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R H +  L    + KLL +D  N  PG +++LSNIYAE   W+ VD +R  MR RGL+K 
Sbjct: 613 RTHKNINLGIQTSDKLLALDAMN--PGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKT 670

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            G S ++ G +V+ F + D  HP   +IY  LE L   +  +G
Sbjct: 671 PGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSG 713



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 259/542 (47%), Gaps = 51/542 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD   +P  ++ N ++ G++ +    E + L+  M+  S     D+ + +  LKAC
Sbjct: 83  ARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR--SRNLEVDSCSCTFALKAC 140

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A + +  +G  +    +      +RFV +S+++                    V + K  
Sbjct: 141 ASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFL------------------VKFGKIG 182

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  ++VV WN+I+  YV+   +  A + F  M   GI+PS I+  ++  A  
Sbjct: 183 EAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACG 242

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +G+ K    ++G ++ LG    ND+ V +S + MY+++G  + AR +F     RN   W
Sbjct: 243 GIGNLKLGKCMHGYVLGLG--LGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSW 300

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G V+N    E+ +LF +++      FD  T +S L   SQ   L  G+ LH   I
Sbjct: 301 NAMISGCVRNGLVGESFDLFHRLVR-SSGGFDLTTIVSLLQGCSQTASLATGKILHGCAI 359

Query: 358 KNF-------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
           ++F                   +     V N + +R+V++W  M+    QNG  ++ L L
Sbjct: 360 RSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRL 419

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAK 457
             +MQ++G   +SVT  +L+ + ++L +   G+  H +L R G  F+ +  + L+DMYAK
Sbjct: 420 FAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAK 479

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I  A +IF  + S  +D   WN+MI GY  +G   +A   + +M+E  + PN  T  
Sbjct: 480 CGKINLAERIFS-HGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFL 538

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV----GTSLIDMYSKSGVINYAANVFAK 573
           S+L AC+    +E G  L     R   D N+         L+D+ S++G    A  +  K
Sbjct: 539 SLLSACSHSRLVEQGISLFNSMER---DHNIRPIEKHYACLVDLLSRAGRFEEAQALIEK 595

Query: 574 IP 575
           +P
Sbjct: 596 MP 597



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 213/450 (47%), Gaps = 47/450 (10%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S + + G+   A+++FD +     V WN+II G+V       A  L+ +M  S    
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S    T +S+++AC    NL++GK +H + +         V  S ++MYS          
Sbjct: 230 S--PITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYS---------- 277

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K  +++ +++     VF  M  RN+V+WN ++S  V+     E+   F  ++R    
Sbjct: 278 ---KMGDIESARW-----VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGG 329

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
               + V++    S      +  +++G  ++    + ++L ++++ + +Y++ G    A 
Sbjct: 330 FDLTTIVSLLQGCSQTASLATGKILHGCAIR---SFESNLILSTAIVDLYSKCGSLKQAT 386

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +F+   +RN   W  M+ G  QN H  +A+ LF Q+ E + I  + VTF+S + + + L
Sbjct: 387 FVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQE-EGIAANSVTFVSLVHSCAHL 445

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTM 382
             L  G+ +H ++ +   A  ++ + A+++                     +DVV WN+M
Sbjct: 446 GSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSM 505

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HG 441
           I+ +  +G   + + + ++M ++G   +  T  +LLSA S+ R  + G      + R H 
Sbjct: 506 ITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHN 565

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEK 470
           I   E   + L+D+ +++G  + A+ + EK
Sbjct: 566 IRPIEKHYACLVDLLSRAGRFEEAQALIEK 595


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 193/613 (31%), Positives = 326/613 (53%), Gaps = 40/613 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           MLR  + P+  +F     A S+L D+     ++   +  G +   DLFV+++ + MY + 
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ--ADLFVSTALLDMYVKC 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI-ELFVQVLELDEIVFDDVTFLS 335
            C   A  IF     R+   WN M+ GY  +     A+  L    +++  +  +  T ++
Sbjct: 59  ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 336 ALSAVSQLQELDLGQQLHAYIIK--------------NFVALPVIVLN------------ 369
            L  ++Q   L  G  +HAY I+              + V L   +L+            
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 370 ----AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-MIDSVTVTALLSAASNL 424
               A+  R+ V+W+ +I  FV      +  +L   M  QG   +   ++ + L A ++L
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +  +G+Q HA L + G+H +    + L+ MYAK+GLI  A  +F+  +   +D  +++A
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD--EMAVKDTVSYSA 296

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +++GY QNG  EEAF+ F++M   NV P+  T+ S++PAC+ +  ++ G+  HG  I   
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L     +  +LIDMY+K G I+ +  VF  +P ++ V++ TMI GYG HG+ + A +LF 
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G  PD +TF+ +LSACS++GLV EG   F +M   Y + P  EHY C+ D+L R 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G + EAYEF++ +    +V  +W +LLG+CR++ + +L + V++ + E+    +  G  V
Sbjct: 477 GFLDEAYEFIQSMPLRADV-RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT--GNFV 533

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIY+  G ++   +VR   + +G +K  GCSWI++ G ++ F   DQ HPQS +IY 
Sbjct: 534 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 593

Query: 784 MLERLAMEMRNAG 796
            L+ + + ++  G
Sbjct: 594 ELDNILVGIKKLG 606



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 241/519 (46%), Gaps = 60/519 (11%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +NYT+   LKAC+   +   G+A+H H I        FV  +LL+MY  C    DA    
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMG-IR 223
                           +F TM  R++VAWN +++ Y     Y  AV     M ++M  +R
Sbjct: 66  ---------------HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLR 110

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKL--------GSEYVNDLFVASSAIFMYAE 275
           P+  + V + P L+  G       V+   ++          S+  + + + ++ + MYA+
Sbjct: 111 PNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAK 170

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G   +AR++FD    RN   W+ +IGG+V  +   +A  LF  +L          +  S
Sbjct: 171 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 230

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RD 375
           AL A + L  L +G+QLHA + K+ V   +   N+++                     +D
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 290

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VS++ ++S +VQNG  +E  ++  +MQ      D+ T+ +L+ A S+L     G+ +H 
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            ++  G+  E  + + LIDMYAK G I  +RQ+F    S  RD  +WN MIAGY  +GL 
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLG 408

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVF 549
           +EA   F +M      P+ VT   +L AC+  G +  GK       HG+ +   ++  + 
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI- 467

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
               ++D+ S+ G ++ A      +P +  V     +LG
Sbjct: 468 ---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 232/553 (41%), Gaps = 105/553 (18%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL----LYSQMKKSSPYTSCDNYTYSSV 113
           A  +F ++     V WN ++ G+  + + + A+     +  QM +  P  S    T  ++
Sbjct: 64  AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS----TLVAL 119

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSR----------FVYNSLLNMYSTCLSSLDAEM 163
           L   A+   L  G +VH + IR   +P+R           +  +LL+MY+ C S L A  
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR- 178

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-- 221
                            +VFD M  RN V W+ ++  +V   R  +A   F+ ML  G  
Sbjct: 179 -----------------RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 221

Query: 222 -IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            + P++I+  +   A +SL   +  + ++ LL K G     DL   +S + MYA+ G  D
Sbjct: 222 FLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVH--ADLTAGNSLLSMYAKAGLID 277

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A  +FD    ++T  ++ ++ GYVQN    EA  +F + ++   +  D  T +S + A 
Sbjct: 278 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF-KKMQACNVEPDAATMVSLIPAC 336

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S L  L  G+  H  +I   +A    + NA+I+                    RD+VSWN
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           TMI+ +  +GL  E   L  EM   GF  D VT   LLSA S+                 
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH----------------- 439

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSG---DRDQATWNAMIAGYTQNGLLEEA 497
                            SGL+   +  F     G         +  M+   ++ G L+EA
Sbjct: 440 -----------------SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           +   + M    +  +V    ++L AC    NI+LGK++    I+ L  +       L ++
Sbjct: 483 YEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRM-IQELGPEGTGNFVLLSNI 538

Query: 558 YSKSGVINYAANV 570
           YS +G  + AA V
Sbjct: 539 YSAAGRFDEAAEV 551



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 22/198 (11%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + G    A  LFD +    TV ++ ++ G+V N    EA L++ +M+  +   
Sbjct: 265 SLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN--V 322

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
             D  T  S++ AC+    L+ G+  H    IR  ++ +  + N+L++MY+ C       
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS-ICNALIDMYAKC------- 374

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                       + DL  +VF+ M  R++V+WNT+++ Y       EA   F  M  +G 
Sbjct: 375 -----------GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423

Query: 223 RPSTISFVNVFPALSSLG 240
            P  ++F+ +  A S  G
Sbjct: 424 PPDGVTFICLLSACSHSG 441


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 198/659 (30%), Positives = 344/659 (52%), Gaps = 60/659 (9%)

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
           ++ +DY++     ++F+ +   N   WN ++  Y++T     A   ++ ML   +     
Sbjct: 25  FIHIDYTR-----RIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNY 79

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  +  A S       A  V+  ++KLG  + +D++V ++ I  ++       A ++F+
Sbjct: 80  TYPLLIQACSIRRSEWEAKQVHNHVLKLG--FDSDVYVRNTLINCFSVCSNMTDACRVFN 137

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                ++  WN+++ GY++  +  EA  ++ Q+ E   I  + +  L             
Sbjct: 138 ESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVL------------- 184

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                  + ++  V     + + ++E+D+V+W+ +I+ F QN + +E +     M K G 
Sbjct: 185 -------FGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 237

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQ 466
           M+D V   + LSA +NL   ++GK  H+  L+ G   +  +++ LI MY+K G I  AR+
Sbjct: 238 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297

Query: 467 IFEK-----------------------------NDSGDRDQATWNAMIAGYTQNGLLEEA 497
           +F++                             +   ++D  +W++MI+GY QN L +E 
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 357

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F++M      P+  T+ SV+ AC  +  +E GK +H +  R  L  NV +GT+LIDM
Sbjct: 358 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 417

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y K G +  A  VF  + EK   T+  +ILG   +G+ E +L +F +MK C + P+ ITF
Sbjct: 418 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF 477

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           + VL AC + GLVDEG   F  M  ++KIQP+ +HY C+ D+LGR GK+ EA E +  + 
Sbjct: 478 MGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMP 537

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
              +V   WG+LLG+C+ HG SE+   V +KL+E+   +   G+HVLLSNIYA +G W++
Sbjct: 538 MTPDV-ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHD--GFHVLLSNIYASKGKWDD 594

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V ++R  M +  + K  GCS I+  G ++ F + D+ HP    I +ML  +AM+++  G
Sbjct: 595 VLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEG 653



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 172/641 (26%), Positives = 289/641 (45%), Gaps = 123/641 (19%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++F+ I      +WN +I  ++  N P+ A  LY  M   S Y   DNYTY  +++AC+
Sbjct: 32  RRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSML--SNYLGADNYTYPLLIQACS 89

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             R+    K VH H ++   +   +V N+L+N +S C +  DA                 
Sbjct: 90  IRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDA----------------- 132

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
            C+VF+     + V+WN+I++ Y++     EA   +  M                P  S 
Sbjct: 133 -CRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM----------------PERS- 174

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
                                   +  ++S I ++   G    A K+FD  LE++   W+
Sbjct: 175 ------------------------IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWS 210

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA---- 354
            +I  + QN    EAI  FV + ++  +V D+V  +SALSA + L  +++G+ +H+    
Sbjct: 211 ALIACFQQNEMYEEAIRTFVGMHKIGVMV-DEVVAVSALSACANLLVVNMGKLIHSLSLK 269

Query: 355 -----------------------------------------------YIIKNFVALPVIV 367
                                                          Y+  N V     +
Sbjct: 270 IGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAI 329

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
            +++ E+DVVSW++MIS + QN L DE L L  EMQ  GF  D  T+ +++SA + L   
Sbjct: 330 FDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAAL 389

Query: 428 DVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           + GK  HAY+ R+G+     + + LIDMY K G ++TA ++F      ++  +TWNA+I 
Sbjct: 390 EQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY--GMIEKGISTWNALIL 447

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI--RYLL 544
           G   NGL+E +   F  M + +VTPN +T   VL AC  MG ++ G Q H +S+   + +
Sbjct: 448 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHHFYSMIHDHKI 506

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFR 603
             NV     ++D+  ++G +  A  +  ++P    V T+  ++    +HG SE    + R
Sbjct: 507 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGR 566

Query: 604 SMKGCGIEPDAITFVAVLSAC-SYAGLVDEGLQIFDLMQQE 643
            +    ++PD   F  +LS   +  G  D+ L+I  +M + 
Sbjct: 567 KL--IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 605



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 31/415 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +     V W+ +I  F  N +  EAI  +  M K       D     S L AC
Sbjct: 194 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV--DEVVAVSALSAC 251

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA----------EMVGLK 167
           A    + +GK +H   ++  +     + N+L+ MYS C   + A          +++   
Sbjct: 252 ANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWN 311

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            +   Y K +LV     +FD+M  ++VV+W++++S Y + + + E +  F+ M   G +P
Sbjct: 312 SMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKP 371

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
              + V+V  A + L   +    V+  + + G     ++ + ++ I MY + GC + A +
Sbjct: 372 DETTLVSVISACARLAALEQGKWVHAYIKRNG--LTINVILGTTLIDMYMKCGCVETALE 429

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +F   +E+    WN +I G   N     ++++F  + +   +  +++TF+  L A   + 
Sbjct: 430 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC-HVTPNEITFMGVLGACRHMG 488

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            +D GQ  H Y          ++ +  I+ +V  +  M+    + G   E   L+  M  
Sbjct: 489 LVDEGQH-HFY---------SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 538

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
                D  T  ALL A     + ++G++    L+      +G    L ++YA  G
Sbjct: 539 TP---DVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKG 590


>gi|297810965|ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319203|gb|EFH49625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 220/814 (27%), Positives = 399/814 (49%), Gaps = 101/814 (12%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK- 97
           T   +S L+   +  R    +++F  +     V+WN ++ G   +    E +  +  M  
Sbjct: 56  TEVSKSVLNMYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSVS-CGRETMRFFKAMHF 114

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
              P  S  + T++ +L  C    +   GK++H + I+        V N+L++MY+    
Sbjct: 115 ADEPKPS--SVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAK--- 169

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                     Y+  D          FD +  ++VV+WN I++ + + +   +A R F +M
Sbjct: 170 --------FGYIIPD------AFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLM 215

Query: 218 LRMGIRPSTISFVNVFPALSSLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           L+    P+  +  NV P  +S+G    Y+S   ++  +V+  S     +FV +S +  Y 
Sbjct: 216 LKEPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQ-RSWLQTHVFVCNSLVSFYL 274

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
            +G  + A  +F     ++   WN +I GY  N+  ++A++LF  +++  ++  D VT L
Sbjct: 275 RVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTIL 334

Query: 335 SALSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVIE-------------------- 373
           S L   +QL +L  G+++H+YI+++ ++     V NA+I                     
Sbjct: 335 SILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSM 394

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D++SWN ++ AF  +    + L L++ +  +   +DSVT+ +LL   +N++     K+ 
Sbjct: 395 KDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEV 454

Query: 434 HAYLLRHGI-HFE---GMESYLIDMYAKSGLIKTARQIFEK-----------------ND 472
           H Y ++ G+ H E    + + L+D YAK G ++ A +IF+                   +
Sbjct: 455 HGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVN 514

Query: 473 SGDRDQA-------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           SG  D A             TW+ M+  Y ++    EA   FR++    + PN VTI ++
Sbjct: 515 SGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNL 574

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           LP C  + ++ L +Q HG+ IR  L      GT L+D+Y+K G + +A +VF     ++ 
Sbjct: 575 LPVCAQLASLHLVRQCHGYIIRGRLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDL 633

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V +T M+ GY  HG  + AL +F  M    I+PD                  +GLQI+D 
Sbjct: 634 VMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPD-----------------HDGLQIYDS 676

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           ++  + ++P+ E Y C  D+L R G++ +AY F+ ++  E N   IWG+LL +C  +   
Sbjct: 677 IRAVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNA-NIWGTLLRACTTYNRM 735

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L   VA  LL+ ++  +  G HVL+SN+YA +  WE V ++R  M+++ ++K  GCSW+
Sbjct: 736 DLGHSVANHLLQAESDET--GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWL 793

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           +V G  + F S D  HP+   I++++  L ++M+
Sbjct: 794 EVDGKRDVFVSGDCSHPRRDSIFDLVNALYLQMK 827



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 143/578 (24%), Positives = 262/578 (45%), Gaps = 62/578 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  +  V+KACA    L  G+A+H    +        V  S+LNMY+ C    D +   
Sbjct: 20  DHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQ--- 76

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY-VKTERYVEAVRQFRMM-LRMGIR 223
                          K+F  M   + V WN +++   V   R  E +R F+ M      +
Sbjct: 77  ---------------KMFRQMDSVDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPK 119

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFDFA 282
           PS+++F  + P    LGD  +   ++  ++K G E   D  V ++ + MYA+ G     A
Sbjct: 120 PSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLE--KDTLVGNALVSMYAKFGYIIPDA 177

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVT-FLSALSAV 340
              FD+  +++   WN +I G+ +N    +A   F  +L E  E  +  +   L   +++
Sbjct: 178 FTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237

Query: 341 SQLQELDLGQQLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSW 379
            +      G+Q+H+Y++ ++++   V V N+++                     +D+VSW
Sbjct: 238 GKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297

Query: 380 NTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           N +I+ +  N    + L L + + QK    +D VT+ ++L   + L +   GK+ H+Y+L
Sbjct: 298 NVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTILSILPVCAQLTDLTCGKEIHSYIL 357

Query: 439 RHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           RH    E   + + LI  YA+ G    A   F       +D  +WNA++  +  +    +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSM--KDIISWNAILDAFADSPKQFQ 415

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV---FVGTS 553
                  +    +T + VTI S+L  C  +  I   K++HG+S++  L  N     +G +
Sbjct: 416 FLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGNA 475

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           L+D Y+K G + YA  +F  + E+ + VTY +++ GY   G  + A  LF  M       
Sbjct: 476 LLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMS----TT 531

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
           D  T+  ++   + +   +E + +F  +Q    ++P+T
Sbjct: 532 DLTTWSLMVRIYAESCFPNEAIGVFREIQAR-GMRPNT 568


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 223/734 (30%), Positives = 369/734 (50%), Gaps = 60/734 (8%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD-- 106
           + + GR   A ++F      + V WN  + G V N     A+ ++  M     + SC+  
Sbjct: 5   LAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDM----VWGSCEPN 60

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           ++TYS  L ACA    L +G+AVH   +R       FV  SL+NMY+ C   + A M   
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKC-GDMGAAM--- 116

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         + F  M  RNVV+W T ++ +V+ +  V A+   R M+R G+  + 
Sbjct: 117 --------------REFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINK 162

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  ++  A + +   + A  ++G+++K  +E   D  V  + I  Y   G  + + K+F
Sbjct: 163 YTATSILLACAQMSMVREASQIHGMVLK--TEMYLDCVVKEALISTYTNFGFIELSEKVF 220

Query: 287 DNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           +      N  +W+  I G V N+  + +++L  ++     +  +D  + S  S+V+ ++ 
Sbjct: 221 EEAGTVSNRSIWSAFISG-VSNHSLLRSVQLLRRMFH-QGLRPNDKCYASVFSSVNSIE- 277

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
              G QLH+  IK      ++V +A+                     ERD VSW  M++ 
Sbjct: 278 --FGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAG 335

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F  +G   E  +    M   GF  D V++TA+LSA +       GK+ H + LR      
Sbjct: 336 FATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETT 395

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +    I MY+K   ++TAR+IF+      +DQ  W++MI+GY  NG  EEA   F+ M+
Sbjct: 396 FINDCFISMYSKCQGVQTARRIFDATPR--KDQVMWSSMISGYATNGCGEEAISLFQLMV 453

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             ++  +    +S+L  C  +      K LHG++I+  +  +  V +SL+ +YS+SG ++
Sbjct: 454 AASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMD 513

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            +  VF +I   + V +TT+I GY QHG S+ AL++F  M   G+ PD +  V+VLSACS
Sbjct: 514 DSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACS 573

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
             GLV++G   F+ M+  Y ++P  +HYCC+ D+LGR G++ EA  FV  +  + +++ +
Sbjct: 574 RNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLM-V 632

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LL +CR+H  + L   V  K+ E    N   G    LSNI A  G+WE V ++RK M
Sbjct: 633 WSTLLAACRVHDDTVLGRFVENKIRE---GNYDSGSFATLSNILANSGDWEEVARIRKTM 689

Query: 746 RERGLRKEVGCSWI 759
             +G+ KE G S +
Sbjct: 690 --KGVNKEPGWSMV 701



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 185/375 (49%), Gaps = 27/375 (7%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           + A+ G    A ++F +    +   WN  + G V+N     A+E+F  ++       +  
Sbjct: 4   LLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV-WGSCEPNSF 62

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------ 373
           T+  ALSA +  +EL +G+ +H  +++      V V  +++                   
Sbjct: 63  TYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRM 122

Query: 374 --RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             R+VVSW T I+ FVQ+      ++L+ EM + G  I+  T T++L A + +       
Sbjct: 123 PVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREAS 182

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q H  +L+  ++ +  ++  LI  Y   G I+ + ++FE+  +   +++ W+A I+G + 
Sbjct: 183 QIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVS-NRSIWSAFISGVSN 241

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           + LL    +  R+M    + PN    ASV  + N   +IE G QLH  +I+      + V
Sbjct: 242 HSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVN---SIEFGGQLHSSAIKEGFIHGILV 297

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           G++L  MYS+   +  +  VF ++ E++ V++T M+ G+  HG S  A   FR+M   G 
Sbjct: 298 GSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGF 357

Query: 611 EPDAITFVAVLSACS 625
           +PD ++  A+LSAC+
Sbjct: 358 KPDHVSLTAILSACN 372



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 158/344 (45%), Gaps = 27/344 (7%)

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           ++D+ AKSG ++ A ++F   D        WNA ++G  +NG    A   FR M+  +  
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPS--SAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCE 58

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           PN  T +  L AC     + +G+ +HG  +R   + +VFVGTSL++MY+K G +  A   
Sbjct: 59  PNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMRE 118

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F ++P +N V++TT I G+ Q      A+ L R M   G+  +  T  ++L AC+   +V
Sbjct: 119 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 178

Query: 631 DEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYEFVKELGEEGNVL---EI 685
            E  QI  ++ +       TE Y  C V + L          E  +++ EE   +    I
Sbjct: 179 REASQIHGMVLK-------TEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI 231

Query: 686 WGSLLGSCRLHGHSELAEV-VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           W + +    +  HS L  V + +++     R +   Y  + S++ + E   +      KE
Sbjct: 232 WSAFISG--VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKE 289

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY-EMLER 787
               G         I VG  ++   S+      S+K++ EM ER
Sbjct: 290 GFIHG---------ILVGSALSTMYSRCDNVQDSYKVFEEMQER 324


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 193/613 (31%), Positives = 326/613 (53%), Gaps = 40/613 (6%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           MLR  + P+  +F     A S+L D+     ++   +  G +   DLFV+++ + MY + 
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQ--ADLFVSTALLDMYVKC 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI-ELFVQVLELDEIVFDDVTFLS 335
            C   A  IF     R+   WN M+ GY  +     A+  L    +++  +  +  T ++
Sbjct: 59  ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 336 ALSAVSQLQELDLGQQLHAYIIK--------------NFVALPVIVLN------------ 369
            L  ++Q   L  G  +HAY I+              + V L   +L+            
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 178

Query: 370 ----AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-MIDSVTVTALLSAASNL 424
               A+  R+ V+W+ +I  FV      +  +L   M  QG   +   ++ + L A ++L
Sbjct: 179 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASL 238

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +  +G+Q HA L + G+H +    + L+ MYAK+GLI  A  +F+  +   +D  +++A
Sbjct: 239 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFD--EMAVKDTVSYSA 296

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +++GY QNG  EEAF+ F++M   NV P+  T+ S++PAC+ +  ++ G+  HG  I   
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRG 356

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L     +  +LIDMY+K G I+ +  VF  +P ++ V++ TMI GYG HG+ + A +LF 
Sbjct: 357 LASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFL 416

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G  PD +TF+ +LSACS++GLV EG   F +M   Y + P  EHY C+ D+L R 
Sbjct: 417 EMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRG 476

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G + EAYEF++ +    +V  +W +LLG+CR++ + +L + V++ + E+    +  G  V
Sbjct: 477 GFLDEAYEFIQSMPLRADV-RVWVALLGACRVYKNIDLGKKVSRMIQELGPEGT--GNFV 533

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIY+  G ++   +VR   + +G +K  GCSWI++ G ++ F   DQ HPQS +IY 
Sbjct: 534 LLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYR 593

Query: 784 MLERLAMEMRNAG 796
            L+ + + ++  G
Sbjct: 594 ELDNILVGIKKLG 606



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 241/519 (46%), Gaps = 60/519 (11%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +NYT+   LKAC+   +   G+A+H H I        FV  +LL+MY  C    DA    
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMG-IR 223
                           +F TM  R++VAWN +++ Y     Y  AV     M ++M  +R
Sbjct: 66  ---------------HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLR 110

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKL--------GSEYVNDLFVASSAIFMYAE 275
           P+  + V + P L+  G       V+   ++          S+  + + + ++ + MYA+
Sbjct: 111 PNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAK 170

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G   +AR++FD    RN   W+ +IGG+V  +   +A  LF  +L          +  S
Sbjct: 171 CGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 230

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RD 375
           AL A + L  L +G+QLHA + K+ V   +   N+++                     +D
Sbjct: 231 ALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD 290

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VS++ ++S +VQNG  +E  ++  +MQ      D+ T+ +L+ A S+L     G+ +H 
Sbjct: 291 TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHG 350

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
            ++  G+  E  + + LIDMYAK G I  +RQ+F    S  RD  +WN MIAGY  +GL 
Sbjct: 351 SVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPS--RDIVSWNTMIAGYGIHGLG 408

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-----HGFSIRYLLDQNVF 549
           +EA   F +M      P+ VT   +L AC+  G +  GK       HG+ +   ++  + 
Sbjct: 409 KEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI- 467

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
               ++D+ S+ G ++ A      +P +  V     +LG
Sbjct: 468 ---CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 232/553 (41%), Gaps = 105/553 (18%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL----LYSQMKKSSPYTSCDNYTYSSV 113
           A  +F ++     V WN ++ G+  + + + A+     +  QM +  P  S    T  ++
Sbjct: 64  AAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAS----TLVAL 119

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSR----------FVYNSLLNMYSTCLSSLDAEM 163
           L   A+   L  G +VH + IR   +P+R           +  +LL+MY+ C S L A  
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR- 178

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-- 221
                            +VFD M  RN V W+ ++  +V   R  +A   F+ ML  G  
Sbjct: 179 -----------------RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLC 221

Query: 222 -IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            + P++I+  +   A +SL   +  + ++ LL K G     DL   +S + MYA+ G  D
Sbjct: 222 FLSPTSIA--SALRACASLDHLRMGEQLHALLAKSGVH--ADLTAGNSLLSMYAKAGLID 277

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            A  +FD    ++T  ++ ++ GYVQN    EA  +F + ++   +  D  T +S + A 
Sbjct: 278 QAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF-KKMQACNVEPDAATMVSLIPAC 336

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S L  L  G+  H  +I   +A    + NA+I+                    RD+VSWN
Sbjct: 337 SHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWN 396

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           TMI+ +  +GL  E   L  EM   GF  D VT   LLSA S+                 
Sbjct: 397 TMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH----------------- 439

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSG---DRDQATWNAMIAGYTQNGLLEEA 497
                            SGL+   +  F     G         +  M+   ++ G L+EA
Sbjct: 440 -----------------SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           +   + M    +  +V    ++L AC    NI+LGK++    I+ L  +       L ++
Sbjct: 483 YEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRM-IQELGPEGTGNFVLLSNI 538

Query: 558 YSKSGVINYAANV 570
           YS +G  + AA V
Sbjct: 539 YSAAGRFDEAAEV 551



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 22/198 (11%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + G    A  LFD +    TV ++ ++ G+V N    EA L++ +M+  +   
Sbjct: 265 SLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACN--V 322

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
             D  T  S++ AC+    L+ G+  H    IR  ++ +  + N+L++MY+ C       
Sbjct: 323 EPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS-ICNALIDMYAKC------- 374

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                       + DL  +VF+ M  R++V+WNT+++ Y       EA   F  M  +G 
Sbjct: 375 -----------GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGF 423

Query: 223 RPSTISFVNVFPALSSLG 240
            P  ++F+ +  A S  G
Sbjct: 424 PPDGVTFICLLSACSHSG 441


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 225/761 (29%), Positives = 383/761 (50%), Gaps = 51/761 (6%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H AR LFD +     V W TI+          +A+ L+  M  S  Y   + +T SS L+
Sbjct: 66  HRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYP--NEFTLSSALR 123

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           +C        G  +HC  ++     +RFV  SL+  Y+ C         G   VE     
Sbjct: 124 SCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKC---------GCCSVEA---- 170

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
           + L+  V D     +VV+W T++S  V+  ++ EA   +  M+  G+ P+  +FV +  A
Sbjct: 171 WKLLSLVKDG---GDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGA 227

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           +SS        +++  L+  G+E   +L + ++ + MY++      A K+ +   E +  
Sbjct: 228 VSSFLGLSYGKLLHAHLIMFGAEL--NLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVY 285

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +W T+I G+ QN    EAI +F + +EL  ++ ++ T+ S L+A S +  LDLG+Q H+ 
Sbjct: 286 LWTTLISGFTQNLQVREAISVF-RDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSR 344

Query: 356 II---------------------KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           +I                      +     V V   +   +V+ W ++I+ F +  L+D 
Sbjct: 345 VIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDS 404

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
              L  EMQ  G   +S T++A+L A S  R+       H ++++  +  +  + + L+D
Sbjct: 405 -FQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVD 463

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            YA  G+I  A  +    +   RD  T+  + A   Q G    A      M    +  + 
Sbjct: 464 TYAGVGMIDEAWSVIGTMNL--RDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDE 521

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            ++AS L A   +G +E GKQLH +S++    +   V  SL+ +YSK G I+ A   F  
Sbjct: 522 FSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKD 581

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I E ++ ++  +I G+  +G+   ALS F  M+  G++PD+IT ++++SACS+ GL++ G
Sbjct: 582 ISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELG 641

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L+ F  MQ+EY I P  +HY C+ D+LGR G++ EA   ++++  + + L I  +LL +C
Sbjct: 642 LEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSL-ICKTLLNAC 700

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
            LHG+  L E +A++ LE+D  +  P  ++LL+N+Y   G  +  +K R+ MRERGLR+ 
Sbjct: 701 NLHGNVALGEDMARRCLELDPSD--PAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRS 758

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
            G  W+++   V+ F++   E     +I E LE L  E RN
Sbjct: 759 PGQCWMEIRSRVHHFSAG--EKINEDEITEKLEFLITEFRN 797



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 205/407 (50%), Gaps = 30/407 (7%)

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           K    ++  ++KLG ++  DL++ ++ + +YA+      AR +FD    R+   W T++ 
Sbjct: 31  KEGICIHSPIIKLGLQH--DLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            + +  H  +A++LF  ++   E   ++ T  SAL +   L E + G Q+H   +K  + 
Sbjct: 89  SHTKTKHHSDALQLFDMMIGSGEYP-NEFTLSSALRSCFALGEFERGMQIHCSAVKLGLE 147

Query: 363 LPVIVLNAVIE----------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   V  +++E                       DVVSW TM+S+ V+NG   E   +  
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYV 207

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           +M + G   +  T   LL A S+      GK  HA+L+  G      +++ ++DMY+K  
Sbjct: 208 KMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCR 267

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A ++   N + + D   W  +I+G+TQN  + EA   FR M    + PN  T +S+
Sbjct: 268 RMVDAIKV--SNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSL 325

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK-SGVINYAANVFAKIPEKN 578
           L A + + +++LG+Q H   I   L+ ++++G +L+DMY K S +   A  VF +I   N
Sbjct: 326 LNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPN 385

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            + +T++I G+ +  + E +  LF  M+  G+ P++ T  A+L ACS
Sbjct: 386 VMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACS 431



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 89/188 (47%), Gaps = 22/188 (11%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T   VL  CN   +++ G  +H   I+  L  ++++  +L+ +Y+K+  ++ A ++F ++
Sbjct: 17  TCLRVLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEM 75

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P ++ V++TT++  + +      AL LF  M G G  P+  T  + L +C   G  + G+
Sbjct: 76  PNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGM 135

Query: 635 QI------FDLMQQEYKIQPSTEHY----CCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           QI        L    +      E Y    CC           VEA++ +  + + G+V+ 
Sbjct: 136 QIHCSAVKLGLEMNRFVGTSLVEFYTKCGCC----------SVEAWKLLSLVKDGGDVVS 185

Query: 685 IWGSLLGS 692
            W ++L S
Sbjct: 186 -WTTMLSS 192


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  335 bits (859), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 226/764 (29%), Positives = 376/764 (49%), Gaps = 88/764 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            +A+ LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V 
Sbjct: 100 EIAQVLFSKLRVRNVFSW-AAIIGVKCRIGLGEGALMGFVEMLENGIFP--DNFVVPNVC 156

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC   +  R G+ VH +  +   +   FV +SL +MY  C    DA             
Sbjct: 157 KACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDAR------------ 204

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVFD +  RN VAWN ++  YV+   Y EA+R    M + GI P+ ++      
Sbjct: 205 ------KVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLS 258

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++G  +     + + +  G E  N   + +S +  Y ++G  ++A  IFD  +E++ 
Sbjct: 259 ASANMGGIEEGKQSHAIAIVNGLELDN--ILGTSILNFYCKVGLIEYAEMIFDGMIEKDV 316

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ     EAI +  Q++  + + FD VT  + +SA +  Q L LG+++  
Sbjct: 317 VTWNLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 375

Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y I++ +   ++                    V ++ +++D++ WNT++SA+  +GL  E
Sbjct: 376 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 435

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L YEMQ +    + +T   ++ +                LLR+G   E  E +L   
Sbjct: 436 ALRLFYEMQLESVPPNVITWNLIILS----------------LLRNGQVNEAKEMFL--Q 477

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
              SG+                +  +W  M+ G  QNG  EEA +  R+M E  + PN  
Sbjct: 478 MQSSGIFP--------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAF 523

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF---VGTSLIDMYSKSGVINYAANVF 571
           TI   L AC  + ++  G+ +HG+ IR    Q  F   + TSL+DMY+K G IN A  VF
Sbjct: 524 TITVALSACVNLASLHFGRSIHGYIIRN--QQYSFSASIETSLVDMYAKCGDINKAERVF 581

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
                     Y  MI  Y  +G    A++L+RS++  G++PD IT  ++LSAC+Y   V+
Sbjct: 582 GSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVN 641

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           + +++F  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  + +   +  SL  
Sbjct: 642 QAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQ-SLFE 700

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           SC     +EL E ++K LLE +  NS  G +V++SN YA EG+W+ V K+R+ M+ +GL+
Sbjct: 701 SCSKQHKTELVEYLSKHLLESEPDNS--GNYVMISNAYAVEGSWDEVAKMREMMKVKGLK 758

Query: 752 KEVGCSWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           K+ GCSWI + G    V+ F + D+ H ++ +I  ML  L  +M
Sbjct: 759 KKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 802



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 238/461 (51%), Gaps = 25/461 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A+ +F     RN   W  +
Sbjct: 61  DLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAI 120

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE + I  D+    +   A   LQ    G+ +H Y+ K  
Sbjct: 121 IGVKCRIGLGEGALMGFVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 179

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + +R+ V+WN ++  +VQNG+ +E + L+ 
Sbjct: 180 LHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLS 239

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           EM+K+G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + +++ Y K G
Sbjct: 240 EMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVG 299

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF+     ++D  TWN +I+GY Q GL+EEA    + M   N+  + VT++++
Sbjct: 300 LIEYAEMIFD--GMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTL 357

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+ L+ ++ + ++ +DMY+K G I  A  VF    +K+ 
Sbjct: 358 MSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDL 417

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y   G+S  AL LF  M+   + P+ IT+  ++ +    G V+E  ++F L
Sbjct: 418 ILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF-L 476

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             Q   I P+   +  + + L + G   EA  F++++ E G
Sbjct: 477 QMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESG 517



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  GQQ+HA I+K         ++   +++  A  +              R+V SW  
Sbjct: 60  RDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 119

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM + G   D+  V  +  A   L+    G+  H Y+ + G
Sbjct: 120 IIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 179

Query: 442 IHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K G++  AR++F+     DR+   WNA++ GY QNG+ EEA   
Sbjct: 180 LHHCVFVASSLADMYGKCGVLDDARKVFDYIP--DRNAVAWNALMVGYVQNGMYEEAIRL 237

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
             +M +  + P  VT+++ L A   MG IE GKQ H  +I   L+ +  +GTS+++ Y K
Sbjct: 238 LSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 297

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F  + EK+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 298 VGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTL 357

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G +I     Q Y I+   E    +A    DM  + G +V A +     
Sbjct: 358 MSAATSTQNLKLGKEI-----QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDST 412

Query: 677 GEEGNVLEIWGSLLGS 692
            ++  +L  W +LL +
Sbjct: 413 VQKDLIL--WNTLLSA 426



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   G+Q HA +L+ G 
Sbjct: 18  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 77

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A+ +F K     R+  +W A+I    + GL E A +
Sbjct: 78  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV--RNVFSWAAIIGVKCRIGLGEGALM 135

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+  +  L   VFV +SL DMY 
Sbjct: 136 GFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 195

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF  IP++N+V +  +++GY Q+GM E A+ L   M+  GIEP  +T   
Sbjct: 196 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVST 255

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G ++EG Q
Sbjct: 256 CLSASANMGGIEEGKQ 271



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 198/457 (43%), Gaps = 91/457 (19%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  EAI +   M++ +   
Sbjct: 290 SILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKF 349

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A   T+NL++GK + C+ IR        + ++ ++MY+ C S ++A+ 
Sbjct: 350 DC--VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK- 406

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+  +++++ WNT++S Y  +    EA+R F  M    + 
Sbjct: 407 -----------------KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVP 449

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS IF            
Sbjct: 450 PNVITWNLIILSLLRNGQVNEAKEMF-------------LQMQSSGIF------------ 484

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  T   ALSA   L
Sbjct: 485 --------PNLISWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFTITVALSACVNL 535

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS------------------------- 378
             L  G+ +H YII+N         +A IE  +V                          
Sbjct: 536 ASLHFGRSIHGYIIRN----QQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPL 591

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-- 436
           +N MISA+   G   E + L   ++  G   D++T+T+LLSA +  R  DV +    +  
Sbjct: 592 YNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGR--DVNQAIEVFRD 649

Query: 437 -LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
            + +HG+    +E Y  ++D+ A +G    A ++ E+
Sbjct: 650 MVSKHGMK-PCLEHYGLMVDLLASAGETDKALRLMEE 685


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 205/620 (33%), Positives = 344/620 (55%), Gaps = 48/620 (7%)

Query: 173 YSKY-DL--VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           YSK+ DL     VF  ++  N ++WN I+  ++      EA+  ++ M   G++    +F
Sbjct: 72  YSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTF 131

Query: 230 VNVFPALSSLGDYKSADVVYGLLV-----KLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
             +  A+ SL     +DV+ G +V     KLG  Y  DL+  ++ I +YA  GC  + R 
Sbjct: 132 PTINRAVMSL----KSDVLLGKMVHCDAMKLGFGY--DLYFCNTMIEVYARCGCVYYGRV 185

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQL 343
           +FD    R+   W +MI GYV   +   A ELF ++ LE++    + VT +  L      
Sbjct: 186 MFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLEMEP---NSVTLIVMLKGCYAY 242

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
                G+QLH YIIKN + +   V N+++                     RDV+SWNT+I
Sbjct: 243 DNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLI 302

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
             +   G D E ++  +   +    + S T+T ++S  + + N   G++ H++ ++ G+ 
Sbjct: 303 GFYALRG-DAEEMVCGFNQMRGEVALSSETLTLVISVFAKIGNLVEGEKLHSFSIKVGLC 361

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            + + + L+D YAK G ++ + Q+F   +   R  +TW  M++G  QNG  +EA   FRQ
Sbjct: 362 DDVLLASLLDFYAKCGELRNSVQLF--GEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQ 419

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR---YLLD-QNVFVGTSLIDMYS 559
           M    V      + S++ AC+ +G+++L K++HG+  R   Y+L+  N+ +GTS+++MY 
Sbjct: 420 MQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYI 479

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           + G I+ A   F ++  K+++T+T+MI GYG HGM+  AL LF  M    + P+ +TF++
Sbjct: 480 RCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLS 539

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +LSACS++GL+ +G ++F  M+  + ++P  +HY C+ D+LGR GK+ EA   +  +   
Sbjct: 540 LLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVV 599

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            +   IWG+L+ SCR+HG  ++ E  A++LLEM++ N   GY+ LLSNI A  G W+ V+
Sbjct: 600 ADS-RIWGALVASCRVHGDKKVGEFAAQRLLEMESDN--VGYYTLLSNIQAMVGKWDEVE 656

Query: 740 KVRKEMRERGLRKEVGCSWI 759
           +VRK + E+ LRK  G S I
Sbjct: 657 QVRKVIHEKDLRKTPGWSCI 676



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 275/593 (46%), Gaps = 58/593 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F  +  P T+ WN I+   +   L  EA+LLY +M++S   T  D +T+ ++ +A 
Sbjct: 81  AISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESGVKT--DAFTFPTINRAV 138

Query: 118 AETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
              + ++ +GK VHC  ++       +  N+++ +Y+ C         G  Y    Y + 
Sbjct: 139 MSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARC---------GCVY----YGRV 185

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +FD M  R++V+W +++S YV       A   F  M R+ + P++++ + +    
Sbjct: 186 -----MFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKM-RLEMEPNSVTLIVMLKGC 239

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +  ++     ++  ++K G        V +S + MY+  G       +F     R+   
Sbjct: 240 YAYDNFSEGRQLHCYIIKNGLLIYGS--VQNSILRMYSITGSAKEVESLFVEIYRRDVIS 297

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WNT+IG Y       E +  F Q+    E+     T    +S  +++  L  G++LH++ 
Sbjct: 298 WNTLIGFYALRGDAEEMVCGFNQM--RGEVALSSETLTLVISVFAKIGNLVEGEKLHSFS 355

Query: 357 IK-------------NFVAL------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           IK             +F A        V +   +  R   +W  M+S  +QNG  DE + 
Sbjct: 356 IKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIH 415

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEG----MESYLI 452
           L  +MQ  G  + +  + +L+ A S+L +  + K+ H YL R+  +  EG    + + ++
Sbjct: 416 LFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSIL 475

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           +MY + G I +AR+ F  N    +D  TW +MI GY  +G+  EA   F QML   V PN
Sbjct: 476 NMYIRCGSISSAREYF--NRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPN 533

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYA-AN 569
            VT  S+L AC+  G I  G +L   S++++  ++ ++   T ++D+  + G I  A A 
Sbjct: 534 RVTFLSLLSACSHSGLIRQGCELF-LSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAM 592

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           +   +   +S  +  ++     HG  ++ +  F + +   +E D + +  +LS
Sbjct: 593 IIRMVVVADSRIWGALVASCRVHG--DKKVGEFAAQRLLEMESDNVGYYTLLS 643



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 212/492 (43%), Gaps = 77/492 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYS 111
           G  +  R +FD ++    V W ++I G+V     + A  L+++M+ +  P    ++ T  
Sbjct: 178 GCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLEMEP----NSVTLI 233

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK C    N   G+ +HC+ I+        V NS+L MYS   S+ + E         
Sbjct: 234 VMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVE--------- 284

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     +F  + RR+V++WNT++ +Y       E V  F  M R  +  S+ +   
Sbjct: 285 ---------SLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQM-RGEVALSSETLTL 334

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V    + +G+    + ++   +K+G    +D+ +AS   F YA+ G    + ++F     
Sbjct: 335 VISVFAKIGNLVEGEKLHSFSIKVG--LCDDVLLASLLDF-YAKCGELRNSVQLFGEIPC 391

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R++  W  M+ G +QN +  EAI LF Q ++   +        S + A S L  L L ++
Sbjct: 392 RSSSTWKLMMSGCIQNGYFDEAIHLFRQ-MQASGVQLQAQILGSLVDACSHLGSLQLCKE 450

Query: 352 LHAYIIKNF--------VALPVIVLNAVIE----------------RDVVSWNTMISAFV 387
           +H Y+ +NF        + L   +LN  I                 +D ++W +MI  + 
Sbjct: 451 IHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYG 510

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF--- 444
            +G+  E L L  +M  +  + + VT  +LLSA S           H+ L+R G      
Sbjct: 511 IHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACS-----------HSGLIRQGCELFLS 559

Query: 445 ----EGME------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
                GME      + ++D+  + G IK A  +  +      D   W A++A    +G  
Sbjct: 560 MKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVV-VADSRIWGALVASCRVHGDK 618

Query: 495 EEAFVAFRQMLE 506
           +    A +++LE
Sbjct: 619 KVGEFAAQRLLE 630



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 24/219 (10%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           ++HS S  +       + S L    + G    + QLF  I   ++  W  ++ G + N  
Sbjct: 350 KLHSFSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGY 409

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF----SNPS 141
             EAI L+ QM+ S            S++ AC+   +L++ K +H +  R F       +
Sbjct: 410 FDEAIHLFRQMQASG--VQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDN 467

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             +  S+LNMY  C S   A                   + F+ M  ++ + W +++  Y
Sbjct: 468 IHLGTSILNMYIRCGSISSAR------------------EYFNRMVAKDNITWTSMIEGY 509

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
                 +EA++ F  ML   + P+ ++F+++  A S  G
Sbjct: 510 GIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSG 548


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 226/750 (30%), Positives = 381/750 (50%), Gaps = 65/750 (8%)

Query: 68  PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           P   +WN+++      +     +  + +M+ S    S   +T   V  A AE   L +G 
Sbjct: 70  PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPS--RFTAPLVASAAAELGALPVGA 127

Query: 128 AVHCHFIR---CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           AVH + +R      + S  V +SL+ MY+ C S  DA                   ++FD
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA------------------VRLFD 169

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSSLG 240
            M  R+VVAW  ++S  V   +  E +     M+R     G RP++ +  +   A   LG
Sbjct: 170 EMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLG 229

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      ++G  VK G  +     V SS   MY +    + AR +F    E++   W ++
Sbjct: 230 ELSVGTCLHGFGVKAGVGHCPS--VVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSL 287

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IG Y +  H  +A+ELF+  +E   +  D+V     L+ +    ++  G+  HA I++  
Sbjct: 288 IGAYCRAGHAEKAVELFLG-MEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRN 346

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V++ NA+I                    +RD  SW++M+ A+ + GLD + L L  
Sbjct: 347 FGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYR 406

Query: 401 EMQ---KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEGMESYLIDMYA 456
           EMQ   K  F  D+ ++ +++S+ S L    +G+  H Y ++H       + + LI MY 
Sbjct: 407 EMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYG 466

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G    AR+IF    +  +D  TW+A+I+ Y+  G  ++A + + QML   V PN  T+
Sbjct: 467 RCGNFDVARKIFGMVKT--KDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            SV+ +C  +  +E G+ +H       L+ ++ + T+L+DMY K G +  A  +F  + E
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ VT+  MI GYG HG + +AL LF  M+   ++P+++TF+A+LSAC +AGLVD+G ++
Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M +EY ++P+ +HY C+ D+LG+ G + EA + V  +  E +   IWG+LLG+C++H
Sbjct: 645 FTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDG-GIWGTLLGACKMH 702

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+   VAKK    D  N   GY++L+SN Y     W  ++K+R  M+  G+ K +G 
Sbjct: 703 DNFEMGLRVAKKAFASDPEND--GYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGW 760

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           S ID+ G++     K+Q     H ++E  E
Sbjct: 761 STIDICGFM-----KNQLTQWQHSLFEQSE 785


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 209/641 (32%), Positives = 338/641 (52%), Gaps = 45/641 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLG 240
           VF   R R+V ++NTI+S +       EA+     MLR G +RP  ++        +  G
Sbjct: 89  VFAAARARDVSSYNTILSAFPDP---AEALDFASWMLRSGAVRPDAVTCTVALSLAAGRG 145

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      ++ L  + G     D+FV ++ +  Y+  G    AR +FD+   R+   WN +
Sbjct: 146 EGFLVRQLHALAWRSG--LAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNAL 203

Query: 301 IGGYVQNNH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK- 358
           I G  Q+   P E I +F+++L   ++  D ++  S + A     +L+LG+Q+H + +K 
Sbjct: 204 ICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKL 263

Query: 359 ---NFVALPVIVL----------------NAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
               +V++  +++                +A+ ERDVVSW T IS    +G  ++ L L 
Sbjct: 264 GVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS---MDG--EDALTLF 318

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKS 458
             M++ G   + VT  AL+SA          +  HA  L+  +  E   S  LI MYAK+
Sbjct: 319 NGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKA 378

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
             +  AR +F+      R+   WNA+I+GY QNG   +A   F  M    +TPN  T AS
Sbjct: 379 RRMDDARMVFDLMPR--REIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFAS 435

Query: 519 VLPACNPMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           VL A   +  + +  G+  H  ++      + +V  +LIDMY+K G +  +   F +  +
Sbjct: 436 VLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQ 495

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ + +T +I    +HG     +SLF  M   G+ PD +  +AVL+AC Y G+VD G  I
Sbjct: 496 RSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDI 555

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           FD M  +  ++   EHY CV DMLGR G++ EA E +  +   G  +    SLLG+CR+H
Sbjct: 556 FDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRM-PAGPSVSALQSLLGACRIH 614

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G +E+ E +A+ L E +   S  G +VLLSNIYA+ G+W+ V KVR++MR+RG++KE+G 
Sbjct: 615 GDAEIGERIARILTEKEPTES--GAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGF 672

Query: 757 SWIDVGG----YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           SW+D G     ++++F+S D  HP++ +IY + + L  EM+
Sbjct: 673 SWVDAGAGEALHLHKFSSDDTTHPRTEEIYAVADVLGWEMK 713



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 203/460 (44%), Gaps = 43/460 (9%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V +S    YA+ G F  A  +F     R+   +NT++  +     P EA++    +L   
Sbjct: 69  VTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPD---PAEALDFASWMLRSG 125

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------ 372
            +  D VT   ALS  +   E  L +QLHA   ++ +A  V V NA++            
Sbjct: 126 AVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEA 185

Query: 373 --------ERDVVSWNTMISAFVQNG-LDDEGLMLVYEMQKQG-FMIDSVTVTALLSAAS 422
                    RD+VSWN +I    Q+G    E + +   M + G    D ++V +++ A  
Sbjct: 186 RSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACG 245

Query: 423 NLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
                ++G+Q H + ++ G+  +  + + L+ MY K G   +AR++F+     +RD  +W
Sbjct: 246 GEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMS--ERDVVSW 303

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT---IASVLPACNPMGNIELGKQLHGF 538
              I   + +G  E+A   F  M    V PN VT   + S LPA  P    ++   +H  
Sbjct: 304 TTAI---SMDG--EDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQM---VHAA 355

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            ++  +        SLI MY+K+  ++ A  VF  +P +  + +  +I GY Q+G    A
Sbjct: 356 CLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDA 415

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL-QIFDLMQQEYKIQPSTEHYCCVA 657
           L LF SM  C + P+  TF +VLSA +    V     Q++           S      + 
Sbjct: 416 LELFSSMARC-LTPNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALI 474

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           DM  + G + E+ +   E   E   L  W +++ +   HG
Sbjct: 475 DMYAKRGNLEESRKAFHE--TEQRSLIAWTAIISANARHG 512



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 213/505 (42%), Gaps = 93/505 (18%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           AR +FD +     V WN +I G   + + P E I ++ +M +       D  +  SV+ A
Sbjct: 185 ARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQP-DRISVCSVIPA 243

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C     L +G+ VH   ++        + N L+ MY  C +   A               
Sbjct: 244 CGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSAR-------------- 289

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++FD M  R+VV+W T +S   +     +A+  F  M R G+ P+ ++FV +  AL
Sbjct: 290 ----RLFDAMSERDVVSWTTAISMDGE-----DALTLFNGMRRDGVPPNEVTFVALMSAL 340

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +    + A +V+   +K  +    +   ++S I MYA+    D AR +FD    R    
Sbjct: 341 PADCPARGAQMVHAACLK--AAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIA 398

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL--GQQLHA 354
           WN +I GY QN    +A+ELF  +     +  ++ TF S LSAV+ ++ + +  GQ  H+
Sbjct: 399 WNAVISGYAQNGRCNDALELFSSMARC--LTPNETTFASVLSAVTAVETVSMAYGQMYHS 456

Query: 355 YII------KNFVALPVIVLNA--------------VIERDVVSWNTMISAFVQNGLDDE 394
             +        +VA  +I + A                +R +++W  +ISA  ++G    
Sbjct: 457 RALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGA 516

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            + L  +M + G   D V + A+L+A                  R+G             
Sbjct: 517 VMSLFGDMARSGVAPDGVVLLAVLTA-----------------CRYG------------- 546

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATW----NAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
               G++   R IF+   + DR    W    + ++    + G L E   A   M+     
Sbjct: 547 ----GMVDAGRDIFDSM-AADRGVELWPEHYSCVVDMLGRAGRLAE---AEELMMRMPAG 598

Query: 511 PNVVTIASVLPACNPMGNIELGKQL 535
           P+V  + S+L AC   G+ E+G+++
Sbjct: 599 PSVSALQSLLGACRIHGDAEIGERI 623



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 33/303 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  AR+LFD+++    V W T I     +    +A+ L++ M++       +  T+ +
Sbjct: 283 GAPGSARRLFDAMSERDVVSWTTAI-----SMDGEDALTLFNGMRRDG--VPPNEVTFVA 335

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ A       R  + VH   ++   +      NSL+ MY+      DA M         
Sbjct: 336 LMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARM--------- 386

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VFD M RR ++AWN ++S Y +  R  +A+  F  M R  + P+  +F +V
Sbjct: 387 ---------VFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNETTFASV 436

Query: 233 FPALSSLGDYKSADVVYGLLV---KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             A++++   ++  + YG +     L   + +  +VA + I MYA+ G  + +RK F   
Sbjct: 437 LSAVTAV---ETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHET 493

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +R+   W  +I    ++      + LF   +    +  D V  L+ L+A      +D G
Sbjct: 494 EQRSLIAWTAIISANARHGSYGAVMSLFGD-MARSGVAPDGVVLLAVLTACRYGGMVDAG 552

Query: 350 QQL 352
           + +
Sbjct: 553 RDI 555


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 220/760 (28%), Positives = 377/760 (49%), Gaps = 84/760 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  +F  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V KA
Sbjct: 106 AEVIFSKLRVRNVFSW-AAIIGVKCRIGLCEGALMGFVEMLENEIFP--DNFVVPNVCKA 162

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   +  R G+ VH + I+       FV +SL +MY  C    DA               
Sbjct: 163 CGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDAR-------------- 208

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVFD +  RNVVAWN ++  YV+     EA+R F  M + G+ P+ ++      A 
Sbjct: 209 ----KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSAS 264

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +++   +     + + +  G E  N   + +S +  Y ++G  ++A  +FD   +++   
Sbjct: 265 ANMVGVEEGKQSHAIAIVNGLELDN--ILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVT 322

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I GYVQ     +AI +  Q++ L+++ +D VT  + +SA ++ + L  G+++  Y 
Sbjct: 323 WNLLISGYVQQGLVEDAIYM-SQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYC 381

Query: 357 IKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           I++ +   ++                    V ++ +E+D++ WNT+++A+ Q+GL  E L
Sbjct: 382 IRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEAL 441

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L YEMQ +    + +T   ++   S LRN +V +    +L    +   G+   LI    
Sbjct: 442 RLFYEMQLESVPPNVITWNLII--LSLLRNGEVNEAKEMFL---QMQSSGISPNLI---- 492

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
                                  +W  M+ G  QNG  EEA +  R+M E  + PN  +I
Sbjct: 493 -----------------------SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 529

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
              L A   + ++  G+ +HG+ IR L    +V + TSL+DMY+K G IN A  VF    
Sbjct: 530 TVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKL 589

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
                 Y  MI  Y  +G  + A++L+RS++  GI+PD++TF ++LSAC++AG +D+ + 
Sbjct: 590 YSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVG 649

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           +F  M  ++ + P  EHY  + D+L   G+  +A   ++E+  + +   I  SL+ SC  
Sbjct: 650 VFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQ-SLVASCNK 708

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
              +EL E +++ LLE +  NS  G +V +SN YA EG+W+ V K+R+ M+ +GL+K+ G
Sbjct: 709 QHKTELVEYLSRHLLESEPENS--GNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 766

Query: 756 CSWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           CSWI + G    V+ F + D  H ++  I  +L  L  +M
Sbjct: 767 CSWIQIKGEEEGVHVFVANDXTHIRNDXIQRILALLLYDM 806



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 240/461 (52%), Gaps = 25/461 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A  IF     RN   W  +
Sbjct: 65  DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAI 124

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE +EI  D+    +   A   LQ    G+ +H Y+IK  
Sbjct: 125 IGVKCRIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAG 183

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + ER+VV+WN ++  +VQNG+++E + L  
Sbjct: 184 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFS 243

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+K+G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + L++ Y K G
Sbjct: 244 DMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVG 303

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  +F++    D+D  TWN +I+GY Q GL+E+A    + M    +  + VT++++
Sbjct: 304 LIEYAEMVFDR--MFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTL 361

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++ GK++  + IR+ LD ++ + ++ +DMY+K G I  A  VF    EK+ 
Sbjct: 362 MSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDL 421

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y Q G+S  AL LF  M+   + P+ IT+  ++ +    G V+E  ++F L
Sbjct: 422 ILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMF-L 480

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             Q   I P+   +  + + + + G   EA  F++++ E G
Sbjct: 481 QMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 521



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  G+Q+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 64  RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAA 123

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM +     D+  V  +  A   L+    G+  H Y+++ G
Sbjct: 124 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAG 183

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +     + S L DMY K G++  AR++F+  +  +R+   WNA++ GY QNG+ EEA   
Sbjct: 184 LEDCVFVASSLADMYGKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRL 241

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F  M +  V P  VT+++ L A   M  +E GKQ H  +I   L+ +  +GTSL++ Y K
Sbjct: 242 FSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCK 301

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  VF ++ +K+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 302 VGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTL 361

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G ++     Q Y I+ S +    +A    DM  + G +V+A +     
Sbjct: 362 MSAAARTENLKFGKEV-----QCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDST 416

Query: 677 GEEGNVLEIWGSLLGS 692
            E+  +L  W +LL +
Sbjct: 417 VEKDLIL--WNTLLAA 430



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I        L      R+   GKQ HA +L++G 
Sbjct: 22  VSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGD 81

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A  IF K     R+  +W A+I    + GL E A +
Sbjct: 82  FYARNEYIETKLVIFYAKCDALEXAEVIFSKLRV--RNVFSWAAIIGVKCRIGLCEGALM 139

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+ I+  L+  VFV +SL DMY 
Sbjct: 140 GFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYG 199

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ LF  M+  G+EP  +T   
Sbjct: 200 KCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVST 259

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +    V+EG Q
Sbjct: 260 CLSASANMVGVEEGKQ 275



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 200/452 (44%), Gaps = 81/452 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+      
Sbjct: 294 SLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKY 353

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A A T NL+ GK V C+ IR   +    + ++ ++MY+ C S +DA+ 
Sbjct: 354 DC--VTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAK- 410

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+   ++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 411 -----------------KVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVP 453

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G+   A  ++             L + SS I             
Sbjct: 454 PNVITWNLIILSLLRNGEVNEAKEMF-------------LQMQSSGI------------- 487

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  +   ALSA + L
Sbjct: 488 -------SPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSASANL 539

Query: 344 QELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNTM 382
             L  G+ +H YII+N      +                     V  + +  ++  +N M
Sbjct: 540 ASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAM 599

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR--NQDVGKQTHAYLLRH 440
           ISA+   G   E + L   ++  G   DSVT T+LLSA ++    +Q VG  T A +L+H
Sbjct: 600 ISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFT-AMVLKH 658

Query: 441 GIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           G+    +E Y  ++D+ A +G  + A ++ E+
Sbjct: 659 GMT-PCLEHYGLMVDLLASAGETEKAIRLIEE 689


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 214/644 (33%), Positives = 342/644 (53%), Gaps = 54/644 (8%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           ++  WN  +S Y++T R  EA+R F+ M R     S++S+  +       G+++ A +++
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRW----SSVSYNAMISGYLRNGEFELARMLF 113

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             + +       DL   +  I  Y        AR++F+   ER+   WNT++ GY QN  
Sbjct: 114 DEMPE------RDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE--LDLGQQ-----------LHAYI 356
             +A  +F ++ E +++ ++    LSA    S+L+E  +  G +           L  ++
Sbjct: 168 VDDARRVFDRMPEKNDVSWN--ALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFV 225

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML-----VYEMQKQGFMIDS 411
            K  +       +++  RDVVSWNT+I+ + QNG  DE   L     V+++     M+  
Sbjct: 226 KKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSG 285

Query: 412 VTVTALLSAASNL--RNQDVGKQTHAYLLRHGIHFEGME-----------------SYLI 452
                ++  A  L  R  +  + +   +L   +  E +E                 + +I
Sbjct: 286 YIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMI 345

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
             YA+ G I  A+ +F+K     RD  +W AMIAGY+Q+G   EA   F  M       N
Sbjct: 346 TGYAQCGKISEAKNLFDKMPK--RDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLN 403

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
             + +S L  C  +  +ELGKQLHG  ++   +   FVG +L+ MY K G I  A ++F 
Sbjct: 404 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 463

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           ++  K+ V++ TMI GY +HG  E AL  F SMK  G++PD  T VAVLSACS+ GLVD+
Sbjct: 464 EMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 523

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G Q F  M Q+Y ++P+++HY C+ D+LGR G + EA+  +K +  E +   IWG+LLG+
Sbjct: 524 GRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAA-IWGTLLGA 582

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
            R+HG++ELAE  A K+  M+  NS  G +VLLSN+YA  G W +V K+R  MR++G++K
Sbjct: 583 SRVHGNTELAETAADKIFAMEPENS--GMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 640

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             G SWI++    + F+  D+ HP+  +I+  LE L + M+ AG
Sbjct: 641 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAG 684



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 277/600 (46%), Gaps = 83/600 (13%)

Query: 29  SLSPPIPKLKTPTIRS---RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           S + P+PK     I+     +S   + GR   A ++F  + R ++V +N +I G++ N  
Sbjct: 46  SQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGE 105

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV- 144
              A +L+ +M +       D  +++ ++K     RNL  GKA    F R    P R V 
Sbjct: 106 FELARMLFDEMPER------DLVSWNVMIKGYVRNRNL--GKAREL-FERM---PERDVC 153

Query: 145 -YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVK 203
            +N++L+ Y+      DA                   +VFD M  +N V+WN ++S YV+
Sbjct: 154 SWNTILSGYAQNGCVDDAR------------------RVFDRMPEKNDVSWNALLSAYVQ 195

Query: 204 TERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS----LGDYKSADVVYGLLVKLGSEY 259
             +  EA   F      G R +         AL S    LG +     +        S  
Sbjct: 196 NSKLEEACVLF------GSRENW--------ALVSWNCLLGGFVKKKKIVEARQFFDSMK 241

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           V D+   ++ I  YA+ G  D AR++FD     +   W  M+ GY+QN    EA ELF +
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDR 301

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH----------------AYIIKNFVAL 363
           + E +E+ ++     + L+   Q + +++ ++L                  Y     ++ 
Sbjct: 302 MPERNEVSWN-----AMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 356

Query: 364 PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              + + + +RD VSW  MI+ + Q+G   E L L   M+++G  ++  + ++ LS  ++
Sbjct: 357 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCAD 416

Query: 424 LRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +   ++GKQ H  L++ G     F G  + L+ MY K G I+ A  +F+  +   +D  +
Sbjct: 417 VVALELGKQLHGRLVKGGYETGCFVG--NALLLMYCKCGSIEEANDLFK--EMAGKDIVS 472

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFS 539
           WN MIAGY+++G  EEA   F  M    + P+  T+ +VL AC+  G ++ G+Q  H  +
Sbjct: 473 WNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMT 532

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
             Y +  N      ++D+  ++G++  A N+   +P E ++  + T++     HG +E A
Sbjct: 533 QDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 592


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 215/657 (32%), Positives = 342/657 (52%), Gaps = 34/657 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD    R VVAW T++  Y K+ R+ +A + F  M R G +P  ++++ +    + L 
Sbjct: 95  RIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLE 154

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             K     +  +VKLG  ++N   V ++ +  Y + G  D AR++F      ++  +N M
Sbjct: 155 VAKELYQAHAQIVKLG-HHLNHR-VCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVM 212

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY  N    EAIELFV++  L      D TF + +SA   L +   GQQ+H +++K  
Sbjct: 213 ITGYANNGLNEEAIELFVEMQNLG-FKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTS 271

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V NA +                    E D VS+N +I+A+   G   E + L  
Sbjct: 272 FIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQ 331

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           E+Q   F   +     +LS A++  +  +G+Q HA ++      +  + + L+DMYAK G
Sbjct: 332 ELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCG 391

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
             + A +IF +  S  R    W AMI+   Q GL E     F +M   NV+ +  T A V
Sbjct: 392 KFEEADRIFLRLSS--RSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACV 449

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L A   + +I LGKQLH   IR     NV+ G +L+DMY+    I  A   F ++ E+N 
Sbjct: 450 LKASANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNV 508

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           VT+  ++  Y Q+G  +  L  F  M   G +PD+++F+ +L+ACS+  LV+EGL+ F+ 
Sbjct: 509 VTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFND 568

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M   Y + P  EHY  + D L R G+  EA + + ++  E + + +W S+L SCR+H + 
Sbjct: 569 MSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEI-VWTSVLNSCRIHKNY 627

Query: 700 ELAEVVAKKLLEMDT-RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            LA   A +L  M   R++ P  +V +SNI+AE G W++V KV+K MR+RG+RK    SW
Sbjct: 628 ALARKAAGQLFNMKVLRDAAP--YVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSW 685

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG---NKTIQNSNVDATPRFD 812
           +++   V+ F++ D +HPQ  +I   +E LA +M   G   + +  + NVD   + D
Sbjct: 686 VEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKID 742



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 162/644 (25%), Positives = 297/644 (46%), Gaps = 53/644 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           QL Q   L   +P   + +I   +S   + G   +AR++FD     T V W T+I  +  
Sbjct: 58  QLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSK 117

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +N   +A  L+++M +S   +  D  TY ++L  C +    +     H   ++   + + 
Sbjct: 118 SNRFGDAFKLFAEMHRSG--SQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNH 175

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V N+LL+ Y              K   +D ++     ++F  M   + V++N +++ Y 
Sbjct: 176 RVCNTLLDSY-------------FKTGGLDSAR-----RLFLEMCGWDSVSFNVMITGYA 217

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
                 EA+  F  M  +G +PS  +F  V  A   L D      ++G +VK  + ++ +
Sbjct: 218 NNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVK--TSFIRN 275

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +FV ++ +  Y++  C +  RK+F+   E +   +N +I  Y       E+I+LF Q L+
Sbjct: 276 VFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLF-QELQ 334

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
                  +  F + LS  +   +L +G+QLHA ++ +       V N++++         
Sbjct: 335 FTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFE 394

Query: 374 -----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                      R  V W  MISA VQ GL + GL L YEM++     D  T   +L A++
Sbjct: 395 EADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASA 454

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           NL +  +GKQ H+ ++R G         L+DMYA    IK A + FE  +  +R+  TWN
Sbjct: 455 NLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFE--EMSERNVVTWN 512

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIR 541
           A+++ Y QNG  +    +F +M+     P+ V+   +L AC+    +E G K  +  S  
Sbjct: 513 ALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGV 572

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---YGQHGMSER 597
           Y L       T+++D   +SG  + A  +  ++P E + + +T+++     +  + ++ +
Sbjct: 573 YNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARK 632

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           A     +MK   +  DA  +V + +  + AG  D  +++   M+
Sbjct: 633 AAGQLFNMK---VLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMR 673



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 206/446 (46%), Gaps = 28/446 (6%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y + G    AR+IFD+  ER    W TMIG Y ++N   +A +LF + +       D VT
Sbjct: 84  YVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAE-MHRSGSQPDYVT 142

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER------------------ 374
           +++ L+  + L+      Q HA I+K    L   V N +++                   
Sbjct: 143 YITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMC 202

Query: 375 --DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
             D VS+N MI+ +  NGL++E + L  EMQ  GF     T  A++SA+  L +   G+Q
Sbjct: 203 GWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQ 262

Query: 433 THAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            H ++++   I    + +  +D Y+K   +   R++F  N+  + D  ++N +I  Y   
Sbjct: 263 IHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLF--NEMPELDGVSYNVIITAYAWV 320

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
           G ++E+   F+++             ++L       ++++G+QLH   +  + D +  V 
Sbjct: 321 GKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVS 380

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            SL+DMY+K G    A  +F ++  +++V +T MI    Q G+ E  L LF  M+   + 
Sbjct: 381 NSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVS 440

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
            D  TF  VL A +    +  G Q+   + +   +   +   C + DM      + +A +
Sbjct: 441 ADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSG--CALLDMYANCASIKDAIK 498

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHG 697
             +E+ E   V   W +LL +   +G
Sbjct: 499 TFEEMSERNVV--TWNALLSAYAQNG 522



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 541 RYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           R LLDQ    N F    +I  Y KSG +  A  +F    E+  V +TTMI  Y +     
Sbjct: 63  RQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFG 122

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
            A  LF  M   G +PD +T++ +L+ C+   +  E   ++    Q  K+     H  C
Sbjct: 123 DAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKE---LYQAHAQIVKLGHHLNHRVC 178


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 229/732 (31%), Positives = 373/732 (50%), Gaps = 57/732 (7%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           + + GR   A + F+   R + V WNT+I G V N+    AI ++S M + S     +++
Sbjct: 114 LAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGS--CEPNSF 171

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYS VL ACA    L +G+AVH   +R       FV  S++NMY+        +M+    
Sbjct: 172 TYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAK-----SGDMIA--- 223

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       + F  M  RNVV+W T ++ +V+ E  V AVR  R M+R G+  +  +
Sbjct: 224 ----------AMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYT 273

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             ++  A S +   +    ++G+++K   E   D  V  + I  YA +G  + +   F+ 
Sbjct: 274 ATSILLACSQMYMIREVSQMHGMIMK--KELYLDHAVKEALICTYANIGAIELSETAFEE 331

Query: 289 C-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                +T +W+T I G   ++ P  +++L +++     +  +D  + S  S+   +  ++
Sbjct: 332 VGTVSSTRIWSTFISGVSSHSLP-RSLQLLMRMFR-QGLRPNDRCYASVFSS---MDSIE 386

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+QLH+ +IK+     V+V +A+                     ERD VSW  M++ F 
Sbjct: 387 FGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFA 446

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            +G   E   L   M   GF  D VT++A+LSA         GK  H ++LR       +
Sbjct: 447 SHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSI 506

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
              L+ MY+K    +TAR+IF+      +DQ  +++MI+GY+ NG   EA   F+ ML  
Sbjct: 507 SHCLVSMYSKCQEAQTARRIFDATPC--KDQVMFSSMISGYSTNGCSAEAMSLFQLMLST 564

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
               +    +S+L  C  +     GK LHG +I+  +  ++ V +SL+ +YSKSG +N +
Sbjct: 565 GFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDS 624

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF +I   + VT+T +I GY QHG    AL +F  M   G++PD +  V+VLSACS  
Sbjct: 625 RKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRN 684

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+EG+  F+ M+  Y ++P   HYCC+ D+LGR G++ +A  F++ +  + +++ +W 
Sbjct: 685 GLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLM-VWS 743

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +L  +CR+H  + L   V  K+ E D  +S  G    LSNI A  G+WE V +VRK M  
Sbjct: 744 TLFAACRVHNDAVLGGFVENKIRE-DGYDS--GSFATLSNILANSGDWEEVARVRKSM-- 798

Query: 748 RGLRKEVGCSWI 759
             ++KE G S +
Sbjct: 799 -DVKKEPGWSMV 809



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 209/441 (47%), Gaps = 29/441 (6%)

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
            R   A+  F +   +G  PS + F     A    G    A+ VY +  K G     D +
Sbjct: 48  RRLPSALASFVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDG--LTGDAY 105

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           V S  I + A+ G F+ A K F++    +   WNT+I G V+N+    AI++F  ++   
Sbjct: 106 VCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVR-G 164

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------VLNA 370
               +  T+   LSA +   EL +G+ +H  +++       FV   ++        ++ A
Sbjct: 165 SCEPNSFTYSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAA 224

Query: 371 VIE------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
           + E      R+VVSW T I+ FVQ       + L+ EM + G  ++  T T++L A S +
Sbjct: 225 MREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQM 284

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
                  Q H  +++  ++ +  ++  LI  YA  G I+ +   FE+  +    +  W+ 
Sbjct: 285 YMIREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTR-IWST 343

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
            I+G + + L     +  R M    + PN    ASV    + M +IE G+QLH   I+  
Sbjct: 344 FISGVSSHSLPRSLQLLMR-MFRQGLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDG 399

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              +V VG++L  MYS+   +  +  VF ++ E++ V++T M+ G+  HG S  A  LFR
Sbjct: 400 FVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFR 459

Query: 604 SMKGCGIEPDAITFVAVLSAC 624
            M   G +PD +T  A+LSAC
Sbjct: 460 IMILDGFKPDYVTLSAILSAC 480



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           TP+ +     L AC   G++   +Q++  + +  L  + +V + +ID+ +KSG    A  
Sbjct: 66  TPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALK 125

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F      ++V + T+I G  ++     A+ +F  M     EP++ T+  VLSAC+    
Sbjct: 126 AFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFTYSGVLSACAMGAE 185

Query: 630 VDEGLQIFDLMQQ---EYKIQPSTEHYCCVADMLGRVGKVVEA 669
           +  G  +  L+ +   EY +   T     + +M  + G ++ A
Sbjct: 186 LCVGRAVHGLVLRRDPEYDVFVGTS----IVNMYAKSGDMIAA 224


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 220/703 (31%), Positives = 350/703 (49%), Gaps = 84/703 (11%)

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           PY   +N+ + ++L  C +  +L   K +H   I+   + + F  + L+     C  S  
Sbjct: 19  PYKLLENHPHLNLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEF---CALSPS 72

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRR--NVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            ++            Y L   +F ++  +  N+  WNT++  +  T     ++  F  ML
Sbjct: 73  RDL-----------SYAL--SLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQML 119

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
             G+ P++ +F ++F + +       A  ++   +KL         V +S I MY+++G 
Sbjct: 120 HSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL--HPHVHTSLIHMYSQVGE 177

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              AR                                          +VFD  T   A+S
Sbjct: 178 LRHAR------------------------------------------LVFDKSTLRDAVS 195

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
             + +           Y+ +  V     + + +  +DVVSWN MI+ +VQ+G  +E L  
Sbjct: 196 FTALIT---------GYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALAC 246

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              MQ+     +  T+ ++LSA  +LR+ ++GK   +++   G      + + L+DMY+K
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK 306

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G I TAR++F+  +  D+D   WN MI GY    L EEA V F  ML  NVTPN VT  
Sbjct: 307 CGEIGTARKLFDGME--DKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFL 364

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLD----QNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +VLPAC  +G ++LGK +H +  + L       NV + TS+I MY+K G +  A  VF  
Sbjct: 365 AVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRS 424

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++  ++  MI G   +G +ERAL LF  M   G +PD ITFV VLSAC+ AG V+ G
Sbjct: 425 MGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG 484

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            + F  M ++Y I P  +HY C+ D+L R GK  EA   +  +  E +   IWGSLL +C
Sbjct: 485 HRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDG-AIWGSLLNAC 543

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R+HG  E  E VA++L E++  NS  G +VLLSNIYA  G W++V K+R ++ ++G++K 
Sbjct: 544 RIHGQVEFGEYVAERLFELEPENS--GAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKV 601

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            GC+ I++ G V+ F   D+ HPQS  I+ ML+ +   +   G
Sbjct: 602 PGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETG 644



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 244/522 (46%), Gaps = 52/522 (9%)

Query: 19  PPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPH---LARQLFDSITR--PTTVIW 73
           P  P L QIHSL        T   +S+L + C          A  LF SI    P   IW
Sbjct: 36  PDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIW 95

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           NT+I        P  ++ L+SQM  S  Y   +++T+ S+ K+CA+++     K +H H 
Sbjct: 96  NTLIRAHSLTPTPTSSLHLFSQMLHSGLYP--NSHTFPSLFKSCAKSKATHEAKQLHAHA 153

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY-------------DLVC 180
           ++   +    V+ SL++MYS       A +V  K    D   +             D   
Sbjct: 154 LKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDAR 213

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD +  ++VV+WN +++ YV++ R+ EA+  F  M    + P+  + V+V  A   L 
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    +   +   G  +  +L + ++ + MY++ G    ARK+FD   +++  +WNTM
Sbjct: 274 SLELGKWIGSWVRDRG--FGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTM 331

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IGGY   +   EA+ LF +V+  + +  +DVTFL+ L A + L  LDLG+ +HAYI KN 
Sbjct: 332 IGGYCHLSLYEEALVLF-EVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNL 390

Query: 361 ------------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                                   V +   V  ++  R + SWN MIS    NG  +  L
Sbjct: 391 KGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERAL 450

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LID 453
            L  EM  +GF  D +T   +LSA +     ++G +  + + + +GI    ++ Y  +ID
Sbjct: 451 GLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGIS-PKLQHYGCMID 509

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           + A+SG    A+ +   N   + D A W +++     +G +E
Sbjct: 510 LLARSGKFDEAK-VLMGNMEMEPDGAIWGSLLNACRIHGQVE 550



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 202/427 (47%), Gaps = 39/427 (9%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           EG    AR+LFD I     V WN +I G+V +    EA+  +++M+++    S +  T  
Sbjct: 206 EGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEAD--VSPNQSTMV 263

Query: 112 SVLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SVL AC   R+L +GK +      R F    + V N+L++MYS C              E
Sbjct: 264 SVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV-NALVDMYSKC-------------GE 309

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           +  ++     K+FD M  ++V+ WNT++  Y     Y EA+  F +MLR  + P+ ++F+
Sbjct: 310 IGTAR-----KLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFL 364

Query: 231 NVFPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            V PA +SLG       V+  + K   G+  VN++ + +S I MYA+ GC + A ++F +
Sbjct: 365 AVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRS 424

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WN MI G   N H   A+ LF +++  +    DD+TF+  LSA +Q   ++L
Sbjct: 425 MGSRSLASWNAMISGLAMNGHAERALGLFEEMIN-EGFQPDDITFVGVLSACTQAGFVEL 483

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           G +  + + K++   P           +  +  MI    ++G  DE  +L+  M+ +   
Sbjct: 484 GHRYFSSMNKDYGISP----------KLQHYGCMIDLLARSGKFDEAKVLMGNMEMEP-- 531

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
            D     +LL+A       + G+     L        G    L ++YA +G      +I 
Sbjct: 532 -DGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIR 590

Query: 469 EK-NDSG 474
            K ND G
Sbjct: 591 TKLNDKG 597


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 210/689 (30%), Positives = 350/689 (50%), Gaps = 51/689 (7%)

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
            HC  I+   +   +  N++L+ Y+ C S       GL +           C +FD M  
Sbjct: 21  THCQTIKLGRSADIYATNNILSRYTRCSSG------GLTFA----------CNLFDEMSH 64

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           R+ V WNT++S YV +     A   ++ M   G+ P   +F ++   ++          V
Sbjct: 65  RDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQV 124

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L+VK+G  Y   ++  S+ + MYA+      A  +F     RN+  WN +I G+V   
Sbjct: 125 HSLIVKMG--YEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEG 182

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
               A  L ++ +E + +  DD TF   L+ + + +   L  QLH  IIK+ V     V 
Sbjct: 183 DHDTAFWL-LRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVC 241

Query: 369 NAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           NA I                      RD+V+WN+M++AF+ +   +    L  +MQ+ GF
Sbjct: 242 NATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGF 301

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMY--AKSGLIKTA 464
             D  T T ++SA S+   +D GK  H  +++ G+     + + +I MY  + S  ++ A
Sbjct: 302 EPDIYTYTTIISACSH---KDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDA 358

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +F   +S DR   +WN+++ G++Q G  E A   F  M    V  +    ++VL +C+
Sbjct: 359 LNVFHSMESKDR--VSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCS 416

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +  ++LG+Q+H  +++   + N FV +SLI MYSK G+I  A   F K  + +S+T+ +
Sbjct: 417 DLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNS 476

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           ++  Y QHG  + AL LF  M+   ++ D ITFVA L+ACS+ GLV++G  +   M  +Y
Sbjct: 477 IMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDY 536

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P  EHY C  D+ GR G + EA   ++ +  + + + +W +LLG+CR  G  ELA  
Sbjct: 537 GISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAM-VWKTLLGACRACGDIELAAQ 595

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           VA  LLE++        +V+LSN+Y     W+    + + MRER ++K  G SWI+V   
Sbjct: 596 VASHLLELEPEEHCT--YVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNE 653

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           V+ F + D+ H    +IY++LE+L  +++
Sbjct: 654 VHAFIADDRCHSHFEEIYQILEQLMEDIK 682



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 191/732 (26%), Positives = 323/732 (44%), Gaps = 113/732 (15%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T  I SR ++ C  G    A  LFD ++   TV WNT+I G+V +     A  LY  MK 
Sbjct: 37  TNNILSRYTR-CSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKS 95

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                  D YT+ S+LK  A    L +G+ VH   ++       +  ++LL+MY+ C   
Sbjct: 96  FGLMP--DAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERV 153

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            DA M                  VF  + RRN V+WN +++ +V    +  A    R M 
Sbjct: 154 RDAFM------------------VFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCME 195

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
             G+R    +F  +   L     YK    ++  ++K G ++ N   V ++ I  Y++ G 
Sbjct: 196 EEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNT--VCNATITSYSQCGS 253

Query: 279 FDFARKIFDNCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLS 335
            + A ++FD  +  R+   WN+M+  ++ ++    A +LF   L++ +  F  D  T+ +
Sbjct: 254 LEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLF---LDMQQFGFEPDIYTYTT 310

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------E 373
            +SA S     D G+ LH  +IK  +   V + NAVI                       
Sbjct: 311 IISACSH---KDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMES 367

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +D VSWN++++ F Q G  +  L L   M+     ID    +A+L + S+L    +G+Q 
Sbjct: 368 KDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQI 427

Query: 434 HAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           H   ++ G  FE    + S LI MY+K G+I+ AR+ FEK  +      TWN+++  Y Q
Sbjct: 428 HVLTVKSG--FESNDFVASSLIFMYSKCGMIEDARKSFEK--TAKDSSITWNSIMFAYAQ 483

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +G  + A   F QM +  V  + +T  + L AC+ +G +E G        RYLL      
Sbjct: 484 HGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQG--------RYLL------ 529

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
                    KS   +Y  +     P      Y   +  +G+ G  + A +L  SM     
Sbjct: 530 ---------KSMASDYGIS-----PRMEH--YACAVDLFGRAGYLDEAKALIESMP---F 570

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH--YCCVADMLGRVGKVVE 668
           +PDA+ +  +L AC   G ++   Q+        +++P  EH  Y  +++M G + +  E
Sbjct: 571 DPDAMVWKTLLGACRACGDIELAAQV---ASHLLELEPE-EHCTYVILSNMYGHLKRWDE 626

Query: 669 AYEFVKELGEEGNVLEIWG-----------SLLGSCRLHGH-SELAEVVAKKLLEMDTRN 716
               +  L  E  V ++ G           + +   R H H  E+ +++ + + ++   +
Sbjct: 627 K-ACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIKWLD 685

Query: 717 SMPGYHVLLSNI 728
           S+ G   LL ++
Sbjct: 686 SVAGSDSLLDDV 697


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/625 (32%), Positives = 328/625 (52%), Gaps = 47/625 (7%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           MLR G    +  +V +       G    A  ++G +VK G+    D+FVA+S +  Y   
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTS--ADMFVATSLVNAYMRC 126

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    AR +FD   E+N   W  +I GY  N+  +EA+E+FV++LE         T  + 
Sbjct: 127 GASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYP-SHYTLGAM 185

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERD 375
           L+A S     DLG Q+H Y IK + AL +                          V +++
Sbjct: 186 LNACSASNNADLGSQVHGYTIK-YRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKN 244

Query: 376 VVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           V++W TMISA  ++    + GL L  +M   G + +  T+T+++S      + ++GKQ  
Sbjct: 245 VITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQ 304

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           A+  + G      +++  + +Y + G    A + FE+ D  D    TWNAMI+GY Q  +
Sbjct: 305 AFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMD--DVSIITWNAMISGYAQ--I 360

Query: 494 LE-------------EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           +E             +A   FR +    + P++ T +S+L  C+ M  +E G+Q+H  +I
Sbjct: 361 METAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTI 420

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           +     +V V ++L++MY+K G I  A   F ++  +  VT+T+MI GY QHG  + A+ 
Sbjct: 421 KTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQ 480

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M+  G+ P+ ITFV VLSACSYAGL ++    FD+M++EYKI+P  +HY C+ DM 
Sbjct: 481 LFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMF 540

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
            R+G++ +A+ F++  G E N   IW SL+  CR HG+ ELA   A +L+E+  R     
Sbjct: 541 VRLGRLDDAFAFIRRTGFEPNE-AIWSSLVAGCRSHGNMELAFYAADRLIEL--RPKGIE 597

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            +VLL N+Y     W +V +VRK M++ GL   +  SWI +   V  F + D+ H  S +
Sbjct: 598 TYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDE 657

Query: 781 IYEMLERLAMEMRNAGNKTIQNSNV 805
           +Y++LE L  + +  G +  Q++ +
Sbjct: 658 LYQLLENLLEKAKTIGYEPYQSAEL 682



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 250/551 (45%), Gaps = 65/551 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L  C ET +L   +A+H H ++  ++   FV  SL+N Y  C +S DA        
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDAR------- 133

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       +FD M  +NVV W  +++ Y    + +EA+  F  ML  G  PS  + 
Sbjct: 134 -----------SLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTL 182

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  A S+  +      V+G  +K  +  +    + +S   MYA+ G  + A + F   
Sbjct: 183 GAMLNACSASNNADLGSQVHGYTIKYRALSITS--IGNSLCRMYAKSGSLESAMRAFRMV 240

Query: 290 LERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            ++N   W TMI    ++ +  E  + LF+ +L +D ++ ++ T  S +S      +L+L
Sbjct: 241 PDKNVITWTTMISACAEDENYTELGLTLFLDML-MDGVLPNEFTLTSVMSLCGTRLDLNL 299

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI-------ERD-------------VVSWNTMISAFVQ 388
           G+Q+ A+  K      + V N+ +       E D             +++WN MIS + Q
Sbjct: 300 GKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ 359

Query: 389 ---NGLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
                 DD        + L +   +++     D  T +++LS  S++   + G+Q HA  
Sbjct: 360 IMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQT 419

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   +  + S L++MY K G I+ A + F   +   R   TW +MI+GY+Q+G  +E
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEDATKAFV--EMSIRTLVTWTSMISGYSQHGRPQE 477

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTS 553
           A   F  M    V PN +T   VL AC+  G  E  K  H F +    Y ++  V     
Sbjct: 478 AIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE--KAEHYFDMMKEEYKIEPIVDHYGC 535

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           ++DM+ + G ++ A     +   E N   +++++ G   HG  E  L+ + + +   + P
Sbjct: 536 MVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADRLIELRP 593

Query: 613 DAI-TFVAVLS 622
             I T+V +L+
Sbjct: 594 KGIETYVLLLN 604



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 222/495 (44%), Gaps = 72/495 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR LFD +     V W  +I G+  N+   EA+ ++ +M ++  Y S  +YT  +
Sbjct: 127 GASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPS--HYTLGA 184

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC+ + N  +G  VH + I+  +     + NSL  MY+    SL++ M         
Sbjct: 185 MLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKS-GSLESAM--------- 234

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVN 231
                   + F  +  +NV+ W T++S   + E Y E  +  F  ML  G+ P+  +  +
Sbjct: 235 --------RAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTS 286

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V     +  D      V     K+G +   ++ V +S +++Y   G  D A + F+   +
Sbjct: 287 VMSLCGTRLDLNLGKQVQAFCFKIGCQ--TNIPVKNSTMYLYLRKGETDEAMRFFEEMDD 344

Query: 292 RNTEVWNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +   WN MI GY Q            +   +A+++F + L+   +  D  TF S LS  
Sbjct: 345 VSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVF-RNLKRSAMKPDLFTFSSILSVC 403

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
           S +  L+ G+Q+HA  IK      V+V +A++                     R +V+W 
Sbjct: 404 SSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWT 463

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-LLR 439
           +MIS + Q+G   E + L  +M+  G   + +T   +LSA S     +  K  H + +++
Sbjct: 464 SMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE--KAEHYFDMMK 521

Query: 440 HGIHFEGMESY---LIDMYAKSGLIKTA-----RQIFEKNDSGDRDQATWNAMIAGYTQN 491
                E +  +   ++DM+ + G +  A     R  FE N      +A W++++AG   +
Sbjct: 522 EEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPN------EAIWSSLVAGCRSH 575

Query: 492 GLLEEAFVAFRQMLE 506
           G +E AF A  +++E
Sbjct: 576 GNMELAFYAADRLIE 590



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 43/281 (15%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A + F+ +   + + WN +I G+              +  ++
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQ 376

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ ++  +K+S+     D +T+SS+L  C+    L  G+ +H   I+        V ++L
Sbjct: 377 ALKVFRNLKRSA--MKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSAL 434

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C    DA                   K F  M  R +V W +++S Y +  R  
Sbjct: 435 VNMYNKCGCIEDAT------------------KAFVEMSIRTLVTWTSMISGYSQHGRPQ 476

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           EA++ F  M   G+RP+ I+FV V  A S  G  + A+  + ++ +   EY  +  V   
Sbjct: 477 EAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKE---EYKIEPIVDHY 533

Query: 267 SSAIFMYAELG----CFDFARKIFDNCLERNTEVWNTMIGG 303
              + M+  LG     F F R+      E N  +W++++ G
Sbjct: 534 GCMVDMFVRLGRLDDAFAFIRR---TGFEPNEAIWSSLVAG 571


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 203/657 (30%), Positives = 348/657 (52%), Gaps = 60/657 (9%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           +N+++  Y  +    EA+  F  M+  GI P   +F     A +      +   ++GL+V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K+G  Y  DLFV +S +  YAE G  D ARK+FD   ERN   W +MI GY + +   +A
Sbjct: 162 KMG--YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
           ++LF +++  +E+  + VT +  +SA ++L++L+ G++++A+I  + + +  ++++A+++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

Query: 374 R-------DVVS-------------WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                   DV                N M S +V+ GL  E L +   M   G   D ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKND 472
           + + +S+ S LRN   GK  H Y+LR+G   ++ + + LIDMY K     TA +IF++  
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR-- 397

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN------------------------ 508
             ++   TWN+++AGY +NG ++ A+  F  M E N                        
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 509 --------VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
                   V  + VT+ S+  AC  +G ++L K ++ +  +  +  +V +GT+L+DM+S+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G    A ++F  +  ++   +T  I      G +ERA+ LF  M   G++PD + FV  
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L+ACS+ GLV +G +IF  M + + + P   HY C+ D+LGR G + EA + ++++  E 
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           N + IW SLL +CR+ G+ E+A   A+K+  +    +  G +VLLSN+YA  G W ++ K
Sbjct: 638 NDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT--GSYVLLSNVYASAGRWNDMAK 694

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           VR  M+E+GLRK  G S I + G  + F S D+ HP+   I  ML+ ++    + G+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 170/624 (27%), Positives = 293/624 (46%), Gaps = 97/624 (15%)

Query: 41  TIRSRLSKICQEGRPH---LARQLFD-SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           TI   +++ C+ G       A+++F+ S +  T  ++N++I G+  + L  EAILL+ +M
Sbjct: 66  TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             S    S D YT+   L ACA++R    G  +H   ++       FV NSL++ Y+ C 
Sbjct: 126 MNSG--ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC- 182

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FR 215
                        E+D ++     KVFD M  RNVV+W +++  Y + +   +AV   FR
Sbjct: 183 ------------GELDSAR-----KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           M+    + P++++ V V  A + L D ++ + VY  +   G E VNDL V S+ + MY +
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-VNDLMV-SALVDMYMK 283

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               D A+++FD     N ++ N M   YV+     EA+ +F  +++   +  D ++ LS
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLS 342

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------- 372
           A+S+ SQL+ +  G+  H Y+++N       + NA+I                       
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402

Query: 373 ----------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                       E+++VSWNT+IS  VQ  L +E + +   MQ 
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462

Query: 405 Q-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
           Q G   D VT+ ++ SA  +L   D+ K  + Y+ ++GI  +  + + L+DM+++ G  +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           +A  IF  N   +RD + W A I      G  E A   F  M+E  + P+ V     L A
Sbjct: 523 SAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 523 CNPMGNIELGKQ-------LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           C+  G ++ GK+       LHG S      ++V  G  ++D+  ++G++  A  +   +P
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVS-----PEDVHYGC-MVDLLGRAGLLEEAVQLIEDMP 634

Query: 576 -EKNSVTYTTMILGYGQHGMSERA 598
            E N V + +++      G  E A
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMA 658



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 241/570 (42%), Gaps = 77/570 (13%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH L   +   K   +++ L     E G    AR++FD ++    V W ++I G+   +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+ L+ +M +    T  ++ T   V+ ACA+  +L  G+ V+          +  +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTP-NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            ++L++MY  C                  +  D+  ++FD     N+   N + S YV+ 
Sbjct: 274 VSALVDMYMKC------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               EA+  F +M+  G+RP  IS ++   + S L +       +G +++ G E  +++ 
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375

Query: 265 VASSAIFM-----------------------------YAELGCFDFARKIFDNCLERNTE 295
            A   ++M                             Y E G  D A + F+   E+N  
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WNT+I G VQ +   EAIE+F  +   + +  D VT +S  SA   L  LDL + ++ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495

Query: 356 IIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           I KN + L V                     + N++  RDV +W   I A    G  +  
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME-SYLID 453
           + L  +M +QG   D V     L+A S+      GK+    +L+ HG+  E +    ++D
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR--QMLEHNVTP 511
           +  ++GL++ A Q+ E       D   WN+++A     G +E A  A    Q+L    T 
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPND-VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674

Query: 512 NVVTIASVLPAC---NPMGNIELGKQLHGF 538
           + V +++V  +    N M  + L  +  G 
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/597 (34%), Positives = 324/597 (54%), Gaps = 32/597 (5%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF-MYAELGCFDFA 282
           P   +F  +    ++  D  +   V+  L   G   +    +AS+A+  MY +      A
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARG---LASESIASTALANMYFKCRRPADA 70

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVTFLSALSAVS 341
           R++FD    R+   WN ++ GY +N  P  A+E  V++  E      D VT +S L A +
Sbjct: 71  RRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACA 130

Query: 342 QLQELDLGQQLHAYIIK----NFVALPVIVLNAVIE----------------RDVVSWNT 381
             + L   +++HA+ ++      V +   VL+A  +                R+ VSWN 
Sbjct: 131 DARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNA 190

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI  +  NG   E + L + M ++G  +   +V A L A   L   D  ++ H  L+R G
Sbjct: 191 MIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250

Query: 442 IHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD-QATWNAMIAGYTQNGLLEEAFV 499
           +     + + LI  YAK      A Q+F  N+ G++  + +WNAMI G+TQN   E+A  
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVF--NELGNKKTRISWNAMILGFTQNECPEDAER 308

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +M   NV P+  T+ SV+PA   + +    + +HG+SIR+ LDQ+V+V T+LIDMYS
Sbjct: 309 LFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYS 368

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G ++ A  +F    +++ +T+  MI GYG HG  + A+ LF  MKG G  P+  TF++
Sbjct: 369 KCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLS 428

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VL+ACS+AGLVDEG + F  M+++Y ++P  EHY  + D+LGR GK+ EA+ F+K +  E
Sbjct: 429 VLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
             +  ++G++LG+C+LH + ELAE  A+ + E+     +  YHVLL+NIYA    W++V 
Sbjct: 489 PGI-SVYGAMLGACKLHKNVELAEESAQIIFELGPEEGV--YHVLLANIYANASMWKDVA 545

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +VR  M ++GL+K  G S I +   V+ F S    H  +  IY  L +L  E+++ G
Sbjct: 546 RVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMG 602



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 243/508 (47%), Gaps = 54/508 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHF-IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           T++++LK CA   +L  G+AVH     R  ++ S     +L NMY  C    DA      
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASES-IASTALANMYFKCRRPADAR----- 71

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRMMLRMGIRP 224
                        +VFD M  R+ VAWN +V+ Y +       +EAV + +     G RP
Sbjct: 72  -------------RVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGE-EGGERP 117

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFAR 283
            +++ V+V PA +      +   V+   ++ G  E VN   V+++ +  Y + G  + AR
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVN---VSTAVLDAYCKCGAVEAAR 174

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD    RN+  WN MI GY  N +  EA+ LF ++++ + +   D + L+AL A  +L
Sbjct: 175 AVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQ-EGVDVTDASVLAALQACGEL 233

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTM 382
             LD  +++H  +++  ++  V V NA+I                     ++  +SWN M
Sbjct: 234 GYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAM 293

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I  F QN   ++   L   MQ +    DS T+ +++ A +++ +    +  H Y +RH +
Sbjct: 294 ILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL 353

Query: 443 HFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + + LIDMY+K G +  AR++F+   + DR   TWNAMI GY  +G  + A   F
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDS--ARDRHVITWNAMIHGYGSHGFGQAAVELF 411

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
            +M      PN  T  SVL AC+  G ++ G K        Y L+  +    +++D+  +
Sbjct: 412 EEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGR 471

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILG 588
           +G ++ A +    +P +  ++    +LG
Sbjct: 472 AGKLDEAWSFIKNMPIEPGISVYGAMLG 499



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 197/434 (45%), Gaps = 44/434 (10%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP  AR++FD +     V WN ++ G+  N LP  A+    +M+        D+ T  SV
Sbjct: 66  RPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSV 125

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA+ R L   + VH   +R   +    V  ++L+ Y  C +   A            
Sbjct: 126 LPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAAR----------- 174

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                   VFD M  RN V+WN ++  Y       EA+  F  M++ G+  +  S +   
Sbjct: 175 -------AVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAAL 227

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A   LG       V+ LLV++G    +++ V ++ I  YA+    D A ++F+    + 
Sbjct: 228 QACGELGYLDEVRRVHELLVRVG--LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKK 285

Query: 294 TEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           T + WN MI G+ QN  P +A  LF + ++L+ +  D  T +S + AV+ + +    + +
Sbjct: 286 TRISWNAMILGFTQNECPEDAERLFAR-MQLENVRPDSFTLVSVIPAVADISDPLQARWI 344

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H Y I++ +   V VL A+I                    +R V++WN MI  +  +G  
Sbjct: 345 HGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFG 404

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
              + L  EM+  G + +  T  ++L+A S+    D G++  A + +      GME Y  
Sbjct: 405 QAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGT 464

Query: 451 LIDMYAKSGLIKTA 464
           ++D+  ++G +  A
Sbjct: 465 MVDLLGRAGKLDEA 478



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 192/424 (45%), Gaps = 39/424 (9%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L   C+ G    AR +FD +    +V WN +I G+  N    EA+ L+ +M +       
Sbjct: 161 LDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEG--VDV 218

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            + +  + L+AC E   L   + VH   +R   + +  V N+L+  Y+ C          
Sbjct: 219 TDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKC---------- 268

Query: 166 LKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                    + DL  +VF+ +  ++  ++WN ++  + + E   +A R F  M    +RP
Sbjct: 269 --------KRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRP 320

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
            + + V+V PA++ + D   A  ++G  ++   +   D++V ++ I MY++ G    AR+
Sbjct: 321 DSFTLVSVIPAVADISDPLQARWIHGYSIR--HQLDQDVYVLTALIDMYSKCGRVSIARR 378

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD+  +R+   WN MI GY  +     A+ELF ++     +  ++ TFLS L+A S   
Sbjct: 379 LFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLP-NETTFLSVLAACSHAG 437

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ- 403
            +D GQ+  A + K++           +E  +  + TM+    + G  DE    +  M  
Sbjct: 438 LVDEGQKYFASMKKDY----------GLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPI 487

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
           + G  +      A+L A    +N ++ +++   +   G         L ++YA + + K 
Sbjct: 488 EPGISV----YGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKD 543

Query: 464 ARQI 467
             ++
Sbjct: 544 VARV 547


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 225/760 (29%), Positives = 385/760 (50%), Gaps = 64/760 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+  F++I + + V   T  +G     L Y  +    Q K     T+ D+  Y  + +  
Sbjct: 7   AKTFFNNIAQDSLVTLITKRVG-----LGYRFLSSLCQPKN----TALDSEGYKILFQTA 57

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++ ++ +GK  H H I+   NP  ++ N+LLNMY  C              E+ +++  
Sbjct: 58  AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCR-------------ELGFAR-- 102

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++FD M  RN++++N+++S Y +   Y +A+  F       ++    ++        
Sbjct: 103 ---QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              D    ++++GL+V  G      +F+ +  I MY++ G  D A  +FD C ER+   W
Sbjct: 160 ERCDLDLGELLHGLVVVNG--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-QLQE--LDLGQQLHA 354
           N++I GYV+     E + L  + +  D +        S L A    L E  ++ G  +H 
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAK-MHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ-----N 389
           Y  K  +   ++V  A+++                    ++VV++N MIS F+Q     +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGME 448
               E   L  +MQ++G      T + +L A S  +  + G+Q HA + ++     E + 
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S LI++YA  G  +   Q F    +  +D A+W +MI  + QN  LE AF  FRQ+   +
Sbjct: 397 SALIELYALMGSTEDGMQCFAS--TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           + P   T++ ++ AC     +  G+Q+ G++I+  +D    V TS I MY+KSG +  A 
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF ++   +  TY+ MI    QHG +  AL++F SMK  GI+P+   F+ VL AC + G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV +GL+ F  M+ +Y+I P+ +H+ C+ D+LGR G++ +A   +   G + + +  W +
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV-TWRA 633

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL SCR++  S + + VA++L+E++   S  G +VLL NIY + G   + ++VR+ MR+R
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEAS--GSYVLLHNIYNDSGVNSSAEEVRELMRDR 691

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           G++KE   SWI +G   + FA  D  HP S  IY MLE +
Sbjct: 692 GVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 251/551 (45%), Gaps = 55/551 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+      ARQLFD +     + +N++I G+       +A+ L+ + ++++     D +T
Sbjct: 93  CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN--LKLDKFT 150

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+  L  C E  +L +G+ +H   +    +   F+ N L++MYS C              
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC-------------- 196

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                K D    +FD    R+ V+WN+++S YV+     E +     M R G+  +T + 
Sbjct: 197 ----GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYAL 252

Query: 230 VNVFPALS---SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +V  A     + G  +    ++    KLG E+  D+ V ++ + MYA+ G    A K+F
Sbjct: 253 GSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF--DIVVRTALLDMYAKNGSLKEAIKLF 310

Query: 287 DNCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
                +N   +N MI G++Q     +    EA +LF+  ++   +     TF   L A S
Sbjct: 311 SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD-MQRRGLEPSPSTFSVVLKACS 369

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVIVLNAVI--------------ERDVVSWNT 381
             + L+ G+Q+HA I KN      F+   +I L A++              ++D+ SW +
Sbjct: 370 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 429

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI   VQN   +    L  ++       +  TV+ ++SA ++      G+Q   Y ++ G
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           I  F  +++  I MYAKSG +  A Q+F   +  + D AT++AMI+   Q+G   EA   
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSAMISSLAQHGSANEALNI 547

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           F  M  H + PN      VL AC   G +  G K        Y ++ N    T L+D+  
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLG 607

Query: 560 KSGVINYAANV 570
           ++G ++ A N+
Sbjct: 608 RTGRLSDAENL 618


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 218/763 (28%), Positives = 392/763 (51%), Gaps = 55/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYSSVLKA 116
           AR LFD +     V W T++     N   +EA+ L+  M  S     C N +T SS L++
Sbjct: 70  ARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSG---QCPNEFTLSSALRS 126

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+       G  +H   ++     +  +  +L+++Y+ C  +++                
Sbjct: 127 CSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPH-------------- 172

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               K+   ++  +VV+W T++S  V+T ++ EA++ +  M+  GI P+  +FV +    
Sbjct: 173 ----KLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMP 228

Query: 237 SSLGDYKS-ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           S LG  K    V++  L+  G E   +L + ++ I MYA+    + A K+     + +  
Sbjct: 229 SFLGLGKGYGKVLHSQLITFGVEM--NLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVC 286

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +W ++I G+VQN+   EA+   V  +EL  I+ ++ T+ S L+A S +  L+LG+Q H+ 
Sbjct: 287 LWTSIISGFVQNSQVREAVNALVD-MELSGILPNNFTYASLLNASSSVLSLELGEQFHSR 345

Query: 356 IIKNFVALPVIVLNAVIER---------------------DVVSWNTMISAFVQNGLDDE 394
           +I   +   + V NA+++                      +V+SW ++I+ F ++G ++E
Sbjct: 346 VIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEE 405

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            + L  EMQ  G   +S T++ +L A S +++    K+ H Y+++  +  +  + + L+D
Sbjct: 406 SVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVD 465

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            YA  G+   A  +    +   RD  T+  + A   Q G  E A      M    V  + 
Sbjct: 466 AYAGGGMADEAWSVIGMMN--HRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDE 523

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            ++AS + A   +G +E GKQLH +S +   ++   V  SL+  YSK G +  A  VF  
Sbjct: 524 FSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKD 583

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I E + V++  +I G   +G+   ALS F  M+  G++PD++TF++++ ACS   L+++G
Sbjct: 584 ITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQG 643

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  F  M++ Y I P  +HY C+ D+LGR G++ EA   ++ +  + + + I+ +LL +C
Sbjct: 644 LDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSV-IYKTLLNAC 702

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
            LHG+  L E +A++ LE+D  +  P  ++LL+++Y   G  +  DK RK MRERGLR+ 
Sbjct: 703 NLHGNVPLGEDMARRCLELDPCD--PAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRS 760

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
               W++V   +  F+++  E   + +I E LE L  E++N G
Sbjct: 761 PRQCWMEVKSKIYLFSAR--EKIGNDEINEKLESLITEIKNRG 801



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 303/628 (48%), Gaps = 71/628 (11%)

Query: 97  KKSSPYTSCD-NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           K S+ ++ C    T   VL  C  ++ L+ G  VH   I+       ++ N+LL +Y+ C
Sbjct: 6   KVSNSFSPCRFRETCLQVLSLC-NSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKC 64

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                A                    +FD M  R+VV+W T++S + + + + EA++ F 
Sbjct: 65  FGVGQAR------------------HLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFD 106

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           MML  G  P+  +  +   + S+LG+++    ++  +VKLG E  + L   ++ + +Y +
Sbjct: 107 MMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVL--GTTLVDLYTK 164

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
             C     K+     + +   W TMI   V+ +   EA++L+V+++E   I  ++ TF+ 
Sbjct: 165 CDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAG-IYPNEFTFVK 223

Query: 336 ALSAVSQLQ-ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
            L   S L      G+ LH+ +I   V + +++  A+I                    + 
Sbjct: 224 LLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKY 283

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DV  W ++IS FVQN    E +  + +M+  G + ++ T  +LL+A+S++ + ++G+Q H
Sbjct: 284 DVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFH 343

Query: 435 AYLLRHGIHFEG---MESYLIDMYAK-----SGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           + ++  G+  EG   + + L+DMY K     +  +K  R I   N        +W ++IA
Sbjct: 344 SRVIMVGL--EGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPN------VISWTSLIA 395

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           G+ ++G  EE+   F +M    V PN  T++++L AC+ M +I   K+LHG+ I+  +D 
Sbjct: 396 GFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDI 455

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           ++ VG +L+D Y+  G+ + A +V   +  ++ +TYTT+     Q G  E AL +   M 
Sbjct: 456 DMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMC 515

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML----GR 662
              ++ D  +  + +SA +  G+++ G Q+       Y  +   E    V++ L     +
Sbjct: 516 NDEVKMDEFSLASFISAAAGLGIMETGKQL-----HCYSFKSGFERCNSVSNSLVHSYSK 570

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            G + +AY   K++ E   V   W  L+
Sbjct: 571 CGSMRDAYRVFKDITEPDRV--SWNGLI 596


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 178/486 (36%), Positives = 283/486 (58%), Gaps = 31/486 (6%)

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------------- 373
           +S L A +   ++ LG+ +H   +K  V       N +++                    
Sbjct: 2   VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           R VV+W ++I+A+ + GL DE + L +EM ++G   D  T+T +L A +   + + GK  
Sbjct: 62  RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121

Query: 434 HAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y+  + +     + + L+DMYAK G ++ A  +F +     +D  +WN MI GY++N 
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV--KDIISWNTMIGGYSKNS 179

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFV 550
           L  EA   F  M+   + P+  T+A +LPAC  + +++ GK++HG  +R  +  DQ V  
Sbjct: 180 LPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQV-- 236

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +L+DMY K GV   A  +F  IP K+ +T+T MI GYG HG    A++ F  M+  GI
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           EPD ++F+++L ACS++GL+DEG + F++MQ E  ++P  EHY C+ D+L R GK+  AY
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +F+K +  E +   IWG+LL  CR+H   +LAE VA+ + E++  N+  GY+VLL+N YA
Sbjct: 357 KFIKSMPIEPDA-TIWGALLSGCRIHHDVKLAEKVAEHVFELEPENT--GYYVLLANTYA 413

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
           E   WE V K+R+++  RGL+K  GCSWI+V   V+ F + +  HPQ+ KI  +L+RL  
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRS 473

Query: 791 EMRNAG 796
           +M+  G
Sbjct: 474 KMKEEG 479



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 190/410 (46%), Gaps = 69/410 (16%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S+L+ACA   ++ +G+AVH   ++   +      N+LL+MY+ C   LD  ++       
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKC-GVLDGAIL------- 54

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                     VFD M  R VV W ++++ Y +     EA+R F  M R G+ P   +   
Sbjct: 55  ----------VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITT 104

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A +  G  ++   V+  + +  ++  +++FV ++ + MYA+ G  + A  +F     
Sbjct: 105 VLHACACNGSLENGKDVHNYIRE--NDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV 162

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQ-VLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ++   WNTMIGGY +N+ P EA+ LF   VLE+     D  T    L A + L  LD G+
Sbjct: 163 KDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKP---DGTTLACILPACASLASLDRGK 219

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++H +I++N       V NA+++                    +D+++W  MI+ +  +G
Sbjct: 220 EVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHG 279

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF------ 444
             +  +    EM++ G   D V+  ++L A S           H+ LL  G  F      
Sbjct: 280 FGNNAITTFNEMRQAGIEPDEVSFISILYACS-----------HSGLLDEGWRFFNVMQD 328

Query: 445 -----EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                  +E Y  ++D+ A+SG +  A + F K+   + D   W A+++G
Sbjct: 329 ECNVKPKLEHYACIVDLLARSGKLAMAYK-FIKSMPIEPDATIWGALLSG 377



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 24/292 (8%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +FD ++  T V W ++I  +    L  EAI L+ +M +     S D +T ++VL ACA  
Sbjct: 55  VFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG--VSPDIFTITTVLHACACN 112

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            +L  GK VH +        + FV N+L++MY+ C S  DA                   
Sbjct: 113 GSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDAN------------------ 154

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VF  M  +++++WNT++  Y K     EA+  F  M+ + ++P   +   + PA +SL 
Sbjct: 155 SVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLA 213

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  V+G +++ G  + +D  VA++ + MY + G    AR +FD    ++   W  M
Sbjct: 214 SLDRGKEVHGHILRNG--FFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           I GY  +     AI  F ++ +   I  D+V+F+S L A S    LD G + 
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAG-IEPDEVSFISILYACSHSGLLDEGWRF 322



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 1/161 (0%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S+L AC   G++ LG+ +HG  ++  +        +L+DMY+K GV++ A  VF  + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            +  VT+T++I  Y + G+S+ A+ LF  M   G+ PD  T   VL AC+  G ++ G  
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           + + + +E  +Q +      + DM  + G + +A     E+
Sbjct: 121 VHNYI-RENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM 160



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 23/184 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKA 116
           A  +F  +     + WNT+I G+  N+LP EA+ L+  M  +  P    D  T + +L A
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKP----DGTTLACILPA 208

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA   +L  GK VH H +R      + V N+L++MY  C   + A +             
Sbjct: 209 CASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARL------------- 255

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +FD +  ++++ W  +++ Y        A+  F  M + GI P  +SF+++  A 
Sbjct: 256 -----LFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYAC 310

Query: 237 SSLG 240
           S  G
Sbjct: 311 SHSG 314


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 240/824 (29%), Positives = 401/824 (48%), Gaps = 86/824 (10%)

Query: 10  LPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITR-- 67
           +PP PP A              P +  L    + S LS      RP  A +L  + +   
Sbjct: 1   MPPTPPLAALHRFLASPSPPPLPSLLTLHALAVTSGLSP-----RPDFAAKLVSAYSSAG 55

Query: 68  --------------PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
                         P   +WN+++      +     +  + +M+ S    S   +T   V
Sbjct: 56  LPALAALAFAASPCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPS--RFTAPLV 113

Query: 114 LKACAETRNLRIGKAVHCHFIR---CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
             A AE   L +G AVH + +R      + S  V +SL+ MY+ C S  DA         
Sbjct: 114 ASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA--------- 164

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPST 226
                     ++FD M  R+VVAW  ++S  V   +  E +     M+R     G RP++
Sbjct: 165 ---------VRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNS 215

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  +   A   LG+      ++G  VK G  +     V SS   MY +    + AR +F
Sbjct: 216 RTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS--VVSSLFSMYTKCDSTEDARILF 273

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
               E++   W ++IG Y +  H  +A+ELF+  +E   +  D+V     L+ +    ++
Sbjct: 274 PELPEKDLVSWTSLIGAYCRAGHAEKAVELFLG-MEESGLQPDEVVISCLLAGLGNDAKV 332

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
             G+  HA I++      V++ NA+I                    +RD  SW++M+ A+
Sbjct: 333 RGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAY 392

Query: 387 VQNGLDDEGLMLVYEMQ---KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GI 442
            + GLD + L L  EMQ   K  F  D+ ++ +++S+ S L    +G+  H Y ++H   
Sbjct: 393 CKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAG 452

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
               + + LI MY + G    AR+IF    +  +D  TW+A+I+ Y+  G  ++A + + 
Sbjct: 453 ENSSVANALISMYGRCGNFDVARKIFGMVKT--KDVVTWSALISSYSHLGHSKDALLLYD 510

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           QML   V PN  T+ SV+ +C  +  +E G+ +H       L+ ++ + T+L+DMY K G
Sbjct: 511 QMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCG 570

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A  +F  + E++ VT+  MI GYG HG + +AL LF  M+   ++P+++TF+A+LS
Sbjct: 571 QLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILS 630

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           AC +AGLVD+G ++F  M +EY ++P+ +HY C+ D+LG+ G + EA + V  +  E + 
Sbjct: 631 ACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDG 689

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LLG+C++H + E+   VAKK    D  N   GY++L+SN Y     W  ++K+R
Sbjct: 690 -GIWGTLLGACKMHDNFEMGLRVAKKAFASDPEND--GYYILMSNSYGSAEKWNEIEKLR 746

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
             M+  G+ K +G S ID+ G++     K+Q     H ++E  E
Sbjct: 747 DMMKNHGVEKSIGWSTIDICGFM-----KNQLTQWQHSLFEQSE 785


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 188/555 (33%), Positives = 299/555 (53%), Gaps = 63/555 (11%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W ++I  Y  +  P +++  F+ +L    +  D   F S L + + L +L+LG+ LH YI
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLA-SGLYPDHNVFPSVLKSCALLMDLNLGESLHGYI 132

Query: 357 IKNFVALPVIVLNAVI-------------------------------------------- 372
           I+  +   +   NA++                                            
Sbjct: 133 IRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSV 192

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                   E+D+VSWNT+I+   +NGL +E L ++ EM       DS T++++L   +  
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   GK+ H   +R G+  +  + S LIDMYAK   +  + ++F      +RD  +WN+
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL--LTERDGISWNS 310

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +IAG  QNGL +E    FRQML   + P   + +S++PAC  +  + LGKQLHG+  R  
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D+N+F+ +SL+DMY+K G I  A  +F ++  ++ V++T MI+G   HG +  A+ LF 
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  GI+P+ + F+AVL+ACS+ GLVDE  + F+ M +++ I P  EHY  V+D+LGR 
Sbjct: 431 QMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 490

Query: 664 GKVVEAYEFV--KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           G++ EAY+F+    +G  G+   IW +LL +CR+H + ++AE VA ++LE+D  N+  G 
Sbjct: 491 GRLEEAYDFICGMHIGPTGS---IWATLLSACRVHXNIDMAEKVANRILEVDPNNT--GA 545

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           ++LL+NIY+    W+   K R  MR  G+RK   CSWI+V   V  F + D+ HP   KI
Sbjct: 546 YILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKI 605

Query: 782 YEMLERLAMEMRNAG 796
            E +E L   M   G
Sbjct: 606 REAMEVLVELMEKEG 620



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 196/402 (48%), Gaps = 39/402 (9%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H + +LF++I  P  + W ++I  +  + LP++++  +  M  S  Y   D+  + SVLK
Sbjct: 57  HDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYP--DHNVFPSVLK 114

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSLDAEMVGLKYV---- 169
           +CA   +L +G+++H + IR   +   +  N+L+NMYS    L     + +G   V    
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174

Query: 170 --------EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                    V     D V K+F+ M  +++V+WNTI++   +   Y E +R  R M    
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++P + +  +V P ++   D      ++G  ++ G +   D++VASS I MYA+      
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD--ADIYVASSLIDMYAKCTRVAD 292

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           + ++F    ER+   WN++I G VQN    E +  F Q+L + +I     +F S + A +
Sbjct: 293 SCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSYSFSSIMPACA 351

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNT 381
            L  L LG+QLH YI +N      F+A  ++              + + +  RD+VSW  
Sbjct: 352 HLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTA 411

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
           MI     +G   + + L  +M+ +G   + V   A+L+A S+
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSH 453



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 188/403 (46%), Gaps = 58/403 (14%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F+T+     +AW +++  Y       +++  F  ML  G+ P    F +V  + + L 
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--------------------- 279
           D    + ++G ++++G ++  DL+  ++ + MY++L                        
Sbjct: 121 DLNLGESLHGYIIRVGLDF--DLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERT 178

Query: 280 -----------DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
                      D  RKIF+   E++   WNT+I G  +N    E + + ++ +    +  
Sbjct: 179 RSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM-IREMGGANLKP 237

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VL 368
           D  T  S L  +++  ++  G+++H   I+       +VA  +I              V 
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
             + ERD +SWN++I+  VQNGL DEGL    +M        S + ++++ A ++L    
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +GKQ H Y+ R+G      + S L+DMYAK G I+TA+QIF++     RD  +W AMI G
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL--RDMVSWTAMIMG 415

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
              +G   +A   F QM    + PN V   +VL AC+  G ++
Sbjct: 416 CALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVD 458



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 184/403 (45%), Gaps = 57/403 (14%)

Query: 349 GQQLHAYIIK-------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
            QQLHA ++K                   N +   + + N +     ++W ++I  +  +
Sbjct: 25  AQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           GL  + L     M   G   D     ++L + + L + ++G+  H Y++R G+ F+    
Sbjct: 85  GLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144

Query: 449 SYLIDMYAKSGLIK--------------------------------TARQIFEKNDSGDR 476
           + L++MY+K   ++                                + R+IFE     ++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP--EK 202

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WN +IAG  +NGL EE     R+M   N+ P+  T++SVLP      +I  GK++H
Sbjct: 203 DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           G SIR  LD +++V +SLIDMY+K   +  +  VF  + E++ +++ ++I G  Q+G+ +
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD 322

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
             L  FR M    I+P + +F +++ AC++   +  G Q+   + +      +      +
Sbjct: 323 EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSL 381

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
            DM  + G +  A +    +     V   W +++  C LHG +
Sbjct: 382 VDMYAKCGNIRTAKQIFDRMRLRDMV--SWTAMIMGCALHGQA 422



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 37/316 (11%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           V ALL    +++++   +Q HA +L+         S L+ +Y+   L+  + ++F  N  
Sbjct: 9   VKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLF--NTI 66

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                  W ++I  YT +GL  ++  +F  ML   + P+     SVL +C  + ++ LG+
Sbjct: 67  HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGE 126

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSK------SGVINYAA------------------- 568
            LHG+ IR  LD +++ G +L++MYSK      SG     A                   
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186

Query: 569 -------NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
                   +F  +PEK+ V++ T+I G  ++G+ E  L + R M G  ++PD+ T  +VL
Sbjct: 187 LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
              +    +  G +I     ++  +         + DM  +  +V ++      L E   
Sbjct: 247 PLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDG 305

Query: 682 VLEIWGSLLGSCRLHG 697
           +   W S++  C  +G
Sbjct: 306 I--SWNSIIAGCVQNG 319



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 24/183 (13%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKAC 117
           ++F  +T    + WN+II G V N L  E +  + QM   K  P     +Y++SS++ AC
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKP----KSYSFSSIMPAC 350

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L +GK +H +  R   + + F+ +SL++MY+ C +   A+               
Sbjct: 351 AHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAK--------------- 395

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++FD MR R++V+W  ++       +  +A+  F  M   GI+P+ ++F+ V  A S
Sbjct: 396 ---QIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452

Query: 238 SLG 240
             G
Sbjct: 453 HGG 455


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 222/724 (30%), Positives = 372/724 (51%), Gaps = 73/724 (10%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           +EA   Y QMKK+    + D     S+LKAC+ +  +R GK++H   ++   +      N
Sbjct: 31  WEACSRYHQMKKAGAQLT-DPTLVHSILKACS-SLPVRHGKSIHASLLKQGFDSLTSTGN 88

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           S  + Y             +K   +D + +     VFD+MR R+ V+WN ++  ++    
Sbjct: 89  SXXDFY-------------MKTGALDSALF-----VFDSMRSRDSVSWNIMIHGHLSRGA 130

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
               +  FR    +   P+  + V    A  SLG  +    ++G +++ G  +++   V 
Sbjct: 131 SDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSG--FLDIPSVQ 188

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S + MYA+    + A ++FD   ER+   W+ MIGGYVQ      A++LF+++     I
Sbjct: 189 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXI 247

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------- 373
             D +T +S L A +   ++ +G+ +H  +I   +   + V N++I+             
Sbjct: 248 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFK 307

Query: 374 -------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
                  R+ VSWN++IS  V+     E L L Y M K GF  D VT+  LL +     +
Sbjct: 308 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 367

Query: 427 QDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               K  H+ ++R G    E + + LID Y+K  LI+ A ++F++  +  +D  +W+AMI
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKT--KDTVSWSAMI 425

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           AG+   G  +EA   F++M +    PN VTI S+L A +   +++  K  HG  IR  L 
Sbjct: 426 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLA 485

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             V VGT+++DMY+K G I  +   F +IPEKN V++  MI   G +G++  AL+L   M
Sbjct: 486 AEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEM 545

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           K  G++P+ +T ++VLSACS+ GLV+EGL  F+ M Q++ ++P  EHY C+ DML R GK
Sbjct: 546 KLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGK 605

Query: 666 VVEAYEFVKELGEE-GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  A   ++++ E   +   +WG+LL +CR  G+S L    A ++L ++ ++S  GY  L
Sbjct: 606 LNXAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSS-AGY-FL 663

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
            S++YA  G     DK                +W        RF + D+ HP++ +I+ +
Sbjct: 664 ASSMYAASGLVHVEDK----------------AW--------RFVAGDESHPRAGEIWGV 699

Query: 785 LERL 788
           +E+L
Sbjct: 700 VEQL 703



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 229/480 (47%), Gaps = 47/480 (9%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L  P++++ L  +  +     A +LFD +     + W+ +I G+V       A+ L+ +M
Sbjct: 182 LDIPSVQNSLLSMYADNDMERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEM 241

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             S+     D  T  SVLKACA T ++ +G++VH   I    +   FV NS+++MYS   
Sbjct: 242 -XSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSK-- 298

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                              ++   K F+ M  RN V+WN+I+S  V+TE++ EA+  F  
Sbjct: 299 ----------------XDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYS 342

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M + G R   ++ VN+  +     D      ++ ++++ G E +N+ FV +S I  Y++ 
Sbjct: 343 MGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE-LNE-FVINSLIDAYSKC 400

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
              + A K+FD    ++T  W+ MI G+     P EAI LF ++ +  E   + VT LS 
Sbjct: 401 DLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKP-NGVTILSL 459

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L A S   +L   +  H   I+  +A  V V  A++                    E+++
Sbjct: 460 LEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNI 519

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSW  MI+A   NGL  + L L+ EM+  G   + VT  ++LSA S+    + G      
Sbjct: 520 VSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 437 LLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQAT-WNAMIAGYTQNG 492
           +++ HG+   G+E Y  ++DM  ++G +  A  + EK     RD A  W A+++    +G
Sbjct: 580 MVQDHGVE-PGLEHYSCMVDMLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSACRSSG 638


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 204/633 (32%), Positives = 333/633 (52%), Gaps = 51/633 (8%)

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
           V++   ML  G    +  +V +       G   +A  V+G + K G+    D+FVA+S +
Sbjct: 63  VQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGAS--ADMFVATSLV 120

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
             Y        AR++FD   ERN   W  ++ GY  N+ P   +E+FV++LE+       
Sbjct: 121 NAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SH 179

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------ 372
            T  + L+A     ++DLG+Q+H Y IK        + N++                   
Sbjct: 180 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 239

Query: 373 --ERDVVSWNTMISAFVQNGLDDE----GLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
             E++V++W TMISA  +   D+E    G+ L  +M   G M +  T+T+++S      +
Sbjct: 240 IPEKNVITWTTMISACAE---DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLD 296

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            ++GKQ  A+  + G      +++  + +Y + G    A ++FE+ +  D    TWNAMI
Sbjct: 297 LNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME--DASIITWNAMI 354

Query: 486 AGYTQ-------------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           +GY Q              G   +A   FR +    + P++ T +S+L  C+ M  +E G
Sbjct: 355 SGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +Q+H  +I+     +V V ++L++MY+K G I  A   F ++P +  VT+T+MI GY QH
Sbjct: 413 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 472

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G  + A+ LF  M+  G+ P+ ITFV++LSACSYAGLV+E    FD+M++EY I+P  +H
Sbjct: 473 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 532

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ DM  R+G+V +A+ F+K  G E N   IW SL+  CR HG+ ELA   A KLLE+
Sbjct: 533 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNE-AIWSSLVAGCRSHGNMELAFYAADKLLEL 591

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
             +      ++LL N+Y     W++V +VRK M++  +      SWI +   V  F + D
Sbjct: 592 KPKGIET--YILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRAND 649

Query: 773 QEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           + HPQ+ ++Y++LE L  + +  G +  QN+ +
Sbjct: 650 RTHPQATELYQLLENLLEKAKAIGYEPYQNAEL 682



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 262/572 (45%), Gaps = 65/572 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L  C ET +L   +AVH H  +  ++   FV  SL+N Y  C ++ DA        
Sbjct: 81  YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDAR------- 133

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      ++FD M  RNVV W  +V+ Y    +    +  F  ML MG  PS  + 
Sbjct: 134 -----------RLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTL 182

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
                A  +  D      V+G  +K G+E +  +   +S   +YA+LG  D A + F   
Sbjct: 183 GATLNACLASCDVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRI 240

Query: 290 LERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            E+N   W TMI    ++   VE  + LF+ +L +D ++ ++ T  S +S      +L+L
Sbjct: 241 PEKNVITWTTMISACAEDEECVELGMSLFIDML-MDGVMPNEFTLTSVMSLCGTRLDLNL 299

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+Q+ A+  K      + V N+ +                    +  +++WN MIS + Q
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359

Query: 389 ---NGLDD--------EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
              +  DD        + L +  ++++     D  T +++LS  S +   + G+Q HA  
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           ++ G   +  + S L++MY K G I+ A + F +  +  R   TW +MI+GY+Q+G  +E
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT--RTFVTWTSMISGYSQHGQPQE 477

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTS 553
           A   F +M    V PN +T  S+L AC+  G +E  +  H F +    Y ++  V     
Sbjct: 478 AIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGC 535

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +IDM+ + G +  A +   +   E N   +++++ G   HG  E  L+ + + K   ++P
Sbjct: 536 MIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADKLLELKP 593

Query: 613 DAI-TFVAVLSACSYAGLVDEGLQIFDLMQQE 643
             I T++ +L+         +  ++  LM+QE
Sbjct: 594 KGIETYILLLNMYISTERWQDVARVRKLMKQE 625



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 225/502 (44%), Gaps = 82/502 (16%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C   R   AR+LFD +     V W  ++ G+  N+ P   + ++ +M +   Y S  +YT
Sbjct: 126 CSAARD--ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS--HYT 181

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
             + L AC  + ++ +GK VH + I+  +     + NSL ++Y+  L SLD+ +      
Sbjct: 182 LGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAK-LGSLDSAL------ 234

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTIS 228
                      + F  +  +NV+ W T++S   + E  VE  +  F  ML  G+ P+  +
Sbjct: 235 -----------RAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFT 283

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             +V     +  D      V     K+G E   +L V +S +++Y   G  D A ++F+ 
Sbjct: 284 LTSVMSLCGTRLDLNLGKQVQAFSFKIGCE--TNLPVKNSTMYLYLRKGETDEAMRLFEQ 341

Query: 289 CLERNTEVWNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + +   WN MI GY Q            +   +A+ +F + L+   +  D  TF S L
Sbjct: 342 MEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF-RDLKRSVMKPDLFTFSSIL 400

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVV 377
           S  S +  L+ G+Q+HA  IK+     V+V +A++                     R  V
Sbjct: 401 SVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFV 460

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           +W +MIS + Q+G   E + L  EM+  G   + +T  +LLSA S           +A L
Sbjct: 461 TWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS-----------YAGL 509

Query: 438 LRHGIHFEGM-----------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           +    H+  M           + Y  +IDM+ + G ++ A   F K    + ++A W+++
Sbjct: 510 VEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS-FIKRTGFEPNEAIWSSL 568

Query: 485 IAGYTQNGLLEEAFVAFRQMLE 506
           +AG   +G +E AF A  ++LE
Sbjct: 569 VAGCRSHGNMELAFYAADKLLE 590



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 43/281 (15%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A +LF+ +   + + WN +I G+              +  ++
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ ++  +K+S      D +T+SS+L  C+    L  G+ +H   I+        V ++L
Sbjct: 377 ALTIFRDLKRS--VMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 434

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C    DA                   K F  M  R  V W +++S Y +  +  
Sbjct: 435 VNMYNKCGCIQDAN------------------KAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           EA++ F  M   G+RP+ I+FV++  A S  G  + A+  + ++ K   EY  +  V   
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK---EYCIEPVVDHY 533

Query: 267 SSAIFMYAELG----CFDFARKIFDNCLERNTEVWNTMIGG 303
              I M+  LG     F F ++      E N  +W++++ G
Sbjct: 534 GCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAG 571


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 208/707 (29%), Positives = 361/707 (51%), Gaps = 54/707 (7%)

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLDAEMVGLKYVEV 171
           C+  R L +G  VH H +   S     V N++LN     MY  C +   A +V       
Sbjct: 48  CSRLRALCLGCLVHRHLLA--SPDPNLVRNTVLNNHLITMYGRCAAPESARLV------- 98

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                      FD M  +N V+W ++++ + +  R  +A+  F  MLR G  P   +  +
Sbjct: 99  -----------FDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGS 147

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A + LGD      V+   +K  SE  +DL V ++ + MY++ G       +F    E
Sbjct: 148 TVRACAELGDIGVGRQVHAQAMK--SENGSDLIVQNALVTMYSKSGLVADGFLLFGRMRE 205

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           ++   W ++I G+ Q    +EA+++F +++       ++  F S  SA   L  L+ G+Q
Sbjct: 206 KDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQ 265

Query: 352 LHAYIIK------NFVALPVIVLNAVIER--------------DVVSWNTMISAFVQNGL 391
           +H+  +K      ++    +  + A  ++              D+VSWN++I+A    GL
Sbjct: 266 IHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGL 325

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
             E ++L+ EM+  G   D +TV  LL A         G+  H+YL++ G+  +  + + 
Sbjct: 326 LSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNS 385

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           L+ MYA+     +A  +F  +++ DRD  TWN+++    Q+  LE  F  F  +     +
Sbjct: 386 LLSMYARCMDFSSAMDVF--HETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPS 443

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            + +++ +VL A   +G  E+ KQ+H  + +  L  +  +   LID Y+K G ++ A  +
Sbjct: 444 LDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKL 503

Query: 571 FAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           F  +   + V +++++I+GY Q G   +AL LF  M+  G+ P+ +TFV VL+ACS  GL
Sbjct: 504 FEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGL 563

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VDEG   + +M+ E+ + P+ EH  CV D+L R G++ EA +FV ++  E +++ +W +L
Sbjct: 564 VDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIV-MWKTL 622

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L   + H   E+    A+ +L +D  +S    +VLL NIY+  G+W    +++K MR  G
Sbjct: 623 LAGSKTHNDVEMGRRAAEGILNIDPSHSAA--YVLLCNIYSASGDWNEFARLKKAMRSSG 680

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++K  G SW+ + G +  F  +D+ HP+S +IY MLE + MEM  AG
Sbjct: 681 VKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGMEMIKAG 727



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 284/605 (46%), Gaps = 63/605 (10%)

Query: 28  HSLSPPIPKLKTPTIRSRLSKICQEGR---PHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           H L+ P P L   T+ +    I   GR   P  AR +FD +     V W ++I     N 
Sbjct: 63  HLLASPDPNLVRNTVLNN-HLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNR 121

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+ L+S M +S   T+ D +   S ++ACAE  ++ +G+ VH   ++  +     V
Sbjct: 122 RSTDALGLFSSMLRSG--TAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIV 179

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+L+ MYS   S L A+   L                F  MR ++ ++W +I++ + + 
Sbjct: 180 QNALVTMYSK--SGLVADGFLL----------------FGRMREKDPISWGSIIAGFAQQ 221

Query: 205 ERYVEAVRQFRMMLRMGI-RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
              +EA++ FR M+  G+  P+   F +VF A   LG  +  + ++ L VK   ++  + 
Sbjct: 222 GCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDH--NS 279

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           +   S   MYA     + A+++F      +   WN++I          EA+ L  + +  
Sbjct: 280 YAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSE-MRG 338

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
             +  D +T    L A      +  G+ +H+Y++K  +   V V N+++           
Sbjct: 339 SGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSS 398

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                    +RDVV+WN++++A VQ+   +    L   +Q+    +D +++  +LSA++ 
Sbjct: 399 AMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAE 458

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           L   ++ KQ H    + G+  + M S  LID YAK G +  A ++FE   + + D  +W+
Sbjct: 459 LGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGT-NSDVFSWS 517

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           ++I GY Q+G   +A   F +M    V PN VT   VL AC+ +G ++ G   + +SI  
Sbjct: 518 SLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEG--CYYYSI-- 573

Query: 543 LLDQNVFVGT-----SLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG--- 593
           +  ++  + T      +ID+ +++G +  AA    ++P E + V + T++ G   H    
Sbjct: 574 MEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVE 633

Query: 594 MSERA 598
           M  RA
Sbjct: 634 MGRRA 638


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 199/641 (31%), Positives = 343/641 (53%), Gaps = 75/641 (11%)

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPS 141
           +NL  EAI  Y  M  S    S D+Y +  VLKA    ++L +GK +H H ++  + + S
Sbjct: 55  SNLFREAISTYVDMILSG--VSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSS 112

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             + NSL+N Y  C                  S+ D V KVFD +  R++V+WN+++S +
Sbjct: 113 VAIANSLVNFYGKC------------------SELDDVYKVFDRINERDLVSWNSLISAF 154

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV---VYGLLVKLG-- 256
            + + +  A+  FR ML   + PS+ + V+   A S+L  ++   +   ++G   + G  
Sbjct: 155 CRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHW 214

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
           S + N+  +      MYA LG  D A+ +F    +RN   WNTMI  + QN   VEA+ +
Sbjct: 215 STFTNNALMT-----MYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEAL-M 268

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------FVALPVI--- 366
            ++ + L+ +  D VT  S L A S L+ L  G+++HAY +++       FV   ++   
Sbjct: 269 SLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMY 328

Query: 367 -----------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTV 414
                      V + ++ER    WN MI+ + QN  D++ LML  EM    G   ++ T+
Sbjct: 329 CNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTM 388

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDS 473
            +++ A++   +    +  H Y+++  +  +  +++ L+DMY++   ++ ++ IF+  + 
Sbjct: 389 ASIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEV 448

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-------------VTPNVVTIASVL 520
             RD  +WN MI GY  +G   +A +   +M   N               PN +T+ +VL
Sbjct: 449 --RDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVL 506

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
           P C  +  +  GK++H +++R  L   V VG++L+DMY+K G +N +  VF ++P KN +
Sbjct: 507 PGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVI 566

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCG-----IEPDAITFVAVLSACSYAGLVDEGLQ 635
           T+  +++ YG HG  E AL LF+ M   G     ++P  +T +A+L+ACS++G+VDEGL+
Sbjct: 567 TWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLK 626

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           +F  M+ ++ I+P  +HY CVAD+LGR GKV +AY+F+  +
Sbjct: 627 LFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINTM 667



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 262/526 (49%), Gaps = 82/526 (15%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL------LYSQMKKSSPYTSCDNYTYSSV 113
           ++FD I     V WN++I  F C    +E  L      L   ++ SS       +T  S 
Sbjct: 134 KVFDRINERDLVSWNSLISAF-CRAQEWELALEAFRFMLAEDLEPSS-------FTLVSP 185

Query: 114 LKACAETRN---LRIGKAVHCHFIRCFSNP--SRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           + AC+  R    LR+GK +H +   CF N   S F  N+L+ MY+  L  LD        
Sbjct: 186 VIACSNLRKHEGLRLGKQIHGY---CFRNGHWSTFTNNALMTMYAN-LGRLDD------- 234

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                +K+     +F     RN+++WNT++S + + ER+VEA+   R M+  G++P  ++
Sbjct: 235 -----AKF-----LFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVT 284

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             +V PA S L    +   ++   ++ G + + + FV S+ + MY   G     R++FD 
Sbjct: 285 LASVLPACSYLEMLGTGKEIHAYALRSG-DLIENSFVGSALVDMYCNCGQVGSGRRVFDG 343

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            LER T +WN MI GY QN H  +A+ LF++++ +  +  +  T  S + A ++ +    
Sbjct: 344 ILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFS 403

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
            + +H Y+IK  +     V NA+++                    RD+VSWNTMI+ +V 
Sbjct: 404 KESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVI 463

Query: 389 NGLDDEGLMLVYEMQ------------KQG-FMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           +G  ++ L++++EMQ            KQ  F  +S+T+  +L   ++L     GK+ HA
Sbjct: 464 SGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHA 523

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           Y +R+ +  E  + S L+DMYAK G +  +R++F++     ++  TWN ++  Y  +G  
Sbjct: 524 YAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPI--KNVITWNVIVMAYGMHGNG 581

Query: 495 EEAFVAFRQMLEHN-----VTPNVVTIASVLPACNPMGNIELGKQL 535
           EEA   F+ M+        V P  VT+ ++L AC+  G ++ G +L
Sbjct: 582 EEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKL 627



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 241/487 (49%), Gaps = 40/487 (8%)

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           + R+  +W   + +  ++  + EA+  +  M+  G+ P + +F  V  A++ L D     
Sbjct: 38  QSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGK 97

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            ++  +VK G E  + + +A+S +  Y +    D   K+FD   ER+   WN++I  + +
Sbjct: 98  QIHAHVVKYGYE-SSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCR 156

Query: 307 NNHPVEAIELFVQVL--ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN----- 359
                 A+E F  +L  +L+   F  V+ + A S + + + L LG+Q+H Y  +N     
Sbjct: 157 AQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWST 216

Query: 360 FVALPVIVLNAVI--------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           F    ++ + A +              +R+++SWNTMIS+F QN    E LM +  M  +
Sbjct: 217 FTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLE 276

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKT 463
           G   D VT+ ++L A S L     GK+ HAY LR G   E   + S L+DMY   G + +
Sbjct: 277 GVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGS 336

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPA 522
            R++F+     +R    WNAMIAGY QN   E+A + F +M+    + PN  T+AS++PA
Sbjct: 337 GRRVFD--GILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPA 394

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
                +    + +HG+ I+  L+++ +V  +L+DMYS+   +  +  +F  +  ++ V++
Sbjct: 395 SARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSW 454

Query: 583 TTMILGYGQHGMSERALSLFRSM-------------KGCGIEPDAITFVAVLSACSYAGL 629
            TMI GY   G    AL +   M             K    +P++IT + VL  C+    
Sbjct: 455 NTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAA 514

Query: 630 VDEGLQI 636
           + +G +I
Sbjct: 515 LAKGKEI 521



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 218/483 (45%), Gaps = 69/483 (14%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           QIH          T T  + ++     GR   A+ LF        + WNT+I  F  N  
Sbjct: 203 QIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNER 262

Query: 86  PYEAI--LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS-NPSR 142
             EA+  L Y  ++   P    D  T +SVL AC+    L  GK +H + +R      + 
Sbjct: 263 FVEALMSLRYMVLEGVKP----DGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENS 318

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV ++L++MY  C              +V   +     +VFD +  R    WN +++ Y 
Sbjct: 319 FVGSALVDMYCNC-------------GQVGSGR-----RVFDGILERKTGLWNAMIAGYA 360

Query: 203 KTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
           + E   +A+  F  M+   G+ P+T +  ++ PA +    + S + ++G ++K   E   
Sbjct: 361 QNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLE--R 418

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D +V ++ + MY+ +   + ++ IFD+   R+   WNTMI GYV +    +A+ +  ++ 
Sbjct: 419 DRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQ 478

Query: 322 ELDEIVF------------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             +E +             + +T ++ L   + L  L  G+++HAY ++N +A  V V +
Sbjct: 479 HANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGS 538

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           A+++                    ++V++WN ++ A+  +G  +E L L  +M  +G  +
Sbjct: 539 ALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNV 598

Query: 410 D-----SVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LIDMYAKSGLI 461
                  VT+ A+L+A S+    D G K  H     HGI   G + Y  + D+  ++G +
Sbjct: 599 GEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIE-PGPDHYACVADLLGRAGKV 657

Query: 462 KTA 464
           + A
Sbjct: 658 EQA 660



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 163/341 (47%), Gaps = 24/341 (7%)

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           R   SW   +    ++ L  E +    +M   G   DS     +L A + L++ ++GKQ 
Sbjct: 40  RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99

Query: 434 HAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           HA+++++G       + + L++ Y K   +    ++F++ +  +RD  +WN++I+ + + 
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRIN--ERDLVSWNSLISAFCRA 157

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE---LGKQLHGFSIRYLLDQNV 548
              E A  AFR ML  ++ P+  T+ S + AC+ +   E   LGKQ+HG+  R     + 
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRN-GHWST 216

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           F   +L+ MY+  G ++ A  +F    ++N +++ TMI  + Q+     AL   R M   
Sbjct: 217 FTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLE 276

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIF-------DLMQQEYKIQPSTEHYCCVADMLG 661
           G++PD +T  +VL ACSY  ++  G +I        DL++  +      + YC      G
Sbjct: 277 GVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNC----G 332

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           +VG     ++ + E         +W +++     + H E A
Sbjct: 333 QVGSGRRVFDGILE-----RKTGLWNAMIAGYAQNEHDEKA 368



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           S  R QA+W   +   T++ L  EA   +  M+   V+P+      VL A   + ++ LG
Sbjct: 37  SQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLG 96

Query: 533 KQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           KQ+H   ++Y  +  +V +  SL++ Y K   ++    VF +I E++ V++ ++I  + +
Sbjct: 97  KQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCR 156

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
               E AL  FR M    +EP + T V+ + ACS      EGL+   L +Q +       
Sbjct: 157 AQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNL-RKHEGLR---LGKQIHGYCFRNG 212

Query: 652 HYCCVAD-----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           H+    +     M   +G++ +A +F+ +L E+ N++  W +++ S
Sbjct: 213 HWSTFTNNALMTMYANLGRLDDA-KFLFKLFEDRNLIS-WNTMISS 256


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 212/617 (34%), Positives = 323/617 (52%), Gaps = 77/617 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M  R+VV+WN ++S Y +     EA   F  M                P  +S+  
Sbjct: 52  LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----------------PCKNSIS- 94

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                              N +  A      Y + G  + AR++F++  +     WN M+
Sbjct: 95  ------------------WNGMLAA------YVQNGRIEDARRLFESKADWELISWNCMM 130

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
           GGYV+ N  V+A  +F ++ E DE+ ++     + +S  +Q  EL   Q+L       F 
Sbjct: 131 GGYVKRNRLVDARGIFDRMPERDEVSWN-----TMISGYAQNGELLEAQRL-------FE 178

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
             PV        RDV +W  M+S +VQNG+ DE   +   M ++    +SV+  A+++  
Sbjct: 179 ESPV--------RDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGY 226

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
              +  D  ++     L   +  + + S+  +I  YA++G I  AR  F++     RD  
Sbjct: 227 VQCKRMDQARE-----LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ--RDSI 279

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +W A+IAGY Q+G  EEA   F +M       N  T  S L  C  +  +ELGKQ+HG  
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           ++  L+   +VG +L+ MY K G I+ A  VF  I EK  V++ TMI GY +HG  + AL
Sbjct: 340 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 399

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            LF SMK  GI PD +T V VLSACS+ GLVD+G + F  M Q+Y I  +++HY C+ D+
Sbjct: 400 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 459

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           LGR G++ +A   +K +  E +    WG+LLG+ R+HG++EL E  AK + EM+  NS  
Sbjct: 460 LGRAGRLDDAQNLMKNMPFEPDA-ATWGALLGASRIHGNTELGEKAAKMIFEMEPDNS-- 516

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G +VLLSN+YA  G W +V ++R  MR+RG++K  G SW++V   ++ F   D  HP+  
Sbjct: 517 GMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPERD 576

Query: 780 KIYEMLERLAMEMRNAG 796
           +IY  LE L ++M+  G
Sbjct: 577 RIYTFLEELDLKMKKEG 593



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 261/608 (42%), Gaps = 118/608 (19%)

Query: 31  SPPIPKLKTPTI----RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLP 86
           SPP+    +P      R  L    +      AR LFD +     V WN ++ G+  N   
Sbjct: 18  SPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYV 77

Query: 87  YEAILLYSQMKKSSPYTSCDN-YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF-- 143
            EA  ++ +M        C N  +++ +L A  +  N RI  A      R F + + +  
Sbjct: 78  KEAKEIFDEM-------PCKNSISWNGMLAAYVQ--NGRIEDAR-----RLFESKADWEL 123

Query: 144 -VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
             +N ++  Y      +DA                    +FD M  R+ V+WNT++S Y 
Sbjct: 124 ISWNCMMGGYVKRNRLVDAR------------------GIFDRMPERDEVSWNTMISGYA 165

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +    +EA R F                                             V D
Sbjct: 166 QNGELLEAQRLFE-----------------------------------------ESPVRD 184

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +F  ++ +  Y + G  D AR++FD   E+N+  WN +I GYVQ     +A ELF     
Sbjct: 185 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF----- 239

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTM 382
            + +   +V+  + +      Q  D+ Q       +NF        + + +RD +SW  +
Sbjct: 240 -EAMPCQNVSSWNTM-ITGYAQNGDIAQA------RNF-------FDRMPQRDSISWAAI 284

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+ + Q+G  +E L L  EM++ G  ++  T T+ LS  + +   ++GKQ H  +++ G+
Sbjct: 285 IAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGL 344

Query: 443 H---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
               + G  + L+ MY K G I  A  +FE  +  +++  +WN MIAGY ++G  +EA +
Sbjct: 345 ESGCYVG--NALLVMYCKCGNIDDAYIVFEGIE--EKEVVSWNTMIAGYARHGFGKEALM 400

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMY 558
            F  M +  + P+ VT+  VL AC+  G ++ G +  +  +  Y +  N    T +ID+ 
Sbjct: 401 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLL 460

Query: 559 SKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDA 614
            ++G ++ A N+   +P E ++ T+  ++     HG   + E+A  +   M     EPD 
Sbjct: 461 GRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM-----EPDN 515

Query: 615 ITFVAVLS 622
                +LS
Sbjct: 516 SGMYVLLS 523



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 55/370 (14%)

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNL 424
           ++ + + ERDVVSWN M+S + QNG   E   +  EM  +    +S++   +L+A   N 
Sbjct: 51  LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNG 106

Query: 425 RNQDVGK---------------QTHAYLLRH------GIHFEGME-------SYLIDMYA 456
           R +D  +                   Y+ R+      GI F+ M        + +I  YA
Sbjct: 107 RIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI-FDRMPERDEVSWNTMISGYA 165

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           ++G +  A+++FE  +S  RD  TW AM++GY QNG+L+EA   F  M E N       I
Sbjct: 166 QNGELLEAQRLFE--ESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII 223

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           A  +  C  M   +  ++L       +  QNV    ++I  Y+++G I  A N F ++P+
Sbjct: 224 AGYVQ-CKRM---DQAREL----FEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++S+++  +I GY Q G  E AL LF  MK  G   +  TF + LS C+    ++ G Q+
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335

Query: 637 FDLMQQEYKIQPSTEHYCCVAD----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
              +     ++   E  C V +    M  + G + +AY  V E  EE  V+  W +++  
Sbjct: 336 HGRV-----VKAGLESGCYVGNALLVMYCKCGNIDDAY-IVFEGIEEKEVVS-WNTMIAG 388

Query: 693 CRLHGHSELA 702
              HG  + A
Sbjct: 389 YARHGFGKEA 398



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 42/291 (14%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           ++ Q   L   +P     +  + ++   Q G    AR  FD + +  ++ W  II G+  
Sbjct: 231 RMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQ 290

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +    EA+ L+ +MK+       +  T++S L  CAE   L +GK VH   ++       
Sbjct: 291 SGYGEEALHLFVEMKRDGE--RLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGC 348

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           +V N+LL MY  C +  DA      Y+            VF+ +  + VV+WNT+++ Y 
Sbjct: 349 YVGNALLVMYCKCGNIDDA------YI------------VFEGIEEKEVVSWNTMIAGYA 390

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY--- 259
           +     EA+  F  M + GI P  ++ V V  A S  G           LV  G+EY   
Sbjct: 391 RHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTG-----------LVDKGTEYFYS 439

Query: 260 -VNDLFVASSA------IFMYAELGCFDFARKIFDNC-LERNTEVWNTMIG 302
              D  + +++      I +    G  D A+ +  N   E +   W  ++G
Sbjct: 440 MTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 20/189 (10%)

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           ++ AR +F++    +RD  +WNAM++GY QNG ++EA   F +M       N ++   +L
Sbjct: 46  LRAARLLFDQMP--ERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGML 99

Query: 521 PACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
            A    G IE  ++L      + L+  N  +G      Y K   +  A  +F ++PE++ 
Sbjct: 100 AAYVQNGRIEDARRLFESKADWELISWNCMMGG-----YVKRNRLVDARGIFDRMPERDE 154

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEP--DAITFVAVLSACSYAGLVDEGLQIF 637
           V++ TMI GY Q+G    A  LF         P  D  T+ A++S     G++DE  ++F
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSGYVQNGMLDEARRVF 208

Query: 638 DLMQQEYKI 646
           D M ++  +
Sbjct: 209 DGMPEKNSV 217


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 203/657 (30%), Positives = 348/657 (52%), Gaps = 60/657 (9%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           +N+++  Y  +    EA+  F  M+  GI P   +F     A +      +   ++GL+V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           K+G  Y  DLFV +S +  YAE G  D ARK+FD   ERN   W +MI GY + +   +A
Sbjct: 162 KMG--YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
           ++LF +++  +E+  + VT +  +SA ++L++L+ G++++A+I  + + +  ++++A+++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279

Query: 374 R-------DVVS-------------WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                   DV                N M S +V+ GL  E L +   M   G   D ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKND 472
           + + +S+ S LRN   GK  H Y+LR+G   ++ + + LIDMY K     TA +IF++  
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR-- 397

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN------------------------ 508
             ++   TWN+++AGY +NG ++ A+  F  M E N                        
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 509 --------VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
                   V  + VT+ S+  AC  +G ++L K ++ +  +  +  +V +GT+L+DM+S+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G    A ++F  +  ++   +T  I      G +ERA+ LF  M   G++PD + FV  
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           L+ACS+ GLV +G +IF  M + + + P   HY C+ D+LGR G + EA + ++++  E 
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           N + IW SLL +CR+ G+ E+A   A+K+  +    +  G +VLLSN+YA  G W ++ K
Sbjct: 638 NDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT--GSYVLLSNVYASAGRWNDMAK 694

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           VR  M+E+GLRK  G S I + G  + F S D+ HP+   I  ML+ ++    + G+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 170/624 (27%), Positives = 293/624 (46%), Gaps = 97/624 (15%)

Query: 41  TIRSRLSKICQEGRPH---LARQLFD-SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           TI   +++ C+ G       A+++F+ S +  T  ++N++I G+  + L  EAILL+ +M
Sbjct: 66  TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
             S    S D YT+   L ACA++R    G  +H   ++       FV NSL++ Y+ C 
Sbjct: 126 MNSG--ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC- 182

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FR 215
                        E+D ++     KVFD M  RNVV+W +++  Y + +   +AV   FR
Sbjct: 183 ------------GELDSAR-----KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
           M+    + P++++ V V  A + L D ++ + VY  +   G E VNDL V S+ + MY +
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-VNDLMV-SALVDMYMK 283

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
               D A+++FD     N ++ N M   YV+     EA+ +F  +++   +  D ++ LS
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLS 342

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------- 372
           A+S+ SQL+ +  G+  H Y+++N       + NA+I                       
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402

Query: 373 ----------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                                       E+++VSWNT+IS  VQ  L +E + +   MQ 
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462

Query: 405 Q-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
           Q G   D VT+ ++ SA  +L   D+ K  + Y+ ++GI  +  + + L+DM+++ G  +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           +A  IF  N   +RD + W A I      G  E A   F  M+E  + P+ V     L A
Sbjct: 523 SAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580

Query: 523 CNPMGNIELGKQ-------LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           C+  G ++ GK+       LHG S      ++V  G  ++D+  ++G++  A  +   +P
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVS-----PEDVHYGC-MVDLLGRAGLLEEAVQLIEDMP 634

Query: 576 -EKNSVTYTTMILGYGQHGMSERA 598
            E N V + +++      G  E A
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMA 658



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 241/570 (42%), Gaps = 77/570 (13%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH L   +   K   +++ L     E G    AR++FD ++    V W ++I G+   +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+ L+ +M +    T  ++ T   V+ ACA+  +L  G+ V+          +  +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTP-NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            ++L++MY  C                  +  D+  ++FD     N+   N + S YV+ 
Sbjct: 274 VSALVDMYMKC------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               EA+  F +M+  G+RP  IS ++   + S L +       +G +++ G E  +++ 
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375

Query: 265 VASSAIFM-----------------------------YAELGCFDFARKIFDNCLERNTE 295
            A   ++M                             Y E G  D A + F+   E+N  
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WNT+I G VQ +   EAIE+F  +   + +  D VT +S  SA   L  LDL + ++ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495

Query: 356 IIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           I KN + L V                     + N++  RDV +W   I A    G  +  
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME-SYLID 453
           + L  +M +QG   D V     L+A S+      GK+    +L+ HG+  E +    ++D
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR--QMLEHNVTP 511
           +  ++GL++ A Q+ E       D   WN+++A     G +E A  A    Q+L    T 
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPND-VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674

Query: 512 NVVTIASVLPAC---NPMGNIELGKQLHGF 538
           + V +++V  +    N M  + L  +  G 
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 204/637 (32%), Positives = 338/637 (53%), Gaps = 36/637 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M  R+ V+WNT+++ ++       +    R M   G      +F ++   ++  G 
Sbjct: 55  LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGM 114

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           +     V+ +++K+G  Y  +++  S+ + MYA+    + A   F +  + NT  WN MI
Sbjct: 115 FHLGQQVHSIIIKMG--YAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMI 172

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q      A  L +  +E +    DD T+   L  +      +L  QLH  IIK+ +
Sbjct: 173 NGYAQAGDRETAFWL-LDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGL 231

Query: 362 ALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            L   + NA+I                      RD+V+WN++++A++    +D    L+ 
Sbjct: 232 ELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI 291

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAK 457
           +MQ+ GF  D  + T+++SA  N    + G+  H  +++ G  FE    + + LI MY K
Sbjct: 292 DMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRG--FEQSVPISNALISMYLK 349

Query: 458 S--GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           S  G +K A  IFE  +  DR   +WN+++ G +Q G  E+A  +F  M    +  +  +
Sbjct: 350 SDYGSMKEALCIFESLEFKDR--VSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYS 407

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            ++VL +C+ +   +LG+Q+H  +++Y L+ N FV +SLI MYSK G+I  A   F +  
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           + +S+T+  ++ GY QHG    AL LF  M+   ++ D ITFVAVL+ACS+ GLV++G +
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCK 527

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
               M+ +Y + P  EHY C  D+ GR G++ EA   ++E+  + +   +W + LG+CR 
Sbjct: 528 FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDT-TVWKTFLGACRS 586

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            G+ ELA  VA  LLEM+        +VLLSN+Y     W+   KV++ M+ERG++K  G
Sbjct: 587 CGNIELACQVAGHLLEMEPEEHCT--YVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPG 644

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
            SWI+V   V+ F ++D  HP   +IY +LE L  E+
Sbjct: 645 WSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEI 681



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 255/567 (44%), Gaps = 58/567 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNY 108
           C+E R   A  LFD +    +V WNT+I G + C NL  EA     +  +S  +   D Y
Sbjct: 46  CKELRS--ADVLFDEMPMRDSVSWNTMIAGHINCGNL--EASWDVLRCMRSCGF-ELDRY 100

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+ S+LK  A      +G+ VH   I+     + +  ++LL+MY+ C    DA +     
Sbjct: 101 TFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYL----- 155

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                         F ++ + N V+WN +++ Y +      A      M + G +    +
Sbjct: 156 -------------SFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGT 202

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +  + P L           ++G ++K G E VN +   ++ I  Y++ G  D A++IFD+
Sbjct: 203 YAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM--CNALITSYSKCGSLDDAKRIFDS 260

Query: 289 CLE-RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQE 345
               R+   WN+++  Y+  +    A +L +   ++ E  F  D  ++ S +SA      
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI---DMQEHGFEPDLYSYTSIISACFNENI 317

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMI 383
            + G+ LH  +IK      V + NA+I                       +D VSWN+++
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           +   Q G  ++ +     M+     ID  + +A+L + S+L    +G+Q H   L++G+ 
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLE 437

Query: 444 F-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             E + S LI MY+K G+I+ AR+ FE  ++      TWNA++ GY Q+G    A   F 
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDARRSFE--EASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            M    V  + +T  +VL AC+ +G +E G K L      Y +   +      +D+Y +S
Sbjct: 496 LMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILG 588
           G +  A  +  ++P K   T     LG
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLG 582



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 224/477 (46%), Gaps = 30/477 (6%)

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L VKLG+  + D++  ++ +  Y +      A  +FD    R++  WNTMI G++ N 
Sbjct: 21  HSLAVKLGT--IADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHI-NC 77

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
             +EA    ++ +       D  TF S L  ++      LGQQ+H+ IIK   A  V   
Sbjct: 78  GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG 137

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A+++                     + VSWN MI+ + Q G  +    L+  M+++G  
Sbjct: 138 SALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEK 197

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQI 467
           +D  T   LL    +    ++  Q H  +++HG+     M + LI  Y+K G +  A++I
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+ + +G RD  TWN+++A Y      + AF     M EH   P++ +  S++ AC    
Sbjct: 258 FDSS-AGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS--GVINYAANVFAKIPEKNSVTYTTM 585
               G+ LHG  I+   +Q+V +  +LI MY KS  G +  A  +F  +  K+ V++ ++
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           + G  Q G SE A+  F  M+   ++ D  +F AVL +CS       G QI  ++  +Y 
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYG 435

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ +      +  M  + G + +A    +E  +  ++   W +L+     HG   +A
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSI--TWNALMFGYAQHGQCNVA 490


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 192/557 (34%), Positives = 301/557 (54%), Gaps = 31/557 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +  + MY++L   + A+ +      R+   W  +I G VQN     A+  F   +  
Sbjct: 43  FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSN-MRR 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----------- 366
           D I  +D TF  A  A   L+   +G+Q+HA  +K       FV                
Sbjct: 102 DSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEE 161

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              + + + ER++ +WN  +S  V  G  D+ L    E + +G+  + +T  A L+A + 
Sbjct: 162 ARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAG 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
                +G+Q H ++L+ G   +  + + LID Y K   +  +  IF  +     +  +W 
Sbjct: 222 ASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIF--SGISKPNDVSWC 279

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +MI  Y QN   E+A + F +  +  + P    ++SVL AC  +  +E+GK +H  +++ 
Sbjct: 280 SMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 339

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            +  N+FVG++L+DMY K G I  A   F ++PE+N VT+  MI GY   G ++ A++LF
Sbjct: 340 CVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLF 399

Query: 603 RSMKGCG---IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
             M  CG   + P+ +TFV VLSACS AG V+ G++IF+ M+  Y I+P  EHY CV D+
Sbjct: 400 DEMT-CGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDL 458

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           LGR G V +AY+F+K++     V  +WG+LLG+ ++ G SEL +V A  L E+D  +S  
Sbjct: 459 LGRAGMVEQAYQFIKKMPIRPTV-SVWGALLGASKMFGKSELGKVAADNLFELDPLDS-- 515

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G HVLLSN++A  G WE    VRKEM++ G++K  GCSWI  G  V+ F +KD  H ++ 
Sbjct: 516 GNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNS 575

Query: 780 KIYEMLERLAMEMRNAG 796
           +I  ML +L  EM  AG
Sbjct: 576 EIQAMLAKLRGEMEAAG 592



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 241/507 (47%), Gaps = 52/507 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + +S++++   T+  R+G+A H   I+   NP   F+YN L+NMYS       A+++   
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLL--- 64

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                                R+VV W  +++  V+  R+  A+  F  M R  I+P+  
Sbjct: 65  ---------------LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDF 109

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F   F A  SL        V+ L VK G   ++D+FV  SA  MY++ G  + ARK+FD
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAGQ--ISDVFVGCSAFDMYSKAGLTEEARKMFD 167

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN  +   V      +A+  F++    +    + +TF + L+A +    L 
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIE-FRHEGWEPNLITFCAFLNACAGASYLR 226

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
           LG+QLH +++++     V V N +I+                     + VSW +MI ++V
Sbjct: 227 LGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYV 286

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH---GIHF 444
           QN  +++  ++    +K+G       V+++LSA + L   +VGK  H   ++    G  F
Sbjct: 287 QNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIF 346

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            G  S L+DMY K G I+ A + F+  +  +R+  TWNAMI GY   G  + A   F +M
Sbjct: 347 VG--SALVDMYGKCGSIEDAERAFD--EMPERNLVTWNAMIGGYAHQGQADMAVTLFDEM 402

Query: 505 L--EHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKS 561
               H V PN VT   VL AC+  G++ +G ++      RY ++        ++D+  ++
Sbjct: 403 TCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRA 462

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILG 588
           G++  A     K+P + +V+    +LG
Sbjct: 463 GMVEQAYQFIKKMPIRPTVSVWGALLG 489



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 184/389 (47%), Gaps = 32/389 (8%)

Query: 338 SAVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVIE--------------------RDV 376
           SAVS  Q   LG+  HA IIK     LP  + N ++                     R V
Sbjct: 15  SAVST-QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSV 73

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+W  +I+  VQNG     L     M++     +  T      A+ +LR+  VGKQ HA 
Sbjct: 74  VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHAL 133

Query: 437 LLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            ++ G     F G  ++  DMY+K+GL + AR++F++    +R+ ATWNA ++     G 
Sbjct: 134 AVKAGQISDVFVGCSAF--DMYSKAGLTEEARKMFDEMP--ERNIATWNAYLSNSVLEGR 189

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            ++A  AF +       PN++T  + L AC     + LG+QLHGF ++   + +V V   
Sbjct: 190 YDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANG 249

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LID Y K   +  +  +F+ I + N V++ +MI+ Y Q+   E+A  +F   +  GIEP 
Sbjct: 250 LIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPT 309

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
                +VLSAC+   +++ G  +  L  +   +         V DM G+ G + +A    
Sbjct: 310 DFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALV-DMYGKCGSIEDAERAF 368

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            E+ E    L  W +++G     G +++A
Sbjct: 369 DEMPERN--LVTWNAMIGGYAHQGQADMA 395



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 216/508 (42%), Gaps = 59/508 (11%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLP 86
           I +L  P+P      + +  SK+    RP+ A+ L       + V W  +I G V N   
Sbjct: 33  IKTLDNPLPSFIYNHLVNMYSKL---DRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRF 89

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
             A+  +S M++ S     +++T+    KA    R+  +GK VH   ++       FV  
Sbjct: 90  TSALFHFSNMRRDS--IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGC 147

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           S  +MYS    + +A                   K+FD M  RN+  WN  +S  V   R
Sbjct: 148 SAFDMYSKAGLTEEAR------------------KMFDEMPERNIATWNAYLSNSVLEGR 189

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           Y +A+  F      G  P+ I+F     A +     +    ++G +++ G E   D+ VA
Sbjct: 190 YDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFE--ADVSVA 247

Query: 267 SSAIFMYA---ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           +  I  Y    ++GC +    IF    + N   W +MI  YVQN+   +A  +F++  + 
Sbjct: 248 NGLIDFYGKCHQVGCSEI---IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARK- 303

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
           + I   D    S LSA + L  L++G+ +H   +K  V   + V +A++           
Sbjct: 304 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIED 363

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAA 421
                    ER++V+WN MI  +   G  D  + L  EM      +  + VT   +LSA 
Sbjct: 364 AERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSAC 423

Query: 422 SNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           S   + +VG +    +  R+GI   G E Y  ++D+  ++G+++ A Q F K        
Sbjct: 424 SRAGSVNVGMEIFESMRGRYGIE-PGAEHYACVVDLLGRAGMVEQAYQ-FIKKMPIRPTV 481

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + W A++      G  E   VA   + E
Sbjct: 482 SVWGALLGASKMFGKSELGKVAADNLFE 509



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 4/232 (1%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLR--HGIHFEGMESYLIDMYAKSGLIKTARQIFEK 470
           ++ +L+ +A + +   +G+  HA +++         + ++L++MY+K     +A+ +   
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
             + +R   TW A+IAG  QNG    A   F  M   ++ PN  T      A   + +  
Sbjct: 68  --TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPL 125

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           +GKQ+H  +++     +VFVG S  DMYSK+G+   A  +F ++PE+N  T+   +    
Sbjct: 126 VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
             G  + AL+ F   +  G EP+ ITF A L+AC+ A  +  G Q+   + Q
Sbjct: 186 LEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQ 237



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/466 (22%), Positives = 191/466 (40%), Gaps = 40/466 (8%)

Query: 26  QIHSLSPPIPKLKTPTIR-SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H+L+    ++    +  S      + G    AR++FD +       WN  +   V   
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              +A+  + + +      +    T+ + L ACA    LR+G+ +H   ++        V
Sbjct: 189 RYDDALTAFIEFRHEGWEPNL--ITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N L++ Y  C        VG   +            +F  + + N V+W +++  YV+ 
Sbjct: 247 ANGLIDFYGKC------HQVGCSEI------------IFSGISKPNDVSWCSMIVSYVQN 288

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           +   +A   F    + GI P+     +V  A + L   +    V+ L VK  +  V ++F
Sbjct: 289 DEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVK--ACVVGNIF 346

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LEL 323
           V S+ + MY + G  + A + FD   ERN   WN MIGGY        A+ LF ++    
Sbjct: 347 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 406

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMI 383
             +  + VTF+  LSA S+   +++G ++   +   +           IE     +  ++
Sbjct: 407 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY----------GIEPGAEHYACVV 456

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGI 442
               + G+ ++    + +M  +     +V+V  ALL A+      ++GK     L     
Sbjct: 457 DLLGRAGMVEQAYQFIKKMPIR----PTVSVWGALLGASKMFGKSELGKVAADNLFELDP 512

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIF-EKNDSGDRDQATWNAMIAG 487
              G    L +M+A +G  + A  +  E  D G +  A  + + AG
Sbjct: 513 LDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 558


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 204/641 (31%), Positives = 340/641 (53%), Gaps = 46/641 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           +FD + +R+ V+W  I+S YV +    EA+R F +M L+  +R        + P L SLG
Sbjct: 71  LFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELR--------IDPFLLSLG 122

Query: 241 --------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                   +Y     ++G  VK G   VN +FV S+ + MY ++G    + K+FD    R
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKTG--LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR 180

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  +I G V+  +  EA   +   +   ++ +D   +  AL A +    L+ G+ +
Sbjct: 181 NAVTWTAVITGLVRAGYS-EAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239

Query: 353 HAYIIK------NFVALPVIVLNAVIER--------------DVVSWNTMISAFVQNGLD 392
           H   +K      +FVA  +  +     +              DVVSW T+++A++Q G +
Sbjct: 240 HTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
           D GL     M+    + +  T +A++S  +N      G+Q HA++L  G ++   + + +
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSI 359

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +Y+K G + +  ++F       RD  TW+ +IA Y+Q G  EEAF    +M      P
Sbjct: 360 MTLYSKCGELASVSKVFCSMKF--RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKP 417

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N   +ASVL  C  M  +E GKQLH   +   L+Q   V ++LI MY+K G I  A+ +F
Sbjct: 418 NEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIF 477

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
               + + +++T MI GY +HG S+ A+ LF +++  G+ PD++TF+ VL+ACS+AG+VD
Sbjct: 478 MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVD 537

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            G   F+ M ++Y I PS EHY C+ D+L R G++ +A   ++ +  + + + +W +LL 
Sbjct: 538 LGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDV-VWSTLLR 596

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG  +  +  A ++L++D   +  G H+ L+NI+A +G W+    +R  M+ +G+ 
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDP--NCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVV 654

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           KE G S + V   V  F S D+ HPQ   IY +LE LA  M
Sbjct: 655 KEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGM 695



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 255/559 (45%), Gaps = 47/559 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + +   V W  II G+V ++   EA+ L+S+M+  S     D +  S  LK C
Sbjct: 68  ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL-RIDPFLLSLGLKTC 126

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N   G  +H   ++     S FV ++LL+MY             +K  E+  S   
Sbjct: 127 GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMY-------------MKIGEIGRS--- 170

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CKVFD M  RN V W  +++  V+       +  F  M R  +   + ++     A +
Sbjct: 171 --CKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASA 228

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
             G       ++   +K G  +  + FVA+S   MY + G  D+    F      +   W
Sbjct: 229 DSGALNHGRSIHTQTLKKG--FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            T++  Y+Q       ++ F + +    ++ ++ TF + +S  +    L  G+QLHA+++
Sbjct: 287 TTIVTAYIQMGKEDCGLQAF-KRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
                  + V N+++                     RD+++W+T+I+A+ Q G  +E   
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
            +  M+ +G   +   + ++LS   ++   + GKQ HA++L  G+    M  S LI MYA
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I  A +IF   DS   D  +W AMI+GY ++G  +EA   F  + +  + P+ VT 
Sbjct: 466 KCGSIAEASKIFM--DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523

Query: 517 ASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             VL AC+  G ++LG    +  S  Y +  +      +ID+  ++G ++ A  +   +P
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583

Query: 576 -EKNSVTYTTMILGYGQHG 593
            + + V ++T++     HG
Sbjct: 584 IQWDDVVWSTLLRACRIHG 602



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 191/460 (41%), Gaps = 34/460 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD   +R+   W  +I GYV ++   EA+ LF ++    E+  D       L    
Sbjct: 68  ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
                  G  LH + +K  +   V V +A+++                    R+ V+W  
Sbjct: 128 LGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+  V+ G  + GL     M +     DS      L A+++    + G+  H   L+ G
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
                 + + L  MY K G +      F K  +   D  +W  ++  Y Q G  +    A
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT--LDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F++M   NV PN  T ++V+  C     ++ G+QLH   +       + V  S++ +YSK
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +   + VF  +  ++ +T++T+I  Y Q G  E A      M+  G +P+     +V
Sbjct: 366 CGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASV 425

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGE 678
           LS C    ++++G Q   L      +        C A   M  + G + EA +   +  +
Sbjct: 426 LSVCGSMAILEQGKQ---LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWK 482

Query: 679 EGNVLEIWGSLLGSCRLHGHS----ELAEVVAKKLLEMDT 714
           +  +   W +++     HGHS    EL E + K  L  D+
Sbjct: 483 DDII--SWTAMISGYAEHGHSQEAIELFENIQKVGLRPDS 520



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 239/555 (43%), Gaps = 85/555 (15%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           KI + GR   + ++FD +     V W  +I G V        +  +S M +S      D+
Sbjct: 163 KIGEIGR---SCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSK--VEYDS 217

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y Y+  LKA A++  L  G+++H   ++   + + FV NSL  MY+ C            
Sbjct: 218 YAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC------------ 265

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                  K D     F  MR  +VV+W TIV+ Y++  +    ++ F+ M    + P+  
Sbjct: 266 ------GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEY 319

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V    ++    K  + ++  ++ +G  +VN L VA+S + +Y++ G      K+F 
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVG--FVNALSVANSIMTLYSKCGELASVSKVFC 377

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           +   R+   W+T+I  Y Q  +  EA E ++  +  +    ++    S LS    +  L+
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFE-YLSRMRSEGPKPNEFALASVLSVCGSMAILE 436

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+QLHA+++   +    +V +A+I                    + D++SW  MIS + 
Sbjct: 437 QGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA 496

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           ++G   E + L   +QK G   DSVT   +L+A S+    D+G                 
Sbjct: 497 EHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG----------------- 539

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             Y  +  +K   I  +++              +  MI    + G L +A    R M   
Sbjct: 540 -FYYFNSMSKDYHITPSKE-------------HYGCMIDLLCRAGRLHDAETLIRSM--- 582

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT--SLIDMYSKSGVIN 565
            +  + V  +++L AC   G+++ G++     ++  LD N   GT  +L ++++  G   
Sbjct: 583 PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK--LDPNC-AGTHITLANIFAAKGKWK 639

Query: 566 YAANVFAKIPEKNSV 580
            AAN+   +  K  V
Sbjct: 640 EAANIRMLMKSKGVV 654


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 195/558 (34%), Positives = 301/558 (53%), Gaps = 60/558 (10%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           F +A  +F    E N  +WNTM+ GY  ++ PV A++L+V ++ L  ++ +  TF   L 
Sbjct: 16  FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLG-LLPNSYTFPFLLK 74

Query: 339 AVSQLQELDLGQQLHAYII------------------------------------KNFVA 362
           + ++ +  + GQQ+H +++                                    ++ V+
Sbjct: 75  SCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVS 134

Query: 363 LPVIV---------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
              ++                + +  +DVVSWN MIS + + G   E L L  EM K   
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             D  T+  +LSA +  R+ ++G+Q H+++  HG      + + LID+Y+K G ++TA  
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +FE      +D  +WN +I GYT   L +EA + F++ML    +PN VTI S+LPAC  +
Sbjct: 255 LFEGLSC--KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312

Query: 527 GNIELGKQLHGFSIRYLLD--QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
           G I++G+ +H +  + L D      + TSLIDMY+K G I  A  VF  +  K+  ++  
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 372

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI G+  HG +     LF  M+  GIEPD ITFV +LSACS++G +D G  IF  M Q+Y
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDY 432

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P  EHY C+ D+LG  G   EA E +K +  E + + IW SLL +CR HG+ ELAE 
Sbjct: 433 DITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGV-IWCSLLKACRRHGNLELAES 491

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+ L++++  N  PG +VLLSNIYA  G W+ V KVR  +  +G++K  GCS I++   
Sbjct: 492 FARNLMKVEPEN--PGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSE 549

Query: 765 VNRFASKDQEHPQSHKIY 782
           V+ F   D+ HP++ +IY
Sbjct: 550 VHEFIVGDKLHPRNREIY 567



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 258/517 (49%), Gaps = 64/517 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF T++  N + WNT++  Y  +   V A++ + +M+ +G+ P++ +F  +  + +    
Sbjct: 22  VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT------- 294
           ++    ++G ++KLG  Y  DL+V +S I MYA+ G  + A K+FD    R+        
Sbjct: 82  FEEGQQIHGHVLKLG--YEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALI 139

Query: 295 -----------------EV-------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
                            E+       WN MI GY +     EA+ELF ++++ + +  D+
Sbjct: 140 TGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN-VRPDE 198

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------- 373
            T ++ LSA +Q + ++LG+Q+H++I  +     + ++NA+I+                 
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              +DVVSWNT+I  +    L  E L+L  EM + G   + VT+ ++L A ++L   D+G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 431 KQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +  H Y+   L+   +   + + LIDMYAK G I+ A Q+F  N    +  ++WNAMI G
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVF--NSMLHKSLSSWNAMIFG 376

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQ 546
           +  +G     F  F +M ++ + P+ +T   +L AC+  G ++LG+ +    +  Y +  
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITP 436

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            +     +ID+   SG+   A  +   +P E + V + +++    +HG  E A S  R++
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNL 496

Query: 606 KGCGIEPD-AITFVAVLSACSYAGLVDEGLQIFDLMQ 641
               +EP+   ++V + +  + AG  DE  ++  L+ 
Sbjct: 497 M--KVEPENPGSYVLLSNIYATAGEWDEVAKVRALLN 531



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 237/492 (48%), Gaps = 44/492 (8%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F +I  P  +IWNT++ G+  ++ P  A+ LY  M         ++YT+ 
Sbjct: 14  DGFPY-AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLP--NSYTFP 70

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++    G+ +H H ++    P  +V+ SL++MY+      DA  V  +    
Sbjct: 71  FLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR 130

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              ++FD +  ++VV+WN ++S Y +T  Y EA+  F+ M+
Sbjct: 131 DVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMM 190

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   + V V  A +     +    V+  +   G  + ++L + ++ I +Y++ G 
Sbjct: 191 KTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG--FGSNLKIVNALIDLYSKCGQ 248

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT +S L 
Sbjct: 249 VETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTIVSILP 307

Query: 339 AVSQLQELDLGQQLHAYI---IKNFVALPVI-------------------VLNAVIERDV 376
           A + L  +D+G+ +H YI   +K+    P +                   V N+++ + +
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SWN MI  F  +G  + G  L   M+K G   D +T   LLSA S+    D+G+     
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           + +       +E Y  +ID+   SGL K A+++  K    + D   W +++    ++G L
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMI-KTMPMEPDGVIWCSLLKACRRHGNL 486

Query: 495 EEAFVAFRQMLE 506
           E A    R +++
Sbjct: 487 ELAESFARNLMK 498



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 34/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++FD I     V WN +I G+       EA+ L+ +M K++     D  T  +VL AC
Sbjct: 151 AQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN--VRPDEGTMVTVLSAC 208

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++R++ +G+ VH          +  + N+L+++YS C                   + +
Sbjct: 209 AQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC------------------GQVE 250

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C +F+ +  ++VV+WNT++  Y     Y EA+  F+ MLR G  P+ ++ V++ PA +
Sbjct: 251 TACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACA 310

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K   +  N   + +S I MYA+ G  + A ++F++ L ++   W
Sbjct: 311 HLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 370

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  +       +LF + +  + I  DD+TF+  LSA S   +LDLG+ +   + 
Sbjct: 371 NAMIFGFAMHGRANAGFDLFSR-MRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMT 429

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           +++   P           +  +  MI     +GL  E   ++  M  +    D V   +L
Sbjct: 430 QDYDITP----------KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEP---DGVIWCSL 476

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L A     N ++ +     L++      G    L ++YA +G
Sbjct: 477 LKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAG 518


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 204/641 (31%), Positives = 340/641 (53%), Gaps = 46/641 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           +FD + +R+ V+W  I+S YV +    EA+R F +M L+  +R        + P L SLG
Sbjct: 71  LFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELR--------IDPFLLSLG 122

Query: 241 --------DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                   +Y     ++G  VK G   VN +FV S+ + MY ++G    + K+FD    R
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXG--LVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR 180

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W  +I G V+  +  EA   +   +   ++ +D   +  AL A +    L+ G+ +
Sbjct: 181 NAVTWTAVITGLVRAGYS-EAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSI 239

Query: 353 HAYIIK------NFVALPVIVLNAVIER--------------DVVSWNTMISAFVQNGLD 392
           H   +K      +FVA  +  +     +              DVVSW T+++A++Q G +
Sbjct: 240 HTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
           D GL     M+    + +  T +A++S  +N      G+Q HA++L  G ++   + + +
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSI 359

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + +Y+K G + +  ++F       RD  TW+ +IA Y+Q G  EEAF    +M      P
Sbjct: 360 MTLYSKCGELASVSKVFCSMKF--RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKP 417

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N   +ASVL  C  M  +E GKQLH   +   L+Q   V ++LI MY+K G I  A+ +F
Sbjct: 418 NEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIF 477

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
               + + +++T MI GY +HG S+ A+ LF +++  G+ PD++TF+ VL+ACS+AG+VD
Sbjct: 478 MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVD 537

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            G   F+ M ++Y I PS EHY C+ D+L R G++ +A   ++ +  + + + +W +LL 
Sbjct: 538 LGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDV-VWSTLLR 596

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR+HG  +  +  A ++L++D   +  G H+ L+NI+A +G W+    +R  M+ +G+ 
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDP--NCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVV 654

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           KE G S + V   V  F S D+ HPQ   IY +LE LA  M
Sbjct: 655 KEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGM 695



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 255/559 (45%), Gaps = 47/559 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + +   V W  II G+V ++   EA+ L+S+M+  S     D +  S  LK C
Sbjct: 68  ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL-RIDPFLLSLGLKTC 126

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N   G  +H   ++     S FV ++LL+MY             +K  E+  S   
Sbjct: 127 GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMY-------------MKIGEIGRS--- 170

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CKVFD M  RN V W  +++  V+       +  F  M R  +   + ++     A +
Sbjct: 171 --CKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASA 228

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
             G       ++   +K G  +  + FVA+S   MY + G  D+    F      +   W
Sbjct: 229 DSGALNHGRSIHTQTLKKG--FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSW 286

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            T++  Y+Q       ++ F + +    ++ ++ TF + +S  +    L  G+QLHA+++
Sbjct: 287 TTIVTAYIQMGKEDCGLQAF-KRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
                  + V N+++                     RD+++W+T+I+A+ Q G  +E   
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYA 456
            +  M+ +G   +   + ++LS   ++   + GKQ HA++L  G+    M  S LI MYA
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYA 465

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G I  A +IF   DS   D  +W AMI+GY ++G  +EA   F  + +  + P+ VT 
Sbjct: 466 KCGSIAEASKIFM--DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523

Query: 517 ASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             VL AC+  G ++LG    +  S  Y +  +      +ID+  ++G ++ A  +   +P
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583

Query: 576 -EKNSVTYTTMILGYGQHG 593
            + + V ++T++     HG
Sbjct: 584 IQWDDVVWSTLLRACRIHG 602



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 191/460 (41%), Gaps = 34/460 (7%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD   +R+   W  +I GYV ++   EA+ LF ++    E+  D       L    
Sbjct: 68  ARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCG 127

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
                  G  LH + +K  +   V V +A+++                    R+ V+W  
Sbjct: 128 LGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTA 187

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+  V+ G  + GL     M +     DS      L A+++    + G+  H   L+ G
Sbjct: 188 VITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
                 + + L  MY K G +      F K  +   D  +W  ++  Y Q G  +    A
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRT--LDVVSWTTIVTAYIQMGKEDCGLQA 305

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F++M   NV PN  T ++V+  C     ++ G+QLH   +       + V  S++ +YSK
Sbjct: 306 FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSK 365

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +   + VF  +  ++ +T++T+I  Y Q G  E A      M+  G +P+     +V
Sbjct: 366 CGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASV 425

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGE 678
           LS C    ++++G Q   L      +        C A   M  + G + EA +   +  +
Sbjct: 426 LSVCGSMAILEQGKQ---LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWK 482

Query: 679 EGNVLEIWGSLLGSCRLHGHS----ELAEVVAKKLLEMDT 714
           +  +   W +++     HGHS    EL E + K  L  D+
Sbjct: 483 DDII--SWTAMISGYAEHGHSQEAIELFENIQKVGLRPDS 520



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 131/555 (23%), Positives = 239/555 (43%), Gaps = 85/555 (15%)

Query: 48  KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           KI + GR   + ++FD +     V W  +I G V        +  +S M +S      D+
Sbjct: 163 KIGEIGR---SCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSK--VEYDS 217

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y Y+  LKA A++  L  G+++H   ++   + + FV NSL  MY+ C            
Sbjct: 218 YAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC------------ 265

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                  K D     F  MR  +VV+W TIV+ Y++  +    ++ F+ M    + P+  
Sbjct: 266 ------GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEY 319

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V    ++    K  + ++  ++ +G  +VN L VA+S + +Y++ G      K+F 
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVG--FVNALSVANSIMTLYSKCGELASVSKVFC 377

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           +   R+   W+T+I  Y Q  +  EA E ++  +  +    ++    S LS    +  L+
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFE-YLSRMRSEGPKPNEFALASVLSVCGSMAILE 436

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+QLHA+++   +    +V +A+I                    + D++SW  MIS + 
Sbjct: 437 QGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYA 496

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           ++G   E + L   +QK G   DSVT   +L+A S+    D+G                 
Sbjct: 497 EHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLG----------------- 539

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             Y  +  +K   I  +++              +  MI    + G L +A    R M   
Sbjct: 540 -FYYFNSMSKDYHITPSKE-------------HYGCMIDLLCRAGRLHDAETLIRSM--- 582

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT--SLIDMYSKSGVIN 565
            +  + V  +++L AC   G+++ G++     ++  LD N   GT  +L ++++  G   
Sbjct: 583 PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK--LDPNC-AGTHITLANIFAAKGKWK 639

Query: 566 YAANVFAKIPEKNSV 580
            AAN+   +  K  V
Sbjct: 640 EAANIRMLMKSKGVV 654


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 204/637 (32%), Positives = 338/637 (53%), Gaps = 36/637 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M  R+ V+WNT+++ ++       +    R M   G      +F ++   ++  G 
Sbjct: 55  LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGM 114

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           +     V+ +++K+G  Y  +++  S+ + MYA+    + A   F +  + NT  WN MI
Sbjct: 115 FHLGQQVHSIIIKMG--YAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMI 172

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q      A  L +  +E +    DD T+   L  +      +L  QLH  IIK+ +
Sbjct: 173 NGYAQAGDRETAFWL-LDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGL 231

Query: 362 ALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            L   + NA+I                      RD+V+WN++++A++    +D    L+ 
Sbjct: 232 ELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI 291

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAK 457
           +MQ+ GF  D  + T+++SA  N    + G+  H  +++ G  FE    + + LI MY K
Sbjct: 292 DMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRG--FEQSVPISNALISMYLK 349

Query: 458 S--GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           S  G +K A  IFE  +  DR   +WN+++ G +Q G  E+A  +F  M    +  +  +
Sbjct: 350 SDYGSMKEALCIFESLEFKDR--VSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYS 407

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            ++VL +C+ +   +LG+Q+H  +++Y L+ N FV +SLI MYSK G+I  A   F +  
Sbjct: 408 FSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS 467

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           + +S+T+  ++ GY QHG    AL LF  M+   ++ D ITFVAVL+ACS+ GLV++G +
Sbjct: 468 KNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCK 527

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
               M+ +Y + P  EHY C  D+ GR G++ EA   ++E+  + +   +W + LG+CR 
Sbjct: 528 FLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDT-TVWKTFLGACRS 586

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            G+ ELA  VA  LLEM+        +VLLSN+Y     W+   KV++ M+ERG++K  G
Sbjct: 587 CGNIELACQVAGHLLEMEPEEHCT--YVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPG 644

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
            SWI+V   V+ F ++D  HP   +IY +LE L  E+
Sbjct: 645 WSWIEVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEI 681



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 256/567 (45%), Gaps = 58/567 (10%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNY 108
           C+E R   A  LFD +    +V WNT+I G + C NL  EA     +  +S  +   D Y
Sbjct: 46  CKELRS--ADVLFDEMPMRDSVSWNTMIAGHINCGNL--EASWDVLRCMRSCGF-ELDRY 100

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+ S+LK  A      +G+ VH   I+     + +  ++LL+MY+ C    DA +     
Sbjct: 101 TFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYL----- 155

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                         F ++ + N V+WN +++ Y +      A      M + G +    +
Sbjct: 156 -------------SFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGT 202

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +  + P L           ++G ++K G E VN +   ++ I  Y++ G  D A++IFD+
Sbjct: 203 YAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM--CNALITSYSKCGSLDDAKRIFDS 260

Query: 289 CLE-RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQE 345
               R+   WN+++  Y+  +    A +L +   ++ E  F  D  ++ S +SA      
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLI---DMQEHGFEPDLYSYTSIISACFNENI 317

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMI 383
            + G+ LH  +IK      V + NA+I                       +D VSWN+++
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           +   Q G  ++ +     M+     ID  + +A+L + S+L    +G+Q H   L++G+ 
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLE 437

Query: 444 F-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
             E + S LI MY+K G+I+ AR+ FE  ++      TWNA++ GY Q+G    A   F 
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDARRSFE--EASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            M E  V  + +T  +VL AC+ +G +E G K L      Y +   +      +D+Y +S
Sbjct: 496 LMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRS 555

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILG 588
           G +  A  +  ++P K   T     LG
Sbjct: 556 GRLEEAKALIEEMPFKPDTTVWKTFLG 582



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 127/477 (26%), Positives = 224/477 (46%), Gaps = 30/477 (6%)

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L VKLG+  + D++  ++ +  Y +      A  +FD    R++  WNTMI G++ N 
Sbjct: 21  HSLAVKLGT--IADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHI-NC 77

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
             +EA    ++ +       D  TF S L  ++      LGQQ+H+ IIK   A  V   
Sbjct: 78  GNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAG 137

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A+++                     + VSWN MI+ + Q G  +    L+  M+++G  
Sbjct: 138 SALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEK 197

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQI 467
           +D  T   LL    +    ++  Q H  +++HG+     M + LI  Y+K G +  A++I
Sbjct: 198 VDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F+ + +G RD  TWN+++A Y      + AF     M EH   P++ +  S++ AC    
Sbjct: 258 FDSS-AGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNEN 316

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS--GVINYAANVFAKIPEKNSVTYTTM 585
               G+ LHG  I+   +Q+V +  +LI MY KS  G +  A  +F  +  K+ V++ ++
Sbjct: 317 ISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSI 376

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           + G  Q G SE A+  F  M+   ++ D  +F AVL +CS       G QI  ++  +Y 
Sbjct: 377 LTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYG 435

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ +      +  M  + G + +A    +E  +  ++   W +L+     HG   +A
Sbjct: 436 LESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSI--TWNALMFGYAQHGQCNVA 490


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 194/636 (30%), Positives = 342/636 (53%), Gaps = 36/636 (5%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M +RNVV+WN+++S Y +   Y E +  F+      +R    +F N         D +  
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
            +++ L+   G      + + +S I MY + G  D+AR +F++  E ++  WN++I GYV
Sbjct: 61  RLIHALITVSG--LGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ--LQELDLGQQLHAYIIKNFVAL 363
           +     E + L V++L    +  +     SAL A        ++ G+ LH   +K  + L
Sbjct: 119 RIGSNDEMLRLLVKMLR-HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDL 177

Query: 364 PVIVLNAVIER--------------------DVVSWNTMISAFVQ-----NGLDDEGLML 398
            V+V  A+++                     +VV +N MI+ F+Q     +   +E + L
Sbjct: 178 DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYL 237

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAK 457
            +EMQ +G      T +++L A S +   + GKQ HA + ++ +   E + + L+++Y+ 
Sbjct: 238 FFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSL 297

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           SG I+   + F  + +   D  +W ++I G+ QNG  E     F ++L     P+  TI+
Sbjct: 298 SGSIEDGLKCF--HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 355

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            +L AC  +  ++ G+Q+H ++I+  +     +  S I MY+K G I+ A   F +    
Sbjct: 356 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP 415

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + V+++ MI    QHG ++ A+ LF  MKG GI P+ ITF+ VL ACS+ GLV+EGL+ F
Sbjct: 416 DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYF 475

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
           ++M++++ I P+ +H  C+ D+LGR G++ EA  F+ + G EG+ + +W SLL +CR+H 
Sbjct: 476 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPV-MWRSLLSACRVHK 534

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
            ++  + VA++++E++   +    +VLL NIY + G      ++R  M++RG++KE G S
Sbjct: 535 ATDTGKRVAERVIELEPEAAAS--YVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLS 592

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           WI+VG  V+ F + D+ HP S  IY  LE +  E++
Sbjct: 593 WIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIK 628



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 253/531 (47%), Gaps = 66/531 (12%)

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           +   V WN++I G+      +E + L+ + + S      D +T+S+ L  C  T +LR+G
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSD--LRLDKFTFSNALSVCGRTLDLRLG 60

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           + +H             + NSL++MY  C               +D+++      VF++ 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKC-------------GRIDWARL-----VFESA 102

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS--LGDYKS 244
              + V+WN++++ YV+     E +R    MLR G+  ++ +  +   A  S      + 
Sbjct: 103 DELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 162

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
             +++G  VKLG +   D+ V ++ +  YA++G  + A KIF    + N  ++N MI G+
Sbjct: 163 GKMLHGCAVKLGLDL--DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGF 220

Query: 305 VQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           +Q     +    EA+ LF + ++   +   + TF S L A S ++  + G+Q+HA I K 
Sbjct: 221 LQMETMADEFANEAMYLFFE-MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY 279

Query: 360 FVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
            +     + NA++E                     DVVSW ++I   VQNG  + GL L 
Sbjct: 280 NLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 339

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKS 458
           +E+   G   D  T++ +LSA +NL     G+Q HAY ++ GI +F  +++  I MYAK 
Sbjct: 340 HELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKC 399

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G I +A   F+  ++ + D  +W+ MI+   Q+G  +EA   F  M    + PN +T   
Sbjct: 400 GDIDSANMTFK--ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 457

Query: 519 VLPACNPMGNIELG-------KQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           VL AC+  G +E G       K+ HG +       NV     ++D+  ++G
Sbjct: 458 VLVACSHGGLVEEGLRYFEIMKKDHGIT------PNVKHSACIVDLLGRAG 502



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 218/500 (43%), Gaps = 72/500 (14%)

Query: 27  IHSLSPPIPKLKTPTI--RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           IH+L   +  L  P +   S +   C+ GR   AR +F+S     +V WN++I G+V   
Sbjct: 63  IHAL-ITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 121

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE--TRNLRIGKAVHCHFIRCFSNPSR 142
              E + L  +M +     + ++Y   S LKAC    + ++  GK +H   ++   +   
Sbjct: 122 SNDEMLRLLVKMLRHG--LNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            V  +LL+ Y+      DA                   K+F  M   NVV +N +++ ++
Sbjct: 180 VVGTALLDTYAKIGDLEDAT------------------KIFKLMPDPNVVMYNAMIAGFL 221

Query: 203 KTERYV-----EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           + E        EA+  F  M   G++PS  +F ++  A S++  ++    ++  + K   
Sbjct: 222 QMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNL 281

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           +  +D F+ ++ + +Y+  G  +   K F +  + +   W ++I G+VQN      + LF
Sbjct: 282 Q--SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLF 339

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
            ++L       D+ T    LSA + L  +  G+Q+HAY IK  +    I+ N+ I     
Sbjct: 340 HELL-FSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAK 398

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                            D+VSW+ MIS+  Q+G   E + L   M+  G   + +T   +
Sbjct: 399 CGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGV 458

Query: 418 LSAASN-------LRNQDVGKQTHAYL--LRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
           L A S+       LR  ++ K+ H     ++H        + ++D+  ++G +  A    
Sbjct: 459 LVACSHGGLVEEGLRYFEIMKKDHGITPNVKH-------SACIVDLLGRAGRLAEAESFI 511

Query: 469 EKNDSG-DRDQATWNAMIAG 487
              DSG + D   W ++++ 
Sbjct: 512 M--DSGFEGDPVMWRSLLSA 529



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 183/428 (42%), Gaps = 51/428 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV-----CNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           A ++F  +  P  V++N +I GF+      +    EA+ L+ +M+      S   +T+SS
Sbjct: 198 ATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPS--EFTFSS 255

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LKAC+       GK +H    +       F+ N+L+ +YS   S  D    GL      
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIED----GL------ 305

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   K F +  + +VV+W +++  +V+  ++   +  F  +L  G +P   +   +
Sbjct: 306 --------KCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 357

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A ++L   KS + ++   +K G    N   + +S I MYA+ G  D A   F      
Sbjct: 358 LSACANLAAVKSGEQIHAYAIKTG--IGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP 415

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W+ MI    Q+    EA++LF ++++   I  + +TFL  L A S    ++ G + 
Sbjct: 416 DIVSWSVMISSNAQHGCAKEAVDLF-ELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 474

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE--MQKQGFMID 410
              + K+    P               N   SA + + L   G +   E  +   GF  D
Sbjct: 475 FEIMKKDHGITP---------------NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGD 519

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIF 468
            V   +LLSA    +  D GK+    ++   +  E   SY  L ++Y  +G+   A +I 
Sbjct: 520 PVMWRSLLSACRVHKATDTGKRVAERVIE--LEPEAAASYVLLYNIYNDAGIQMPATEI- 576

Query: 469 EKNDSGDR 476
            +N   DR
Sbjct: 577 -RNLMKDR 583


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 216/648 (33%), Positives = 339/648 (52%), Gaps = 62/648 (9%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           ++  WN  +S Y++T R  EA+R F+ M R     S++S+  +       G+++ A  ++
Sbjct: 63  DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             + +       DL   +  I  Y        AR++F+   ER+   WNTM+ GY QN  
Sbjct: 119 DEMPE------RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-------------LDLGQQLHAYI 356
             +A  +F ++ E +++ ++    LSA    S+++E             +     L  ++
Sbjct: 173 VDDARSVFDRMPEKNDVSWN--ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
            K  +       +++  RDVVSWNT+I+ + Q+G  DE   L  E   Q    D  T TA
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTA 286

Query: 417 LLSAASNLRNQDVGKQ-----------THAYLLRHGIHFEGME----------------- 448
           ++S     R  +  ++           +   +L   +  E ME                 
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + +I  YA+ G I  A+ +F+K     RD  +W AMIAGY+Q+G   EA   F QM    
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPK--RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
              N  + +S L  C  +  +ELGKQLHG  ++   +   FVG +L+ MY K G I  A 
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           ++F ++  K+ V++ TMI GY +HG  E AL  F SMK  G++PD  T VAVLSACS+ G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LVD+G Q F  M Q+Y + P+++HY C+ D+LGR G + +A+  +K +  E +   IWG+
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA-AIWGT 583

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LLG+ R+HG++ELAE  A K+  M+  NS  G +VLLSN+YA  G W +V K+R  MR++
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENS--GMYVLLSNLYASSGRWGDVGKLRVRMRDK 641

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           G++K  G SWI++    + F+  D+ HP+  +I+  LE L + M+ AG
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 232/527 (44%), Gaps = 76/527 (14%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  + +    +S   + G   LAR+LFD +     V WN +I G+V N    +A  L+
Sbjct: 90  MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY- 152
             M +       D  +++++L   A+   +   ++V   F R     +   +N+LL+ Y 
Sbjct: 150 EIMPER------DVCSWNTMLSGYAQNGCVDDARSV---FDR-MPEKNDVSWNALLSAYV 199

Query: 153 ------STCL---SSLDAEMVGLKYVEVDYSKYDLVCKV---FDTMRRRNVVAWNTIVSW 200
                   C+   S  +  +V    +   + K   + +    FD+M  R+VV+WNTI++ 
Sbjct: 200 QNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITG 259

Query: 201 YVKTERYVEAVRQF-----------RMMLRMGIRPSTISFVN-VFPALSSLGDYKSADVV 248
           Y ++ +  EA + F             M+   I+   +     +F  +    +     ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML 319

Query: 249 YGLLVKLGSEYVNDLF---------VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            G +     E   +LF           ++ I  YA+ G    A+ +FD   +R+   W  
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI GY Q+ H  EA+ LFVQ +E +    +  +F SALS  + +  L+LG+QLH  ++K 
Sbjct: 380 MIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
                  V NA++                     +D+VSWNTMI+ + ++G  +  L   
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ-----THAY-LLRHGIHFEGMESYLID 453
             M+++G   D  T+ A+LSA S+    D G+Q     T  Y ++ +  H+  M    +D
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM----VD 554

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +  ++GL++ A  +  KN   + D A W  ++     +G  E A  A
Sbjct: 555 LLGRAGLLEDAHNLM-KNMPFEPDAAIWGTLLGASRVHGNTELAETA 600



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 222/483 (45%), Gaps = 76/483 (15%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           L+K G   + +  VA S+   Y   G  + A ++F      ++  +N MI GY++N    
Sbjct: 56  LLKCGDSDIKEWNVAISS---YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE 112

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
            A +LF ++ E D + ++       +     ++  +LG+    + I     +P       
Sbjct: 113 LARKLFDEMPERDLVSWN-------VMIKGYVRNRNLGKARELFEI-----MP------- 153

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDV- 429
            ERDV SWNTM+S + QNG  D+   +   M ++    + V+  ALLSA   N + ++  
Sbjct: 154 -ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC 208

Query: 430 -------------------GKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKT 463
                              G      ++     F+ M        + +I  YA+SG I  
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE 268

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           ARQ+F+  +S  +D  TW AM++GY QN ++EEA   F +M E     N V+  ++L   
Sbjct: 269 ARQLFD--ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGY 322

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
                +E+ K+L  F +  +  +NV    ++I  Y++ G I+ A N+F K+P+++ V++ 
Sbjct: 323 VQGERMEMAKEL--FDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI GY Q G S  AL LF  M+  G   +  +F + LS C+    ++ G Q+   +   
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL--- 435

Query: 644 YKIQPSTEHYCCVAD----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
             ++   E  C V +    M  + G + EA +  KE+   G  +  W +++     HG  
Sbjct: 436 --VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA--GKDIVSWNTMIAGYSRHGFG 491

Query: 700 ELA 702
           E+A
Sbjct: 492 EVA 494


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 333/619 (53%), Gaps = 27/619 (4%)

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N ++  +        A+  +R ML  G RP   +F  V    + LG  +     +   ++
Sbjct: 76  NVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIR 135

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           LG    ++++  +S +  YA+LG    A ++FD    R+   WN+M+ GYV N     A+
Sbjct: 136 LGL-VGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALAL 194

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
           + F ++ E  ++  D V  ++AL+A      L  G+++HAY+I++ +   V V  ++++ 
Sbjct: 195 DCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDM 254

Query: 374 -------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                              R VV+WN MI  +  NG  +E      +M+ +G  ++ VT 
Sbjct: 255 YCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTA 314

Query: 415 TALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
             LL+A +   +   G+  H Y+ R   +    +E+ L++MY+K G +K++  IF +   
Sbjct: 315 INLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMT- 373

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            ++   +WN MIA Y    +  EA   F ++L   + P+  T+++V+PA   +G +   +
Sbjct: 374 -NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCR 432

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           Q+H + +R    +N  V  +++ MY++ G +  +  +F K+  K+ +++ T+I+GY  HG
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHG 492

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
             + AL +F  MK  G++P+  TFV+VL+ACS +G+ DEG   F+LMQ++Y I P  EHY
Sbjct: 493 QGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHY 552

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ D+LGR G + E  +F++ +        IWGSLL + R     ++AE  A+++ E++
Sbjct: 553 GCMTDLLGRAGDLREVLKFIESI-PITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELE 611

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
             N+  G +V+LS++YA+ G WE+V ++R  M E+GLR+    S +++ G    F + D 
Sbjct: 612 HDNT--GCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDM 669

Query: 774 EHPQSHKIYEMLERLAMEM 792
            HPQS  I+E+ + L+ ++
Sbjct: 670 THPQSKTIHEVSDVLSRKI 688



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 239/544 (43%), Gaps = 68/544 (12%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
           T+  PPP++          PK + P+++S +      GR H A     S   P   + N 
Sbjct: 30  TSKEPPPRVR---------PK-RGPSLKSLVLSHAAAGRMHDALAAVRS--SPDAFLHNV 77

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
           +I GF    LP  A+  Y  M  +      D +T+  V+K CA    L  G+A H   IR
Sbjct: 78  VIRGFADAGLPEAALAAYRAMLAAGARP--DRFTFPVVVKCCARLGALEEGRAAHSAAIR 135

Query: 136 C-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
                   +  NSLL  Y+      DAE                  +VFD M  R++V W
Sbjct: 136 LGLVGSEVYTGNSLLAFYAKLGMVADAE------------------RVFDGMPVRDIVTW 177

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           N++V  YV       A+  FR M   + ++   +  +    A            V+  ++
Sbjct: 178 NSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVI 237

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           + G E   D+ V +S + MY + G    A  +F     R    WN MIGGY  N  P EA
Sbjct: 238 RHGLE--QDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEA 295

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
            + FVQ ++ +    + VT ++ L+A +Q +    G+ +H Y+ ++     V++  A++E
Sbjct: 296 FDCFVQ-MKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLE 354

Query: 374 --------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                               + +VSWN MI+A++   + +E + L  E+  Q    D  T
Sbjct: 355 MYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFT 414

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI-----DMYAKSGLIKTARQIF 468
           ++A++ A   L      +Q H+Y++R     +  E+ L+      MYA+ G + ++R+IF
Sbjct: 415 MSAVVPAFVLLGLLRQCRQMHSYIVR----LDYGENTLVTNAVMHMYARCGDVVSSRKIF 470

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +K     +D  +WN +I GY  +G  + A   F +M  + + PN  T  SVL AC+  G 
Sbjct: 471 DK--MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGM 528

Query: 529 IELG 532
            + G
Sbjct: 529 ADEG 532



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           SL+  ++ +G ++ A       P+  +  +  +I G+   G+ E AL+ +R+M   G  P
Sbjct: 48  SLVLSHAAAGRMHDALAAVRSSPD--AFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 613 DAITFVAVLSACSYAGLVDEG 633
           D  TF  V+  C+  G ++EG
Sbjct: 106 DRFTFPVVVKCCARLGALEEG 126


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 209/695 (30%), Positives = 365/695 (52%), Gaps = 59/695 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ +  P TV WN I+     +    EA+  + +M+     T  D  T+ ++L AC
Sbjct: 258 AREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITP-DKVTFITILNAC 316

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    L  G+ +H   ++C  +    V N ++ MYS+C                   + D
Sbjct: 317 SSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSC------------------GRID 358

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F TM  R+ ++WNTI+S + +     EAV  FR ML  GI P   +F+++    +
Sbjct: 359 NAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA 418

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   + A ++  L+V+ G E   D+F+ S+ I M++  G    AR +FD+  +R+  +W
Sbjct: 419 RM---QEAKILSELMVESGVEL--DVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMW 473

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I  YVQ+    +A+    +++ L+ ++ +D T ++AL+A + L  L  G+ +HA+ I
Sbjct: 474 TSIISSYVQHGSSDDALGC-TRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAI 532

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +   A    V NA+I                    +++VSWNT+ +A+VQ     E L L
Sbjct: 533 ERGFAASPAVGNALINMYAKCGCLEEADRVFHQCGKNLVSWNTIAAAYVQRDKWREALQL 592

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAK 457
             EMQ +G   D V+   +L+  S+      G++ H  LL  G+  + + S  L++MY  
Sbjct: 593 FQEMQLEGLKADKVSFVTVLNGCSSASE---GRKIHNILLETGMESDHIVSTALLNMYTA 649

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           S  +  A +IF + +   RD  +WNAMIAG  ++GL  EA   F++M    V P+ ++  
Sbjct: 650 SKSLDEASRIFSRMEF--RDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFV 707

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAK 573
           +VL A +      L KQ      + + DQ    +  VG +++ M+ +SG +  A   F +
Sbjct: 708 TVLNAFSGSSPSSL-KQAR-LVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFER 765

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I E+++ ++  ++  + QHG  E+AL LFR M+     PD+IT V+VLSACS+ GL++EG
Sbjct: 766 IRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEG 825

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
              F  M +E+ I  S EHY CV D+L R G++ +A E ++++    + + +W +LL +C
Sbjct: 826 YHHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYV-LWMTLLSAC 884

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           ++ G  + A+ V ++++E+D R   P  +V+LS++
Sbjct: 885 KVQGDEKRAKRVGERVMELDPRR--PAAYVVLSSV 917



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 163/604 (26%), Positives = 289/604 (47%), Gaps = 52/604 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F S+  P+ V WN+++  F  +    +A  ++ +MK      + D  T+ +VL  C
Sbjct: 56  AVSVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG--LAPDRITFVTVLDGC 113

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   +L  GK +H   +      +  V  SL+ MY  C    DA                
Sbjct: 114 SAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDAR--------------- 158

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD +  ++VV+W +++  YV+ +R VEA+  F  M   G+ P+ I++     A +
Sbjct: 159 ---RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACA 215

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +       +++  +++ G E  +D+ V+ + + MY + G  + AR++F+     NT  W
Sbjct: 216 HVESMADGKLIHSQVLEDGFE--SDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSW 273

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N ++    Q+   VEA+  F ++     I  D VTF++ L+A S    L  G+ LH  I+
Sbjct: 274 NAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECIL 333

Query: 358 KNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLDDEGLM 397
           +      +IV N +                    +ERD +SWNT+IS   Q G  DE + 
Sbjct: 334 QCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVH 393

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           L   M  +G   D  T  +++   + ++   +  +    ++  G+  +  + S LI+M++
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARMQEAKILSE---LMVESGVELDVFLVSALINMHS 450

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G ++ AR +F  +D  DRD   W ++I+ Y Q+G  ++A    R M    +  N  T+
Sbjct: 451 RYGNVREARSLF--DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTL 508

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            + L AC  +  +  GK +H  +I      +  VG +LI+MY+K G +  A  VF +   
Sbjct: 509 VTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG- 567

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN V++ T+   Y Q      AL LF+ M+  G++ D ++FV VL+ CS A    EG +I
Sbjct: 568 KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGRKI 624

Query: 637 FDLM 640
            +++
Sbjct: 625 HNIL 628



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 250/497 (50%), Gaps = 35/497 (7%)

Query: 231 NVFPALSSLGDYKSADVVYGLLVKL---GSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
             F AL  L   KSA +  G  V      SE+  D  V ++ I MY + GC + A  +F 
Sbjct: 3   GTFLALLGLCAKKSA-IAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQ 61

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           +    +   WN+++  + ++    +A ++F + ++L  +  D +TF++ L   S + +L 
Sbjct: 62  SLDHPSQVSWNSLLAAFARDGQFQQAFQIFQR-MKLQGLAPDRITFVTVLDGCSAIGDLS 120

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+ LH ++++  +   V+V  ++I+                    +DVVSW +MI  +V
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYV 180

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           Q+    E L L + M+  G + + +T    +SA +++ +   GK  H+ +L  G   + +
Sbjct: 181 QHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV 240

Query: 448 ES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-L 505
            S  +++MY K G ++ AR++FE+      +  +WNA++A  TQ+G   EA   F++M L
Sbjct: 241 VSCAIVNMYGKCGSLEDAREVFERMP--HPNTVSWNAIVAACTQHGCCVEALWYFQRMQL 298

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +  +TP+ VT  ++L AC+    +  G+ LH   ++   D ++ VG  ++ MYS  G I+
Sbjct: 299 QGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRID 358

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            AA  F+ + E++++++ T+I G+ Q G  + A+ LFR M   GI PD  TF++++   +
Sbjct: 359 NAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA 418

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
                 +  +I   +  E  ++        + +M  R G V EA     ++ +   V+  
Sbjct: 419 RM----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVM-- 472

Query: 686 WGSLLGSCRLHGHSELA 702
           W S++ S   HG S+ A
Sbjct: 473 WTSIISSYVQHGSSDDA 489



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 274/579 (47%), Gaps = 73/579 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A   F ++     + WNTII G        EA+ L+ +M       + D +T+ S
Sbjct: 355 GRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEG--ITPDKFTFIS 412

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++   A  +  +I   +    +        F+ ++L+NM+S             +Y  V 
Sbjct: 413 IIDGTARMQEAKILSEL---MVESGVELDVFLVSALINMHS-------------RYGNVR 456

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            ++      +FD M+ R++V W +I+S YV+     +A+   R+M   G+  +  + V  
Sbjct: 457 EAR-----SLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTA 511

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +SL       +++   ++ G  +     V ++ I MYA+ GC + A ++F  C  +
Sbjct: 512 LNACASLTALSEGKLIHAHAIERG--FAASPAVGNALINMYAKCGCLEEADRVFHQC-GK 568

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WNT+   YVQ +   EA++LF Q ++L+ +  D V+F++ L+  S   E   G+++
Sbjct: 569 NLVSWNTIAAAYVQRDKWREALQLF-QEMQLEGLKADKVSFVTVLNGCSSASE---GRKI 624

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  +++  +    IV  A++                     RD+VSWN MI+   ++GL 
Sbjct: 625 HNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLS 684

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES--- 449
            E + +   MQ +G   D ++   +L+A S      + KQ  A L+   I  +G E+   
Sbjct: 685 REAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSL-KQ--ARLVEKLISDQGYETDTI 741

Query: 450 ---YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
               ++ M+ +SG +  AR+ FE+    +RD A+WN ++  + Q+G +E+A   FR+M +
Sbjct: 742 VGNAIVSMFGRSGRLAEARRAFERIR--ERDAASWNVIVTAHAQHGEVEQALKLFRRMQQ 799

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS------LIDMYSK 560
            +  P+ +T+ SVL AC+  G IE G   H F+    + +   +  S      ++D+ ++
Sbjct: 800 ESSRPDSITLVSVLSACSHGGLIEEG--YHHFTS---MGREFGIAGSQEHYGCVVDLLAR 854

Query: 561 SGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERA 598
           +G ++ A  +  K+P   S V + T++      G  +RA
Sbjct: 855 AGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRA 893


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 201/640 (31%), Positives = 334/640 (52%), Gaps = 34/640 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF  +   N V+W  IV+ + +   Y EA+  +R M+  G+RP    FV      SS  D
Sbjct: 14  VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKD 73

Query: 242 YKSADVVYGLLVKLGS-EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            K   +++ ++++    E+  D+ + ++ I MYA     + ARK FD   ++    WN +
Sbjct: 74  LKQGQLLHAMILETRLLEF--DIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNAL 131

Query: 301 IGGYVQNNHPVEAIELFVQVLEL--DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           I GY +N     A++++  ++    + +  D +TF SAL A + + ++  G+++ A  + 
Sbjct: 132 IAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVA 191

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  A   IV NA+I                     RDV++WNTMIS + + G   + L L
Sbjct: 192 SGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALEL 251

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
              M       + VT   LL+A +NL + + G+  H  +   G   +  + + L++MY K
Sbjct: 252 FQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTK 311

Query: 458 -SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
            S  ++ ARQ+FE+  +  RD  TWN +I  Y Q G  ++A   F+QM   NV PN +T+
Sbjct: 312 CSSSLEEARQVFERMRT--RDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ++VL AC  +G    GK +H          +V +  SL++MY++ G ++    VFA I +
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V+++T+I  Y QHG S   L  F  +   G+  D +T V+ LSACS+ G++ EG+Q 
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQT 489

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  ++ + P   H+ C+ D+L R G++  A   + ++    + +  W SLL  C+LH
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVA-WTSLLSGCKLH 548

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             ++ A  VA KL E+++ +       LLSN+YAE G W   D VRK    R  RK  GC
Sbjct: 549 NDTKRAARVADKLFELESEDEHSTV-TLLSNVYAEAGRW---DDVRKTRNRRAARKNPGC 604

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S+I++   V+ F + D+ HP+   I   ++RL+ +M++AG
Sbjct: 605 SYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 269/579 (46%), Gaps = 73/579 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLK 115
           A  +F +I  P +V W  I+  F  N    EA+  Y +M  +   P    D   +   + 
Sbjct: 11  ALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP----DGAMFVVAIG 66

Query: 116 ACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            C+ +++L+ G+ +H   +          +  +L+ MY+ C                   
Sbjct: 67  VCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARC------------------R 108

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM---GIRPSTISFVN 231
             +L  K FD M ++ +V WN +++ Y +   +  A++ ++ M+     G++P  I+F +
Sbjct: 109 DLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSS 168

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A + +GD      +    V  G  Y +D  V ++ I MY++ G  + ARK+FD    
Sbjct: 169 ALYACTVVGDISQGREIEARTVASG--YASDSIVQNALINMYSKCGSLESARKVFDRLKN 226

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+   WNTMI GY +     +A+ELF Q +  ++   + VTF+  L+A + L++L+ G+ 
Sbjct: 227 RDVIAWNTMISGYAKQGAATQALELF-QRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRA 285

Query: 352 LHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNG 390
           +H  + ++     +++ N ++                      RDV++WN +I A+VQ G
Sbjct: 286 IHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYG 345

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
              + L +  +MQ +    + +T++ +LSA + L  +  GK  HA +       +  +E+
Sbjct: 346 QAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN 405

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L++MY + G +     +F      D+   +W+ +IA Y Q+G        F ++L+  +
Sbjct: 406 SLMNMYNRCGSLDDTVGVFAA--IRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGL 463

Query: 510 TPNVVTIASVLPACNPMGNIELGKQL-------HGFS--IRYLLDQNVFVGTSLIDMYSK 560
             + VT+ S L AC+  G ++ G Q        HG +   R+ L         ++D+ S+
Sbjct: 464 AADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFL--------CMVDLLSR 515

Query: 561 SGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
           +G +  A N+   +P   ++V +T+++ G   H  ++RA
Sbjct: 516 AGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRA 554



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 218/459 (47%), Gaps = 54/459 (11%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPY-TSCDNYTYSSVLK 115
           LAR+ FD + + T V WN +I G+  N     A+ +Y  M   SP     D  T+SS L 
Sbjct: 112 LARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALY 171

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC    ++  G+ +    +         V N+L+NMYS C S   A              
Sbjct: 172 ACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESAR------------- 218

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFD ++ R+V+AWNT++S Y K     +A+  F+ M     +P+ ++F+ +  A
Sbjct: 219 -----KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTA 273

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLERNT 294
            ++L D +    ++  + + G  Y +DL + +  + MY +     + AR++F+    R+ 
Sbjct: 274 CTNLEDLEQGRAIHRKVREDG--YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDV 331

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I  YVQ     +A+++F Q ++L+ +  +++T  + LSA + L     G+ +HA
Sbjct: 332 ITWNILIVAYVQYGQAKDALDIFKQ-MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHA 390

Query: 355 YIIKNFVALPVIVLN--------------------AVIERDVVSWNTMISAFVQNGLDDE 394
            I        V++ N                    A+ ++ +VSW+T+I+A+ Q+G    
Sbjct: 391 LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRT 450

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI-----HFEGME 448
           GL   +E+ ++G   D VT+ + LSA S+      G QT   ++  HG+     HF  M 
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCM- 509

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
              +D+ +++G ++ A  +   +     D   W ++++G
Sbjct: 510 ---VDLLSRAGRLEAAENLIH-DMPFLPDAVAWTSLLSG 544



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 227/455 (49%), Gaps = 34/455 (7%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + G    A  +F      N+  W  ++  + +N H  EA+  + +++ L+ +  D  
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMV-LEGLRPDGA 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKN-FVALPVIVLNAVI------------------ 372
            F+ A+   S  ++L  GQ LHA I++   +   +I+  A+I                  
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYE----MQKQGFMIDSVTVTALLSAASNLRN 426
             ++ +V+WN +I+ + +NG D  G + +Y+       +G   D++T ++ L A + + +
Sbjct: 120 MGKKTLVTWNALIAGYSRNG-DHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178

Query: 427 QDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
              G++  A  +  G   + + ++ LI+MY+K G +++AR++F++    +RD   WN MI
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDR--LKNRDVIAWNTMI 236

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           +GY + G   +A   F++M  ++  PNVVT   +L AC  + ++E G+ +H        +
Sbjct: 237 SGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYE 296

Query: 546 QNVFVGTSLIDMYSK-SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
            ++ +G  L++MY+K S  +  A  VF ++  ++ +T+  +I+ Y Q+G ++ AL +F+ 
Sbjct: 297 SDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQ 356

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M+   + P+ IT   VLSAC+  G   +G  +  L+    + +        + +M  R G
Sbjct: 357 MQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASG-RCKADVVLENSLMNMYNRCG 415

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
            + +       + ++   L  W +L+ +   HGHS
Sbjct: 416 SLDDTVGVFAAIRDKS--LVSWSTLIAAYAQHGHS 448



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 2/174 (1%)

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY K G +  A  VF  I   NSV++T ++  + ++G    AL  +R M   G+ PD   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
           FV  +  CS +  + +G  +  ++ +   ++        +  M  R   +  A +   E+
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           G++   L  W +L+     +G    A  + + ++        P      S +YA
Sbjct: 121 GKK--TLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYA 172


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 190/538 (35%), Positives = 310/538 (57%), Gaps = 27/538 (5%)

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D+A  IF++  +  +  +N MI G      P  A+ LF ++ E   +  D  TF S L A
Sbjct: 72  DYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHE-KSVQHDKFTFSSVLKA 130

Query: 340 VSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSW 379
            S+++ L  G+Q+HA I+K+      FV   +I              V + + ER +V+W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N+M+S + +NGL DE + L  ++ +     D VT+ ++L A   L N ++G+    Y++ 
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 440 HGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+     + + LIDMYAK G + TAR++F++ D   RD   W+AMI+GY Q    +EA 
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDK--RDVVAWSAMISGYAQADRCKEAL 308

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             F +M + NV PN VT+ SVL +C  +G  E GK +H +  +  +   V +GT LID Y
Sbjct: 309 NLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFY 368

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           +K G I+ +  VF ++  KN  T+T +I G   +G  + AL  F SM    ++P+ +TF+
Sbjct: 369 AKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFI 428

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            VLSACS+A LVD+G  +F+ M++++ I+P  EHY C+ D+LGR G + EAY+F+  +  
Sbjct: 429 GVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPF 488

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
             N + +W +LL SCR H + E+AE   + +  ++  +S  G ++LLSN YA  G  E+ 
Sbjct: 489 PPNAV-VWRTLLASCRAHKNIEMAEKSLEHITRLEPAHS--GDYILLSNTYALVGRVEDA 545

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +VR  ++E+ ++K  GCS I++ G V+ F S+D EH  S +I++ L+++  +++  G
Sbjct: 546 IRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLG 603



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 261/542 (48%), Gaps = 50/542 (9%)

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D    +F+ + +    A+N ++           A+  F+ M    ++    +F +V  A 
Sbjct: 72  DYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKAC 131

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S +   +  + V+ L++K G  + ++ FV ++ I MYA  G    AR +FD   ER+   
Sbjct: 132 SRMKALREGEQVHALILKSG--FKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVA 189

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M+ GY +N    E ++LF ++LEL  I FDDVT +S L A  +L  L++G+ +  YI
Sbjct: 190 WNSMLSGYTKNGLWDEVVKLFRKILEL-RIEFDDVTMISVLMACGRLANLEIGELIGEYI 248

Query: 357 I------KNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +       N +   +I              + + + +RDVV+W+ MIS + Q     E L
Sbjct: 249 VSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEAL 308

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
            L +EMQK     + VT+ ++L + + L   + GK  H Y+ +  +     + + LID Y
Sbjct: 309 NLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFY 368

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G I  + ++F+  +   ++  TW A+I G   NG  + A   F  MLE++V PN VT
Sbjct: 369 AKCGYIDRSVEVFK--EMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426

Query: 516 IASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
              VL AC+    ++ G+ L     R + ++  +     ++D+  ++G +  A      +
Sbjct: 427 FIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM 486

Query: 575 P-EKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDAITFVAVLSACSYA--G 628
           P   N+V + T++     H    M+E++L     +     EP A +   +L + +YA  G
Sbjct: 487 PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRL-----EP-AHSGDYILLSNTYALVG 540

Query: 629 LVDEGLQIFDLM-QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
            V++ +++  L+ ++E K  P     C + ++ G V      +EF  E GE  +  EI  
Sbjct: 541 RVEDAIRVRSLIKEKEIKKIPG----CSLIELDGVV------HEFFSEDGEHKHSKEIHD 590

Query: 688 SL 689
           +L
Sbjct: 591 AL 592



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 232/537 (43%), Gaps = 80/537 (14%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHL---ARQLFDSITRPTTVIWNTII 77
           P  L Q+H+      +L  P I   + +      P     A  +F+ I +P +  +N +I
Sbjct: 34  PKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMI 93

Query: 78  IGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
            G      P  A+LL+ +M + S     D +T+SSVLKAC+  + LR G+ VH   ++  
Sbjct: 94  RGLAFKRSPDNALLLFKKMHEKS--VQHDKFTFSSVLKACSRMKALREGEQVHALILKSG 151

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
              + FV N+L+ MY+ C                   +  +   VFD M  R++VAWN++
Sbjct: 152 FKSNEFVENTLIQMYANC------------------GQIGVARHVFDGMPERSIVAWNSM 193

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           +S Y K   + E V+ FR +L + I    ++ ++V  A   L + +  +++   +V  G 
Sbjct: 194 LSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGL 253

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
              N L   +S I MYA+ G  D ARK+FD   +R+   W+ MI GY Q +   EA+ LF
Sbjct: 254 RRNNTL--TTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLF 311

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            + ++   +  ++VT +S L + + L   + G+ +H YI K  + L V +   +I+    
Sbjct: 312 HE-MQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           ++V +W  +I     NG     L     M +     + VT   +
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           LSA S           HA L+  G H                L  + R+ F+     +  
Sbjct: 431 LSACS-----------HACLVDQGRH----------------LFNSMRRDFDIEPRIEH- 462

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
              +  M+    + G LEEA+     M      PN V   ++L +C    NIE+ ++
Sbjct: 463 ---YGCMVDILGRAGFLEEAYQFIDNM---PFPPNAVVWRTLLASCRAHKNIEMAEK 513



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 5/151 (3%)

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I+YA ++F  I +  S  Y  MI G       + AL LF+ M    ++ D  TF +VL 
Sbjct: 70  TIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLK 129

Query: 623 ACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           ACS    + EG Q+  L ++  +K     E+   +  M    G++  A      + E   
Sbjct: 130 ACSRMKALREGEQVHALILKSGFKSNEFVEN--TLIQMYANCGQIGVARHVFDGMPERSI 187

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           V   W S+L     +G  +    + +K+LE+
Sbjct: 188 V--AWNSMLSGYTKNGLWDEVVKLFRKILEL 216


>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 197/574 (34%), Positives = 321/574 (55%), Gaps = 39/574 (6%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L + +  + F+A+  +  YA  G    +R +F++   ++  +WN++I GYV+N+   +A+
Sbjct: 55  LANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQAL 114

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-- 372
            LF + +  + ++ DD T  +      +L++L  G+ +H   I+      V+V N+++  
Sbjct: 115 ALFRE-MGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSM 173

Query: 373 ------------------ERDVVSWNTMIS--AFVQN---GLDDEGLMLVYEMQKQGFMI 409
                              R+V S+N +IS  A ++N      D+       MQ +GF  
Sbjct: 174 YCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKA 233

Query: 410 DSVTVTALLS-AASNLRNQDVGKQTHAYLLRHGIHFE-----GMESYLIDMYAKSGLIKT 463
           D+ TV +LL     +    D G++ H Y++++G+  +      + S LIDMY++S  +  
Sbjct: 234 DAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVL 293

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPA 522
            R++F++    +R+   W AMI GY QNG  ++A V  R M ++  + PN V++ S LPA
Sbjct: 294 GRRVFDQMK--NRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPA 351

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNSVT 581
           C  +  +  GKQ+HGFSI+  L+ +V +  +LIDMYSK G ++YA   F      K+++T
Sbjct: 352 CGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAIT 411

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +++MI  YG HG  E A+  +  M   G +PD IT V VLSACS +GLVDEG+ I+  + 
Sbjct: 412 WSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLM 471

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
            +Y+I+P+ E   CV DMLGR G++ +A EF+KE+  +     +WGSLL +  +HG+S  
Sbjct: 472 TKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGP-SVWGSLLTASVIHGNSRT 530

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
            ++  + LLE++  N  P  ++ LSN YA +  W+ V +VR  M+ERGL+K  GCSWI +
Sbjct: 531 RDLAYRHLLELEPEN--PSNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITI 588

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
            G  + F+  D+ HP S  IYEML  L   M + 
Sbjct: 589 SGKTHSFSVADKAHPSSSLIYEMLGDLVSIMTDG 622



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 237/495 (47%), Gaps = 53/495 (10%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+ C + R+ ++ +  H   +      + F+   L++ Y+TC              E+ 
Sbjct: 34  LLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATC-------------GELA 80

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S++     VF+++  ++V  WN++++ YVK   + +A+  FR M R G+ P   +   V
Sbjct: 81  TSRF-----VFESVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATV 135

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F     L D  S  +++G  +++G  +V+D+ V +S + MY   G F  A K+FD    R
Sbjct: 136 FKVFGELEDLVSGKLIHGKGIRIG--FVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHR 193

Query: 293 NTEVWNTMIGGYVQ----NNHPVEAIELFVQVLELDEIVFDDVTFLSALS-AVSQLQELD 347
           N   +N +I G       N    + +  F   ++ +    D  T  S L        + D
Sbjct: 194 NVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWD 253

Query: 348 LGQQLHAYIIKNF------------------------VALPVIVLNAVIERDVVSWNTMI 383
            G++LH Y++KN                         V L   V + +  R+V  W  MI
Sbjct: 254 YGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMI 313

Query: 384 SAFVQNGLDDEGLMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           + +VQNG  D+ L+L+  MQ K G   + V++ + L A   L     GKQ H + ++  +
Sbjct: 314 NGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMEL 373

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           + +  + + LIDMY+K G +  AR+ FE + S  +D  TW++MI+ Y  +G  EEA +A+
Sbjct: 374 NDDVSLCNALIDMYSKCGSLDYARRAFETS-SYFKDAITWSSMISAYGLHGRGEEAIIAY 432

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYSK 560
            +ML+    P+++T+  VL AC+  G ++ G  ++     +Y +   V +   ++DM  +
Sbjct: 433 YKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGR 492

Query: 561 SGVINYAANVFAKIP 575
           SG ++ A     ++P
Sbjct: 493 SGQLDQALEFIKEMP 507



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 219/485 (45%), Gaps = 52/485 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    +R +F+S+   +  +WN++I G+V N+   +A+ L+ +M ++      D+YT ++
Sbjct: 77  GELATSRFVFESVEAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLP--DDYTLAT 134

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V K   E  +L  GK +H   IR        V NSL++MY  C    DA           
Sbjct: 135 VFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDA----------- 183

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE--RYVEAVRQFRMMLRM---GIRPSTI 227
                   KVFD    RNV ++N ++S     E   +          LRM   G +    
Sbjct: 184 -------VKVFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAF 236

Query: 228 SFVNVFP-ALSSLGDYKSADVVYGLLVKLGSEYV--NDLFVASSAIFMYAELGCFDFARK 284
           +  ++ P      G +     ++  +VK G +    +D+ + SS I MY+        R+
Sbjct: 237 TVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRR 296

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD    RN  VW  MI GYVQN  P +A+ L   +   D I  + V+ +SAL A   L 
Sbjct: 297 VFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLA 356

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMI 383
            L  G+Q+H + IK  +   V + NA+I+                     +D ++W++MI
Sbjct: 357 GLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMI 416

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           SA+  +G  +E ++  Y+M +QGF  D +TV  +LSA S     D G   +  L+     
Sbjct: 417 SAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEI 476

Query: 444 FEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
              +E  + ++DM  +SG +  A + F K    D   + W +++     +G      +A+
Sbjct: 477 KPTVEICACVVDMLGRSGQLDQALE-FIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAY 535

Query: 502 RQMLE 506
           R +LE
Sbjct: 536 RHLLE 540



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 24/271 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           L R++FD +      +W  +I G+V N  P +A++L   M+        +  +  S L A
Sbjct: 293 LGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRP-NKVSLISALPA 351

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C     L  GK +H   I+   N    + N+L++MYS C S             +DY++ 
Sbjct: 352 CGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGS-------------LDYAR- 397

Query: 177 DLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
               + F+T    ++ + W++++S Y    R  EA+  +  ML+ G +P  I+ V V  A
Sbjct: 398 ----RAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSA 453

Query: 236 LSSLGDYKSADVVY-GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERN 293
            S  G       +Y  L+ K   E    + + +  + M    G  D A +      L+  
Sbjct: 454 CSKSGLVDEGISIYKSLMTKY--EIKPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPG 511

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
             VW +++   V + +       +  +LEL+
Sbjct: 512 PSVWGSLLTASVIHGNSRTRDLAYRHLLELE 542



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           ++  +L  C  + + +L +Q H   +     QN F+ T L+  Y+  G +  +  VF  +
Sbjct: 30  SLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV 89

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
             K+   + ++I GY ++    +AL+LFR M   G+ PD  T   V 
Sbjct: 90  EAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVF 136


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 209/650 (32%), Positives = 348/650 (53%), Gaps = 34/650 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           VF  M  RN+ +WN +V  Y K   + EA+  + RM+   G++P   +F  V      + 
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+  +V+ G E   D+ V ++ I MY + G    AR +FD    R+   WN M
Sbjct: 211 DLARGKEVHVHVVRYGYEL--DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY +N    E +ELF  +  L  +  D +T  S +SA   L +  LG+ +HAY+I   
Sbjct: 269 ISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            A+ + V N++ +                    +D+VSW TMIS +  N L D+ +    
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESYLIDMYAKSG 459
            M +     D +TV A+LSA + L + D G + H   ++   I +  + + LI+MY+K  
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A  IF  ++   ++  +W ++IAG   N    EA +  RQM +  + PN +T+ + 
Sbjct: 448 CIDKALDIF--HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAA 504

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G +  GK++H   +R  +  + F+  +L+DMY + G +N A + F    +K+ 
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDV 563

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            ++  ++ GY + G     + LF  M    + PD ITF+++L  CS + +V +GL  F  
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+ +Y + P+ +HY CV D+LGR G++ EA++F++++    +   +WG+LL +CR+H   
Sbjct: 624 ME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP-AVWGALLNACRIHHKI 681

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L E+ A+ + E+D ++   GY++LL N+YA+ G W  V KVR+ M+E GL  + GCSW+
Sbjct: 682 DLGELSAQHIFELDKKS--VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG-NKTIQNSNVDAT 808
           +V G V+ F S D+ HPQ+ +I  +LE    +M   G  K  ++S++D T
Sbjct: 740 EVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 206/399 (51%), Gaps = 25/399 (6%)

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF--MYAELGCFDFARKIFDN 288
           +VF AL  L ++K A      +  +    ++ L V     F  M+   G    A  +F  
Sbjct: 95  DVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERN   WN ++GGY +  +  EA+ L+ ++L +  +  D  TF   L     + +L  
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+++H ++++    L + V+NA+I                     RD++SWN MIS + +
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           NG+  EGL L + M+      D +T+T+++SA   L ++ +G+  HAY++  G   +  +
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L  MY  +G  + A ++F + +   +D  +W  MI+GY  N L ++A   +R M + 
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +V P+ +T+A+VL AC  +G+++ G +LH  +I+  L   V V  +LI+MYSK   I+ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
            ++F  IP KN +++T++I G   +     AL   R MK
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 8/308 (2%)

Query: 336 ALSAVSQLQELDLGQQLHAYIIK--NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
           ALS++S L  ++LG    A  ++  N V     V   + ER++ SWN ++  + + G  D
Sbjct: 120 ALSSMSSLG-VELGNAFLAMFVRFGNLVD-AWYVFGKMSERNLFSWNVLVGGYAKQGYFD 177

Query: 394 EGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           E + L + M    G   D  T   +L     + +   GK+ H +++R+G   +  + + L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I MY K G +K+AR +F++     RD  +WNAMI+GY +NG+  E    F  M   +V P
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +++T+ SV+ AC  +G+  LG+ +H + I      ++ V  SL  MY  +G    A  +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
           +++  K+ V++TTMI GY  + + ++A+  +R M    ++PD IT  AVLSAC+  G +D
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415

Query: 632 EGLQIFDL 639
            G+++  L
Sbjct: 416 TGVELHKL 423



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 215/459 (46%), Gaps = 67/459 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + R   + WN +I G+  N + +E + L+  M+  S     D  T +SV+ AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS--VDPDLMTLTSVISAC 307

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               + R+G+ +H + I         V NSL  MY    S  +AE               
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE--------------- 352

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  M R+++V+W T++S Y       +A+  +RMM +  ++P  I+   V  A +
Sbjct: 353 ---KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +LGD  +   ++ L +K  +  ++ + VA++ I MY++  C D A  IF N   +N   W
Sbjct: 410 TLGDLDTGVELHKLAIK--ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I G   NN   EA+ +F++ +++  +  + +T  +AL+A +++  L  G+++HA+++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVL 525

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +  V L   + NA+++                   +DV SWN +++ + + G     + L
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVEL 585

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY------- 450
              M K     D +T  +LL   S            + ++R G+ +F  ME Y       
Sbjct: 586 FDRMVKSRVRPDEITFISLLCGCSK-----------SQMVRQGLMYFSKMEDYGVTPNLK 634

Query: 451 ----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
               ++D+  ++G ++ A +  +K      D A W A++
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTP-DPAVWGALL 672


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 206/627 (32%), Positives = 331/627 (52%), Gaps = 29/627 (4%)

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           ++  N  +S Y+ + +Y   ++ F  M+   +    ++F+ +      +        V+ 
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           + +KLG + +  L V++S I MY +L  F FAR +FDN  ER+   WN++I G  QN   
Sbjct: 340 MALKLGLDLM--LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLE 397

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIK------NFVAL 363
           VEA+ LF+Q+L    +  D  T  S L A S L E L L +Q+H + IK      +FV+ 
Sbjct: 398 VEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456

Query: 364 PVI----------VLNAVIER---DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
            +I              + ER   D+V+WN M++ + Q+    + L L   M KQG   D
Sbjct: 457 ALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
             T+  +      L   + GKQ HAY ++ G   +  + S ++DMY K G +  A+  F+
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                D     W  MI+G  +NG  E AF  F QM    V P+  TIA++  A + +  +
Sbjct: 577 SIPVPD--DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E G+Q+H  +++     + FVGTSL+DMY+K G I+ A  +F +I   N   +  M++G 
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            QHG  +  L LF+ MK  GI+PD +TF+ VLSACS++GLV E  +    M  +Y I+P 
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY C+AD LGR G V +A   ++ +  E +   ++ +LL +CR+ G +E  + VA KL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASA-SMYRTLLAACRVQGDTETGKRVATKL 813

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE++  +S    +VLLSN+YA    W+ +   R  M+   ++K+ G SWI+V   ++ F 
Sbjct: 814 LELEPLDSSA--YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV 871

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
             D+ + Q+  IY  ++ +  +++  G
Sbjct: 872 VDDRSNRQTELIYRKVKDMIRDIKQEG 898



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 174/689 (25%), Positives = 310/689 (44%), Gaps = 94/689 (13%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGF------VCNNLPYEAILLYSQ 95
           I + +S   + G    AR++FD +     V WN+I+  +      V  N+  +A LL+  
Sbjct: 77  INNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ-QAFLLFRI 135

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           +++   YTS    T S +LK C  +  +   ++ H +  +   +   FV  +L+N+Y   
Sbjct: 136 LRQDVVYTS--RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY--- 190

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                     LK+ +V   K      +F+ M  R+VV WN ++  Y++     EA+    
Sbjct: 191 ----------LKFGKVKEGKV-----LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                G+ P+ I+ + +   +S  GD   A  V        +  V+++   +  +  Y  
Sbjct: 236 AFHSSGLNPNEIT-LRLLARIS--GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G +    K F + +E + E                                 D VTF+ 
Sbjct: 293 SGQYSALLKCFADMVESDVEC--------------------------------DQVTFIL 320

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            L+   ++  L LGQQ+H   +K  + L + V N++I                    ERD
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL-RNQDVGKQTH 434
           ++SWN++I+   QNGL+ E + L  ++ + G   D  T+T++L AAS+L     + KQ H
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440

Query: 435 AYLLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            + ++ + +    + + LID Y+++  +K A  +FE+++    D   WNAM+AGYTQ+  
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHD 497

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             +    F  M +     +  T+A+V   C  +  I  GKQ+H ++I+   D +++V + 
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           ++DMY K G ++ A   F  IP  + V +TTMI G  ++G  ERA  +F  M+  G+ PD
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYE 671
             T   +  A S    +++G QI        K+  + + +    + DM  + G + +AY 
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
             K +  E   +  W ++L     HG  +
Sbjct: 675 LFKRI--EMMNITAWNAMLVGLAQHGEGK 701



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 276/591 (46%), Gaps = 63/591 (10%)

Query: 87  YEAIL-LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
           Y A+L  ++ M +S     CD  T+  +L    +  +L +G+ VHC  ++   +    V 
Sbjct: 296 YSALLKCFADMVESD--VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSL+NMY                      K+     VFD M  R++++WN++++   +  
Sbjct: 354 NSLINMY------------------CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS-ADVVYGLLVKLGSEYVNDLF 264
             VEAV  F  +LR G++P   +  +V  A SSL +  S +  V+   +K+ +  V+D F
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSF 453

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLE 322
           V+++ I  Y+   C   A  +F+     N ++  WN M+ GY Q++   + ++LF  + +
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER-------- 374
             E   DD T  +       L  ++ G+Q+HAY IK+   L + V + +++         
Sbjct: 511 QGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569

Query: 375 ------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
                       D V+W TMIS  ++NG ++    +  +M+  G + D  T+  L  A+S
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629

Query: 423 NLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            L   + G+Q HA  L+       F G  + L+DMYAK G I  A  +F++ +    +  
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM--MNIT 685

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQLHGF 538
            WNAM+ G  Q+G  +E    F+QM    + P+ VT   VL AC+  G + E  K +   
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSER 597
              Y +   +   + L D   ++G++  A N+   +  E ++  Y T++      G +E 
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805

Query: 598 ALSLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
              +  + K   +EP D+  +V + +  + A   DE +++   M + +K++
Sbjct: 806 GKRV--ATKLLELEPLDSSAYVLLSNMYAAASKWDE-MKLARTMMKGHKVK 853



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 141/530 (26%), Positives = 250/530 (47%), Gaps = 43/530 (8%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L+    + +L +GK  H   +    NP RF+ N+L++MYS C S        L Y     
Sbjct: 46  LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGS--------LTYAR--- 94

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVK-TERYVEAVRQ----FRMMLRMGIRPSTIS 228
                  +VFD M  R++V+WN+I++ Y + +E  VE ++Q    FR++ +  +  S ++
Sbjct: 95  -------RVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
              +       G   +++  +G   K+G +   D FVA + + +Y + G     + +F+ 
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLD--GDEFVAGALVNIYLKFGKVKEGKVLFEE 205

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+  +WN M+  Y++     EAI+L         +  +++T L  L+ +S   + D 
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEIT-LRLLARISG-DDSDA 262

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           GQ      +K+F        +A    +++  N  +S ++ +G     L    +M +    
Sbjct: 263 GQ------VKSFANGN----DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
            D VT   +L+ A  + +  +G+Q H   L+ G+     + + LI+MY K      AR +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM- 526
           F+  +  +RD  +WN++IAG  QNGL  EA   F Q+L   + P+  T+ SVL A + + 
Sbjct: 373 FD--NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             + L KQ+H  +I+     + FV T+LID YS++  +  A  +F +    + V +  M+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            GY Q     + L LF  M   G   D  T   V   C +   +++G Q+
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 212/475 (44%), Gaps = 62/475 (13%)

Query: 26  QIHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+H ++  +   L      S ++  C+  +   AR +FD+++    + WN++I G   N 
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET-RNLRIGKAVHCHFIRCFSNPSRF 143
           L  EA+ L+ Q+ +       D YT +SVLKA +     L + K VH H I+  +    F
Sbjct: 396 LEVEAVCLFMQLLRCG--LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453

Query: 144 VYNSLLNMYS--TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
           V  +L++ YS   C          +K  E+ + +++            ++VAWN +++ Y
Sbjct: 454 VSTALIDAYSRNRC----------MKEAEILFERHNF-----------DLVAWNAMMAGY 492

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            ++    + ++ F +M + G R    +   VF     L        V+   +K G  Y  
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG--YDL 550

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           DL+V+S  + MY + G    A+  FD+    +   W TMI G ++N     A  +F Q +
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ-M 609

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVIVLNA----- 370
            L  ++ D+ T  +   A S L  L+ G+Q+HA  +K       FV   ++ + A     
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669

Query: 371 -----VIER----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                + +R    ++ +WN M+    Q+G   E L L  +M+  G   D VT   +LSA 
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GME------SYLIDMYAKSGLIKTARQIFE 469
           S+      G  + AY     +H + G++      S L D   ++GL+K A  + E
Sbjct: 730 SH-----SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 24/221 (10%)

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID----MYAKSGLI 461
           GF+ +++T + L+          +GK THA +L      E  E +LI+    MY+K G +
Sbjct: 44  GFLRNAITSSDLM----------LGKCTHARILTFE---ENPERFLINNLISMYSKCGSL 90

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-----LEEAFVAFRQMLEHNVTPNVVTI 516
             AR++F+K    DRD  +WN+++A Y Q+       +++AF+ FR + +  V  + +T+
Sbjct: 91  TYARRVFDKMP--DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTL 148

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           + +L  C   G +   +  HG++ +  LD + FV  +L+++Y K G +     +F ++P 
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           ++ V +  M+  Y + G  E A+ L  +    G+ P+ IT 
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 228/768 (29%), Positives = 365/768 (47%), Gaps = 77/768 (10%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            GR   AR LFD +     V+WN ++  +V   L YEA+LL+S+  ++             
Sbjct: 776  GRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTG------------ 823

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL--LNMYSTCLSSLDAEMVGLKYVE 170
                      LR      C   R   +    +   L  L  Y T L   D +  G     
Sbjct: 824  ----------LRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDG----- 868

Query: 171  VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                               +V+AWN  +SW+++     EAV  F  M+   +    ++FV
Sbjct: 869  ------------------SDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFV 910

Query: 231  NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
             +   ++ L   +    ++G++V+ G + V  + V +  I MY + G    AR +F    
Sbjct: 911  VMLSVVAGLNCLELGKQIHGIVVRSGLDQV--VSVGNCLINMYVKTGSVSRARTVFWQMN 968

Query: 291  ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLG 349
            E +   WNTMI G   +     ++ +FV +L    ++ D  T  S L A S L     L 
Sbjct: 969  EVDLVSWNTMISGCALSGLEECSVGMFVDLLR-GGLLPDQFTVASVLRACSSLGGGCHLA 1027

Query: 350  QQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQN 389
             Q+HA  +K  V L   V   +I+                     D+ SWN M+  ++ +
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087

Query: 390  GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
            G   + L L   MQ+ G   + +T+     AA  L     GKQ  A +++ G + +  + 
Sbjct: 1088 GDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVI 1147

Query: 449  SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            S ++DMY K G +++AR+IF  N+    D   W  MI+G  +NG  E A   +  M    
Sbjct: 1148 SGVLDMYLKCGEMESARRIF--NEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSK 1205

Query: 509  VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            V P+  T A+++ AC+ +  +E G+Q+H  +++     + FV TSL+DMY+K G I  A 
Sbjct: 1206 VQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDAR 1265

Query: 569  NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
             +F +       ++  MI+G  QHG +E AL  F  MK  G+ PD +TF+ VLSACS++G
Sbjct: 1266 GLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSG 1325

Query: 629  LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            LV E  + F  MQ+ Y I+P  EHY C+ D L R G++ EA + +  +  E +   ++ +
Sbjct: 1326 LVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASA-SMYRT 1384

Query: 689  LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
            LL +CR+    E  + VA+KLL ++  +S    +VLLSN+YA    WENV   R  MR+ 
Sbjct: 1385 LLNACRVQVDRETGKRVAEKLLALEPSDSAA--YVLLSNVYAAANQWENVASARNMMRKA 1442

Query: 749  GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             ++K+ G SW+D+   V+ F + D+ H ++  IY  +E +   +R  G
Sbjct: 1443 NVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEG 1490



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 173/688 (25%), Positives = 314/688 (45%), Gaps = 84/688 (12%)

Query: 58   ARQLFDSI--TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
            AR+LFD+   T    V WN I+      +   +   L+  +++S  + S   +T + V K
Sbjct: 680  ARKLFDTTPDTSRDLVTWNAILSAHA--DKARDGFHLFRLLRRS--FVSATRHTLAPVFK 735

Query: 116  ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
             C  + +    +++H + ++       FV  +L+N+Y+             K+  +  ++
Sbjct: 736  MCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYA-------------KFGRIREAR 782

Query: 176  YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                  +FD M  R+VV WN ++  YV T    EA+  F    R G+RP  ++   +   
Sbjct: 783  V-----LFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARV 837

Query: 236  LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +      KS   V    +K    Y        + +FMY +                 +  
Sbjct: 838  V------KSKQNVLEWQLKQLKAY-------GTKLFMYDDD------------DDGSDVI 872

Query: 296  VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
             WN  +  ++Q     EA++ FV ++    +  D +TF+  LS V+ L  L+LG+Q+H  
Sbjct: 873  AWNKTLSWFLQRGETWEAVDCFVDMIN-SRVACDGLTFVVMLSVVAGLNCLELGKQIHGI 931

Query: 356  IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            ++++ +   V V N +I                    E D+VSWNTMIS    +GL++  
Sbjct: 932  VVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECS 991

Query: 396  LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEG-MESYLID 453
            + +  ++ + G + D  TV ++L A S+L     +  Q HA  ++ G+  +  + + LID
Sbjct: 992  VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051

Query: 454  MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            +Y+KSG ++ A  +F   D    D A+WNAM+ GY  +G   +A   +  M E     N 
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDG--FDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQ 1109

Query: 514  VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            +T+A+   A   +  ++ GKQ+    ++   + ++FV + ++DMY K G +  A  +F +
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169

Query: 574  IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            IP  + V +TTMI G  ++G  E AL  +  M+   ++PD  TF  ++ ACS    +++G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229

Query: 634  LQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
             QI        K+  + + +    + DM  + G + +A    K      + +  W +++ 
Sbjct: 1230 RQIH---ANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNT--SRIASWNAMIV 1284

Query: 692  SCRLHGHSELAEVVAKKLLEMDTRNSMP 719
                HG++E A    +   EM +R   P
Sbjct: 1285 GLAQHGNAEEA---LQFFEEMKSRGVTP 1309



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 276/598 (46%), Gaps = 41/598 (6%)

Query: 112  SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            S+L+      +L +GK  H   +    +P RF+ N+L+ MYS C S   A          
Sbjct: 631  SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSAR--------- 681

Query: 172  DYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                     K+FDT     R++V WN I+S +    R  +    FR++ R  +  +  + 
Sbjct: 682  ---------KLFDTTPDTSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTL 730

Query: 230  VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
              VF          +A+ ++G  VK+G ++  D+FVA + + +YA+ G    AR +FD  
Sbjct: 731  APVFKMCLLSASPSAAESLHGYAVKIGLQW--DVFVAGALVNIYAKFGRIREARVLFDGM 788

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              R+  +WN M+  YV      EA+ LF +      +  DDVT  +    V   Q +   
Sbjct: 789  GLRDVVLWNVMMKAYVDTGLEYEALLLFSE-FNRTGLRPDDVTLCTLARVVKSKQNVLEW 847

Query: 350  Q--QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            Q  QL AY  K F     +  +     DV++WN  +S F+Q G   E +    +M     
Sbjct: 848  QLKQLKAYGTKLF-----MYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRV 902

Query: 408  MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQ 466
              D +T   +LS  + L   ++GKQ H  ++R G+     + + LI+MY K+G +  AR 
Sbjct: 903  ACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRART 962

Query: 467  IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
            +F + +  + D  +WN MI+G   +GL E +   F  +L   + P+  T+ASVL AC+ +
Sbjct: 963  VFWQMN--EVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020

Query: 527  -GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
             G   L  Q+H  +++  +  + FV T+LID+YSKSG +  A  +F      +  ++  M
Sbjct: 1021 GGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAM 1080

Query: 586  ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD-LMQQEY 644
            + GY   G   +AL L+  M+  G   + IT      A      + +G QI   ++++ +
Sbjct: 1081 MHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGF 1140

Query: 645  KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +         V DM  + G++  A     E+    +V   W +++  C  +G  E A
Sbjct: 1141 NLDLFV--ISGVLDMYLKCGEMESARRIFNEIPSPDDV--AWTTMISGCVENGQEEHA 1194


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 230/703 (32%), Positives = 362/703 (51%), Gaps = 58/703 (8%)

Query: 70  TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
            V WNT+I     +  P EA+ +Y  M +     +  N+T +SVL AC     L  G+  
Sbjct: 6   AVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPT--NFTLASVLSACGAVAALDDGRRC 63

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           H   ++   +  +FV N LL MY+ C S  DA                   ++FD M   
Sbjct: 64  HGLAVKVGLDGHQFVENGLLGMYTKCGSVADA------------------VRLFDGMPSP 105

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR--PSTISFVNVFPALSSLGDY----- 242
           N V++  ++    +     +A+R F  M R GIR  P  +S V    A +  GDY     
Sbjct: 106 NEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARA 165

Query: 243 -KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            + A  ++ L+V+ G  + +D  V +S + +YA+    D A K+F++    +   WN +I
Sbjct: 166 IQLAQSIHALVVRKG--FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILI 223

Query: 302 GGYVQNNHPVEAIELFVQVLE-LDEIVFD--DVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            GY Q    +   E  ++VLE + E  F+  +VT+ + L++  + +++   + +      
Sbjct: 224 TGYGQ----LGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSARAM------ 273

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
            F  +P        +  V +WNT++S + Q  L  E + L   MQ Q    D  T+  +L
Sbjct: 274 -FDKIP--------KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVIL 324

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           S+ S L N ++GKQ H+  +R  +H +  + S LID+Y+K G +  A  IF  N   +RD
Sbjct: 325 SSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIF--NMMTERD 382

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
              WN+MI+G   + L EEAF   +QM E+ + P   + AS++  C  + +I  G+Q+H 
Sbjct: 383 VVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHA 442

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
             ++   DQNV+VG SLIDMY+KSG ++ A   F  +  KN V +  MI GY Q+G  E+
Sbjct: 443 QVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEK 502

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           A+ LF  M     +PD++TF+AVL+ CS++GLVDE +  F+ M+  Y I P  EHY C+ 
Sbjct: 503 AVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLI 562

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D L R  +  E    + ++  + + + +W  LL +C +H ++EL E  AK L  +D +N 
Sbjct: 563 DALARAARFAEVEAVIGKMPYKDDPI-LWEVLLAACVVHHNAELGEFSAKHLFRLDPKNP 621

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
            P  +VLLSNIYA  G   +   VR  M  RG+ K  G SW++
Sbjct: 622 SP--YVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 662



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 239/515 (46%), Gaps = 68/515 (13%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  RN V+WNT+++   ++    EA+  ++ ML+ G+ P+  +  +V  A  ++      
Sbjct: 1   MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
              +GL VK+G +     FV +  + MY + G    A ++FD     N   +  M+GG  
Sbjct: 61  RRCHGLAVKVGLD--GHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLA 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ--------LQELDLGQQLHAYII 357
           Q     +A+ LF + +    I  D V   S L A +Q         + + L Q +HA ++
Sbjct: 119 QGGAVDDALRLFAR-MSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVV 177

Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
           +        V N++++                      +VSWN +I+ + Q G  +  + 
Sbjct: 178 RKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAME 237

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           ++  MQ+ GF  + VT + +L  AS ++ +DV                            
Sbjct: 238 VLEFMQESGFEPNEVTYSNML--ASCIKARDV---------------------------- 267

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
                +AR +F+K         TWN +++GY Q  L +E    FR+M   NV P+  T+A
Sbjct: 268 ----PSARAMFDKIPK--PSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 321

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            +L +C+ +GN ELGKQ+H  S+R LL  ++FV + LID+YSK G +  A  +F  + E+
Sbjct: 322 VILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER 381

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + V + +MI G   H +SE A    + M+  G+ P   ++ ++++ C+    + +G Q+ 
Sbjct: 382 DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMH 441

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
             + ++   Q +    C + DM  + G + +A  F
Sbjct: 442 AQVLKDGYDQ-NVYVGCSLIDMYAKSGNMDDARLF 475



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 144/309 (46%), Gaps = 23/309 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD I +P+   WNT++ G+    L  E I L+ +M+  +     D  T + +L +C
Sbjct: 270 ARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQN--VQPDRTTLAVILSSC 327

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   N  +GK VH   +R   +   FV + L+++YS C        VG+  +        
Sbjct: 328 SRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKC------GQVGIALI-------- 373

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F+ M  R+VV WN+++S         EA    + M   G+ P+  S+ ++    +
Sbjct: 374 ----IFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCA 429

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        ++  ++K G  Y  +++V  S I MYA+ G  D AR  F+  + +N   W
Sbjct: 430 RLSSIPQGRQMHAQVLKDG--YDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAW 487

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN    +A+ELF  +L   +   D VTF++ L+  S    +D        + 
Sbjct: 488 NEMIHGYAQNGFGEKAVELFEYMLTTKQKP-DSVTFIAVLTGCSHSGLVDEAVTFFNSME 546

Query: 358 KNFVALPVI 366
            N+   P++
Sbjct: 547 SNYGITPLV 555



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 21/216 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q+HS S  +       + S L  I  + G+  +A  +F+ +T    V WN++I G   ++
Sbjct: 338 QVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHS 397

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L  EA     QM+++  + +    +Y+S++  CA   ++  G+ +H   ++   + + +V
Sbjct: 398 LSEEAFDFLKQMRENGMFPT--ESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYV 455

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SL++MY+   +  DA +                   F+ M  +N+VAWN ++  Y + 
Sbjct: 456 GCSLIDMYAKSGNMDDARL------------------FFNCMIVKNLVAWNEMIHGYAQN 497

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
               +AV  F  ML    +P +++F+ V    S  G
Sbjct: 498 GFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSG 533


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 217/669 (32%), Positives = 355/669 (53%), Gaps = 53/669 (7%)

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAE--MVGLKYVEVDYSKYDLVCK---VFDTMRRRN 190
           CFS P   +++ L+  +   L+       ++    +   YS+   + K   VFD MR +N
Sbjct: 70  CFSQPGYSMFSGLM-FFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKN 128

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +++WN+IV+ Y + +R  EA   F  M       +TIS+  +     + G    A  V+ 
Sbjct: 129 IISWNSIVAGYFQNKRPQEAQNMFDKM----SERNTISWNGLVSGYINNGMINEAREVFD 184

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            + +       ++   ++ +  Y + G    A  +F    E+N   W  M+GG +Q    
Sbjct: 185 RMPE------RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRI 238

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA  LF  + E D      VT  + +    Q     +G+ + A ++  F  +P      
Sbjct: 239 DEACRLFDMMPEKDV-----VTRTNMIGGYCQ-----VGRLVEARML--FDEMP------ 280

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              R+VVSW TMI+ +VQN   D    L   M ++    + V+ TA+L   +N      G
Sbjct: 281 --RRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTN-----CG 329

Query: 431 KQTHAYLLRHGIHFEGMES--YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           +   A  L + +  + + +   +I  + ++G +  ARQ+F++    ++D+ TW+AMI  Y
Sbjct: 330 RLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQ--MREKDEGTWSAMIKVY 387

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            + GL  +A   FR M    + PN  ++ SVL  C  + N++ G+++H   +R   D +V
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           +V + L+ MY K G +  A  VF +   K+ V + ++I GY QHG+   AL +F  M   
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFS 507

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           GI PD +TFV VLSACSY G V +GL+IF+ M+ +Y+++   EHY C+ D+LGR GK+ E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A + ++++  E + + IWG+LLG+CR H   +LAEV AKKLL ++ +N+ P   +LLSNI
Sbjct: 568 AMDLIEKMPMEADAI-IWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP--FILLSNI 624

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE-HPQSHKIYEMLER 787
           YA +G W++V ++R+ MR+R + K  GCSWI V   V++F   D   HP+  +I  +LE 
Sbjct: 625 YASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEW 684

Query: 788 LAMEMRNAG 796
           L+  +R AG
Sbjct: 685 LSGLLREAG 693



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G    ARQ+FD +       W+ +I  +    L  +A+ L+  M++     +  +   
Sbjct: 358 QNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI- 416

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            SVL  CA   NL  G+ +H   +R   +   +V + LL+MY  C +   A+        
Sbjct: 417 -SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAK-------- 467

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     +VFD    ++VV WN+I++ Y +    VEA+R F  M   GI P  ++FV
Sbjct: 468 ----------QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFV 517

Query: 231 NVFPALSSLGDYKSA 245
            V  A S  G+ K  
Sbjct: 518 GVLSACSYTGNVKKG 532


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 185/540 (34%), Positives = 310/540 (57%), Gaps = 31/540 (5%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F +  E +   WN+M+  +V +N P  A++ + ++LE    V D  TF S L   
Sbjct: 30  YAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           + L E  +G+ LH  ++K  +   + +   ++                     R+ V W 
Sbjct: 90  ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MIS +++N   +E L+L  +M++ GF  D VT+  L+SA + L++  VG + H+++   
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 441 GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +     + S L++MYAK G +KTARQ+F+K    D+D   W+A+I GY +N    EA  
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDK--LSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 500 AFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            FR++    N+ PN VTI +V+ AC  +G++E G+ +H +  R     +V +  SLIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           SK G I+ A  +F  +  K+ +++ +M+ G+  HG+   AL+ FR M+   ++PD ITF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFI 387

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--EL 676
            VL+ACS+AGLV EG ++F  ++  Y ++  +EHY C+ D+L R G + EA EF++   L
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
             +G    IWGS+LG+CR++ + EL E  A+ LL+++  N   G ++LLSNIYA+   W 
Sbjct: 448 QPDG---AIWGSMLGACRVYNNLELGEEAARFLLKLEPTND--GVYILLSNIYAKRKMWN 502

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V KVR+ M E+G++K  GCS + +    + F + D  HP+  +I  ML ++  +++ AG
Sbjct: 503 EVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAG 562



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 247/542 (45%), Gaps = 95/542 (17%)

Query: 66  TRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           TR   V+ WN+++  FV +N+P  A+  Y++M + S     D +T+ S+LK CA     +
Sbjct: 38  TRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCALLLEFK 96

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           +GK +H   ++   +   ++  +LLNMY+ C     A  +                  F+
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL------------------FE 138

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M  RN V W +++S Y+K     EA+  ++ M   G  P  ++   +  A + L D   
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL-- 196

Query: 245 ADVVYGLLVKLGSEYVNDL------FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
                G+ +KL S ++ ++       + S+ + MYA+ G    AR++FD   +++   W+
Sbjct: 197 -----GVGMKLHS-HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I GYV+NN   EA++LF +V     +  ++VT L+ +SA +QL +L+ G+ +H YI +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
                 V + N++I+                    +D++SWN+M++ F  +GL  E L  
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQ 370

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
              MQ      D +T   +L+A S+                                  +
Sbjct: 371 FRLMQTTDLQPDEITFIGVLTACSH----------------------------------A 396

Query: 459 GLIKTARQIFEKNDS--GDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           GL++  +++F + ++  G R ++  +  M+    + GLL EA    R M    + P+   
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM---PLQPDGAI 453

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             S+L AC    N+ELG++   F ++ L   N  V   L ++Y+K  + N    V   + 
Sbjct: 454 WGSMLGACRVYNNLELGEEAARFLLK-LEPTNDGVYILLSNIYAKRKMWNEVKKVRELMN 512

Query: 576 EK 577
           EK
Sbjct: 513 EK 514



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 204/413 (49%), Gaps = 37/413 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LF+ +     V+W ++I G++ N+ P EA+LLY +M++     S D  T ++++ AC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDG--FSPDEVTMATLVSAC 190

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE ++L +G  +H H           + ++L+NMY+ C     A                
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR--------------- 235

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML-RMGIRPSTISFVNVFPAL 236
              +VFD +  ++V AW+ ++  YVK  R  EA++ FR +     +RP+ ++ + V  A 
Sbjct: 236 ---QVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISAC 292

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LGD ++   V+  + +  ++  + + + +S I M+++ G  D A++IFD+   ++   
Sbjct: 293 AQLGDLETGRWVHDYITR--TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLIS 350

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M+ G+  +    EA+  F ++++  ++  D++TF+  L+A S    +  G++L  Y 
Sbjct: 351 WNSMVNGFALHGLGREALAQF-RLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YE 408

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
           I+   AL  + L +        +  M+    + GL  E    +  M  Q    D     +
Sbjct: 409 IE---ALYGVRLKS------EHYGCMVDLLCRAGLLAEAREFIRVMPLQP---DGAIWGS 456

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           +L A     N ++G++   +LL+     +G+   L ++YAK  +    +++ E
Sbjct: 457 MLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRE 509


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 217/669 (32%), Positives = 355/669 (53%), Gaps = 53/669 (7%)

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAE--MVGLKYVEVDYSKYDLVCK---VFDTMRRRN 190
           CFS P   +++ L+  +   L+       ++    +   YS+   + K   VFD MR +N
Sbjct: 70  CFSQPGYSMFSGLM-FFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKN 128

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +++WN+IV+ Y + +R  EA   F  M       +TIS+  +     + G    A  V+ 
Sbjct: 129 IISWNSIVAGYFQNKRPQEAQNMFDKM----SERNTISWNGLVSGYINNGMINEAREVFD 184

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            + +       ++   ++ +  Y + G    A  +F    E+N   W  M+GG +Q    
Sbjct: 185 RMPE------RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRI 238

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA  LF  + E D      VT  + +    Q     +G+ + A ++  F  +P      
Sbjct: 239 DEACRLFDMMPEKDV-----VTRTNMIGGYCQ-----VGRLVEARML--FDEMP------ 280

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              R+VVSW TMI+ +VQN   D    L   M ++    + V+ TA+L   +N      G
Sbjct: 281 --RRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTN-----CG 329

Query: 431 KQTHAYLLRHGIHFEGMES--YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           +   A  L + +  + + +   +I  + ++G +  ARQ+F++    ++D+ TW+AMI  Y
Sbjct: 330 RLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQ--MREKDEGTWSAMIKVY 387

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            + GL  +A   FR M    + PN  ++ SVL  C  + N++ G+++H   +R   D +V
Sbjct: 388 ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDV 447

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           +V + L+ MY K G +  A  VF +   K+ V + ++I GY QHG+   AL +F  M   
Sbjct: 448 YVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFS 507

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           GI PD +TFV VLSACSY G V +GL+IF+ M+ +Y+++   EHY C+ D+LGR GK+ E
Sbjct: 508 GIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNE 567

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A + ++++  E + + IWG+LLG+CR H   +LAEV AKKLL ++ +N+ P   +LLSNI
Sbjct: 568 AMDLIEKMPMEADAI-IWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGP--FILLSNI 624

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE-HPQSHKIYEMLER 787
           YA +G W++V ++R+ MR+R + K  GCSWI V   V++F   D   HP+  +I  +LE 
Sbjct: 625 YASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEW 684

Query: 788 LAMEMRNAG 796
           L+  +R AG
Sbjct: 685 LSGLLREAG 693



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G    ARQ+FD +       W+ +I  +    L  +A+ L+  M++     +  +   
Sbjct: 358 QNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLI- 416

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            SVL  CA   NL  G+ +H   +R   +   +V + LL+MY  C +   A+        
Sbjct: 417 -SVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAK-------- 467

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     +VFD    ++VV WN+I++ Y +    VEA+R F  M   GI P  ++FV
Sbjct: 468 ----------QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFV 517

Query: 231 NVFPALSSLGDYKSA 245
            V  A S  G+ K  
Sbjct: 518 GVLSACSYTGNVKKG 532


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 241/784 (30%), Positives = 366/784 (46%), Gaps = 159/784 (20%)

Query: 100 SPYTSCDNY--TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           +P T    Y  T  S+LK       +R G A+H H  +   +  +++   LL MY     
Sbjct: 12  NPATHFKTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRK 71

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
           S +A+ +       D+  +DLV               N ++S  V+     EA + F  M
Sbjct: 72  SAEADQIS-----KDFDGFDLVVH-------------NCMISANVQRGNLDEARKLFDEM 113

Query: 218 LRMGIRPST--ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
                 P T  IS+  +       G  + +                              
Sbjct: 114 ------PQTNEISWTALISGFMKYGRVRES------------------------------ 137

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
              + F R  F N +      W   I GYVQN   VEA++LF+++LE  E+  + VTF S
Sbjct: 138 --MWYFERNPFQNVVS-----WTAAISGYVQNGFSVEAMKLFIKLLE-SEVKPNKVTFTS 189

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            + A + L +  LG  +   I+K      + V N++I                    E+D
Sbjct: 190 VVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKD 249

Query: 376 VVSW-------------------------------NTMISAFVQNGLDDEGLMLVYEMQK 404
           VVSW                               + MI+ + Q+G  +E L L   M +
Sbjct: 250 VVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQ 309

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLI 461
           +GF  +    +++LSA +++     G   H ++ + G  FE    + S LIDMY K G  
Sbjct: 310 EGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIG--FEKDVFVSSSLIDMYCKCGET 367

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA------------------------ 497
           K  R +F+     +++  +WNAM+ GY+ NG +EEA                        
Sbjct: 368 KDGRFLFDT--ILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLD 425

Query: 498 -------FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
                  F  F +M+     PN  T +S+L AC    +++ GK LHG  ++  +  + +V
Sbjct: 426 CEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYV 485

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCG 609
           GT+L DMY+KSG I  +  VF ++P+KN V++T MI G  + G++E +L+LF  M K   
Sbjct: 486 GTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSS 545

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           I P+ + F+AVL ACS++GLVD+GL  F+ M+  Y ++P   H+ CV DML R G++ EA
Sbjct: 546 IAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEA 605

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            EF+  +  +      W +LL  C+ + + ELAE VA KL EM  +N   GY VLLSNIY
Sbjct: 606 EEFIYSMPFQPET-NAWAALLSGCKTYKNEELAERVAGKLWEMAEKNC-AGY-VLLSNIY 662

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A  G W +V KVRK M+ +GL+K  GCSW+++   V+ F S+D  H QS +IYE+LE L 
Sbjct: 663 ASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLG 722

Query: 790 MEMR 793
            EM+
Sbjct: 723 YEMK 726



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 143/567 (25%), Positives = 245/567 (43%), Gaps = 88/567 (15%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L +   L   +P+    +  + +S   + GR   +   F+       V W   I G+V N
Sbjct: 103 LDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGYVQN 162

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
               EA+ L+ ++ +S      +  T++SV++ACA   +  +G +V    ++        
Sbjct: 163 GFSVEAMKLFIKLLESE--VKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLA 220

Query: 144 VYNSLLNMYSTCLSSLD---AEMVGLKYVEVDYSKYDLVC-------------KVFDTMR 187
           V NSL+ +   CL   +   A  V  +  E D   +  +              ++FD M 
Sbjct: 221 VSNSLITL---CLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMP 277

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           +RN V+W+ +++ Y ++    E++R F  M++ G +P+   F ++  AL+S+   ++   
Sbjct: 278 QRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMN 337

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++G + K+G E   D+FV+SS I MY + G     R +FD  LE+N   WN M+GGY  N
Sbjct: 338 IHGHVTKIGFE--KDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLN 395

Query: 308 NHPVEAIELF------------------VQVLELDEI--VFDDV----------TFLSAL 337
            H  EA  LF                  +   + DE+  VF+++          TF S L
Sbjct: 396 GHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLL 455

Query: 338 SAVSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVV 377
            A +    LD G+ LH  I+K       +V   +               V N + +++ V
Sbjct: 456 CACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEV 515

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVG-----K 431
           SW  MI    ++GL +E L L  EM+K   +  + V   A+L A S+    D G      
Sbjct: 516 SWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNS 575

Query: 432 QTHAYLLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG--- 487
               Y L+  G HF    + ++DM +++G +  A + F  +     +   W A+++G   
Sbjct: 576 MEAVYGLKPKGRHF----TCVVDMLSRAGRLFEAEE-FIYSMPFQPETNAWAALLSGCKT 630

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y    L E       +M E N    V+
Sbjct: 631 YKNEELAERVAGKLWEMAEKNCAGYVL 657


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 360/723 (49%), Gaps = 93/723 (12%)

Query: 105 CDNYTYSSVLKACAETRN-LRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTC------- 155
           C++Y       A A  R+  R+  AVHC  +R   +P   +V N LL  Y+         
Sbjct: 6   CNHYAALLSSSAAAGGRDGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLAR 65

Query: 156 ----------LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
                     L + +A +  L +  +     D   ++F +M +R+ V++N +++ +    
Sbjct: 66  RLFDAMPDPNLFTRNALLSALAHARL-LPDMD---RLFASMPQRDAVSYNALIAGFSGAG 121

Query: 206 RYVEAVRQFRMMLR-------MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
               A   +R +LR         +RPS I+   +  A S+LGD      V+  +++LG  
Sbjct: 122 APARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLG-- 179

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +    F  S  + MYA++G    A+++FD  + +N  ++NTMI G            L  
Sbjct: 180 FGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGL-----------LRC 228

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS 378
           +++E    VF+                                        A+++RD ++
Sbjct: 229 KMVEEARGVFE----------------------------------------AMVDRDSIT 248

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W TM++   QNGL  E L +   M+ +G  ID  T  ++L+A   L   + GKQ HAY +
Sbjct: 249 WTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTI 308

Query: 439 R---HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           R    G  F G  S L+DMY+K   I+ A  +F +     ++  +W AMI GY QNG  E
Sbjct: 309 RTLYDGNIFVG--SALVDMYSKCRSIRLAEAVFRRMTC--KNIISWTAMIVGYGQNGCGE 364

Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           EA   F +M    + PN  T+ SV+ +C  + ++E G Q H  ++   L   + V ++L+
Sbjct: 365 EAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALV 424

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            +Y K G I  A  +F ++P  + V+YT ++ GY Q G ++  + LF  M   G++P+ +
Sbjct: 425 TLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGV 484

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+ VLSACS +GLV++G   F  MQQ++ I    +HY C+ D+  R G++ EA EF+++
Sbjct: 485 TFIGVLSACSRSGLVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQ 544

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +    + +  W +LL +CRL G  E+ +  A+ LL+ D +N  P  +VLL +++A +G W
Sbjct: 545 MPRCPDAIG-WATLLSACRLRGDMEIGKWAAENLLKTDPQN--PASYVLLCSMHASKGEW 601

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
             V  +R+ MR+R ++KE GCSWI     V+ F++ DQ HP S  IYE L+ L  +M   
Sbjct: 602 SEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEE 661

Query: 796 GNK 798
           G K
Sbjct: 662 GYK 664



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 179/410 (43%), Gaps = 52/410 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F+++    ++ W T++ G   N L  EA+ ++ +M+        D YT+ S+L AC
Sbjct: 234 ARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEG--VGIDQYTFGSILTAC 291

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                   GK +H + IR   + + FV ++L++MYS C S   AE               
Sbjct: 292 GALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAE--------------- 336

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  +N+++W  ++  Y +     EAVR F  M   GI+P+  +  +V  + +
Sbjct: 337 ---AVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCA 393

Query: 238 SLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +L   +     + + +  G   Y+    V+S+ + +Y + G  + A ++FD     +   
Sbjct: 394 NLASLEEGAQFHCMALVSGLRPYIT---VSSALVTLYGKCGSIEDAHRLFDEMPFHDQVS 450

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG------- 349
           +  ++ GY Q     E I+LF ++L L  +  + VTF+  LSA S+   ++ G       
Sbjct: 451 YTALVSGYAQFGKAKETIDLFEKML-LKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSM 509

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           QQ H           +++L+         +  MI  + ++G   E    + +M +     
Sbjct: 510 QQDHG----------IVLLDD-------HYTCMIDLYSRSGRLKEAEEFIRQMPR---CP 549

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           D++    LLSA     + ++GK     LL+           L  M+A  G
Sbjct: 550 DAIGWATLLSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKG 599



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 20/184 (10%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA  +F  +T    + W  +I+G+  N    EA+ ++S+M+        +++T  SV+ +
Sbjct: 334 LAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG--IKPNDFTLGSVISS 391

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA   +L  G   HC  +     P   V ++L+ +Y  C S  DA               
Sbjct: 392 CANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAH-------------- 437

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++FD M   + V++  +VS Y +  +  E +  F  ML  G++P+ ++F+ V  A 
Sbjct: 438 ----RLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSAC 493

Query: 237 SSLG 240
           S  G
Sbjct: 494 SRSG 497


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 329/601 (54%), Gaps = 31/601 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD +   +   W  ++  Y   +  VE V+ + ++++ G R   I F     A + L D
Sbjct: 98  VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
             +   ++  LVK+ S    D  V +  + MYA+ G    A K+F++   RN   W +MI
Sbjct: 158 LDNGKKIHCQLVKVPS---FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GYV+N+   E + LF ++ E + ++ ++ T+ + + A ++L  L  G+  H  ++K+ +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273

Query: 362 ALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYE 401
            L   ++ ++++                     D+V W  MI  +  NG  +E L L  +
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLI 461
           M+      + VT+ ++LS    + N ++G+  H   ++ GI    + + L+ MYAK    
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQN 393

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           + A+ +FE     ++D   WN++I+G++QNG + EA   F +M   +VTPN VT+AS+  
Sbjct: 394 RDAKYVFEMES--EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451

Query: 522 ACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           AC  +G++ +G  LH +S++  +L   +V VGT+L+D Y+K G    A  +F  I EKN+
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           +T++ MI GYG+ G +  +L LF  M     +P+  TF ++LSAC + G+V+EG + F  
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M ++Y   PST+HY C+ DML R G++ +A + ++++  + +V   +G+ L  C +H   
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV-RCFGAFLHGCGMHSRF 630

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L E+V KK+L++   ++   Y+VL+SN+YA +G W    +VR  M++RGL K  G S +
Sbjct: 631 DLGEIVIKKMLDLHPDDA--SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688

Query: 760 D 760
           +
Sbjct: 689 E 689



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 178/621 (28%), Positives = 288/621 (46%), Gaps = 75/621 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ-MKKSSPYTSCDNYTYSSVLKA 116
           AR +FD I  P   +W  ++  +  N    E + LY   MK    Y   D+  +S  LKA
Sbjct: 95  ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY---DDIVFSKALKA 151

Query: 117 CAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           C E ++L  GK +HC  ++   F N    V   LL+MY+ C     A             
Sbjct: 152 CTELQDLDNGKKIHCQLVKVPSFDN---VVLTGLLDMYAKCGEIKSAH------------ 196

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVF+ +  RNVV W ++++ YVK +   E +  F  M    +  +  ++  +  
Sbjct: 197 ------KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L         +G LVK G E  + L   +S + MY + G    AR++F+     + 
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCL--VTSLLDMYVKCGDISNARRVFNEHSHVDL 308

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +W  MI GY  N    EA+ LF Q ++  EI  + VT  S LS    ++ L+LG+ +H 
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLF-QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
             IK  +     V NA++                    E+D+V+WN++IS F QNG   E
Sbjct: 368 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG------IHFEGME 448
            L L + M  +    + VTV +L SA ++L +  VG   HAY ++ G      +H   + 
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH---VG 483

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+D YAK G  ++AR IF+  +  +++  TW+AMI GY + G    +   F +ML+  
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIE--EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ 541

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----LIDMYSKSGVI 564
             PN  T  S+L AC   G +  GK+   FS  Y  D N    T     ++DM +++G +
Sbjct: 542 QKPNESTFTSILSACGHTGMVNEGKKY--FSSMY-KDYNFTPSTKHYTCMVDMLARAGEL 598

Query: 565 NYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
             A ++  K+P +  V  +   + G G H   +    + + M    + PD  ++  ++S 
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM--LDLHPDDASYYVLVSN 656

Query: 624 CSYA--GLVDEGLQIFDLMQQ 642
             YA  G  ++  ++ +LM+Q
Sbjct: 657 L-YASDGRWNQAKEVRNLMKQ 676



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 245/502 (48%), Gaps = 35/502 (6%)

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F  LS   +  S    +G+L   G+  + D+ +A+  + +Y   G    AR +FD   E 
Sbjct: 48  FLLLSKCTNIDSLRQSHGVLT--GNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W  M+  Y  N   VE ++L+  +L      +DD+ F  AL A ++LQ+LD G+++
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164

Query: 353 HAYIIK-----NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           H  ++K     N V   ++              V N +  R+VV W +MI+ +V+N L +
Sbjct: 165 HCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           EGL+L   M++   + +  T   L+ A + L     GK  H  L++ GI     + + L+
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G I  AR++F  N+    D   W AMI GYT NG + EA   F++M    + PN
Sbjct: 285 DMYVKCGDISNARRVF--NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VTIASVL  C  + N+ELG+ +HG SI+  + D N  V  +L+ MY+K      A  VF
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVF 400

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
               EK+ V + ++I G+ Q+G    AL LF  M    + P+ +T  ++ SAC+  G + 
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460

Query: 632 EGLQIFDLMQQEYKIQPSTEHY-CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            G  +     +   +  S+ H    + D   + G    A   + +  EE N +  W +++
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTI-TWSAMI 518

Query: 691 GSCRLHGHS----ELAEVVAKK 708
           G     G +    EL E + KK
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKK 540



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 226/505 (44%), Gaps = 49/505 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           +IH     +P      +   L    + G    A ++F+ IT    V W ++I G+V N+L
Sbjct: 163 KIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             E ++L+++M++++     + YTY +++ AC +   L  GK  H   ++     S  + 
Sbjct: 223 CEEGLVLFNRMRENNVLG--NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
            SLL+MY  C    +A                   +VF+     ++V W  ++  Y    
Sbjct: 281 TSLLDMYVKCGDISNAR------------------RVFNEHSHVDLVMWTAMIVGYTHNG 322

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
              EA+  F+ M  + I+P+ ++  +V      + + +    V+GL +K+G   + D  V
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG---IWDTNV 379

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           A++ + MYA+      A+ +F+   E++   WN++I G+ QN    EA+ LF   +  + 
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF-HRMNSES 438

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI------------------ 366
           +  + VT  S  SA + L  L +G  LHAY +K  F+A   +                  
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              + + + E++ ++W+ MI  + + G     L L  EM K+    +  T T++LSA  +
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGH 558

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
               + GK+  + + +        + Y  ++DM A++G ++ A  I EK      D   +
Sbjct: 559 TGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI-QPDVRCF 617

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLE 506
            A + G   +   +   +  ++ML+
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLD 642


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/592 (32%), Positives = 320/592 (54%), Gaps = 55/592 (9%)

Query: 232 VFPAL-SSLGDYKSADV---VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           + P+L  +     S D+   ++G   K G  + +D+FV ++ + MY + GC   AR +FD
Sbjct: 90  ILPSLLKACAQASSGDLGRELHGFAQKNG--FASDVFVCNALMNMYEKCGCLVSARLVFD 147

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ER+   W TM+G YV++    EA+ L V+ ++   +    V  +S ++    L ++ 
Sbjct: 148 QMPERDVVSWTTMLGCYVRSKAFGEALRL-VREMQFVGVKLSGVALISLIAVFGNLLDMK 206

Query: 348 LGQQLHAYIIKNF--VALPVIVLNAVIE--------------------RDVVSWNTMISA 385
            G+ +H YI++N     + V +  A+I+                    R VVSW  MI+ 
Sbjct: 207 SGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAG 266

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
            +++   DEG      M ++    + +T+ +L++    +   D+GK  HAYLLR+G    
Sbjct: 267 CIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMS 326

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + LIDMY K G +  AR +F  N    +D   W+ +I+ Y     +++ F  F +M
Sbjct: 327 LALVTALIDMYGKCGQVGYARALF--NGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEM 384

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L ++V PN VT+ S+L  C   G ++LGK  H +  R+ L+ +V + T+LI+MY+K G +
Sbjct: 385 LNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDV 444

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A ++F +  +++   + TM+ G+  HG  + AL LF  M+  G+EP+ ITFV++  AC
Sbjct: 445 TIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHAC 504

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S++GL+                    EHY C+ D+LGR G + EA+  ++ +    N + 
Sbjct: 505 SHSGLM--------------------EHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTI- 543

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IWG+LL +C+LH +  L EV A+K+LE+D +N   GY VL SNIYA    W +V  VR+ 
Sbjct: 544 IWGALLAACKLHKNLALGEVAARKILELDPQNC--GYSVLKSNIYASAKRWNDVTSVREA 601

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M   G++KE G SWI+V G V+ F S D+   Q+ K+YEM+  + +++R +G
Sbjct: 602 MSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESG 653



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 273/542 (50%), Gaps = 63/542 (11%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           +N +I  +  N+LP  +   Y  M+ S+   + DN+   S+LKACA+  +  +G+ +H  
Sbjct: 55  YNLLISSYTNNHLPQASFNCYLHMR-SNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
             +       FV N+L+NMY  C   + A +V                  FD M  R+VV
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLV------------------FDQMPERDVV 155

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
           +W T++  YV+++ + EA+R  R M  +G++ S ++ +++     +L D KS   V+G +
Sbjct: 156 SWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYI 215

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           V+   +   ++ + ++ I MY + GC   A+++FD   +R+   W  MI G +++    E
Sbjct: 216 VRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDE 275

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
             + F ++LE +++  +++T LS ++    +  LDLG+  HAY+++N   + + ++ A+I
Sbjct: 276 GAKNFNRMLE-EKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALI 334

Query: 373 E--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
           +                    +DV  W+ +ISA+      D+   L  EM       ++V
Sbjct: 335 DMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNV 394

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKN 471
           T+ +LLS  +     D+GK THAY+ RHG+  +  +E+ LI+MYAK G +  AR +F  N
Sbjct: 395 TMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLF--N 452

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
           ++  RD   WN M+AG++ +G  +EA   F +M  H V PN +T  S+  AC+  G +E 
Sbjct: 453 EAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME- 511

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYG 590
                     Y           L+D+  ++G ++ A N+   +P + N++ +  ++    
Sbjct: 512 ---------HY---------GCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACK 553

Query: 591 QH 592
            H
Sbjct: 554 LH 555



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 211/473 (44%), Gaps = 68/473 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +     V W T++  +V +    EA+ L  +M+      S       S++   
Sbjct: 142 ARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLS--GVALISLIAVF 199

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFV--YNSLLNMYST--CLSSLDAEMVGLKYVEVDY 173
               +++ G+AVH + +R   +    V    +L++MY    CL+S               
Sbjct: 200 GNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQ------------- 246

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  ++FD + +R+VV+W  +++  +++ R  E  + F  ML   + P+ I+ +++ 
Sbjct: 247 -------RLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLI 299

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
                +G        +  L++ G  +   L + ++ I MY + G   +AR +F+   +++
Sbjct: 300 TECGFVGTLDLGKWFHAYLLRNG--FGMSLALVTALIDMYGKCGQVGYARALFNGVKKKD 357

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
            ++W+ +I  Y   +   +   LFV++L  +++  ++VT +S LS  ++   LDLG+  H
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLN-NDVKPNNVTMVSLLSLCAEAGALDLGKWTH 416

Query: 354 AYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           AYI ++ + + VI                    + N  ++RD+  WNTM++ F  +G   
Sbjct: 417 AYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGK 476

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           E L L  EM+  G   + +T  ++  A S           H+ L+ H          L+D
Sbjct: 477 EALELFSEMESHGVEPNDITFVSIFHACS-----------HSGLMEH-------YGCLVD 518

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +  ++G +  A  I E N     +   W A++A    +  L    VA R++LE
Sbjct: 519 LLGRAGHLDEAHNIIE-NMPMRPNTIIWGALLAACKLHKNLALGEVAARKILE 570



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 143/307 (46%), Gaps = 23/307 (7%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           K++     + +   C+ G    A++LFD +++ + V W  +I G + +    E    +++
Sbjct: 223 KMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNR 282

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M +   +   +  T  S++  C     L +GK  H + +R     S  +  +L++MY  C
Sbjct: 283 MLEEKLFP--NEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKC 340

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                         +V Y++      +F+ +++++V  W+ ++S Y       +    F 
Sbjct: 341 -------------GQVGYAR-----ALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFV 382

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            ML   ++P+ ++ V++    +  G        +  + + G E   D+ + ++ I MYA+
Sbjct: 383 EMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEV--DVILETALINMYAK 440

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    AR +F+  ++R+  +WNTM+ G+  +    EA+ELF + +E   +  +D+TF+S
Sbjct: 441 CGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSE-MESHGVEPNDITFVS 499

Query: 336 ALSAVSQ 342
              A S 
Sbjct: 500 IFHACSH 506



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 16/224 (7%)

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLH 536
           +A +N +I+ YT N L + +F  +  M  ++    +   + S+L AC    + +LG++LH
Sbjct: 52  EANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELH 111

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           GF+ +     +VFV  +L++MY K G +  A  VF ++PE++ V++TTM+  Y +     
Sbjct: 112 GFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFG 171

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD-------EGLQIFDLMQQEYKIQPS 649
            AL L R M+  G++   +  +++++   +  L+D        G  + ++  ++ ++  +
Sbjct: 172 EALRLVREMQFVGVKLSGVALISLIAV--FGNLLDMKSGRAVHGYIVRNVGDEKMEVSMT 229

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           T     + DM  + G +  A      L +   V   W  ++  C
Sbjct: 230 TA----LIDMYCKGGCLASAQRLFDRLSKRSVV--SWTVMIAGC 267


>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 599

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/556 (33%), Positives = 311/556 (55%), Gaps = 29/556 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +  I  +    C D+A ++F+   E +  ++N MI  Y  +  P  AI ++ ++   
Sbjct: 39  FIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRAC 98

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------NFVALPVIVLN 369
             I+ D  T+     A +    ++ G+++H  I++              NF  +   + N
Sbjct: 99  QNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGN 158

Query: 370 A------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAAS 422
           A         +DVV WN +I+ + + G+  +   +  EM + +    +  T+  L+ A  
Sbjct: 159 AQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACI 218

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
             +N  +G+  H Y+++  +  EG  +E+ LI++Y K G +  AR++F+  +  +++   
Sbjct: 219 ESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFD--EIPEKNTVV 276

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN++I GY Q G L E     R+M   N+ P+  T++ VL AC  MG   LG  +H F+ 
Sbjct: 277 WNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAE 336

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           +  +  +VF+GT+LIDMY+K G I  A  VF ++ E+N  T+  ++ GY  HG +E A+ 
Sbjct: 337 KKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIE 395

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M+  G  PD+ITF+AVL AC+++GLV+ G Q FDLM Q YKI P  EHY C+ D+L
Sbjct: 396 LFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLL 455

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G + EA E +K +  E NV+ +WG+LL +C +HG+ E+ E  A  +++++  +   G
Sbjct: 456 GRAGLLQEARELIKMMVVEPNVV-VWGALLSACSIHGNIEIGEWAAHHMIKLNAMDG--G 512

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            +V+L+N+YA    +  V  VR+ M E+G+ K  GCS I++G  V+ F   D+ HP+S +
Sbjct: 513 SYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEE 572

Query: 781 IYEMLERLAMEMRNAG 796
           IY +L+ L+ +++ AG
Sbjct: 573 IYSVLDELSKKLKMAG 588



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 250/547 (45%), Gaps = 77/547 (14%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T  SVL       N++  K +H   I    + ++F+   ++N +             L +
Sbjct: 5   TPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSF-------------LSH 51

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTI 227
             +DY+      +VF+  +  +   +N ++  Y  ++    A+  + +M     I     
Sbjct: 52  ACLDYAT-----QVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKY 106

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  VF A +S    +    V+G++V++G E   D F+ SS +  Y   G    A+++FD
Sbjct: 107 TYPFVFKACASQFAVEKGKEVHGVIVRIGYEL--DGFLQSSLLNFYMVCGEIGNAQQVFD 164

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               ++   WN +I GY +    +++  +F +++E+ E+  ++ T +  + A  + + L 
Sbjct: 165 EFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLK 224

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAF 386
           LG+ +H Y++K+ V    + L A +                     E++ V WN++I  +
Sbjct: 225 LGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGY 284

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q G  +E + L+ EM       D  TV+ +LSA + +   ++G   H +  + GI    
Sbjct: 285 CQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVF 344

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + LIDMYAK G I  AR++F++ +  +R+ ATWNA+++GY  +G  E A   F +M E
Sbjct: 345 IGTALIDMYAKCGFIGAARKVFDQMN--ERNVATWNAILSGYASHGQAESAIELFSEMRE 402

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
               P+ +T  +VL AC   G +E GKQ     ++Y                        
Sbjct: 403 SGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYY----------------------- 439

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
                 KIP +    Y  M+   G+ G+ + A  L + M    +EP+ + + A+LSACS 
Sbjct: 440 ------KIPPRVE-HYGCMVDLLGRAGLLQEARELIKMMV---VEPNVVVWGALLSACSI 489

Query: 627 AGLVDEG 633
            G ++ G
Sbjct: 490 HGNIEIG 496



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 260/589 (44%), Gaps = 101/589 (17%)

Query: 23  QLPQIHSLSPPIPKLK------TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTI 76
           QL QIH+ S  I  L       T  I S LS  C +     A Q+F+    P   I+N +
Sbjct: 21  QLKQIHAKSI-ISSLSYTQFIITKIINSFLSHACLD----YATQVFNQTQEPDGFIYNAM 75

Query: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           I  +  +  P  AI +Y++M+        D YTY  V KACA    +  GK VH   +R 
Sbjct: 76  IRAYSSSQTPCVAISIYNKMRACQNILG-DKYTYPFVFKACASQFAVEKGKEVHGVIVRI 134

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
                 F+ +SLLN Y  C    +A+                  +VFD    ++VV WN 
Sbjct: 135 GYELDGFLQSSLLNFYMVCGEIGNAQ------------------QVFDEFDAKDVVFWNA 176

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVK- 254
           +++ Y +    +++   F+ M+ +  +RP+  + + +  A     + K    ++G ++K 
Sbjct: 177 LITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKD 236

Query: 255 -LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
            +  E V    + ++ I +Y + G  D ARK+FD   E+NT VWN++I GY Q     E 
Sbjct: 237 MVLREGVK---LEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEV 293

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------- 358
           IEL  + + L  +  D  T    LSA +Q+   +LG  +H +  K               
Sbjct: 294 IELLRE-MHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGTALIDM 352

Query: 359 ----NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                F+     V + + ER+V +WN ++S +  +G  +  + L  EM++ G   DS+T 
Sbjct: 353 YAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITF 412

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKND 472
            A+L A ++    + GKQ    +L++      +E Y  ++D+  ++GL++ AR++     
Sbjct: 413 LAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEAREL----- 467

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
                                        + M+   V PNVV   ++L AC+  GNIE+G
Sbjct: 468 ----------------------------IKMMV---VEPNVVVWGALLSACSIHGNIEIG 496

Query: 533 KQLHGFSIRYLLDQNVFVGTS---LIDMYSKSGVINYAANVFAKIPEKN 578
           +    ++  +++  N   G S   L ++Y+ +   N    V   + EK 
Sbjct: 497 E----WAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKG 541



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 1/126 (0%)

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            + T  SVL       NI+  KQ+H  SI   L    F+ T +I+ +     ++YA  VF
Sbjct: 2   TIQTPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVF 61

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC-GIEPDAITFVAVLSACSYAGLV 630
            +  E +   Y  MI  Y        A+S++  M+ C  I  D  T+  V  AC+    V
Sbjct: 62  NQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAV 121

Query: 631 DEGLQI 636
           ++G ++
Sbjct: 122 EKGKEV 127


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/758 (27%), Positives = 381/758 (50%), Gaps = 53/758 (6%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  I  P  V W ++++G+  N    E + +Y ++++   Y  C+    ++V+++C   
Sbjct: 116 VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVY--CNENAMATVIRSCGVL 173

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            +  +G  V    I+   + +  V NSL++M+  C S  +A  V                
Sbjct: 174 VDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCV---------------- 217

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
             FD M+ R+ ++WN+I++  V      +++  F  M     +   I+   + P   S  
Sbjct: 218 --FDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQ 275

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +    ++G++VK G E  +++ V +S + MY++ G  + A  +F    ER+   WN+M
Sbjct: 276 NLRWGRGLHGMVVKSGLE--SNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSM 333

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +  +V N +   A+EL +++L+  +   + VTF +ALSA   L+ L +   +HA++I   
Sbjct: 334 MASHVDNGNYPRALELLIEMLQTRKAT-NYVTFTTALSACYNLETLKI---VHAFVILLG 389

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   +I+ NA++                    +RD V+WN +I     N   +  +    
Sbjct: 390 LHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFN 449

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFEG-MESYLIDMYAKS 458
            ++++G  ++ +T+  LLSA  +  +  D G   HA+++  G   E  ++S LI MYA+ 
Sbjct: 450 LLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQC 509

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G + T+  IF+     +++ +TWNA+++     G  EEA     +M    +  +  + + 
Sbjct: 510 GDLNTSNYIFDV--LANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSV 567

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
                  +  ++ G+QLH   I++  + N +V  + +DMY K G I+    +  +   ++
Sbjct: 568 AHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRS 627

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
             ++  +I    +HG  ++A   F  M   G+ PD +TFV++LSACS+ GLVDEGL  F 
Sbjct: 628 QRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFS 687

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
            M  ++ +    EH  C+ D+LGR GK+ EA  F+ ++      L +W SLL +C++HG+
Sbjct: 688 SMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDL-VWRSLLAACKIHGN 746

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            ELA   A +L E+D+ +     +VL SN+ A    W +V+ VRK+M    ++K+  CSW
Sbjct: 747 LELARKAADRLFELDSSDDSA--YVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACSW 804

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + +   V  F   DQ HPQ+ +IY  LE L   +R AG
Sbjct: 805 VKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAG 842



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 309/693 (44%), Gaps = 56/693 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +FD +       WN ++ GFV      +A+  +  M +     S  +Y  +S++ AC
Sbjct: 11  AQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPS--SYVAASLVTAC 68

Query: 118 AETRNLRIGK-AVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV-EVDYSK 175
             +  +  G   VH H I+C      FV  SLL+ Y T             +V EVD   
Sbjct: 69  DRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGT-----------FGWVAEVDM-- 115

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 VF  +   N+V+W +++  Y       E +  +R + R G+  +  +   V  +
Sbjct: 116 ------VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRS 169

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
              L D      V G ++K G +    + VA+S I M+      + A  +FD+  ER+T 
Sbjct: 170 CGVLVDKMLGYQVLGSVIKSGLD--TTVSVANSLISMFGNCDSIEEASCVFDDMKERDTI 227

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN++I   V N H  +++E F Q +       D +T  + L      Q L  G+ LH  
Sbjct: 228 SWNSIITASVHNGHCEKSLEYFSQ-MRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGM 286

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
           ++K+ +   V V N+++                    ERD++SWN+M+++ V NG     
Sbjct: 287 VVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRA 346

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           L L+ EM +     + VT T  LSA  NL   +  K  HA+++  G+H    + + L+ M
Sbjct: 347 LELLIEMLQTRKATNYVTFTTALSACYNL---ETLKIVHAFVILLGLHHNLIIGNALVTM 403

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y K G +  A+++ +     DRD+ TWNA+I G+  N     A  AF  + E  V  N +
Sbjct: 404 YGKFGSMAAAQRVCKIMP--DRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYI 461

Query: 515 TIASVLPA-CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           TI ++L A  +P   ++ G  +H   +    +   FV +SLI MY++ G +N +  +F  
Sbjct: 462 TIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDV 521

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  KNS T+  ++     +G  E AL L   M+  GI  D  +F    +      L+DEG
Sbjct: 522 LANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEG 581

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            Q+  L+ + +  + +        DM G+ G++ + +  + +          W  L+ + 
Sbjct: 582 QQLHSLIIK-HGFESNDYVLNATMDMYGKCGEIDDVFRILPQ--PRSRSQRSWNILISAL 638

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
             HG  + A     ++L++  R     +  LLS
Sbjct: 639 ARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 211/458 (46%), Gaps = 44/458 (9%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY++ G  + A+ +FD   ERN   WN ++ G+V+     +A++ F  +LE   +     
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLE-HGVRPSSY 59

Query: 332 TFLSALSAVSQLQELDLGQ-QLHAYIIKNFVALPVIVLNAVI------------------ 372
              S ++A  +   +  G  Q+HA++IK  +A  V V  +++                  
Sbjct: 60  VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119

Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
             E ++VSW +++  +  NG   E + +   +++ G   +   +  ++ +   L ++ +G
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            Q    +++ G+     + + LI M+     I+ A  +F+  D  +RD  +WN++I    
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFD--DMKERDTISWNSIITASV 237

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
            NG  E++   F QM   +   + +TI+++LP C    N+  G+ LHG  ++  L+ NV 
Sbjct: 238 HNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVC 297

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V  SL+ MYS++G    A  VF K+ E++ +++ +M+  +  +G   RAL L   M    
Sbjct: 298 VCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTR 357

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD----MLGRVGK 665
              + +TF   LSAC       E L+I       + I     H   + +    M G+ G 
Sbjct: 358 KATNYVTFTTALSACYNL----ETLKIV----HAFVILLGLHHNLIIGNALVTMYGKFGS 409

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           +  A    K + +   V   W +L+G     GH++  E
Sbjct: 410 MAAAQRVCKIMPDRDEV--TWNALIG-----GHADNKE 440



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 36  KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           +L+T    S ++   Q G  + +  +FD +    +  WN I+          EA+ L  +
Sbjct: 493 ELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIK 552

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M+    +   D +++S           L  G+ +H   I+     + +V N+ ++MY  C
Sbjct: 553 MRNDGIHL--DQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKC 610

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                              + D V ++    R R+  +WN ++S   +   + +A   F 
Sbjct: 611 ------------------GEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFH 652

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            ML +G+RP  ++FV++  A S  G
Sbjct: 653 EMLDLGLRPDHVTFVSLLSACSHGG 677


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 234/813 (28%), Positives = 388/813 (47%), Gaps = 103/813 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAI------LLYSQMKKSSPYTSCDNYTYS 111
           AR+L D I   T   +  +I  + C +  ++ +      ++Y  M         D Y   
Sbjct: 136 ARKLLDEIPNRTVPAYAALIRSY-CRSEQWDELFSXFRLMVYEGMLP-------DKYLVP 187

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------------- 155
           ++LKAC+     RIGK VH   IR       FV N+L++ YS C                
Sbjct: 188 TILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQER 247

Query: 156 -----------------------------LSSLDAEMVGLKYVEVDYSK---YDLVCKVF 183
                                        L  +  +++    +   +++    DL  +  
Sbjct: 248 DVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETL 307

Query: 184 DTMRRR----NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
           + M  R     V +WN I+S  V+     +A+  F  ML     P+ I+  ++ PA + L
Sbjct: 308 EEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGL 367

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
              +    ++ +  K G   V +++V  S I MY++ G +D+A K+F     +NT +WN 
Sbjct: 368 KALRLGKAIHXIAXKHG--IVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNE 425

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MI  YV      +A+ L ++ ++ D    D +T+ + LS  ++        +L + +++ 
Sbjct: 426 MIAAYVNEGKVEDALGL-LRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQ- 483

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG------------F 407
                       ++ +VVS+N +IS F Q+GL  E L +   MQ                
Sbjct: 484 ----------MGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSM 533

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTA 464
             + +T+T  L A ++L     GK+ H Y LR+G  FE    + S L+DMYAK   + +A
Sbjct: 534 RPNPITITGALPACADLNLWCQGKEIHGYTLRNG--FEPNIFVSSALVDMYAKCHDMDSA 591

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
            ++F + D   R+  +WNA++AGY  N   EEA   F +ML   + P+ +T   + PAC 
Sbjct: 592 NKVFFRIDG--RNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACG 649

Query: 525 PMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
            +  I  G+ LHG++ +  LD+    + ++LIDMY+K G I  A +VF    EK+   + 
Sbjct: 650 DIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWN 709

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI  +  HGM+  A ++F  M+  GI PD ITFV++LSAC+  GLV+EG + F+ M+  
Sbjct: 710 AMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEIS 769

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y +  + EHY C+  +LG  G + EA +F++++    +   +W +LL +CR+H + E+ E
Sbjct: 770 YGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDAC-MWATLLQACRVHSNPEIGE 828

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
             AK L E++  N+    ++LLSNIY   G W+    +R  MR R L     CS++ VG 
Sbjct: 829 RAAKALFELEPDNATN--YMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGS 886

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   F   +  HP+  +I E  + LA +M  +G
Sbjct: 887 HXCTFKGGESSHPELEEILETWDXLARKMELSG 919



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/622 (24%), Positives = 265/622 (42%), Gaps = 108/622 (17%)

Query: 46  LSKICQEGRPHLARQLFDSIT----RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           LS   + G   LA +  + +     +PT   WN II G V N    +A+ ++S+M     
Sbjct: 291 LSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLW--- 347

Query: 102 YTSCDNY-TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           Y    N  T +S+L AC   + LR+GKA+H    +     + +V  S+++MYS C S   
Sbjct: 348 YPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGS--- 404

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                          YD   KVF     +N   WN +++ YV   +  +A+   R M + 
Sbjct: 405 ---------------YDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKD 449

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G +P  I++  +    +  G    A  +   +V++G                        
Sbjct: 450 GWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMG------------------------ 485

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV------------QVLELDEIVF 328
                    L+ N   +N +I G+ Q+    EA+++F             +VL L  +  
Sbjct: 486 ---------LKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNL-SMRP 535

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           + +T   AL A + L     G+++H Y ++N     + V +A+++               
Sbjct: 536 NPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVF 595

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                R+ VSWN +++ ++ N   +E L L  EM  +G    S+T   L  A  ++    
Sbjct: 596 FRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIR 655

Query: 429 VGKQTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
            G+  H Y  +  +      + S LIDMYAK G I  A+ +F+     ++D   WNAMI+
Sbjct: 656 FGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDS--EVEKDVPLWNAMIS 713

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLD 545
            ++ +G+   AF  F QM    + P+ +T  S+L AC   G +E G K  +   I Y + 
Sbjct: 714 AFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVA 773

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG---MSERAL-S 600
             +   T ++ +   +G+++ A +   ++P   ++  + T++     H    + ERA  +
Sbjct: 774 ATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKA 833

Query: 601 LFRSMKGCGIEPDAITFVAVLS 622
           LF       +EPD  T   +LS
Sbjct: 834 LFE------LEPDNATNYMLLS 849


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/625 (32%), Positives = 331/625 (52%), Gaps = 46/625 (7%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           +K+ L   +FD M  +++ +WN +++ Y +  R    +R  RM+         +S+  + 
Sbjct: 78  AKFSLARDLFDKMPHKDLFSWNLMLTGYARNRR----LRDARMLFDSMPEKDVVSWNAML 133

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
                 G    A  V+  +    S   N L  A      Y   G  + AR++F++  +  
Sbjct: 134 SGYVRSGHVDEARDVFDRMPHKNSISWNGLLAA------YVRSGRLEEARRLFESKSDWE 187

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
               N ++GGYV+ N   +A +LF Q+      V D +++ + +S  +Q  +L   ++L 
Sbjct: 188 LISCNCLMGGYVKRNMLGDARQLFDQI-----PVRDLISWNTMISGYAQDGDLSQARRL- 241

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                 F   PV        RDV +W  M+ A+VQ+G+ DE   +  EM ++  M    +
Sbjct: 242 ------FEESPV--------RDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREM----S 283

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKN 471
              +++  +  +  D+G++     L   + F  + S+  +I  Y ++G +  AR +F+  
Sbjct: 284 YNVMIAGYAQYKRMDMGRE-----LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMM 338

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
               RD  +W A+IAGY QNGL EEA     +M     + N  T    L AC  +  +EL
Sbjct: 339 PQ--RDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALEL 396

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           GKQ+HG  +R   ++   VG +L+ MY K G I+ A +VF  +  K+ V++ TM+ GY +
Sbjct: 397 GKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYAR 456

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG   +AL++F SM   G++PD IT V VLSACS+ GL D G + F  M ++Y I P+++
Sbjct: 457 HGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSK 516

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY C+ D+LGR G + EA   ++ +  E +    WG+LLG+ R+HG+ EL E  A+ + +
Sbjct: 517 HYACMIDLLGRAGCLEEAQNLIRNMPFEPDA-ATWGALLGASRIHGNMELGEQAAEMVFK 575

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           M+  NS  G +VLLSN+YA  G W +V K+R +MR+ G++K  G SW++V   ++ F   
Sbjct: 576 MEPHNS--GMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVG 633

Query: 772 DQEHPQSHKIYEMLERLAMEMRNAG 796
           D  HP+  +IY  LE L ++M++ G
Sbjct: 634 DCFHPEKGRIYAFLEELDLKMKHEG 658



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 212/475 (44%), Gaps = 71/475 (14%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           + AI  +   G  D A  +FD    RN+  +N MI GY++N     A +LF ++   D  
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKD-- 94

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
           +F     L+  +   +L++  +                  + +++ E+DVVSWN M+S +
Sbjct: 95  LFSWNLMLTGYARNRRLRDARM------------------LFDSMPEKDVVSWNAMLSGY 136

Query: 387 VQNGLDDE-----------------GLMLVY----EMQKQGFMIDSVTVTALLSA----A 421
           V++G  DE                 GL+  Y     +++   + +S +   L+S      
Sbjct: 137 VRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMG 196

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
             ++   +G    A  L   I    + S+  +I  YA+ G +  AR++FE  +S  RD  
Sbjct: 197 GYVKRNMLGD---ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE--ESPVRDVF 251

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           TW AM+  Y Q+G+L+EA   F +M +       V IA           +++G++L    
Sbjct: 252 TWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYA----QYKRMDMGREL---- 303

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
              +   N+     +I  Y ++G +  A N+F  +P+++SV++  +I GY Q+G+ E A+
Sbjct: 304 FEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAM 363

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD- 658
           ++   MK  G   +  TF   LSAC+    ++ G Q+   +     ++   E  C V + 
Sbjct: 364 NMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV-----VRTGYEKGCLVGNA 418

Query: 659 ---MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
              M  + G + EAY+  +  G +   +  W ++L     HG    A  V + ++
Sbjct: 419 LVGMYCKCGCIDEAYDVFQ--GVQHKDIVSWNTMLAGYARHGFGRQALTVFESMI 471



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/541 (21%), Positives = 228/541 (42%), Gaps = 85/541 (15%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P   + +  + +S   +  +  LAR LFD +       WN ++ G+  N    +A +L+
Sbjct: 59  MPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLF 118

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             M +       D  +++++L     + ++   + V   F R   + +   +N LL  Y 
Sbjct: 119 DSMPEK------DVVSWNAMLSGYVRSGHVDEARDV---FDR-MPHKNSISWNGLLAAYV 168

Query: 154 TC----------LSSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSW 200
                        S  D E++    +   Y K +++    ++FD +  R++++WNT++S 
Sbjct: 169 RSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISG 228

Query: 201 YVKTERYVEAVRQFR---------------MMLRMGIRPSTISFVNVFPA---------L 236
           Y +     +A R F                  ++ G+        +  P          +
Sbjct: 229 YAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMI 288

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +    YK  D+   L  ++    +    +  S    Y + G    AR +FD   +R++  
Sbjct: 289 AGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG---YCQNGDLAQARNLFDMMPQRDSVS 345

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  +I GY QN    EA+ + V+ ++ D    +  TF  ALSA + +  L+LG+Q+H  +
Sbjct: 346 WAAIIAGYAQNGLYEEAMNMLVE-MKRDGESLNRSTFCCALSACADIAALELGKQVHGQV 404

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           ++       +V NA++                     +D+VSWNTM++ + ++G   + L
Sbjct: 405 VRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQAL 464

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGI-----HFEGMESY 450
            +   M   G   D +T+  +LSA S+    D G +  H+    +GI     H+  M   
Sbjct: 465 TVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACM--- 521

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG---LLEEAFVAFRQMLEH 507
            ID+  ++G ++ A+ +  +N   + D ATW A++     +G   L E+A     +M  H
Sbjct: 522 -IDLLGRAGCLEEAQNLI-RNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPH 579

Query: 508 N 508
           N
Sbjct: 580 N 580



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 44/282 (15%)

Query: 33  PIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           P P + +  I   +S  CQ G    AR LFD + +  +V W  II G+  N L  EA+ +
Sbjct: 308 PFPNIGSWNIM--ISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNM 365

Query: 93  YSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
             +MK+     S +  T+   L ACA+   L +GK VH   +R        V N+L+ MY
Sbjct: 366 LVEMKRDG--ESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMY 423

Query: 153 STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
             C    +A              YD    VF  ++ +++V+WNT+++ Y +     +A+ 
Sbjct: 424 CKCGCIDEA--------------YD----VFQGVQHKDIVSWNTMLAGYARHGFGRQALT 465

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN----DLFVASS 268
            F  M+  G++P  I+ V V  A S  G           L   G+EY +    D  +  +
Sbjct: 466 VFESMITAGVKPDEITMVGVLSACSHTG-----------LTDRGTEYFHSMNKDYGITPN 514

Query: 269 A------IFMYAELGCFDFARKIFDNC-LERNTEVWNTMIGG 303
           +      I +    GC + A+ +  N   E +   W  ++G 
Sbjct: 515 SKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 223/733 (30%), Positives = 373/733 (50%), Gaps = 67/733 (9%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           LF+ +     V WN+I+ G + N    +++  + +M  S      D+ + S  + AC+  
Sbjct: 257 LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERA--DHVSLSCAISACSSL 314

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             L  G+ +H   I+     + FV   NSL+++YS C      E V            D+
Sbjct: 315 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQC------EAV------------DV 356

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG----IRPSTISFVNVFP 234
              VF  M  +++V+WN ++  Y   E   EA   F +M+ M      +P  ++   + P
Sbjct: 357 AETVFREMAYKDIVSWNAMMEGYASNENIHEA---FDLMVEMQTTGCFQPDIVTLTTMLP 413

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKIFDNCLERN 293
             + L  Y+    ++G  ++     V D L + +  I MY++    + A  +F +  + +
Sbjct: 414 LCAELMLYREGRTIHGYAIR--RHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQID 471

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI GY QN +  +A  LF ++L   +       F + LS+ +    L+ G+ +H
Sbjct: 472 LVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVF-AILSSCNSANSLNFGKSVH 530

Query: 354 AYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLD 392
            + +K+      +++N++++                      D+ SWNT+I   V+    
Sbjct: 531 IWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQF 590

Query: 393 DEGLMLVYEMQKQG--FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
            E L   + + +QG  F  DS+T+  +LSA +N+   + GK  H+  L+     +  +++
Sbjct: 591 QEALE-TFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQN 649

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI MY +   I +AR++F+ +   +    TWN MI+  + N    EA   FR +     
Sbjct: 650 SLITMYDRCRDINSARKVFKFHSISNL--CTWNCMISALSHNKESREALELFRHL---QF 704

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN  TI SVL AC  +G +  GKQ+HG++ RY   QN F+  +L+D+YS  G ++ A  
Sbjct: 705 KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVK 764

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF +  +K+   + +MI  YG HG  E+A+ LF  M   GI+    TFV++LSACS++GL
Sbjct: 765 VF-RHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGL 823

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V++GLQ ++ M ++Y I+P  EH   V +ML R G++ EAY+F K L    +   +WG L
Sbjct: 824 VNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASS-GVWGML 882

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L  C  HG  EL + VA+KL EM+ +N   GY++ L+N+Y   G+W++   +R+ + ++G
Sbjct: 883 LSVCNYHGELELGKKVAEKLFEMEPQN--VGYYISLANMYVAAGSWKDATDLRQYIHDQG 940

Query: 750 LRKEVGCSWIDVG 762
           LRK  G S IDVG
Sbjct: 941 LRKCAGYSLIDVG 953



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 186/715 (26%), Positives = 320/715 (44%), Gaps = 59/715 (8%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           PT  S  +   + G    +R LF+ I     + WN II   + N     A+  + +M K 
Sbjct: 133 PTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKD 192

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LS 157
              T  D+ T   V+   +  +N   G+ +HC  I+        + N+L+NMY+ C  ++
Sbjct: 193 Q--TRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVN 250

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
           S D+E                   +F+ M  ++VV+WN+I+   +      +++  FR M
Sbjct: 251 SSDSEC------------------LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRM 292

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
                R   +S      A SSLG+    + ++G  +KLG +  + + VA+S I +Y++  
Sbjct: 293 NFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCE 352

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             D A  +F     ++   WN M+ GY  N +  EA +L V++        D VT  + L
Sbjct: 353 AVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTML 412

Query: 338 SAVSQLQELDLGQQLHAYIIK---------------------NFVALPVIVLNAVIERDV 376
              ++L     G+ +H Y I+                     N V    ++ ++  + D+
Sbjct: 413 PLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDL 472

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSWN MIS + QN   ++   L  E+   G    S TV A+LS+ ++  + + GK  H +
Sbjct: 473 VSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIW 532

Query: 437 LLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            L+ G ++   + + L+ MY  SG + +   I ++N S   D A+WN +I G  +    +
Sbjct: 533 QLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSS-IADIASWNTIIVGCVRGDQFQ 591

Query: 496 EAFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIEL---GKQLHGFSIRYLLDQNVFVG 551
           EA   F  M +  +   + +T+ +VL A   + NIEL   GK LH  +++     +  V 
Sbjct: 592 EALETFMLMRQGPSFNYDSITLVNVLSA---VANIELLNQGKSLHSLALKSPFGSDTRVQ 648

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            SLI MY +   IN A  VF      N  T+  MI     +  S  AL LFR ++    +
Sbjct: 649 NSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQ---FK 705

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           P+  T V+VLSAC+  G++  G Q+     + Y  Q ++     + D+    G++  A  
Sbjct: 706 PNEFTIVSVLSACTRIGVLIHGKQVHGYTFR-YGYQQNSFISAALVDLYSTCGRLDNA-- 762

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            VK           W S++ +   HG+ E A  +  ++ ++  + +   +  LLS
Sbjct: 763 -VKVFRHSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLS 816


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 225/766 (29%), Positives = 381/766 (49%), Gaps = 89/766 (11%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           +A  LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V K
Sbjct: 117 VAEVLFSKLRVRNVFSW-AAIIGVKCRIGLVEGALMGFVEMLENGIFP--DNFVVPNVCK 173

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC   +  R G+ VH +  +   +   FV +SL +MY  C    DA              
Sbjct: 174 ACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDAR------------- 220

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFD +  RNVVAWN ++  YV+     EA+R    M + G+ P+ ++      A
Sbjct: 221 -----KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSA 275

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +++   +     + + +  G E   D  + +S +  Y ++G  D+A  IFD  +E++  
Sbjct: 276 SANMRGIEEGKQSHAIAIVNGLEL--DNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVV 333

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +I GYV       AI +  Q++ L+ + FD VT  + +SA ++ Q L LG+++  Y
Sbjct: 334 TWNLLISGYVHQGLVENAIYM-CQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCY 392

Query: 356 IIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            I++     ++                    V ++ +++D++ WNT+++A+ ++GL  E 
Sbjct: 393 CIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEA 452

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L YEMQ +    + +T   ++   S LRN                             
Sbjct: 453 LRLFYEMQLESVPPNVITWNLII--LSLLRN----------------------------- 481

Query: 456 AKSGLIKTARQIFEKNDSGDR--DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
              G +  A+++F +  S     +  +W  M+ G  QNG  EEA +  R+M E  + PNV
Sbjct: 482 ---GQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNV 538

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            +I   L AC  + ++  G+ +HG+ IR      +  + TSL+DMY+K G IN A  VF 
Sbjct: 539 FSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFG 598

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVD 631
                    Y  MI  Y  +G  + A++L+RS++   GI+PD IT   VLSAC++AG ++
Sbjct: 599 SKLYSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDIN 658

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           + ++IF  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  + +   I  SL+ 
Sbjct: 659 QAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYKPDARMIQ-SLVA 717

Query: 692 SCRLHGH-SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
           SC+   H SEL + ++ +LLE +  NS  G +V +SN YA EG+W+ V K+R+ M+ +GL
Sbjct: 718 SCKKQQHKSELMDYLSSQLLESEPENS--GNYVRVSNAYAVEGSWDEVVKMREMMKVKGL 775

Query: 751 RKEVGCSWIDVGGY--VNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           +K+ GCSWI V G   V+ F + D  H ++++I ++L  L  +MR+
Sbjct: 776 KKKPGCSWIQVKGEEGVHVFVANDNTHLRNNEIRKILALLLYDMRS 821



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 261/525 (49%), Gaps = 29/525 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D ++   ++  ++K G  Y  + ++ +  +  YA+    + A  +F     RN   W  +
Sbjct: 77  DLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAI 136

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE + I  D+    +   A   LQ    G+ +H Y+ K  
Sbjct: 137 IGVKCRIGLVEGALMGFVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 195

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + ER+VV+WN ++  +VQNG+++E + L+ 
Sbjct: 196 LHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLS 255

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+K+G     VTV+  LSA++N+R  + GKQ+HA  + +G+  +  + + +++ Y K G
Sbjct: 256 DMRKEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVG 315

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI  A  IF++    ++D  TWN +I+GY   GL+E A    + M   N+  + VT++++
Sbjct: 316 LIDYAEMIFDRMI--EKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTL 373

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+  + ++ + ++ +DMY+K G +  A  VF    +K+ 
Sbjct: 374 MSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDL 433

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G+S  AL LF  M+   + P+ IT+  ++ +    G V+E  ++F L
Sbjct: 434 ILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF-L 492

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG---NVLEIWGSLLGSCRLH 696
             Q     P+   +  + + L + G   EA  F++++ E G   NV  I  + L +C   
Sbjct: 493 QMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVA-LSACVNL 551

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
                   +   ++     +S       L ++YA+ G+    ++V
Sbjct: 552 ASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERV 596



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 201/419 (47%), Gaps = 37/419 (8%)

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           +    +N    EA+ L  + ++   +      F   L      ++L  GQQ+HA I+KN 
Sbjct: 34  VSSLCKNGEIREALSLVTE-MDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARILKNG 92

Query: 360 -------FVALPVIVLNAVIE--------------RDVVSWNTMISAFVQNGLDDEGLML 398
                  ++   +++  A  +              R+V SW  +I    + GL +  LM 
Sbjct: 93  DFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMG 152

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAK 457
             EM + G   D+  V  +  A   L+    G+  H Y+ + G+H    + S L DMY K
Sbjct: 153 FVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGK 212

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G++  AR++F+  +  +R+   WNA++ GY QNG+ EEA      M +  V P  VT++
Sbjct: 213 CGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVS 270

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           + L A   M  IE GKQ H  +I   L+ +  +GTS+++ Y K G+I+YA  +F ++ EK
Sbjct: 271 TCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEK 330

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           + VT+  +I GY   G+ E A+ + + M+   ++ D +T   ++SA +    +  G ++ 
Sbjct: 331 DVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEV- 389

Query: 638 DLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
               Q Y I+ S E    +A    DM  + G VV+A +      ++  +L  W +LL +
Sbjct: 390 ----QCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLIL--WNTLLAA 442



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 199/452 (44%), Gaps = 80/452 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L   AI +   M+  +   
Sbjct: 306 SILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKF 365

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A A T+NL++GK V C+ IR        + ++ ++MY+ C S +DA+ 
Sbjct: 366 DC--VTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAK- 422

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+  +++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 423 -----------------KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVP 465

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS  F            
Sbjct: 466 PNVITWNLIILSLLRNGQVNEAKEMF-------------LQMQSSGTF------------ 500

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  +   ALSA   L
Sbjct: 501 --------PNMISWTTMMNGLVQNGCSEEAI-LFLRKMQESGMRPNVFSITVALSACVNL 551

Query: 344 QELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSWNTM 382
             L  G+ +H YII+N        +   ++              V  + +  ++  +N M
Sbjct: 552 ASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAM 611

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RH 440
           ISA+   G   E + L   +++  G   D++T+T +LSA ++  + +   +    ++ +H
Sbjct: 612 ISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDINQAIEIFTDMVSKH 671

Query: 441 GIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           G+    +E Y  ++D+ A +G  + A  + E+
Sbjct: 672 GMK-PCLEHYGLMVDLLASAGETEKALSLIEE 702


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 230/766 (30%), Positives = 376/766 (49%), Gaps = 75/766 (9%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            GR   AR LFD +     V+WN ++ G+V   L  EA  L+S+  +S      D ++   
Sbjct: 776  GRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSG--LRPDEFSVQL 833

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +L   +E  N   GK +                   +  Y+  LS  D            
Sbjct: 834  ILNGVSEV-NWDEGKWL----------------ADQVQAYAAKLSLSD------------ 864

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                D+ C             WN  +S  +       A+  F  M  + I    ++ + V
Sbjct: 865  -DNPDVFC-------------WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              A++   D +    V+G+ VK G +  +D+ VA+S + MY+++GC  FAR++F++    
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLD--SDVSVANSLVNMYSKMGCAYFAREVFNDMKHL 968

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQ 351
            +   WN+MI    Q++   E++ LF+ +L  + +  D  T  S L A S L + L++ +Q
Sbjct: 969  DLISWNSMISSCAQSSLEEESVNLFIDLLH-EGLKPDHFTLASVLRACSSLIDGLNISRQ 1027

Query: 352  LHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGL 391
            +H + +K      +FVA  +I              +     + D+  WN M+  ++    
Sbjct: 1028 IHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGND 1087

Query: 392  DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY 450
              + L L   + K G   D +T+     A   L   D GKQ HA+ ++ G   +  + S 
Sbjct: 1088 GKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSG 1147

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            ++DMY K G +  A  +F  N     D   W +MI+G   NG  ++A   + +M +  V 
Sbjct: 1148 ILDMYIKCGDMVNAGIVF--NYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 1205

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            P+  T A+++ A + +  +E G+QLH   I+     + FVGTSL+DMY+K G I  A  +
Sbjct: 1206 PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRL 1265

Query: 571  FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
            F K+  +N   +  M++G  QHG +E A++LF+SMK  GIEPD ++F+ +LSACS+AGL 
Sbjct: 1266 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT 1325

Query: 631  DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
             E  +    M  +Y I+P  EHY C+ D LGR G V EA + ++ +  + +   I  +LL
Sbjct: 1326 SEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA-SINRALL 1384

Query: 691  GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
            G+CR+ G  E  + VA +L  ++  +S    +VLLSNIYA    W++V   RK M+ + +
Sbjct: 1385 GACRIQGDVETGKRVAARLFALEPFDSAA--YVLLSNIYAAANRWDDVTDARKMMKRKNV 1442

Query: 751  RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +K+ G SWIDV   ++ F   D+ HPQ+  IY+ +E +   +R  G
Sbjct: 1443 KKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDG 1488



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 176/674 (26%), Positives = 308/674 (45%), Gaps = 84/674 (12%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVC-----NNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            ARQ+FD+      V WN I+  +       +    E + L+  ++ S   T+    T + 
Sbjct: 675  ARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTT--RMTLAP 732

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            VLK C  +  L   + VH + I+       FV  +L+N+YS C    DA +         
Sbjct: 733  VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARL--------- 783

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                     +FD MR R+VV WN ++  YV+     EA + F    R G+RP   S   +
Sbjct: 784  ---------LFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLI 834

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               +S +                   +    ++A       A+L   D    +F      
Sbjct: 835  LNGVSEV------------------NWDEGKWLADQVQAYAAKLSLSDDNPDVF------ 870

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
                WN  +   +       AIE FV +  L+ I +D VT L  L+AV+   +L+LG+Q+
Sbjct: 871  ---CWNKKLSECLWAGDNWGAIECFVNMNGLN-IDYDAVTLLVVLAAVAGTDDLELGKQV 926

Query: 353  HAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLD 392
            H   +K+ +   V V N+++                      D++SWN+MIS+  Q+ L+
Sbjct: 927  HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 986

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHG-IHFEGMESY 450
            +E + L  ++  +G   D  T+ ++L A S+L +  ++ +Q H + L+ G I    + + 
Sbjct: 987  EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046

Query: 451  LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            LID+Y+KSG ++ A  +F+  D  D D A WNAM+ GY      ++A   F  + +    
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKD--DLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEK 1104

Query: 511  PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             + +T+A+   AC  +  ++ GKQ+H  +I+   D ++ V + ++DMY K G +  A  V
Sbjct: 1105 SDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIV 1164

Query: 571  FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
            F  I   + V +T+MI G   +G  ++AL ++  M+   + PD  TF  ++ A S    +
Sbjct: 1165 FNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 1224

Query: 631  DEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            ++G Q   L     K+   ++ +    + DM  + G + +AY   K++      + +W +
Sbjct: 1225 EQGRQ---LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN--IALWNA 1279

Query: 689  LLGSCRLHGHSELA 702
            +L     HG++E A
Sbjct: 1280 MLVGLAQHGNAEEA 1293



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 169/606 (27%), Positives = 281/606 (46%), Gaps = 56/606 (9%)

Query: 113  VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +L+    T NL +GK  H   +   S    F+ N+LL MYS C S   A           
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSAR---------- 676

Query: 173  YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----ERYVEAVRQFRMMLRMGIRPST- 226
                    +VFDT   R++V WN I+  Y  +         E +  FR+ LR  +  +T 
Sbjct: 677  --------QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRL-LRASLGSTTR 727

Query: 227  ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            ++   V     + G   +A+ V+G  +K+G E+  D+FV+ + + +Y++ G    AR +F
Sbjct: 728  MTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEW--DVFVSGALVNIYSKCGRMRDARLLF 785

Query: 287  DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQ 342
            D   ER+  +WN M+ GYVQ     EA +LF +     L  DE  F     L+ +S V+ 
Sbjct: 786  DWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDE--FSVQLILNGVSEVNW 843

Query: 343  LQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             +   L  Q+ AY  K    L +   N     DV  WN  +S  +  G +   +     M
Sbjct: 844  DEGKWLADQVQAYAAK----LSLSDDNP----DVFCWNKKLSECLWAGDNWGAIECFVNM 895

Query: 403  QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
                   D+VT+  +L+A +   + ++GKQ H   ++ G+  +  + + L++MY+K G  
Sbjct: 896  NGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCA 955

Query: 462  KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
              AR++F  ND    D  +WN+MI+   Q+ L EE+   F  +L   + P+  T+ASVL 
Sbjct: 956  YFAREVF--NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLR 1013

Query: 522  ACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+ +   + + +Q+H  +++     + FV T+LID+YSKSG +  A  +F    + +  
Sbjct: 1014 ACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLA 1073

Query: 581  TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             +  M+ GY      ++AL LF  +   G + D IT      AC    L+D+G QI    
Sbjct: 1074 CWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQI---- 1129

Query: 641  QQEYKIQPSTEH----YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
               + I+   +        + DM  + G +V A      +    +V   W S++  C  +
Sbjct: 1130 -HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV--AWTSMISGCVDN 1186

Query: 697  GHSELA 702
            G+ + A
Sbjct: 1187 GNEDQA 1192



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 172/388 (44%), Gaps = 36/388 (9%)

Query: 51   QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
            + G+   A  LF +        WN ++ G++  N   +A+ L+S + KS   +  D  T 
Sbjct: 1053 KSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS--DQITL 1110

Query: 111  SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            ++  KAC     L  GK +H H I+   +    V + +L+MY  C   ++A +       
Sbjct: 1111 ATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGI------- 1163

Query: 171  VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                       VF+ +   + VAW +++S  V      +A+R +  M +  + P   +F 
Sbjct: 1164 -----------VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFA 1212

Query: 231  NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
             +  A S +   +    ++  ++KL  + V+D FV +S + MYA+ G  + A ++F    
Sbjct: 1213 TLIKASSCVTALEQGRQLHANVIKL--DCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMN 1270

Query: 291  ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             RN  +WN M+ G  Q+ +  EA+ LF + ++   I  D V+F+  LSA S      L  
Sbjct: 1271 VRNIALWNAMLVGLAQHGNAEEAVNLF-KSMKSHGIEPDRVSFIGILSACSH---AGLTS 1326

Query: 351  QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
            + + Y       L  +  +  IE ++  ++ ++ A  + GL  E   ++  M    F   
Sbjct: 1327 EAYEY-------LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP---FKAS 1376

Query: 411  SVTVTALLSAASNLRNQDVGKQTHAYLL 438
            +    ALL A     + + GK+  A L 
Sbjct: 1377 ASINRALLGACRIQGDVETGKRVAARLF 1404


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 221/727 (30%), Positives = 371/727 (51%), Gaps = 60/727 (8%)

Query: 68  PTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           P   +WN+++      +     +  + +M+ S    S   +T   V  A AE   L +G 
Sbjct: 70  PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPS--RFTAPLVASAAAELGALPVGA 127

Query: 128 AVHCHFIR---CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           AVH + +R      + S  V +SL+ MY+ C S  DA                   ++FD
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDA------------------VRLFD 169

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTISFVNVFPALSSLG 240
            M  R+VVAW  ++S  V   +  E +     M+R     G RP++ +  +   A   LG
Sbjct: 170 EMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLG 229

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      ++G  VK G  +     V SS   MY +    + AR +F    E++   W ++
Sbjct: 230 ELSVGTCLHGFGVKAGVGHCPS--VVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSL 287

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IG Y +  H  +A+ELF+  +E   +  D+V     L+ +    ++  G+  HA I++  
Sbjct: 288 IGAYCRAGHAEKAVELFLG-MEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRN 346

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V++ NA+I                    +RD  SW++M+ A+ + GLD + L L  
Sbjct: 347 FGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYR 406

Query: 401 EMQ---KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEGMESYLIDMYA 456
           EMQ   K  F  D+ ++ +++S+ S L    +G+  H Y ++H       + + LI MY 
Sbjct: 407 EMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYG 466

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G    AR+IF    +  +D  TW+A+I+ Y+  G  ++A + + QML   V PN  T+
Sbjct: 467 RCGNFDVARKIFGMVKT--KDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATL 524

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            SV+ +C  +  +E G+ +H       L+ ++ + T+L+DMY K G +  A  +F  + E
Sbjct: 525 VSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLE 584

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++ VT+  MI GYG HG + +AL LF  M+   ++P+++TF+A+LSAC +AGLVD+G ++
Sbjct: 585 RDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M +EY ++P+ +HY C+ D+LG+ G + EA + V  +  E +   IWG+LLG+C++H
Sbjct: 645 FTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDG-GIWGTLLGACKMH 702

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            + E+   VAKK    D  N   GY++L+SN Y     W  ++K+R  M+  G+ K +G 
Sbjct: 703 DNFEMGLRVAKKAFASDPEND--GYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGW 760

Query: 757 SWIDVGG 763
           S ID+ G
Sbjct: 761 STIDICG 767


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 215/666 (32%), Positives = 347/666 (52%), Gaps = 53/666 (7%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR +FD I  P  V W++++  +  N +P +A+  +  M+       C+ Y    VL
Sbjct: 53  PSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRG--VPCNEYALPIVL 110

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K CA   ++R G  VH   +        FV N+L+ MY               +  VD +
Sbjct: 111 K-CAP--DVRFGAQVHALAVATRLIQDVFVTNALVAMYG-------------GFGMVDEA 154

Query: 175 KYDLVCKVFDT-MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           K     ++FD     RN V+WN ++S YVK +R  +AV  FR M+  G RP+   F  V 
Sbjct: 155 K-----RIFDEPGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERPNEFGFSCVV 209

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A +   D+++   V+G++V+ G  Y  D+F A++ + MY++LG  + A  +F+     +
Sbjct: 210 NACTGSRDWETGRQVHGMVVRTG--YDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAAD 267

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN +I G V + H   A+EL +Q+  L  +V +  T  S L A +     +LG+Q+H
Sbjct: 268 VVSWNALIAGCVTHGHDHRALELLLQMKPLG-VVPNVFTLSSVLKACAGAGAFNLGRQIH 326

Query: 354 AYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
            ++IK       FVA+ ++              V + +  RD++ WN +IS    +G   
Sbjct: 327 GFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 386

Query: 394 EGLMLVYEMQKQGFMID--SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
           E L L + M+K+G  +D    T+ A+L + ++L      KQ HA   + G+  +  + + 
Sbjct: 387 EVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNG 446

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LID Y K G +  A ++FE++ S D   +T  +M+   +Q    E+A   F QML   + 
Sbjct: 447 LIDSYWKCGRLDYAIKVFEESCSDDIISST--SMMTALSQCDHGEDAIKLFVQMLRKGLE 504

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+   ++S+L AC  +   E GKQ+H   I+     +VF G +L+  Y+K G I  A   
Sbjct: 505 PDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMA 564

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F+ +PEK  V+++ MI G  QHG  +RAL LF  M   G+ P+ IT  +VLSAC++AGLV
Sbjct: 565 FSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLV 624

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           D+  + F+ M++ + I  + EHY C+ D+LGR GK+ +A E V  +  + N   +WG+LL
Sbjct: 625 DDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLKDAMELVNNMPFQANA-AVWGALL 683

Query: 691 GSCRLH 696
           G+ RL+
Sbjct: 684 GASRLN 689



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 160/628 (25%), Positives = 290/628 (46%), Gaps = 57/628 (9%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T  S L     +R+L  G  +H H ++  S       N LL+ YS C     A       
Sbjct: 6   TIGSALARFGASRSLLAGAHLHSHLLK--SGLLASYSNHLLSFYSRCRLPSAAR------ 57

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        VFD +     V+W+++V+ Y       +A+  FR M   G+  +  +
Sbjct: 58  ------------AVFDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYA 105

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
              V   L    D +    V+ L V   +  + D+FV ++ + MY   G  D A++IFD 
Sbjct: 106 LPIV---LKCAPDVRFGAQVHALAV--ATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDE 160

Query: 289 -CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN MI  YV+N+   +A+ +F +++   E   ++  F   ++A +  ++ +
Sbjct: 161 PGGERNAVSWNGMISAYVKNDRCRDAVGVFREMVWSGERP-NEFGFSCVVNACTGSRDWE 219

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+Q+H  +++      V   NA+++                     DVVSWN +I+  V
Sbjct: 220 TGRQVHGMVVRTGYDKDVFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCV 279

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EG 446
            +G D   L L+ +M+  G + +  T++++L A +     ++G+Q H ++++      E 
Sbjct: 280 THGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEF 339

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +   L+DMYAK G +  AR++F+      RD   WNA+I+G + +G   E    F +M +
Sbjct: 340 VAVGLVDMYAKDGFLDDARKVFDFMPR--RDLILWNALISGCSHDGRHGEVLSLFHRMRK 397

Query: 507 HNVTPNV--VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
             +  +V   T+A+VL +   +  I   KQ+H  + +  L  +  V   LID Y K G +
Sbjct: 398 EGLDLDVNRTTLAAVLKSTASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRL 457

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           +YA  VF +    + ++ T+M+    Q    E A+ LF  M   G+EPD+    ++L+AC
Sbjct: 458 DYAIKVFEESCSDDIISSTSMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNAC 517

Query: 625 SYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           +     ++G Q+   L+++++       +   +     + G + +A      L E+G V 
Sbjct: 518 ASLSAYEQGKQVHAHLIKRQFTSDVFAGN--ALVYTYAKCGSIEDADMAFSGLPEKGVV- 574

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLE 711
             W +++G    HGH + A  +  ++L+
Sbjct: 575 -SWSAMIGGLAQHGHGKRALELFHRMLD 601



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 207/465 (44%), Gaps = 52/465 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYS 111
           G   +A  +F+ I     V WN +I G V +   + A+ L  QMK   P     N +T S
Sbjct: 251 GDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMK---PLGVVPNVFTLS 307

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           SVLKACA      +G+ +H   I+  ++   FV   L++MY+      DA          
Sbjct: 308 SVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDAR--------- 358

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPSTISF 229
                    KVFD M RR+++ WN ++S      R+ E +  F  M + G  +  +  + 
Sbjct: 359 ---------KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTL 409

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  + +SL        V+ L  K+G   ++D  V +  I  Y + G  D+A K+F+  
Sbjct: 410 AAVLKSTASLEAICHTKQVHALAEKIG--LLSDSHVVNGLIDSYWKCGRLDYAIKVFEES 467

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              +     +M+    Q +H  +AI+LFVQ+L    +  D     S L+A + L   + G
Sbjct: 468 CSDDIISSTSMMTALSQCDHGEDAIKLFVQMLR-KGLEPDSFVLSSLLNACASLSAYEQG 526

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +Q+HA++IK      V   NA++                    E+ VVSW+ MI    Q+
Sbjct: 527 KQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQH 586

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G     L L + M  +G   +++T+T++LSA ++    D  K+ +   ++     +  E 
Sbjct: 587 GHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKK-YFESMKEAFGIDRTEE 645

Query: 450 Y---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           +   +ID+  ++G +K A ++   N     + A W A++     N
Sbjct: 646 HYACMIDILGRAGKLKDAMELV-NNMPFQANAAVWGALLGASRLN 689



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 180/385 (46%), Gaps = 18/385 (4%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           T+ + L+     R+   G   H++LL+ G+      ++L+  Y++  L   AR +F+  +
Sbjct: 6   TIGSALARFGASRSLLAGAHLHSHLLKSGL-LASYSNHLLSFYSRCRLPSAARAVFD--E 62

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             D    +W++++  Y+ NG+  +A  AFR M    V  N   +  VL  C P  ++  G
Sbjct: 63  IPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLK-CAP--DVRFG 119

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQ 591
            Q+H  ++   L Q+VFV  +L+ MY   G+++ A  +F +   E+N+V++  MI  Y +
Sbjct: 120 AQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVK 179

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM-QQEYKIQPST 650
           +     A+ +FR M   G  P+   F  V++AC+ +   + G Q+  ++ +  Y     T
Sbjct: 180 NDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFT 239

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
            +   + DM  ++G + E    V E     +V+  W +L+  C  HGH   A    + LL
Sbjct: 240 AN--ALVDMYSKLGDI-EMAAVVFEKIPAADVVS-WNALIAGCVTHGHDHRA---LELLL 292

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           +M     +P    L S + A  G       + +++    ++ +         G V+ +A 
Sbjct: 293 QMKPLGVVPNVFTLSSVLKACAG--AGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYA- 349

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNA 795
           KD     + K+++ + R  + + NA
Sbjct: 350 KDGFLDDARKVFDFMPRRDLILWNA 374


>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 232/783 (29%), Positives = 377/783 (48%), Gaps = 118/783 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y  +L+ C   R+   G+ +H   ++   F   + ++   L+  Y+ C    DA      
Sbjct: 47  YGEILQGCVYERDFHTGRQIHARILKNGEFYAKNEYIETKLVIFYAKC----DA------ 96

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                   +++   +F  +R RNV +W  I+    +      A+  F  ML+  I P   
Sbjct: 97  --------HEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNF 148

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              NV  A  +L        ++G + K G  Y + +FVASS   MY + G  D ARK+FD
Sbjct: 149 VVPNVCKACGALQWSGFGRGIHGYVAKSGL-YGDCVFVASSLADMYGKCGVLDDARKVFD 207

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN ++ GYVQN    EAI L   + E + +    VT  + LSA + +  + 
Sbjct: 208 EIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMRE-EGVEPTRVTVSTCLSASANMCGVG 266

Query: 348 LGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFV 387
            G+Q HA  + N + +  I                    V + +I +DVV+WN +IS +V
Sbjct: 267 EGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYV 326

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           Q GL ++ + +   M+ +    D VT++ L+SAA+  +N  +GK+   Y +RH    + G
Sbjct: 327 QQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIG 386

Query: 447 MESYLIDM-------------------------------YAKSGLIKTARQIFEKND--- 472
           + S +IDM                               YA+SGL   A ++F +     
Sbjct: 387 LASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLES 446

Query: 473 -----------------SGDRDQA-----------------TWNAMIAGYTQNGLLEEAF 498
                            +G  D+A                 +W  M+ G  QNG  EEA 
Sbjct: 447 VPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAV 506

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDM 557
              R+M E  + PNV +I   L AC  + ++ LG+ +HG+ IR  L   +V + T+LIDM
Sbjct: 507 HYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDM 566

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I+ A  VF +        +  MI  Y   G  + A+ L+RS++  GI+PD ITF
Sbjct: 567 YAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITF 626

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
             VLSAC++AG +++ ++IF  M  ++ ++P  EHY  + D+L   G+  +A   ++E+ 
Sbjct: 627 TNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMP 686

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +   I  SLL +C     +EL + ++++LLE +  NS  G +V +SN YA EG+W+ 
Sbjct: 687 YKPDARMIQ-SLLVTCNEEHKTELVDYLSRQLLESEPDNS--GNYVTISNAYAGEGSWDE 743

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           V K+R+ M+++GL+K+ GCSWI + G    V+ F + D+ H ++++I  ML  L  +M +
Sbjct: 744 VVKMREMMKDKGLKKKPGCSWIQIKGXXEEVHVFVANDKTHLRNNEIRRMLALLLHDMCS 803

Query: 795 AGN 797
             N
Sbjct: 804 DSN 806



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 133/257 (51%), Gaps = 6/257 (2%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   G+Q HA +L++G 
Sbjct: 16  VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGE 75

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK    + A  +F K     R+  +W A+I    + GL E A +
Sbjct: 76  FYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRV--RNVFSWAAIIGVKCRVGLAEGALM 133

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMY 558
            F +ML+  + P+   + +V  AC  +     G+ +HG+  +  L    VFV +SL DMY
Sbjct: 134 GFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMY 193

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
            K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  G+EP  +T  
Sbjct: 194 GKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVS 253

Query: 619 AVLSACSYAGLVDEGLQ 635
             LSA +    V EG Q
Sbjct: 254 TCLSASANMCGVGEGKQ 270



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 203/453 (44%), Gaps = 83/453 (18%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+      
Sbjct: 289 SVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKF 348

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A A T+N ++GK V C+ IR        + +++++MY+ C S +DA+ 
Sbjct: 349 DC--VTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAK- 405

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            +VFD+  +++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 406 -----------------RVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVP 448

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++   +++ S  +    V+                 
Sbjct: 449 PNAITWNLIILSLFRNGQVDEAKEMF---LQMQSSGIVPTLVS----------------- 488

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVS 341
                        W TM+ G VQN    EA+    ++ E  L   VF   +   ALSA +
Sbjct: 489 -------------WTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVF---SITVALSACA 532

Query: 342 QLQELDLGQQLHAYIIKN-----FVALPVIVLN------------AVIERDVVS----WN 380
            L  L LG+ +H YII+N      V++   +++             V +R   S    +N
Sbjct: 533 NLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFN 592

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-R 439
            MISA+  +G   E + L   ++  G   D++T T +LSA ++  + +   +  + ++ +
Sbjct: 593 AMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSK 652

Query: 440 HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           HG+    +E Y  ++D+ A +G  + A ++ E+
Sbjct: 653 HGME-PCLEHYGLMVDLLASAGETEKALRLMEE 684


>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
 gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
          Length = 632

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 191/566 (33%), Positives = 321/566 (56%), Gaps = 37/566 (6%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +  + F+A+  I  YA  G    +R +FD+   ++  +WN++I G+V+N    EA   F 
Sbjct: 58  FTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWFY 117

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------ 372
           Q+     ++ DD T  +      ++ +L+ G+ +H   +K    L VIV N+++      
Sbjct: 118 QMC-CRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKC 176

Query: 373 --------------ERDVVSWNTMISAFVQNG---LDDEGLMLVYEMQKQGFMIDSVTVT 415
                         ER+V SWN ++S +  +G    D E    V +MQ +G   D+ TV+
Sbjct: 177 GGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVS 236

Query: 416 ALLSAAS-NLRNQDVGKQTHAYLLRHGIHF-EGMESYL----IDMYAKSGLIKTARQIFE 469
           +LL+  + ++  +D G++ H +++R  +    G E +L    IDMY++S  +   R++F+
Sbjct: 237 SLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFD 296

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGN 528
           + +   R+   W AMI G+ QNG LEE  V F +M +   V PN V++ SVLPAC+ +  
Sbjct: 297 RMEC--RNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAG 354

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA-KIPEKNSVTYTTMIL 587
           +   KQ+HG++IR   + +V +  +LIDMYSK G +++A  VF      ++ +++++MI 
Sbjct: 355 LTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMIS 414

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           GYG HG  E A+ ++  M   G +PD IT V VLSACS AGLVDEGL I+     +Y+I+
Sbjct: 415 GYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLVDEGLCIYKSAINKYRIK 474

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P+ E   CV DMLGR G++ +A +++K +  E +   +WG+++ +  +HG+SE+ ++  +
Sbjct: 475 PTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSP-SVWGAVVSASIIHGNSEMQDLAYR 533

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            L++++  N  P  +V LSN++A    W+ V +VR  M++R L K  GCSWI +    + 
Sbjct: 534 FLVQLEPEN--PSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKTPGCSWISINNTTHF 591

Query: 768 FASKDQEHPQSHKIYEMLERLAMEMR 793
           F + D+ HP S  IYE+L  L + M+
Sbjct: 592 FYAADKLHPCSKSIYELLGGLILLMK 617



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 227/446 (50%), Gaps = 34/446 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD++  ++V  WN++++ +VK   Y EA   F  M   G+     +   +      +GD
Sbjct: 84  VFDSLHFKSVYLWNSLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGD 143

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
             +  +++G  +K G  +V D+ VA+S + MY++ G F    K+FD   ERN   WN ++
Sbjct: 144 LNAGKLIHGKSLKTG--FVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVIL 201

Query: 302 GGYVQ--NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-QLQELDLGQQLHAYIIK 358
            GY    + +  + +  FV+ ++++ +  D  T  S L+  +  + + D G++LH +I++
Sbjct: 202 SGYADSGDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVR 261

Query: 359 ------------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
                                   N V +   V + +  R+V +W  MI+  VQNG  +E
Sbjct: 262 IELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEE 321

Query: 395 GLMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLI 452
           GL+L +EMQ + G   + V++ ++L A S +      KQ H Y +R   + +  + + LI
Sbjct: 322 GLVLFHEMQVRDGVEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALI 381

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY+K G +  A+Q+FE   S  RD  +W++MI+GY  +G  EEA   + +ML+    P+
Sbjct: 382 DMYSKCGSLDHAKQVFEFG-SFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPD 440

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           ++TI  VL AC+  G ++ G  ++  +I +Y +   V +   ++DM  +SG +  A +  
Sbjct: 441 MITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYI 500

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSE 596
             +P E +   +  ++     HG SE
Sbjct: 501 KTMPMEPSPSVWGAVVSASIIHGNSE 526



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 227/514 (44%), Gaps = 57/514 (11%)

Query: 26  QIHSLSPPIPKLKTPTIRSRL-SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           Q H+    +   + P + ++L S     G P L+R +FDS+   +  +WN++I GFV N 
Sbjct: 48  QCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNSLINGFVKNR 107

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EA   + QM         D+YT +++ K C E  +L  GK +H   ++        V
Sbjct: 108 AYNEAFGWFYQMCCRGVLL--DDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIV 165

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            NSL++MYS C                    +    K+FD M  RNV +WN I+S Y  +
Sbjct: 166 ANSLMSMYSKC------------------GGFGECLKLFDEMPERNVGSWNVILSGYADS 207

Query: 205 --ERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSS-LGDYKSADVVYGLLVK--LGSE 258
               + + V  F + M   G++P   +  ++    +  +G       ++G +V+  L   
Sbjct: 208 GDRNFDKEVSGFVKDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVG 267

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
              ++ +    I MY+     D  R++FD    RN   W  MI G+VQN    E + LF 
Sbjct: 268 SGTEVHLGCCLIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFH 327

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----- 373
           ++   D +  + V+ +S L A S +  L   +Q+H Y I+      V + NA+I+     
Sbjct: 328 EMQVRDGVEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKC 387

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RD +SW++MIS +  +G  +E + +  +M + G   D +T+  +
Sbjct: 388 GSLDHAKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGV 447

Query: 418 LSAASNLRNQDVG-----KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           LSA S     D G        + Y ++  +    + + ++DM  +SG +  A   + K  
Sbjct: 448 LSACSRAGLVDEGLCIYKSAINKYRIKPTVE---ICACVVDMLGRSGQLGQALD-YIKTM 503

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             +   + W A+++    +G  E   +A+R +++
Sbjct: 504 PMEPSPSVWGAVVSASIIHGNSEMQDLAYRFLVQ 537


>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
 gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/626 (32%), Positives = 333/626 (53%), Gaps = 34/626 (5%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +V AWN  +   V     VE++  FR M R G  P+  +F  V  A + L D    ++V+
Sbjct: 16  SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             L+K  S + +D+FV ++ + M+ +    D+A K+F+   ER+   WN M+ G+ Q+ H
Sbjct: 76  AHLIK--SPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             +A  LF + + L+EI  D VT ++ + + S  + L L + +HA  I+  V + V V N
Sbjct: 134 TDKAFSLFRE-MRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192

Query: 370 AVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
             I                      +R VVSWN+M  A+   G   +   L   M ++ F
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTAR 465
             D  T   L ++  N      G+  H++ +  G     E + ++ I MY+KS    +AR
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF-ISMYSKSEDTCSAR 311

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F+   S  R   +W  MI+GY + G ++EA   F  M++    P++VT+ S++  C  
Sbjct: 312 LLFDIMTS--RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369

Query: 526 MGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            G++E GK +   +  Y   + NV +  +LIDMYSK G I+ A ++F   PEK  VT+TT
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI GY  +G+   AL LF  M     +P+ ITF+AVL AC+++G +++G + F +M+Q Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P  +HY C+ D+LGR GK+ EA E ++ +  + +   IWG+LL +C++H + ++AE 
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA-GIWGALLNACKIHRNVKIAEQ 548

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+ L  ++ + + P  +V ++NIYA  G W+   ++R  M++R ++K  G S I V G 
Sbjct: 549 AAESLFNLEPQMAAP--YVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAM 790
            + F   +  H ++  IY  L  L++
Sbjct: 607 NHSFTVGEHGHVENEVIYFTLNGLSL 632



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 269/590 (45%), Gaps = 82/590 (13%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R+L+      +   WN  I   V  N P E++LL+ +MK+       +N+T+  V KACA
Sbjct: 6   RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGG--FEPNNFTFPFVAKACA 63

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
              ++   + VH H I+       FV  + ++M+  C S             VDY+    
Sbjct: 64  RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS-------------VDYA---- 106

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVF+ M  R+   WN ++S + ++    +A   FR M    I P +++ + +  + S 
Sbjct: 107 -AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NCLERNTEV 296
               K  + ++ + ++LG +    + VA++ I  Y + G  D A+ +F+  +  +R    
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDV--QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS 223

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY- 355
           WN+M   Y       +A  L+  +L  +E   D  TF++  ++    + L  G+ +H++ 
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282

Query: 356 ----------IIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
                      I  F+++           ++ + +  R  VSW  MIS + + G  DE L
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDM 454
            L + M K G   D VT+ +L+S      + + GK   A    +G   + +   + LIDM
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K G I  AR IF+  ++ ++   TW  MIAGY  NG+  EA   F +M++ +  PN +
Sbjct: 403 YSKCGSIHEARDIFD--NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHI 460

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  +VL AC   G++E      G+   +++ Q          +Y+ S  +++        
Sbjct: 461 TFLAVLQACAHSGSLE-----KGWEYFHIMKQ----------VYNISPGLDH-------- 497

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
                  Y+ M+   G+ G  E AL L R+M     +PDA  + A+L+AC
Sbjct: 498 -------YSCMVDLLGRKGKLEEALELIRNMSA---KPDAGIWGALLNAC 537



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 206/454 (45%), Gaps = 51/454 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F+ +       WN ++ GF  +    +A  L+ +M+ +    + D+ T  +++++ 
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE--ITPDSVTVMTLIQSA 163

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  ++L++ +A+H   IR   +    V N+ ++ Y  C   LD+  +             
Sbjct: 164 SFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC-GDLDSAKL------------- 209

Query: 178 LVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
               VF+ + R  R VV+WN++   Y       +A   + +MLR   +P   +F+N+  +
Sbjct: 210 ----VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             +        +++   + LG++   D+   ++ I MY++      AR +FD    R   
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTD--QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCV 323

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  MI GY +     EA+ LF  +++  E   D VT LS +S   +   L+ G+ + A 
Sbjct: 324 SWTVMISGYAEKGDMDEALALFHAMIKSGEKP-DLVTLLSLISGCGKFGSLETGKWIDAR 382

Query: 356 I-IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
             I       V++ NA+I                    E+ VV+W TMI+ +  NG+  E
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--L 451
            L L  +M    +  + +T  A+L A ++  + + G + + ++++   +   G++ Y  +
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCM 501

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +D+  + G ++ A ++  +N S   D   W A++
Sbjct: 502 VDLLGRKGKLEEALELI-RNMSAKPDAGIWGALL 534



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 4/169 (2%)

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           SG      WN  I          E+ + FR+M      PN  T   V  AC  + ++   
Sbjct: 12  SGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCC 71

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           + +H   I+     +VFVGT+ +DM+ K   ++YAA VF ++PE+++ T+  M+ G+ Q 
Sbjct: 72  EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           G +++A SLFR M+   I PD++T + ++ + S+    ++ L++ + M 
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF----EKSLKLLEAMH 176



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H AR +FD+    T V W T+I G+  N +  EA+ L+S+M         ++ T+ +
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD--YKPNHITFLA 464

Query: 113 VLKACAETRNLRIG 126
           VL+ACA + +L  G
Sbjct: 465 VLQACAHSGSLEKG 478


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 197/591 (33%), Positives = 310/591 (52%), Gaps = 58/591 (9%)

Query: 262 DLFVASSAIFMYA--ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           D + AS  +  YA     C  +A+ +F+   + N   WNT+I GY  ++ P ++  +F+ 
Sbjct: 103 DPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLH 162

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
           +L       +  TF     A S+L+ L LG  LH  +IK  ++  + +LN++I       
Sbjct: 163 MLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSG 222

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         +DVVSWN MI+AF   GL D+ L+L  EM+ +    + +T+ ++LS
Sbjct: 223 APDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLS 282

Query: 420 AASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYAKSGLIKTARQIFEKNDS---- 473
           A +   + + G+   +Y+  +G   H   + + ++DMY K G I  A+ +F K       
Sbjct: 283 ACAKKIDLEFGRWICSYIENNGFTEHLI-LNNAMLDMYVKCGCINDAKDLFNKMSEKDIV 341

Query: 474 ------------GDRDQ-------------ATWNAMIAGYTQNGLLEEAFVAFRQM-LEH 507
                       G+ D+             A WNA+I+ Y QNG    A   F +M L  
Sbjct: 342 SWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSK 401

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +  P+ VT+   L A   +G I+ G  +H +  ++ ++ N  + TSL+DMY+K G +N A
Sbjct: 402 DAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKA 461

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF  +  K+   ++ MI     +G  + AL LF SM    I+P+A+TF  +L AC++A
Sbjct: 462 MEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHA 521

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+EG Q+F+ M+  Y I P  +HY CV D+ GR G + +A  F++++        +WG
Sbjct: 522 GLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTA-AVWG 580

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LLG+C  HG+ ELAE+  + LLE++  N   G  VLLSNIYA+ G+WE V  +RK MR+
Sbjct: 581 ALLGACSRHGNVELAELAYQNLLELEPCNH--GAFVLLSNIYAKAGDWEKVSNLRKLMRD 638

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
             ++KE  CS IDV G V+ F   D  HP S KIY  L+ ++ + +  G K
Sbjct: 639 SDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIGYK 689



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 240/540 (44%), Gaps = 84/540 (15%)

Query: 117 CAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           C  T  L   K +H H +R   F +P  +  + LL  Y+  +SS    +         Y+
Sbjct: 82  CTNTMQL---KQIHAHMLRTSRFCDP--YTASKLLTAYA--ISSCSCLI---------YA 125

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR-PSTISFVNVF 233
           K      VF+ + + N+  WNT++  Y  +    ++   F  ML      P+  +F  +F
Sbjct: 126 K-----NVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLF 180

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A S L       V++G+++K  +   +DLF+ +S I  Y   G  D A ++F N   ++
Sbjct: 181 KAASRLKVLHLGSVLHGMVIK--ASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKD 238

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI  +     P +A+ LF Q +E+ ++  + +T +S LSA ++  +L+ G+ + 
Sbjct: 239 VVSWNAMINAFALGGLPDKALLLF-QEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWIC 297

Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM----------- 382
           +YI  N     +I+ NA++                    E+D+VSW TM           
Sbjct: 298 SYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYD 357

Query: 383 --------------------ISAFVQNGLDDEGLMLVYEMQ-KQGFMIDSVTVTALLSAA 421
                               ISA+ QNG     L L +EMQ  +    D VT+   L A+
Sbjct: 358 EAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCAS 417

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           + L   D G   H Y+ +H I+    + + L+DMYAK G +  A ++F   +   +D   
Sbjct: 418 AQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVER--KDVYV 475

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFS 539
           W+AMI      G  + A   F  MLE  + PN VT  ++L ACN  G +  G+QL     
Sbjct: 476 WSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQME 535

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY-GQHGMSERA 598
             Y +   +     ++D++ ++G++  AA+   K+P   +      +LG   +HG  E A
Sbjct: 536 PLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELA 595



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 231/549 (42%), Gaps = 96/549 (17%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRL---SKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QIH+      +   P   S+L     I        A+ +F+ I +P    WNT+I G
Sbjct: 87  QLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRG 146

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +  ++ P ++ L++  M  S      + +T+  + KA +  + L +G  +H   I+   +
Sbjct: 147 YASSSDPTQSFLIFLHMLHSCSEFP-NKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLS 205

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              F+ NSL+N Y +  +                   DL  +VF  M  ++VV+WN +++
Sbjct: 206 SDLFILNSLINFYGSSGAP------------------DLAHRVFTNMPGKDVVSWNAMIN 247

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA-------------- 245
            +       +A+  F+ M    ++P+ I+ V+V  A +   D +                
Sbjct: 248 AFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTE 307

Query: 246 -----DVVYGLLVKLGS-EYVNDLF-------VASSAIFM--YAELGCFDFARKIFDNCL 290
                + +  + VK G      DLF       + S    +  +A+LG +D A  IFD   
Sbjct: 308 HLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMP 367

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            + T  WN +I  Y QN  P  A+ LF ++    +   D+VT + AL A +QL  +D G 
Sbjct: 368 HKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGH 427

Query: 351 QLHAYIIKNFVAL--------------------PVIVLNAVIERDVVSWNTMISAFVQNG 390
            +H YI K+ + L                     + V +AV  +DV  W+ MI A    G
Sbjct: 428 WIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYG 487

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMES 449
                L L   M +     ++VT T +L A +           HA L+  G   FE ME 
Sbjct: 488 QGKAALDLFSSMLEAYIKPNAVTFTNILCACN-----------HAGLVNEGEQLFEQMEP 536

Query: 450 Y------------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                        ++D++ ++GL++ A    EK        A W A++   +++G +E A
Sbjct: 537 LYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPT-AAVWGALLGACSRHGNVELA 595

Query: 498 FVAFRQMLE 506
            +A++ +LE
Sbjct: 596 ELAYQNLLE 604



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 113/466 (24%), Positives = 198/466 (42%), Gaps = 43/466 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS--QMKKSSPYTSCDNYTY 110
           G P LA ++F ++     V WN +I  F    LP +A+LL+   +MK   P    +  T 
Sbjct: 222 GAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKP----NVITM 277

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYV 169
            SVL ACA+  +L  G+ + C +I         +  N++L+MY  C    DA+ +  K  
Sbjct: 278 VSVLSACAKKIDLEFGRWI-CSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMS 336

Query: 170 EVD-------------YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR- 215
           E D                YD    +FD M  +   AWN ++S Y +  +   A+  F  
Sbjct: 337 EKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHE 396

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYA 274
           M L    +P  ++ +    A + LG   + D  + + V +    +N +  +A+S + MYA
Sbjct: 397 MQLSKDAKPDEVTLICALCASAQLG---AIDFGHWIHVYIKKHDINLNCHLATSLLDMYA 453

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G  + A ++F     ++  VW+ MIG          A++LF  +LE   I  + VTF 
Sbjct: 454 KCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEA-YIKPNAVTFT 512

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           + L A +    ++ G+QL   +   +  +P           +  +  ++  F + GL ++
Sbjct: 513 NILCACNHAGLVNEGEQLFEQMEPLYGIVP----------QIQHYVCVVDIFGRAGLLEK 562

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
               +   +K      +    ALL A S   N ++ +  +  LL       G    L ++
Sbjct: 563 AASFI---EKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNI 619

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           YAK+G  +    + +     D  +  W + I     NG++ E  V 
Sbjct: 620 YAKAGDWEKVSNLRKLMRDSDVKKEPWCSSI---DVNGIVHEFLVG 662



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 22/301 (7%)

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGL--IKTARQ 466
           + V  T +L       N    KQ HA++LR     +    S L+  YA S    +  A+ 
Sbjct: 68  NEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKN 127

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACN 524
           +F  N     +   WN +I GY  +    ++F+ F  ML H+ +  PN  T   +  A +
Sbjct: 128 VF--NQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHML-HSCSEFPNKFTFPFLFKAAS 184

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +  + LG  LHG  I+  L  ++F+  SLI+ Y  SG  + A  VF  +P K+ V++  
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNA 244

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI  +   G+ ++AL LF+ M+   ++P+ IT V+VLSAC+    ++ G  I   ++   
Sbjct: 245 MINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIEN-- 302

Query: 645 KIQPSTEHYC---CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
                TEH      + DM  + G + +A +   ++ E+  V   W ++L      GH++L
Sbjct: 303 --NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIV--SWTTMLD-----GHAKL 353

Query: 702 A 702
            
Sbjct: 354 G 354


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 217/705 (30%), Positives = 369/705 (52%), Gaps = 61/705 (8%)

Query: 137 FSNPSRFVYNSLLNMYSTCL---SSLDAEMV----------GLKYVEVDYSKYDLVC--- 180
           F N +  V++SLL+ +S  L    S+ A+++            K + V YS    +    
Sbjct: 41  FFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRV-YSDLGFLGHAR 99

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VFD          N +++ +++ ++++E  R FRMM    I  ++ + +    A + L 
Sbjct: 100 NVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLL 159

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D +    +    V+ G      L+V SS +    + G    A+K+FD   E++   WN++
Sbjct: 160 DDEVGMEIIRAAVRRGFHL--HLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSI 217

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           IGGYVQ     E+I++F++++    +    VT  + L A  Q     +G   H+Y++   
Sbjct: 218 IGGYVQKGLFWESIQMFLEMIG-GGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALG 276

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   V VL ++++                    R ++SWN MIS +VQNG+  E   L  
Sbjct: 277 MGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFR 336

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI------DM 454
            + + G   DS T+ +L+   S   + + G+  H+ ++R     + +ES+L+      DM
Sbjct: 337 RLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR-----KELESHLVLSTAIVDM 391

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K G IK A  +F +   G ++  TW AM+ G +QNG  E+A   F QM E  V  N V
Sbjct: 392 YSKCGAIKQATIVFGR--MGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSV 449

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA-K 573
           T+ S++  C  +G++  G+ +H   IR+    +  + ++LIDMY+K G I+ A  +F  +
Sbjct: 450 TLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNE 509

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              K+ +   +MI+GYG HG    AL ++  M    ++P+  TFV++L+ACS++GLV+EG
Sbjct: 510 FHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEG 569

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL--GEEGNVLEIWGSLLG 691
             +F  M++++ ++P  +HY C+ D+  R G++ EA E VK++      +VLE   +LL 
Sbjct: 570 KALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLE---ALLS 626

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            CR H ++ +   +A +L+ +D  NS  G +V+LSNIYAE   WE+V+ +R  MR +G++
Sbjct: 627 GCRTHKNTNMGIQIADRLISLDYLNS--GIYVMLSNIYAEARKWESVNYIRGLMRMQGMK 684

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K  G S I+VG  V  F + D  HP    IY++LE L +E+   G
Sbjct: 685 KIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEG 729



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 265/544 (48%), Gaps = 54/544 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD----NYTYSSV 113
           AR +FD  + P T + N +I GF+ N    E   L+  M       SCD    +YT    
Sbjct: 98  ARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMG------SCDIEINSYTCMFA 151

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LKAC +  +  +G  +    +R   +   +V +S++N         DA+           
Sbjct: 152 LKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQ----------- 200

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVFD M  ++VV WN+I+  YV+   + E+++ F  M+  G+RPS ++  N+ 
Sbjct: 201 -------KVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLL 253

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A    G  K     +  ++ LG    ND+FV +S + MY+ LG    A  +FD+   R+
Sbjct: 254 KACGQSGLKKVGMCAHSYVLALGMG--NDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRS 311

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN MI GYVQN    E+  LF ++++     FD  T +S +   SQ  +L+ G+ LH
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGS-GFDSGTLVSLIRGCSQTSDLENGRILH 370

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
           + II+  +   +++  A+++                    ++V++W  M+    QNG  +
Sbjct: 371 SCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAE 430

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           + L L  +MQ++    +SVT+ +L+   ++L +   G+  HA+ +RHG  F+  + S LI
Sbjct: 431 DALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALI 490

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMYAK G I +A ++F  N+   +D    N+MI GY  +G    A   + +M+E  + PN
Sbjct: 491 DMYAKCGKIHSAEKLF-NNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPN 549

Query: 513 VVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
             T  S+L AC+  G +E GK L H     + +         L+D++S++G +  A  + 
Sbjct: 550 QTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELV 609

Query: 572 AKIP 575
            ++P
Sbjct: 610 KQMP 613


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 209/693 (30%), Positives = 347/693 (50%), Gaps = 53/693 (7%)

Query: 144  VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR-NVVAWNTIVSWYV 202
            V N++++MY+ C                    +     VF  +R + +V++WNT++    
Sbjct: 372  VGNAIISMYAKC------------------GFFSAAWTVFRRIRWKCDVISWNTMLGASE 413

Query: 203  KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
              + + + V  F  ML  GI P+ +SF+ +  A S+         ++ L++    +YV  
Sbjct: 414  DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473

Query: 263  LFVASSAIFMYAELGCFDFARKIFDN--CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
              VA+  + MY + G    A  +F       R+   WN M+G Y QN+   EA    +++
Sbjct: 474  -SVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 321  LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI-------------- 366
            L+   ++ D ++F S LS+    QE    Q L   I+++      +              
Sbjct: 533  LQ-GGVLPDALSFTSVLSSCYCSQE---AQVLRMCILESGYRSACLETALISMHGRCREL 588

Query: 367  -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                 V + +   DVVSW  M+SA  +N    E   L   MQ +G + D  T+   L   
Sbjct: 589  EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648

Query: 422  SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
             +     +GK  HA +   G+  +  +E+ L++MY+  G  + A   FE   +  RD  +
Sbjct: 649  LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKA--RDLVS 706

Query: 481  WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
            WN M A Y Q GL +EA + FR M    V P+ +T ++ L        +  GK  HG + 
Sbjct: 707  WNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAA 766

Query: 541  RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
               LD +V V T L+ +Y+K G ++ A ++F    +   V    +I    QHG SE A+ 
Sbjct: 767  ESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVK 826

Query: 601  LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
            +F  M+  G+ PD  T V+++SAC +AG+V+EG   F  M++ + I P+ EHY C  D+L
Sbjct: 827  MFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLL 886

Query: 661  GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
            GR G++  A + ++++  E N L +W SLLG+C+L G +EL E  A+++LE+D  NS   
Sbjct: 887  GRAGQLEHAEQIIRKMPFEDNTL-VWTSLLGTCKLQGDAELGERCAQRILELDPHNSAA- 944

Query: 721  YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
             HV+LSNIY   G W++ D  RK++ ++ ++   G SW+++G  V+ F + D+ HPQ+ +
Sbjct: 945  -HVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDE 1003

Query: 781  IYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
            IY +L++L + MR AG +   +  +DA     E
Sbjct: 1004 IYVVLDKLELLMRRAGYEA--DKGLDAEDELKE 1034



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 156/600 (26%), Positives = 267/600 (44%), Gaps = 63/600 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F  +     V W  +I     +     A  L+  M   S     ++YT  ++L AC
Sbjct: 79  AHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAP-NSYTLVAMLNAC 137

Query: 118 AETRNLRIGKAVHCHF----IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A +R+L IG+++H       +   S  +  V N+++NMY+ C S  DA            
Sbjct: 138 ANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDA------------ 185

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER-YVEAVRQFRMMLRMGIRPSTISFVNV 232
                   VF T+  ++VV+W  +   Y +  R Y +A+R FR ML   + P+ I+F+  
Sbjct: 186 ------IAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITA 239

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +SL D      ++ LL + G  +  D    ++ I MY + G ++ A  +F     R
Sbjct: 240 LGACTSLRD---GTWLHSLLHEAGLGF--DPLAGNALINMYGKCGDWEGAYGVFKAMASR 294

Query: 293 ---NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
              +   WN MI   V+     +A+ +F + L L+ +  + VT ++ L+A++    +D G
Sbjct: 295 QELDLVSWNAMISASVEAGRHGDAMAIFRR-LRLEGMRPNSVTLITILNALAA-SGVDFG 352

Query: 350 --QQLHAYIIKNFVALPVIVLNAVIER---------------------DVVSWNTMISAF 386
             ++ H  I ++     V+V NA+I                       DV+SWNTM+ A 
Sbjct: 353 AARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL--RHGIHF 444
                  + +   + M   G   + V+  A+L+A SN    D G++ H+ +L  R     
Sbjct: 413 EDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVE 472

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L+ MY K G I  A  +F++     R   TWN M+  Y QN   +EAF A  +M
Sbjct: 473 SSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEM 532

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L+  V P+ ++  SVL +C          Q+    I     ++  + T+LI M+ +   +
Sbjct: 533 LQGGVLPDALSFTSVLSSCYCSQE----AQVLRMCILESGYRSACLETALISMHGRCREL 588

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A +VF ++   + V++T M+    ++   +    LFR M+  G+ PD  T    L  C
Sbjct: 589 EQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTC 648



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 228/504 (45%), Gaps = 42/504 (8%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           LF+ +  I MY   G  + A  IF    ERN   W  +I    Q+     A  LF  +L 
Sbjct: 60  LFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLL 119

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI----IKNFVALPVIVLNAVI------ 372
                 +  T ++ L+A +  ++L +G+ +HA I    ++       +V NA+I      
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKC 179

Query: 373 --------------ERDVVSWNTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                         E+DVVSW  M  A+ Q      + L +  EM  Q    + +T    
Sbjct: 180 GSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITA 239

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDS-GD 475
           L A ++LR+   G   H+ L   G+ F+ +  + LI+MY K G  + A  +F+   S  +
Sbjct: 240 LGACTSLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQE 296

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG-NIELGKQ 534
            D  +WNAMI+   + G   +A   FR++    + PN VT+ ++L A    G +    ++
Sbjct: 297 LDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARK 356

Query: 535 LHG--FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            HG  +   YL D  V VG ++I MY+K G  + A  VF +I  K  V     +LG  + 
Sbjct: 357 FHGRIWESGYLRD--VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASED 414

Query: 593 GMS-ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
             S  + ++ F  M   GI+P+ ++F+A+L+ACS +  +D G +I  L+    +    + 
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
               +  M G+ G + EA    KE+      L  W  +LG+   +  ++ ++     L+E
Sbjct: 475 VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALME 531

Query: 712 MDTRNSMP---GYHVLLSNIYAEE 732
           M     +P    +  +LS+ Y  +
Sbjct: 532 MLQGGVLPDALSFTSVLSSCYCSQ 555



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/519 (24%), Positives = 225/519 (43%), Gaps = 77/519 (14%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFI---RCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           +  ++ ++L AC+ +  L  G+ +H   +   R +   S  V   L++MY  C S  +AE
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS--VATMLVSMYGKCGSIAEAE 493

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           +V   + E+              +  R++V WN ++  Y + +R  EA      ML+ G+
Sbjct: 494 LV---FKEM-------------PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P  +SF +V   LSS    + A V+   +++ G        + ++ I M+      + A
Sbjct: 538 LPDALSFTSV---LSSCYCSQEAQVLRMCILESG---YRSACLETALISMHGRCRELEQA 591

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R +FD     +   W  M+    +N    E   LF + ++L+ ++ D  T  + L     
Sbjct: 592 RSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRR-MQLEGVIPDKFTLATTLDTCLD 650

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
              L LG+ +HA + +  +   + V NA++                     RD+VSWN M
Sbjct: 651 STTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
            +A+ Q GL  E ++L   MQ +G   D +T +  L+ +        GK  H      G+
Sbjct: 711 SAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGL 770

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW-----NAMIAGYTQNGLLEE 496
             +  + + L+ +YAK G +  A  +F       R    W     NA+I    Q+G  EE
Sbjct: 771 DSDVSVATGLVKLYAKCGKLDEAISLF-------RGACQWTVVLLNAIIGALAQHGFSEE 823

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS--- 553
           A   F +M +  V P+V T+ S++ AC   G +E G           L    + G S   
Sbjct: 824 AVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG-------CSSFLTMKEYFGISPTL 876

Query: 554 -----LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
                 +D+  ++G + +A  +  K+P E N++ +T+++
Sbjct: 877 EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 121/285 (42%), Gaps = 23/285 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD +     V W  ++     N    E   L+ +M+        D +T ++ L  C
Sbjct: 591 ARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIP--DKFTLATTLDTC 648

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            ++  L +GK +H             V N+LLNMYS C                    + 
Sbjct: 649 LDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNC------------------GDWR 690

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F+TM+ R++V+WN + + Y +     EAV  FR M   G++P  ++F        
Sbjct: 691 EALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSG 750

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                    + +GL  + G +  +D+ VA+  + +YA+ G  D A  +F    +    + 
Sbjct: 751 GSALVSDGKLFHGLAAESGLD--SDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLL 808

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           N +IG   Q+    EA+++F + ++ + +  D  T +S +SA   
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWK-MQQEGVRPDVATLVSIISACGH 852



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 1/137 (0%)

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           + GL+     +    +  +   ++    ++L +C    ++  GK+ H       L+Q++F
Sbjct: 2   KRGLIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLF 61

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGC 608
           +G  LI+MY + G +  A  +F+K+ E+N V++T +I    Q G   RA +LFR+M    
Sbjct: 62  LGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLES 121

Query: 609 GIEPDAITFVAVLSACS 625
              P++ T VA+L+AC+
Sbjct: 122 SAAPNSYTLVAMLNACA 138


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 219/728 (30%), Positives = 361/728 (49%), Gaps = 57/728 (7%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  +     + WN+++ G   NN P +++  + +M  SS     DN + +  + A A  
Sbjct: 130 VFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQA--DNVSLTCAVSASALL 187

Query: 121 RNLRIGKAVHCHFIRC-FSNPSRFVY-NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
             L  G+ +H   I+  + + S   + NSL+++YS C     AE++              
Sbjct: 188 GELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEIL-------------- 233

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALS 237
               F  M+ +++V+WN ++      +R  EA      M  +G ++P +++ V + P  +
Sbjct: 234 ----FKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCA 289

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L   +    V+GL ++   E   D  V +S I MY++      A  +F    ER+   W
Sbjct: 290 ELMLLREGRAVHGLTLR--REMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSW 347

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN H  EA  LF Q+L+         T L+ L +    + L  G+ +H + +
Sbjct: 348 NAMISGYSQNGHSREAQHLFRQLLQ-SYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQL 406

Query: 358 K---------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           K                     + VA   ++       D+V WNT+++   QNG   E L
Sbjct: 407 KLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEAL 466

Query: 397 MLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
                M Q      DSV +  ++SA  NL     G   H   L+  +  +  +++ LI M
Sbjct: 467 KAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITM 526

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y + G I+ AR IF    S +R+  +WN MI+ ++QN     A   F  +      PN +
Sbjct: 527 YGRCGEIENARIIF--GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEI 581

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           TI  +L AC  +G +  GKQ+HG  IR  L  N FV  +L DMYS  G ++ A  +F   
Sbjct: 582 TIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSS 641

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           PE++   + +MI  +G H    +A+ LF  M+ CG  P   TF+++LSACS++GLV+EGL
Sbjct: 642 PERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGL 701

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             +  M + + ++  TEH+ C+ DMLGR G++ EAYEF++++  +     +WG+LL +C 
Sbjct: 702 WYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEP-GVWGALLSACS 760

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
            HG  ++   VA+ L E++  N   GY++ LSN+Y   G W++  ++R+ ++++GL+K  
Sbjct: 761 YHGDLKMGREVAELLFELEPEN--VGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPA 818

Query: 755 GCSWIDVG 762
             S IDVG
Sbjct: 819 AYSLIDVG 826



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 176/714 (24%), Positives = 313/714 (43%), Gaps = 59/714 (8%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           PT  S L+   +      +  LFD I     ++WN +I   V N     A+ L+ ++   
Sbjct: 8   PTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGE 67

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LS 157
                 D+ T   V+ A +   NL  G+ +H    +       F+ N+L++MY+ C  LS
Sbjct: 68  G--VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELS 125

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
           S +                     VF  M  R++++WN+++          +++  F+ M
Sbjct: 126 SSEC--------------------VFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKM 165

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
                +   +S      A + LG+     V++G  +KLG + ++     +S I +Y++  
Sbjct: 166 AYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCR 225

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
               A  +F     ++   WN M+ G   N    EA +L  ++  L  +  D VT +  +
Sbjct: 226 DIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIII 285

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVV 377
              ++L  L  G+ +H   ++  + L   V N++I                    ERD+V
Sbjct: 286 PLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLV 345

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN MIS + QNG   E   L  ++ +        T+ A+L +  +      G+  H + 
Sbjct: 346 SWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQ 405

Query: 438 LRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           L+ G     +  + L+ MY   G +     + +   S   D   WN ++AG TQNG   E
Sbjct: 406 LKLGFANNPLAVNSLMLMYINCGDLVACFSLLQ-TVSAAADIVCWNTVMAGCTQNGHFWE 464

Query: 497 AFVAFRQMLEH-NVTPNVVTIASVLPACNPMGNIEL---GKQLHGFSIRYLLDQNVFVGT 552
           A  AF  M +  +V  + V + +V+ AC   GN+EL   G  LHG +++ L++ ++ V  
Sbjct: 465 ALKAFNLMRQDPDVCHDSVALFNVISAC---GNLELLFAGGSLHGLALKTLMESDIRVQN 521

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +LI MY + G I  A  +F     +N  ++  MI  + Q+    RAL LF  ++    EP
Sbjct: 522 ALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIE---FEP 578

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           + IT V +LSAC+  G++  G QI   + +  ++Q ++     + DM    G++  A++ 
Sbjct: 579 NEITIVGILSACTQLGVLRHGKQIHGHVIRS-RLQGNSFVSAALEDMYSNCGRLDTAFQI 637

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
            +   E    +  W S++ +   H +   A  +  ++ E  TR +   +  LLS
Sbjct: 638 FQSSPERS--VAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLS 689


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 188/572 (32%), Positives = 309/572 (54%), Gaps = 32/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ LL+  G  Y    F+ +  + MY++ G  D A K+FD   +RN   W  MI G  QN
Sbjct: 27  LHALLICAG--YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQN 84

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           +   EAI  F  +    E+      F SA+ A + L  +++G+Q+H   +K  +   + V
Sbjct: 85  SKFSEAIRTFCGMRICGEVP-TQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 368 ----------LNAVIE----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                       A+ +          +D VSW  MI  + + G  +E L+   +M  +  
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTA 464
            ID   + + L A   L+    G+  H+ +++ G     F G  + L DMY+K+G +++A
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG--NALTDMYSKAGDMESA 261

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +F   DS  R+  ++  +I GY +   +E+    F ++    + PN  T +S++ AC 
Sbjct: 262 SNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
               +E G QLH   ++   D++ FV + L+DMY K G++  A   F +I +   + + +
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNS 380

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           ++  +GQHG+ + A+ +F  M   G++P+AITF+++L+ CS+AGLV+EGL  F  M + Y
Sbjct: 381 LVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            + P  EHY CV D+LGR G++ EA EF+  +  E N    W S LG+CR+HG  E+ ++
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG-WCSFLGACRIHGDKEMGKL 499

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+KL++++ +NS  G  VLLSNIYA E  WE+V  VR  MR+  ++K  G SW+DVG  
Sbjct: 500 AAEKLVKLEPKNS--GALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYK 557

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            + F ++D  HP+   IYE L+ L  +++ AG
Sbjct: 558 THVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 589



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 251/522 (48%), Gaps = 61/522 (11%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D    + V++  A+T+ LR GK +H   I     P  F+ N L+NMYS C          
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC---------- 53

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + D   K+FDTM +RN+V+W  ++S   +  ++ EA+R F  M   G  P+
Sbjct: 54  --------GELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F +   A +SLG  +    ++ L +K G    ++LFV S+   MY++ G    A K+
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFG--IGSELFVGSNLEDMYSKCGAMFDACKV 163

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+    ++   W  MI GY +     EA+  F ++++ +E+  D     S L A   L+ 
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKA 222

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMIS 384
              G+ +H+ ++K      + V NA+ +                     R+VVS+  +I 
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +V+    ++GL +  E+++QG   +  T ++L+ A +N    + G Q HA +++  I+F
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK--INF 340

Query: 445 EG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           +    + S L+DMY K GL++ A Q F  ++ GD  +  WN++++ + Q+GL ++A   F
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEQAIQAF--DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIF 398

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG------TSLI 555
            +M++  V PN +T  S+L  C+  G +E      G    Y +D+   V       + +I
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVE-----EGLDYFYSMDKTYGVVPGEEHYSCVI 453

Query: 556 DMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
           D+  ++G +  A     ++P E N+  + + +     HG  E
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 204/456 (44%), Gaps = 73/456 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD++ +   V W  +I G   N+   EAI  +  M+      +   + +SS ++AC
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT--QFAFSSAIRAC 116

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++ +GK +HC  ++       FV ++L +MYS C +  DA                
Sbjct: 117 ASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA---------------- 160

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CKVF+ M  ++ V+W  ++  Y K   + EA+  F+ M+   +        +   A  
Sbjct: 161 --CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACG 218

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
           +L   K    V+  +VKLG E  +D+FV ++   MY++ G  + A  +F    E RN   
Sbjct: 219 ALKACKFGRSVHSSVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS 276

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +  +I GYV+     + + +FV+ L    I  ++ TF S + A +    L+ G QLHA +
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 357 IK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K NF   P +                     + + +   ++WN+++S F Q+GL  + +
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-----------E 445
            +   M  +G   +++T  +LL+  S           HA L+  G+ +            
Sbjct: 396 KIFERMVDRGVKPNAITFISLLTGCS-----------HAGLVEEGLDYFYSMDKTYGVVP 444

Query: 446 GMESY--LIDMYAKSGLIKTARQI-----FEKNDSG 474
           G E Y  +ID+  ++G +K A++      FE N  G
Sbjct: 445 GEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 480



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 6/216 (2%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            +A V+        +  GKQLH   I        F+   L++MYSK G +++A  +F  +
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P++N V++T MI G  Q+     A+  F  M+ CG  P    F + + AC+  G ++ G 
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           Q+  L  + + I         + DM  + G + +A +  +E+  +  V   W +++    
Sbjct: 127 QMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV--SWTAMIDGYS 183

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             G  E A +  KK+++ +        HVL S + A
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQ---HVLCSTLGA 216


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 367/709 (51%), Gaps = 57/709 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y++++ AC+  R+L  G+ VH H +                  ++  SS DA++ G    
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLV------------------ASSSSSPDAQLAG---- 84

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                   ++     TM  RN V+W ++++ +V+  R  +A+  F  MLR G      + 
Sbjct: 85  ------NTVLGNHLITMYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFAL 138

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +   A + LGD  +   V+   +K  SE  +DL V ++ + MY++ G  D    +F+  
Sbjct: 139 GSAVRACTELGDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERI 196

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +++   W ++I G+ Q    +EA+++F +++       ++  F SA  A   +   + G
Sbjct: 197 KDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYG 256

Query: 350 QQLHAYIIKNFVALPVIV---LNAVIER-----------------DVVSWNTMISAFVQN 389
           +Q+H   IK  +   + V   L+ +  R                 D+VSWN++++A+   
Sbjct: 257 EQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVE 316

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           GL  E L+L  EM+  G   D +TV  LL A         G+  H+YL++ G+  +  + 
Sbjct: 317 GLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVC 376

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+ MYA+   + +A  +F  ++  D+D  TWN+++    Q+   EE    F  + +  
Sbjct: 377 NSLLSMYARCSDLSSAMDVF--HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSE 434

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            + + +++ +VL A   +G  E+ KQ+H ++ +  L  +  +  +LID Y+K G ++ A 
Sbjct: 435 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAM 494

Query: 569 NVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
            +F  +     V +++++I+GY Q G ++ A  LF  M+  GI P+ +TF+ VL+ACS  
Sbjct: 495 RLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRV 554

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           G V+EG   + +M+ EY I P+ EH  C+ D+L R GK+ EA  F+ ++  E +++ +W 
Sbjct: 555 GFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDII-MWK 613

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           +LL + ++H   E+ +  A+ +L +D  +S    +VLL NIYA  GNW    +++K MR 
Sbjct: 614 TLLAASKMHNDMEMGKRAAEGILNIDPSHSAA--YVLLCNIYAASGNWNEFARLKKAMRT 671

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            G++K  G SW+ + G +  F  +D+ HP+S +IY MLE + MEM  AG
Sbjct: 672 SGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAG 720



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 269/557 (48%), Gaps = 55/557 (9%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V W ++I   V N    +A+ L+S M +S   T+ D +   S ++AC E  ++  G+ VH
Sbjct: 101 VSWASVIAAHVQNGRAGDALGLFSSMLRSG--TAADQFALGSAVRACTELGDVGTGRQVH 158

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
            H ++        V N+L+ MYS      D  M                  +F+ ++ ++
Sbjct: 159 AHALKSERGSDLIVQNALVTMYSKNGLVDDGFM------------------LFERIKDKD 200

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPALSSLGDYKSADVVY 249
           +++W +I++ + +    +EA++ FR M+  G   P+   F + F A  ++G ++  + ++
Sbjct: 201 LISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIH 260

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           GL +K   +   DL+V  S   MYA     D AR  F      +   WN+++  Y     
Sbjct: 261 GLSIKYRLD--RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGL 318

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ LF ++ +   +  D +T    L A      L  G+ +H+Y++K  +   V V N
Sbjct: 319 LSEALVLFSEMRD-SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 377

Query: 370 AVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           +++                    ++DVV+WN++++A  Q+   +E L L   + K    +
Sbjct: 378 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 437

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIF 468
           D +++  +LSA++ L   ++ KQ HAY  + G+  + M S  LID YAK G +  A ++F
Sbjct: 438 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 497

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E   + +RD  +W+++I GY Q G  +EAF  F +M    + PN VT   VL AC+ +G 
Sbjct: 498 EIMGN-NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 556

Query: 529 IELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTT 584
           +  G   + +SI    Y +       + ++D+ +++G +  AAN   ++P E + + + T
Sbjct: 557 VNEG--CYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKT 614

Query: 585 MILGYGQHG---MSERA 598
           ++     H    M +RA
Sbjct: 615 LLAASKMHNDMEMGKRA 631



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 168/385 (43%), Gaps = 43/385 (11%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           LF+ I     + W +II GF       EA+ ++ +M     +   + + + S  +AC   
Sbjct: 192 LFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHP-NEFHFGSAFRACGAV 250

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
            +   G+ +H   I+   +   +V  SL +MY+ C  +LD+  V    +E          
Sbjct: 251 GSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARC-KNLDSARVAFYRIEAP-------- 301

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
                    ++V+WN+IV+ Y       EA+  F  M   G+RP  I+   +  A     
Sbjct: 302 ---------DLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD 352

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                 +++  LVKLG +   D+ V +S + MYA       A  +F    +++   WN++
Sbjct: 353 ALYHGRLIHSYLVKLGLD--GDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSI 410

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           +    Q+NHP E ++LF  +L   E   D ++  + LSA ++L   ++ +Q+HAY  K  
Sbjct: 411 LTACAQHNHPEEVLKLF-SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAG 469

Query: 361 VALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
           +    ++ N +I+                     RDV SW+++I  + Q G   E   L 
Sbjct: 470 LVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLF 529

Query: 400 YEMQKQGFMIDSVTVTALLSAASNL 424
             M+  G   + VT   +L+A S +
Sbjct: 530 SRMRSLGIRPNHVTFIGVLTACSRV 554



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 183/404 (45%), Gaps = 39/404 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR  F  I  P  V WN+I+  +    L  EA++L+S+M+ S      D  T   +L AC
Sbjct: 291 ARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSG--LRPDGITVRGLLCAC 348

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+ +H + ++   +    V NSLL+MY+ C S L + M              
Sbjct: 349 VGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARC-SDLSSAM-------------- 393

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  ++ ++VV WN+I++   +     E ++ F ++ +       IS  NV  A +
Sbjct: 394 ---DVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASA 450

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV- 296
            LG ++    V+    K G   V+D  ++++ I  YA+ G  D A ++F+  +  N +V 
Sbjct: 451 ELGYFEMVKQVHAYAFKAG--LVDDRMLSNTLIDTYAKCGSLDDAMRLFE-IMGNNRDVF 507

Query: 297 -WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+++I GY Q  +  EA +LF ++  L  I  + VTF+  L+A S++  ++ G   ++ 
Sbjct: 508 SWSSLIVGYAQFGYAKEAFDLFSRMRSLG-IRPNHVTFIGVLTACSRVGFVNEGCYYYSI 566

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +   +  +P         R+  S   ++    + G   E    + +M    F  D +   
Sbjct: 567 MEPEYGIVPT--------REHCS--CIVDLLARAGKLTEAANFIDQMP---FEPDIIMWK 613

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
            LL+A+    + ++GK+    +L            L ++YA SG
Sbjct: 614 TLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASG 657


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 213/700 (30%), Positives = 357/700 (51%), Gaps = 63/700 (9%)

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
           LY +   +S   +C +   +  L ACA   NL     +H   +R        V   L+ +
Sbjct: 4   LYFRPNTTSRARACRDSLLAH-LDACASRANL---AELHGRLVRAHLGSDPCVAGRLVTL 59

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
            ++ +S  D          + Y++     KVFD M +   + WN ++  Y      ++A+
Sbjct: 60  LASPVSRHD----------MPYAR-----KVFDRMAQPTAIVWNCMIRGYNSCHAPMDAL 104

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASS 268
             FR M R G+ P   +   V  + ++   +K   + D V+ L+ ++G  + +DLFV S 
Sbjct: 105 ELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIG--FASDLFVMSG 162

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I  Y      + ARK+F+   ER+   W  MI  + Q       +        LDE+  
Sbjct: 163 LINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLR------SLDEMQS 216

Query: 329 D-----DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
           +      +T +S LSA  Q++ +D G  ++A + +  +   V + NA+I           
Sbjct: 217 EGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSD 276

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     R+  SWNT+I  FVQNG   E L +  EM   G + D +T+ ++LS  + 
Sbjct: 277 AWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQ 336

Query: 424 LRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           L +   G+  H Y+  H IH +  +++ LI+MYAK G +  A  IFE  +   RD  +W 
Sbjct: 337 LGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFE--NMARRDIVSWT 394

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           AM+ GY +      AF  F  M   +V  + + + S+L AC+ +G ++ G+++H +    
Sbjct: 395 AMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEK 454

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            +  ++++ ++L+DMY+K G I+ AA +F+++  K ++ +  MI G    G  + A++LF
Sbjct: 455 SVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKEAVALF 514

Query: 603 RSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
             + K    +PDAIT   VL AC++ G+VDEGL  F+LM     I P  EHY C+ D+LG
Sbjct: 515 EQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDLLG 573

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R G + EAY F++++  + N + IWGSLL +CR+H   EL +++ + ++++   +   G 
Sbjct: 574 RAGLLDEAYNFIQKMPIQPNPV-IWGSLLAACRVHHRMELGKIIGQHIIDLAPNDV--GA 630

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           HVL+SN++AEEG W++V++VR  M  R + K  G S I V
Sbjct: 631 HVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 171/584 (29%), Positives = 288/584 (49%), Gaps = 69/584 (11%)

Query: 40  PTIRSRL-----SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
           P +  RL     S + +   P+ AR++FD + +PT ++WN +I G+   + P +A+ L+ 
Sbjct: 50  PCVAGRLVTLLASPVSRHDMPY-ARKVFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFR 108

Query: 95  QMKKSSPYTSCDNYTYSSVLK---ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            M++S    S DNYT ++V +   A A  +    G AVH    R       FV + L+N 
Sbjct: 109 AMRRSG--VSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINF 166

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
           Y    S  DA                   KVF+ M  R+VV+W  ++S + +  ++   +
Sbjct: 167 YGASKSVEDAR------------------KVFEEMHERDVVSWTLMISAFAQCGQWDNVL 208

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV---VYGLLVKLGSEYVNDLFVASS 268
           R    M   G +P+ I+ +++   LS+ G  ++ D    VY  + + G E   D+ + ++
Sbjct: 209 RSLDEMQSEGTKPNKITIISL---LSACGQVRAVDKGLWVYARVDEYGIE--ADVDIRNA 263

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I MY + GC   A K F     RNT+ WNT+I G+VQN    EA+ +F ++L  D ++ 
Sbjct: 264 LIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLS-DGVIP 322

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
           D +T +S LS  +QL +L  G+ LH YI  + +   +I+ N++I                
Sbjct: 323 DVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF 382

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                RD+VSW  M+  +V+         L  +M+ +  M   + + +LLSA S L   D
Sbjct: 383 ENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALD 442

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            G++ H+Y+    +  +  +ES L+DMYAK G I  A +IF +     +    WNAMI G
Sbjct: 443 KGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRH--KQTLAWNAMIGG 500

Query: 488 YTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD- 545
               G  +EA   F Q+L+  +  P+ +T+  VL AC  +G ++ G  LH F++   L  
Sbjct: 501 LASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEG--LHYFNLMLTLGI 558

Query: 546 --QNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
              N   G  ++D+  ++G+++ A N   K+P + N V + +++
Sbjct: 559 VPDNEHYGC-IVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLL 601



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 178/414 (42%), Gaps = 44/414 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A + F  +    T  WNT+I GFV N    EA+ ++ +M         D  T  SVL   
Sbjct: 277 AWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIP--DVITLVSVLSTY 334

Query: 118 AETRNLRIGKAVHC----HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           A+  +L+ G+ +H     H I C       + NSL+NMY+ C     AE++         
Sbjct: 335 AQLGDLQQGRYLHNYIKDHEIHC----DIILQNSLINMYAKCGDMAAAEII--------- 381

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                    F+ M RR++V+W  +V  YVK  ++  A   F  M    +  S ++ V++ 
Sbjct: 382 ---------FENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLL 432

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A S LG       ++  + +       D+++ S+ + MYA+ GC D A +IF     + 
Sbjct: 433 SACSQLGALDKGREIHSYIKE--KSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQ 490

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
           T  WN MIGG        EA+ LF Q+L+L +   D +T    L A + +  +D G  LH
Sbjct: 491 TLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEG--LH 548

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
            +          ++L   I  D   +  ++    + GL DE    +   QK     + V 
Sbjct: 549 YF---------NLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFI---QKMPIQPNPVI 596

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
             +LL+A       ++GK    +++    +  G    + +++A+ G      Q+
Sbjct: 597 WGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHVLISNLHAEEGQWDDVEQV 650


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 205/623 (32%), Positives = 326/623 (52%), Gaps = 68/623 (10%)

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD---FARKIFD 287
           P+LS L + K   S  +++  ++K G    N  +  S  + +      FD   +A  +F+
Sbjct: 35  PSLSLLHNCKTLQSLRLIHAQMIKTGLHNTN--YALSKLLELCVISPHFDGLPYAISVFE 92

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              E N  +WNTM  G+  ++ PV A++L+V ++ L  ++ +  TF   L + ++ +   
Sbjct: 93  TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFLLKSCAKSKAFK 151

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE---------------------------------- 373
            GQQ+H +++K    L + V  ++I                                   
Sbjct: 152 EGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYA 211

Query: 374 -----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                            +DVVSWN MIS + + G   E L L  EM K     D  T+  
Sbjct: 212 SRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVT 271

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           ++SA +   + ++G+Q H+++  HG      + + L+D+Y+K G ++TA  +FE      
Sbjct: 272 VVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLY-- 329

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D  +WN +I GYT   L +EA + F++ML     PN VT+ S+LPAC  +G I++G+ +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 536 HGFSIRYLLDQN--VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           H +  + L        + TSLIDMY+K G I  A  VF  I  K+  ++  MI G+  HG
Sbjct: 390 HVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            ++ A  +F  M+  GIEPD ITFV +LSACS +G++D G  IF  M Q+YKI P  EHY
Sbjct: 450 RADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHY 509

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ D+LG  G   EA E +  +  E + + IW SLL +C++ G+ EL E  A+ L++++
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINNMEMEPDGV-IWCSLLKACKIRGNVELGESFAQNLIKIE 568

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
             N  PG +VLLSNIYA  G W  V K+R  + ++G++K  GCS I++   V+ F   D+
Sbjct: 569 PEN--PGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP++ +IY MLE + + +  AG
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKAG 649



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 157/640 (24%), Positives = 290/640 (45%), Gaps = 124/640 (19%)

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           PY S  N+   S+L  C   ++LR+   +H   I+   + + +  + LL      L  + 
Sbjct: 27  PYDSLRNHPSLSLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLE-----LCVIS 78

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
               GL Y             VF+T++  N++ WNT+   +  +   V A++ +  M+ +
Sbjct: 79  PHFDGLPYA----------ISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISL 128

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+ P++ +F  +  + +    +K    ++G ++KLG  Y  DLFV +S I +Y + G  +
Sbjct: 129 GLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG--YDLDLFVHTSLISVYVQNGRLE 186

Query: 281 FARKIFDNCLERNT------------------------EV-------WNTMIGGYVQNNH 309
            ARK+FD    R+                         E+       WN MI GY +  +
Sbjct: 187 DARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGN 246

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ELF ++++ + I  D+ T ++ +SA +Q   ++LG+Q+H++I  +     + ++N
Sbjct: 247 YKEALELFKEMMKTN-IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 305

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           ++++                    +DV+SWNT+I  +    L  E L+L  EM + G   
Sbjct: 306 SLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERP 365

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQ 466
           + VT+ ++L A ++L   D+G+  H Y+   L+   +   + + LIDMYAK G I+ A Q
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F  N    +  ++WNAMI G+  +G  + AF  F +M +  + P+ +T   +L AC+  
Sbjct: 426 VF--NSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRS 483

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT----- 581
           G ++LG+                                   ++F  + +   +T     
Sbjct: 484 GMLDLGR-----------------------------------HIFRTMTQDYKITPKLEH 508

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           Y  MI   G  G+ + A  +  +M+   +EPD + + ++L AC   G V+ G       Q
Sbjct: 509 YGCMIDLLGHSGLFKEAEEMINNME---MEPDGVIWCSLLKACKIRGNVELGES---FAQ 562

Query: 642 QEYKIQPSTEH-YCCVADMLGRVGKVVEAYEFVKELGEEG 680
              KI+P     Y  ++++    G+  E  +    L ++G
Sbjct: 563 NLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKG 602



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 258/576 (44%), Gaps = 85/576 (14%)

Query: 44  SRLSKICQ-----EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           S+L ++C      +G P+ A  +F++I  P  +IWNT+  G   ++ P  A+ LY  M  
Sbjct: 69  SKLLELCVISPHFDGLPY-AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                  ++YT+  +LK+CA+++  + G+ +H H ++   +   FV+ SL+++Y      
Sbjct: 128 LGLLP--NSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRL 185

Query: 159 LDAEMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTE 205
            DA  V  +    D   Y  +              K+FD +  ++VV+WN ++S Y +T 
Sbjct: 186 EDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETG 245

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
            Y EA+  F+ M++  IRP   + V V  A +  G  +    V+  +   G  + ++L +
Sbjct: 246 NYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG--FGSNLKI 303

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            +S + +Y++ G  + A  +F+  L ++   WNT+IGGY   N   EA+ LF ++L   E
Sbjct: 304 VNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF----------------------VAL 363
              +DVT LS L A + L  +D+G+ +H YI K                        +  
Sbjct: 364 RP-NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422

Query: 364 PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V N+++ + + SWN MI  F  +G  D    +   M+K G   D +T   LLSA S 
Sbjct: 423 AHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSR 482

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
               D+G+     + +       +E Y  +ID+   SGL K A ++              
Sbjct: 483 SGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI------------- 529

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N M                        + P+ V   S+L AC   GN+ELG+      I+
Sbjct: 530 NNM-----------------------EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIK 566

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            +  +N      L ++Y+ +G  N  A + A + +K
Sbjct: 567 -IEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDK 601


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 307/581 (52%), Gaps = 57/581 (9%)

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           I +Y+  G    AR +FD   + +   W  +I    ++   +EAI+ +      + +  D
Sbjct: 18  IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------- 373
            +  LS   A + L+++   +++H   I+      V++ NA+I+                
Sbjct: 78  KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137

Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
               RDV+SW +M S +V  GL  E L    +M   G   +SVTV+++L A ++L++   
Sbjct: 138 GMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS 197

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR------------ 476
           G++ H +++R+G+     + S L++MYA    I+ A+ +F+     D             
Sbjct: 198 GREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFL 257

Query: 477 ---------------------DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
                                + A+WNA+I G  QNG  E+A     +M      PN +T
Sbjct: 258 NKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQIT 317

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           I SVLPAC  + ++  GKQ+HG+  R+   Q++   T+L+ MY+K G +  +  VF+ + 
Sbjct: 318 ITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMT 377

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           ++++V++ TMI+    HG  E AL LFR M   G+ P+++TF  VLS CS++ LVDEGL 
Sbjct: 378 KRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLL 437

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
           IFD M +++ ++P  +H+ C+ D+L R G++ EAYEF+K++  E      WG+LLG CR+
Sbjct: 438 IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTA-GAWGALLGGCRV 496

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           + + EL  + A +L E+++ N  PG +VLLSNI      W    + RK MR+RG+ K  G
Sbjct: 497 YKNVELGRIAANRLFEIESDN--PGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPG 554

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           CSWI V   V+ F   D+ + QS +IY  L+ +  +MR AG
Sbjct: 555 CSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAG 595



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 142/543 (26%), Positives = 232/543 (42%), Gaps = 92/543 (16%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L ++ +  PP   LK   + S        G    AR LFD I +P    W  +I     +
Sbjct: 2   LSKLPTSLPPHLALKFIKVYS------NSGDLQRARHLFDKIPQPDLPTWTILISALTKH 55

Query: 84  NLPYEAILLYSQMKKSSPYTSC---DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNP 140
               EAI  Y+  +    + +C   D     SV KACA  R++   K VH   IR     
Sbjct: 56  GRSLEAIQYYNDFR----HKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCS 111

Query: 141 SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSW 200
              + N+L++MY  C  S  A +V                  F+ M  R+V++W ++ S 
Sbjct: 112 DVLLGNALIDMYGKCRCSEGARLV------------------FEGMPFRDVISWTSMASC 153

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           YV      EA+  FR M   G RP++++  ++ PA + L D KS   V+G +V+ G    
Sbjct: 154 YVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNG--MG 211

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNT-------------------------- 294
            ++FV+S+ + MYA       A+ +FD+   R+T                          
Sbjct: 212 GNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRM 271

Query: 295 ---------EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
                      WN +IGG +QN    +A+E+  + ++      + +T  S L A + L+ 
Sbjct: 272 MSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSR-MQNSGFKPNQITITSVLPACTNLES 330

Query: 346 LDLGQQLHAYIIKNF--------------------VALPVIVLNAVIERDVVSWNTMISA 385
           L  G+Q+H YI +++                    + L   V + + +RD VSWNTMI A
Sbjct: 331 LRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIA 390

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHF 444
              +G  +E L+L  EM   G   +SVT T +LS  S+ R  D G      + R H +  
Sbjct: 391 TSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEP 450

Query: 445 EG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +    S ++D+ +++G ++ A + F K    +     W A++ G      +E   +A  +
Sbjct: 451 DADHHSCMVDVLSRAGRLEEAYE-FIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANR 509

Query: 504 MLE 506
           + E
Sbjct: 510 LFE 512


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 206/628 (32%), Positives = 328/628 (52%), Gaps = 53/628 (8%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           +K+D   KVF+ M  R++++WN ++S YVK      A   F  M    +    +S+  + 
Sbjct: 105 NKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAML 160

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +  G  + A  ++  ++       N L  A      Y + G  + AR++FD+ ++  
Sbjct: 161 SGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA------YVQNGRIEDARRLFDSKMDWE 214

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN ++GGYV+     +A  LF ++      V D +++   ++  +Q   L   ++L 
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRM-----PVRDKISWNIMITGYAQNGLLSEARRL- 268

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-----FM 408
                 F  LP+        RDV +W  M+S FVQNG+ DE   +  EM ++       M
Sbjct: 269 ------FEELPI--------RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
           I     +  +  A  L +Q   + T ++            + ++  YA+ G I  A+ +F
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSSW------------NTMVTGYAQCGNIDQAKILF 362

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +  +   RD  +W AMI+GY Q+G  EEA   F +M       N   +A  L +C  +  
Sbjct: 363 D--EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +ELGKQLHG  ++         G +L+ MY K G I  A +VF  I EK+ V++ TMI G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y +HG  + AL+LF SMK   I+PD +T V VLSACS+ GLVD+G++ F+ M Q Y I  
Sbjct: 481 YARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA 539

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           + +HY C+ D+LGR G++ EA   +K +    +    WG+LLG+ R+HG +EL E  A+K
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA-ATWGALLGASRIHGDTELGEKAAEK 598

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           + EM+  NS  G +VLLSN+YA  G W  V ++R +MR++G++K  G SW+++    + F
Sbjct: 599 VFEMEPDNS--GMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIF 656

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              D  HP++ +IY  LE L +E++  G
Sbjct: 657 TVGDCSHPEAERIYAYLEELDLELKKDG 684



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/649 (23%), Positives = 287/649 (44%), Gaps = 99/649 (15%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           + +  T T  + +S      +   AR++F+ +     + WN ++ G+V N     A  L+
Sbjct: 86  MRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF 145

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           +QM +       D  +++++L   A+                 F   +R +++ +L    
Sbjct: 146 NQMPEK------DVVSWNAMLSGFAQN---------------GFVEEARKIFDQMLVKNE 184

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
              +       GL    V   + +   ++FD+     +V+WN ++  YV+ +R  +A   
Sbjct: 185 ISWN-------GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F    RM +R   IS+  +    +  G    A  ++  L       + D+F  ++ +  +
Sbjct: 238 FD---RMPVR-DKISWNIMITGYAQNGLLSEARRLFEELP------IRDVFAWTAMVSGF 287

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            + G  D A +IF+   E+N   WN MI GYVQ+    +A ELF Q+   +   ++    
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN---- 343

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
            + ++  +Q   +D  +               I+ + + +RD +SW  MIS + Q+G  +
Sbjct: 344 -TMVTGYAQCGNIDQAK---------------ILFDEMPQRDCISWAAMISGYAQSGQSE 387

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLI 452
           E L L  +M++ G +++   +   LS+ + +   ++GKQ H  L++ G     +  + L+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY K G I+ A  +FE  D  ++D  +WN MIAGY ++G  +EA   F  M +  + P+
Sbjct: 448 AMYGKCGSIEEAFDVFE--DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VT+  VL AC+  G ++ G +                      MY   G+         
Sbjct: 505 DVTLVGVLSACSHTGLVDKGMEYFN------------------SMYQNYGIT-------- 538

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
                N+  YT MI   G+ G  + AL+L +SM      PDA T+ A+L A    G  + 
Sbjct: 539 ----ANAKHYTCMIDLLGRAGRLDEALNLMKSMP---FYPDAATWGALLGASRIHGDTEL 591

Query: 633 GLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           G +     ++ ++++P ++  Y  ++++    G+  E  E   ++ ++G
Sbjct: 592 GEKA---AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 206/470 (43%), Gaps = 65/470 (13%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D+   +  I  Y   G  + A  +F+    R+T  +N MI GY+ NN    A ++F ++
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
            + D I ++ +                    L  Y+    ++    + N + E+DVVSWN
Sbjct: 118 PDRDLISWNVM--------------------LSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGK-------- 431
            M+S F QNG  +E   +  +M     + + ++   LLSA   N R +D  +        
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213

Query: 432 -------------------QTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
                                 +   R  +  +   + +I  YA++GL+  AR++FE  +
Sbjct: 214 EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFE--E 271

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              RD   W AM++G+ QNG+L+EA   F +M E N       IA  + +      IE  
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS----QQIEKA 327

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           ++L       +  +N     +++  Y++ G I+ A  +F ++P+++ +++  MI GY Q 
Sbjct: 328 REL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G SE AL LF  MK  G   +       LS+C+    ++ G Q+   + +    Q     
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIA 442

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
              +  M G+ G + EA++  +++ E+  V   W +++     HG  + A
Sbjct: 443 GNALLAMYGKCGSIEEAFDVFEDITEKDIV--SWNTMIAGYARHGFGKEA 490



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 39/287 (13%)

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
           + +++ D+V WN  ISA+++ G  +  L +   M+++     +VT  A++S   +    D
Sbjct: 53  STIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNKFD 108

Query: 429 VGKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
             ++           FE M        + ++  Y K+G +  AR +F  N   ++D  +W
Sbjct: 109 CARKV----------FEKMPDRDLISWNVMLSGYVKNGNLSAARALF--NQMPEKDVVSW 156

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAM++G+ QNG +EEA   F QML      N ++   +L A    G IE  ++L  F  +
Sbjct: 157 NAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRL--FDSK 210

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             +D  +     L+  Y +   ++ A ++F ++P ++ +++  MI GY Q+G+   A  L
Sbjct: 211 --MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRL 268

Query: 602 FRSMKGCGIEP--DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
           F  +      P  D   + A++S     G++DE  +IF+ M ++ ++
Sbjct: 269 FEEL------PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEV 309



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 32/242 (13%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+ +   L   +P   T +  + ++   Q G    A+ LFD + +   + W  +I G+  
Sbjct: 323 QIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQ 382

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +    EA+ L+ +MK+       +    +  L +CAE   L +GK +H   ++       
Sbjct: 383 SGQSEEALHLFIKMKRDGGI--LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGY 440

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
              N+LL MY  C S  +A              +D    VF+ +  +++V+WNT+++ Y 
Sbjct: 441 IAGNALLAMYGKCGSIEEA--------------FD----VFEDITEKDIVSWNTMIAGYA 482

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     EA+  F  M +M I+P  ++ V V  A S  G           LV  G EY N 
Sbjct: 483 RHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG-----------LVDKGMEYFNS 530

Query: 263 LF 264
           ++
Sbjct: 531 MY 532


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 193/535 (36%), Positives = 294/535 (54%), Gaps = 58/535 (10%)

Query: 282  ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             R IFD   ++N   +N MI  YV NNH      L  + +    I  D  T+   L A S
Sbjct: 1079 TRHIFDEIPKKNVVFFNVMIRSYV-NNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS 1137

Query: 342  QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
              ++L +G Q+HA +++  + L V V N +I                     RDVVSWN+
Sbjct: 1138 GSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNS 1197

Query: 382  MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            +++   +NG  D+ L +  EM+  G   D+ T+ +LL A +N    +V            
Sbjct: 1198 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNV------------ 1245

Query: 442  IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
                   S++ +M+ K                 ++   +WN MIA Y  N +  EA   F
Sbjct: 1246 -------SFVKEMFMKLA---------------NKSLVSWNVMIAVYMNNSMPAEAVDIF 1283

Query: 502  RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
             QM +H V P+ ++IASVLPAC  +  + LG+++H + +R  L  N+ +  +LIDMY+K 
Sbjct: 1284 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC 1343

Query: 562  GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
            G + YA  VF ++  ++ V++T+MI  YG +G    A+SLF  M+  G+ PD+I FV+VL
Sbjct: 1344 GCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVL 1403

Query: 622  SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
            SACS+AGL+DEG   F LM +E KI P  EH+ C+ D+LGR G+V EAY F+K++  E N
Sbjct: 1404 SACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPN 1463

Query: 682  VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
               +WG+LL +CR++ +  +  + A +L ++    S  GY+VLLSNIYA+ G WE+V  V
Sbjct: 1464 E-RVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS--GYYVLLSNIYAKAGRWEDVTTV 1520

Query: 742  RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            R  M+ +G++K  G S  ++   V+ F + DQ HPQS +IYE L+ L  +M+ AG
Sbjct: 1521 RSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAG 1575



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 210/468 (44%), Gaps = 87/468 (18%)

Query: 45   RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
            R   +C  G P   R +FD I +   V +N +I  +V N+L  +A+L++  M        
Sbjct: 1068 RAYAVC--GEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG--ID 1123

Query: 105  CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
             D+YTY  VLKA + + +L +G  +H   +R   + + FV N L++MY  C   ++A   
Sbjct: 1124 PDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEA--- 1180

Query: 165  GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           C+V D M  R+VV+WN++V+   +  ++ +A+   + M  +G++P
Sbjct: 1181 ---------------CRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 1225

Query: 225  STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD---F 281
               +  ++ PA+++                                       C D   F
Sbjct: 1226 DAGTMASLLPAVTNT--------------------------------------CLDNVSF 1247

Query: 282  ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
             +++F     ++   WN MI  Y+ N+ P EA+++F+Q +E   +  D ++  S L A  
Sbjct: 1248 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQ-MEDHAVDPDAISIASVLPACG 1306

Query: 342  QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
             L  L LG+++H Y+++  +   +++ NA+I+                    RDVVSW +
Sbjct: 1307 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 1366

Query: 382  MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            MISA+  NG   + + L   MQ  G   DS+   ++LSA S+    D G+     +    
Sbjct: 1367 MISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC 1426

Query: 442  IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                 +E +  ++D+  ++G +  A   F K    + ++  W A+++ 
Sbjct: 1427 KIVPRIEHFVCMVDLLGRAGQVDEAYG-FIKQMPMEPNERVWGALLSA 1473



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 209/424 (49%), Gaps = 39/424 (9%)

Query: 182  VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
            +FD + ++NVV +N ++  YV    Y +A+  F+ M   GI P   ++  V  A S   D
Sbjct: 1082 IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 1141

Query: 242  YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                  ++  +V++G +   ++FV +  I MY + GC   A ++ D    R+   WN+++
Sbjct: 1142 LWVGMQIHAAVVRVGLDL--NVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLV 1199

Query: 302  GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             G  +N    +A+E+  + +EL  +  D  T  S L AV+     ++     +++ + F+
Sbjct: 1200 AGCARNGQFDDALEV-CKEMELLGLKPDAGTMASLLPAVTNTCLDNV-----SFVKEMFM 1253

Query: 362  ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
             L          + +VSWN MI+ ++ N +  E + +  +M+      D++++ ++L A 
Sbjct: 1254 KL--------ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305

Query: 422  SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
             +L    +G++ H Y++R  +     +E+ LIDMYAK G ++ AR++F++     RD  +
Sbjct: 1306 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF--RDVVS 1363

Query: 481  WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
            W +MI+ Y  NG   +A   F +M +  + P+ +   SVL AC+  G ++ G+    +  
Sbjct: 1364 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR----YYF 1419

Query: 541  RYLLDQNVFVG-----TSLIDMYSKSGVINYAANVFAKIP-EKNS----------VTYTT 584
            + + ++   V        ++D+  ++G ++ A     ++P E N             Y+ 
Sbjct: 1420 KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 1479

Query: 585  MILG 588
            MI+G
Sbjct: 1480 MIIG 1483



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 524  NPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
            NP  +I+  K+LH    I + L  N  +G  L+  Y+  G      ++F +IP+KN V +
Sbjct: 1037 NP--DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFF 1094

Query: 583  TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
              MI  Y  + +   AL +F++M G GI+PD  T+  VL A S +  +  G+QI   +  
Sbjct: 1095 NVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAV-- 1152

Query: 643  EYKIQPSTEHYCCVAD----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
               ++   +    V +    M G+ G +VEA   + Z+     V   W SL+  C  +G 
Sbjct: 1153 ---VRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVV--SWNSLVAGCARNGQ 1207

Query: 699  SELAEVVAKKL 709
             + A  V K++
Sbjct: 1208 FDDALEVCKEM 1218


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 207/763 (27%), Positives = 386/763 (50%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++F+ +     V W ++++G+     P E I +Y  M+       C+  + S V+ +C
Sbjct: 214 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG--VECNENSMSLVISSC 271

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              ++  +G+ +    I+        V NSL++M+                  VDY+ Y 
Sbjct: 272 GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN-------------MGNVDYANY- 317

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +F+ +  R+ ++WN+IV+ Y +     E+ R F +M R     ++ +   +   L 
Sbjct: 318 ----IFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLG 373

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   K    ++GL+VK+G + V  + V ++ + MYA  G  + A  +F     ++   W
Sbjct: 374 DVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISW 431

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+++  +V +   ++A+ +   ++   + V + VTF SAL+A    +  D G+ LH  ++
Sbjct: 432 NSLMASFVNDGRSLDALGILCSMIRTGKSV-NYVTFTSALAACFSPEFFDKGRILHGLVV 490

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            + +    I+ NA++                     RDVV+WN +I  + +N   D+ L 
Sbjct: 491 VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALA 550

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV---GKQTHAYLLRHGIHF-EGMESYLID 453
               ++ +G   + +TV ++LSA   L   D+   GK  HAY++  G    E +++ LI 
Sbjct: 551 AFQTLRVEGVSANYITVVSVLSAC--LVPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 608

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G + +++ +F   D  +R   TWNA++A    +G  EE      +M    ++ + 
Sbjct: 609 MYAKCGDLSSSQDLFNGLD--NRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQ 666

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            + +  L A   +  +E G+QLHG +++   + + F+  +  DMYSK G I     +   
Sbjct: 667 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPP 726

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              ++  ++  +I   G+HG  E     F  M   GI+P  +TFV++L+ACS+ GLVD+G
Sbjct: 727 SVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQG 786

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  +D++ +++ ++P+ EH  CV D+LGR G++ EA  F+ ++  + N L +W SLL SC
Sbjct: 787 LAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASC 845

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           ++H   +     A+ L +++  +      VL SN++A  G WE+V+ VRK+M  + ++K+
Sbjct: 846 KIHRDLDRGRKAAENLSKLEPEDD--SVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 903

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ HPQ+ +IY  LE +   ++ +G
Sbjct: 904 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 946



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 187/714 (26%), Positives = 328/714 (45%), Gaps = 80/714 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD------ 106
           GR   AR LFD +     V WNT++ G V   L  E +  + +M        CD      
Sbjct: 107 GRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKM--------CDLGIKPS 158

Query: 107 NYTYSSVLKACAETRNL-RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           ++  +S++ AC  + ++ R G  VH    +       +V  ++L++Y             
Sbjct: 159 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV----------- 207

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
             Y  V  S+     KVF+ M  RNVV+W +++  Y       E +  ++ M   G+  +
Sbjct: 208 --YGLVSCSR-----KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECN 260

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             S   V  +   L D      + G ++K G E  + L V +S I M+  +G  D+A  I
Sbjct: 261 ENSMSLVISSCGLLKDESLGRQIIGQVIKSGLE--SKLAVENSLISMFGNMGNVDYANYI 318

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL-DEIVFDDVTFLSALSAVSQLQ 344
           F+   ER+T  WN+++  Y QN H  E+  +F  +    DE+  +  T  + LS +  + 
Sbjct: 319 FNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEV--NSTTVSTLLSVLGDVD 376

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
               G+ +H  ++K      V V N ++                     +D++SWN++++
Sbjct: 377 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMA 436

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           +FV +G   + L ++  M + G  ++ VT T+ L+A  +    D G+  H  ++  G+ F
Sbjct: 437 SFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGL-F 495

Query: 445 EG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           +   + + L+ MY K G + T+R++  +     RD   WNA+I GY +N   ++A  AF+
Sbjct: 496 DNQIIGNALVSMYGKIGGMSTSRRVLLQMPR--RDVVAWNALIGGYAENEDPDKALAAFQ 553

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            +    V+ N +T+ SVL AC   G+ +E GK LH + +    + +  V  SLI MY+K 
Sbjct: 554 TLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKC 613

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ + ++F  +  ++ +T+  ++     HG  E  L L   M+  G+  D  +F   L
Sbjct: 614 GDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGL 673

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV----ADMLGRVGKVVEAYEFVKELG 677
           SA +   +++EG Q+  L      ++   E  C +    ADM  + G++ E    VK L 
Sbjct: 674 SAAAKLAVLEEGQQLHGL-----AVKLGFELDCFIFNAAADMYSKCGEIGEV---VKMLP 725

Query: 678 EEGN-VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
              N  L  W  L+ +   HG+ E       ++LEM  +   PG+   +S + A
Sbjct: 726 PSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIK---PGHVTFVSLLTA 776



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 159/631 (25%), Positives = 309/631 (48%), Gaps = 69/631 (10%)

Query: 100 SPYTSC-DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
           +P  SC D   +S + +   ET     G+A+H   ++     S    N+L+NMY+     
Sbjct: 57  NPELSCFDQTGFSQITR---ET----TGRALHALCVKGLVRLSVLHTNTLINMYT----- 104

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                   K+  V  ++Y     +FD M  RN V+WNT++S  V+   Y+E +  F+ M 
Sbjct: 105 --------KFGRVKPARY-----LFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMC 151

Query: 219 RMGIRPSTISFVNVFPALSSLGD-YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
            +GI+PS+    ++  A    G  ++    V+G + K G   ++D++V+++ + +Y   G
Sbjct: 152 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSG--LLSDVYVSTAILHLYGVYG 209

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
               +RK+F+   +RN   W +++ GY     P E I+++ + +  + +  ++ +    +
Sbjct: 210 LVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY-KSMRGEGVECNENSMSLVI 268

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVV 377
           S+   L++  LG+Q+   +IK+ +   + V N++I                    ERD +
Sbjct: 269 SSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTI 328

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN++++A+ QNG  +E   +   M++    ++S TV+ LLS   ++ +Q  G+  H  +
Sbjct: 329 SWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLV 388

Query: 438 LRHGIHFEGME---SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           ++ G  F+ +    + L+ MYA +G  + A  +F++  +  +D  +WN+++A +  +G  
Sbjct: 389 VKMG--FDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT--KDLISWNSLMASFVNDGRS 444

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            +A      M+    + N VT  S L AC      + G+ LHG  +   L  N  +G +L
Sbjct: 445 LDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNAL 504

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           + MY K G ++ +  V  ++P ++ V +  +I GY ++   ++AL+ F++++  G+  + 
Sbjct: 505 VSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANY 564

Query: 615 ITFVAVLSACSYAG-LVDEGLQIFDLMQQEYKIQP---STEHY-CCVADMLGRVGKVVEA 669
           IT V+VLSAC   G L++ G  +       Y +     S EH    +  M  + G +  +
Sbjct: 565 ITVVSVLSACLVPGDLLERGKPL-----HAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 619

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            +     G +   +  W ++L +   HGH E
Sbjct: 620 QDLFN--GLDNRSIITWNAILAANAHHGHGE 648


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 196/573 (34%), Positives = 306/573 (53%), Gaps = 56/573 (9%)

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           E G   +AR++FD   +    +WNTMI GY + NHP   + +++ +L    I  D  TF 
Sbjct: 53  ESGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLA-SNIKPDRFTFP 111

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER-------------------- 374
             L   ++   L  G+ L  + +K+     + V  A I                      
Sbjct: 112 FLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAW 171

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           +VV+WN M+S + +     +  ML  EM+K+G   +SVT+  +LSA S L++ + GK  +
Sbjct: 172 EVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIY 231

Query: 435 AYLLRHGIHFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGD----------------- 475
            Y+   GI    +  E+ LIDM+A  G +  A+ +F+   + D                 
Sbjct: 232 KYI-NGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQI 290

Query: 476 ------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
                       RD  +W AMI GY +     EA   FR+M   NV P+  T+ S+L AC
Sbjct: 291 DLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTAC 350

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             +G +ELG+ +  +  +  +  + FVG +LIDMY K G +  A  VF ++  K+  T+T
Sbjct: 351 AHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWT 410

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI+G   +G  E AL++F +M    I PD IT++ VL AC++AG+V++G   F  M  +
Sbjct: 411 AMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQ 470

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           + I+P+  HY C+ D+LGR G++ EA+E +  +  + N + +WGSLLG+CR+H + +LAE
Sbjct: 471 HGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSI-VWGSLLGACRVHKNVQLAE 529

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           + AK++LE++  N     +VLL NIYA    WEN+ +VRK M ERG++K  GCS +++ G
Sbjct: 530 MAAKQILELEPENG--AVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNG 587

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V  F + DQ HPQS +IY  LE +  ++  AG
Sbjct: 588 NVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAG 620



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 237/563 (42%), Gaps = 107/563 (19%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKIC---QEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QIHS +  +     P  + R+   C   + G+   ARQ+FD+I +PT  IWNT+I G
Sbjct: 22  QLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKG 81

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +   N P   + +Y  M  S+     D +T+  +LK       L+ GK +  H ++   +
Sbjct: 82  YSRINHPQNGVSMYLLMLASN--IKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            + FV  + ++M+S C                     DL  KVFD      VV WN ++S
Sbjct: 140 SNLFVQKAFIHMFSLC------------------RLVDLARKVFDMGDAWEVVTWNIMLS 181

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY----GLLVKL 255
            Y + +++ ++   F  M + G+ P++++ V +  A S L D +    +Y    G +V+ 
Sbjct: 182 GYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVER 241

Query: 256 GSEYVN---DLFVA----------------------SSAIFMYAELGCFDFARKIFDNCL 290
                N   D+F A                      +S +  +A +G  D ARK FD   
Sbjct: 242 NLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIP 301

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ER+   W  MI GY++ N  +EA+ LF + +++  +  D+ T +S L+A + L  L+LG+
Sbjct: 302 ERDYVSWTAMIDGYLRMNRFIEALALFRE-MQMSNVKPDEFTMVSILTACAHLGALELGE 360

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            +  YI KN +     V NA+I+                    +D  +W  MI     NG
Sbjct: 361 WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAING 420

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
             +E L +   M +     D +T   +L A            THA ++  G      +S+
Sbjct: 421 HGEEALAMFSNMIEASITPDEITYIGVLCAC-----------THAGMVEKG------QSF 463

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
            I M  + G+                    +  M+    + G LEEA      M    V 
Sbjct: 464 FISMTMQHGIKPNVTH--------------YGCMVDLLGRAGRLEEAHEVIVNM---PVK 506

Query: 511 PNVVTIASVLPACNPMGNIELGK 533
           PN +   S+L AC    N++L +
Sbjct: 507 PNSIVWGSLLGACRVHKNVQLAE 529



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/424 (22%), Positives = 192/424 (45%), Gaps = 31/424 (7%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR++FD       V WN ++ G+       ++ +L+ +M+K     S ++ T   +L A
Sbjct: 160 LARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRG--VSPNSVTLVLMLSA 217

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKYVEV--- 171
           C++ ++L  GK ++ +        +  + N L++M++ C    +A+ V   +K  +V   
Sbjct: 218 CSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISW 277

Query: 172 --------DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                   +  + DL  K FD +  R+ V+W  ++  Y++  R++EA+  FR M    ++
Sbjct: 278 TSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVK 337

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   + V++  A + LG  +  + V   + K  +   ND FV ++ I MY + G    A+
Sbjct: 338 PDEFTMVSILTACAHLGALELGEWVKTYIDK--NSIKNDTFVGNALIDMYFKCGNVGKAK 395

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K+F     ++   W  MI G   N H  EA+ +F  ++E   I  D++T++  L A +  
Sbjct: 396 KVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEAS-ITPDEITYIGVLCACTHA 454

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             ++ GQ         F+++    +   I+ +V  +  M+    + G  +E   ++  M 
Sbjct: 455 GMVEKGQSF-------FISM---TMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMP 504

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
            +    +S+   +LL A    +N  + +     +L        +   L ++YA     + 
Sbjct: 505 VKP---NSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWEN 561

Query: 464 ARQI 467
            RQ+
Sbjct: 562 LRQV 565



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM--YSKSGVINYAANVFAKIP 575
           S+L  C  M  +   KQ+H  +I+  L  +      +I      +SG + YA  VF  IP
Sbjct: 12  SLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +     + TMI GY +    +  +S++  M    I+PD  TF  +L  
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKG 116


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 208/689 (30%), Positives = 350/689 (50%), Gaps = 48/689 (6%)

Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
            HC   +       +V N++L  YS C S                   +L CK+FD M  
Sbjct: 21  THCQAFKSGIISHIYVANNILFRYSKCFSG----------------DLNLACKLFDEMPH 64

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           ++ V WNT+++ YV++     A    + M R G +    +F ++   ++    +     V
Sbjct: 65  KDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQV 124

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L+VK+G  Y   ++  S+ + MYA+    + A  +F     RN   WN +I G+VQ  
Sbjct: 125 HSLIVKIG--YEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVG 182

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
               A  L +  ++ + +  +D TF   L+ +   +   L  QLH  IIK+ +     + 
Sbjct: 183 DRDTAFWL-LDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALC 241

Query: 369 NAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           NA +                      RD+V+WN+M+ A++ +  D++   L  EMQ  GF
Sbjct: 242 NATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGF 301

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK--SGLIKTA 464
             D  T T ++SA     +++ GK  HA +++ G+     + + LI MY K  +  ++ A
Sbjct: 302 EPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAA 361

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +F    S DR   +WN+++ G++Q G  E+A   F  M       +    ++VL +C+
Sbjct: 362 LNLFHSMKSKDR--VSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCS 419

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +  ++LG+Q+H  +++   D N FV +SLI MYSK G+I  A   F    +++S+T+ +
Sbjct: 420 DLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNS 479

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           ++  Y QHG  + AL LF  M+   ++ D +TFVAVL+ACS+ GLV++G  +   M+ +Y
Sbjct: 480 IMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDY 539

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            I P  EHY C  D+ GR G + EA   +  +  + N + +  +LLG+CR  G+ ELA  
Sbjct: 540 GIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAM-VLKTLLGACRACGNIELAAQ 598

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           VA +LLE++        +V+LSN+Y     W++   V + MRER ++K  G SWI+V   
Sbjct: 599 VASQLLEVEPEEHCT--YVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNE 656

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           V+ F ++D+ HP S  +Y++L  L  EM+
Sbjct: 657 VHAFKAEDRSHPYSEDVYQILGELMEEMK 685



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 286/649 (44%), Gaps = 93/649 (14%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           R SK C  G  +LA +LFD +    TV WNT+I G+V +     A      MK+      
Sbjct: 43  RYSK-CFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRG--FQ 99

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            D YT+ S+LK  A      +G+ VH   ++     S +  ++LL+MY+ C    DA   
Sbjct: 100 ADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDA--- 156

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                      YD    VF  M  RN V+WN ++  +V+      A      M + G+R 
Sbjct: 157 -----------YD----VFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
              +F  +   L     YK    ++  ++K G E+ N L   ++ +  Y+E G  + A++
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNAL--CNATLTAYSECGLLEDAKR 259

Query: 285 IFDNCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVS 341
           +FD  +  R+   WN+M+  Y+ ++   +A  LF   LE+    F  D  T+   +SA  
Sbjct: 260 VFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLF---LEMQGFGFEPDIYTYTCVISACF 316

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------ERDVVSW 379
                + G+  HA +IK  +   V + NA+I                       +D VSW
Sbjct: 317 AAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSW 376

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N++++ F Q G  ++ L L   M+     ID    +A+L + S+L    +G+Q H   ++
Sbjct: 377 NSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVK 436

Query: 440 HGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G    + + S LI MY+K G+I+ A + FE  D+      TWN+++  Y Q+G  + A 
Sbjct: 437 TGFDSNDFVASSLIFMYSKCGIIEDAWKCFE--DTTKESSITWNSIMFAYAQHGQGDVAL 494

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             F  M E  V  + VT  +VL AC+ +G +E G+ +                  L  M 
Sbjct: 495 DLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCV------------------LKSME 536

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           S  G           IP +    Y   +  +G+ G  E A +L  SM     +P+A+   
Sbjct: 537 SDYG-----------IPPRME-HYACAVDLFGRAGYLEEAKALIDSMP---FQPNAMVLK 581

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH--YCCVADMLGRVGK 665
            +L AC   G ++   Q+     Q  +++P  EH  Y  +++M G + +
Sbjct: 582 TLLGACRACGNIELAAQV---ASQLLEVEPE-EHCTYVILSNMYGHLKR 626


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 301/609 (49%), Gaps = 99/609 (16%)

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           PS +      P   +L    +A VV GL          D FVASS +  Y  LG    AR
Sbjct: 24  PSALKSCPAQPLARAL---HAAAVVSGL--------AEDPFVASSLLHSYIRLGATGAAR 72

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD   E+N   W+ +I GY        A  L  Q+                       
Sbjct: 73  SVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMR---------------------- 110

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
                                    +A +E +V++WN ++S   ++G   + +  +  M 
Sbjct: 111 -------------------------SAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMH 145

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIK 462
            +GF  D+  V+  LSA  +++   VGKQ H Y+++ G   +  + + LIDMY K G   
Sbjct: 146 SEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRAD 205

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ------------------- 503
              ++F  ++S   D A+ NA++AG ++N  + EA + FR+                   
Sbjct: 206 EIVRVF--HESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVAC 263

Query: 504 ----------------MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
                           M    V PN VTI  VLPA   +  +  G+  H FS+R     +
Sbjct: 264 CVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHD 323

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           V+VG++L+DMY+K G   +A  +F  +P +N V++  MI GY  HG +  A+ LF SM+ 
Sbjct: 324 VYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQK 383

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
           C  +PD +TF  VL ACS AGL +EG + F+ MQQ + I P  EHY C+  +LGR GK+ 
Sbjct: 384 CKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLD 443

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSN 727
           EAY+ + E+  E +   IWGSLLGSCR++G+  LAEV A+KL +++  N+  G +VLLSN
Sbjct: 444 EAYDLINEMPFEPDSC-IWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNA--GNYVLLSN 500

Query: 728 IYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLER 787
           IYA +  W+ V++VR EM+  GL+KE GCSWI++   V+   + D  HP    I E L +
Sbjct: 501 IYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQ 560

Query: 788 LAMEMRNAG 796
           L +EM   G
Sbjct: 561 LTIEMNRLG 569



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 187/449 (41%), Gaps = 101/449 (22%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV--------- 232
           VFD M  +NVV W+ +++ Y        A      M   G+ P+ I++  +         
Sbjct: 74  VFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGR 133

Query: 233 ----------------FP-------ALSSLGDYKSADV---VYGLLVKLGSEYVNDLFVA 266
                           FP       ALS++GD K   V   V+G +VK G     D  V 
Sbjct: 134 ALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRL--DACVV 191

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ I MY + G  D   ++F      +    N ++ G  +N    EA+ LF         
Sbjct: 192 TALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLF--------- 242

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
                                          + F+   V       E +VVSW ++++  
Sbjct: 243 -------------------------------REFICRGV-------ELNVVSWTSIVACC 264

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFE 445
           VQNG D E + L   MQ  G   +SVT+  +L A +N+     G+  H + LR G +H  
Sbjct: 265 VQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDV 324

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + S L+DMYAK G  + AR IF+   S  R+  +WNAMI GY  +G    A   F  M 
Sbjct: 325 YVGSALVDMYAKCGKARHARTIFDAMPS--RNVVSWNAMIGGYAMHGDAANAVQLFCSMQ 382

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGK-------QLHGFSIRYLLDQNVFVGTSLIDMY 558
           +    P++VT   VL AC+  G  E G+       Q HG S R  ++        ++ + 
Sbjct: 383 KCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPR--MEHY----ACMVTLL 436

Query: 559 SKSGVINYAANVFAKIP-EKNSVTYTTMI 586
            +SG ++ A ++  ++P E +S  + +++
Sbjct: 437 GRSGKLDEAYDLINEMPFEPDSCIWGSLL 465



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 30/316 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           L  Q+  +   P  + WN ++ G   +    +A+    +M     +   D    S  L A
Sbjct: 105 LLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFP--DATGVSCALSA 162

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC-----------------LSSL 159
             + + + +GK VH + ++        V  +L++MY  C                 ++S 
Sbjct: 163 VGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASC 222

Query: 160 DAEMVGL----KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           +A + GL    +  E      + +C+  +     NVV+W +IV+  V+  R +EAV  FR
Sbjct: 223 NALVAGLSRNAQVSEALLLFREFICRGVEL----NVVSWTSIVACCVQNGRDLEAVDLFR 278

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            M  +G+ P++++   V PA +++         +   ++ G  +++D++V S+ + MYA+
Sbjct: 279 TMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKG--FLHDVYVGSALVDMYAK 336

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G    AR IFD    RN   WN MIGGY  +     A++LF  + +  +   D VTF  
Sbjct: 337 CGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKP-DLVTFTC 395

Query: 336 ALSAVSQLQELDLGQQ 351
            L A SQ    + G++
Sbjct: 396 VLGACSQAGLTEEGRR 411



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 39/289 (13%)

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           L SA  +   Q + +  HA  +  G+  +  + S L+  Y + G    AR +F++    +
Sbjct: 23  LPSALKSCPAQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP--E 80

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT-------------------- 515
           ++   W+A+IAGY+  G  E A+    QM    V PNV+T                    
Sbjct: 81  KNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTA 140

Query: 516 ---------------IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
                          ++  L A   +  + +GKQ+HG+ ++     +  V T+LIDMY K
Sbjct: 141 LVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGK 200

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G  +    VF +    +  +   ++ G  ++     AL LFR     G+E + +++ ++
Sbjct: 201 CGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSI 260

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           ++ C   G   E + +F  MQ    ++P++    CV      V  ++  
Sbjct: 261 VACCVQNGRDLEAVDLFRTMQS-IGVEPNSVTIPCVLPAFANVAALMHG 308



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 9/165 (5%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+   + S L +C       L + LH  ++   L ++ FV +SL+  Y + G    A +V
Sbjct: 18  PDPHLLPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSV 74

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           F ++PEKN V ++ +I GY   G +E A  L   M+  G+EP+ IT+  ++S  + +G  
Sbjct: 75  FDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRA 134

Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLG-----RVGKVVEAY 670
            + +     M  E    P      C    +G      VGK V  Y
Sbjct: 135 LDAVTALVRMHSE-GFFPDATGVSCALSAVGDVKEVSVGKQVHGY 178



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 31/193 (16%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V W +I+   V N    EA+ L+  M+  S     ++ T   VL A A    L  G++ H
Sbjct: 255 VSWTSIVACCVQNGRDLEAVDLFRTMQ--SIGVEPNSVTIPCVLPAFANVAALMHGRSAH 312

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
           C  +R       +V ++L++MY+ C  +  A                    +FD M  RN
Sbjct: 313 CFSLRKGFLHDVYVGSALVDMYAKCGKARHAR------------------TIFDAMPSRN 354

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           VV+WN ++  Y        AV+ F  M +   +P  ++F  V  A S  G          
Sbjct: 355 VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG---------- 404

Query: 251 LLVKLGSEYVNDL 263
            L + G  Y N++
Sbjct: 405 -LTEEGRRYFNEM 416


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 207/650 (31%), Positives = 348/650 (53%), Gaps = 34/650 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           VF  M  RN+ +WN +V  Y K   + EA+  + RM+   G++P   +F  V      + 
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+  +V+ G E   D+ V ++ I MY + G    AR +FD    R+   WN M
Sbjct: 211 DLARGREVHVHVVRYGYEL--DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY +N    E ++LF  +  L  +  D +T  S +SA   L +  LG+ +HAY+I   
Sbjct: 269 ISGYFENGMGHEGLKLFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
            A+ + V N++ +                    +D+VSW TMIS +  N L ++ +    
Sbjct: 328 FAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYR 387

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESYLIDMYAKSG 459
            M +     D +TV A+LSA + L + D G + H   ++   I +  + + LI+MY+K  
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I  A  IF  ++   ++  +W ++IAG   N    EA + FRQM +  + PN +T+ + 
Sbjct: 448 CIDKALDIF--HNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAA 504

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G +  GK++H   +R  +  + F+  +L+DMY + G +N A N F    +K+ 
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDV 563

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            ++  ++ GY + G     + LF  M    + PD ITF+++L  C  + +V +GL  F  
Sbjct: 564 SSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSK 623

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M+ EY + P+ +HY CV D+LGR G++ EA++F++++    +   +WG+LL +CR+H + 
Sbjct: 624 ME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP-AVWGALLNACRIHHNI 681

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L E+ A+++ E+D      GY++LL N+YA+ G W  V KVR+ M+E GL  + GCSW+
Sbjct: 682 DLGELSAQRIFELD--KGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG-NKTIQNSNVDAT 808
           +V G V+ F S D+ HPQ+ +I  +L+    +M   G   + ++S++D T
Sbjct: 740 EVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDET 789



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 207/399 (51%), Gaps = 25/399 (6%)

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF--MYAELGCFDFARKIFDN 288
           +VF AL  L ++K A      +  +    +N L V     F  M+   G    A  +F  
Sbjct: 95  DVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGK 154

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERN   WN ++GGY +  +  EAI L+ ++L +  +  D  TF   L     + +L  
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+++H ++++    L + V+NA+I                     RD++SWN MIS + +
Sbjct: 215 GREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           NG+  EGL L + M+      D +T+T+++SA   L ++ +G+  HAY++  G   +  +
Sbjct: 275 NGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L  MY  +G  + A ++F + D   +D  +W  MI+GY  N L E+A   +R M + 
Sbjct: 335 CNSLTQMYLYAGSWREAEKLFSRMDC--KDIVSWTTMISGYEYNFLPEKAIDTYRMMDQD 392

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           +V P+ +T+A+VL AC  +G+++ G +LH  +I+  L   V V  +LI+MYSK   I+ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
            ++F  IP KN +++T++I G   +     AL  FR MK
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK 491



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 245/539 (45%), Gaps = 47/539 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F  ++      WN ++ G+       EAI LY +M         D YT+  VL+ C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP-DVYTFPCVLRTC 206

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +L  G+ VH H +R        V N+L+ MY  C     A +              
Sbjct: 207 GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL-------------- 252

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M RR++++WN ++S Y +     E ++ F  M  + + P  ++  +V  A  
Sbjct: 253 ----LFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LGD +    ++  ++  G  +  D+ V +S   MY   G +  A K+F     ++   W
Sbjct: 309 LLGDRRLGRDIHAYVITTG--FAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSW 366

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            TMI GY  N  P +AI+ + ++++ D +  D++T  + LSA + L +LD G +LH   I
Sbjct: 367 TTMISGYEYNFLPEKAIDTY-RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K  +   VIV N +I                     ++V+SW ++I+    N    E L+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYA 456
              +M K     +++T+TA L+A + +     GK+ HA++LR G+  +  + + L+DMY 
Sbjct: 486 FFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYV 544

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +  A   F   +S  +D ++WN ++ GY++ G        F +M++  V P+ +T 
Sbjct: 545 RCGRMNIAWNQF---NSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITF 601

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            S+L  C     +  G         Y +  N+     ++D+  ++G +  A     K+P
Sbjct: 602 ISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 184/359 (51%), Gaps = 25/359 (6%)

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G   N    EA++L   + EL   V +DV F++ +      +  + G ++++  + +  +
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDV-FVALVRLCEWKRAHEEGSKVYSVALSSMNS 126

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
           L V + NA +                    ER++ SWN ++  + + G  DE + L + M
Sbjct: 127 LSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM 186

Query: 403 -QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
               G   D  T   +L     + +   G++ H +++R+G   +  + + LI MY K G 
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGD 246

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +K+AR +F++     RD  +WNAMI+GY +NG+  E    F  M   +V P+++T+ SV+
Sbjct: 247 VKSARLLFDRMPR--RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +G+  LG+ +H + I      ++ V  SL  MY  +G    A  +F+++  K+ V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           ++TTMI GY  + + E+A+  +R M    ++PD IT  AVLSAC+  G +D G+++  L
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 212/460 (46%), Gaps = 69/460 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LFD + R   + WN +I G+  N + +E + L+  M+  S     D  T +SV+ AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLS--VDPDLMTLTSVISAC 307

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               + R+G+ +H + I         V NSL  MY    S  +AE               
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAE--------------- 352

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+F  M  +++V+W T++S Y       +A+  +RMM +  ++P  I+   V  A +
Sbjct: 353 ---KLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACA 409

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +LGD  +   ++ L +K  +  ++ + VA++ I MY++  C D A  IF N   +N   W
Sbjct: 410 TLGDLDTGVELHKLAIK--ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467

Query: 298 NTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
            ++I G   NN   EA+  F Q+ + L     + +T  +AL+A +++  L  G+++HA++
Sbjct: 468 TSIIAGLRLNNRCFEALIFFRQMKMTLQP---NAITLTAALAACARIGALMCGKEIHAHV 524

Query: 357 IKNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           ++  V L   + NA+++                   +DV SWN +++ + + G     + 
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVE 584

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY------ 450
           L   M K     D +T  +LL           GK   + ++R G+ +F  ME Y      
Sbjct: 585 LFDRMVKARVRPDEITFISLLCGC--------GK---SQMVRQGLMYFSKMEEYGVTPNL 633

Query: 451 -----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
                ++D+  ++G ++ A +  +K      D A W A++
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTP-DPAVWGALL 672


>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
 gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
          Length = 549

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 169/426 (39%), Positives = 263/426 (61%), Gaps = 10/426 (2%)

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V + +IERDVVSWNT++    + G   E L+LV +M ++GF  DS T++++L   +   +
Sbjct: 127 VFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECAD 186

Query: 427 QDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              G + H + +R+G     F G  S LIDMYA       + ++F+  +   RD   WN+
Sbjct: 187 VKRGSEVHGFAVRNGFDNDVFVG--SSLIDMYANCTRTDYSVKVFD--NLPVRDPILWNS 242

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           ++AG  QNG +EEA   FR+ML+  V P  VT +S++P C  + ++  GKQLH + IR  
Sbjct: 243 VLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGG 302

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + NVF+ +SLIDMY K G I+ A ++F ++   + V++T MI+GY  HG +  AL LF 
Sbjct: 303 FEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFE 362

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+    +P+ ITF+AVL+ACS+AGLVD+G + F  M   Y I P+ EH   +AD+LGR 
Sbjct: 363 RMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRA 422

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EAY F+ ++ +      +W +LL +CR+H ++ LAE VAKK++E++ R+   G HV
Sbjct: 423 GELDEAYNFISKM-QIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSI--GSHV 479

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           +LSN+Y+  G W     +RK MR++G++K+  CSWI+V   ++ F + D+ HP   +   
Sbjct: 480 VLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVFVAHDRSHPCCIECST 539

Query: 784 MLERLA 789
           + E LA
Sbjct: 540 LSEHLA 545



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 229/513 (44%), Gaps = 61/513 (11%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           +AI L+ +M+  +   S    +  + LK+CA      +G ++H   IR  +   RF  N+
Sbjct: 32  DAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANA 91

Query: 148 LLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL--VCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           LLN+Y   L        G+  V    S   L  V KVFD M  R+VV+WNT+V    +  
Sbjct: 92  LLNLYCK-LPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEG 150

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
           R+ EA+   R M R G RP + +  +V P  +   D K    V+G  V+ G  + ND+FV
Sbjct: 151 RHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNG--FDNDVFV 208

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            SS I MYA     D++ K+FDN   R+  +WN+++ G  QN    EA+ +F ++L+   
Sbjct: 209 GSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTG- 267

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------------- 366
           +    VTF S +     L  L  G+QLHAY+I+       F++  +I             
Sbjct: 268 VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAH 327

Query: 367 -VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            + + +   DVVSW  MI  +  +G   E L+L   M+      + +T  A+L+A S   
Sbjct: 328 HIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS--- 384

Query: 426 NQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
                   HA L+  G        Y   M    G++ T        D            I
Sbjct: 385 --------HAGLVDKGW------KYFKSMSDHYGIVPTLEHCAALAD------------I 418

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
            G  + G L+EA+    +M    + P     +++L AC    N  L +++    I  L  
Sbjct: 419 LG--RAGELDEAYNFISKM---QIKPTASVWSTLLRACRVHKNTMLAEEV-AKKIMELEP 472

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +++     L +MYS SG  N AA++   + +K 
Sbjct: 473 RSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKG 505



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 193/421 (45%), Gaps = 43/421 (10%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WNT+++G       +EA++L  +M +       D++T SSVL   A
Sbjct: 125 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRP--DSFTLSSVLPIFA 182

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  +++ G  VH   +R   +   FV +SL++MY+ C                DYS    
Sbjct: 183 ECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANC-------------TRTDYS---- 225

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD +  R+ + WN++++   +     EA+  FR ML+ G+RP  ++F ++ P   +
Sbjct: 226 -VKVFDNLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGN 284

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L   +    ++  +++ G E  +++F++SS I MY + G    A  IFD     +   W 
Sbjct: 285 LASLRFGKQLHAYVIRGGFE--DNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWT 342

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  +    EA+ LF + +EL     + +TFL+ L+A S    +D G +    +  
Sbjct: 343 AMIMGYALHGPAREALVLF-ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSD 401

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
           ++  +P +   A +  D++          + G  DE    + +MQ +     +   + LL
Sbjct: 402 HYGIVPTLEHCAALA-DILG---------RAGELDEAYNFISKMQIKP---TASVWSTLL 448

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG-------LIKTARQIFEKN 471
            A    +N  + ++    ++       G    L +MY+ SG       L K+ R+   K 
Sbjct: 449 RACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKK 508

Query: 472 D 472
           D
Sbjct: 509 D 509



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 32/261 (12%)

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV--TIASVLPACNPMGNIELGKQLHG 537
           +W   I      G   +A   F +M       + V  ++ + L +C  +G   LG  LH 
Sbjct: 16  SWAHQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLHA 75

Query: 538 FSIRYLLDQNVFVGTSLIDMYSK--------SGVINYAAN-----------VFAKIPEKN 578
            +IR     + F   +L+++Y K        +GV +               VF ++ E++
Sbjct: 76  LAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIERD 135

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V++ T++LG  + G    AL L R M   G  PD+ T  +VL   +    V  G ++  
Sbjct: 136 VVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEV-- 193

Query: 639 LMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
                + ++   ++   V     DM     +   + +    L     +L  W S+L  C 
Sbjct: 194 ---HGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPIL--WNSVLAGCA 248

Query: 695 LHGHSELAEVVAKKLLEMDTR 715
            +G  E A  + +++L+   R
Sbjct: 249 QNGSVEEALGIFRRMLQTGVR 269



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A  +FD +  P  V W  +I+G+  +    EA++L+ +M+  +     ++ T
Sbjct: 318 CKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKP--NHIT 375

Query: 110 YSSVLKACAET 120
           + +VL AC+  
Sbjct: 376 FLAVLTACSHA 386


>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 323/593 (54%), Gaps = 55/593 (9%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           + ++G E   D      A    + LG   +A KIF+   + +  V+N M+  Y +     
Sbjct: 166 IFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILR 225

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           + + LF Q+ E D +  D  T+   L A+  L+++  G+++  +I+K  + L   V N++
Sbjct: 226 KVLLLFQQLRE-DGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSL 284

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-MID 410
           I+                    RD VSWN MIS +V+    ++ +    EMQ++G    D
Sbjct: 285 IDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPD 344

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE- 469
             TV + LSA + L+N ++G + H Y+ +       +++ L+DMYAK G +  AR IF+ 
Sbjct: 345 EATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDE 404

Query: 470 ---KN------------DSGD-------------RDQATWNAMIAGYTQNGLLEEAFVAF 501
              KN            + GD             RD   W AMI GY Q    ++A   F
Sbjct: 405 MSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALF 464

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           R+M    V P+  T+ ++L  C  +G +E GK +HG+     +  +V VGT+LI+MYSK 
Sbjct: 465 REMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKC 524

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ +  +F ++ +K++ ++T++I G   +G +  AL LF  M+  G +PD ITF+ VL
Sbjct: 525 GCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVL 584

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACS+ GLV+EG + F+ M++ ++I+P  EHY CV D+LGR G + EA E ++E+  E  
Sbjct: 585 SACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENC 644

Query: 682 --VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
             V+ ++G+LL +CR+H + ++ E +AKKL  +++ +S    H LL+NIYA    WE+  
Sbjct: 645 EIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS--SIHTLLANIYASVDRWEDAK 702

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           KVR++M+E G++K  GCS I+V G V+ F   D  HP+  +I  ML R+  ++
Sbjct: 703 KVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/571 (23%), Positives = 245/571 (42%), Gaps = 116/571 (20%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQE---GRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QI S    I         ++L   C +   G    A ++F+ +  P+  ++N ++  
Sbjct: 158 QLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKM 217

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +    +  + +LL+ Q+++   +   D +TY  VLKA    R++R G+ V    ++   +
Sbjct: 218 YAKRGILRKVLLLFQQLREDGLWP--DGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 275

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +VYNSL++MY                   + S  +   K+FD M  R+ V+WN ++S
Sbjct: 276 LDNYVYNSLIDMY------------------YELSNVENAKKLFDEMTTRDSVSWNVMIS 317

Query: 200 WYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            YV+  R+ +A+  FR M + G  +P   + V+   A ++L + +  D ++  + K   E
Sbjct: 318 GYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK---E 374

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFD------------------NCLE--------- 291
                 + ++ + MYA+ GC + AR IFD                  NC +         
Sbjct: 375 LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 434

Query: 292 ----RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+  +W  MI GYVQ +H  +A+ LF + +++  +  D  T ++ L+  +QL  L+
Sbjct: 435 KSPVRDVVLWTAMINGYVQFHHFDDAVALFRE-MQIQRVKPDKFTVVTLLTGCAQLGALE 493

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+ +H Y+ +N + + V+V  A+IE                    +D  SW ++I    
Sbjct: 494 QGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 553

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            NG   E L L  EM++ G   D +T   +LSA S                 HG      
Sbjct: 554 MNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------------HG------ 590

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQM 504
                      GL++  R+ F       R +     +  +I    + GLL+EA    +++
Sbjct: 591 -----------GLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 639

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
              N    V    ++L AC    N+++G++L
Sbjct: 640 PIENCEIVVPLYGALLSACRIHNNVDMGERL 670



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 143/286 (50%), Gaps = 10/286 (3%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL--IKTAR 465
           I  +T  + +    N ++ D  KQ  + + R G+  +    + L+   A S L  ++ A 
Sbjct: 138 ISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAE 197

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           +IF  N   D     +N M+  Y + G+L +  + F+Q+ E  + P+  T   VL A   
Sbjct: 198 KIF--NYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGC 255

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           + ++  G+++ GF ++  +D + +V  SLIDMY +   +  A  +F ++  ++SV++  M
Sbjct: 256 LRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM 315

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIE-PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           I GY +    E A++ FR M+  G E PD  T V+ LSAC+    ++ G +I + +++E 
Sbjct: 316 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKEL 375

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
                 ++   + DM  + G +  A     E+  + NV+  W S++
Sbjct: 376 GFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVI-CWTSMI 417


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 211/719 (29%), Positives = 358/719 (49%), Gaps = 49/719 (6%)

Query: 101  PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSS 158
            P+   D+Y Y+ +L+ C    + R G+AVH H +R    +    F  N LLNMY+     
Sbjct: 422  PWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTK---- 477

Query: 159  LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                 VG          +    +VFD +  RN+V++ T+V  +     + EA   F+ + 
Sbjct: 478  -----VG---------PFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523

Query: 219  RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
              G   +      V   + ++     A  V+    KLG +   + FV S+ I  Y+  G 
Sbjct: 524  WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHD--RNAFVGSALIDAYSMCGV 581

Query: 279  FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
               AR++FD  + ++   W  M+  Y +N+ P   +++F + + +     +     S L 
Sbjct: 582  VSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSK-MRVAVSKLNPFALTSVLR 640

Query: 339  AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
            A   L  + LG+ +HA  +K        V  A+++                     DV+ 
Sbjct: 641  AAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVIL 700

Query: 379  WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
            W+ MIS + Q   +++   L   M +     +  +++++L A +N+   D+GKQ H + +
Sbjct: 701  WSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI 760

Query: 439  RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
            + G   E  + + LID+YAK   ++++ +IF  +   D ++ +WN +I GY+++G  E A
Sbjct: 761  KIGHESELFVGNALIDLYAKCSDMESSLEIF--SSLRDVNEVSWNTIIVGYSKSGFGEAA 818

Query: 498  FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
               FR+M   +V    VT +SVL AC    +I    Q+H    +   + +  V  SLID 
Sbjct: 819  LSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDS 878

Query: 558  YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
            Y+K G I  A  +F  + E + V++  +I GY  HG +  A  LF  M    I+ + ITF
Sbjct: 879  YAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITF 938

Query: 618  VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            VA+LS C   GLV +GL +FD M+ ++ I+PS EHY C+  +LGR G++ +A  F+ ++ 
Sbjct: 939  VALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIP 998

Query: 678  EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
               + + +W +LL SC +H + EL    A+K+LE++ ++     +VLLSN+Y+  G+ + 
Sbjct: 999  SAPSAM-VWRALLSSCIVHKNVELGRFSAEKVLEIEPQDET--TYVLLSNMYSAAGSLDQ 1055

Query: 738  VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V   RK MR  G+RKE G SW+++ G V+ F+   ++HP    I  MLE L ++    G
Sbjct: 1056 VAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREG 1114



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 196/431 (45%), Gaps = 49/431 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     V W  ++  +  N+ P   + ++S+M+ +   +  + +  +SVL+A 
Sbjct: 585 ARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA--VSKLNPFALTSVLRAA 642

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               ++ +GK +H   ++   +  R VY +LL+MY+ C +  DA +              
Sbjct: 643 VCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARL-------------- 688

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F+ +   +V+ W+ ++S Y +  +  +A   F  M+R  + P+  S  +V  A +
Sbjct: 689 ----AFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACA 744

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++        ++   +K+G E  ++LFV ++ I +YA+    + + +IF +  + N   W
Sbjct: 745 NMPLLDLGKQIHNHAIKIGHE--SELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSW 802

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT+I GY ++     A+ +F + +    +    VT+ S L A +    ++   Q+H  I 
Sbjct: 803 NTIIVGYSKSGFGEAALSVFRE-MRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIE 861

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K+      IV N++I                    E D+VSWN +IS +  +G       
Sbjct: 862 KSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQE 921

Query: 398 LVYEMQKQGFMIDSVTVTALLS--AASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LID 453
           L   M K     + +T  ALLS   ++ L +Q +     +  L HGI    ME Y  ++ 
Sbjct: 922 LFDMMSKNSIKANDITFVALLSVCGSTGLVSQGL-SLFDSMRLDHGIE-PSMEHYTCIVR 979

Query: 454 MYAKSGLIKTA 464
           +  ++G +  A
Sbjct: 980 LLGRAGRLNDA 990


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 219/724 (30%), Positives = 366/724 (50%), Gaps = 54/724 (7%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  +    T  WN+++ G + N L   +   + +M +SS     D  + S VL AC+  
Sbjct: 221 VFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSS--FQADEVSLSCVLSACSHL 278

Query: 121 RNL-RIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           ++L   G++VH   I+  + + +  V NSL+  Y        AE                
Sbjct: 279 KDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE---------------- 322

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VF +   +N+V WN ++   V+ +R  EA+  F+ M R   +P   + V +  A   
Sbjct: 323 --EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGD 379

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
            G       V+G ++K G  Y  +  V +S + +Y +      AR +F     R+   WN
Sbjct: 380 HGLLPEGKEVHGYIIKKGHIY-EECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWN 438

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           TMI GY +N+   E  +   + L  + +     T ++ + +    Q+L+ G+ +H++I+K
Sbjct: 439 TMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK 498

Query: 359 NFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLM 397
                 V   N++I                       D++SWNT I   VQNGL  + L 
Sbjct: 499 YGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALE 558

Query: 398 LVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
               M        DS+T+ ++LS   NL+ Q +GK  H   L+  I F   +++ L+ MY
Sbjct: 559 AFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMY 618

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            + G  ++A  IF  +    R+  +WN MI+G+ QN     AF  +++M   +  PN ++
Sbjct: 619 FRFGDTESAELIF--SSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKM--EDFEPNEIS 674

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           I  ++ AC  +G++  GK +HG  +R+ L  NVF+  SL+DMYSK G ++ +  VF    
Sbjct: 675 IVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSA 734

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           EK+   + +MI  +G HG+  +++ +F  M   G++    TF+A+LSACS++GL DEGL+
Sbjct: 735 EKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLK 794

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            + LM + + I P+ EH+ CV DMLGR G++ EA++FV+ L  +     +WG+LL +C  
Sbjct: 795 YYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSK-QAHGVWGALLSACSK 853

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
               ++ E VAK LL ++  NS  GY+V +SN+YA +  W    +VR  ++++GL K  G
Sbjct: 854 KSELKMCESVAKHLLCLEPENS--GYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRG 911

Query: 756 CSWI 759
            S I
Sbjct: 912 RSII 915



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 176/695 (25%), Positives = 317/695 (45%), Gaps = 65/695 (9%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L PP+ +    T  SR+  +C       A Q+FD    P  ++WN  I     N    +A
Sbjct: 96  LDPPV-RTSVITAYSRVRDVCS------ALQVFDEAAAPDLILWNAAISALTLNCRYGDA 148

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           ++L+  M         D+ +   +L   +  R+L  G A H   ++   +    ++N+L+
Sbjct: 149 VVLFRWMVDVLGVI--DSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLM 206

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           +MY+ C     +E+                  VF  M  R+  +WN++VS  +       
Sbjct: 207 DMYAKCGDFYSSEV------------------VFQRMPYRDTTSWNSMVSGSLFNGLAEI 248

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGD-YKSADVVYGLLVKLGSEYVNDLFVASS 268
           +   F+ M+R   +   +S   V  A S L D +   + V+  ++KLG E      VA+S
Sbjct: 249 SAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTS-SVANS 307

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I  Y ELG  + A ++F +   +N   WN MI G V+N+   EA+ +F ++   ++   
Sbjct: 308 LITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQP-- 365

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIK---------------------NFVALPVIV 367
           D  T ++ +SA      L  G+++H YIIK                     N  +   I+
Sbjct: 366 DVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARIL 425

Query: 368 LNAVIERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
              +  RD++SWNTMIS + +N  L +E   +   +  +G      TV A++ +    ++
Sbjct: 426 FRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQD 485

Query: 427 QDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
            + GK  H+++L++G    G+ +   LI MY   G    A  + E + +   D  +WN  
Sbjct: 486 LNFGKSVHSFILKYGF-LTGVSAANSLIHMYICCGDSLAAFSLLE-SITPISDIISWNTA 543

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           I G  QNGL  +A  AF Q +   +T  P+ +T+ SVL  C  +    LGK +H  +++ 
Sbjct: 544 IVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKR 602

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           L++ N+ V  +L+ MY + G    A  +F+ +  +N  ++  MI G+ Q+    RA   +
Sbjct: 603 LIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFY 662

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
           + M+    EP+ I+ V ++ AC+  G + +G  I   + + + +Q +      + DM  +
Sbjct: 663 KKME--DFEPNEISIVGIICACTQLGDLRQGKNIHGHVVR-FGLQTNVFISASLVDMYSK 719

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
            G++  +    +   E+   +  W S++ +   HG
Sbjct: 720 CGRLDISIRVFESSAEKS--IACWNSMISAFGFHG 752



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 30/408 (7%)

Query: 243 KSADVVYGL-LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           + AD V  L    L S  V D  V +S I  Y+ +     A ++FD     +  +WN  I
Sbjct: 77  EEADGVAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAI 136

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
                N    +A+ LF  ++++  ++ D  + +  LS  S+ + L+ G   H   +K  +
Sbjct: 137 SALTLNCRYGDAVVLFRWMVDVLGVI-DSTSMVIMLSGASRARSLEHGIAFHGMALKRCL 195

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + + N +++                    RD  SWN+M+S  + NGL +       E
Sbjct: 196 DTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIH--FEGMESYLIDMYAKS 458
           M +  F  D V+++ +LSA S+L++    G+  H+ +++ G       + + LI  Y + 
Sbjct: 256 MVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYEL 315

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G  + A ++F    + +++  TWNAMI G  +N  + EA   F++M   N  P+V T+ +
Sbjct: 316 GFPEAAEEVFLS--TSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVT 372

Query: 519 VLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ++ AC   G +  GK++HG+ I+   + +   VG SL+D+Y K    + A  +F  +P +
Sbjct: 373 IISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMR 432

Query: 578 NSVTYTTMILGYGQH-GMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + +++ TMI GY ++  + E A ++F+ +   G+     T VAV+ +C
Sbjct: 433 DLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSC 480



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 156/309 (50%), Gaps = 27/309 (8%)

Query: 58  ARQLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  L +SIT  + +I WNT I+G V N L  +A+  + Q   S+   + D+ T  SVL  
Sbjct: 524 AFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSV 582

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   +   +GK++HC  ++     +  V N+LL MY     +  AE+             
Sbjct: 583 CGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAEL------------- 629

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPA 235
                +F ++  RN+ +WN ++S + +     E +R F+   +M    P+ IS V +  A
Sbjct: 630 -----IFSSLVGRNLCSWNCMISGFAQNN---EGLRAFQFYKKMEDFEPNEISIVGIICA 681

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            + LGD +    ++G +V+ G +   ++F+++S + MY++ G  D + ++F++  E++  
Sbjct: 682 CTQLGDLRQGKNIHGHVVRFGLQ--TNVFISASLVDMYSKCGRLDISIRVFESSAEKSIA 739

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+MI  +  +   +++IE+F + +    +     TF++ LSA S     D G + +  
Sbjct: 740 CWNSMISAFGFHGLGLKSIEIFWK-MNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHL 798

Query: 356 IIKNFVALP 364
           +I++F  +P
Sbjct: 799 MIEHFGIIP 807



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A  +F S+       WN +I GF  NN    A   Y +M+   P    +  +   
Sbjct: 622 GDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMEDFEP----NEISIVG 677

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ AC +  +LR GK +H H +R     + F+  SL++MYS C                 
Sbjct: 678 IICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKC----------------- 720

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + D+  +VF++   +++  WN+++S +      ++++  F  M   G++ +  +F+ +
Sbjct: 721 -GRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIAL 779

Query: 233 FPALSSLGDYKSADVVYGLLVK 254
             A S  G        Y L+++
Sbjct: 780 LSACSHSGLTDEGLKYYHLMIE 801


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 282/487 (57%), Gaps = 31/487 (6%)

Query: 333 FLSALSAVSQLQELDLGQQLHA--------------------YIIKNFVALPVIVLNAVI 372
           + S L +    + ++ G+QLHA                    Y I N +    ++ + + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           +R++  WN MI  +  NG  +  + L Y+M+  G + D  T   +L A S L   + GK+
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 433 THAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            H  ++R G+    F G  + LIDMYAK G +++ARQ+F+K D  +RD   WN+M+A Y+
Sbjct: 124 IHKDVIRSGLESDVFVG--AALIDMYAKCGCVESARQVFDKID--ERDVVCWNSMLATYS 179

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           QNG  +E+    R M  + + P   T    + A    G +  GK+LHG+S R+  + N  
Sbjct: 180 QNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDK 239

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V T+L+DMY+KSG +N A ++F  + EK  V++  MI GY  HG +  AL LF+ MKG  
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKG-K 298

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           + PD ITFV VL+ACS+ GL++EG   F  M  ++ I P+ +HY C+ D+LG  G++ EA
Sbjct: 299 VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
           Y+ + E+  E +   +WG+LL SC++HG+ E+ E+  +KL+E++  +   G +V+LSN+Y
Sbjct: 359 YKLIMEMRVEPDA-GVWGALLHSCKIHGNVEMGELALEKLVELEPDDG--GNYVILSNMY 415

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A+ G W+ V ++R  M  +GL+K + CSWI+VG  V+ F S+D  HP+S  IY  L+R  
Sbjct: 416 AQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTG 475

Query: 790 MEMRNAG 796
             M+ AG
Sbjct: 476 KLMKEAG 482



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 198/445 (44%), Gaps = 78/445 (17%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+S+L++C   + +  GK +H    +   + +  +   L+N+Y  C S  +A ++     
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLL----- 58

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                        FD + +RN+  WN ++  Y     Y  A+  +  M   G+ P   +F
Sbjct: 59  -------------FDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTF 105

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  A S+L   +    ++  +++ G E  +D+FV ++ I MYA+ GC + AR++FD  
Sbjct: 106 PFVLKACSALSAMEEGKKIHKDVIRSGLE--SDVFVGAALIDMYAKCGCVESARQVFDKI 163

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+   WN+M+  Y QN  P E++ L  +V+  + +   + TF+ +++A +    L  G
Sbjct: 164 DERDVVCWNSMLATYSQNGQPDESLAL-CRVMAFNGLKPTEGTFVISIAASADNGLLPQG 222

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           ++LH Y  ++       V  A++                    E+ VVSWN MI+ +  +
Sbjct: 223 KELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMH 282

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGME 448
           G  +E L L  EM+ +  + D +T   +L+A S           H  LL  G +HF  M 
Sbjct: 283 GHANEALDLFKEMKGK-VLPDHITFVGVLAACS-----------HGGLLNEGKMHFRSMI 330

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S          +  T +               +  MI      G LEE   A++ ++E  
Sbjct: 331 SDF-------NIWPTVQH--------------YTCMIDLLGHCGRLEE---AYKLIMEMR 366

Query: 509 VTPNVVTIASVLPACNPMGNIELGK 533
           V P+     ++L +C   GN+E+G+
Sbjct: 367 VEPDAGVWGALLHSCKIHGNVEMGE 391



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 185/403 (45%), Gaps = 39/403 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  LFD I++    +WN +I G+  N  PYE AI LY QM+        D +T+  VLKA
Sbjct: 55  AHLLFDRISKRNLFLWNVMIRGYAWNG-PYELAISLYYQMRDYGLVP--DKFTFPFVLKA 111

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C+    +  GK +H   IR       FV  +L++MY+ C     A               
Sbjct: 112 CSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESAR-------------- 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VFD +  R+VV WN++++ Y +  +  E++   R+M   G++P+  +FV    A 
Sbjct: 158 ----QVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAAS 213

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +  G       ++G   + G E  ND  V ++ + MYA+ G  + AR +F+   E+    
Sbjct: 214 ADNGLLPQGKELHGYSWRHGFE-SNDK-VKTALMDMYAKSGSVNVARSLFELLEEKRVVS 271

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN MI GY  + H  EA++LF ++    +++ D +TF+  L+A S    L+ G+     +
Sbjct: 272 WNAMITGYAMHGHANEALDLFKEM--KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
           I +F   P           V  +  MI      G  +E   L+ EM+ +    D+    A
Sbjct: 330 ISDFNIWPT----------VQHYTCMIDLLGHCGRLEEAYKLIMEMRVEP---DAGVWGA 376

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LL +     N ++G+     L+       G    L +MYA++G
Sbjct: 377 LLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 13/140 (9%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGF 80
           PQ  ++H  S          +++ L  +  + G  ++AR LF+ +     V WN +I G+
Sbjct: 220 PQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGY 279

Query: 81  VCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
             +    EA+ L+ +MK K  P    D+ T+  VL AC+    L  GK    HF    S+
Sbjct: 280 AMHGHANEALDLFKEMKGKVLP----DHITFVGVLAACSHGGLLNEGKM---HFRSMISD 332

Query: 140 ----PSRFVYNSLLNMYSTC 155
               P+   Y  ++++   C
Sbjct: 333 FNIWPTVQHYTCMIDLLGHC 352


>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
 gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 204/632 (32%), Positives = 336/632 (53%), Gaps = 48/632 (7%)

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           ++NTI+S    T    +A+     MLR G +RP  ++F       +  G+      ++ L
Sbjct: 117 SYNTILS---ATPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHAL 173

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH-P 310
             + G     D+FV ++ +  Y+  G  D ARK+F+    R+   WN ++ G  Q+    
Sbjct: 174 ASRAG--IATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECS 231

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            E I +F+++L+  ++  D ++  S + A     +L+LG+Q+H + +K  V   V + N 
Sbjct: 232 AEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANV 291

Query: 371 VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQGFMI 409
           ++                    ERDV+SW T++S      +D E  + ++  M++ G   
Sbjct: 292 LVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS------MDGEDAVSLFNGMRRDGVAP 345

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIF 468
           + VT  A+LS+         G+  HA  L+  +  +   +  LI MYAK   +  AR IF
Sbjct: 346 NEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIF 405

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                   +   WNA+I+GY QN + ++A  AF  M++  + PN  T AS+L A   +  
Sbjct: 406 SLMP--HSEIIAWNALISGYAQNEMCQDALEAFLAMMK-IMKPNETTFASILSAVTAVET 462

Query: 529 IEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           + +  G+  H  +++  L  + +V  +LIDMY+K G +  +   F +   ++ + +T +I
Sbjct: 463 VSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAII 522

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
               +HG  +  +SLF  M G G+ PD +  ++VL+AC Y+G V  G +IFD M  ++  
Sbjct: 523 SANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGA 582

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           +   EHY CV DMLGR G++ EA E + ++   G  +    SLLG+CR+HG++++ E VA
Sbjct: 583 ELWPEHYACVVDMLGRAGRLEEAEELMLQM-PSGPSVSALQSLLGACRIHGNTDVGERVA 641

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG--- 763
             L E +   S  G +VLLSNIYAE+G+W  V +VR++MRERG++KEVG SW+D GG   
Sbjct: 642 SVLTETEPTES--GAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVGFSWVDAGGAGD 699

Query: 764 --YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
             ++ +F+S D  HPQS +IY + E L  EM+
Sbjct: 700 SLHLYKFSSDDTTHPQSEEIYRVAEGLGWEMK 731



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 193/431 (44%), Gaps = 39/431 (9%)

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T  +NT++        P +A+    ++L   ++  D VTF   LS  +   E  L +QL
Sbjct: 114 DTRSYNTILSA---TPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQL 170

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG-L 391
           HA   +  +A  V V NA++                     RD+VSWN ++    Q+G  
Sbjct: 171 HALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGEC 230

Query: 392 DDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
             E + +   M KQG    D ++V +++ A       ++G+Q H + ++ G+     + +
Sbjct: 231 SAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIAN 290

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ MY K G    AR++FE    G+RD  +W  ++   + +G  E+A   F  M    V
Sbjct: 291 VLVAMYYKCGTPGCARRLFEF--MGERDVISWTTVM---SMDG--EDAVSLFNGMRRDGV 343

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN VT  ++L +         G+ +H   ++  L        SLI MY+K   ++ A  
Sbjct: 344 APNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARM 403

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           +F+ +P    + +  +I GY Q+ M + AL  F +M    ++P+  TF ++LSA +    
Sbjct: 404 IFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKI-MKPNETTFASILSAVTAVET 462

Query: 630 VDEGL-QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE-GNVLEIWG 687
           V     Q++     +  +  S      + DM  + G + E++   K  GE     L  W 
Sbjct: 463 VSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESW---KAFGETVHRSLIAWT 519

Query: 688 SLLGSCRLHGH 698
           +++ +   HG+
Sbjct: 520 AIISANSKHGN 530



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 138/308 (44%), Gaps = 43/308 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  AR+LF+ +     + W T++     +    +A+ L++ M++     + +  T+ +
Sbjct: 300 GTPGCARRLFEFMGERDVISWTTVM-----SMDGEDAVSLFNGMRRDG--VAPNEVTFVA 352

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L +       R G+ +H   ++   +      NSL+ MY+      DA M         
Sbjct: 353 MLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARM--------- 403

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F  M    ++AWN ++S Y + E   +A+  F  M+++ ++P+  +F ++
Sbjct: 404 ---------IFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMMKI-MKPNETTFASI 453

Query: 233 FPALSSLGDYKSADVVYGLL-----VKLG---SEYVNDLFVASSAIFMYAELGCFDFARK 284
             A++++   ++  + YG +     +KLG   SEYV+        I MYA+ G  + + K
Sbjct: 454 LSAVTAV---ETVSMAYGQMYHCQALKLGLGASEYVSGAL-----IDMYAKRGSLEESWK 505

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F   + R+   W  +I    ++ +    + LF  ++    +  D V  LS L+A     
Sbjct: 506 AFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVG-SGVAPDGVVLLSVLTACRYSG 564

Query: 345 ELDLGQQL 352
            + LG+++
Sbjct: 565 FVSLGREI 572


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 230/726 (31%), Positives = 370/726 (50%), Gaps = 61/726 (8%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD--NYTYSSVLKA 116
           R   D   R + V WNT I G V N      + ++  M + S   +C+  ++TYS VL A
Sbjct: 128 RAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDMVRGS---TCEPNSFTYSGVLSA 184

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    L +G+AVH   +R  S    FV  S++NMY  C   + A M             
Sbjct: 185 CAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKC-GQMGAAM------------- 230

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                 F  M  RNVV+W T ++ +V+ E  V A+     MLR G+  +  +  ++  A 
Sbjct: 231 ----NEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLAC 286

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERNTE 295
           S     + A+ V+G+++K  SE   D  V  + I  YA  G      K+F       N  
Sbjct: 287 SQTSMIREANQVHGMIIK--SELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVSNRS 344

Query: 296 VWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           +W+  I G   + H V+ +I+L  ++L    +  +D  + S  S+V   +   LG+QLH 
Sbjct: 345 IWSAFISGV--SRHSVQRSIQLLRRML-FQCLRPNDKCYASVFSSVDSSE---LGRQLHP 398

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
            +IK+     V+V +A+                     E+D VSW +MI+ F  +G   E
Sbjct: 399 LVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVE 458

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
              ++  M  +GF  + V+++A+LSA +       GK+ H ++LR       +   L+ M
Sbjct: 459 AFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSINHCLVSM 518

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y+K   ++TAR++F+      +DQ   ++MI+GY  NG  EEA   F+ ML      +  
Sbjct: 519 YSKCKDLQTARKLFDATPC--KDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHIDRF 576

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
             +S++  C  M     GK LHG++ +  +  ++ V +SL+ +YSKSG ++ +  VF ++
Sbjct: 577 LCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVFDEL 636

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
              + VT+T +I GY QHG S+ AL+LF  M  CG++PD +  V+VLSAC   GLV+EG 
Sbjct: 637 DVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVEEGF 696

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           + F+ M+  Y ++P   HYCC+ D+LGR G++VEA  F++ +  + N + +W +LL +CR
Sbjct: 697 KHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSM-VWSTLLAACR 755

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +H    L   V  K+ E    N   G    +SNI A  G+WE V ++RK +++  + KE 
Sbjct: 756 VHDDVVLGRFVENKIHE---ENCDSGCFATMSNIRANSGDWEGVMEIRKSVKD--VEKEP 810

Query: 755 GCSWID 760
           G S+++
Sbjct: 811 GWSFLE 816



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 208/423 (49%), Gaps = 29/423 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQV 320
           D ++ S+ + + A+ G    A + F++   R + V WNT I G V+N      +E+F+ +
Sbjct: 106 DAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDM 165

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           +       +  T+   LSA +  +EL +G+ +H  +++      V V  +++        
Sbjct: 166 VRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQ 225

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        R+VVSW T I+ FVQ       ++L+ EM + G  I+  T T++L A
Sbjct: 226 MGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLA 285

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            S         Q H  +++  ++ +  ++  LI  YA +G ++   ++F++ D+   +++
Sbjct: 286 CSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVS-NRS 344

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            W+A I+G +++  ++ +    R+ML   + PN    ASV  + +   + ELG+QLH   
Sbjct: 345 IWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSSVD---SSELGRQLHPLV 400

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+      V V ++L  MYS+   +  +  VF ++ E++ V++T+MI G+  HG S  A 
Sbjct: 401 IKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAF 460

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            + R+M   G  P+ ++  A+LSAC+    + +G ++   + + Y    S  H  C+  M
Sbjct: 461 QVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSINH--CLVSM 518

Query: 660 LGR 662
             +
Sbjct: 519 YSK 521



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 27/201 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD+      ++ +++I G+  N    EA+ L+  M  +  +   D +  SS++  C
Sbjct: 528 ARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGFHI--DRFLCSSIISIC 585

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A       GK +H +  +        V +SL+ +YS             K   +D S+  
Sbjct: 586 ANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYS-------------KSGNLDDSR-- 630

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD +   ++V W  I+  Y +     +A+  F +M+R G++P T+  V+V  A  
Sbjct: 631 ---KVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACG 687

Query: 238 SLG-------DYKSADVVYGL 251
             G        + S   VYG+
Sbjct: 688 RNGLVEEGFKHFNSMRTVYGV 708


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 200/636 (31%), Positives = 340/636 (53%), Gaps = 38/636 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD +   +  +WN++++ +V    + +A R  R M   G+  ST +  +   + ++  
Sbjct: 46  RVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAAR 105

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    +    V+ G    +++F AS+ + +YA+ G    AR++FD    RN   WN +
Sbjct: 106 RPELGAQLQSFSVRCG--LADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAI 163

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY  +  P EA+ELF+++  +  +  D  TF   L+ ++  +   L +QLH  I+K  
Sbjct: 164 IAGYTDSRKPAEAMELFLEMQRVGSVP-DGTTFAVLLATIAGPRWYSLMRQLHGKIVKYG 222

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL-MLV 399
            AL ++ LNA I                     RD++SWN+M+ A+  +GLDDE +   V
Sbjct: 223 SALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFV 282

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDV-GKQTHAYLLRHGIHFEGME---SYLIDMY 455
             M++ G   D  + T+ +S  S     D  G+  H+ +++ G+  EG+    + +I MY
Sbjct: 283 RMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGL--EGVTPVCNAMIAMY 340

Query: 456 ---AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
              A + +++ A   F       +D  +WN+M+ GY+ +GL  +A   FR M   N+  +
Sbjct: 341 TRFADNCMMEDAYNCFSSLVF--KDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTD 398

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
              +++ L +C+ +  + LG+Q+H   ++     N FV +SLI MYSK GV+  A   F 
Sbjct: 399 EFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFE 458

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           +  + +SV + +M+ GY QHG ++    LF  M    +  D +TFVA+++A S+ GLVDE
Sbjct: 459 EADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDE 518

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G +I + M+  YKI    EHY C  D+ GR G++ +A E ++ +  + + + +W +LLG+
Sbjct: 519 GSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAI-VWMTLLGA 577

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR+HG+ ELA  VA+ L   + R      +VLLS++Y+  G W +   V+K MR R L K
Sbjct: 578 CRIHGNMELASDVARHLFVAEPRQH--STYVLLSSMYSGLGMWSDRATVQKVMRNRALSK 635

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
             G SWI+V   V+ F + D+ HP+  +I++ML  L
Sbjct: 636 IPGWSWIEVKNEVHSFNADDRSHPRMVEIFDMLRML 671



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 264/575 (45%), Gaps = 51/575 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I  P    WN+++   V      +A  L   M       S   +   S L++ 
Sbjct: 44  ARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAAS--TFALGSALRSA 101

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  R   +G  +    +RC    + F  ++LL++Y+ C    DA                
Sbjct: 102 AAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDAR--------------- 146

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD M  RN+V+WN I++ Y  + +  EA+  F  M R+G  P   +F  +   ++
Sbjct: 147 ---RVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIA 203

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
               Y     ++G +VK GS     L   ++AI  Y++      +RKIFD    R+   W
Sbjct: 204 GPRWYSLMRQLHGKIVKYGSAL--GLVALNAAITAYSQCDALADSRKIFDGIESRDLISW 261

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD-LGQQLHAYI 356
           N+M+G Y  +    EA+  FV+++    I  D  +F SA+S  S+    D  G+ +H+ +
Sbjct: 262 NSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLV 321

Query: 357 IKNFVALPVIVLNAVIE-----------------------RDVVSWNTMISAFVQNGLDD 393
           IK  +     V NA+I                        +D VSWN+M++ +  +GL  
Sbjct: 322 IKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSS 381

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLI 452
           + L     M+ +    D   ++A L + S+L    +G+Q H+ +++ G    + + S LI
Sbjct: 382 DALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLI 441

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY+K G++  AR+ FE+ D        WN+M+ GY Q+G  +     F +ML+  V  +
Sbjct: 442 FMYSKCGVLGDARKSFEEADKS--SSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLD 499

Query: 513 VVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  +++ A +  G ++ G + L+    RY +   +      +D+Y ++G ++ A  + 
Sbjct: 500 HVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELI 559

Query: 572 AKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSM 605
             +P + +++ + T++     HG  E A  + R +
Sbjct: 560 ESMPFQPDAIVWMTLLGACRIHGNMELASDVARHL 594



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 52/445 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK--SSPYTSCDNYTY 110
           GR   AR++FD +     V WN II G+  +  P EA+ L+ +M++  S P    D  T+
Sbjct: 140 GRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVP----DGTTF 195

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + +L   A  R   + + +H   ++  S       N+ +  YS C +  D+         
Sbjct: 196 AVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSR-------- 247

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISF 229
                     K+FD +  R++++WN+++  Y       EA+R F RMM   GI+P   SF
Sbjct: 248 ----------KIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSF 297

Query: 230 VNVFPALSSLG-DYKSADVVYGLLVKLGSEYVNDLFVASSAIFM-YAELGCFDFARKIFD 287
            +     S  G D +    ++ L++K G E V  +  A  A++  +A+    + A   F 
Sbjct: 298 TSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFS 357

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           + + ++   WN+M+ GY  +    +A++ F + +  + I  D+    +AL + S L  L 
Sbjct: 358 SLVFKDAVSWNSMLTGYSHHGLSSDALKFF-RCMRAENIRTDEFGLSAALRSCSDLAVLR 416

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           LG+Q+H+ ++++  A    V +++I                    +   V WN+M+  + 
Sbjct: 417 LGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYA 476

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEG 446
           Q+G       L  EM      +D VT  AL++A S+    D G +  +    R+ I    
Sbjct: 477 QHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMR- 535

Query: 447 MESYL--IDMYAKSGLIKTARQIFE 469
           ME Y   +D+Y ++G +  A+++ E
Sbjct: 536 MEHYACGVDLYGRAGQLDKAKELIE 560


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 203/648 (31%), Positives = 332/648 (51%), Gaps = 33/648 (5%)

Query: 182  VFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VF  +R + +V++WNT++      + + + V  F  ML  GI P+ +SF+ +  A S+  
Sbjct: 392  VFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSE 451

Query: 241  DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN--CLERNTEVWN 298
                   ++ L++    +YV    VA+  + MY + G    A  +F       R+   WN
Sbjct: 452  ALDFGRKIHSLILTRRRDYVES-SVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWN 510

Query: 299  TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
             M+G Y QN+   EA    +++L+   ++ D ++F S LS+    QE    Q L   I++
Sbjct: 511  VMLGAYAQNDRSKEAFGALMEMLQ-GGVLPDALSFTSVLSSCYCSQE---AQVLRMCILE 566

Query: 359  NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            +      +                   V N +   DVVSW  M+SA  +N    E   L 
Sbjct: 567  SGYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLF 626

Query: 400  YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
              MQ +G + D  T+   L          +GK  HA +   G+  +  +E+ L++MY+  
Sbjct: 627  RRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNC 686

Query: 459  GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
            G  + A   FE   +  RD  +WN M A Y Q GL +EA + FRQM    V P+ +T ++
Sbjct: 687  GDWREALSFFETMKA--RDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFST 744

Query: 519  VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
             L        +  GK  H  +    LD +V V T L+ +Y+K G ++ A ++F    +  
Sbjct: 745  TLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWT 804

Query: 579  SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
             V    +I    QHG SE A+ +F  M+  G+ PD  T V+++SAC +AG+V+EG   F 
Sbjct: 805  VVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFL 864

Query: 639  LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
             M++ + I P+ EHY C  D+LGR G++  A + ++++  E N L +W SLLG+C+L G 
Sbjct: 865  TMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTL-VWTSLLGTCKLQGD 923

Query: 699  SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            +EL E  A+++LE+D  NS    HV+LSNIY   G W++ D  RK+M +  ++   G SW
Sbjct: 924  AELGERCAQRILELDPHNSAA--HVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSW 981

Query: 759  IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVD 806
             ++G  V+ F + D+ HP++ +IY +L++L + MR AG +  +  +V+
Sbjct: 982  FEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGLDVE 1029



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 267/601 (44%), Gaps = 65/601 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  +F  +     V W  +I     C        L  + + +SS     ++YT  ++L A
Sbjct: 79  AHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAP--NSYTLVAMLNA 136

Query: 117 CAETRNLRIGKAVHCHF----IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           CA +R+L IG+++H       +   S  +  V N+++NMY+ C S  DA           
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDA----------- 185

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER-YVEAVRQFRMMLRMGIRPSTISFVN 231
                    VF  +  ++VV+W  +   Y +  R Y +A+R FR ML   + P+ I+F+ 
Sbjct: 186 -------IAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFIT 238

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A +SL D      ++ LL +    +  D   +++ I MY + G ++ A  +F     
Sbjct: 239 ALGACTSLRD---GTWLHSLLHEASLGF--DPLASNALINMYGKCGDWEGAYSVFKAMAS 293

Query: 292 R---NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
           R   +   WN MI   V+     +A+ +F + L L+ +  + VT ++ L+A++    +D 
Sbjct: 294 RQELDLVSWNAMISASVEAGRHGDAMAIFRR-LRLEGMRPNSVTLITILNALAA-SGVDF 351

Query: 349 G--QQLHAYIIKNFVALPVIVLNAVIER---------------------DVVSWNTMISA 385
           G  +  H  I ++     V++ NA+I                       DV+SWNTM+ A
Sbjct: 352 GAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL--RHGIH 443
                   + +   + M   G   + V+  A+L+A SN    D G++ H+ +L  R    
Sbjct: 412 SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+ MY K G I  A  +F++     R   TWN M+  Y QN   +EAF A  +
Sbjct: 472 ESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALME 531

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           ML+  V P+ ++  SVL +C          Q+    I     ++  + T+LI M+ +   
Sbjct: 532 MLQGGVLPDALSFTSVLSSCYCSQE----AQVLRMCILESGYRSACLETALISMHGRCRE 587

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A +VF ++   + V++T M+    ++   +   +LFR M+  G+ PD  T    L  
Sbjct: 588 LEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDT 647

Query: 624 C 624
           C
Sbjct: 648 C 648



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 225/504 (44%), Gaps = 42/504 (8%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           LF+ +  I MY   G  + A  IF    ERN   W  +I    Q      A  LF  +L 
Sbjct: 60  LFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLL 119

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI----IKNFVALPVIVLNAVI------ 372
                 +  T ++ L+A +  ++L +G+ +HA I    ++       +V NA+I      
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 373 --------------ERDVVSWNTMISAFVQ-NGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                         E+DVVSW  M  A+ Q      + L +  EM  Q    + +T    
Sbjct: 180 GSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITA 239

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDS-GD 475
           L A ++LR+   G   H+ L    + F+ + S  LI+MY K G  + A  +F+   S  +
Sbjct: 240 LGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQE 296

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG-NIELGKQ 534
            D  +WNAMI+   + G   +A   FR++    + PN VT+ ++L A    G +    + 
Sbjct: 297 LDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARG 356

Query: 535 LHG--FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            HG  +   YL D  V +G ++I MY+K G  + A  VF +I  K  V     +LG  + 
Sbjct: 357 FHGRIWESGYLRD--VVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASED 414

Query: 593 GMS-ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
             S  + ++ F  M   GI+P+ ++F+A+L+ACS +  +D G +I  L+    +    + 
Sbjct: 415 RKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS 474

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
               +  M G+ G + EA    KE+      L  W  +LG+   +  ++ ++     L+E
Sbjct: 475 VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALME 531

Query: 712 MDTRNSMP---GYHVLLSNIYAEE 732
           M     +P    +  +LS+ Y  +
Sbjct: 532 MLQGGVLPDALSFTSVLSSCYCSQ 555



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 227/514 (44%), Gaps = 67/514 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFI---RCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           +  ++ ++L AC+ +  L  G+ +H   +   R +   S  V   L++MY  C S  +AE
Sbjct: 436 NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS--VATMLVSMYGKCGSISEAE 493

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           +V   + E+              +  R++V WN ++  Y + +R  EA      ML+ G+
Sbjct: 494 LV---FKEM-------------PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGV 537

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P  +SF +V   LSS    + A V+   +++ G        + ++ I M+      + A
Sbjct: 538 LPDALSFTSV---LSSCYCSQEAQVLRMCILESG---YRSACLETALISMHGRCRELEQA 591

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R +F+     +   W  M+    +N    E   LF + ++L+ ++ D  T  + L     
Sbjct: 592 RSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRR-MQLEGVIPDKFTLATTLDTCLA 650

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
              L LG+ +HA + +  +   + V NA++                     RD+VSWN M
Sbjct: 651 STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
            +A+ Q GL  E ++L  +MQ +G   D +T +  L+ +        GK  HA     G+
Sbjct: 711 SAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGL 770

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             +  + + L+ +YAK G +  A  +F    + D      NA+I    Q+G  EEA   F
Sbjct: 771 DSDVSVATGLVKLYAKCGKLDEAMSLFR--GACDWTVVLLNAIIGALAQHGFSEEAVKMF 828

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-------- 553
            +M +  V P+V T+ S++ AC   G +E G           L    + G S        
Sbjct: 829 WKMQQEGVRPDVATLVSIISACGHAGMVEEG-------CSSFLTMKEYFGISPTLEHYAC 881

Query: 554 LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
            +D+  ++G + +A  +  K+P E N++ +T+++
Sbjct: 882 FVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLL 915



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 23/285 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F+ +     V W  ++     N    E   L+ +M+        D +T ++ L  C
Sbjct: 591 ARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIP--DKFTLATTLDTC 648

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             +  L +GK +H             V N+LLNMYS C                    + 
Sbjct: 649 LASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNC------------------GDWR 690

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F+TM+ R++V+WN + + Y +     EAV  FR M   G++P  ++F        
Sbjct: 691 EALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSG 750

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                    + + L  + G +  +D+ VA+  + +YA+ G  D A  +F    +    + 
Sbjct: 751 GSALVSDGKLFHALAAESGLD--SDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLL 808

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           N +IG   Q+    EA+++F + ++ + +  D  T +S +SA   
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWK-MQQEGVRPDVATLVSIISACGH 852



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ++L +C    ++  GK  H       L+Q++F+G  LI+MY + G +  A  +F+K+ E+
Sbjct: 30  ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACS 625
           N V++T +I    Q G   RA +LFR+M       P++ T VA+L+AC+
Sbjct: 90  NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACA 138



 Score = 45.8 bits (107), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 102/283 (36%), Gaps = 38/283 (13%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C + R  L+   F+++     V WN +   +    L  EA+LL+ QM+        D  T
Sbjct: 686 CGDWREALS--FFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEG--VKPDKLT 741

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +S+ L     +  +  GK  H        +    V   L+ +Y+ C              
Sbjct: 742 FSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKC-------------- 787

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                K D    +F       VV  N I+    +     EAV+ F  M + G+RP   + 
Sbjct: 788 ----GKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATL 843

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA-------ELGCFDFA 282
           V++  A    G  +     + L +K   EY    F  S  +  YA         G  + A
Sbjct: 844 VSIISACGHAGMVEEGCSSF-LTMK---EY----FGISPTLEHYACFVDLLGRAGQLEHA 895

Query: 283 RKIFDNC-LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
            +I      E NT VW +++G                ++LELD
Sbjct: 896 EQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELD 938


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 321/592 (54%), Gaps = 70/592 (11%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           + ++  I +Y++ G   +ARK F +  + N   +N +I  Y + + P+ A +LF Q+ E 
Sbjct: 44  YFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEP 103

Query: 324 DEIVFDDVTFLSA----------LSAVSQLQELDLGQ--------------------QLH 353
           D + ++  T +SA          L   S ++E+ L                      QLH
Sbjct: 104 DLVSYN--TLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLH 161

Query: 354 AYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLD 392
           +  + +     V V NA++                      RD VSWN+MI A+ Q+   
Sbjct: 162 SVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEG 221

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            + L L  EM ++G  +D  T+ ++L+A + L +   G Q H  L++ G H    + S L
Sbjct: 222 SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGL 281

Query: 452 IDMYAK-SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG-LLEEAFVAFRQMLEHNV 509
           ID+Y+K  G +   R++FE  +  + D   WN M++GY+QN   LE+A   FRQM     
Sbjct: 282 IDLYSKCGGGMSDCRKVFE--EITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAA 568
            PN  +   V+ AC+ + +   GKQ+H  +++  +  N + V  +LI MYSK G +  A 
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F ++ E N+V+  +MI GY QHG+   +L LF+ M    I P +ITF++VLSAC++ G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLE 684
            V+EG   F++M++++ I+P  EHY C+ D+LGR GK+ EA   +  +    G  G    
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG---- 515

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
            W SLLG+CR HG+ ELA   A ++L+++  N+ P  +V+LSN+YA  G WE V  VRK 
Sbjct: 516 -WASLLGACRTHGNIELAVKAANQVLQLEPSNAAP--YVVLSNMYASAGRWEEVATVRKF 572

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           MR+RG++K+ GCSWI+V   ++ F ++D  HP   +IYE LE ++ +M+ AG
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 250/535 (46%), Gaps = 57/535 (10%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC----------LSSL 159
           +  +LK C   R+L  GK++H  +I+ F  PS +  N  + +YS C              
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 160 DAEMVGLKYVEVDYSKYD---LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
           D  +     +   Y+K     +  ++FD +   ++V++NT++S Y        A+  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF-----VASSAIF 271
           M  MG+     +   V  A          DV  GL+ +L S  V+  F     V ++ + 
Sbjct: 131 MREMGLDMDGFTLSAVITACCD-------DV--GLIGQLHSVAVSSGFDSYVSVNNALLT 181

Query: 272 MYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            Y + G  D A+++F        EV WN+MI  Y Q+    +A+ LF +++    +  D 
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG-LNVDM 240

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI---------------VLN 369
            T  S L+A + L++L  G Q H  +IK      + V   +I               V  
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFE 300

Query: 370 AVIERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
            + E D+V WNTM+S + QN    ++ L    +MQ  G+  +  +   ++SA SNL +  
Sbjct: 301 EITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS 360

Query: 429 VGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
            GKQ H+  L+  I      +++ LI MY+K G ++ AR++F++    + +  + N+MIA
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR--MAEHNTVSLNSMIA 418

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLD 545
           GY Q+G+  E+   F+ MLE  + P  +T  SVL AC   G +E G    +    ++ ++
Sbjct: 419 GYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIE 478

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERAL 599
                 + +ID+  ++G ++ A N+ A++P    S+ + +++     HG  E A+
Sbjct: 479 PEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAV 533



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 229/494 (46%), Gaps = 57/494 (11%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           +E RP +A QLFD I  P  V +NT+I  +        A+ L+S M++       D +T 
Sbjct: 86  KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMG--LDMDGFTL 143

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S+V+ AC +   L IG+ +H   +    +    V N+LL  Y              K  +
Sbjct: 144 SAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYG-------------KNGD 188

Query: 171 VDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +D +K     +VF  M   R+ V+WN+++  Y + +   +A+  F+ M+R G+     + 
Sbjct: 189 LDDAK-----RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDN 288
            +V  A + L D       +G L+K G  +  +  V S  I +Y++  G     RK+F+ 
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTG--FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301

Query: 289 CLERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
             E +  +WNTM+ GY QN   +E A+E F Q+  +     +D +F+  +SA S L    
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPS 360

Query: 348 LGQQLHAYIIKNFVALPVI-VLNAVI--------------------ERDVVSWNTMISAF 386
            G+Q+H+  +K+ +    I V NA+I                    E + VS N+MI+ +
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            Q+G++ E L L   M ++     S+T  ++LSA ++    + G   +  +++   + E 
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEP 479

Query: 446 GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
             E Y  +ID+  ++G +  A  +  +    +     W +++     +G +E A  A  Q
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPF-NPGSIGWASLLGACRTHGNIELAVKAANQ 538

Query: 504 MLE---HNVTPNVV 514
           +L+    N  P VV
Sbjct: 539 VLQLEPSNAAPYVV 552



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 183/416 (43%), Gaps = 40/416 (9%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V WN++I+ +  +    +A+ L+ +M +     + D +T +SVL A     +L  G   H
Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRG--LNVDMFTLASVLTAFTCLEDLSGGLQFH 263

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC-KVFDTMRRR 189
              I+   + +  V + L+++YS C   +                    C KVF+ +   
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD------------------CRKVFEEITEP 305

Query: 190 NVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           ++V WNT+VS Y + E ++E A+  FR M  +G RP+  SFV V  A S+L        +
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L +K      N + V ++ I MY++ G    AR++FD   E NT   N+MI GY Q+ 
Sbjct: 366 HSLALK-SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHG 424

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
             +E++ LF  +LE  +I    +TF+S LSA +    ++ G      + + F        
Sbjct: 425 IEMESLHLFQWMLE-RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKF-------- 475

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
              IE +   ++ MI    + G   E   L+  M    F   S+   +LL A     N +
Sbjct: 476 --NIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIE 530

Query: 429 VGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL---IKTARQIFEKNDSGDRDQATW 481
           +  +    +L+           L +MYA +G    + T R+         +   +W
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSW 586



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 31/137 (22%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA---------AN 569
           +L  C    ++  GK LH   I+  +  + +     I +YSK G + +A          N
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 570 VFA----------------------KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           VF+                      +IPE + V+Y T+I  Y   G +  AL LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 608 CGIEPDAITFVAVLSAC 624
            G++ D  T  AV++AC
Sbjct: 134 MGLDMDGFTLSAVITAC 150



 Score = 47.0 bits (110), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 21  PPQLPQIHSLS--PPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P Q  QIHSL+    IP  +     + ++   + G    AR+LFD +    TV  N++I 
Sbjct: 359 PSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIA 418

Query: 79  GFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           G+  + +  E++ L+  M  ++ +P +     T+ SVL ACA T  +  G
Sbjct: 419 GYAQHGIEMESLHLFQWMLERQIAPTS----ITFISVLSACAHTGRVEEG 464


>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 315/572 (55%), Gaps = 58/572 (10%)

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G   +A  +FD   + N  ++N +I GY  +N P++++ LF Q++    +  +  TF   
Sbjct: 85  GDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMP-NQFTFPFV 143

Query: 337 LSA-----------VSQLQELDLGQQLHA----YIIKNFVALPVI-----VLNAVIERDV 376
           L A           +   Q + LG   HA     I+  +VA  +I     V + + +R +
Sbjct: 144 LKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTI 203

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           VSWN+MI+ + + G  DE ++L  EM + G   D  T+ +LLSA+S   N D+G+  H Y
Sbjct: 204 VSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLY 263

Query: 437 LLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           ++  G+  + +  + LIDMYAK G ++ A+ +F++    D+D  +W +M+  Y   GL+E
Sbjct: 264 IVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQ--MLDKDVVSWTSMVNAYANQGLVE 321

Query: 496 -------------------------------EAFVAFRQMLEHNVTPNVVTIASVLPACN 524
                                          EA   F +M    V P+  T+ S+L  C+
Sbjct: 322 NAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCS 381

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             G++ LGKQ H +    ++  +V +  SLIDMY+K G +  A ++F  +PEKN V++  
Sbjct: 382 NTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNV 441

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I     HG  E A+ +F+SM+  G+ PD ITF  +LSACS++GLVD G   FD+M   +
Sbjct: 442 IIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTF 501

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           +I P  EHY C+ D+LGR G + EA   ++++  + +V+ +WG+LLG+CR++G+ E+A+ 
Sbjct: 502 RISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVV-VWGALLGACRIYGNLEIAKQ 560

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           + K+LLE+   NS  G +VLLSN+Y+E   W+++ K+RK M + G++K    S+I++ G 
Sbjct: 561 IMKQLLELGRFNS--GLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGC 618

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             +F   D+ H  S  IY +L++L   +++ G
Sbjct: 619 CYQFMVDDKRHCASTGIYSILDQLMDHLKSVG 650



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 228/519 (43%), Gaps = 77/519 (14%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+   LS   QEG    A  LFD I +P   ++N +I G+  +N P +++LL+ QM  + 
Sbjct: 73  TLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAG 132

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
           P    + +T+  VLKACA          VH   I+    P   V N++L  Y  C   L 
Sbjct: 133 PMP--NQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILS 190

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   +VFD +  R +V+WN++++ Y K     EA+  F+ ML++
Sbjct: 191 AR------------------QVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQL 232

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+     + V++  A S   +      V+  +V  G E   D  V ++ I MYA+ G   
Sbjct: 233 GVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEI--DSIVTNALIDMYAKCGHLQ 290

Query: 281 FARKIFDNCLERNTEVWNTMIGGY-------------------------------VQNNH 309
           FA+ +FD  L+++   W +M+  Y                               VQ   
Sbjct: 291 FAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQ 350

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ELF ++  +  ++ DD T +S LS  S   +L LG+Q H YI  N + + V + N
Sbjct: 351 YTEAVELFHRMC-ISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCN 409

Query: 370 AVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           ++I                    E++VVSWN +I A   +G  +E + +   MQ  G   
Sbjct: 410 SLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYP 469

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQI 467
           D +T T LLSA S+    D+G+     ++       G+E Y  ++D+  + G +  A  +
Sbjct: 470 DEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTL 529

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            +K      D   W A++      G LE A    +Q+LE
Sbjct: 530 IQKMPV-KPDVVVWGALLGACRIYGNLEIAKQIMKQLLE 567



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 207/460 (45%), Gaps = 58/460 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD + + N   +N ++  Y  +   ++++  FR M+  G  P+  +F  V  A ++   
Sbjct: 93  LFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPF 152

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           Y  A +V+   +KLG        V ++ +  Y        AR++FD+  +R    WN+MI
Sbjct: 153 YWEAVIVHAQAIKLGMG--PHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMI 210

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY +     EAI LF ++L+L  +  D  T +S LSA S+   LDLG+ +H YI+   V
Sbjct: 211 AGYSKMGFCDEAILLFQEMLQLG-VEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGV 269

Query: 362 ALPVIVLNAVIE------------------------------------------------ 373
            +  IV NA+I+                                                
Sbjct: 270 EIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNH 329

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              ++VVSWN++I   VQ G   E + L + M   G M D  T+ ++LS  SN  +  +G
Sbjct: 330 MPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALG 389

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           KQ H Y+  + I     + + LIDMYAK G ++TA  IF      +++  +WN +I    
Sbjct: 390 KQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP--EKNVVSWNVIIGALA 447

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNV 548
            +G  EEA   F+ M    + P+ +T   +L AC+  G +++G+      I  + +   V
Sbjct: 448 LHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGV 507

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
                ++D+  + G +  A  +  K+P K  V     +LG
Sbjct: 508 EHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLG 547



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 198/439 (45%), Gaps = 48/439 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+FD I+  T V WN++I G+       EAILL+ +M +       D +T  S+L A 
Sbjct: 191 ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLG--VEADVFTLVSLLSAS 248

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL----------SSLDAEMVGLK 167
           ++  NL +G+ VH + +         V N+L++MY+ C             LD ++V   
Sbjct: 249 SKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWT 308

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            +   Y+   LV    ++F+ M  +NVV+WN+I+   V+  +Y EAV  F  M   G+ P
Sbjct: 309 SMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMP 368

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND------LFVASSAIFMYAELGC 278
              + V++    S+ GD          L K    Y+ D      + + +S I MYA+ G 
Sbjct: 369 DDATLVSILSCCSNTGDLA--------LGKQAHCYICDNIITVSVTLCNSLIDMYAKCGA 420

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              A  IF    E+N   WN +IG    +    EAIE+F + ++   +  D++TF   LS
Sbjct: 421 LQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMF-KSMQASGLYPDEITFTGLLS 479

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
           A S    +D+G+     +I  F   P           V  +  M+    + G   E + L
Sbjct: 480 ACSHSGLVDMGRYYFDIMISTFRISP----------GVEHYACMVDLLGRGGFLGEAMTL 529

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
           +   QK     D V   ALL A     N ++ KQ    LL  G    G+   L +MY++S
Sbjct: 530 I---QKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSES 586

Query: 459 GL---IKTARQIFEKNDSG 474
                +K  R+I +  DSG
Sbjct: 587 QRWDDMKKIRKIMD--DSG 603



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 3/116 (2%)

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           +P   T+  +L  C+ M  ++L   +H   I + L   V     L+ +  + G + YA  
Sbjct: 36  SPTHQTLHHLLDQCSSMKRLKL---VHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHL 92

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           +F +IP+ N   Y  +I GY       ++L LFR M   G  P+  TF  VL AC+
Sbjct: 93  LFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACA 148


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 321/592 (54%), Gaps = 70/592 (11%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           + ++  I +Y++ G   +ARK F +  + N   +N +I  Y + + P+ A +LF Q+ E 
Sbjct: 44  YFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEP 103

Query: 324 DEIVFDDVTFLSA----------LSAVSQLQELDLGQ--------------------QLH 353
           D + ++  T +SA          L   S ++E+ L                      QLH
Sbjct: 104 DLVSYN--TLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLH 161

Query: 354 AYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLD 392
           +  + +     V V NA++                      RD VSWN+MI A+ Q+   
Sbjct: 162 SVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEG 221

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            + L L  EM ++G  +D  T+ ++L+A + L +   G Q H  L++ G H    + S L
Sbjct: 222 SKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGL 281

Query: 452 IDMYAK-SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG-LLEEAFVAFRQMLEHNV 509
           ID+Y+K  G +   R++FE  +  + D   WN M++GY+QN   LE+A   FRQM     
Sbjct: 282 IDLYSKCGGGMSDCRKVFE--EITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGY 339

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAA 568
            PN  +   V+ AC+ + +   GKQ+H  +++  +  N + V  +LI MYSK G +  A 
Sbjct: 340 RPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDAR 399

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F ++ E N+V+  +MI GY QHG+   +L LF+ M    I P +ITF++VLSAC++ G
Sbjct: 400 RLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTG 459

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLE 684
            V+EG   F++M++++ I+P  EHY C+ D+LGR GK+ EA   +  +    G  G    
Sbjct: 460 RVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIG---- 515

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
            W SLLG+CR HG+ ELA   A ++L+++  N+ P  +V+LSN+YA  G WE V  VRK 
Sbjct: 516 -WASLLGACRTHGNIELAVKAANQVLQLEPSNAAP--YVVLSNMYASAGRWEEVATVRKF 572

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           MR+RG++K+ GCSWI+V   ++ F ++D  HP   +IYE LE ++ +M+ AG
Sbjct: 573 MRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAG 624



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 250/535 (46%), Gaps = 57/535 (10%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC----------LSSL 159
           +  +LK C   R+L  GK++H  +I+ F  PS +  N  + +YS C              
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 160 DAEMVGLKYVEVDYSKYD---LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
           D  +     +   Y+K     +  ++FD +   ++V++NT++S Y        A+  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF-----VASSAIF 271
           M  MG+     +   V  A          DV  GL+ +L S  V+  F     V ++ + 
Sbjct: 131 MREMGLDMDXFTLSAVITACCD-------DV--GLIGQLHSVAVSSGFDSYVSVNNALLT 181

Query: 272 MYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            Y + G  D A+++F        EV WN+MI  Y Q+    +A+ LF +++    +  D 
Sbjct: 182 YYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG-LNVDM 240

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI---------------VLN 369
            T  S L+A + L++L  G Q H  +IK      + V   +I               V  
Sbjct: 241 FTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFE 300

Query: 370 AVIERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
            + E D+V WNTM+S + QN    ++ L    +MQ  G+  +  +   ++SA SNL +  
Sbjct: 301 EITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPS 360

Query: 429 VGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
            GKQ H+  L+  I      +++ LI MY+K G ++ AR++F++    + +  + N+MIA
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDR--MAEHNTVSLNSMIA 418

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLD 545
           GY Q+G+  E+   F+ MLE  + P  +T  SVL AC   G +E G    +    ++ ++
Sbjct: 419 GYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIE 478

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERAL 599
                 + +ID+  ++G ++ A N+ A++P    S+ + +++     HG  E A+
Sbjct: 479 PEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAV 533



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 229/494 (46%), Gaps = 57/494 (11%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           +E RP +A QLFD I  P  V +NT+I  +        A+ L+S M++       D +T 
Sbjct: 86  KESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMG--LDMDXFTL 143

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S+V+ AC +   L IG+ +H   +    +    V N+LL  Y              K  +
Sbjct: 144 SAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYG-------------KNGD 188

Query: 171 VDYSKYDLVCKVFDTMRR-RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +D +K     +VF  M   R+ V+WN+++  Y + +   +A+  F+ M+R G+     + 
Sbjct: 189 LDDAK-----RVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTL 243

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDN 288
            +V  A + L D       +G L+K G  +  +  V S  I +Y++  G     RK+F+ 
Sbjct: 244 ASVLTAFTCLEDLSGGLQFHGQLIKTG--FHQNSHVGSGLIDLYSKCGGGMSDCRKVFEE 301

Query: 289 CLERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
             E +  +WNTM+ GY QN   +E A+E F Q+  +     +D +F+  +SA S L    
Sbjct: 302 ITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIG-YRPNDCSFVCVISACSNLSSPS 360

Query: 348 LGQQLHAYIIKNFVALPVI-VLNAVI--------------------ERDVVSWNTMISAF 386
            G+Q+H+  +K+ +    I V NA+I                    E + VS N+MI+ +
Sbjct: 361 QGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGY 420

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
            Q+G++ E L L   M ++     S+T  ++LSA ++    + G   +  +++   + E 
Sbjct: 421 AQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG-WNYFNMMKEKFNIEP 479

Query: 446 GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
             E Y  +ID+  ++G +  A  +  +    +     W +++     +G +E A  A  Q
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPF-NPGSIGWASLLGACRTHGNIELAVKAANQ 538

Query: 504 MLE---HNVTPNVV 514
           +L+    N  P VV
Sbjct: 539 VLQLEPSNAAPYVV 552



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 183/416 (43%), Gaps = 40/416 (9%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V WN++I+ +  +    +A+ L+ +M +     + D +T +SVL A     +L  G   H
Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRG--LNVDMFTLASVLTAFTCLEDLSGGLQFH 263

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC-KVFDTMRRR 189
              I+   + +  V + L+++YS C   +                    C KVF+ +   
Sbjct: 264 GQLIKTGFHQNSHVGSGLIDLYSKCGGGMSD------------------CRKVFEEITEP 305

Query: 190 NVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           ++V WNT+VS Y + E ++E A+  FR M  +G RP+  SFV V  A S+L        +
Sbjct: 306 DLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQI 365

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + L +K      N + V ++ I MY++ G    AR++FD   E NT   N+MI GY Q+ 
Sbjct: 366 HSLALK-SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHG 424

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
             +E++ LF  +LE  +I    +TF+S LSA +    ++ G      + + F        
Sbjct: 425 IEMESLHLFQWMLE-RQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKF-------- 475

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
              IE +   ++ MI    + G   E   L+  M    F   S+   +LL A     N +
Sbjct: 476 --NIEPEAEHYSCMIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIE 530

Query: 429 VGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL---IKTARQIFEKNDSGDRDQATW 481
           +  +    +L+           L +MYA +G    + T R+         +   +W
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSW 586



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 31/137 (22%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA---------AN 569
           +L  C    ++  GK LH   I+  +  + +     I +YSK G + +A          N
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 570 VFA----------------------KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           VF+                      +IPE + V+Y T+I  Y   G +  AL LF  M+ 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133

Query: 608 CGIEPDAITFVAVLSAC 624
            G++ D  T  AV++AC
Sbjct: 134 MGLDMDXFTLSAVITAC 150



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)

Query: 21  PPQLPQIHSLS--PPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P Q  QIHSL+    IP  +     + ++   + G    AR+LFD +    TV  N++I 
Sbjct: 359 PSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIA 418

Query: 79  GFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
           G+  + +  E++ L+  M  ++ +P +     T+ SVL ACA T  +  G
Sbjct: 419 GYAQHGIEMESLHLFQWMLERQIAPTS----ITFISVLSACAHTGRVEEG 464


>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
 gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
          Length = 836

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 206/669 (30%), Positives = 339/669 (50%), Gaps = 61/669 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYS 111
           G P  A+ +FDS+ R   V WN +    V N   ++ +  +  Q  K +  T       S
Sbjct: 173 GSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHKLLREMDLQGVKPNATTYASITRGS 232

Query: 112 SVLKAC--AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           S L  C   E R L  G   H         P   V N+L+N+Y+ C      ++ G +  
Sbjct: 233 STLTGCRAMEQRLLASGYMSHV--------P---VQNALVNVYAKC-----GDLEGAR-- 274

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM-LRMGIRPSTIS 228
                      KVF+ + R++V++W+T++S Y ++ R+ EA+  +R+M     + P+ ++
Sbjct: 275 -----------KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVT 323

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           FV V  A +  GD      V+G LV LG E   D+ V S+ + MY + G  + A+K FD 
Sbjct: 324 FVGVIGACTGCGDVIRGIQVHGRLVSLGLE--TDVAVGSALVQMYVKCGSLEDAKKAFDR 381

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             +R+   WN M+  Y +   P + IE +    E  ++  + VT+ + L A S +++L  
Sbjct: 382 VEKRDVLCWNFMLSAYSERGSPQQVIEAY----EAMDVEPNAVTYTNVLIACSAMEDLAQ 437

Query: 349 GQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQ 388
           GQ++H+ I+ + +   +                     V  A+ ++DV+ WN M+  ++ 
Sbjct: 438 GQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYID 497

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM- 447
           +  D E L L   M + G   ++VT    L A S +++ + G +  A +   G   + + 
Sbjct: 498 HDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVT 557

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           ++ L++MYA  G ++ A+++F       RD   W AMIA Y Q G  EEA   ++ ML  
Sbjct: 558 DTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSE 617

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + PN VT  SVL AC+ +GNI  G+++H        + +V V  SL+ MY++ G +  A
Sbjct: 618 EIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDA 677

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
            + FAKI  ++  ++T M+  +  HG S RAL L R M+ CG+ PDA+TF +VL ACS+ 
Sbjct: 678 WSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHE 737

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           G ++ G   F  M  +Y ++PS +HY C+ D+L R G++ EA E ++ +G E   +  W 
Sbjct: 738 GSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMG-WM 796

Query: 688 SLLGSCRLH 696
            LLG+ R H
Sbjct: 797 MLLGASRTH 805



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 178/683 (26%), Positives = 326/683 (47%), Gaps = 79/683 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    +R++FD + +     W+ +I  +  N    EA LL+ +M+  S     +  T   
Sbjct: 72  GNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME--SEGIRPNAVTCLH 129

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN-----SLLNMYSTCLSSLDAEMVGLK 167
           VL AC+    L  GK VH +      + S F ++     SL+NMY+ C S  DA+     
Sbjct: 130 VLGACSYQNELPFGKKVHAYI-----SASEFKWDISLQTSLVNMYAKCGSPADAK----- 179

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                         VFD+M R+++V WN +    V   +  + +R+  +    G++P+  
Sbjct: 180 -------------AVFDSMARKDIVTWNAMAGASVHNGQSHKLLREMDL---QGVKPNAT 223

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++ ++    S+L   ++ +        L S Y++ + V ++ + +YA+ G  + ARK+F+
Sbjct: 224 TYASITRGSSTLTGCRAMEQRL-----LASGYMSHVPVQNALVNVYAKCGDLEGARKVFN 278

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               ++   W+TMI  Y Q+    EAIE++  +     +  + VTF+  + A +   ++ 
Sbjct: 279 RLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVI 338

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G Q+H  ++   +   V V +A+++                    RDV+ WN M+SA+ 
Sbjct: 339 RGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYS 398

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           + G   + ++  YE        ++VT T +L A S + +   G++ H+ ++  G+  +  
Sbjct: 399 ERG-SPQQVIEAYEAMD--VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMT 455

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ME+ L+ +Y K   +K+A Q+FE    G +D   WN M+ GY  +    EA   + +M E
Sbjct: 456 METALLSLYIKCRSLKSACQVFEA--MGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHE 513

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             V  N VT A+ L AC+ + +IE G ++         + +V   T+L++MY+  G +  
Sbjct: 514 AGVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEA 573

Query: 567 AANVFA--KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           A  VF   +   ++ V +T MI  Y Q G  E AL+L+++M    I+P+++T+ +VLSAC
Sbjct: 574 AKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSAC 633

Query: 625 SYAGLVDEGLQIFDLMQQEYK-----IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           S  G + EG +I   ++ + +     +Q S      +  M  R G + +A+    ++   
Sbjct: 634 SSLGNILEGRKIHSKLEGKAEELDVAVQNS------LLSMYARCGSLRDAWSCFAKIHNR 687

Query: 680 GNVLEIWGSLLGSCRLHGHSELA 702
            +V   W  ++ +   HGHS  A
Sbjct: 688 -DVFS-WTGMVAAFAHHGHSARA 708



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/562 (25%), Positives = 270/562 (48%), Gaps = 25/562 (4%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD M+++NV +W+ ++  Y +     EA   F  M   GIRP+ ++ ++V  A S   
Sbjct: 79  EVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSYQN 138

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      V+  +    SE+  D+ + +S + MYA+ G    A+ +FD+   ++   WN M
Sbjct: 139 ELPFGKKVHAYIS--ASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAM 196

Query: 301 IGGYVQNNHPVEAI-ELFVQVLELDEIVFDDVTFLSA-LSAVSQLQE--LDLGQQLHAYI 356
            G  V N    + + E+ +Q ++ +   +  +T  S+ L+    +++  L  G   H  +
Sbjct: 197 AGASVHNGQSHKLLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQRLLASGYMSHVPV 256

Query: 357 IKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
               V +            V N +  +DV+SW+TMISA+ Q+G   E + +   M+ +  
Sbjct: 257 QNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETS 316

Query: 408 MI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
           +  ++VT   ++ A +   +   G Q H  L+  G+  +  + S L+ MY K G ++ A+
Sbjct: 317 VEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAK 376

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           + F++ +   RD   WN M++ Y++ G  ++   A+  M   +V PN VT  +VL AC+ 
Sbjct: 377 KAFDRVEK--RDVLCWNFMLSAYSERGSPQQVIEAYEAM---DVEPNAVTYTNVLIACSA 431

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           M ++  G+++H   +   L+ ++ + T+L+ +Y K   +  A  VF  + +K+ + +  M
Sbjct: 432 MEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFM 491

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           ++GY  H     AL L+  M   G+E + +TF   L ACS    ++ G ++ + M     
Sbjct: 492 MVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKV-EAMITTKG 550

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYE-FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            +        + +M    G +  A   F    GE  +V+  W +++ S    G  E A  
Sbjct: 551 FETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVV-FWTAMIASYAQAGRGEEALA 609

Query: 705 VAKKLLEMDTRNSMPGYHVLLS 726
           + K +L  + + +   Y  +LS
Sbjct: 610 LYKTMLSEEIKPNSVTYTSVLS 631



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 211/412 (51%), Gaps = 36/412 (8%)

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L    D    DV+Y      G+ Y+++++  +  I ++ + G    +R++FD   ++N  
Sbjct: 33  LQQCQDSGELDVLYARFT--GTGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVY 90

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MIG Y QN H  EA  LF + +E + I  + VT L  L A S   EL  G+++HAY
Sbjct: 91  SWSMMIGAYAQNGHRNEAFLLF-ERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAY 149

Query: 356 I----IKNFVALPVIVLN----------------AVIERDVVSWNTMISAFVQNGLDDEG 395
           I     K  ++L   ++N                ++  +D+V+WN M  A V NG   + 
Sbjct: 150 ISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVHNGQSHK- 208

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDM 454
             L+ EM  QG   ++ T  ++   +S L      +Q    LL  G +    +++ L+++
Sbjct: 209 --LLREMDLQGVKPNATTYASITRGSSTLTGCRAMEQR---LLASGYMSHVPVQNALVNV 263

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNV 513
           YAK G ++ AR++F + +   +D  +W+ MI+ Y Q+G   EA   +R M  E +V PN 
Sbjct: 264 YAKCGDLEGARKVFNRLER--KDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNA 321

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT   V+ AC   G++  G Q+HG  +   L+ +V VG++L+ MY K G +  A   F +
Sbjct: 322 VTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDR 381

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           + +++ + +  M+  Y + G  ++ +  + +M    +EP+A+T+  VL ACS
Sbjct: 382 VEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMD---VEPNAVTYTNVLIACS 430



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 54/275 (19%)

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           NV+    LI ++ K G    +  VF  + +KN  +++ MI  Y Q+G    A  LF  M+
Sbjct: 57  NVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERME 116

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ-QEYKIQPSTEHYCCVADMLGRVGK 665
             GI P+A+T + VL ACSY   +  G ++   +   E+K   S +    + +M  + G 
Sbjct: 117 SEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQ--TSLVNMYAKCGS 174

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP------ 719
             +A      +  +  V   W ++ G+   +G S       K L EMD +   P      
Sbjct: 175 PADAKAVFDSMARKDIV--TWNAMAGASVHNGQSH------KLLREMDLQGVKPNATTYA 226

Query: 720 ----------------------GY--HV----LLSNIYAEEGNWENVDKVRKEMRERGLR 751
                                 GY  HV     L N+YA+ G+ E   KV   +     R
Sbjct: 227 SITRGSSTLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLE----R 282

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           K+V  SW  +    N    +   H ++ +IY ++E
Sbjct: 283 KDV-ISWSTMISAYN----QSGRHSEAIEIYRLME 312


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 300/533 (56%), Gaps = 51/533 (9%)

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           +HP  A+  +  + +LD I  D     S L A SQ+    +G+++H + +KN +   V V
Sbjct: 88  SHPRYALNTYTYMRKLD-IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFV 146

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQ------------------- 388
           +NA++                    ERDVVSW+TMI A++                    
Sbjct: 147 VNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206

Query: 389 ----NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
               N L+ EG  L   M ++    + +T+ +L+ +   +    +GK+ HAY+LR+G   
Sbjct: 207 YIRCNDLE-EGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM 265

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+DMY K G I++AR IF+     ++D  TW AMI+ Y Q   ++ AF  F Q
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMK--NKDVMTWTAMISAYAQANCIDYAFQLFVQ 323

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M ++ V PN +T+ S+L  C   G +++GK  H +  +  ++ +V + T+LIDMY+K G 
Sbjct: 324 MRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGD 383

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I+ A  +F++  +++  T+  M+ GYG HG  E+AL LF  M+  G++P+ ITF+  L A
Sbjct: 384 ISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHA 443

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+AGLV EG  +F+ M  ++ + P  EHY C+ D+LGR G + EAY+ ++ +    N+ 
Sbjct: 444 CSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNI- 502

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            IWG++L +C++H +S + E+ A++LL ++ +N   GY VL+SNIYA    W +V  +RK
Sbjct: 503 AIWGAMLAACKIHKNSNMGELAARELLALEPQNC--GYKVLMSNIYAAANRWNDVAGMRK 560

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +++ G++KE G S I+V G V+ F   D  HP   KI EML  ++ +++ AG
Sbjct: 561 AVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAG 613



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 201/410 (49%), Gaps = 49/410 (11%)

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           A+  +  M ++ I   +    +V  A S +   +    ++G  VK G   V+D+FV ++ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNG--LVSDVFVVNAL 150

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMI----------------------GGYVQN 307
           + MY+E G    AR +FD   ER+   W+TMI                       GY++ 
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRC 210

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           N   E   LFV+++E + +  +D+T LS + +   +  + LG++LHAYI++N   + + +
Sbjct: 211 NDLEEGERLFVRMIE-ENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLAL 269

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
             A+++                    +DV++W  MISA+ Q    D    L  +M+  G 
Sbjct: 270 ATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV 329

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
             + +T+ +LLS  +     D+GK  HAY+ + G+  +  +++ LIDMYAK G I  A++
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F  +++ DRD  TWN M+AGY  +G  E+A   F +M    V PN +T    L AC+  
Sbjct: 390 LF--SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA 447

Query: 527 GNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           G +  GK L    I  + L   V     ++D+  ++G+++ A  +   +P
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMP 497



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 244/555 (43%), Gaps = 86/555 (15%)

Query: 9   PLPPPPP-TATP--PPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSI 65
           P+PPP   T TP  P PQ    H   P      TP     L +  Q+   H+ R  F+  
Sbjct: 24  PIPPPSTFTKTPQNPSPQHQNKHQKHPSF----TPNNHLCLDQT-QQLHAHITRTHFNHA 78

Query: 66  TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
            + +   + +          P  A+  Y+ M+K       D++   SVLKAC++    R+
Sbjct: 79  QQVSFSPFES---------HPRYALNTYTYMRKLD--IEVDSFIIPSVLKACSQISVARM 127

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           GK +H   ++       FV N+L+ MYS C S + A ++  K  E D   +  + + + T
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT 187

Query: 186 M----RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +     +R++V+W  +++ Y++     E  R F  M+   + P+ I+ +++  +   +G 
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGA 247

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    ++  +++ G  +   L +A++ + MY + G    AR IFD+   ++   W  MI
Sbjct: 248 VQLGKRLHAYILRNG--FGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMI 305

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             Y Q N    A +LFVQ+ + + +  +++T +S LS  +    LD+G+  HAYI K  V
Sbjct: 306 SAYAQANCIDYAFQLFVQMRD-NGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGV 364

Query: 362 ALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            + VI+  A+                    I+RD+ +WN M++ +  +G  ++ L L  E
Sbjct: 365 EVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTE 424

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLI 461
           M+  G   + +T    L A S+                                  +GL+
Sbjct: 425 METLGVKPNDITFIGALHACSH----------------------------------AGLV 450

Query: 462 KTARQIFEK--NDSGDRDQAT-WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
              + +FEK  +D G   +   +  M+    + GLL+EA+     M    VTPN+    +
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM---PVTPNIAIWGA 507

Query: 519 VLPACNPMGNIELGK 533
           +L AC    N  +G+
Sbjct: 508 MLAACKIHKNSNMGE 522



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 176/386 (45%), Gaps = 52/386 (13%)

Query: 61  LFDSITRPTTVIWNTIIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           LF   ++ + V W  +I G++ CN+L  E   L+ +M + + +   ++ T  S++ +C  
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLE-EGERLFVRMIEENVFP--NDITMLSLIISCGF 244

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              +++GK +H + +R     S  +  +L++MY  C     A                  
Sbjct: 245 VGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSAR----------------- 287

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             +FD+M+ ++V+ W  ++S Y +      A + F  M   G+RP+ ++ V++    +  
Sbjct: 288 -AIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVN 346

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G        +  + K G E   D+ + ++ I MYA+ G    A+++F   ++R+   WN 
Sbjct: 347 GALDMGKWFHAYIDKQGVEV--DVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNV 404

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+ GY  + +  +A++LF + +E   +  +D+TF+ AL A S    +  G+ L   +I +
Sbjct: 405 MMAGYGMHGYGEKALKLFTE-METLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHD 463

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT---- 415
           F  +P           V  +  M+    + GL DE             MI+S+ VT    
Sbjct: 464 FGLVP----------KVEHYGCMVDLLGRAGLLDEAYK----------MIESMPVTPNIA 503

Query: 416 ---ALLSAASNLRNQDVGKQTHAYLL 438
              A+L+A    +N ++G+     LL
Sbjct: 504 IWGAMLAACKIHKNSNMGELAARELL 529


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 205/628 (32%), Positives = 327/628 (52%), Gaps = 53/628 (8%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
           +K+D   KVF+ M  R++++WN ++S YVK      A   F  M    +    +S+  + 
Sbjct: 105 NKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV----VSWNAML 160

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +  G  + A  ++  ++       N L  A      Y + G  + AR++FD+ ++  
Sbjct: 161 SGFAQNGFVEEARKIFDQMLVKNEISWNGLLSA------YVQNGRIEDARRLFDSKMDWE 214

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN ++GGYV+     +A  LF ++      V D +++   ++  +Q   L   ++L 
Sbjct: 215 IVSWNCLMGGYVRKKRLDDARSLFDRM-----PVRDKISWNIMITGYAQNGLLSEARRL- 268

Query: 354 AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-----FM 408
                 F  LP+        RDV +W  M+S FVQNG+ DE   +  EM ++       M
Sbjct: 269 ------FEELPI--------RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAM 314

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
           I     +  +  A  L +Q   + T ++            + ++  YA+ G I  A+ +F
Sbjct: 315 IAGYVQSQQIEKARELFDQMPSRNTSSW------------NTMVTGYAQCGNIDQAKILF 362

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +  +   RD  +W AMI+GY Q+G  EEA   F +M       N   +A  L +C  +  
Sbjct: 363 D--EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +ELGKQLHG  ++         G +L+ MY K G I  A +VF  I EK+ V++ TMI G
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y +HG  + AL+LF SMK   I+PD +T V VLSACS+ G VD+G++ F+ M Q Y I  
Sbjct: 481 YARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA 539

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           + +HY C+ D+LGR G++ EA   +K +    +    WG+LLG+ R+HG +EL E  A+K
Sbjct: 540 NAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDA-ATWGALLGASRIHGDTELGEKAAEK 598

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           + EM+  NS  G +VLLSN+YA  G W  V ++R +MR++G++K  G SW+++    + F
Sbjct: 599 VFEMEPDNS--GMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIF 656

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              D  HP++ +IY  LE L +E++  G
Sbjct: 657 TVGDCSHPEAERIYAYLEELDLELKKDG 684



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/649 (23%), Positives = 287/649 (44%), Gaps = 99/649 (15%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           + +  T T  + +S      +   AR++F+ +     + WN ++ G+V N     A  L+
Sbjct: 86  MRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALF 145

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
           +QM +       D  +++++L   A+                 F   +R +++ +L    
Sbjct: 146 NQMPEK------DVVSWNAMLSGFAQN---------------GFVEEARKIFDQMLVKNE 184

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
              +       GL    V   + +   ++FD+     +V+WN ++  YV+ +R  +A   
Sbjct: 185 ISWN-------GLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSL 237

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F    RM +R   IS+  +    +  G    A  ++  L       + D+F  ++ +  +
Sbjct: 238 FD---RMPVR-DKISWNIMITGYAQNGLLSEARRLFEELP------IRDVFAWTAMVSGF 287

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
            + G  D A +IF+   E+N   WN MI GYVQ+    +A ELF Q+   +   ++    
Sbjct: 288 VQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN---- 343

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
            + ++  +Q   +D  +               I+ + + +RD +SW  MIS + Q+G  +
Sbjct: 344 -TMVTGYAQCGNIDQAK---------------ILFDEMPQRDCISWAAMISGYAQSGQSE 387

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLI 452
           E L L  +M++ G +++   +   LS+ + +   ++GKQ H  L++ G     +  + L+
Sbjct: 388 EALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALL 447

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
            MY K G I+ A  +FE  D  ++D  +WN MIAGY ++G  +EA   F  M +  + P+
Sbjct: 448 AMYGKCGSIEEAFDVFE--DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPD 504

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VT+  VL AC+  G ++ G +                      MY   G+         
Sbjct: 505 DVTLVGVLSACSHTGFVDKGMEYFN------------------SMYQNYGIT-------- 538

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
                N+  YT MI   G+ G  + AL+L +SM      PDA T+ A+L A    G  + 
Sbjct: 539 ----ANAKHYTCMIDLLGRAGRLDEALNLMKSMP---FYPDAATWGALLGASRIHGDTEL 591

Query: 633 GLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           G +     ++ ++++P ++  Y  ++++    G+  E  E   ++ ++G
Sbjct: 592 GEKA---AEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/470 (24%), Positives = 206/470 (43%), Gaps = 65/470 (13%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D+   +  I  Y   G  + A  +F+    R+T  +N MI GY+ NN    A ++F ++
Sbjct: 58  SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
            + D I ++ +                    L  Y+    ++    + N + E+DVVSWN
Sbjct: 118 PDRDLISWNVM--------------------LSGYVKNGNLSAARALFNQMPEKDVVSWN 157

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGK-------- 431
            M+S F QNG  +E   +  +M     + + ++   LLSA   N R +D  +        
Sbjct: 158 AMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW 213

Query: 432 -------------------QTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
                                 +   R  +  +   + +I  YA++GL+  AR++FE  +
Sbjct: 214 EIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFE--E 271

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              RD   W AM++G+ QNG+L+EA   F +M E N       IA  + +      IE  
Sbjct: 272 LPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS----QQIEKA 327

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           ++L       +  +N     +++  Y++ G I+ A  +F ++P+++ +++  MI GY Q 
Sbjct: 328 REL----FDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQS 383

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G SE AL LF  MK  G   +       LS+C+    ++ G Q+   + +    Q     
Sbjct: 384 GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIA 442

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
              +  M G+ G + EA++  +++ E+  V   W +++     HG  + A
Sbjct: 443 GNALLAMYGKCGSIEEAFDVFEDITEKDIV--SWNTMIAGYARHGFGKEA 490



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 39/287 (13%)

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
           + +++ D+V WN  ISA+++ G  +  L +   M+++     +VT  A++S   +    D
Sbjct: 53  STIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRR----STVTYNAMISGYLSNNKFD 108

Query: 429 VGKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
             ++           FE M        + ++  Y K+G +  AR +F  N   ++D  +W
Sbjct: 109 CARKV----------FEKMPDRDLISWNVMLSGYVKNGNLSAARALF--NQMPEKDVVSW 156

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAM++G+ QNG +EEA   F QML      N ++   +L A    G IE  ++L  F  +
Sbjct: 157 NAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARRL--FDSK 210

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             +D  +     L+  Y +   ++ A ++F ++P ++ +++  MI GY Q+G+   A  L
Sbjct: 211 --MDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRL 268

Query: 602 FRSMKGCGIEP--DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
           F  +      P  D   + A++S     G++DE  +IF+ M ++ ++
Sbjct: 269 FEEL------PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEV 309



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 32/242 (13%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           Q+ +   L   +P   T +  + ++   Q G    A+ LFD + +   + W  +I G+  
Sbjct: 323 QIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQ 382

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           +    EA+ L+ +MK+       +    +  L +CAE   L +GK +H   ++       
Sbjct: 383 SGQSEEALHLFIKMKRDGGI--LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGY 440

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
              N+LL MY  C S  +A              +D    VF+ +  +++V+WNT+++ Y 
Sbjct: 441 IAGNALLAMYGKCGSIEEA--------------FD----VFEDITEKDIVSWNTMIAGYA 482

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           +     EA+  F  M +M I+P  ++ V V  A S  G            V  G EY N 
Sbjct: 483 RHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTG-----------FVDKGMEYFNS 530

Query: 263 LF 264
           ++
Sbjct: 531 MY 532


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 218/713 (30%), Positives = 378/713 (53%), Gaps = 48/713 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+++Y+++L+     R+   GK++HCH ++  ++   F  N LLN Y             
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTY------------- 48

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                V +   +   K+FD M   N V++ T+   + ++ ++  A R    + R G   +
Sbjct: 49  -----VHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVN 103

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
              F  +   L S+    +   V+  + KLG +   D FV ++ I  Y+  G  D AR++
Sbjct: 104 QFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQ--ADAFVGTALIDAYSVCGNVDAARQV 161

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    ++   W  M+  Y +N    +++ LF Q + +     ++ T  +AL + + L+ 
Sbjct: 162 FDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQ-MRIMGYRPNNFTISAALKSCNGLEA 220

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
             +G+ +H   +K      + V  A++E                     D++ W+ MIS 
Sbjct: 221 FKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISR 280

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
           + Q+    E L L   M++   ++ ++ T  ++L A ++L   ++G Q H+ +L+ G+  
Sbjct: 281 YAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDS 340

Query: 445 EGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
               S  L+D+YAK G I+ + ++F    S ++++  WN +I GY Q G  E+A   F  
Sbjct: 341 NVFVSNALMDVYAKCGEIENSVKLF--TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSN 398

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           ML  ++ P  VT +SVL A   +  +E G+Q+H  +I+ + +++  V  SLIDMY+K G 
Sbjct: 399 MLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGR 458

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           I+ A   F K+ +++ V++  +I GY  HG+   AL+LF  M+    +P+ +TFV VLSA
Sbjct: 459 IDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSA 518

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS AGL+D+G   F  M Q+Y I+P  EHY C+  +LGR G+  EA + + E+  + +V+
Sbjct: 519 CSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVM 578

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +W +LLG+C +H + +L +V A+++LEM+ ++     HVLLSN+YA    W+NV  VRK
Sbjct: 579 -VWRALLGACVIHKNLDLGKVCAQRVLEMEPQDD--ATHVLLSNMYATAKRWDNVAYVRK 635

Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            M+++ ++KE G SW++  G V+ F   D  HP    I+ MLE L  + R+AG
Sbjct: 636 NMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAG 688



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 202/413 (48%), Gaps = 47/413 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    ARQ+FD I     V W  ++  +  N    +++LL+ QM+        +N+T S+
Sbjct: 153 GNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRP--NNFTISA 210

Query: 113 VLKACAETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            LK+C      ++GK+VH C    C+ +   +V  +LL +Y+      +A+         
Sbjct: 211 ALKSCNGLEAFKVGKSVHGCALKVCY-DRDLYVGIALLELYTKSGEIAEAQ--------- 260

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
                    + F+ M + +++ W+ ++S Y ++++  EA+  F RM     + P+  +F 
Sbjct: 261 ---------QFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFA 311

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A +SL      + ++  ++K+G +  +++FV+++ + +YA+ G  + + K+F    
Sbjct: 312 SVLQACASLVLLNLGNQIHSCVLKVGLD--SNVFVSNALMDVYAKCGEIENSVKLFTGST 369

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E+N   WNT+I GYVQ     +A+ LF  +L LD I   +VT+ S L A + L  L+ G+
Sbjct: 370 EKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLD-IQPTEVTYSSVLRASASLVALEPGR 428

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           Q+H+  IK       +V N++I+                    +D VSWN +I  +  +G
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHG 488

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI 442
           L  E L L   MQ+     + +T   +LSA SN    D G+     +L+ +GI
Sbjct: 489 LGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 24/248 (9%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF   T    V WNTII+G+V      +A+ L+S M       +    TYSSVL+A A 
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPT--EVTYSSVLRASAS 420

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L  G+ +H   I+   N    V NSL++MY+ C    DA +                
Sbjct: 421 LVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARL---------------- 464

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
              FD M +++ V+WN ++  Y      +EA+  F MM +   +P+ ++FV V  A S+ 
Sbjct: 465 --TFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNA 522

Query: 240 GDYKSADVVY-GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERNTEVW 297
           G        +  +L   G E   + +  +  +++    G FD A K+      + +  VW
Sbjct: 523 GLLDKGRAHFKSMLQDYGIEPCIEHY--TCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVW 580

Query: 298 NTMIGGYV 305
             ++G  V
Sbjct: 581 RALLGACV 588



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 16/278 (5%)

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQI 467
           +DS +   +L  A   R+ + GK  H ++L+HG   +   ++ L++ Y   G ++ A ++
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F++      +  ++  +  G++++   + A     ++       N     ++L     M 
Sbjct: 61  FDEMPL--TNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMD 118

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             +    +H +  +     + FVGT+LID YS  G ++ A  VF  I  K+ V++T M+ 
Sbjct: 119 LADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY--- 644
            Y ++   E +L LF  M+  G  P+  T  A L +C+       GL+ F + +  +   
Sbjct: 179 CYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCN-------GLEAFKVGKSVHGCA 231

Query: 645 -KIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEE 679
            K+    + Y  +A  ++  + G++ EA +F +E+ ++
Sbjct: 232 LKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKD 269



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIHSL+      K   + + L  +  + GR   AR  FD + +   V WN +I G+  + 
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHG 488

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           L  EA+ L+  M++S+  +  +  T+  VL AC+    L  G+A   HF
Sbjct: 489 LGMEALNLFDMMQQSN--SKPNKLTFVGVLSACSNAGLLDKGRA---HF 532


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 206/647 (31%), Positives = 347/647 (53%), Gaps = 41/647 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ---FRMMLRMGIRPSTISFVNVFPALS 237
           +VF ++   N+  +N I+       RY E+ R    ++ M+   + P   ++  V  + S
Sbjct: 80  QVFCSVIDPNLTLFNAILR---NLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCS 136

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLF--VASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           S  +      ++G LVKLG     DLF  VA++   MY E   F+ A ++FD    ++  
Sbjct: 137 SFSNVGFGRTIHGYLVKLGF----DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLG 192

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
             +++     QN++      +F +++  +++V D  TF + L  ++ L  + L + +H  
Sbjct: 193 WPSSLTTEGPQNDNGEGIFRVFGRMIA-EQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCI 251

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            I + ++  ++V  AV+                    E+D V WN MI+A+ + G   E 
Sbjct: 252 AIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTEC 311

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDM 454
           L L   M + G   D  T   ++S+ + L+  D GKQTHA++LR+G   +  + + LIDM
Sbjct: 312 LELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDM 371

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y +  ++ +A +IF  N   D+   +W+AMI GY +NG    A   F +M    +  + V
Sbjct: 372 YCECKILDSACKIF--NWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFV 429

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA-- 572
            + ++LPA   +G +E  K LHG+S++  L     + T+L+  Y+K G I  A  +F   
Sbjct: 430 IMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEE 489

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           KI +K+ + + +MI  +  HG   +   L+  MK    +PD +TF+ +L+AC  +GLV++
Sbjct: 490 KIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEK 549

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G + F  M + Y  QPS EHY C+ ++LGR G + EA E VK +  + +   +WG LL +
Sbjct: 550 GKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDA-RVWGPLLSA 608

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           C++H  S+LAE  A+KL+ M+ RN+  G ++LLSNIYA  G W+ V K+R  +R +GL+K
Sbjct: 609 CKMHPGSKLAEFAAEKLINMEPRNA--GNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKK 666

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
             GCSW+++ G+V  F   DQ HP++  IY +L  L +E++    K+
Sbjct: 667 IPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKS 713



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 153/624 (24%), Positives = 277/624 (44%), Gaps = 78/624 (12%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFV 81
            L QIH+        + PT+ S+L       G  + + Q+F S+  P   ++N I+    
Sbjct: 42  HLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLT 101

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                   +L+Y QM   S +   D  TY  VL++C+   N+  G+ +H + ++   +  
Sbjct: 102 RYGESERTLLVYQQMVAKSMHP--DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLF 159

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             V  +L  MY  C+   +A                   ++FD    +++   +++ +  
Sbjct: 160 DVVATALAEMYEECIEFENAH------------------QLFDKRSVKDLGWPSSLTTEG 201

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            + +      R F  M+   + P + +F N+   ++ L   + A +V+   + + S+   
Sbjct: 202 PQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVH--CIAIVSKLSG 259

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           DL V ++ + +Y++L     ARK+FD   E++  VWN MI  Y +   P E +ELF + +
Sbjct: 260 DLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF-KSM 318

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
               I  D  T L  +S+++QL+ +D G+Q HA+I++N     V V N++I         
Sbjct: 319 ARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKIL 378

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                      ++ V+SW+ MI  +V+NG     L L  +M+  G   D V +  +L A 
Sbjct: 379 DSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAF 438

Query: 422 SNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            ++   +  K  H Y ++ G+     + + L+  YAK G I+ A+++FE+    D+D   
Sbjct: 439 VHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIM 498

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN+MI+ +  +G   + F  + +M   N  P+ VT   +L AC   G +E GK+      
Sbjct: 499 WNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKE------ 552

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
                            + K    +Y         + +   Y  M+   G+ G+   A  
Sbjct: 553 -----------------FFKEMTESYGC-------QPSQEHYACMVNLLGRAGLISEAGE 588

Query: 601 LFRSMKGCGIEPDAITFVAVLSAC 624
           L ++M    I+PDA  +  +LSAC
Sbjct: 589 LVKNMP---IKPDARVWGPLLSAC 609



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 182/388 (46%), Gaps = 24/388 (6%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           ++S  I  YA LG  + + ++F + ++ N  ++N ++    +       + ++ Q++   
Sbjct: 61  LSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVA-K 119

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------- 373
            +  D+ T+   L + S    +  G+ +H Y++K    L  +V  A+ E           
Sbjct: 120 SMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENA 179

Query: 374 ------RDV--VSWNTMISAFVQNGLDDEGLMLVY-EMQKQGFMIDSVTVTALLSAASNL 424
                 R V  + W + ++       + EG+  V+  M  +  + DS T   LL   + L
Sbjct: 180 HQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGL 239

Query: 425 RNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +  + K  H   +   +  + +  + ++ +Y+K   +  AR++F+K    ++D+  WN 
Sbjct: 240 NSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMP--EKDRVVWNI 297

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MIA Y + G   E    F+ M    +  ++ T   V+ +   +  ++ GKQ H   +R  
Sbjct: 298 MIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG 357

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D  V V  SLIDMY +  +++ A  +F  + +K+ ++++ MI GY ++G S  ALSLF 
Sbjct: 358 SDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFS 417

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVD 631
            MK  GI+ D +  + +L A  + G ++
Sbjct: 418 KMKSDGIQADFVIMINILPAFVHIGALE 445



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 68/137 (49%), Gaps = 14/137 (10%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T++ +   CN + +++   Q+H   I +   QN  + + LID Y+  G++N++  VF  +
Sbjct: 29  TLSLLFSRCNSIQHLQ---QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS--------- 625
            + N   +  ++    ++G SER L +++ M    + PD  T+  VL +CS         
Sbjct: 86  IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145

Query: 626 --YAGLVDEGLQIFDLM 640
             +  LV  G  +FD++
Sbjct: 146 TIHGYLVKLGFDLFDVV 162


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 212/660 (32%), Positives = 351/660 (53%), Gaps = 57/660 (8%)

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
           ++  ++   WN++++    T+    A+  F  M    +  +  +F  +  A ++L     
Sbjct: 12  SISHKDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIG 302
              V+  L +LG     D F A++ +  Y + G   +A ++FD   E + +V  W  +I 
Sbjct: 71  TLQVHAYLTRLG--LAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 303 GYVQNNHPVEAIELFVQVLEL-----DEIVFDDVTFLSALSAVSQL----QELDLGQQLH 353
            Y  N    EA + F ++  +      E    DV  L AL +   +      L  G  +H
Sbjct: 129 AYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188

Query: 354 AYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNGL 391
             ++K    +   + N+++                      +RDVVSWN++IS F  NG 
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGE 248

Query: 392 DDEGLMLVYEMQKQGFMI---DSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGM 447
            +  L    +M  +G      + VTV ALL + + L   +     H Y+  RH       
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308

Query: 448 E----SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +    + L+DM+A+ G +  AR+IF+  +   ++   W+AMIAGY Q    EEA   FRQ
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEG--KNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 504 ML-EHN-----VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           ML E N     V PN VT+ SV+ AC+ +G       +H +++   LDQ+  + ++LIDM
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDM 426

Query: 558 YSKSGVINYAANVFAKIPE--KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            +K G I +   VF+++ E  +  V++++MI   G HG  +RAL LF  M+  G EP+ I
Sbjct: 427 CAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEI 486

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T+++VLSACS+AGLV++G   F+ M+++Y + P+ +HY C+ D+LGR G + EA+  +  
Sbjct: 487 TYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILN 546

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +  + + L +WGSLL +C LHG+ +L E+V KK+L +D+ NS+ G+HVLL+N+Y + G W
Sbjct: 547 MPIKAD-LALWGSLLAACHLHGNCKLGEIVEKKILSLDS-NSV-GHHVLLANMYEDAGRW 603

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           ++V ++R E+R  GLRK  G S+I++G  V  F ++D+ HP+S  IY+ L+ L   +R A
Sbjct: 604 DDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKA 663



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 252/583 (43%), Gaps = 80/583 (13%)

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
           SI+   T  WN++I      N P  A+  +++M+  +  +  +N+T+ ++LKACA  R L
Sbjct: 12  SISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPS--NNFTFPALLKACAALRRL 68

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
                VH +  R      RF   +L++ Y  C         G  Y            +VF
Sbjct: 69  LPTLQVHAYLTRLGLAADRFSAAALVDAYGKC---------GHAYYAA---------QVF 110

Query: 184 DTMRRR--NVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           D M     +VV+W  ++S Y       EA + F RM    G   S    V+V     SLG
Sbjct: 111 DEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVV----SLG 166

Query: 241 DYKSA-------------DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              SA               V+GL+VK G  +     + +S + MY+       A ++F+
Sbjct: 167 ALVSACAVGCGSNCLRRGSAVHGLVVKYG--FGVSTHLGNSMVHMYSACKDVGGAWRVFN 224

Query: 288 N--CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQL 343
                +R+   WN++I G+  N     A+  F  ++      +  + VT ++ L + ++L
Sbjct: 225 GIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAEL 284

Query: 344 QELDLGQQLHAYIIKN----FVALPVIVLNAVIE--------------------RDVVSW 379
             ++    +H YI        VA  V+VL A+++                    ++VV W
Sbjct: 285 GCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCW 344

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMI------DSVTVTALLSAASNLRNQDVGKQT 433
           + MI+ + Q    +E L L  +M  +G M+      ++VT+ ++++A S L         
Sbjct: 345 SAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMI 404

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y +  G+  +  + S LIDM AK G I+  RQ+F + D   R   +W++MI     +G
Sbjct: 405 HKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHG 464

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVG 551
             + A   F +M      PN +T  SVL AC+  G +E GK   +     Y +       
Sbjct: 465 EGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY 524

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHG 593
             L+D+  ++G ++ A NV   +P K  +  + +++     HG
Sbjct: 525 ACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 20/192 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD----NY 108
           G   LAR++FD +     V W+ +I G+   + P EA+ L+ QM         +      
Sbjct: 324 GNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAV 383

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T  SV+ AC+     R    +H + +    +    + ++L++M + C    D E     +
Sbjct: 384 TLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC---GDIEHGRQVF 440

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            E+D S              R VV+W++++           A+  F  M   G  P+ I+
Sbjct: 441 SEMDEST-------------RTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEIT 487

Query: 229 FVNVFPALSSLG 240
           +++V  A S  G
Sbjct: 488 YISVLSACSHAG 499


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 190/557 (34%), Positives = 303/557 (54%), Gaps = 31/557 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+++  + MY++L   + A+ +      R    W ++I G V N   + A+  F   +  
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTN-MRR 101

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV---------------- 367
           D +  +D TF     A + +Q    G+Q+H   +K  +   V V                
Sbjct: 102 DNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGD 161

Query: 368 ----LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                + + +R++ +WN  IS  VQ+    + ++   E        +S+T  A L+A  +
Sbjct: 162 ACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVD 221

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TW 481
           +   ++G+Q HA+++R G   +  + + LID Y K G I +A  +F  N  G+R    +W
Sbjct: 222 MVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVF--NRIGNRKNVVSW 279

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            +M+A   QN   E A + F Q     V P    I+SVL AC  +G +ELG+ +H  +++
Sbjct: 280 CSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVK 338

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             ++ N+FVG++L+DMY K G I  A  VF+++PE+N VT+  MI GY   G  + AL L
Sbjct: 339 ACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRL 398

Query: 602 FRSMK--GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
           F  M     GI P  +T +++LS CS  G V+ G+QIF+ M+  Y I+P  EH+ CV D+
Sbjct: 399 FEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDL 458

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           LGR G V  AYEF++ +  +  +  +WG+LLG+CR+HG +EL ++ A+KL E+D  +S  
Sbjct: 459 LGRSGLVDRAYEFIQNMAIQPTI-SVWGALLGACRMHGKTELGKIAAEKLFELDHVDS-- 515

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G HV+LSN+ A  G WE    VRKEM++ G++K VG SWI V   ++ F +KD  H ++ 
Sbjct: 516 GNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNS 575

Query: 780 KIYEMLERLAMEMRNAG 796
           +I  ML +L   M+ AG
Sbjct: 576 EIQAMLGKLRGGMKEAG 592



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 248/522 (47%), Gaps = 69/522 (13%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            S+L++   T    +G+ +H H IR    P   F+ N L+NMYS                
Sbjct: 10  GSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYS---------------- 53

Query: 170 EVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                K DL+     V      R VV W +++S  V   R++ A+  F  M R  ++P+ 
Sbjct: 54  -----KLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPND 108

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  VF A + +    +   ++GL +K G  Y  D+FV  S   MY + G    A  +F
Sbjct: 109 FTFPCVFKASAFVQIPMTGKQIHGLALKGGMIY--DVFVGCSCFDMYCKTGFRGDACNMF 166

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   +RN   WN  I   VQ+   ++AI  F + L +     + +TF + L+A   +  L
Sbjct: 167 DEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEP-NSITFCAFLNACVDMVRL 225

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMISA 385
           +LG+QLHA+I++      V V N +I+                     ++VVSW +M++A
Sbjct: 226 NLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA 285

Query: 386 FVQNGLDDEGLMLVYEMQKQ----GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
            VQN  ++   M+  + +K+     FMI SV     LSA + L   ++G+  HA  ++  
Sbjct: 286 LVQNHEEERACMVFLQARKEVEPTDFMISSV-----LSACAELGGLELGRSVHALAVKAC 340

Query: 442 IH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
           +    F G  S L+DMY K G I+ A Q+F  ++  +R+  TWNAMI GY   G ++ A 
Sbjct: 341 VEDNIFVG--SALVDMYGKCGSIENAEQVF--SELPERNLVTWNAMIGGYAHQGDIDMAL 396

Query: 499 VAFRQML--EHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLI 555
             F +M    H + P+ VT+ S+L  C+ +G +E G Q+     + Y ++        ++
Sbjct: 397 RLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVV 456

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ-HGMSE 596
           D+  +SG+++ A      +  + +++    +LG  + HG +E
Sbjct: 457 DLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 172/413 (41%), Gaps = 40/413 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    A  +FD + +     WN  I   V +    +AI+ + +      +   ++ T
Sbjct: 154 CKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL--CVHGEPNSIT 211

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           + + L AC +   L +G+ +H   +RC       V N L++ Y  C   + AEMV     
Sbjct: 212 FCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMV----- 266

Query: 170 EVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        F+ +  R+NVV+W ++++  V+      A   F +  R  + P+   
Sbjct: 267 -------------FNRIGNRKNVVSWCSMLAALVQNHEEERACMVF-LQARKEVEPTDFM 312

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             +V  A + LG  +    V+ L VK   E  +++FV S+ + MY + G  + A ++F  
Sbjct: 313 ISSVLSACAELGGLELGRSVHALAVKACVE--DNIFVGSALVDMYGKCGSIENAEQVFSE 370

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELD 347
             ERN   WN MIGGY        A+ LF ++ L    I    VT +S LS  S++  ++
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            G Q+             + LN  IE     +  ++    ++GL D     +  M  Q  
Sbjct: 431 RGIQI----------FESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQ-- 478

Query: 408 MIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
              +++V  ALL A       ++GK     L        G    L +M A +G
Sbjct: 479 --PTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAG 529


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 219/730 (30%), Positives = 380/730 (52%), Gaps = 56/730 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  Y+ +++  +++ +   GK  H H I+   NP  F+ N+ LN+YS            
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYS------------ 55

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
            K+ E+  ++     K+FD M  R+V+++N ++S Y     Y +A+  F       ++  
Sbjct: 56  -KWGEMGNAQ-----KLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLD 109

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             S+  V  A   + D+    V++GL +  G      +F+ +  I MY +    D AR +
Sbjct: 110 KFSYAGVLSACGQIKDFALGKVIHGLAIVCG--LGQQVFLTNLLIDMYCKCERIDHARLL 167

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA--VSQL 343
           F++  E +   WN++I GY +     E ++L V+ +    +  +  T  SAL +  ++  
Sbjct: 168 FESSDELDNVSWNSLITGYARVGAYEEMLKLLVK-MHHTGLRLNAFTLGSALKSCYLNLN 226

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
             +  G+ LH Y +K  + L ++V  A+++                    ++VV +N MI
Sbjct: 227 NMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMI 286

Query: 384 SAFVQNGLDD-----EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           + F+Q    D     E L L  +MQ+QG      T ++++   +++   + GKQ HA++ 
Sbjct: 287 AGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHIC 346

Query: 439 RHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           +H I   E + S LI++Y+  G  +   + F  N +   D  +W  MIAGY QNG  E A
Sbjct: 347 KHNIQSDEFIGSTLIELYSLLGSTEDQLKCF--NSTPKLDIVSWTTMIAGYAQNGQFESA 404

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              F ++L     P+   I ++L AC  +     G+Q+HG++++  +     V  S I M
Sbjct: 405 LALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISM 464

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+KSG ++ A   F +I   + V+++ MI    QHG ++ A++LF  MK  GI P+ ITF
Sbjct: 465 YAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITF 524

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           + VL+ACS+ GLV+EGL+ ++ M+++Y ++ + +H  C+ D+L R G++++A  F+   G
Sbjct: 525 LGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSG 584

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
             G+   +W +LL  CR++      + VA+KL+E+D + S    +VLL NIY + G    
Sbjct: 585 -FGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSS--YVLLYNIYTDAGIDLP 641

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG- 796
             K+R+ M++RG+RKE G SWI+VG  V+ F   D  HP S  IY+ LE +  + R  G 
Sbjct: 642 ATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGY 701

Query: 797 -NKTIQNSNV 805
            ++ IQN  +
Sbjct: 702 IDQKIQNVTI 711



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 281/590 (47%), Gaps = 76/590 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LFD ++  + + +N +I G+      ++AI L+S+ + +      D ++Y+ VL AC
Sbjct: 63  AQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMAC--LKLDKFSYAGVLSAC 120

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            + ++  +GK +H   I C      F+ N L++MY  C               +D+++  
Sbjct: 121 GQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKC-------------ERIDHARL- 166

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA-- 235
               +F++    + V+WN++++ Y +   Y E ++    M   G+R +  +  +   +  
Sbjct: 167 ----LFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCY 222

Query: 236 --LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
             L+++  Y     ++G  VK G +   D+ V ++ + MYA+ G    A ++F     +N
Sbjct: 223 LNLNNMVSY--GKTLHGYTVKQGLDL--DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQN 278

Query: 294 TEVWNTMIGGYVQNNH-----PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ++N MI G++Q          EA++LF Q ++   I   D TF S +   + ++  + 
Sbjct: 279 VVMYNAMIAGFIQTEDIDKECAYEALKLFSQ-MQRQGIKPSDFTFSSIIKICNHIEAFEY 337

Query: 349 GQQLHAYIIKN------FVALPVIVL--------------NAVIERDVVSWNTMISAFVQ 388
           G+Q+HA+I K+      F+   +I L              N+  + D+VSW TMI+ + Q
Sbjct: 338 GKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQ 397

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGM 447
           NG  +  L L YE+   G   D   +T +LSA +++  +  G+Q H Y ++ GI     +
Sbjct: 398 NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIV 457

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           ++  I MYAKSG + +A+  FE  +  + D  +W+ MI    Q+G  ++A   F  M  +
Sbjct: 458 QNSQISMYAKSGNLDSAKITFE--EIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSY 515

Query: 508 NVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + PN +T   VL AC+  G +E G +        Y +  NV   T ++D+ S++G +  
Sbjct: 516 GIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLD 575

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           A N        NS        G+G H +  R L     + GC I  D +T
Sbjct: 576 AKNFIL-----NS--------GFGDHPVMWRTL-----LSGCRIYKDIVT 607



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 207/478 (43%), Gaps = 75/478 (15%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+  R   AR LF+S      V WN++I G+       E + L  +M  +      + +T
Sbjct: 156 CKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG--LRLNAFT 213

Query: 110 YSSVLKACAETRN--LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
             S LK+C    N  +  GK +H + ++   +    V  +LL+MY+      DA      
Sbjct: 214 LGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDA------ 267

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY-----VEAVRQFRMMLRMGI 222
                        ++F T   +NVV +N +++ +++TE        EA++ F  M R GI
Sbjct: 268 ------------IQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGI 315

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           +PS  +F ++    + +  ++    ++  + K   +  +D F+ S+ I +Y+ LG  +  
Sbjct: 316 KPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ--SDEFIGSTLIELYSLLGSTEDQ 373

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K F++  + +   W TMI GY QN     A+ LF ++L   +   D+    + LSA + 
Sbjct: 374 LKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKP-DEFIITTMLSACAD 432

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTM 382
           +     G+Q+H Y +K  +    IV N+ I                      DVVSW+ M
Sbjct: 433 VAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVM 492

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I +  Q+G   + + L   M+  G   + +T   +L+A S           H  L+  G+
Sbjct: 493 ICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS-----------HGGLVEEGL 541

Query: 443 -HFEGME------------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++E M+            + ++D+ +++G +  A+     +  GD     W  +++G
Sbjct: 542 RYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDH-PVMWRTLLSG 598



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 3/219 (1%)

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTAR 465
           F +DSV  T L+  +S   +   GK  HA++++   +    + +  +++Y+K G +  A+
Sbjct: 5   FPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQ 64

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F++    +R   ++N +I+GY   G   +A   F +     +  +  + A VL AC  
Sbjct: 65  KLFDR--MSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQ 122

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           + +  LGK +HG +I   L Q VF+   LIDMY K   I++A  +F    E ++V++ ++
Sbjct: 123 IKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSL 182

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           I GY + G  E  L L   M   G+  +A T  + L +C
Sbjct: 183 ITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSC 221


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 182/570 (31%), Positives = 306/570 (53%), Gaps = 28/570 (4%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ +L++ G   + + F+++  + +Y++ G  D+  K+FD   +RN   W ++I G+  N
Sbjct: 97  LHAMLIRGGC--LPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHN 154

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           +   EA+  F Q+    EI        S L A + L  +  G Q+H  ++K      + V
Sbjct: 155 SRFQEALSSFCQMRIEGEIA-TQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            + + +                    +D V W +MI  FV+NG   + L    +M     
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
            ID   + + LSA S L+    GK  HA +L+ G  +E  + + L DMY+KSG + +A  
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+ + S      +  A+I GY +   +E+A   F  +    + PN  T  S++ AC   
Sbjct: 334 VFQIH-SDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQ 392

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             +E G QLHG  +++   ++ FV ++L+DMY K G+ +++  +F +I   + + + T++
Sbjct: 393 AKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLV 452

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
             + QHG+   A+  F  M   G++P+A+TFV +L  CS+AG+V++GL  F  M++ Y +
Sbjct: 453 GVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGV 512

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY CV D+LGR GK+ EA +F+  +  E NV   W S LG+C++HG  E A+  A
Sbjct: 513 VPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFG-WCSFLGACKIHGDMERAKFAA 571

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
            KL++++  NS  G HVLLSNIYA+E  WE+V  +RK +++  + K  G SW+D+    +
Sbjct: 572 DKLMKLEPENS--GAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNKTH 629

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F  +D  HPQ  +IYE L+ L  +++  G
Sbjct: 630 VFGVEDWSHPQKKEIYEKLDNLLDQIKRIG 659



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 258/559 (46%), Gaps = 65/559 (11%)

Query: 88  EAILLYSQMKK--SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
           E I+ +S +K    S +   D  T + +++  A T+ L  GK +H   IR    P+ F+ 
Sbjct: 54  EEIISFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLS 113

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           N  LN+YS C              E+DY+      K+FD M +RN+V+W +I++ +    
Sbjct: 114 NHFLNLYSKC-------------GELDYT-----IKLFDKMSQRNMVSWTSIITGFAHNS 155

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
           R+ EA+  F  M   G   +  +  +V  A +SLG  +    V+ L+VK G  +  +LFV
Sbjct: 156 RFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCG--FGCELFV 213

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            S+   MY++ G    A K F+    ++  +W +MI G+V+N    +A+  +++++  D+
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVT-DD 272

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER----------- 374
           +  D     S LSA S L+    G+ LHA I+K        + NA+ +            
Sbjct: 273 VFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSAS 332

Query: 375 ----------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                      +VS   +I  +V+    ++ L    +++++G   +  T T+L+ A +N 
Sbjct: 333 NVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQ 392

Query: 425 RNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              + G Q H  +++     +  + S L+DMY K GL   + Q+F++ +  + D+  WN 
Sbjct: 393 AKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIE--NPDEIAWNT 450

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           ++  ++Q+GL   A   F  M+   + PN VT  ++L  C+  G +E G       + Y 
Sbjct: 451 LVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG-------LNYF 503

Query: 544 LDQNVFVG--------TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGM 594
                  G        + +ID+  ++G +  A +    +P E N   + + +     HG 
Sbjct: 504 SSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGD 563

Query: 595 SERALSLFRSMKGCGIEPD 613
            ERA   F + K   +EP+
Sbjct: 564 MERA--KFAADKLMKLEPE 580



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 208/488 (42%), Gaps = 83/488 (17%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LFD +++   V W +II GF  N+   EA+  + QM+      +   +  SSVL+AC  
Sbjct: 131 KLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIAT--QFALSSVLQACTS 188

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              ++ G  VHC  ++C      FV ++L +MYS C    DA                  
Sbjct: 189 LGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDA------------------ 230

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
           CK F+ M  ++ V W +++  +VK   + +A+  +  M+   +        +   A S+L
Sbjct: 231 CKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSAL 290

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF---DNCLERNTEV 296
                   ++  ++KLG EY  + F+ ++   MY++ G    A  +F    +C+  +   
Sbjct: 291 KASSFGKSLHATILKLGFEY--ETFIGNALTDMYSKSGDMVSASNVFQIHSDCI--SIVS 346

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
              +I GYV+ +   +A+  FV  L    I  ++ TF S + A +   +L+ G QLH  +
Sbjct: 347 LTAIIDGYVEMDQIEKALSTFVD-LRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQV 405

Query: 357 IK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K NF   P +                   + + +   D ++WNT++  F Q+GL    +
Sbjct: 406 VKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAI 465

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGME------- 448
                M  +G   ++VT   LL   S           HA ++  G+ +F  ME       
Sbjct: 466 ETFNGMIHRGLKPNAVTFVNLLKGCS-----------HAGMVEDGLNYFSSMEKIYGVVP 514

Query: 449 -----SYLIDMYAKSGLIKTARQI-----FEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
                S +ID+  ++G +K A        FE N  G      W + +     +G +E A 
Sbjct: 515 KEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFG------WCSFLGACKIHGDMERAK 568

Query: 499 VAFRQMLE 506
            A  ++++
Sbjct: 569 FAADKLMK 576



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 142/307 (46%), Gaps = 22/307 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A + F+ +     V+W ++I GFV N    +A+  Y +M     +   D +   S L AC
Sbjct: 230 ACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFI--DQHVLCSTLSAC 287

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  +    GK++H   ++       F+ N+L +MYS        +MV    V   +S  D
Sbjct: 288 SALKASSFGKSLHATILKLGFEYETFIGNALTDMYSK-----SGDMVSASNVFQIHS--D 340

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
            +          ++V+   I+  YV+ ++  +A+  F  + R GI P+  +F ++  A +
Sbjct: 341 CI----------SIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACA 390

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +    +    ++G +VK    +  D FV+S+ + MY + G FD + ++FD     +   W
Sbjct: 391 NQAKLEHGSQLHGQVVKF--NFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAW 448

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++G + Q+     AIE F  ++    +  + VTF++ L   S    ++ G    + + 
Sbjct: 449 NTLVGVFSQHGLGRNAIETFNGMIHRG-LKPNAVTFVNLLKGCSHAGMVEDGLNYFSSME 507

Query: 358 KNFVALP 364
           K +  +P
Sbjct: 508 KIYGVVP 514



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 10/218 (4%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+A ++        +  GKQLH   IR     N F+    +++YSK G ++Y   +F K+
Sbjct: 77  TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            ++N V++T++I G+  +   + ALS F  M+  G         +VL AC+  G +  G 
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196

Query: 635 QIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           Q+  L+    K     E +    + DM  + G++ +A +  +E+  +  VL  W S++  
Sbjct: 197 QVHCLV---VKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVL--WTSMIDG 251

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
              +G  + A     K++   T +     HVL S + A
Sbjct: 252 FVKNGDFKKALTAYMKMV---TDDVFIDQHVLCSTLSA 286


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 220/736 (29%), Positives = 381/736 (51%), Gaps = 63/736 (8%)

Query: 53  GRPHLARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           G  HLAR  F +      V  +N ++  +  N L   A+ LY +M +  P    D  TY 
Sbjct: 91  GEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEP--DKITYF 148

Query: 112 SVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            VL +C+   +LR  + +H   I        +  + N+L+NMY  C S  +A        
Sbjct: 149 IVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEAR------- 201

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      KVFD ++ R+ V+W +++S Y       EA+  ++ M   GI+P +I+F
Sbjct: 202 -----------KVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 250

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +   A + L D K+      +  ++ S  +   FV S+ I MYA  G    AR+ F+  
Sbjct: 251 TSALLACTKLVDGKA------IHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKI 304

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++   W +++  YVQ  H  EA++L+ + ++ + +  D VT+++AL A + L  L  G
Sbjct: 305 QNKHVVCWTSLMTAYVQTCHYREALDLYGR-MDHEGVHADGVTYVTALGACASLGALKEG 363

Query: 350 QQLHAYIIK-NFVALPV------------------IVLNAVIE-RDVVSWNTMISAFVQN 389
           + +H+ + +  F +L V                   V N V + R+V  W  MISA+ Q 
Sbjct: 364 KAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQA 423

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G   E L L  +M  +G   +  T + +L+A S+  + + G + H ++    +     ++
Sbjct: 424 GHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQ 483

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+ MYAK G ++ A+  FE   SG +D  +WNAMI  Y Q+GL  EA   ++ M    
Sbjct: 484 NALVTMYAKCGSLELAKSAFEA--SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQG 541

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN----VFVGTSLIDMYSKSGVI 564
           V P+ VTIAS L AC   G+++LG+++H    R L +Q+    + V T+L++MY + G +
Sbjct: 542 VLPDEVTIASSLSACAISGSLQLGREIHS---RVLKNQSFRSSLMVQTALVNMYGRCGRL 598

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             A ++F  + +++ +++T M   Y Q G +++ L L+  M   GI P+ ITF ++L  C
Sbjct: 599 ETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGC 658

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S+AGL+  G++ F  MQ E+++ P  EH+ C+ D+LGR G++ +A   V+ +  + + + 
Sbjct: 659 SHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSV- 717

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
            W ++LGSC+ H  ++ A+  A+++ E+D  N+    + LLS+I+   G  +   +V+  
Sbjct: 718 AWLTVLGSCKTHSDADTAKRAARRVKELDPENT--SLYSLLSSIFTAAGLPQEALEVQLS 775

Query: 745 MRERGLRKEVGCSWID 760
           M+E GL+K  G S I+
Sbjct: 776 MKEMGLKKPPGQSLIE 791



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 170/611 (27%), Positives = 288/611 (47%), Gaps = 45/611 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L+ C    +L  GK VH H +R     ++F+ N L+ MY  C              
Sbjct: 45  YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNC-------------- 90

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVA-WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                +  L    F        VA +N ++S Y K   +  A+  +  M   G  P  I+
Sbjct: 91  ----GEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKIT 146

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +  V  + S++G  + A  ++  +++      ++L + ++ + MY + G  + ARK+FD 
Sbjct: 147 YFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDG 206

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   W +MI  Y  N    EA++L+ Q ++ D I  D +TF SAL A ++L +   
Sbjct: 207 IKNRDAVSWTSMISSYANNGFCDEALDLYQQ-MDADGIQPDSITFTSALLACTKLVD--- 262

Query: 349 GQQLHAYIIK-----NFVALPVIVLNA--------------VIERDVVSWNTMISAFVQN 389
           G+ +HA I+      +FV   +I + A              +  + VV W ++++A+VQ 
Sbjct: 263 GKAIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 322

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
               E L L   M  +G   D VT    L A ++L     GK  H+ +   G     + +
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHT 382

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+ MYAK G +  AR +F +     R+   W AMI+ Y Q G  +EA   + QM+    
Sbjct: 383 ALLTMYAKCGELDAARAVFNRVRQ-KRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT 441

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN  T ++VL AC+  G++E G ++HG      L  NV V  +L+ MY+K G +  A +
Sbjct: 442 RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F     K+ V++  MI  Y QHG+   AL L+++M   G+ PD +T  + LSAC+ +G 
Sbjct: 502 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGS 561

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           +  G +I   + +    + S      + +M GR G++  A    +++G+  +VL  W ++
Sbjct: 562 LQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQR-DVLS-WTAM 619

Query: 690 LGSCRLHGHSE 700
             +    GH++
Sbjct: 620 TSAYAQQGHAD 630


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 376/737 (51%), Gaps = 62/737 (8%)

Query: 49  ICQEGRPHLARQLF-DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD- 106
           + + GR   A + F D   R + V WNT I G V N      + ++  M + S   +C+ 
Sbjct: 80  LAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDMVRGS---TCEP 136

Query: 107 -NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
            ++TYS VL ACA    L +G+AVH   +R  S    FV  S++NMY  C   + A M  
Sbjct: 137 NSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKC-GQMGAAM-- 193

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                            F  M  RNVV+W T ++ +V+ E  V A+     MLR G+  +
Sbjct: 194 ---------------NEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAIN 238

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +  ++  A S     + A+ V+G+++K  SE   D  V  + I  YA  G      K+
Sbjct: 239 KYTATSILLACSQTSMIREANQVHGMIIK--SELYLDHVVKEALISTYANAGAVQLCEKV 296

Query: 286 FDNC-LERNTEVWNTMIGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           F       N  +W+  I G   + H V+ +I+L  ++L    +  +D  + S  S+V   
Sbjct: 297 FQEVDTVSNRSIWSAFISGV--SRHSVQRSIQLLRRML-FQCLRPNDKCYASVFSSVDSS 353

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
           +   LG+QLH  +IK+     V+V +A+                     E+D VSW +MI
Sbjct: 354 E---LGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMI 410

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + F  +G   E   ++  M  +GF  + V+++A+LSA +       GK+ H ++LR    
Sbjct: 411 AGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGR 470

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              +   L+ MY+K   ++TAR++F+      +DQ   ++MI+GY  NG  EEA   F+ 
Sbjct: 471 TTSINHCLVSMYSKCKDLQTARKLFDATPC--KDQIMLSSMISGYATNGYSEEALSLFQL 528

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           ML      +    +S++  C  M     GK LHG++ +  +  ++ V +SL+ +YSKSG 
Sbjct: 529 MLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGN 588

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ +  VF ++   + VT+T +I GY QHG S+ AL+LF  M  CG++PD +  V+VLSA
Sbjct: 589 LDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSA 648

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           C   GLV+EG + F+ M+  Y ++P   HYCC+ D+LGR G++VEA  F++ +  + N +
Sbjct: 649 CGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSM 708

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +W +LL +CR+H    L   V  K+ E    N   G    +SNI A  G+WE V ++RK
Sbjct: 709 -VWSTLLAACRVHDDVVLGRFVENKIHE---ENCDSGCFATMSNIRANSGDWEGVMEIRK 764

Query: 744 EMRERGLRKEVGCSWID 760
            +++  + KE G S+++
Sbjct: 765 SVKD--VEKEPGWSFLE 779



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 208/423 (49%), Gaps = 29/423 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQV 320
           D ++ S+ + + A+ G    A + F++   R + V WNT I G V+N      +E+F+ +
Sbjct: 69  DAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGVEMFLDM 128

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------- 373
           +       +  T+   LSA +  +EL +G+ +H  +++      V V  +++        
Sbjct: 129 VRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQ 188

Query: 374 -------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                        R+VVSW T I+ FVQ       ++L+ EM + G  I+  T T++L A
Sbjct: 189 MGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTATSILLA 248

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            S         Q H  +++  ++ +  ++  LI  YA +G ++   ++F++ D+   +++
Sbjct: 249 CSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEVDTVS-NRS 307

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            W+A I+G +++  ++ +    R+ML   + PN    ASV  + +   + ELG+QLH   
Sbjct: 308 IWSAFISGVSRHS-VQRSIQLLRRMLFQCLRPNDKCYASVFSSVD---SSELGRQLHPLV 363

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           I+      V V ++L  MYS+   +  +  VF ++ E++ V++T+MI G+  HG S  A 
Sbjct: 364 IKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFATHGHSVEAF 423

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            + R+M   G  P+ ++  A+LSAC+    + +G ++   + + Y    S  H  C+  M
Sbjct: 424 QVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLRAYGRTTSINH--CLVSM 481

Query: 660 LGR 662
             +
Sbjct: 482 YSK 484


>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/596 (32%), Positives = 334/596 (56%), Gaps = 33/596 (5%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + NV++W + +S  VK  +   AV  F+MML    RP+ ++ ++V  A+S LG      V
Sbjct: 51  KDNVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRV 110

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           + G ++KLG E  +++ VA++ I  Y++        KIF+    ++  +W+ M+   V++
Sbjct: 111 ICGSVIKLGFE--SEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKS 167

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------- 358
               EA E+F + ++ D +  + V+ +S L A + +  L  G+++H + IK         
Sbjct: 168 GQYGEAFEIF-RAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNV 226

Query: 359 ------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
                       NF A  ++V + ++E+D++SW T+I   ++N    E       MQ   
Sbjct: 227 HNSLVDMYAKCRNFKA-SMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSC 285

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTAR 465
           F  D   V  L+ A         G   H +LL++G+  F  + + L+ MYAK G +++A 
Sbjct: 286 FGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAI 345

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F++ +   +D  +W+AMI+ +  +     A   F+QM   +  PN +T  S+L AC+ 
Sbjct: 346 IVFDQLNK--KDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSL 403

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +G  ELG+ +   + +     N F+ ++LID+Y K G IN    +F +IP K+ V +++M
Sbjct: 404 IGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSM 463

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GYG +G  + AL  F +M  CG++P+ + F++VLSACS+ GL  EG   F  M+Q+Y 
Sbjct: 464 INGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYG 523

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR-LHGHSELAEV 704
           I P   HY C+ D++ R G +  A +FV ++  E +   IWG+LL  CR  HG  E+AE+
Sbjct: 524 IIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDK-RIWGALLAGCRSTHGSIEIAEL 582

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           VA++L+ +D +N+   Y+V+LSN+YAE+G W +V+++RK + E+GL+KE+G S I+
Sbjct: 583 VAERLIGLDPQNT--SYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIE 636



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 228/485 (47%), Gaps = 51/485 (10%)

Query: 173 YSKYDL--VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
           YS YD+  V K+F+    +++V W+ +VS  VK+ +Y EA   FR M   G+ P+ +S V
Sbjct: 134 YSDYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIV 193

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++ PA +++G       ++G  +K     + +  V +S + MYA+   F  +  +FD  L
Sbjct: 194 SILPACANVGALLFGKEIHGFSIKKMFHPLTN--VHNSLVDMYAKCRNFKASMLVFDQIL 251

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQLQEL 346
           E++   W T+I G ++N+ P EA + F ++       DE +  D+     + A+ Q  E 
Sbjct: 252 EKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDL-----IVAIIQADEH 306

Query: 347 DLGQQLHAYIIKN----FVAL----------------PVIVLNAVIERDVVSWNTMISAF 386
             G   H +++KN    FV++                 +IV + + ++D +SW+ MIS  
Sbjct: 307 KFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 366

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFE 445
             +      L    +MQ      + +T  +LL A S +  Q++G+   A+  + G +   
Sbjct: 367 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 426

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + S LID+Y K G I   R IF  N+   +D   W++MI GY  NG  +EA   F  ML
Sbjct: 427 FLSSALIDLYCKFGRINQGRAIF--NEIPTKDLVCWSSMINGYGLNGCGDEALETFSNML 484

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL------IDMYS 559
              V PN V   SVL AC+       G +  G+S    ++Q   +   L      +D+ S
Sbjct: 485 ACGVKPNEVVFISVLSACS-----HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLIS 539

Query: 560 KSGVINYAANVFAKIP-EKNSVTYTTMILG-YGQHGMSERALSLFRSMKGCGIEPDAITF 617
           + G I  A     K+P E +   +  ++ G    HG  E A  +   +   G++P   ++
Sbjct: 540 RRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERL--IGLDPQNTSY 597

Query: 618 VAVLS 622
             +LS
Sbjct: 598 YVILS 602



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 230/505 (45%), Gaps = 57/505 (11%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++F+       V+W+ ++   V +    EA  ++  M+        ++ +  S+L ACA 
Sbjct: 144 KIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDG--VEPNHVSIVSILPACAN 201

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
              L  GK +H   I+   +P   V+NSL++MY+ C  +  A M+               
Sbjct: 202 VGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKC-RNFKASML--------------- 245

Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL 239
             VFD +  +++++W TI+   ++ +   EA + F  M             ++  A+   
Sbjct: 246 --VFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQA 303

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            ++K     +G L+K G   +  + + ++ + MYA+ G  + A  +FD   +++   W+ 
Sbjct: 304 DEHKFGIAFHGFLLKNG--LLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSA 361

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA----- 354
           MI  +  + HP  A+E F Q+   DE   +++TF+S L A S +   +LG+ + A     
Sbjct: 362 MISVHAHSRHPYNALETFKQMQSTDERP-NEITFVSLLQACSLIGAQELGESIQAHATKA 420

Query: 355 -YIIKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            Y+   F++  +I              + N +  +D+V W++MI+ +  NG  DE L   
Sbjct: 421 GYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETF 480

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LRHGI-----HFEGMESYLID 453
             M   G   + V   ++LSA S+   +  G    + +  ++GI     H+  M    +D
Sbjct: 481 SNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACM----VD 536

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG-YTQNGLLEEA-FVAFRQM-LEHNVT 510
           + ++ G I+ A Q   K    + D+  W A++AG  + +G +E A  VA R + L+   T
Sbjct: 537 LISRRGNIEGALQFVNKMPM-EPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNT 595

Query: 511 PNVVTIASVLPACNPMGNIELGKQL 535
              V ++++       G++E  ++L
Sbjct: 596 SYYVILSNLYAEQGRWGDVERLRKL 620


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 213/654 (32%), Positives = 348/654 (53%), Gaps = 79/654 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL-SSLG 240
           +F++    NV  + +++ +Y   + + + V  F  M   G+RP       V+P L  S G
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAF----VYPILIKSAG 111

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC--LERNTEVWN 298
           +       +  ++KLG  + +D FV ++ I MYA LG    ARK+FD     ER    WN
Sbjct: 112 N--GGIGFHAHVLKLG--HGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWN 167

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            M+ GY +     +A  LF  + E + I     T+ + ++  +++++L+  ++       
Sbjct: 168 AMVSGYWKWESEGQAQWLFDVMPERNVI-----TWTAMVTGYAKVKDLEAARRY------ 216

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
            F  +P        ER VVSWN M+S + QNGL +E L L  EM   G   D  T   ++
Sbjct: 217 -FDCMP--------ERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVI 267

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK------- 470
           SA S+  +  +       L +  I     + + L+DMYAK G I  AR+IF++       
Sbjct: 268 SACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNS 327

Query: 471 -----------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-E 506
                                  N    R+  TWN+MIAGY QNG    A   F++M+  
Sbjct: 328 VTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 387

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----LIDMYSKSG 562
             +TP+ VT+ SV+ AC  +G +ELG     + +R+L +  + +  S    +I MYS+ G
Sbjct: 388 KKLTPDEVTMVSVISACGHLGALELGN----WVVRFLTENQIKLSISGHNAMIFMYSRCG 443

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A  VF ++  ++ V+Y T+I G+  HG    A++L  +MK  GIEPD +TF+ VL+
Sbjct: 444 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLT 503

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+AGL++EG ++F+ ++      P+ +HY C+ D+LGRVG++ +A   ++ +  E + 
Sbjct: 504 ACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHA 558

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             ++GSLL + R+H   EL E+ A KL E++  NS  G  +LLSNIYA  G W++V+++R
Sbjct: 559 -GVYGSLLNASRIHKQVELGELAANKLFELEPDNS--GNFILLSNIYASAGRWKDVERIR 615

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + M++ G++K  G SW++ GG +++F   D+ H +S  IY++L  L  +MR AG
Sbjct: 616 EAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAG 669



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 212/523 (40%), Gaps = 128/523 (24%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           PH    LF+S   P   ++ +++  +       + +L++  M+        D + Y  ++
Sbjct: 50  PHYTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCG--VRPDAFVYPILI 107

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------------LSSLDAE 162
           K+         G   H H ++       FV N++++MY+              +   + +
Sbjct: 108 KSAGNG-----GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERK 162

Query: 163 MVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKT--------------E 205
           +     +   Y K++   +   +FD M  RNV+ W  +V+ Y K               E
Sbjct: 163 VADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE 222

Query: 206 RYV-----------------EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD-YKSADV 247
           R V                 E +R F  M+  GI P   ++V V  A SS GD   +A +
Sbjct: 223 RSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-----------NCL------ 290
           V  L  K   +   + FV ++ + MYA+ G    AR+IFD           N +      
Sbjct: 283 VRTLHQK---QIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTR 339

Query: 291 ---------------ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
                           RN   WN+MI GY QN     AIELF +++   ++  D+VT +S
Sbjct: 340 VGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
            +SA   L  L+LG  +  ++ +N + L +   NA+I                     RD
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           VVS+NT+IS F  +G   E + L+  M++ G   D VT   +L+A S           HA
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS-----------HA 508

Query: 436 YLLRHGIH-FEGMESYLIDMYA-------KSGLIKTARQIFEK 470
            LL  G   FE ++   ID YA       + G ++ A++  E+
Sbjct: 509 GLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRTMER 551



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 25/203 (12%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM---K 97
           T  + +S   + G    AR+LF+++     V WN++I G+  N     AI L+ +M   K
Sbjct: 329 TWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAK 388

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           K +P    D  T  SV+ AC     L +G  V           S   +N+++ MYS C S
Sbjct: 389 KLTP----DEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGS 444

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
             DA+                  +VF  M  R+VV++NT++S +      VEA+     M
Sbjct: 445 MEDAK------------------RVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTM 486

Query: 218 LRMGIRPSTISFVNVFPALSSLG 240
              GI P  ++F+ V  A S  G
Sbjct: 487 KEGGIEPDRVTFIGVLTACSHAG 509


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/606 (31%), Positives = 318/606 (52%), Gaps = 46/606 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           V D   R +  A+  ++ W V    + +AV   R M R   R    +  +V  +L+    
Sbjct: 77  VLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRR---RCPAAAQADVVLSLALKAC 133

Query: 242 YKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +SAD  YG      +VK G     D FV +S + MYA+ G  + ARK+FD   ERN   
Sbjct: 134 VRSADFRYGRRLHCDVVKAGGA---DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVS 190

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +M+ G +QN    E + LF ++ + D +   + T +S L+A + L  L  G+ +H  +
Sbjct: 191 WTSMLSGSIQNGIAEEGLVLFNEMRQ-DNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSV 249

Query: 357 IK------NFVALPVIVLNAVIER--------------DVVSWNTMISAFVQNGLDDEGL 396
           IK      +F++  ++ + A  E+              D+V W  MI  + QN    + L
Sbjct: 250 IKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDAL 309

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-----YL 451
            L    +    + +SVT+  ++SA++ LR+  +G+  HA     G+    MES      L
Sbjct: 310 QLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAI----GVKLGTMESDVVRNAL 365

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAK   +  A  IF +     +D   WN+M+AGY++NG+  E+ V F +M    ++P
Sbjct: 366 VDMYAKCQALPEANSIFGRILI--KDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISP 423

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           + +++ + L AC  + ++ +GK  H ++I+Y    N++V T+L+++YSK   +  A  VF
Sbjct: 424 DAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVF 483

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             + ++NSVT++ MI GYG  G S  ++ LF  M    I P+ + F ++LSACS+ G+V 
Sbjct: 484 NDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVT 543

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            G + FD M + + I PS +HY C+ D++ R G + EA EF++ +  +  +  +WGS L 
Sbjct: 544 AGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGI-SVWGSFLH 602

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
            C+LH   E  E   KK+  +      P ++VL+SN+Y   G W+    +R+ M+E+GL 
Sbjct: 603 GCKLHSRLEFGEEAIKKMAALHPET--PDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLV 660

Query: 752 KEVGCS 757
           K  GCS
Sbjct: 661 KLPGCS 666



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 168/630 (26%), Positives = 305/630 (48%), Gaps = 55/630 (8%)

Query: 42  IRSR---LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           IR+R   LS     G    AR + D   RP    +  ++   V      +A+ L+  M++
Sbjct: 55  IRARTKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRR 114

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
             P  +  +   S  LKAC  + + R G+ +HC  ++       FV NSL++MY+     
Sbjct: 115 RCPAAAQADVVLSLALKACVRSADFRYGRRLHCDVVKA-GGADGFVMNSLVDMYA----- 168

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                   K  +++ ++     KVFD +  RNVV+W +++S  ++     E +  F  M 
Sbjct: 169 --------KAGDLENAR-----KVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMR 215

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  + PS  + V+V  A + LG       ++G ++K G     + F+++S + MYA+   
Sbjct: 216 QDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYG--LSTNSFISASLLDMYAKCEK 273

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + AR++FD     +  +W  MI GY QN  P++A++LF+   +   IV + VT  + +S
Sbjct: 274 VEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHK-KFVSIVPNSVTIATVIS 332

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
           A +QL+ L LG+ +HA  +K       +V NA+++                    +DVV+
Sbjct: 333 ASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVA 392

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN+M++ + +NG+ +E L+L   M+ QG   D+++V   LSA   L +  +GK  H Y +
Sbjct: 393 WNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAI 452

Query: 439 RHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           ++       + + L+++Y+K   + +A+++F  ND  DR+  TW+AMI GY   G    +
Sbjct: 453 KYAFMSNIYVNTALLNLYSKCADLPSAQRVF--NDMTDRNSVTWSAMIGGYGMQGDSAGS 510

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLID 556
              F +ML+ N+ PN V   S+L AC+  G +  GK+      R+  +  ++     ++D
Sbjct: 511 IDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVD 570

Query: 557 MYSKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           + +++G +  A      +P K  ++ + + + G   H   E      + M    + P+  
Sbjct: 571 VMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKM--AALHPETP 628

Query: 616 TFVAVLSA--CSYAGLVDEGLQIFDLMQQE 643
            F  ++S    SY G  D+   I   MQ++
Sbjct: 629 DFYVLMSNLYTSY-GRWDKSQTIRRWMQEQ 657


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 216/619 (34%), Positives = 346/619 (55%), Gaps = 39/619 (6%)

Query: 209 EAVRQFRMMLRM-GIRP-STISFVNVFP--ALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           EA + F  M  M  + P S +  ++ FP  +L+     K    V+G ++  G   + D  
Sbjct: 12  EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTG---LVDFM 68

Query: 265 VA--SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           V   +  + MYA+ G    AR++F   +E+++  WN+MI G  QN   +EA+E + Q + 
Sbjct: 69  VGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERY-QSMR 127

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
             EI+    T +S+LS+ + L+   LGQQ+H   +K  + L V V NA++          
Sbjct: 128 RHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 187

Query: 373 ----------ERDVVSWNTMISAFVQNGLD-DEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                     E D VSWN++I A   +     E +       + G  ++ +T +++LSA 
Sbjct: 188 ECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAV 247

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S+L   ++GKQ H   L++ I  E   E+ LI  Y K G +    +IF +  S  RD  T
Sbjct: 248 SSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRM-SERRDDVT 306

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN+MI+GY  N LL +A      ML+     +    A+VL A   +  +E G ++H  S+
Sbjct: 307 WNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSV 366

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           R  L+ +V VG++L+DMYSK G ++YA   F  +P +NS ++ +MI GY +HG  E AL 
Sbjct: 367 RACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALK 426

Query: 601 LFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
           LF +MK  G   PD +TFV VLSACS+AGL++EG + F+ M   Y + P  EH+ C+AD+
Sbjct: 427 LFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADL 486

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS-CRLHGH-SELAEVVAKKLLEMDTRNS 717
           LGR G++ +  +F+ ++  + NVL IW ++LG+ CR +G  +EL +  A+ L +++  N+
Sbjct: 487 LGRAGELDKLEDFIDKMPVKPNVL-IWRTVLGACCRANGRKAELGKKAAEMLFQLEPENA 545

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
           +   +VLL N+YA  G WE++ K RK+M++  ++KE G SW+ +   V+ F + D+ HP 
Sbjct: 546 VN--YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPD 603

Query: 778 SHKIYEMLERLAMEMRNAG 796
           +  IY+ L+ L  +MR+AG
Sbjct: 604 TDVIYKKLKELNRKMRDAG 622



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 243/497 (48%), Gaps = 49/497 (9%)

Query: 118 AETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           AE   L+ G+ VH H I     +    + N L+NMY+ C S  DA               
Sbjct: 44  AEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADAR-------------- 89

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               +VF  M  ++ V+WN++++   +   ++EAV +++ M R  I P + + ++   + 
Sbjct: 90  ----RVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSC 145

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +SL   K    ++G  +KLG +   ++ V+++ + +YAE G  +  RKIF +  E +   
Sbjct: 146 ASLKWAKLGQQIHGESLKLGIDL--NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 203

Query: 297 WNTMIGGYVQNNHPV-EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           WN++IG    +   + EA+  F+  L   + + + +TF S LSAVS L   +LG+Q+H  
Sbjct: 204 WNSIIGALASSERSLPEAVACFLNALRAGQKL-NRITFSSVLSAVSSLSFGELGKQIHGL 262

Query: 356 IIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDE 394
            +K  +A      NA+I                      RD V+WN+MIS ++ N L  +
Sbjct: 263 ALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAK 322

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            L LV+ M + G  +DS     +LSA +++   + G + HA  +R  +  +  + S L+D
Sbjct: 323 ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 382

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPN 512
           MY+K G +  A + F  N    R+  +WN+MI+GY ++G  EEA   F  M L+    P+
Sbjct: 383 MYSKCGRLDYALRFF--NTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPD 440

Query: 513 VVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT   VL AC+  G +E G K     S  Y L   +   + + D+  ++G ++   +  
Sbjct: 441 HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFI 500

Query: 572 AKIPEKNSVTYTTMILG 588
            K+P K +V     +LG
Sbjct: 501 DKMPVKPNVLIWRTVLG 517



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 196/418 (46%), Gaps = 59/418 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F  +    +V WN++I G   N    EA+  Y  M++        ++T  S L +C
Sbjct: 88  ARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPG--SFTLISSLSSC 145

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  +  ++G+ +H   ++   + +  V N+L+ +Y+                E  Y   +
Sbjct: 146 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA----------------ETGY--LN 187

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYV-EAVRQFRMMLRMGIRPSTISFVNVFPAL 236
              K+F +M   + V+WN+I+     +ER + EAV  F   LR G + + I+F +V  A+
Sbjct: 188 ECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAV 247

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SSL   +    ++GL +K      ++    ++ I  Y + G  D   KIF    ER  +V
Sbjct: 248 SSLSFGELGKQIHGLALKY--NIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDV 305

Query: 297 -WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+MI GY+ N    +A++L   +L+  + + D   + + LSA + +  L+ G ++HA 
Sbjct: 306 TWNSMISGYIHNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHAC 364

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            ++  +   V+V +A+++                    R+  SWN+MIS + ++G  +E 
Sbjct: 365 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 424

Query: 396 LMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGM-ESY 450
           L L   M+  G    D VT   +LSA S           HA LL  G  HFE M +SY
Sbjct: 425 LKLFANMKLDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHFESMSDSY 471



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 27/328 (8%)

Query: 26  QIHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN- 83
           QIH  S  +   L      + ++   + G  +  R++F S+     V WN+II     + 
Sbjct: 156 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSE 215

Query: 84  -NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
            +LP EA+  +    ++      +  T+SSVL A +      +GK +H   ++       
Sbjct: 216 RSLP-EAVACFLNALRAG--QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEA 272

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM-RRRNVVAWNTIVSWY 201
              N+L+  Y  C      EM G +             K+F  M  RR+ V WN+++S Y
Sbjct: 273 TTENALIACYGKC-----GEMDGCE-------------KIFSRMSERRDDVTWNSMISGY 314

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
           +  E   +A+     ML+ G R  +  +  V  A +S+   +    V+   V+   E  +
Sbjct: 315 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE--S 372

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ V S+ + MY++ G  D+A + F+    RN+  WN+MI GY ++    EA++LF  + 
Sbjct: 373 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMK 432

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLG 349
              +   D VTF+  LSA S    L+ G
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHAGLLEEG 460


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 218/724 (30%), Positives = 361/724 (49%), Gaps = 70/724 (9%)

Query: 111 SSVLKAC---AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           S++LKA    ++ RNL  G+AVH   IR  ++      N L+N Y+ C     A      
Sbjct: 17  STLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAH----- 71

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA---VRQFRMMLRMGIRP 224
                         +F+ +  ++VV+WN++++ Y +      +   ++ FR M    I P
Sbjct: 72  -------------SIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILP 118

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           +  +   +F A SSL         + L+VK+ S    D++V +S + MY + G       
Sbjct: 119 NAYTLAGIFKAESSLQSCTVGRQAHALVVKMSS--FGDIYVDTSLVGMYCKAGLKYLYMV 176

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD-DVTFLSALSAVSQL 343
            +   L    +V                 ++  +  LE  E   D D  F + LS+++  
Sbjct: 177 YYGFWLCYKKDVLR-------------RQLKSSICFLEEKEKESDSDYVFTAVLSSLAAT 223

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             + LG+Q+H   +KN +   V + NA++                    +R+ ++W+ M+
Sbjct: 224 VYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 283

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + + QNG   E + L   M   G      T+  +L+A S++     GKQ H++LL+ G  
Sbjct: 284 TGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLG-- 341

Query: 444 FEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           FE      + L+DMYAK+G +  AR+ F+     +RD A W ++I+GY QN   EEA + 
Sbjct: 342 FERHLFATTALVDMYAKAGCLADARKGFDCLQ--ERDVALWTSLISGYVQNSDNEEALIL 399

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           +R+M    + PN  T+ASVL AC+ +  +ELGKQ+HG +I++     V +G++L  MY+K
Sbjct: 400 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTK 459

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +     VF + P K+ V++  MI G   +G  + AL LF  M   G EPD +TFV +
Sbjct: 460 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNI 519

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           +SACS+ G V+ G   F +M  ++ + P  +HY C+ D+L R G++ E  EF+ E     
Sbjct: 520 ISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFI-ESASID 578

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           + L +W  LL +C+ HG+ EL     +KL+ + +R S    +V L+ IY   G   +V++
Sbjct: 579 HGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESST--YVQLAGIYTALGRMRDVER 636

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTI 800
           V K MR  G+ KEVGCSWI +    + F   D  HP+  +  +++  ++ +M   G  T+
Sbjct: 637 VWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQMLEEGFVTV 696

Query: 801 QNSN 804
            NS+
Sbjct: 697 LNSS 700



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/535 (25%), Positives = 257/535 (48%), Gaps = 61/535 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCN---NLPYEAILLYSQMKKSSPYTSCDNYT 109
           G+   A  +F++I     V WN++I G+  N   +  +  + L+ +M+        + YT
Sbjct: 65  GQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILP--NAYT 122

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            + + KA +  ++  +G+  H   ++  S    +V  SL+ MY            GLKY+
Sbjct: 123 LAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCK---------AGLKYL 173

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            + Y  + L C   D +RR+      + + +  + E+  +               S   F
Sbjct: 174 YMVYYGFWL-CYKKDVLRRQ----LKSSICFLEEKEKESD---------------SDYVF 213

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  +L++         ++G+ VK G   +  + ++++ + MY++    + A K+FD+ 
Sbjct: 214 TAVLSSLAATVYVGLGRQIHGITVKNG--LLGFVALSNALVTMYSKCESLNEACKMFDSS 271

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +RN+  W+ M+ GY QN   +EAI+LF ++     I   + T +  L+A S +  L  G
Sbjct: 272 GDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLVEG 330

Query: 350 QQLHAYIIK-----NFVALPVIV---------------LNAVIERDVVSWNTMISAFVQN 389
           +QLH++++K     +  A   +V                + + ERDV  W ++IS +VQN
Sbjct: 331 KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQN 390

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
             ++E L+L   M+  G + +  T+ ++L A S+L   ++GKQ H + ++HG   E  + 
Sbjct: 391 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG 450

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S L  MY K G ++    +F +    ++D  +WNAMI+G + NG  +EA   F +ML   
Sbjct: 451 SALSTMYTKCGSLEDGNLVFRRTP--NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 508

Query: 509 VTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
             P+ VT  +++ AC+  G +E G    H  S ++ LD  V     ++D+ S++G
Sbjct: 509 TEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAG 563



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 221/480 (46%), Gaps = 60/480 (12%)

Query: 85  LPYEAILLYSQMKKSSPY------TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
           L Y+  +L  Q+K S  +       S  +Y +++VL + A T  + +G+ +H   ++   
Sbjct: 182 LCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGL 241

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
                + N+L+ MYS C S  +A                  CK+FD+   RN + W+ +V
Sbjct: 242 LGFVALSNALVTMYSKCESLNEA------------------CKMFDSSGDRNSITWSAMV 283

Query: 199 SWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
           + Y +    +EA++ F  M   GI+PS  + V V  A S +        ++  L+KLG E
Sbjct: 284 TGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFE 343

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
               LF  ++ + MYA+ GC   ARK FD   ER+  +W ++I GYVQN+   EA+ L+ 
Sbjct: 344 --RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY- 400

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------------- 365
           + ++   I+ +D T  S L A S L  L+LG+Q+H + IK+   L V             
Sbjct: 401 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKC 460

Query: 366 -------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                  +V      +DVVSWN MIS    NG  DE L L  EM  +G   D VT   ++
Sbjct: 461 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNII 520

Query: 419 SAASNLRNQDVG-KQTHAYLLRHGI-----HFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           SA S+    + G    H    + G+     H+  M    +D+ +++G +K  ++  E + 
Sbjct: 521 SACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACM----VDVLSRAGQLKETKEFIE-SA 575

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIE 530
           S D     W  +++    +G  E    A  ++  L    +   V +A +  A   M ++E
Sbjct: 576 SIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVE 635



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 196/466 (42%), Gaps = 56/466 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FDS     ++ W+ ++ G+  N    EAI L+S+M  +    S   YT   VL AC
Sbjct: 264 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPS--EYTIVGVLNAC 321

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           ++   L  GK +H   ++       F   +L++MY+      DA                
Sbjct: 322 SDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR--------------- 366

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K FD ++ R+V  W +++S YV+     EA+  +R M   GI P+  +  +V  A S
Sbjct: 367 ---KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 423

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SL   +    V+G  +K G  +  ++ + S+   MY + G  +    +F     ++   W
Sbjct: 424 SLATLELGKQVHGHTIKHG--FGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSW 481

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G   N    EA+ELF ++L  +    DDVTF++ +SA S    ++ G      + 
Sbjct: 482 NAMISGLSHNGQGDEALELFEEMLA-EGTEPDDVTFVNIISACSHKGFVERGWSYFHMMS 540

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMI---SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
             F   P +   A +  DV+S    +     F+++   D GL L                
Sbjct: 541 DQFGLDPKVDHYACM-VDVLSRAGQLKETKEFIESASIDHGLCL---------------W 584

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE--KND 472
             LLSA  N  N ++G      L+  G         L  +Y   G ++   ++++  + +
Sbjct: 585 RILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTN 644

Query: 473 SGDRD--------QATWNAMIAGYTQNGLLEEA----FVAFRQMLE 506
              ++        +  W+  + G T +  +EE      +  RQMLE
Sbjct: 645 GVSKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQMLE 690



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           E N   +  T+   L   +   N+  G+ +H   IR            L++ Y+K G + 
Sbjct: 9   EINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLA 68

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHG---MSERALSLFRSMKGCGIEPDAITFVAVLS 622
            A ++F  I  K+ V++ ++I GY Q+G    S   + LFR M+   I P+A T   +  
Sbjct: 69  KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFK 128

Query: 623 A 623
           A
Sbjct: 129 A 129


>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/593 (33%), Positives = 323/593 (54%), Gaps = 55/593 (9%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           + ++G E   D      A    + LG   +A KIF+   + +  V+N M+  Y +     
Sbjct: 120 IFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILR 179

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           + + LF Q+ E D +  D  T+   L A+  L+++  G+++  +I+K  + L   V N++
Sbjct: 180 KVLLLFQQLRE-DGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSL 238

Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-MID 410
           I+                    RD VSWN MIS +V+    ++ +    EMQ++G    D
Sbjct: 239 IDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPD 298

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE- 469
             TV + LSA + L+N ++G + H Y+ +       +++ L+DMYAK G +  AR IF+ 
Sbjct: 299 EATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDNALLDMYAKCGCLNIARNIFDE 358

Query: 470 ---KN------------DSGD-------------RDQATWNAMIAGYTQNGLLEEAFVAF 501
              KN            + GD             RD   W AMI GY Q    ++A   F
Sbjct: 359 MSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALF 418

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           R+M    + P+  T+ ++L  C  +G +E GK +HG+     +  +V VGT+LI+MYSK 
Sbjct: 419 REMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKC 478

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G ++ +  +F ++ +K++ ++T++I G   +G +  AL LF  M+  G +PD ITF+ VL
Sbjct: 479 GCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVL 538

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SACS+ GLV+EG + F+ M++ ++I+P  EHY CV D+LGR G + EA E ++E+  E  
Sbjct: 539 SACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENC 598

Query: 682 --VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
             V+ ++G+LL +CR+H + ++ E +AKKL  +++ +S    H LL+NIYA    WE+  
Sbjct: 599 EIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDS--SIHTLLANIYASVDRWEDAK 656

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           KVR++M+E G++K  GCS I+V G V+ F   D  HP+  +I  ML R+  ++
Sbjct: 657 KVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 246/571 (43%), Gaps = 116/571 (20%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQE---GRPHLARQLFDSITRPTTVIWNTIIIG 79
           QL QI S    I         ++L   C +   G    A ++F+ +  P+  ++N ++  
Sbjct: 112 QLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKI 171

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +    +  + +LL+ Q+++   +   D +TY  VLKA    R++R G+ V    ++   +
Sbjct: 172 YAKRGILRKVLLLFQQLREDGLWP--DGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD 229

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +VYNSL++MY                   + S  +   K+FD M  R+ V+WN ++S
Sbjct: 230 LDNYVYNSLIDMY------------------YELSNVENAKKLFDEMTTRDSVSWNVMIS 271

Query: 200 WYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            YV+  R+ +A+  FR M + G  +P   + V+   A ++L + +  D ++  + K   E
Sbjct: 272 GYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRK---E 328

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFD------------------NCLE--------- 291
                 + ++ + MYA+ GC + AR IFD                  NC +         
Sbjct: 329 LGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFD 388

Query: 292 ----RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+  +W  MI GYVQ +H  +A+ LF + +++ +I  D  T ++ L+  +QL  L+
Sbjct: 389 KSPVRDVVLWTAMINGYVQFHHFDDAVALFRE-MQIQKIKPDKFTVVTLLTGCAQLGALE 447

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
            G+ +H Y+ +N + + V+V  A+IE                    +D  SW ++I    
Sbjct: 448 QGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLA 507

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            NG   E L L  EM++ G   D +T   +LSA S                 HG      
Sbjct: 508 MNGKTSEALRLFSEMERVGAKPDDITFIGVLSACS-----------------HG------ 544

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQM 504
                      GL++  R+ F       R +     +  +I    + GLL+EA    +++
Sbjct: 545 -----------GLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEI 593

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
              N    V    ++L AC    N+++G++L
Sbjct: 594 PIENCEIVVPLYGALLSACRIHNNVDMGERL 624



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 138/272 (50%), Gaps = 10/272 (3%)

Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL--IKTARQIFEKNDSGDRDQA 479
           N ++ D  KQ  + + R G+  +    + L+   A S L  ++ A +IF  N   D    
Sbjct: 106 NCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIF--NYVQDPSLF 163

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
            +N M+  Y + G+L +  + F+Q+ E  + P+  T   VL A   + ++  G+++ GF 
Sbjct: 164 VYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI 223

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           ++  +D + +V  SLIDMY +   +  A  +F ++  ++SV++  MI GY +    E A+
Sbjct: 224 VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAI 283

Query: 600 SLFRSMKGCGIE-PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           + FR M+  G E PD  T V+ LSAC+    ++ G +I + +++E       ++   + D
Sbjct: 284 NTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLD 341

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           M  + G +  A     E+  + NV+  W S++
Sbjct: 342 MYAKCGCLNIARNIFDEMSMK-NVI-CWTSMI 371


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 208/695 (29%), Positives = 365/695 (52%), Gaps = 59/695 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++F+ +  P TV WN I+     +    EA+  + +M+     T  D  T+ ++L AC
Sbjct: 258 AREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTP-DKVTFITILNAC 316

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    L  G+ ++   ++C  +    V N ++ MYS+C                   + D
Sbjct: 317 SSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSC------------------GRID 358

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                F TM  R+ ++WNTI+S + +     EAV  FR ML  GI P   +F+++    +
Sbjct: 359 NAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTA 418

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   + A ++  L+V+ G E   D+F+ S+ I M++  G    AR +FD+  +R+  +W
Sbjct: 419 RM---QEAKILSELMVESGVEL--DVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMW 473

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            ++I  YVQ+    +A+    +++ L+ ++ +D T ++AL+A + L  L  G+ +H++ I
Sbjct: 474 TSIISSYVQHGSSDDALGC-TRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAI 532

Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           +   A    V NA+I                    +++VSWNT+ +A+VQ     E L L
Sbjct: 533 ERGFAASPAVGNALINMYAKCGCLEEADLVFHQCGKNLVSWNTIAAAYVQRDKWREALQL 592

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAK 457
             EMQ +G   D V+   +L+  S+      G + H  LL  G+  + + S  L++MY  
Sbjct: 593 FQEMQLEGLKADKVSFVTVLNGCSSASE---GSKIHNILLETGMESDHIVSTALLNMYTA 649

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           S  +  A +IF + +   RD  +WNAMIAG  ++GL  EA   F++M    V P+ ++  
Sbjct: 650 SKSLDEASRIFSRMEF--RDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFV 707

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQ----NVFVGTSLIDMYSKSGVINYAANVFAK 573
           +VL A +      L KQ      + + DQ    +  VG +++ M+ +SG +  A   F +
Sbjct: 708 TVLNAFSGSSPSSL-KQAR-LVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFER 765

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           I E+++ ++  ++  + QHG  E+AL LFR M+     PD+IT V+VLSACS+ GL++EG
Sbjct: 766 IRERDAASWNVIVTAHAQHGEVEQALKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEG 825

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
              F  M +E+ I  S EHY CV D+L R G++ +A E ++++    + + +W +LL +C
Sbjct: 826 YYHFTSMGREFGIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYV-LWMTLLSAC 884

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           ++ G  + A+ VA++++E+D R   P  +V+LS++
Sbjct: 885 KVQGDEKRAKRVAERVMELDPRR--PAAYVVLSSV 917



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 191/731 (26%), Positives = 349/731 (47%), Gaps = 72/731 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V W ++I+ +V ++   EA+ L+ +M+ S      +  TY++ + AC
Sbjct: 157 ARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLP--NRITYATAISAC 214

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++  GK +H   +         V  +++NMY  C S  DA                
Sbjct: 215 AHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAR--------------- 259

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPAL 236
              +VF+ M   N V+WN IV+   +    VEA+  F RM L+ G  P  ++F+ +  A 
Sbjct: 260 ---EVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNAC 316

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           SS       +++Y  +++ G  Y   L V +  + MY+  G  D A   F   +ER+   
Sbjct: 317 SSPATLTFGELLYECILQCG--YDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAIS 374

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WNT+I G+ Q     EA+ LF ++L  + I  D  TF+S +   +++QE  +  +L   +
Sbjct: 375 WNTIISGHAQAGFCDEAVHLFRRMLA-EGITPDKFTFISIIDGTARMQEAKILSEL---M 430

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           +++ V L V +++A+I                    +RD+V W ++IS++VQ+G  D+ L
Sbjct: 431 VESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDAL 490

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
                M+ +G M +  T+   L+A ++L     GK  H++ +  G      + + LI+MY
Sbjct: 491 GCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMY 550

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G ++ A  +F +     ++  +WN + A Y Q     EA   F++M    +  + V+
Sbjct: 551 AKCGCLEEADLVFHQC---GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVS 607

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             +VL  C+       G ++H   +   ++ +  V T+L++MY+ S  ++ A+ +F+++ 
Sbjct: 608 FVTVLNGCSSASE---GSKIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRME 664

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ V++  MI G  +HG+S  A+ +F+ M+  G+ PD I+FV VL+A  ++G     L+
Sbjct: 665 FRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNA--FSGSSPSSLK 722

Query: 636 IFDLMQQ---EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
              L+++   +   +  T     +  M GR G++ EA    + + E       W  ++ +
Sbjct: 723 QARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAA--SWNVIVTA 780

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA-------EEGNWENVDKVRKEM 745
              HG  E A    K    M   +S P    L+S + A       EEG + +   + +E 
Sbjct: 781 HAQHGEVEQA---LKLFRRMQQESSRPDSITLVSVLSACSHGGLIEEGYY-HFTSMGREF 836

Query: 746 RERGLRKEVGC 756
              G ++  GC
Sbjct: 837 GIAGSQEHYGC 847



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 288/604 (47%), Gaps = 52/604 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F S+  P+ V WN+++  F  +    +A  ++ +MK      + D  T+ +VL  C
Sbjct: 56  AVTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG--LAPDRITFVTVLDGC 113

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             T +L  GK +H   +      +  V  SL+ MY  C    DA                
Sbjct: 114 TATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDAR--------------- 158

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD +  ++VV+W +++  YV+ +R VEA+  F  M   G+ P+ I++     A +
Sbjct: 159 ---RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACA 215

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +       +++  +++ G E  +D+ V+ + + MY + G  + AR++F+     NT  W
Sbjct: 216 HVESMADGKLIHSQVLEDGFE--SDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSW 273

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N ++    Q+   VEA+  F ++        D VTF++ L+A S    L  G+ L+  I+
Sbjct: 274 NAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECIL 333

Query: 358 KNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLDDEGLM 397
           +      +IV N +                    +ERD +SWNT+IS   Q G  DE + 
Sbjct: 334 QCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVH 393

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
           L   M  +G   D  T  +++   + ++   +  +    ++  G+  +  + S LI+M++
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARMQEAKILSE---LMVESGVELDVFLVSALINMHS 450

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G ++ AR +F  +D  DRD   W ++I+ Y Q+G  ++A    R M    +  N  T+
Sbjct: 451 RYGNVREARSLF--DDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTL 508

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            + L AC  +  +  GK +H  +I      +  VG +LI+MY+K G +  A  VF +   
Sbjct: 509 VTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG- 567

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN V++ T+   Y Q      AL LF+ M+  G++ D ++FV VL+ CS A    EG +I
Sbjct: 568 KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSA---SEGSKI 624

Query: 637 FDLM 640
            +++
Sbjct: 625 HNIL 628



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 274/551 (49%), Gaps = 50/551 (9%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  T+ ++L  CA+   +  G+ VH             V N+ ++MY  C    DA    
Sbjct: 1   DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDA---- 56

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                           VF ++   + V+WN++++ + +  ++ +A + F+ M   G+ P 
Sbjct: 57  --------------VTVFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPD 102

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
            I+FV V    ++ GD     +++G +++ G E   ++ V +S I MY + GC + AR++
Sbjct: 103 RITFVTVLDGCTATGDLSRGKLLHGFVLEAGLE--RNVMVGTSLIKMYGKCGCVEDARRV 160

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    ++   W +MI  YVQ++  VEA+ELF   +    ++ + +T+ +A+SA + ++ 
Sbjct: 161 FDKLALQDVVSWTSMIMTYVQHDRCVEALELF-HRMRPSGVLPNRITYATAISACAHVES 219

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI----------------ER----DVVSWNTMISA 385
           +  G+ +H+ ++++     V+V  A++                ER    + VSWN +++A
Sbjct: 220 MADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAA 279

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHG--I 442
             Q+G   E L     MQ QG    D VT   +L+A S+      G+  +  +L+ G   
Sbjct: 280 CTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDT 339

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
           H   + + ++ MY+  G I  A   F  +   +RD  +WN +I+G+ Q G  +EA   FR
Sbjct: 340 HLI-VGNCIMTMYSSCGRIDNAAAFF--STMVERDAISWNTIISGHAQAGFCDEAVHLFR 396

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +ML   +TP+  T  S++   +    ++  K L    +   ++ +VF+ ++LI+M+S+ G
Sbjct: 397 RMLAEGITPDKFTFISII---DGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYG 453

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A ++F  + +++ V +T++I  Y QHG S+ AL   R M+  G+  +  T V  L+
Sbjct: 454 NVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALN 513

Query: 623 ACSYAGLVDEG 633
           AC+    + EG
Sbjct: 514 ACASLTALSEG 524



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 270/578 (46%), Gaps = 71/578 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A   F ++     + WNTII G        EA+ L+ +M       + D +T+ S
Sbjct: 355 GRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEG--ITPDKFTFIS 412

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++   A  +  +I   +    +        F+ ++L+NM+S             +Y  V 
Sbjct: 413 IIDGTARMQEAKILSEL---MVESGVELDVFLVSALINMHS-------------RYGNVR 456

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            ++      +FD M+ R++V W +I+S YV+     +A+   R+M   G+  +  + V  
Sbjct: 457 EAR-----SLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTA 511

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +SL       +++   ++ G  +     V ++ I MYA+ GC + A  +F  C  +
Sbjct: 512 LNACASLTALSEGKLIHSHAIERG--FAASPAVGNALINMYAKCGCLEEADLVFHQC-GK 568

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WNT+   YVQ +   EA++LF Q ++L+ +  D V+F++ L+  S   E   G ++
Sbjct: 569 NLVSWNTIAAAYVQRDKWREALQLF-QEMQLEGLKADKVSFVTVLNGCSSASE---GSKI 624

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           H  +++  +    IV  A++                     RD+VSWN MI+   ++GL 
Sbjct: 625 HNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLS 684

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES--- 449
            E + +   MQ +G   D ++   +L+A S      + KQ  A L+   I  +G E+   
Sbjct: 685 REAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSL-KQ--ARLVEKLISDQGYETDTI 741

Query: 450 ---YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
               ++ M+ +SG +  AR+ FE+    +RD A+WN ++  + Q+G +E+A   FR+M +
Sbjct: 742 VGNAIVSMFGRSGRLAEARRAFERIR--ERDAASWNVIVTAHAQHGEVEQALKLFRRMQQ 799

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-----LIDMYSKS 561
            +  P+ +T+ SVL AC+  G IE G     +    +  +    G+      ++D+ +++
Sbjct: 800 ESSRPDSITLVSVLSACSHGGLIEEGY----YHFTSMGREFGIAGSQEHYGCVVDLLARA 855

Query: 562 GVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERA 598
           G ++ A  +  K+P   S V + T++      G  +RA
Sbjct: 856 GRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRA 893



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 178/373 (47%), Gaps = 16/373 (4%)

Query: 333 FLSALSAVSQLQELDLGQQ--LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           F+ +    S+ +  DL Q   +H Y     V   V V  ++     VSWN++++AF ++G
Sbjct: 23  FVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFARDG 82

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ES 449
              +   +   M+ QG   D +T   +L   +   +   GK  H ++L  G+    M  +
Sbjct: 83  QFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGT 142

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI MY K G ++ AR++F+K     +D  +W +MI  Y Q+    EA   F +M    V
Sbjct: 143 SLIKMYGKCGCVEDARRVFDK--LALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGV 200

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            PN +T A+ + AC  + ++  GK +H   +    + +V V  ++++MY K G +  A  
Sbjct: 201 LPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDARE 260

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAG 628
           VF ++P  N+V++  ++    QHG    AL  F+ M+   G  PD +TF+ +L+ACS   
Sbjct: 261 VFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPA 320

Query: 629 LVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
            +  G  +++ ++Q  Y       +  C+  M    G++  A  F   + E   +   W 
Sbjct: 321 TLTFGELLYECILQCGYDTHLIVGN--CIMTMYSSCGRIDNAAAFFSTMVERDAI--SWN 376

Query: 688 SLLGSCRLHGHSE 700
           +++      GH++
Sbjct: 377 TIIS-----GHAQ 384


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 186/517 (35%), Positives = 297/517 (57%), Gaps = 27/517 (5%)

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D+ARK+FD   +R+  +WNT+I GY       EA+ L+   +    +  D+ TF   + +
Sbjct: 79  DYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSN-MHGAGLFPDNYTFPFVVRS 137

Query: 340 VSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSW 379
            + L  L  G+++H  I+K+      FV   ++              V   ++ R++VSW
Sbjct: 138 CAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSW 197

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             +I+ +VQN    EGL +  EM   G   ++VT+ ++L A + L   ++GK  H Y ++
Sbjct: 198 TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIK 257

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+  +  + + LI +Y K G ++TAR +F+      ++  +WNAMIA Y QN     A 
Sbjct: 258 LGVDPDVSLTNALIALYGKCGNVETARSLFDGMVV--QNLVSWNAMIAAYEQNNAGANAV 315

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             FR+M    V  + +T+ SV+ AC  +G +  G+ +H    R  L+ NV +  +LIDMY
Sbjct: 316 KLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMY 375

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           +K G I+ A  VF ++P ++ V++T+MI     HG  E AL LF  MK  G++P++ TF 
Sbjct: 376 AKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFA 435

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           AV +AC ++GLV+EG + F+ M ++Y I P  EH  C+ D+LGR G ++EAYEF+ ++  
Sbjct: 436 AVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPV 495

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENV 738
           E +V  +WG+LLGSCR+H + ELAE+VA+KL  +D +     ++VL+SNIYAE G WE+ 
Sbjct: 496 EPDV-SVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVT--FYVLMSNIYAEAGRWEDA 552

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
            ++RK M ER L+K  G S ++V    + F S  +  
Sbjct: 553 ARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQ 589



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 266/552 (48%), Gaps = 60/552 (10%)

Query: 22  PQLPQIHSLSPPIPKLKTPTIRSRL--SKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P L +IH+L       +   + ++L  +  C       AR++FD + +    +WNT+I G
Sbjct: 43  PDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRG 102

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +       EA+ LYS M  +  +   DNYT+  V+++CA    LR GK VHC+ ++   +
Sbjct: 103 YADAGPCEEALALYSNMHGAGLFP--DNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFD 160

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              FV +SL+ MYS    +L  E+V                  F  M  RN+V+W  +++
Sbjct: 161 SDVFVQSSLVAMYSQSGETLGMELV------------------FGEMVVRNIVSWTAVIA 202

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            YV+   + E +  FR M+  G +P+ ++ V+V PA + L       +++G  +KLG + 
Sbjct: 203 GYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVD- 261

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
             D+ + ++ I +Y + G  + AR +FD  + +N   WN MI  Y QNN    A++LF +
Sbjct: 262 -PDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLF-R 319

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------ 373
            ++ +++ FD +T +S +SA + L  L+ G+ +H  + +  + + V + NA+I+      
Sbjct: 320 RMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCG 379

Query: 374 --------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                         R VVSW +MI A   +G  ++ L L   M+ +G   +S T  A+ +
Sbjct: 380 NIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFT 439

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A  +    + G++    ++R      G+E  + ++D+  ++G +  A +  +K    + D
Sbjct: 440 ACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPV-EPD 498

Query: 478 QATWNAMIAGYTQNGLLEEA-FVAFRQMLEHNVTPNVVTIASVLPACNPMGNI--ELGKQ 534
            + W A++     +  LE A  VA +  L   + P  VT   +      M NI  E G+ 
Sbjct: 499 VSVWGALLGSCRIHSNLELAELVAEKLFL---LDPQTVTFYVL------MSNIYAEAGRW 549

Query: 535 LHGFSIRYLLDQ 546
                +R L+++
Sbjct: 550 EDAARLRKLMEE 561



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI-DMYSKSGVINYAANVFAKIPEK 577
           +L  C+ + ++    ++H   +     QN+ + T LI      +  ++YA  +F ++P++
Sbjct: 35  LLNCCSSLPDLS---RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKR 91

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +   + T+I GY   G  E AL+L+ +M G G+ PD  TF  V+ +C+    + EG ++
Sbjct: 92  DVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEV 150


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/546 (33%), Positives = 299/546 (54%), Gaps = 29/546 (5%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y + G   +ARK+FD    R+   WN+MI  Y++N    EAI+++ Q +  D I+ D+ T
Sbjct: 120 YLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIY-QRMVPDGILPDEFT 178

Query: 333 FLSALSAVSQLQELDLGQQLHAYII-------KNFVALPVI--------------VLNAV 371
           F S   A S L  +  GQ+ H   +         FV   ++              V + V
Sbjct: 179 FSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQV 238

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           + +DVV +  +I  +  +G D E L +   M K+G   +  T++++L    NL +   G+
Sbjct: 239 VGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGR 298

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
             H  +++ G+      ++ L+ MY + GL+  + ++F++    + +Q TW ++I G  Q
Sbjct: 299 LIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFI--NPNQVTWTSVIVGLVQ 356

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG  E A + FRQML  ++TPN  T++SVL AC+ +  +E GKQ+H   +++ LD + +V
Sbjct: 357 NGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYV 416

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           G +LID Y K G    A +VF  + E + V+  +MI  Y Q+G    AL LF  MK  G+
Sbjct: 417 GAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGL 476

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
           EP+ +T++ VLSAC+ AGL++EG  IF   +    I+ + +HY C+ D+LGR G++ EA 
Sbjct: 477 EPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAE 536

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             + ++     V  IW +LL +CR+HG  E+A+ V  +++++   +   G HVLLSN+YA
Sbjct: 537 MLINQVNISDVV--IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDG--GTHVLLSNLYA 592

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
             GNW  V +++  MRE  L+K    SW+DV   ++ F + D  HP    I E LE L  
Sbjct: 593 STGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIE 652

Query: 791 EMRNAG 796
           +++  G
Sbjct: 653 KVKELG 658



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 242/518 (46%), Gaps = 60/518 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           YSS+++ C   +++     +  H + R F +    + N L++ Y  C S           
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHS---LGNKLIDAYLKCGS----------- 125

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
             V Y++     KVFD +  R++VAWN++++ Y++  R  EA+  ++ M+  GI P   +
Sbjct: 126 --VVYAR-----KVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFT 178

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +VF A S LG        +G  V LG   V+++FV S+ + MYA+ G    AR + D 
Sbjct: 179 FSSVFKAFSDLGLVHEGQRAHGQSVVLGVG-VSNVFVGSALVDMYAKFGKMRDARLVSDQ 237

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            + ++  ++  +I GY  +    E++++F  + +   I  ++ T  S L     L++L  
Sbjct: 238 VVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTK-KGIEANEYTLSSVLVCCGNLEDLTS 296

Query: 349 GQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           G+ +H  I+K                      V   + V    I  + V+W ++I   VQ
Sbjct: 297 GRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQ 356

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-M 447
           NG ++  L+   +M +     +S T++++L A S+L   + GKQ HA +++ G+  +  +
Sbjct: 357 NGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYV 416

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + LID Y K G  + AR +F  N   + D  + N+MI  Y QNG   EA   F  M + 
Sbjct: 417 GAALIDFYGKCGSTEIARSVF--NGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 474

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFS-------IRYLLDQNVFVGTSLIDMYSK 560
            + PN VT   VL ACN  G +E G   H FS       I    D        ++D+  +
Sbjct: 475 GLEPNNVTWLGVLSACNNAGLLEEG--CHIFSSARNSGNIELTKDHY----ACMVDLLGR 528

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           +G +  A  +  ++   + V + T++     HG  E A
Sbjct: 529 AGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMA 566



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 224/501 (44%), Gaps = 83/501 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V WN++I  ++ N    EAI +Y +M         D +T+SSV KA 
Sbjct: 129 ARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILP--DEFTFSSVFKAF 186

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           ++   +  G+  H   +      S  FV ++L++MY+      DA +V            
Sbjct: 187 SDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS----------- 235

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                  D +  ++VV +  ++  Y       E+++ FR M + GI  +  +  +V    
Sbjct: 236 -------DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCC 288

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +L D  S  +++GL+VK G E  + +   +S + MY   G  D + K+F   +  N   
Sbjct: 289 GNLEDLTSGRLIHGLIVKAGLE--SAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVT 346

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W ++I G VQN     A+  F Q+L    I  +  T  S L A S L  L+ G+Q+HA +
Sbjct: 347 WTSVIVGLVQNGREEIALLKFRQMLR-SSITPNSFTLSSVLRACSSLAMLEQGKQIHAIV 405

Query: 357 IK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K       +V   +I              V N ++E DVVS N+MI ++ QNG   E L
Sbjct: 406 MKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEAL 465

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L   M+  G   ++VT   +LSA +N           A LL  G H             
Sbjct: 466 QLFSGMKDTGLEPNNVTWLGVLSACNN-----------AGLLEEGCH------------- 501

Query: 457 KSGLIKTARQIFEKNDSGDRD--QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
              +  +AR      +SG+ +  +  +  M+    + G L+EA +   Q+   N++ +VV
Sbjct: 502 ---IFSSAR------NSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQV---NIS-DVV 548

Query: 515 TIASVLPACNPMGNIELGKQL 535
              ++L AC   G++E+ K++
Sbjct: 549 IWRTLLSACRIHGDVEMAKRV 569


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 212/705 (30%), Positives = 360/705 (51%), Gaps = 48/705 (6%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+A   +++L+ GK +H   +        +V  +L+++Y +C                 
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSC----------------- 51

Query: 173 YSKYDLVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFV 230
            + +D    VFD +     +   N +++ Y +   Y EA+  F ++M    ++P + ++ 
Sbjct: 52  -NLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYP 110

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +V  A   L       +++  LVK G   + D+ V SS + MYA+   F+ A K+FD   
Sbjct: 111 SVLKACGGLRRVVLGQMIHTCLVKEG--LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP 168

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +++   WNT+I  Y Q+    EA+  F  +        D VT  +A+S+ ++L +LD G+
Sbjct: 169 DKDVACWNTVISCYYQSGKFEEALRYFGMMRRFG-FEPDSVTITTAISSCARLLDLDRGR 227

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
           ++H  ++ +   +   V  A+++                    + VV+WN+MI+ +   G
Sbjct: 228 EIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKG 287

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
                + L   M  +G      T+T+ L A S       GK  H Y++R+ I  +  + S
Sbjct: 288 DGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNS 347

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            L+D+Y K G +++A  IF+          +WN MI+GY   G L +A   F +M +  V
Sbjct: 348 SLMDLYFKCGKVESAETIFKLMPK--TTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFV 405

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P+ +T  SVL AC+ +  +E G+++H   +   L  N  V  +L+DMY+K G +  A  
Sbjct: 406 EPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFG 465

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF  +PE++ V++T+MI  YG HG    AL LF  M    ++PD +TF+A+LSACS+AGL
Sbjct: 466 VFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGL 525

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           VD+GL  F+ M   Y I P  EHY C+  +LGR G++ EAYE ++   E  +  ++  +L
Sbjct: 526 VDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTL 585

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
             +CRLH + +L   +A+ L++ D  +S    +++LSN+YA  G W+ V  VR +M++ G
Sbjct: 586 FSACRLHKNLDLGVEIAENLIDKDPDDS--STYIILSNMYASFGKWDEVRMVRSKMKDLG 643

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           L+K  GCSWI++   +  F  +D  H     I  +L  L   M +
Sbjct: 644 LKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMED 688



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 290/631 (45%), Gaps = 82/631 (12%)

Query: 58  ARQLFDSITRPTTV-IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+ +FD I  P  + + N ++ G+  N +  EA+ L+ ++    P    D+YTY SVLKA
Sbjct: 57  AKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLM-CYPCLKPDSYTYPSVLKA 115

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   R + +G+ +H   ++        V +SL+ MY+ C                  +++
Sbjct: 116 CGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKC------------------NEF 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           +   K+FD M  ++V  WNT++S Y ++ ++ EA+R F MM R G  P +++      + 
Sbjct: 158 ECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSC 217

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L D      ++  LV  G  +  D FV+++ + MY + G  + A ++F+    +    
Sbjct: 218 ARLLDLDRGREIHKELVNSG--FRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVA 275

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+MI GY      +  I+LF ++   + +     T  S L A SQ  +L  G+ +H YI
Sbjct: 276 WNSMINGYGFKGDGISCIQLFKRMYS-EGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYI 334

Query: 357 IKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEG 395
           I+N +  P I LN+ +                     +   VSWN MIS +V  G   + 
Sbjct: 335 IRNRIQ-PDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDA 393

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDM 454
           L L  EM K     D++T T++L+A S L   + G++ H  ++   + + E +   L+DM
Sbjct: 394 LRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDM 453

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK G ++ A  +F+     +RD  +W +MI  Y  +G + EA   F +ML+ NV P+ V
Sbjct: 454 YAKCGAVEEAFGVFKC--LPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRV 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  ++L AC+  G ++ G  L+ F                          N   NV+  I
Sbjct: 512 TFLAILSACSHAGLVDDG--LYHF--------------------------NQMINVYGII 543

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P      Y+ +I   G+ G    A  + +S     I  D      + SAC     +D G+
Sbjct: 544 PRIEH--YSCLITLLGRAGRLHEAYEILQSNP--EISDDFQLLSTLFSACRLHKNLDLGV 599

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           +I + +  +     ST  Y  +++M    GK
Sbjct: 600 EIAENLIDKDPDDSST--YIILSNMYASFGK 628



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 92/188 (48%), Gaps = 20/188 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  +F  + + TTV WN +I G+V     ++A+ L+ +M KS  +   D  T++S
Sbjct: 357 GKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKS--FVEPDAITFTS 414

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC++   L  G+ +H   +      +  V  +LL+MY+ C +           VE  
Sbjct: 415 VLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGA-----------VEEA 463

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           +        VF  +  R++V+W ++++ Y    R  EA+  F  ML+  ++P  ++F+ +
Sbjct: 464 FG-------VFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAI 516

Query: 233 FPALSSLG 240
             A S  G
Sbjct: 517 LSACSHAG 524


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 225/759 (29%), Positives = 381/759 (50%), Gaps = 70/759 (9%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F++I + + VI  T  +G     L Y  +    Q K     T+ D+  Y  + +  A++ 
Sbjct: 12  FNNIAQESLVILITKQVG-----LGYRFLSSLCQPKN----TALDSEAYKKLFQTAAKSG 62

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           +L +GK  H H ++   NP  ++ N+LLNMY  C              E+ +++     +
Sbjct: 63  SLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCR-------------ELGFAR-----Q 104

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M  RN++++N+++S Y +   Y +A+  F       ++    ++           D
Sbjct: 105 LFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCD 164

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                +++GL+V  G      +F+ +  I MY++ G  D A  +FD C ER+   WN++I
Sbjct: 165 LDFGKLLHGLVVVNG--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLI 222

Query: 302 GGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            GYV+     E + L  ++    L+L       V     ++    L E   G  +H Y  
Sbjct: 223 SGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEK--GMAIHCYAA 280

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD---- 393
           K  +   ++V  A+++                    ++VV++N MIS F+Q  +DD    
Sbjct: 281 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQ--MDDITDE 338

Query: 394 ---EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMES 449
              E   L  EMQ++G      T + +L A S  +  + G+Q HA + ++     E + S
Sbjct: 339 ASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 398

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI++YA  G  +   Q F    +  +D A+W ++I  + QN  LE AF  FRQ+    +
Sbjct: 399 ALIELYALMGSTEDGMQCFA--STSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPI 456

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
            P   T++ ++ AC     +  G+Q+ G++I+  +D    V TS I MY+KSG +  A  
Sbjct: 457 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANK 516

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF ++   +  TY+ MI    QHG +  AL++F SMK  GI+P+   F+ VL AC + GL
Sbjct: 517 VFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGL 576

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V  G+  F  M+  Y I P+ +H+ C+AD+LGR G++ +A   +   G + + + +W +L
Sbjct: 577 VTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPV-MWRAL 635

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L SCR++  S + + VA++L+E++   S  G +VLL NIY + G   + ++VR+ MR+RG
Sbjct: 636 LSSCRVYKDSVIGKRVAERLMELEPEAS--GSYVLLHNIYNDSGVNSSAEEVRELMRDRG 693

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           ++KE   SWI +G   + FA  D  HP S  IY ML+ +
Sbjct: 694 VKKEPALSWIVLGNQTHSFAVADWSHPSSQMIYTMLDTM 732



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/551 (25%), Positives = 247/551 (44%), Gaps = 55/551 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+      ARQLFD +     + +N++I G+       +A+ L+ + +  +     D +T
Sbjct: 94  CKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDN--LKLDKFT 151

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+  L  C E  +L  GK +H   +    +   F+ N L++MYS C              
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKC-------------- 197

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                K D    +FD    R+ V+WN+++S YV+     E +     M R G++ +T + 
Sbjct: 198 ----GKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYAL 253

Query: 230 VNVFPALS---SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +V  A     + G  +    ++    KLG E+  D+ V ++ + MYA+ G    A K+F
Sbjct: 254 GSVLKACCINLNEGLMEKGMAIHCYAAKLGMEF--DIVVRTALLDMYAKNGSLKEAIKLF 311

Query: 287 DNCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
                +N   +N MI G++Q     +    EA +LF++ ++   +     TF   L A S
Sbjct: 312 SLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFME-MQRRGLEPSPSTFSVVLKACS 370

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVIVLNAVI--------------ERDVVSWNT 381
             + L+ G+Q+HA I KN      F+   +I L A++              ++D+ SW +
Sbjct: 371 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 430

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I   VQN   +    L  ++       +  TV+ ++SA ++      G+Q   Y ++ G
Sbjct: 431 IIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 490

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           I  +  +++  I MYAKSG +  A ++F   +  + D AT++AMI+   Q+G   +A   
Sbjct: 491 IDAYTSVKTSSISMYAKSGNMPLANKVFI--EVQNPDVATYSAMISSLAQHGSAHDALNI 548

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           F  M    + PN      VL AC   G +  G          Y ++ N    T L D+  
Sbjct: 549 FESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLG 608

Query: 560 KSGVINYAANV 570
           ++G ++ A N+
Sbjct: 609 RTGRLSDAENL 619



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 200/476 (42%), Gaps = 78/476 (16%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A  LFD       V WN++I G+V      E + L ++M ++    +   Y   S
Sbjct: 198 GKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLT--TYALGS 255

Query: 113 VLKACAETRN---LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           VLKAC    N   +  G A+HC+  +        V  +LL+MY+   S  +A        
Sbjct: 256 VLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEA-------- 307

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----ERYVEAVRQFRMMLRMGIRP 224
                      K+F  M  +NVV +N ++S +++      E   EA + F  M R G+ P
Sbjct: 308 ----------IKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEP 357

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           S  +F  V  A S+    +    ++ L+ K  + + +D F+ S+ I +YA +G  +   +
Sbjct: 358 SPSTFSVVLKACSAAKTLEYGRQIHALICK--NNFQSDEFIGSALIELYALMGSTEDGMQ 415

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F +  +++   W ++I  +VQN     A +LF Q+     I  ++ T    +SA +   
Sbjct: 416 CFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFS-SPIRPEEYTVSLMMSACADFA 474

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMIS 384
            L  G+Q+  Y IK+ +     V  + I                      DV +++ MIS
Sbjct: 475 ALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMIS 534

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-H 443
           +  Q+G   + L +   M+ +G   +      +L A             H  L+ HG+ +
Sbjct: 535 SLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIAC-----------CHGGLVTHGVNY 583

Query: 444 FEGME-SY-----------LIDMYAKSGLIKTARQIFEKNDSGDRDQ-ATWNAMIA 486
           F+ M+ SY           L D+  ++G +  A  +     SG +D    W A+++
Sbjct: 584 FQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLIL--SSGFQDHPVMWRALLS 637


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 200/644 (31%), Positives = 325/644 (50%), Gaps = 77/644 (11%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS-L 239
           K+F+ + + +V +W  ++S + +     + +  F  M   G+ P+  +   V  + SS +
Sbjct: 342 KMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNV 401

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            D +    ++G +++ G +   D  + +S +  Y +  CF +A K+F    E++T  WN 
Sbjct: 402 NDSRIGKGIHGWILRNGLDL--DAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNI 459

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           M+  Y+Q     ++++LF Q                                        
Sbjct: 460 MMSSYLQIGDMQKSVDLFRQ---------------------------------------- 479

Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
              LP         +D  SWNTMI   ++NG +   L L+Y+M   G   + +T +  L 
Sbjct: 480 ---LP--------GKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALV 528

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF---------- 468
            AS+L    +GKQ H  +L+ G+  +G + + LIDMY K G ++ A  IF          
Sbjct: 529 LASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMM 588

Query: 469 ---EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
              E  D    +  +W++M++GY QNG  E+A   F  M+   V  +  T+ SV+ AC  
Sbjct: 589 NSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACAS 648

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
            G +ELG+Q+HG+  +     +VF+G+S+IDMY K G +N A  +F +  ++N V +T+M
Sbjct: 649 AGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSM 708

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I G   HG    A+ LF  M   GI P+ ++FV VL+ACS+AGL++EG + F LM++ Y 
Sbjct: 709 ISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYG 768

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I+P  EH+ C+ D+ GR G++ E  EF+        +  +W S L SCR+H + E+   V
Sbjct: 769 IRPGAEHFTCMVDLYGRAGRLNEIKEFIHN-NAISKLSSVWRSFLSSCRVHKNIEMGIWV 827

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
            KKLLE++  ++ P  ++L S+I A E  WE   K+R  M++RG++K    SWI +   V
Sbjct: 828 CKKLLELEPFDAGP--YILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQV 885

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATP 809
           + F   D+ HPQ  KIY  L+ L   ++  G  T      D TP
Sbjct: 886 HSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYST------DVTP 923



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 219/505 (43%), Gaps = 67/505 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN-YTYSSVLKA 116
           A ++F+ I +     W  +I GF    L  + + L+++M+       C N +T S VLK+
Sbjct: 340 AHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV---CPNQFTLSIVLKS 396

Query: 117 CAETRN-LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           C+   N  RIGK +H   +R   +    + NS+L+ Y  C     AE +     E D   
Sbjct: 397 CSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVS 456

Query: 176 YDLVC----------KVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
           ++++           K  D  R+   ++  +WNT++   ++      A+     M+  G 
Sbjct: 457 WNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGP 516

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
             + ++F       SSL        ++  ++K+G   ++D FV +S I MY + G  + A
Sbjct: 517 AFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVG--VLDDGFVRNSLIDMYCKCGEMEKA 574

Query: 283 RKIF-------------DNCLERNTE--VWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
             IF             ++C +   E   W++M+ GYVQN    +A++ F   +   ++ 
Sbjct: 575 SVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF-SFMICSQVE 633

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV--------------------IV 367
            D  T  S +SA +    L+LG+Q+H YI K    L V                    ++
Sbjct: 634 VDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLI 693

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
            N   +R+VV W +MIS    +G   E + L   M  +G   + V+   +L+A S+    
Sbjct: 694 FNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLL 753

Query: 428 DVGKQ-----THAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           + G +        Y +R G  HF  M    +D+Y ++G +   ++ F  N++  +  + W
Sbjct: 754 EEGCKYFRLMREVYGIRPGAEHFTCM----VDLYGRAGRLNEIKE-FIHNNAISKLSSVW 808

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLE 506
            + ++    +  +E      +++LE
Sbjct: 809 RSFLSSCRVHKNIEMGIWVCKKLLE 833



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 8/304 (2%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   Q G    +  LF  +       WNT+I G + N     A+ L  +M  + P  + 
Sbjct: 461 MSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGP--AF 518

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +  T+S  L   +    L +GK +H   ++       FV NSL++MY  C   ++   V 
Sbjct: 519 NKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKC-GEMEKASVI 577

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
            K++  + S  +      D +     V+W+++VS YV+  R+ +A++ F  M+   +   
Sbjct: 578 FKHLPQESSMMNSEESCDDAVVES--VSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVD 635

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +  +V  A +S G  +    V+G + K+G     D+F+ SS I MY + G  + A  I
Sbjct: 636 KFTLTSVVSACASAGVLELGRQVHGYIQKIGHGL--DVFLGSSIIDMYVKCGSLNDAWLI 693

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+   +RN  +W +MI G   +    EA+ LF +++  + I  ++V+F+  L+A S    
Sbjct: 694 FNQAKDRNVVLWTSMISGCALHGQGREAVRLF-ELMINEGITPNEVSFVGVLTACSHAGL 752

Query: 346 LDLG 349
           L+ G
Sbjct: 753 LEEG 756



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 109/195 (55%), Gaps = 9/195 (4%)

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           ++  S + N  N +V    HA L+++G +   G  ++L+++YAKS  ++ A ++FE  + 
Sbjct: 295 SSTFSDSMNYPNSEV---LHAKLIKNGCVGIRG--NHLLNLYAKSQNLEQAHKMFE--EI 347

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP-MGNIELG 532
              D  +W  +I+G+ + GL  +    F +M +  V PN  T++ VL +C+  + +  +G
Sbjct: 348 PQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIG 407

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           K +HG+ +R  LD +  +  S++D Y K     YA  +F  + EK++V++  M+  Y Q 
Sbjct: 408 KGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQI 467

Query: 593 GMSERALSLFRSMKG 607
           G  ++++ LFR + G
Sbjct: 468 GDMQKSVDLFRQLPG 482



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 144/323 (44%), Gaps = 52/323 (16%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVI------------ 72
           QIH+    +  L    +R+ L  + C+ G    A  +F  + + ++++            
Sbjct: 541 QIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVE 600

Query: 73  ---WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAV 129
              W++++ G+V N    +A+  +S M  S      D +T +SV+ ACA    L +G+ V
Sbjct: 601 SVSWSSMVSGYVQNGRFEDALKTFSFMICSQ--VEVDKFTLTSVVSACASAGVLELGRQV 658

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           H +  +       F+ +S+++MY  C S  DA ++                  F+  + R
Sbjct: 659 HGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLI------------------FNQAKDR 700

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG-------DY 242
           NVV W +++S      +  EAVR F +M+  GI P+ +SFV V  A S  G        +
Sbjct: 701 NVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYF 760

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK-IFDNCLERNTEVWNTMI 301
           +    VYG  ++ G+E+       +  + +Y   G  +  ++ I +N + + + VW + +
Sbjct: 761 RLMREVYG--IRPGAEHF------TCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFL 812

Query: 302 GGYVQNNHPVEAIELFVQVLELD 324
                + +    I +  ++LEL+
Sbjct: 813 SSCRVHKNIEMGIWVCKKLLELE 835



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 44/75 (58%)

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           G  L+++Y+KS  +  A  +F +IP+ +  ++T +I G+ + G+S   L LF  M+  G+
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 611 EPDAITFVAVLSACS 625
            P+  T   VL +CS
Sbjct: 384 CPNQFTLSIVLKSCS 398


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 219/761 (28%), Positives = 367/761 (48%), Gaps = 50/761 (6%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A++LF  +     V W  +++    N    EA+  Y QM++      C+   +++V+  C
Sbjct: 400  AQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG--VPCNANAFATVVSLC 457

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                N   G  V    I         V NSL+ M+       DAE               
Sbjct: 458  GSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAE--------------- 502

Query: 178  LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               K+FD M   + ++WN ++S Y       +    F  M   G+RP   +  ++    +
Sbjct: 503  ---KLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559

Query: 238  SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            S   +     ++ L ++  S   + + V ++ + MY+  G    A  +F N   R+   W
Sbjct: 560  SSDHFSHGSGIHSLCLR--SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 617

Query: 298  NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            NTMI  YVQN +  +A++   Q+   +E   + +TF SAL A S    L  G+ +HA ++
Sbjct: 618  NTMISSYVQNCNSTDALKTLGQLFHTNESP-NHLTFSSALGACSSPGALIDGKMVHAIVL 676

Query: 358  KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
            +  +   ++V N++I                      D+VS+N +I  +       + + 
Sbjct: 677  QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQ 736

Query: 398  LVYEMQKQGFMIDSVTVTALL-SAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMY 455
            +   M+  G   + +T+  +  S AS+    + G+  HAY++R G +  E + + LI MY
Sbjct: 737  VFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMY 796

Query: 456  AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            AK G ++++  IF  N   +++  +WNA+IA   Q G  EEA   F  M       + V 
Sbjct: 797  AKCGNLESSTNIF--NSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVC 854

Query: 516  IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            +A  L +C  + ++E G QLHG  ++  LD + +V  + +DMY K G ++    V     
Sbjct: 855  LAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQA 914

Query: 576  EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
             +    + T+I GY ++G  + A   F+ M   G +PD +TFVA+LSACS+AGLVD+G+ 
Sbjct: 915  IRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGID 974

Query: 636  IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
             ++ M   + + P  +H  C+ D+LGR+G+  EA +F++E+    N L IW SLL S R 
Sbjct: 975  YYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDL-IWRSLLSSSRT 1033

Query: 696  HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
            H + E+    AKKLLE+D  +     +VLLSN+YA    W +VDK+R  M+   + K   
Sbjct: 1034 HKNLEIGRKTAKKLLELDPFDDSA--YVLLSNLYATNARWADVDKLRSHMKTININKRPA 1091

Query: 756  CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            CSW+ +   V+ F   D+ H  + KIY  L+ + +++R  G
Sbjct: 1092 CSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 1132



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 241/505 (47%), Gaps = 53/505 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR H A +LFD +    T+ WN +I  +    +  +  L++S M+        D  T  S
Sbjct: 496 GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP--DATTLCS 553

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++  CA + +   G  +H   +R   + S  V N+L+NMYS      DAE          
Sbjct: 554 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF--------- 604

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F  M RR++++WNT++S YV+     +A++    +      P+ ++F + 
Sbjct: 605 ---------LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 655

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A SS G      +V+ ++++L  +   +L V +S I MY +    + A K+F +    
Sbjct: 656 LGACSSPGALIDGKMVHAIVLQLSLQ--RNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL-DLGQQ 351
           +   +N +IGGY       +A+++F   +    I  + +T ++   + +   +L + G+ 
Sbjct: 714 DIVSYNVLIGGYAVLEDGTKAMQVF-SWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 772

Query: 352 LHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGL 391
           LHAYII+       +VA  +I              + N++  +++VSWN +I+A VQ G 
Sbjct: 773 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 832

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
            +E L L  +MQ  G  +D V +   LS+ ++L + + G Q H   ++ G+     +SY+
Sbjct: 833 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL---DSDSYV 889

Query: 452 I----DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +    DMY K G +    Q+    D   R Q  WN +I+GY + G  +EA   F+QM+  
Sbjct: 890 VNAAMDMYGKCGKMDEMLQVVP--DQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAT 947

Query: 508 NVTPNVVTIASVLPACNPMGNIELG 532
              P+ VT  ++L AC+  G ++ G
Sbjct: 948 GRKPDYVTFVALLSACSHAGLVDKG 972



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 210/463 (45%), Gaps = 29/463 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG- 240
           +FD M  R    W T VS  V+   + +A    R M   G+  S  +  ++  A    G 
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 241 --DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
                    ++ L  + G   + ++++ ++ + +Y   G    A+++F    ERN   W 
Sbjct: 359 DEGIACGAAIHALTHRAG--LMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWT 416

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            ++     N +  EA+  + Q +  D +  +   F + +S    L+    G Q+ + +I 
Sbjct: 417 ALMVALSSNGYLEEALRAYRQ-MRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIV 475

Query: 359 NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLML 398
           + +   V V N++I                    E D +SWN MIS +   G+  +  ++
Sbjct: 476 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 535

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
             +M+  G   D+ T+ +L+S  ++  +   G   H+  LR  +     + + L++MY+ 
Sbjct: 536 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 595

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
           +G +  A  +F   +   RD  +WN MI+ Y QN    +A     Q+   N +PN +T +
Sbjct: 596 AGKLSDAEFLFW--NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFS 653

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           S L AC+  G +  GK +H   ++  L +N+ VG SLI MY K   +  A  VF  +P  
Sbjct: 654 SALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           + V+Y  +I GY       +A+ +F  M+  GI+P+ IT + +
Sbjct: 714 DIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 756



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 14/220 (6%)

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG--- 527
           ++  DR  +TW   ++G  + G   +AF   R M E  V  +   +AS++ AC   G   
Sbjct: 301 DEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDE 360

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
            I  G  +H  + R  L  NV++GT+L+ +Y   G+++ A  +F ++PE+N V++T +++
Sbjct: 361 GIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMV 420

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ-----IFDLMQQ 642
               +G  E AL  +R M+  G+  +A  F  V+S C        GLQ     I   +Q 
Sbjct: 421 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 480

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           +  +  S      +  M G +G+V +A +    + E   +
Sbjct: 481 QVSVANS------LITMFGNLGRVHDAEKLFDRMEEHDTI 514



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG--- 527
           ++  DR  +TW   ++G  + G    AF   R M E  V  +   +AS++ AC   G   
Sbjct: 78  DEMADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDE 137

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
            I  G  +H  + R  L  NV++G +L+ +
Sbjct: 138 GIACGAAIHALTHRAGLMGNVYIGRALLHL 167


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 197/581 (33%), Positives = 299/581 (51%), Gaps = 60/581 (10%)

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L +  D K+   V+  ++     Y + L V    +  YA L     ARK+FD   ERN  
Sbjct: 50  LDTYPDLKTLRTVHSRIISEDLRYNSSLGV--KLMRAYASLKDVATARKVFDEIPERNVI 107

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           + N MI  YV N    E I++F  +     +  D  TF   L A S    + +G+++H  
Sbjct: 108 IINVMIRSYVNNGFYREGIQVFGTMCSC-HVKPDHYTFPCVLKACSCSGNIVIGKKIHGS 166

Query: 356 IIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
             K                     F++   +VL+ +  RDVVSWN++++ + QN   D+ 
Sbjct: 167 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDA 226

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L +  EM+      D+ T+ +LL A SN   ++V                    Y+ DM+
Sbjct: 227 LEVCREMESVKISHDAGTMASLLPAVSNTTTENV-------------------MYVKDMF 267

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G                +   +WN MI  Y +N +  EA   +  M      P+ V+
Sbjct: 268 FKMG---------------KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVS 312

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           I SVLPAC     + LGK++HG+  R  L  N+ +  +LIDMY+K G ++ A +VF  + 
Sbjct: 313 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMK 372

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ V++T MI  YG  G    A++LF  M+  G+ PD+I FV  L+ACS+AGL++EG  
Sbjct: 373 SRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 432

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            F LM   YKI P  EH  C+ D+LGR GKV EAY+F++E+  E N   +WG+LLG+CR+
Sbjct: 433 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNE-RVWGALLGACRV 491

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H ++++  + A KL ++    S  GY+VLLSNIYA+ G WE V  +R  M+ +GL+K  G
Sbjct: 492 HSNTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 549

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            S ++V   ++ F   D+ HPQS +IY  L+ L  +M+  G
Sbjct: 550 ASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELG 590



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 220/467 (47%), Gaps = 24/467 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD +  RNV+  N ++  YV    Y E ++ F  M    ++P   +F  V  A S  G
Sbjct: 96  KVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSG 155

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           +      ++G   K+G    + LFV +  + MY + G    AR + D    R+   WN++
Sbjct: 156 NIVIGKKIHGSATKVG--LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 213

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY QN    +A+E+  + +E  +I  D  T  S L AVS     ++      Y+   F
Sbjct: 214 VAGYAQNQRFDDALEV-CREMESVKISHDAGTMASLLPAVSNTTTENV-----MYVKDMF 267

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
             +         ++ +VSWN MI  +++N +  E + L   M+  GF  D+V++T++L A
Sbjct: 268 FKMG--------KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPA 319

Query: 421 ASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
             +     +GK+ H Y+ R   I    +E+ LIDMYAK G +  AR +FE   S  RD  
Sbjct: 320 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKS--RDVV 377

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF- 538
           +W AMI+ Y  +G   +A   F +M +  + P+ +   + L AC+  G +E G+      
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSER 597
           +  Y +   +     ++D+  ++G +  A     ++P E N   +  ++     H  ++ 
Sbjct: 438 TDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTD- 496

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSAC-SYAGLVDEGLQIFDLMQQE 643
            + L  + K   + P+   +  +LS   + AG  +E   I ++M+ +
Sbjct: 497 -IGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSK 542



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 206/452 (45%), Gaps = 79/452 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     +I N +I  +V N    E I ++  M   S +   D+YT+  VLKAC
Sbjct: 94  ARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTM--CSCHVKPDHYTFPCVLKAC 151

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           + + N+ IGK +H    +   + + FV N L++MY  C    +A +              
Sbjct: 152 SCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL-------------- 197

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               V D M RR+VV+WN++V+ Y + +R+ +A+   R M  + I     +  ++ PA+S
Sbjct: 198 ----VLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 253

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              +  + +V+          YV D+F              F   +K   +        W
Sbjct: 254 ---NTTTENVM----------YVKDMF--------------FKMGKKSLVS--------W 278

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MIG Y++N  PVEA+EL+   +E D    D V+  S L A      L LG+++H YI 
Sbjct: 279 NVMIGVYMKNAMPVEAVELY-SGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 337

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   +++ NA+I+                    RDVVSW  MISA+  +G   + + 
Sbjct: 338 RKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 397

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  +MQ  G + DS+     L+A S+    + G+     +  H      +E  + ++D+ 
Sbjct: 398 LFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 457

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++G +K A +  ++    + ++  W A++  
Sbjct: 458 GRAGKVKEAYKFIQEMPM-EPNERVWGALLGA 488


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/508 (36%), Positives = 303/508 (59%), Gaps = 37/508 (7%)

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI------- 366
           +E+ +Q LE++   +D V  L+   + + ++E   GQ++HA++IK     PV        
Sbjct: 466 LEMGIQGLEVEFQGYDSV--LTECISQTAIRE---GQRVHAHMIKTCYEPPVYLRTRLIV 520

Query: 367 -------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
                        VL+ + ER+VVSW  MIS + Q G   E L L  EM   G   +  T
Sbjct: 521 LYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 580

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK 470
              +L++ ++     +G+Q H+ +++    FE    + S L+DMYAK+G I  AR++F+ 
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIK--TSFESHIFVGSSLLDMYAKAGKICEARRVFDG 638

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               +RD  +  A+I+GY Q GL EEA   FR++    +  N VT ASVL A + +  ++
Sbjct: 639 LP--ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            G+Q+H   +R  L   V +  SLIDMYSK G + Y+  +F  +PE+  +++  M++GY 
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756

Query: 591 QHGMSERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQP 648
           +HG+   A+ LF+ MK    ++PD++TF+AVLS CS+ G+ D GL+IF +++ Q+   +P
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             EHY CV D+ GR G+V EA+EF+K++  E     IWGSLLG+CR+H +  + E VA++
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTA-AIWGSLLGACRVHQNVHIGEFVARR 875

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           LLE+++ N+  G +V+LSN+YA  G W++V  VR+ M+E+ + KE G SWI++   ++ F
Sbjct: 876 LLEIESENA--GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTF 933

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            + D+ HP+  +++  +  L+++++ AG
Sbjct: 934 HASDRSHPRKEEVFAKVRELSIKIKEAG 961



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 203/411 (49%), Gaps = 45/411 (10%)

Query: 212 RQFR-MMLRMGIRPSTISFVNVFPALS---SLGDYKSADVVYGLLVKLGSEYVNDLFVAS 267
           RQ +  +L MGI+   + F      L+   S    +    V+  ++K  + Y   +++ +
Sbjct: 459 RQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIK--TCYEPPVYLRT 516

Query: 268 SAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV 327
             I +Y +  C   AR++ D   ERN   W  MI GY Q  +  EA+ LFV++L +    
Sbjct: 517 RLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEML-MSGTA 575

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------V 367
            ++ TF + L++ +      LG+Q+H+ +IK       FV   ++              V
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 635

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
            + + ERDVVS   +IS + Q GLD+E L L   +Q++G   + VT  ++L+A S L   
Sbjct: 636 FDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAAL 695

Query: 428 DVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
           D G+Q H+++LR  + F   +++ LIDMY+K G +  +R+IF+     +R   +WNAM+ 
Sbjct: 696 DHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP--ERTVISWNAMLV 753

Query: 487 GYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELG--------KQLHG 537
           GY+++GL  EA   F+ M E N V P+ VT  +VL  C+  G  + G         Q  G
Sbjct: 754 GYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDG 813

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           F      +  +     ++D++ ++G +  A     K+P + +      +LG
Sbjct: 814 F------EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 858



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 231/485 (47%), Gaps = 62/485 (12%)

Query: 56  HLARQLFDSITRP--------TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
           H  +Q+  SI+ P        +T   N+  +  +C+N   +  LL   ++        + 
Sbjct: 422 HRPKQVLSSISNPFSRQRILLSTFPANSPDLKTLCSNRQLKEALLEMGIQG----LEVEF 477

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
             Y SVL  C     +R G+ VH H I+    P  ++   L+ +Y+ C    DA      
Sbjct: 478 QGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR----- 532

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                        +V D M  RNVV+W  ++S Y +     EA+  F  ML  G  P+  
Sbjct: 533 -------------RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEF 579

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F  V  + +S   ++    ++ L++K  + + + +FV SS + MYA+ G    AR++FD
Sbjct: 580 TFATVLTSCTSSSGFQLGRQIHSLVIK--TSFESHIFVGSSLLDMYAKAGKICEARRVFD 637

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ER+      +I GY Q     EA++LF + L+ + +  + VT+ S L+A+S L  LD
Sbjct: 638 GLPERDVVSCTAIISGYAQLGLDEEALDLF-RRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+Q+H+++++  +   V++ N++I                    ER V+SWN M+  + 
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756

Query: 388 QNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
           ++GL  E + L   M+++  +  DSVT  A+LS  S+   +D G +    ++     FE 
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 446 GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG--YTQNGLLEEAFVAF 501
            +E Y  ++D++ ++G ++ A + F K    +   A W +++      QN  + E FVA 
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFE-FIKKMPFEPTAAIWGSLLGACRVHQNVHIGE-FVA- 873

Query: 502 RQMLE 506
           R++LE
Sbjct: 874 RRLLE 878



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 195/418 (46%), Gaps = 41/418 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++ D +     V W  +I G+       EA+ L+ +M  S   T+ + +T+++VL +C
Sbjct: 531 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSG--TAPNEFTFATVLTSC 588

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             +   ++G+ +H   I+       FV +SLL+MY+      +A                
Sbjct: 589 TSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEAR--------------- 633

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD +  R+VV+   I+S Y +     EA+  FR + R G+R + +++ +V  ALS
Sbjct: 634 ---RVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 690

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        V+  +++    +   + + +S I MY++ G   ++R+IFD+  ER    W
Sbjct: 691 GLAALDHGRQVHSHVLRAKLPFY--VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 748

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+ GY ++    EA+ELF  + E +++  D VTFL+ LS  S     D G ++   ++
Sbjct: 749 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 808

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                          E ++  +  ++  F + G  +E    + +M    F   +    +L
Sbjct: 809 NQ---------KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP---FEPTAAIWGSL 856

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGL---IKTARQIFEK 470
           L A    +N  +G+     LL   I  E   +Y+I  ++YA +G    ++T R++ ++
Sbjct: 857 LGACRVHQNVHIGEFVARRLLE--IESENAGNYVILSNLYASAGRWDDVRTVRELMKE 912



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 36/265 (13%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           ++  KIC+      AR++FD +     V    II G+    L  EA+ L+ ++++    +
Sbjct: 624 AKAGKICE------ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS 677

Query: 104 SCDNY-TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
              NY TY+SVL A +    L  G+ VH H +R        + NSL++MYS C S     
Sbjct: 678 ---NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS----- 729

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG- 221
                   + YS+     ++FD+M  R V++WN ++  Y K     EAV  F++M     
Sbjct: 730 --------LTYSR-----RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG---- 277
           ++P +++F+ V    S  G       ++  +V     +  ++      + ++   G    
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836

Query: 278 CFDFARKIFDNCLERNTEVWNTMIG 302
            F+F +K+     E    +W +++G
Sbjct: 837 AFEFIKKM---PFEPTAAIWGSLLG 858


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 212/619 (34%), Positives = 328/619 (52%), Gaps = 69/619 (11%)

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY--KSADVVYGLLVKLGSEYVNDL 263
           R+  AV+Q + ++ + I+    +  NV    +  G    K+ D+ Y  L KL S+   D 
Sbjct: 9   RHFPAVKQLQTLV-LSIQKPKFTQQNVVLTENLCGQILDKNPDIKY--LKKLHSKICIDH 65

Query: 264 FVASSA------IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            + S+       +  YA  G     R IFD   ++N   +N MI  YV NNH      L 
Sbjct: 66  DLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYV-NNHLYSDALLV 124

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            + +    I  D  T+   L A S  ++L +G Q+HA +++  + L V V N +I     
Sbjct: 125 FKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGK 184

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RDVVSWN++++   +NG  D+ L +  EM+  G   D+ T+ +L
Sbjct: 185 CGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASL 244

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           L A +N    +V                   S++ +M+ K                 ++ 
Sbjct: 245 LPAVTNTCLDNV-------------------SFVKEMFMKLA---------------NKS 270

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             +WN MIA Y  N +  EA   F QM +H V P+ ++IASVLPAC  +  + LG+++H 
Sbjct: 271 LVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHE 330

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
           + +R  L  N+ +  +LIDMY+K G + YA  VF ++  ++ V++T+MI  YG +G    
Sbjct: 331 YVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRD 390

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           A+SLF  M+  G+ PD+I FV+VLSACS+AGL+DEG   F LM +E KI P  EH+ C+ 
Sbjct: 391 AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMV 450

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR G+V EAY F+K++  E N   +WG+LL +CR++ +  +  + A +L ++    S
Sbjct: 451 DLLGRAGQVDEAYGFIKQMPMEPNE-RVWGALLSACRVYSNMIIGLLAADQLFQLCPEQS 509

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
             GY+VLLSNIYA+ G WE+V  VR  M+ +G++K  G S  ++   V+ F + DQ HPQ
Sbjct: 510 --GYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQ 567

Query: 778 SHKIYEMLERLAMEMRNAG 796
           S +IYE L+    +M+ AG
Sbjct: 568 SKQIYEELDVSVGKMKEAG 586



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 210/468 (44%), Gaps = 87/468 (18%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           R   +C  G P   R +FD I +   V +N +I  +V N+L  +A+L++  M        
Sbjct: 79  RAYAVC--GEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHG--ID 134

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            D+YTY  VLKA + + +L +G  +H   +R   + + FV N L++MY  C   ++A   
Sbjct: 135 PDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEA--- 191

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                          C+V D M  R+VV+WN++V+   +  ++ +A+   + M  +G++P
Sbjct: 192 ---------------CRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKP 236

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD---F 281
              +  ++ PA+++                                       C D   F
Sbjct: 237 DAGTMASLLPAVTNT--------------------------------------CLDNVSF 258

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
            +++F     ++   WN MI  Y+ N+ P EA+++F+Q +E   +  D ++  S L A  
Sbjct: 259 VKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQ-MEDHAVDPDAISIASVLPACG 317

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L LG+++H Y+++  +   +++ NA+I+                    RDVVSW +
Sbjct: 318 DLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTS 377

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MISA+  NG   + + L   MQ  G   DS+   ++LSA S+    D G+     +    
Sbjct: 378 MISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEEC 437

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                +E +  ++D+  ++G +  A   F K    + ++  W A+++ 
Sbjct: 438 KIVPRIEHFVCMVDLLGRAGQVDEAYG-FIKQMPMEPNERVWGALLSA 484



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 206/412 (50%), Gaps = 29/412 (7%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD + ++NVV +N ++  YV    Y +A+  F+ M   GI P   ++  V  A S   D
Sbjct: 93  IFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSED 152

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                 ++  +V++G +   ++FV +  I MY + GC   A ++ D    R+   WN+++
Sbjct: 153 LWVGMQIHAAVVRVGLDL--NVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLV 210

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            G  +N    +A+E+  + +EL  +  D  T  S L AV+     ++     +++ + F+
Sbjct: 211 AGCARNGQFDDALEV-CKEMELLGLKPDAGTMASLLPAVTNTCLDNV-----SFVKEMFM 264

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
            L          + +VSWN MI+ ++ N +  E + +  +M+      D++++ ++L A 
Sbjct: 265 KLA--------NKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            +L    +G++ H Y++R  +     +E+ LIDMYAK G ++ AR++F++     RD  +
Sbjct: 317 GDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF--RDVVS 374

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           W +MI+ Y  NG   +A   F +M +  + P+ +   SVL AC+  G ++ G+    +  
Sbjct: 375 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR----YYF 430

Query: 541 RYLLDQNVFVG-----TSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
           + + ++   V        ++D+  ++G ++ A     ++P E N   +  ++
Sbjct: 431 KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALL 482


>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
 gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 201/626 (32%), Positives = 333/626 (53%), Gaps = 34/626 (5%)

Query: 190  NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
            +V AWN  +   V     VE++  FR M R G  P+  +F  V  A + L D    ++V+
Sbjct: 622  SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681

Query: 250  GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
              L+K  S + +D+FV ++ + M+ +    D+A K+F+   ER+   WN M+ G+ Q+ H
Sbjct: 682  AHLIK--SPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 739

Query: 310  PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              +A  LF + + L+EI  D VT ++ + + S  + L L + +HA  I+  V + V V N
Sbjct: 740  TDKAFSLFRE-MRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 798

Query: 370  AVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
              I                      +R VVSWN+M  A+   G   +   L   M ++ F
Sbjct: 799  TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 858

Query: 408  MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTAR 465
              D  T   L ++  N      G+  H++ +  G     E + ++ I MY+KS    +AR
Sbjct: 859  KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF-ISMYSKSEDTCSAR 917

Query: 466  QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
             +F+   S  R   +W  MI+GY + G ++EA   F  M++    P++VT+ S++  C  
Sbjct: 918  LLFDIMTS--RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 975

Query: 526  MGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             G++E GK +   +  Y   + NV +  +LIDMYSK G I+ A ++F   PEK  VT+TT
Sbjct: 976  FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 1035

Query: 585  MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
            MI GY  +G+   AL LF  M     +P+ ITF+AVL AC+++G +++G + F +M+Q Y
Sbjct: 1036 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 1095

Query: 645  KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
             I P  +HY C+ D+LGR GK+ EA E ++ +  + +   IWG+LL +C++H + ++AE 
Sbjct: 1096 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA-GIWGALLNACKIHRNVKIAEQ 1154

Query: 705  VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
             A+ L  ++ + + P  +V ++NIYA  G W+   ++R  M++R ++K  G S I V G 
Sbjct: 1155 AAESLFNLEPQMAAP--YVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 1212

Query: 765  VNRFASKDQEHPQSHKIYEMLERLAM 790
             + F   +  H ++  IY  L  L++
Sbjct: 1213 NHSFTVGEHGHVENEVIYFTLNGLSL 1238



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 264/576 (45%), Gaps = 82/576 (14%)

Query: 73   WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
            WN  I   V  N P E++LL+ +MK+       +N+T+  V KACA   ++   + VH H
Sbjct: 626  WNLQIREAVNRNDPVESLLLFREMKRGG--FEPNNFTFPFVAKACARLADVGCCEMVHAH 683

Query: 133  FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
             I+       FV  + ++M+  C S             VDY+      KVF+ M  R+  
Sbjct: 684  LIKSPFWSDVFVGTATVDMFVKCNS-------------VDYA-----AKVFERMPERDAT 725

Query: 193  AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
             WN ++S + ++    +A   FR M    I P +++ + +  + S     K  + ++ + 
Sbjct: 726  TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 785

Query: 253  VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NCLERNTEVWNTMIGGYVQNNHP 310
            ++LG +    + VA++ I  Y + G  D A+ +F+  +  +R    WN+M   Y      
Sbjct: 786  IRLGVDV--QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 843

Query: 311  VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY-----------IIKN 359
             +A  L+  +L  +E   D  TF++  ++    + L  G+ +H++            I  
Sbjct: 844  FDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINT 902

Query: 360  FVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
            F+++           ++ + +  R  VSW  MIS + + G  DE L L + M K G   D
Sbjct: 903  FISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPD 962

Query: 411  SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIF 468
             VT+ +L+S      + + GK   A    +G   + +   + LIDMY+K G I  AR IF
Sbjct: 963  LVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 1022

Query: 469  EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
              +++ ++   TW  MIAGY  NG+  EA   F +M++ +  PN +T  +VL AC   G+
Sbjct: 1023 --DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 1080

Query: 529  IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
            +E      G+   +++ Q          +Y+ S  +++               Y+ M+  
Sbjct: 1081 LE-----KGWEYFHIMKQ----------VYNISPGLDH---------------YSCMVDL 1110

Query: 589  YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             G+ G  E AL L R+M     +PDA  + A+L+AC
Sbjct: 1111 LGRKGKLEEALELIRNMSA---KPDAGIWGALLNAC 1143



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 206/454 (45%), Gaps = 51/454 (11%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A ++F+ +       WN ++ GF  +    +A  L+ +M+ +    + D+ T  +++++ 
Sbjct: 712  AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE--ITPDSVTVMTLIQSA 769

Query: 118  AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +  ++L++ +A+H   IR   +    V N+ ++ Y  C   LD+  +             
Sbjct: 770  SFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC-GDLDSAKL------------- 815

Query: 178  LVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                VF+ + R  R VV+WN++   Y       +A   + +MLR   +P   +F+N+  +
Sbjct: 816  ----VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 871

Query: 236  LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
              +        +++   + LG++   D+   ++ I MY++      AR +FD    R   
Sbjct: 872  CQNPETLTQGRLIHSHAIHLGTD--QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCV 929

Query: 296  VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
             W  MI GY +     EA+ LF  +++  E   D VT LS +S   +   L+ G+ + A 
Sbjct: 930  SWTVMISGYAEKGDMDEALALFHAMIKSGEKP-DLVTLLSLISGCGKFGSLETGKWIDAR 988

Query: 356  I-IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
              I       V++ NA+I                    E+ VV+W TMI+ +  NG+  E
Sbjct: 989  ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 1048

Query: 395  GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--L 451
             L L  +M    +  + +T  A+L A ++  + + G + + ++++   +   G++ Y  +
Sbjct: 1049 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCM 1107

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            +D+  + G ++ A ++  +N S   D   W A++
Sbjct: 1108 VDLLGRKGKLEEALELI-RNMSAKPDAGIWGALL 1140



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 53   GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
            G  H AR +FD+    T V W T+I G+  N +  EA+ L+S+M         ++ T+ +
Sbjct: 1013 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD--YKPNHITFLA 1070

Query: 113  VLKACAETRNLRIG 126
            VL+ACA + +L  G
Sbjct: 1071 VLQACAHSGSLEKG 1084


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 224/764 (29%), Positives = 374/764 (48%), Gaps = 89/764 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            +A+ LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V 
Sbjct: 88  EIAQVLFSKLRVRNVFSW-AAIIGVKCRIGLGEGALMGFVEMLENGIFP--DNFVVPNVC 144

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC   +  R G+ VH +  +   +   FV +SL +MY  C    DA             
Sbjct: 145 KACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDAR------------ 192

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVFD +  RN VAWN ++  YV+     EA+R    M + GI P+ ++      
Sbjct: 193 ------KVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLS 246

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++G  +     + + +  G E  N   + +S +  Y ++G  ++A  IFD  +E++ 
Sbjct: 247 ASANMGGIEEGKQSHAIAIVNGLELDN--ILGTSILNFYCKVGLIEYAEMIFDGMIEKDV 304

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ     EAI +  Q++  + + FD VT  + +SA +  Q L LG+++  
Sbjct: 305 VTWNLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQC 363

Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
           Y I++ +   ++                    V ++ +++D++ WNT++SA+  +GL  E
Sbjct: 364 YCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGE 423

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L YEMQ +    + +T   ++ +                LLR+G   E  E +L   
Sbjct: 424 ALRLFYEMQLESVPPNVITWNLIILS----------------LLRNGQVNEAKEMFL--Q 465

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
              SG+                +  +W  M+ G  QNG  EEA +  R+M E  + PN  
Sbjct: 466 MQSSGIFP--------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAF 511

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF---VGTSLIDMYSKSGVINYAANVF 571
           TI   L AC  + ++  G+ +HG+ IR    Q  F   + TSL+DMY+K G IN A  VF
Sbjct: 512 TITVALSACANLASLHFGRSIHGYIIRN--QQYSFSASIETSLVDMYAKCGDINKAERVF 569

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
                     Y  MI  Y  +G    A++L+RS++  G++PD IT  ++LS C+Y   V+
Sbjct: 570 GSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS-CNYGRDVN 628

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           + +++F  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  + +   +  SL  
Sbjct: 629 QAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQ-SLFE 687

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           SC     +EL E ++K LLE +  NS  G +V++SN YA EG+W+ V K+R+ M+ +GL+
Sbjct: 688 SCSKQHKTELVEYLSKHLLESEPDNS--GNYVMISNAYAVEGSWDEVAKMREMMKVKGLK 745

Query: 752 KEVGCSWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           K+ GCSWI + G    V+ F + D+ H ++ +I  ML  L  +M
Sbjct: 746 KKPGCSWIQIKGEEEGVHVFVANDKTHLRNDEIQRMLALLLYDM 789



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 238/459 (51%), Gaps = 25/459 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A+ +F     RN   W  +
Sbjct: 49  DLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAI 108

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE + I  D+    +   A   LQ    G+ +H Y+ K  
Sbjct: 109 IGVKCRIGLGEGALMGFVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 167

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + +R+ V+WN ++  +VQNG+++E + L+ 
Sbjct: 168 LHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLS 227

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           EM+K+G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + +++ Y K G
Sbjct: 228 EMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVG 287

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF+     ++D  TWN +I+GY Q GL+EEA    + M   N+  + VT++++
Sbjct: 288 LIEYAEMIFD--GMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTL 345

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+ L+ ++ + ++ +DMY+K G I  A  VF    +K+ 
Sbjct: 346 MSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDL 405

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y   G+S  AL LF  M+   + P+ IT+  ++ +    G V+E  ++F L
Sbjct: 406 ILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF-L 464

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
             Q   I P+   +  + + L + G   EA  F++++ E
Sbjct: 465 QMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQE 503



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 185/376 (49%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  GQQ+HA I+K         ++   +++  A  +              R+V SW  
Sbjct: 48  RDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 107

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM + G   D+  V  +  A   L+    G+  H Y+ + G
Sbjct: 108 IIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 167

Query: 442 IHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K G++  AR++F+     DR+   WNA++ GY QNG+ EEA   
Sbjct: 168 LHHCVFVASSLADMYGKCGVLDDARKVFDYIP--DRNAVAWNALMVGYVQNGMNEEAIRL 225

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
             +M +  + P  VT+++ L A   MG IE GKQ H  +I   L+ +  +GTS+++ Y K
Sbjct: 226 LSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 285

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F  + EK+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 286 VGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTL 345

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G +I     Q Y I+   E    +A    DM  + G +V A +     
Sbjct: 346 MSAATSTQNLKLGKEI-----QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDST 400

Query: 677 GEEGNVLEIWGSLLGS 692
            ++  +L  W +LL +
Sbjct: 401 VQKDLIL--WNTLLSA 414



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   G+Q HA +L+ G 
Sbjct: 6   VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A+ +F K     R+  +W A+I    + GL E A +
Sbjct: 66  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV--RNVFSWAAIIGVKCRIGLGEGALM 123

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+  +  L   VFV +SL DMY 
Sbjct: 124 GFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 183

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF  IP++N+V +  +++GY Q+GM+E A+ L   M+  GIEP  +T   
Sbjct: 184 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVST 243

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G ++EG Q
Sbjct: 244 CLSASANMGGIEEGKQ 259



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 197/457 (43%), Gaps = 92/457 (20%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  EAI +   M++ +   
Sbjct: 278 SILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKF 337

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A   T+NL++GK + C+ IR        + ++ ++MY+ C S ++A+ 
Sbjct: 338 DC--VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK- 394

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+  +++++ WNT++S Y  +    EA+R F  M    + 
Sbjct: 395 -----------------KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVP 437

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS IF            
Sbjct: 438 PNVITWNLIILSLLRNGQVNEAKEMF-------------LQMQSSGIF------------ 472

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  T   ALSA + L
Sbjct: 473 --------PNLISWTTMMNGLVQNGCSEEAI-LFLRKMQESRLRPNAFTITVALSACANL 523

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS------------------------- 378
             L  G+ +H YII+N         +A IE  +V                          
Sbjct: 524 ASLHFGRSIHGYIIRN----QQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPL 579

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY-- 436
           +N MISA+   G   E + L   ++  G   D++T+T+LLS       +DV +    +  
Sbjct: 580 YNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSCN---YGRDVNQAIEVFSD 636

Query: 437 -LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
            + +HG+    +E Y  ++D+ A +G    A ++ E+
Sbjct: 637 MVSKHGMK-PCLEHYGLMVDLLASAGETDKALRLMEE 672


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 212/660 (32%), Positives = 350/660 (53%), Gaps = 57/660 (8%)

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
           ++  ++   WN++++    T+    A+  F  M    +  +  +F  +  A ++L     
Sbjct: 12  SISHKDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIG 302
              V+  L +LG     D F A++ +  Y + G   +A ++FD   E + +V  W  +I 
Sbjct: 71  TLQVHAYLTRLG--LAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 303 GYVQNNHPVEAIELFVQVLEL-----DEIVFDDVTFLSALSAVSQL----QELDLGQQLH 353
            Y  N    EA   F ++  +      E    DV  L AL +   +      L  G  +H
Sbjct: 129 AYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVH 188

Query: 354 AYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNGL 391
             ++K    +   + N+++                      +RDVVSWN++IS F  NG 
Sbjct: 189 GLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGE 248

Query: 392 DDEGLMLVYEMQKQGFMI---DSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGM 447
            +  L    +M  +G      + VTV ALL + + L   +     H Y+  RH       
Sbjct: 249 AERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAK 308

Query: 448 E----SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +    + L+DM+A+ G +  AR+IF+  +   ++   W+AMIAGY Q    EEA   FRQ
Sbjct: 309 DVVVLTALLDMHARCGNLALAREIFDGVEG--KNVVCWSAMIAGYEQGSCPEEALRLFRQ 366

Query: 504 ML-EHN-----VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           ML E N     V PN VT+ SV+ AC+ +G       +H +++   LDQ+  + ++LIDM
Sbjct: 367 MLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDM 426

Query: 558 YSKSGVINYAANVFAKIPE--KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            +K G I +   VF+++ E  +  V++++MI   G HG  +RAL LF  M+  G EP+ I
Sbjct: 427 CAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEI 486

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T+++VLSACS+AGLV++G   F+ M+++Y + P+ +HY C+ D+LGR G + EA+  +  
Sbjct: 487 TYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILN 546

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +  + + L +WGSLL +C LHG+ +L E+V KK+L +D+ NS+ G+HVLL+N+Y + G W
Sbjct: 547 MPIKAD-LALWGSLLAACHLHGNCKLGEIVEKKILSLDS-NSV-GHHVLLANMYEDAGRW 603

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           ++V ++R E+R  GLRK  G S+I++G  V  F ++D+ HP+S  IY+ L+ L   +R A
Sbjct: 604 DDVVRMRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKA 663



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 251/583 (43%), Gaps = 80/583 (13%)

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
           SI+   T  WN++I      N P  A+  +++M+  +  +  +N+T+ ++LKACA  R L
Sbjct: 12  SISHKDTFHWNSLIAKNATQN-PQTALTFFTRMQAHAVPS--NNFTFPALLKACAALRRL 68

Query: 124 RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
                VH +  R      RF   +L++ Y  C         G  Y            +VF
Sbjct: 69  LPTLQVHAYLTRLGLAADRFSAAALVDAYGKC---------GHAYYAA---------QVF 110

Query: 184 DTMRRR--NVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           D M     +VV+W  ++S Y       EA   F RM    G   S    V+V     SLG
Sbjct: 111 DEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVV----SLG 166

Query: 241 DYKSA-------------DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              SA               V+GL+VK G  +     + +S + MY+       A ++F+
Sbjct: 167 ALVSACAVGCGSNCLRRGSAVHGLVVKYG--FGVSTHLGNSMVHMYSACKDVGGAWRVFN 224

Query: 288 N--CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQL 343
                +R+   WN++I G+  N     A+  F  ++      +  + VT ++ L + ++L
Sbjct: 225 GIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAEL 284

Query: 344 QELDLGQQLHAYIIKN----FVALPVIVLNAVIE--------------------RDVVSW 379
             ++    +H YI        VA  V+VL A+++                    ++VV W
Sbjct: 285 GCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCW 344

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMI------DSVTVTALLSAASNLRNQDVGKQT 433
           + MI+ + Q    +E L L  +M  +G M+      ++VT+ ++++A S L         
Sbjct: 345 SAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMI 404

Query: 434 HAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           H Y +  G+  +  + S LIDM AK G I+  RQ+F + D   R   +W++MI     +G
Sbjct: 405 HKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHG 464

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVG 551
             + A   F +M      PN +T  SVL AC+  G +E GK   +     Y +       
Sbjct: 465 EGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY 524

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHG 593
             L+D+  ++G ++ A NV   +P K  +  + +++     HG
Sbjct: 525 ACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHG 567



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 20/192 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD----NY 108
           G   LAR++FD +     V W+ +I G+   + P EA+ L+ QM         +      
Sbjct: 324 GNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAV 383

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T  SV+ AC+     R    +H + +    +    + ++L++M + C    D E     +
Sbjct: 384 TLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKC---GDIEHGRQVF 440

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
            E+D S              R VV+W++++           A+  F  M   G  P+ I+
Sbjct: 441 SEMDEST-------------RTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEIT 487

Query: 229 FVNVFPALSSLG 240
           +++V  A S  G
Sbjct: 488 YISVLSACSHAG 499


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 229/699 (32%), Positives = 355/699 (50%), Gaps = 59/699 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A Q F  + R   V W T++IG    +  +  ++ L+ +M      T+ ++ T+ S+L  
Sbjct: 269 AVQTFARMKRRDVVSW-TVMIGAYSQDGKFSLSLQLFREMLLEG--TAPNSVTFVSILSG 325

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C     L  G+ +H   +         V NSLL MYS C S  D+               
Sbjct: 326 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSR-------------- 371

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV-EAVRQFRMMLRMGIRPSTISFVNVFPA 235
                +FD M  R+ V+W+TI+    + + +  +A+  +R ML  G+ P T++   V  A
Sbjct: 372 ----SLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEA 427

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             SL + K   +V+  +++ G E   DL V  S + MYA+ G    ARK+FD    R+  
Sbjct: 428 CGSLAELKGGKLVHAHVIESGLE--GDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRI 484

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +WN+MI  Y Q   P EA+ LF + ++ + +  D +TF++ L+A     +L+ G+ +H  
Sbjct: 485 LWNSMITAY-QEKDPHEALHLFRE-MQPEGVSPDRITFMTVLNACVNAADLENGRTIHTR 542

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           I+ +  A  V V  A+                      RDVVSWN MI+A+VQ G D EG
Sbjct: 543 IVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQ-GRDGEG 601

Query: 396 -LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            + L + MQ +G   D  T T+LL+A S+      G+Q H+++    +  +  M + LI 
Sbjct: 602 AISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLIT 661

Query: 454 MYAKSGLIKTARQIFEKNDSGDR----DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
           MYA  G +  AR+IF+   S  R    D   W +MI  Y Q+G   +A   + QM    V
Sbjct: 662 MYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQV 721

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             + VT  SVL AC  + ++  G+ +H   +R  L  +V V  S++ MY K G  + A+ 
Sbjct: 722 EADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASI 781

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
           VF K   K+   +T +I  Y +HG  E+AL +FR ++  GIE   +TFVA+LSACS+ GL
Sbjct: 782 VFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGL 841

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           ++EG + F  M  E  I+P+ EH+ C+ D+L R G +  A EF+  +    N + +  +L
Sbjct: 842 IEEGCEFFASM-AELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTI-VLTAL 899

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           L +CR+HG  E A  VA+KL  +D  +  P  +V LSNI
Sbjct: 900 LAACRVHGDVERARRVAEKLEALDPESEAP--YVTLSNI 936



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 185/686 (26%), Positives = 326/686 (47%), Gaps = 55/686 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A Q F  + R   V W T++IG    +  +  ++ L+ +M      T+ ++ T+ S+L  
Sbjct: 64  AVQTFARMKRRDVVSW-TVMIGAYSQDGKFSLSLQLFREMLLEG--TAPNSVTFVSILSG 120

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C     L  G+ +H   +         V NSLL MYS C S  D+ M             
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRM------------- 167

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               + F  M+RR+VV+W  ++  Y +  ++  +++ FR ML  G  P++++FV++    
Sbjct: 168 ----QTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGC 223

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +    +    ++ L+V+   E   D+ V +  I MY + GC D A + F     R+   
Sbjct: 224 EAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVS 283

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W  MIG Y Q+     +++LF ++L L+    + VTF+S LS       L+ G+Q+HA +
Sbjct: 284 WTVMIGAYSQDGKFSLSLQLFREML-LEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 342

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV-QNGLDDEG 395
           +++ +   V+V N+++                     RD VSW+T+I A   ++    + 
Sbjct: 343 VESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDA 402

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L   M  +G M  ++ ++ +L A  +L     GK  HA+++  G+  + +   L++MY
Sbjct: 403 LPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMY 462

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK G +  AR++F++ +  +R +  WN+MI  Y Q     EA   FR+M    V+P+ +T
Sbjct: 463 AKCGTVGEARKVFDRIN--NRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRIT 519

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             +VL AC    ++E G+ +H   +      +V V T+L +MY+K G +  A  VF  + 
Sbjct: 520 FMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMV 579

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
            ++ V++  MI  Y Q    E A+SL  +M+  G+ PD  TF ++L+ACS    + +G Q
Sbjct: 580 FRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQ 639

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLEIWGSLLG 691
           I   +  E +++        +  M    G +  A E    +     +    L +W S++ 
Sbjct: 640 IHSWI-AESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMIT 698

Query: 692 SCRLHGHS----ELAEVVAKKLLEMD 713
           +   HG      EL E +  + +E D
Sbjct: 699 AYEQHGEYRKALELYEQMHSRQVEAD 724



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 266/556 (47%), Gaps = 50/556 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D     ++L AC +   L  GK +              V N  +NMY  C   LD  +  
Sbjct: 9   DRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKC-GCLDGAV-- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          + F  M+RR+VV+W  ++  Y +  ++  +++ FR ML  G  P+
Sbjct: 66  ---------------QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPN 110

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR-K 284
           +++FV++     +    +    ++ L+V+  S   + + VA+S + MY+    ++ +R +
Sbjct: 111 SVTFVSILSGCEAPSLLEQGRQIHALVVE--SSLESHVVVANSLLGMYSRCRSWEDSRMQ 168

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F     R+   W  MIG Y Q+     +I+LF ++L L+    + VTF+S LS      
Sbjct: 169 TFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREML-LEGTAPNSVTFVSILSGCEAPS 227

Query: 345 ELDLGQQLHAYIIKNFVA--LPVIVLNAVI--------------------ERDVVSWNTM 382
            L+ G+Q+HA ++++ +   L + VLN  I                     RDVVSW  M
Sbjct: 228 LLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVM 287

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I A+ Q+G     L L  EM  +G   +SVT  ++LS        + G+Q HA ++   +
Sbjct: 288 IGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 347

Query: 443 HFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI-AGYTQNGLLEEAFVA 500
                + + L+ MY++    + +R +F++     RD  +W+ +I A   ++    +A   
Sbjct: 348 ESHVVVANSLLGMYSRCRSWEDSRSLFDRMSV--RDSVSWSTIIMACSREDSHCRDALPL 405

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           +R ML   V P  + ++ VL AC  +  ++ GK +H   I   L+ ++ VG SL++MY+K
Sbjct: 406 YRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAK 464

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G +  A  VF +I  ++ + + +MI  Y +    E AL LFR M+  G+ PD ITF+ V
Sbjct: 465 CGTVGEARKVFDRINNRSRILWNSMITAYQEKDPHE-ALHLFREMQPEGVSPDRITFMTV 523

Query: 621 LSACSYAGLVDEGLQI 636
           L+AC  A  ++ G  I
Sbjct: 524 LNACVNAADLENGRTI 539



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 5/157 (3%)

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M    + P+ V I ++L AC  +G +E GK +        L+ ++ V    I+MY K G 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ A   FA++  ++ V++T MI  Y Q G    +L LFR M   G  P+++TFV++LS 
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           C    L+++G QI  L+     ++ S E +  VA+ L
Sbjct: 121 CEAPSLLEQGRQIHALV-----VESSLESHVVVANSL 152


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 222/738 (30%), Positives = 372/738 (50%), Gaps = 54/738 (7%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           IP     +  + L+  C+      A +LF  + +  TV  NT+I   V      +A+  Y
Sbjct: 67  IPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTY 126

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
             +       S  + T+++V  AC    +   G+  H   I+     + +V N+LL MY+
Sbjct: 127 DSVMLDGVIPS--HITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYA 184

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C  + DA                   +VF  +   N V + T++    +T +  EA   
Sbjct: 185 KCGLNADA------------------LRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAEL 226

Query: 214 FRMMLRMGIRPSTISFVNVFPALS----------SLGDYKSADVVYGLLVKLGSEYVNDL 263
           FR+MLR GIR  ++S  ++    +           +        ++ L VKLG E   DL
Sbjct: 227 FRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFE--RDL 284

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            + +S + MYA++G  D A K+F N    +   WN MI GY    +  +A E ++Q ++ 
Sbjct: 285 HLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAE-YLQRMQS 343

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMI 383
           D    DDVT+++ L+A  +  ++  G+Q+       F  +P   L         SWN ++
Sbjct: 344 DGYEPDDVTYINMLTACVKSGDVRTGRQI-------FDCMPCPSL--------TSWNAIL 388

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S + QN    E + L  +MQ Q    D  T+  +LS+ + L   + GK+ HA   + G +
Sbjct: 389 SGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFY 448

Query: 444 FEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +  + S LI++Y+K G ++ ++ +F K    + D   WN+M+AG++ N L ++A   F+
Sbjct: 449 DDVYVASSLINVYSKCGKMELSKHVFSK--LPELDVVCWNSMLAGFSINSLGQDALSFFK 506

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M +    P+  + A+V+ +C  + ++  G+Q H   ++     ++FVG+SLI+MY K G
Sbjct: 507 KMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCG 566

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +N A   F  +P +N+VT+  MI GY Q+G    AL L+  M   G +PD IT+VAVL+
Sbjct: 567 DVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLT 626

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS++ LVDEGL+IF+ M Q+Y + P   HY C+ D L R G+  E    +  +  + + 
Sbjct: 627 ACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDA 686

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W  +L SCR+H +  LA+  A++L  +D +NS    +VLL+N+Y+  G W++   VR
Sbjct: 687 V-VWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSAS--YVLLANMYSSLGKWDDAHVVR 743

Query: 743 KEMRERGLRKEVGCSWID 760
             M    +RK+ G S  D
Sbjct: 744 DLMSHNQVRKDPGYSRND 761



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 253/588 (43%), Gaps = 120/588 (20%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           +++++ C   +    GK VH    R       F+ N  + +YS C     A         
Sbjct: 10  ANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASA--------- 60

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM------------- 217
                    C VFD +  +N+ +WN I++ Y K      A R F  M             
Sbjct: 61  ---------CHVFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLIS 111

Query: 218 ------------------LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
                             +  G+ PS I+F  VF A  SL D       +G+++K+G E 
Sbjct: 112 TMVRCGYERQALDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLE- 170

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            ++++V ++ + MYA+ G    A ++F +  E N   + TM+GG  Q N   EA ELF  
Sbjct: 171 -SNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRL 229

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDL-----------GQQLHAYIIKNFVALPVIVL 368
           +L    I  D V+ LS++  V    E D+           G+Q+H   +K      + + 
Sbjct: 230 MLR-KGIRVDSVS-LSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLC 287

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           N++++                      VVSWN MI+ +      ++    +  MQ  G+ 
Sbjct: 288 NSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYE 347

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
            D VT   +L+A                                    KSG ++T RQIF
Sbjct: 348 PDDVTYINMLTAC----------------------------------VKSGDVRTGRQIF 373

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +          +WNA+++GY QN    EA   FR+M      P+  T+A +L +C  +G 
Sbjct: 374 DCMPCPSL--TSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGF 431

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +E GK++H  S ++    +V+V +SLI++YSK G +  + +VF+K+PE + V + +M+ G
Sbjct: 432 LEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAG 491

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +  + + + ALS F+ M+  G  P   +F  V+S+C+    + +G Q 
Sbjct: 492 FSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQF 539


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/572 (32%), Positives = 308/572 (53%), Gaps = 32/572 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ LL+  G  Y    F+ +  + MY++ G  D A K+FD   +RN   W  MI G  QN
Sbjct: 27  LHALLICAG--YTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQN 84

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
           +   EAI  F  +    E+      F SA+ A + L  +++G+Q+H   +K  +   + V
Sbjct: 85  SKFSEAIRTFCGMRICGEVP-TQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 368 ----------LNAVIE----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                       A+ +          +D VSW  MI  + + G  +E L+   +M  +  
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTA 464
            ID   + + L A   L+    G+  H+ +++ G     F G  + L DMY+K+G +++A
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG--NALTDMYSKAGDMESA 261

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
             +F   DS  R+  ++  +I GY +   +E+    F ++    + PN  T +S++ AC 
Sbjct: 262 SNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
               +E G QLH   ++   D++ FV + L+DMY K G++ +A   F +I +   + + +
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNS 380

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           ++  +GQHG+ + A+  F  M   G++P+AITF+++L+ CS+AGLV+EGL  F  M + Y
Sbjct: 381 LVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTY 440

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            + P  EHY CV D+LGR G++ EA EF+  +  E N    W S LG+CR+HG  E+ ++
Sbjct: 441 GVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG-WCSFLGACRIHGDKEMGKL 499

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+KL++++ +NS  G  VLLSNIYA E  WE+V  VR  MR+  ++K  G SW+DVG  
Sbjct: 500 AAEKLVKLEPKNS--GALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYK 557

Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            + F ++D  H +   IYE L+ L  +++ AG
Sbjct: 558 THVFGAEDWSHXRKSAIYEKLDXLLDQIKAAG 589



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 251/522 (48%), Gaps = 61/522 (11%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D    + V++  A+T+ LR GK +H   I     P  F+ N L+NMYS C          
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC---------- 53

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                    + D   K+FDTM +RN+V+W  ++S   +  ++ EA+R F  M   G  P+
Sbjct: 54  --------GELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT 105

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F +   A +SLG  +    ++ L +K G    ++LFV S+   MY++ G    A K+
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFG--IGSELFVGSNLEDMYSKCGAMFDACKV 163

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+    ++   W  MI GY +     EA+  F ++++ +E+  D     S L A   L+ 
Sbjct: 164 FEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKA 222

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWNTMIS 384
              G+ +H+ ++K      + V NA+ +                     R+VVS+  +I 
Sbjct: 223 CKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLID 282

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +V+    ++GL +  E+++QG   +  T ++L+ A +N    + G Q HA +++  I+F
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK--INF 340

Query: 445 EG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           +    + S L+DMY K GL++ A Q F  ++ GD  +  WN++++ + Q+GL ++A   F
Sbjct: 341 DEDPFVSSILVDMYGKCGLLEHAIQAF--DEIGDPTEIAWNSLVSVFGQHGLGKDAIKFF 398

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG------TSLI 555
            +M++  V PN +T  S+L  C+  G +E      G    Y +D+   V       + +I
Sbjct: 399 ERMVDRGVKPNAITFISLLTGCSHAGLVE-----EGLDYFYSMDKTYGVVPGEEHYSCVI 453

Query: 556 DMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
           D+  ++G +  A     ++P E N+  + + +     HG  E
Sbjct: 454 DLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 203/456 (44%), Gaps = 73/456 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD++ +   V W  +I G   N+   EAI  +  M+      +   + +SS ++AC
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT--QFAFSSAIRAC 116

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++ +GK +HC  ++       FV ++L +MYS C +  DA                
Sbjct: 117 ASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA---------------- 160

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CKVF+ M  ++ V+W  ++  Y K   + EA+  F+ M+   +        +   A  
Sbjct: 161 --CKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACG 218

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEV 296
           +L   K    V+  +VKLG E  +D+FV ++   MY++ G  + A  +F    E RN   
Sbjct: 219 ALKACKFGRSVHSSVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVS 276

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           +  +I GYV+     + + +FV+ L    I  ++ TF S + A +    L+ G QLHA +
Sbjct: 277 YTCLIDGYVETEQIEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 357 IK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           +K NF   P +                     + + +   ++WN+++S F Q+GL  + +
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-----------E 445
                M  +G   +++T  +LL+  S           HA L+  G+ +            
Sbjct: 396 KFFERMVDRGVKPNAITFISLLTGCS-----------HAGLVEEGLDYFYSMDKTYGVVP 444

Query: 446 GMESY--LIDMYAKSGLIKTARQI-----FEKNDSG 474
           G E Y  +ID+  ++G +K A++      FE N  G
Sbjct: 445 GEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG 480



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 6/216 (2%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            +A V+        +  GKQLH   I        F+   L++MYSK G +++A  +F  +
Sbjct: 7   ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
           P++N V++T MI G  Q+     A+  F  M+ CG  P    F + + AC+  G ++ G 
Sbjct: 67  PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           Q+  L  + + I         + DM  + G + +A +  +E+  +  V   W +++    
Sbjct: 127 QMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV--SWTAMIDGYS 183

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             G  E A +  KK+++ +        HVL S + A
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQ---HVLCSTLGA 216


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 171/433 (39%), Positives = 258/433 (59%), Gaps = 10/433 (2%)

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V + ++ERD VSWNT+I    ++    E L +V EM + GFM D+ T++ +L   +   +
Sbjct: 126 VFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECAD 185

Query: 427 QDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              G   H Y +++G     F G  S LIDMYA    +  + ++F+     D D   WN+
Sbjct: 186 IKRGMVVHGYAIKNGFDNDVFVG--SSLIDMYANCTQMDYSMKVFDS--FSDCDAVLWNS 241

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+AGY QNG +EEA   FR+ML+  V P  VT +S++PA   +  + LGKQLH + IR  
Sbjct: 242 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + N+F+ +SLIDMY K G ++ A  VF  I   + V++T MI+GY  HG +  A  LF 
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+   ++P+ ITF+AVL+ACS+AGLVD G + F+ M  +Y   PS EH   +AD LGR 
Sbjct: 362 RMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 421

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G + EAY F+ E+  +     +W +LL +CR+H ++ LAE VAKK+ E++ ++   G HV
Sbjct: 422 GDLDEAYNFISEMKIKPTS-SVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM--GSHV 478

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           +LSN+Y+  G W    ++RK MR +G++KE  CSWI+V   ++ F + D+ HP   +I +
Sbjct: 479 ILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIID 538

Query: 784 MLERLAMEMRNAG 796
            L   + +M   G
Sbjct: 539 ALNVYSEQMIRQG 551



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 228/513 (44%), Gaps = 76/513 (14%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
            AI L+ QM+ S    S    +  + LK+CA      +  ++H   IR  S   RF  N+
Sbjct: 30  HAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANA 89

Query: 148 LLNMYSTCLSSLDAEMVGLKYV----------EVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
           LLN+   C+     ++ G  +            ++ + Y+ + KVFD M  R+ V+WNT+
Sbjct: 90  LLNL---CI-----KLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTL 141

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           +    + +R+ EA+   R M R G  P T +   V P  +   D K   VV+G  +K G 
Sbjct: 142 ILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNG- 200

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            + ND+FV SS I MYA     D++ K+FD+  + +  +WN+M+ GY QN    EA+ +F
Sbjct: 201 -FDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIF 259

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----- 366
            ++L+   +    VTF S + A   L  L LG+QLHAY+I+       F++  +I     
Sbjct: 260 RRMLQAG-VRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCK 318

Query: 367 ---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                    V N +   D+VSW  MI  +  +G   E  +L   M+      + +T  A+
Sbjct: 319 CGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAV 378

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           L+A S           HA L+ +G        Y   M  + G + +        D+  R 
Sbjct: 379 LTACS-----------HAGLVDNGW------KYFNSMSNQYGFVPSLEHCAALADTLGR- 420

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
                         G L+EA+    +M    + P     +++L AC    N  L +++  
Sbjct: 421 -------------AGDLDEAYNFISEM---KIKPTSSVWSTLLRACRVHKNTVLAEEV-A 463

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
             I  L  +++     L +MYS SG  N AA +
Sbjct: 464 KKIFELEPKSMGSHVILSNMYSASGRWNEAAQL 496



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 192/409 (46%), Gaps = 36/409 (8%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WNT+I+G   +    EA+ +  +M +       D +T S+VL   A
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP--DTFTLSTVLPIFA 181

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  +++ G  VH + I+   +   FV +SL++MY+ C              ++DYS    
Sbjct: 182 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANC-------------TQMDYSM--- 225

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD+    + V WN++++ Y +     EA+  FR ML+ G+RP  ++F ++ PA  +
Sbjct: 226 --KVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGN 283

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L   +    ++  L++  + + +++F++SS I MY + G  D AR++F+     +   W 
Sbjct: 284 LSLLRLGKQLHAYLIR--ARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWT 341

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  +    EA  LF + +EL  +  + +TFL+ L+A S    +D G +    +  
Sbjct: 342 AMIMGYALHGPTTEAFVLF-ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSN 400

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
            +  +P +   A +       +T+  A    G  DE    + EM+ +     S   + LL
Sbjct: 401 QYGFVPSLEHCAALA------DTLGRA----GDLDEAYNFISEMKIKP---TSSVWSTLL 447

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
            A    +N  + ++    +        G    L +MY+ SG    A Q+
Sbjct: 448 RACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQL 496



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +AR++F+ I  P  V W  +I+G+  +    EA +L+ +M+  +     ++ T
Sbjct: 317 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGN--VKPNHIT 374

Query: 110 YSSVLKACAET 120
           + +VL AC+  
Sbjct: 375 FLAVLTACSHA 385


>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
          Length = 1118

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 189/601 (31%), Positives = 325/601 (54%), Gaps = 30/601 (4%)

Query: 182  VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
            +FD +R       N ++  +++  ++  A+    +  R+ +R    +   +  A ++L  
Sbjct: 525  LFDEIRSPTPRLANALLRAHIRARQWRAAIL---LGQRLRVRRDGFTLSLLLRACTALPS 581

Query: 242  YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                  V+   V+       D FVA++ + MY+  G    A   +    + +  +  +++
Sbjct: 582  LTHGRAVHAAAVR-SCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVV 640

Query: 302  GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             GY QN    EA+E F + +    ++   VT +S +SA +QL  +  GQ  HAY+++N +
Sbjct: 641  TGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSL 700

Query: 362  ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            +  + ++NAV+                    +RDV++W+ MI  +VQ+G    G  +  E
Sbjct: 701  SYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYRE 760

Query: 402  MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGL 460
            M K     +SVT+ ++L A + + + + GK+ H   +  G   E G+ + L+DMY K   
Sbjct: 761  MVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSC 820

Query: 461  IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
             + A ++F +     +D   W A+I G TQN L  E+  +F+ ML ++  P+ VT+  VL
Sbjct: 821  HEEAMRLFHRMPK--KDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVL 878

Query: 521  PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
             AC+  G   L   LHG+ +R   + N FV  +L+D+YSK G ++ A  VF    EK+ V
Sbjct: 879  AACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIV 938

Query: 581  TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
             + +MI GYG HG+ + A++L++ M    I+P+ +TF++VLSACS++GLV EG+QIFD M
Sbjct: 939  VWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSM 998

Query: 641  QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
             Q + + P+ EH   + D+LGR G++ EA   ++++     V   W +LL +CR H +++
Sbjct: 999  TQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRA-VAHTWCALLAACRKHNNTK 1057

Query: 701  LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
            ++EV AK LL++D  +   GY+ LL+N+YA +  WENV   R  ++ R LRK  G S ++
Sbjct: 1058 MSEVAAKNLLKLDPDHV--GYYNLLTNLYAFDEKWENVKDTRDMVKGRDLRKVAGYSSVE 1115

Query: 761  V 761
            V
Sbjct: 1116 V 1116



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 271/593 (45%), Gaps = 84/593 (14%)

Query: 55   PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            P LAR LFD I  PT  + N ++   +       AILL  +++        D +T S +L
Sbjct: 519  PGLARDLFDEIRSPTPRLANALLRAHIRARQWRAAILLGQRLRVRR-----DGFTLSLLL 573

Query: 115  KACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
            +AC    +L  G+AVH   +R C ++   FV  +++ MYS C      +M G        
Sbjct: 574  RACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRC-----GDMAG-------- 620

Query: 174  SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNV 232
                     +  + + ++V   ++V+ Y +     EA+  F R ++  G+  + ++ V+V
Sbjct: 621  -----AINAYGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSV 675

Query: 233  FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
              A + LG  +     +  +V+    Y  DL + ++ +  Y ++G    + ++F+   +R
Sbjct: 676  MSAAAQLGHVRKGQACHAYVVRNSLSY--DLALVNAVLGFYVKIGDLQASMRLFEGMTDR 733

Query: 293  NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
            +   W+ MI GYVQ+        ++ ++++   +  + VT +S L A + + + + G++L
Sbjct: 734  DVITWSCMIKGYVQHGDAHTGFRMYREMVK-ARVQPNSVTLVSVLQACALVVDAEEGKRL 792

Query: 353  HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
            H   +     L + V  A+++                    +DVV+W  +I    QN L 
Sbjct: 793  HRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELP 852

Query: 393  DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
             E L     M     + D+VT+  +L+A S      +    H YL+R+G +    + + L
Sbjct: 853  GESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAAL 912

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            +D+Y+K G + +A ++FE   + ++D   W +MIAGY  +GL +EA   +++M+  ++ P
Sbjct: 913  LDLYSKCGDLDSAVRVFE--GTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQP 970

Query: 512  NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            N VT  SVL AC+  G ++ G Q                            + +    VF
Sbjct: 971  NNVTFLSVLSACSHSGLVQEGIQ----------------------------IFDSMTQVF 1002

Query: 572  AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
              +P  N+   + M+   G+ G  + A+ + R M G  +   A T+ A+L+AC
Sbjct: 1003 GVVP--NAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAV---AHTWCALLAAC 1050



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 221/478 (46%), Gaps = 67/478 (14%)

Query: 62   FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
            +  + +P  V+  +++ G+  N +  EA+  +++             T  SV+ A A+  
Sbjct: 625  YGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFAR-NVVGQGVLVTPVTLVSVMSAAAQLG 683

Query: 122  NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            ++R G+A H + +R   +    + N++L  Y   +  L A M                 +
Sbjct: 684  HVRKGQACHAYVVRNSLSYDLALVNAVLGFYVK-IGDLQASM-----------------R 725

Query: 182  VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
            +F+ M  R+V+ W+ ++  YV+        R +R M++  ++P++++ V+V  A + + D
Sbjct: 726  LFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVD 785

Query: 242  YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
             +    ++ + V +G E   +L VA++ + MY +  C + A ++F    +++   W  +I
Sbjct: 786  AEEGKRLHRVAVSIGCEL--ELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVI 843

Query: 302  GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-- 359
            GG  QN  P E++  F + + L++ V D VT +  L+A S+     L   LH Y+++N  
Sbjct: 844  GGLTQNELPGESLHSF-KCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGF 902

Query: 360  ----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                FVA  ++              V     E+D+V W +MI+ +  +GL  E + L   
Sbjct: 903  NNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQR 962

Query: 402  MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGM------------E 448
            M       ++VT  ++LSA S           H+ L++ GI  F+ M            +
Sbjct: 963  MIASSIQPNNVTFLSVLSACS-----------HSGLVQEGIQIFDSMTQVFGVVPNAEHQ 1011

Query: 449  SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            S ++D+  ++G ++ A ++    D G     TW A++A   ++   + + VA + +L+
Sbjct: 1012 SAMVDLLGRAGELQEAIRVIRDMD-GRAVAHTWCALLAACRKHNNTKMSEVAAKNLLK 1068


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 237/778 (30%), Positives = 371/778 (47%), Gaps = 121/778 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y  +L+ C   R+L  GK +H   ++   F   + ++   L+  Y+ C    DA    L 
Sbjct: 73  YGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKC----DA----LD 124

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
             EV          +F  +R RNV +W  I+    +      A+  F  ML   I P   
Sbjct: 125 IAEV----------LFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF 174

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              NV  A  +L   +    V+G +VK G E  + +FVASS   MY + G  D ARK+FD
Sbjct: 175 VVPNVCKACGALQWSRFGRGVHGYVVKAGLE--DCVFVASSLADMYGKCGVLDDARKVFD 232

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN ++ GYVQN    EAI LF   +  + +    VT  + LSA + +  ++
Sbjct: 233 EIPERNVVAWNALMVGYVQNGMNEEAIRLFSD-MRKEGVEPTRVTVSTCLSASANMGGVE 291

Query: 348 LGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFV 387
            G+Q HA  I N + L  I                    V + +I++DVV+WN +IS +V
Sbjct: 292 EGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYV 351

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           Q GL +  + +   M+ +    D VT+  L+SAA+  +N  +GK+   Y +RH   FE  
Sbjct: 352 QQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHS--FESD 409

Query: 447 --MESYLIDM-------------------------------YAKSGLIKTARQIFEKND- 472
             + S ++DM                               YA+SGL     ++F     
Sbjct: 410 IVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQL 469

Query: 473 -------------------SGDRDQA-----------------TWNAMIAGYTQNGLLEE 496
                              +G+ D+A                 +W  M+ G  QNG  EE
Sbjct: 470 EGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEE 529

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLI 555
           A +  R+M E  + PN V+I   L AC  + ++  G+ +HG+ IR L    +V + TSL+
Sbjct: 530 AILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLV 589

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           DMY+K G IN A  VF          Y  MI  Y  +G  + A++L+RS++G G++PD I
Sbjct: 590 DMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 649

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           T   VLSAC++AG  ++  +I   M  ++ + P  EHY  + D+L   G+  +A   ++E
Sbjct: 650 TITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQTDKALRLIEE 709

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +  + +   I  SL+ SC     SEL + ++++L+E +  NS  G +V +SN YA EG+W
Sbjct: 710 MPYKPDARMI-QSLVASCNKQPKSELVDYLSRQLIESEPDNS--GNYVTISNAYAVEGSW 766

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGY-VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           + V K+R+ M+ +GL+K+ GCSWI + G  V+ F + D+ H + ++I  +L  L  +M
Sbjct: 767 DEVVKMREIMKAKGLKKKPGCSWIQIKGEGVHVFVANDKTHIRINEIQRILALLLYDM 824



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 139/256 (54%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   GKQ HA +L++G 
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 101

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   +  A  +F K     R+  +W A+I    + GL E A +
Sbjct: 102 FYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRV--RNVFSWAAIIGVKCRIGLCEGALM 159

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+ ++  L+  VFV +SL DMY 
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYG 219

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ LF  M+  G+EP  +T   
Sbjct: 220 KCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVST 279

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G V+EG Q
Sbjct: 280 CLSASANMGGVEEGKQ 295



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 79/451 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN II G+V   L   AI +   M+      
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKY 373

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T ++++ A A T+NL++GK V C+ IR        + +++++MY+ C S +DA+ 
Sbjct: 374 DC--VTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK- 430

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+   ++++ WNT+++ Y ++    E +R F  M   G+ 
Sbjct: 431 -----------------KVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVP 473

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G+   A  ++             L + SS IF            
Sbjct: 474 PNVITWNLIILSLLRNGEVDEAKDMF-------------LQMQSSGIF------------ 508

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  + V+   ALSA + L
Sbjct: 509 --------PNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAVSITVALSACANL 559

Query: 344 QELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNTM 382
             L  G+ +H YII+N      +                     V  + +  ++  +N M
Sbjct: 560 ASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAM 619

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHG 441
           ISA+   G   E + L   ++  G   D++T+T +LSA ++  + +   +    ++ +HG
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHG 679

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           ++   +E Y  ++D+ A +G    A ++ E+
Sbjct: 680 MN-PCLEHYGLMVDLLASAGQTDKALRLIEE 709


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 218/763 (28%), Positives = 367/763 (48%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LF  +     V W  +++    N    EA+  Y QM++      C+   +++V+  C
Sbjct: 98  AQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG--VPCNANAFATVVSLC 155

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N   G  V    I         V NSL+ M+       DAE               
Sbjct: 156 GSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAE--------------- 200

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+FD M   + ++WN ++S Y       +    F  M   G+RP   +  ++    +
Sbjct: 201 ---KLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S   +     ++ L ++  S   + + V ++ + MY+  G    A  +F N   R+   W
Sbjct: 258 SSDHFSHGSGIHSLCLR--SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 315

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMI  YVQN +  +A++   Q+   +E   + +TF SAL A S    L  G+ +HA ++
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNESP-NHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   ++V N++I                      D+VS+N +I  +       + + 
Sbjct: 375 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQ 434

Query: 398 LVYEMQKQGFM---IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
           +   M+  G     I  + +    +++++L N   G+  HAY++R G +  E + + LI 
Sbjct: 435 VFSWMRSAGIKPNYITMINIHGSFASSNDLHN--YGRPLHAYIIRTGFLSDEYVANSLIT 492

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G ++++  IF  N   +++  +WNA+IA   Q G  EEA   F  M       + 
Sbjct: 493 MYAKCGNLESSTNIF--NSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDR 550

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           V +A  L +C  + ++E G QLHG  ++  LD + +V  + +DMY K G ++    V   
Sbjct: 551 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPD 610

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              +    + T+I GY ++G  + A   F+ M   G +PD +TFVA+LSACS+AGLVD+G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 670

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  ++ M   + + P  +H  C+ D+LGR+G+  EA +F++E+    N L IW SLL S 
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDL-IWRSLLSSS 729

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R H + E+    AKKLLE+D  +     +VLLSN+YA    W +VDK+R  M+   + K 
Sbjct: 730 RTHKNLEIGRKTAKKLLELDPFDDSA--YVLLSNLYATNARWADVDKLRSHMKTININKR 787

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ H  + KIY  L+ + +++R  G
Sbjct: 788 PACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 830



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 241/505 (47%), Gaps = 53/505 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR H A +LFD +    T+ WN +I  +    +  +  L++S M+        D  T  S
Sbjct: 194 GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP--DATTLCS 251

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++  CA + +   G  +H   +R   + S  V N+L+NMYS      DAE          
Sbjct: 252 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF--------- 302

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F  M RR++++WNT++S YV+     +A++    +      P+ ++F + 
Sbjct: 303 ---------LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 353

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A SS G      +V+ ++++L  +   +L V +S I MY +    + A K+F +    
Sbjct: 354 LGACSSPGALIDGKMVHAIVLQLSLQ--RNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 411

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL-DLGQQ 351
           +   +N +IGGY       +A+++F   +    I  + +T ++   + +   +L + G+ 
Sbjct: 412 DIVSYNVLIGGYAVLEDGTKAMQVF-SWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 470

Query: 352 LHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGL 391
           LHAYII+       +VA  +I              + N++  +++VSWN +I+A VQ G 
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 530

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
            +E L L  +MQ  G  +D V +   LS+ ++L + + G Q H   ++ G+     +SY+
Sbjct: 531 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLD---SDSYV 587

Query: 452 I----DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           +    DMY K G +    Q+    D   R Q  WN +I+GY + G  +EA   F+QM+  
Sbjct: 588 VNAAMDMYGKCGKMDEMLQVVP--DQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAT 645

Query: 508 NVTPNVVTIASVLPACNPMGNIELG 532
              P+ VT  ++L AC+  G ++ G
Sbjct: 646 GRKPDYVTFVALLSACSHAGLVDKG 670



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 206/459 (44%), Gaps = 29/459 (6%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG---DY 242
           M  R    W T VS  V+  R   A    R M   G+  S  +  ++  A    G     
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                ++ L  + G   + ++++ ++ + +Y   G    A+++F    ERN   W  ++ 
Sbjct: 61  ACGAAIHALTHRAG--LMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMV 118

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
               N +  EA+  + Q +  D +  +   F + +S    L+    G Q+ + +I + + 
Sbjct: 119 ALSSNGYLEEALRAYRQ-MRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 177

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             V V N++I                    E D +SWN MIS +   G+  +  ++  +M
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +  G   D+ T+ +L+S  ++  +   G   H+  LR  +     + + L++MY+ +G +
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             A  +F   +   RD  +WN MI+ Y QN    +A     Q+   N +PN +T +S L 
Sbjct: 298 SDAEFLFW--NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 355

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC+  G +  GK +H   ++  L +N+ VG SLI MY K   +  A  VF  +P  + V+
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 415

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           Y  +I GY       +A+ +F  M+  GI+P+ IT + +
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 14/216 (6%)

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG---NIEL 531
           DR  +TW   ++G  + G    AF   R M E  V  +   +AS++ AC   G    I  
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G  +H  + R  L  NV++GT+L+ +Y   G+++ A  +F ++PE+N V++T +++    
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ-----IFDLMQQEYKI 646
           +G  E AL  +R M+  G+  +A  F  V+S C        GLQ     I   +Q +  +
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
             S      +  M G +G+V +A +    + E   +
Sbjct: 183 ANS------LITMFGNLGRVHDAEKLFDRMEEHDTI 212


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 168/434 (38%), Positives = 261/434 (60%), Gaps = 10/434 (2%)

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V + +IERDVVSWNT++    + G   E L  V +M ++GF  DS T++ +L   +   +
Sbjct: 126 VFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECAD 185

Query: 427 QDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              G + H +  R+G     F G  S LIDMYA       + ++F+  +   RD   WN+
Sbjct: 186 VKRGLEVHGFAFRNGFDSDVFVG--SSLIDMYANCTRTDYSVKVFD--NLPVRDHILWNS 241

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           ++AG  QNG +EEA   FR+ML+  V P  VT +S++P C  + ++  GKQLH + I   
Sbjct: 242 LLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGG 301

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + NVF+ +SLIDMY K G I+ A  +F K+   + V++T MI+GY  HG +  AL LF 
Sbjct: 302 FEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFE 361

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+    +P+ ITF+AVL+ACS+AGLVD+G + F  M   Y I P+ EH+  +AD LGR 
Sbjct: 362 RMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRA 421

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EAY F+ ++ +      +W +LL +CR+H ++ LAE VAKK++E++ R+   G HV
Sbjct: 422 GELDEAYNFISKM-QIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRS--IGSHV 478

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           +LSN+Y+  G W     +R+ MR++G++K+  CSWI+V   ++ F + D+ HP   +I +
Sbjct: 479 VLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIID 538

Query: 784 MLERLAMEMRNAGN 797
            L   + +M   G+
Sbjct: 539 ALNAFSEQMAREGH 552



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 230/512 (44%), Gaps = 59/512 (11%)

Query: 88  EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNS 147
           +A+ L+ +M+ S+   S    +  + LK+CA      +G ++H   IR  +   RF  N+
Sbjct: 31  DAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANA 90

Query: 148 LLNMYSTC-LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           LLN+Y     S LD+  V +  V    + ++ V KVFD M  R+VV+WNT+V    +  R
Sbjct: 91  LLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGR 150

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           + EA+   R M R G RP + +   V P  +   D K    V+G   + G  + +D+FV 
Sbjct: 151 HHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNG--FDSDVFVG 208

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           SS I MYA     D++ K+FDN   R+  +WN+++ G  QN    EA+ +F ++L+   +
Sbjct: 209 SSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG-V 267

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI-------------- 366
               VTF S +     L  L  G+QLHAY+I        F++  +I              
Sbjct: 268 RPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHC 327

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           + + +   DVVSW  MI  +  +G   E L+L   M+      + +T  A+L+A S    
Sbjct: 328 IFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS---- 383

Query: 427 QDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
                  HA L+  G        Y   M    G++ T        D+  R          
Sbjct: 384 -------HAGLVDKGW------KYFKSMSNHYGIVPTLEHFAALADTLGR---------- 420

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
                G L+EA+    +M    + P     +++L AC    N  L +++    I  L  +
Sbjct: 421 ----AGELDEAYNFISKM---QIKPTASVWSTLLRACRVHKNTMLAEEV-AKKIMELEPR 472

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           ++     L +MYS SG  N AA++   + +K 
Sbjct: 473 SIGSHVVLSNMYSASGRWNEAAHLRESMRKKG 504



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 23/308 (7%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WNT+++G       +EA+    +M +       D++T S+VL   A
Sbjct: 124 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRP--DSFTLSTVLPIFA 181

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  +++ G  VH    R   +   FV +SL++MY+ C                DYS    
Sbjct: 182 ECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANC-------------TRTDYS---- 224

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD +  R+ + WN++++   +     EA+  FR ML+ G+RP  ++F ++ P   +
Sbjct: 225 -VKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGN 283

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L   +    ++  ++  G E  +++F++SS I MY + G    A  IFD     +   W 
Sbjct: 284 LASLRFGKQLHAYVICGGFE--DNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWT 341

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  +    EA+ LF + +EL     + +TFL+ L+A S    +D G +    +  
Sbjct: 342 AMIMGYALHGPAREALVLF-ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSN 400

Query: 359 NFVALPVI 366
           ++  +P +
Sbjct: 401 HYGIVPTL 408



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 34/261 (13%)

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV--TIASVLPACNPMGNIELGKQLHGF 538
           W   I      G   +A   F +M       + V  ++ + L +C  +G   LG  LH  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 539 SIRYLLDQNVFVGTSLIDMYSK-------------------SGVINYAANVFAKIPEKNS 579
           +IR     + F   +L+++Y K                   S        VF ++ E++ 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++ T++LG  + G    AL   R M   G  PD+ T   VL   +    V  GL++   
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 640 -----MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
                   +  +  S      + DM     +   + +    L    ++L  W SLL  C 
Sbjct: 196 AFRNGFDSDVFVGSS------LIDMYANCTRTDYSVKVFDNLPVRDHIL--WNSLLAGCA 247

Query: 695 LHGHSELAEVVAKKLLEMDTR 715
            +G  E A  + +++L+   R
Sbjct: 248 QNGSVEEALGIFRRMLQAGVR 268



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +A  +FD ++ P  V W  +I+G+  +    EA++L+ +M+  +     ++ T
Sbjct: 317 CKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKP--NHIT 374

Query: 110 YSSVLKACAET 120
           + +VL AC+  
Sbjct: 375 FLAVLTACSHA 385


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 186/614 (30%), Positives = 323/614 (52%), Gaps = 40/614 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD M R+NVVAW +++S   +  R   A+  F  M+  G+ P+  +      A + LG 
Sbjct: 70  LFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGA 129

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            ++ + V+ L V+ G  +  D ++ S  I MY+  G    A+++FD     +   + ++I
Sbjct: 130 LRAGEQVHSLAVRAG--FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 187

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
             + +N     A E  +Q+L+   +  ++ T  + L+A  ++    LGQQ+H Y+IK   
Sbjct: 188 SAFCRNGEFELAAEALIQMLK-QGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKI- 241

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                    +  + V S   +I  + +N               +G   +   ++ +L A 
Sbjct: 242 --------GLRSQSVYSSTALIDFYSRN---------------EGVDPNEFALSIVLGAC 278

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
            ++    +G+Q H   ++H +  +  + + L+ MY ++GL++    +  K +  + D  +
Sbjct: 279 GSI---GLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE--NPDLVS 333

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           W   I+   QNG  E+A     QM     TPN    +SVL +C  + +++ G Q H  ++
Sbjct: 334 WTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLAL 393

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           +   D  +  G +LI+MYSK G +  A   F  +   +  ++ ++I G+ QHG + +AL 
Sbjct: 394 KLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALE 453

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           +F  M+  GI+PD  TF+ VL  C+++G+V+EG   F LM  +Y   P+  HY C+ DML
Sbjct: 454 VFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDML 513

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G+  EA   + ++  E + L IW +LL SC+LH + ++ ++ A +L+E+  R+S   
Sbjct: 514 GRNGRFDEALRMINDMPFEPDAL-IWKTLLASCKLHRNLDIGKLAADRLMELSDRDS--A 570

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
            +VL+SNIYA  G WE+  KVR+ M E G++K+ GCSWI++   V+ FAS+D  HP S  
Sbjct: 571 SYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDS 630

Query: 781 IYEMLERLAMEMRN 794
           IY+ML  L   M++
Sbjct: 631 IYQMLGELVAVMQD 644



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 131/638 (20%), Positives = 238/638 (37%), Gaps = 155/638 (24%)

Query: 45  RLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTS 104
           RL+++ + GR   A  LFD + R   V W +++ G   N  P  A+ +++ M +S    +
Sbjct: 54  RLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESG--VA 111

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
            +++  ++ L ACA+   LR G+ VH   +R       ++ + L+ MYS C S   A+  
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK-- 169

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                           +VFD M   +VV + +++S + +   +  A      ML+ G++P
Sbjct: 170 ----------------EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKP 213

Query: 225 STISFVNVFPA------------------LSSLGDYKSADVV-------------YGLLV 253
           +  +   +  A                  L S   Y S  ++             + L +
Sbjct: 214 NEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSI 273

Query: 254 KLGS-----------------EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            LG+                 + + D+ V+++ + MY   G  +    + +     +   
Sbjct: 274 VLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVS 333

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W T I    QN    +AI L  Q +  +    +   F S LS+ + +  LD G Q H   
Sbjct: 334 WTTAISANFQNGFGEKAIALLCQ-MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLA 392

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           +K      +   NA+I                      DV SWN++I    Q+G  ++ L
Sbjct: 393 LKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKAL 452

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            +  +M+  G   D  T   +L   +           H+ ++  G  F  +   +ID Y+
Sbjct: 453 EVFSKMRSNGIKPDDSTFLGVLMGCN-----------HSGMVEEGELFFRL---MIDQYS 498

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
                      F    S       +  MI    +NG  +E   A R + +    P+ +  
Sbjct: 499 -----------FTPAPS------HYACMIDMLGRNGRFDE---ALRMINDMPFEPDALIW 538

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L +C    N+++GK                                 AA+   ++ +
Sbjct: 539 KTLLASCKLHRNLDIGK--------------------------------LAADRLMELSD 566

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           ++S +Y  M   Y  HG  E A  + R M   G++ DA
Sbjct: 567 RDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA 604



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 6/171 (3%)

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           KSG +  A ++F ++P KN V +T+++ G  ++G  E AL++F  M   G+ P+     A
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L AC+  G +  G Q+  L  +            C+ +M  R G +  A E    + + 
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRA-GFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM-DS 177

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            +V+     +   CR +G  ELA   A+ L++M  +   P  H + + + A
Sbjct: 178 PDVVGYTSLISAFCR-NGEFELA---AEALIQMLKQGLKPNEHTMTTILTA 224


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 215/763 (28%), Positives = 387/763 (50%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  +     V W  +++ +V    P   + +Y +M+  S   SC++ T SSV+  C
Sbjct: 84  AMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR--SEGMSCNDNTMSSVISTC 141

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N  +G  V  H I+     +  V NSL++M+                    +   +
Sbjct: 142 VSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGY------------------FGSVE 183

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C VF  M   + ++WN++++ Y++     E++R F  M R+    ++ +   +     
Sbjct: 184 EACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCG 243

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+ + K    ++ L++K G  + +++  +++ I MY++ G  + A  +F   +E++   W
Sbjct: 244 SVDNLKWGRGIHSLVLKFG--WNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+M+  Y Q+ + ++A++L   +  +     + VTF SAL+A S  +    G+ LHA +I
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGA-NYVTFTSALAACSDPEFATEGKILHALVI 360

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
              +   VIV NA++                    +RD V+WN +I     +   DE L 
Sbjct: 361 HVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALK 420

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV---GKQTHAYLLRHGIHF-EGMESYLID 453
               M+++G  I+ +T++ +L A   L   D+   G   HA+++  G    E +++ LI 
Sbjct: 421 AFKLMREEGVPINYITISNVLGAC--LAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLIT 478

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G + ++  IF++  S  ++ + WNAM+A    +G +EEA     +M    V  + 
Sbjct: 479 MYAKCGDLNSSNNIFDRLTS--KNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDE 536

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            + +  L A   +  +E G+QLHG +++   D N FV ++ +DMY K G I+    +  +
Sbjct: 537 FSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPR 596

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              ++ +++  +   + +HG  E+A   F  M   G++PD +TFV++LSACS+ G+V+EG
Sbjct: 597 PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEG 656

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  +D M +E+ I     H  C+ D+LGR G+  EA  F+KE+        +W SLL +C
Sbjct: 657 LAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEM-PVSPTDHVWRSLLAAC 715

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           + HG+ EL     + LL++D  +     +VL SNI A  G WE+V+K+R++M    ++K+
Sbjct: 716 KTHGNLELGRKAVENLLKLDPSDDSA--YVLYSNICATTGKWEDVEKIRRQMGLNKIKKK 773

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   ++ F   D  HPQ+ +IY  LE L   ++ AG
Sbjct: 774 PACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAG 816



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 219/449 (48%), Gaps = 27/449 (6%)

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS-SLGDYKSADVVYGLLVKLG 256
           +S +V+   Y E++R F  M   G++PS I+  ++  A   S         V+G +VK+G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
              ++D+FV +S + +Y   G    A K+F   + +N   W  ++  YV    P   + +
Sbjct: 61  --LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNI 118

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---- 372
           + + +  + +  +D T  S +S    L+   LG Q+  ++IK  +   V V N++I    
Sbjct: 119 Y-RRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177

Query: 373 ----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                           E D +SWN+MI+A+++NGL  E L     M +    I+S T++ 
Sbjct: 178 YFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLST 237

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGD 475
           +L+   ++ N   G+  H+ +L+ G +     S  LI MY+ +G  + A  +F+     +
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQ--GMVE 295

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D  +WN+M+A Y Q+G   +A      M       N VT  S L AC+       GK L
Sbjct: 296 KDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKIL 355

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H   I   L +NV VG +L+ +Y+KSG++  A  VF  +P+++ VT+  +I G+      
Sbjct: 356 HALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEP 415

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + AL  F+ M+  G+  + IT   VL AC
Sbjct: 416 DEALKAFKLMREEGVPINYITISNVLGAC 444



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 200/420 (47%), Gaps = 14/420 (3%)

Query: 313 AIELFVQVLELDE-IVFDDVTFLSALSAVSQLQELDLGQQL-HAYIIKNFVALPVIVLNA 370
           A+   V   E  E ++ + V     +  V  L ++ +G  L H Y      A  + V   
Sbjct: 31  AVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQE 90

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           +I ++VVSW  ++ A+V  G     + +   M+ +G   +  T+++++S   +L N+ +G
Sbjct: 91  MIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLG 150

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
            Q   +++++G+     + + LI M+   G ++ A  +F   D  + D  +WN+MIA Y 
Sbjct: 151 YQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMD--EHDTISWNSMIAAYI 208

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           +NGL +E+   F  M   +   N  T++++L  C  + N++ G+ +H   +++  + NV 
Sbjct: 209 RNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVC 268

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
              +LI MYS +G    A  VF  + EK+ +++ +M+  Y Q G    AL L  +M    
Sbjct: 269 ASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMR 328

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
              + +TF + L+ACS      EG +I   +     +  +      +  +  + G ++EA
Sbjct: 329 RGANYVTFTSALAACSDPEFATEG-KILHALVIHVGLHENVIVGNALVTLYAKSGLMIEA 387

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV-VAKKLLEMDTRNSMPGYHVLLSNI 728
            +  + + +   V   W +L+G     GH++  E   A K  ++     +P  ++ +SN+
Sbjct: 388 KKVFQTMPKRDGV--TWNALIG-----GHADSEEPDEALKAFKLMREEGVPINYITISNV 440



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 107/211 (50%), Gaps = 8/211 (3%)

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL-GKQLHGFSIRYL 543
           ++G+ + G   E+   F +M +  V P+ + +AS++ AC     + + G Q+HGF ++  
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           L  +VFVGTSL+ +Y   G+   A  VF ++  KN V++T +++ Y  +G     ++++R
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDE--GLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
            M+  G+  +  T  +V+S C    L +E  G Q+   + + Y ++ +      +  M G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTC--VSLENELLGYQVLGHVIK-YGLETNVSVANSLISMFG 177

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
             G V EA      + E   +   W S++ +
Sbjct: 178 YFGSVEEACYVFSGMDEHDTI--SWNSMIAA 206


>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
          Length = 643

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 210/694 (30%), Positives = 350/694 (50%), Gaps = 81/694 (11%)

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ VH +  +   +   FV +SL +MY  C    DA                   KVFD 
Sbjct: 3   GRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDAR------------------KVFDE 44

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           +  RNVVAWN ++  YV+     EA+R    M   G+ P+ ++      A +++G  +  
Sbjct: 45  IPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEG 104

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
              + L V  G E  N   + +S +  Y ++G  D+A  +FD  + ++   WN +I GYV
Sbjct: 105 KXSHALAVVNGLELDN--ILGTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLISGYV 162

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           Q     +AI +  Q++ L+++ FD VT  + +S  ++ Q   LG+++  Y I++     +
Sbjct: 163 QQGLVEDAIRM-CQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDI 221

Query: 366 I--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           +                    V ++ +++D++ WNT+++A+ ++GL  E L L YEMQ +
Sbjct: 222 VLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLE 281

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
               + +T   ++ +                LLR+G   E  E +L      SG++ T  
Sbjct: 282 SVPPNVITWNLIILS----------------LLRNGQVDEAKEMFL--QMQSSGIVPTI- 322

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
                         +W  M+ G   NG  EEA    R+M E  + PNV +I   L AC  
Sbjct: 323 -------------VSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSACAN 369

Query: 526 MGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
           + ++  G+ +HG+ IR  L   +V + TSL+DMY+K G I+ A  VF +        Y  
Sbjct: 370 LASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNA 429

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI  Y  +G  E A++L+ S++  GI+PD ITF  +LSAC++AG +++ ++IF  M  ++
Sbjct: 430 MISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKH 489

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
            ++P  EHY  + D+L   G+  +A   ++E+  E +   I  SLL +C     +EL E 
Sbjct: 490 GVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQ-SLLATCNKEHKTELVEY 548

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG-- 762
           ++K+LLE +  NS  G +V +SN YA EG+W+ V K+R+ M+ +GL+K+ GCSWI V   
Sbjct: 549 LSKQLLESEPDNS--GNYVTISNAYAGEGSWDEVVKMREMMKAKGLKKQPGCSWIRVKRE 606

Query: 763 --GYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
               V  F + D+ H ++++I  ML  L  +MR+
Sbjct: 607 EEEXVQVFVANDKTHLRNNEIRRMLALLLXDMRS 640



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 270/570 (47%), Gaps = 71/570 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     V WN +++G+V N +  EAI L   M++     +    T S+ L A 
Sbjct: 38  ARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPT--RVTVSTCLSAS 95

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +  GK  H   +         +  S+LN Y           VGL    +DY++  
Sbjct: 96  ANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCK---------VGL----IDYAEM- 141

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VFD M  ++VV WN ++S YV+     +A+R  ++M    ++   ++   +    +
Sbjct: 142 ----VFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAA 197

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              + K    V    ++    + +D+ +AS+A+ MYA+ G    A+K+FD+ ++++  +W
Sbjct: 198 RTQNSKLGKEVQCYCIR--HSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILW 255

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++  Y ++    EA+ LF + ++L+ +  + +T+   + ++ +  ++D  +++   + 
Sbjct: 256 NTLLAAYAESGLSGEALRLFYE-MQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQ 314

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            + + +P I          VSW TM++  V NG  +E +  + +MQ+ G   +  ++T  
Sbjct: 315 SSGI-VPTI----------VSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVA 363

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LSA +NL +   G+  H Y++R+ +H     +E+ L+DMYAK G I  A ++F +     
Sbjct: 364 LSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFS- 422

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
            +   +NAMI+ Y   G +EEA   +  + +  + P+ +T  ++L ACN  G+I    ++
Sbjct: 423 -ELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEI 481

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
             FS                DM SK GV     +            Y  M+      G +
Sbjct: 482 --FS----------------DMVSKHGVKPCLEH------------YGLMVDLLASAGET 511

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACS 625
           E+AL L   M     EPDA    ++L+ C+
Sbjct: 512 EKALRLMEEMP---YEPDARMIQSLLATCN 538



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/445 (23%), Positives = 192/445 (43%), Gaps = 79/445 (17%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+       C   T
Sbjct: 131 CKVGLIDYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDC--VT 188

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            S+++   A T+N ++GK V C+ IR        + ++ ++MY+ C S +DA+       
Sbjct: 189 LSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAK------- 241

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      KVFD+  +++++ WNT+++ Y ++    EA+R F  M    + P+ I++
Sbjct: 242 -----------KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITW 290

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  +L   G    A  ++             L + SS I                   
Sbjct: 291 NLIILSLLRNGQVDEAKEMF-------------LQMQSSGIV------------------ 319

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
                  W TM+ G V N    EAI  +++ ++   +  +  +   ALSA + L  L  G
Sbjct: 320 --PTIVSWTTMMNGLVXNGCSEEAIH-YLRKMQESGMRPNVFSITVALSACANLASLHFG 376

Query: 350 QQLHAYIIKNFVALPVIVLNA-----------------VIERDVVS----WNTMISAFVQ 388
           + +H YII+N +    + +                   V  R + S    +N MISA+  
Sbjct: 377 RSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYAL 436

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGM 447
            G  +E + L   ++  G   D++T T +LSA ++  + +   +  + ++ +HG+    +
Sbjct: 437 YGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVK-PCL 495

Query: 448 ESY--LIDMYAKSGLIKTARQIFEK 470
           E Y  ++D+ A +G  + A ++ E+
Sbjct: 496 EHYGLMVDLLASAGETEKALRLMEE 520


>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
 gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 220/698 (31%), Positives = 347/698 (49%), Gaps = 102/698 (14%)

Query: 141 SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMR---RRNVVAW 194
           S+ V+++ +   + C + + A +V +      YS+Y LV    KVF +       N + W
Sbjct: 54  SKQVHSATVVTGAYCSAFVSARLVSI------YSRYGLVSDARKVFGSAPFECYSNFLLW 107

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N+I+   V     +EA++ +  M   G+     +F  +  A S+LG +     ++  +V+
Sbjct: 108 NSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVVQ 167

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G  + N L V +  I MYA+L   D ARK+FD    ++   WNTM+ GY  N     A 
Sbjct: 168 FG--FQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGAS 225

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER 374
            +F Q +EL+ +                                              E 
Sbjct: 226 RMFHQ-MELEGV----------------------------------------------EP 238

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           + V+W +++S+  + G  +E ++L  +M+ +G    +  +  +LS  ++L   + G+  H
Sbjct: 239 NPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIH 298

Query: 435 AYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFE----KN------------DSGDRD 477
            Y+++ G + +   ++ LI +Y K G +  A ++F     KN            +SG  D
Sbjct: 299 GYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYD 358

Query: 478 QA---------------------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           +A                     TW+A+I G+   GL EE+   FR+M   NV  N VTI
Sbjct: 359 KALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTI 418

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           ASVL  C  +  + LG+++HG  IR  +D NV VG  LI+MY+K G       VF K+  
Sbjct: 419 ASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLEN 478

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++S+++ +MI GYG HG+ + AL+ F  M   G  PD +TF+A LSACS+AGLV EG  +
Sbjct: 479 RDSISWNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWL 538

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M+Q +KI+P  EHY C+ D+LGR G V EA   +K +  E N   IW SLL SCR+H
Sbjct: 539 FSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGMPMEPNAY-IWSSLLNSCRMH 597

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             ++LAE  A K+  ++++  + G H+LLSNI+A    WE+  +VR   R +GL+K  G 
Sbjct: 598 KDTDLAEEAAAKISNLNSK--ITGSHMLLSNIFAASCRWEDSARVRISARAKGLKKVPGW 655

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           SWI+V   V  F +         K+ E+L  LA ++ N
Sbjct: 656 SWIEVKKKVYMFKAGYTISEGLEKVDEILHDLAFQIEN 693



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 216/545 (39%), Gaps = 125/545 (22%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSI---TRPTTVIWNTIIIGFV 81
           Q+HS +       +  + +RL  I  + G    AR++F S         ++WN+II   V
Sbjct: 56  QVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECYSNFLLWNSIIRANV 115

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            +    EA+ LY +M+        D +T+  +L+A +      + K +HCH ++      
Sbjct: 116 YHGYCIEALQLYGKMRNYGVLG--DGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNH 173

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             V N L+ MY+      DA                   KVFD MR ++VV+WNT+VS Y
Sbjct: 174 LHVGNELIGMYAKLERMDDAR------------------KVFDKMRIKSVVSWNTMVSGY 215

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVN------------------------------ 231
                   A R F  M   G+ P+ +++ +                              
Sbjct: 216 AYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTA 275

Query: 232 -----VFPALSSLGDYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKI 285
                V    + L    S  +++G +VK G    ND LF  ++ I +Y + G    A K+
Sbjct: 276 EMLAVVLSVCADLATLNSGQMIHGYMVKGG---FNDYLFAKNALITLYGKGGGVGDAEKL 332

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV------------------------- 320
           F     +N   WN +I  + ++    +A+EL  Q+                         
Sbjct: 333 FHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFAS 392

Query: 321 -------------LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                        ++L  +  + VT  S LS  + L  L+LG+++H ++I+  +   V+V
Sbjct: 393 KGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLV 452

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            N +I                     RD +SWN+MI+ +  +GL  + L     M K G+
Sbjct: 453 GNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIKSGY 512

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--LIDMYAKSGLIKTA 464
             D VT  A LSA S+      G    +  +R     E  +E Y  ++D+  ++GL++ A
Sbjct: 513 RPDGVTFIAALSACSHAGLVAEGHWLFSQ-MRQNFKIEPEIEHYACMVDLLGRAGLVEEA 571

Query: 465 RQIFE 469
             I +
Sbjct: 572 SNIIK 576


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 218/724 (30%), Positives = 364/724 (50%), Gaps = 54/724 (7%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           +F  +    T  WN+++ G + N L   +   + +M +SS     D  + S VL AC+  
Sbjct: 221 VFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSS--FQADEVSLSCVLSACSHL 278

Query: 121 RNL-RIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           ++L   G++VH   I+  + + +  V NSL+  Y        AE                
Sbjct: 279 KDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE---------------- 322

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             +VF +   +N+V WN ++   V+ +R  EA+  F+ M R   +P   + V +  A   
Sbjct: 323 --EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM-RSKNQPDVATLVTIISACGD 379

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
            G       V+G ++K G  Y  +  V +S + +Y +      AR +F     R+   WN
Sbjct: 380 RGLLPEGKEVHGYIIKKGHIY-EECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWN 438

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
           TMI GY +N+   E  +   + L  + +     T ++ + +    Q+L+ G+ +H++I+K
Sbjct: 439 TMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK 498

Query: 359 NFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLM 397
                 V   N++I                       D++SWNT I   VQNGL  + L 
Sbjct: 499 YGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALE 558

Query: 398 LVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
               M        DS+T+ ++LS   NL+ Q +GK  H   L+  I F   +++ L+ MY
Sbjct: 559 AFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMY 618

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            + G  ++A  IF  +    R+  +WN MI+G+ QN     A   +++M      PN ++
Sbjct: 619 FRFGDTESAELIF--SSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKM--EYFEPNEIS 674

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           I  ++ AC  +G++  GK +HG  +R+ L  NVF+  SL+DMYSK G ++ +  VF    
Sbjct: 675 IVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSA 734

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           EK+   + +MI  +G HG+  +++ +F  M   G++    TF+A+LSACS++GL DEGL+
Sbjct: 735 EKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLK 794

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            + LM + + I P+ EH+ CV DMLGR G++ EA++FV+ L  +     +WG+LL +C  
Sbjct: 795 YYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSK-QAHGVWGALLSACSK 853

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
               ++ E VAK LL ++  NS  GY+V +SN+YA +  W    +VR  ++++GL K  G
Sbjct: 854 KSELKMCESVAKHLLCLEPENS--GYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRG 911

Query: 756 CSWI 759
            S I
Sbjct: 912 RSII 915



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 176/695 (25%), Positives = 317/695 (45%), Gaps = 65/695 (9%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L PP+ +    T  SR+  +C       A Q+FD    P  ++WN  I     N    +A
Sbjct: 96  LDPPV-RTSVITAYSRVRDVCS------ALQVFDEAAAPDLILWNAAISALTLNCRYGDA 148

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           ++L+  M         D+ +   +L   +  R+L  G A H   ++   +    ++N+L+
Sbjct: 149 VVLFRWMVD--VLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLM 206

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           +MY+ C     +E+                  VF  M  R+  +WN++VS  +       
Sbjct: 207 DMYAKCGDFYSSEV------------------VFQRMPYRDTTSWNSMVSGSLFNGLAEI 248

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGD-YKSADVVYGLLVKLGSEYVNDLFVASS 268
           +   F+ M+R   +   +S   V  A S L D +   + V+  ++KLG E      V +S
Sbjct: 249 SAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTS-SVENS 307

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I  Y ELG  + A ++F +   +N   WN MI G V+N+   EA+ +F ++   ++   
Sbjct: 308 LITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQP-- 365

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIK---------------------NFVALPVIV 367
           D  T ++ +SA      L  G+++H YIIK                     N  +   I+
Sbjct: 366 DVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARIL 425

Query: 368 LNAVIERDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
              +  RD++SWNTMIS + +N  L +E   +   +  +G      TV A++ +    ++
Sbjct: 426 FRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQD 485

Query: 427 QDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
            + GK  H+++L++G    G+ +   LI MY   G    A  + E + +   D  +WN  
Sbjct: 486 LNFGKSVHSFILKYGF-LTGVSAANSLIHMYICCGDSLAAFSLLE-SITPMSDIISWNTA 543

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           I G  QNGL  +A  AF Q +   +T  P+ +T+ SVL  C  +    LGK +H  +++ 
Sbjct: 544 IVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKR 602

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           L++ N+ V  +L+ MY + G    A  +F+ +  +N  ++  MI G+ Q+    RAL  +
Sbjct: 603 LIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFY 662

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
           + M+    EP+ I+ V ++ AC+  G + +G  I   + + + +Q +      + DM  +
Sbjct: 663 KKME--YFEPNEISIVGIICACTQLGDLRQGKNIHGHVVR-FGLQTNVFISASLVDMYSK 719

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
            G++  +    +   E+   +  W S++ +   HG
Sbjct: 720 CGRLDISIRVFESSAEKS--IACWNSMISAFGFHG 752



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 30/408 (7%)

Query: 243 KSADVVYGL-LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           + AD V  L    L S  V D  V +S I  Y+ +     A ++FD     +  +WN  I
Sbjct: 77  EEADGVAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAI 136

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
                N    +A+ LF  ++++   VFD  + +  LS  S+ + L+ G   H   +K  +
Sbjct: 137 SALTLNCRYGDAVVLFRWMVDVLG-VFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRL 195

Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
              + + N +++                    RD  SWN+M+S  + NGL +       E
Sbjct: 196 DTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTHAYLLRHGIH--FEGMESYLIDMYAKS 458
           M +  F  D V+++ +LSA S+L++    G+  H+ +++ G       +E+ LI  Y + 
Sbjct: 256 MVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYEL 315

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G  + A ++F    + +++  TWNAMI G  +N  + EA   F++M   N  P+V T+ +
Sbjct: 316 GFPEAAEEVFLS--TSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVT 372

Query: 519 VLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           ++ AC   G +  GK++HG+ I+   + +   VG SL+D+Y K    + A  +F  +P +
Sbjct: 373 IISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMR 432

Query: 578 NSVTYTTMILGYGQH-GMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           + +++ TMI GY ++  + E A ++F+ +   G+     T VAV+ +C
Sbjct: 433 DLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSC 480



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 156/308 (50%), Gaps = 25/308 (8%)

Query: 58  ARQLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A  L +SIT  + +I WNT I+G V N L  +A+  + Q   S+   + D+ T  SVL  
Sbjct: 524 AFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSV 582

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C   +   +GK++HC  ++     +  V N+LL MY     +  AE+             
Sbjct: 583 CGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAEL------------- 629

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +F ++  RN+ +WN ++S + +    + A++ ++ M      P+ IS V +  A 
Sbjct: 630 -----IFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEY--FEPNEISIVGIICAC 682

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LGD +    ++G +V+ G +   ++F+++S + MY++ G  D + ++F++  E++   
Sbjct: 683 TQLGDLRQGKNIHGHVVRFGLQ--TNVFISASLVDMYSKCGRLDISIRVFESSAEKSIAC 740

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+MI  +  +   +++IE+F + +    +     TF++ LSA S     D G + +  +
Sbjct: 741 WNSMISAFGFHGLGLKSIEIFWK-MNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLM 799

Query: 357 IKNFVALP 364
           I++F  +P
Sbjct: 800 IEHFGIIP 807



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 22/202 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A  +F S+       WN +I GF  NN    A+  Y +M+   P    +  +   
Sbjct: 622 GDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEYFEP----NEISIVG 677

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           ++ AC +  +LR GK +H H +R     + F+  SL++MYS C                 
Sbjct: 678 IICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKC----------------- 720

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
             + D+  +VF++   +++  WN+++S +      ++++  F  M   G++ +  +F+ +
Sbjct: 721 -GRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIAL 779

Query: 233 FPALSSLGDYKSADVVYGLLVK 254
             A S  G        Y L+++
Sbjct: 780 LSACSHSGLTDEGLKYYHLMIE 801


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 185/486 (38%), Positives = 275/486 (56%), Gaps = 36/486 (7%)

Query: 338 SAVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVIE--------------------RDV 376
           SAVS  Q   LG+  HA IIK     LP  + N ++                     R V
Sbjct: 15  SAVST-QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSV 73

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           V+W  +I+  VQNG     L     M++     +  T      A+ +LR+  VGKQ HA 
Sbjct: 74  VTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHAL 133

Query: 437 LLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            ++ G     F G  ++  DMY+K+GL + AR++F+  +  +R+ ATWNA ++     G 
Sbjct: 134 AVKAGQISDVFVGCSAF--DMYSKAGLTEEARKMFD--EMPERNIATWNAYLSNSVLEGR 189

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            ++A  AF +  +  + P    ++SVL AC  +  +E+GK +H  +++  +  N+FVG++
Sbjct: 190 YDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSA 249

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG---I 610
           L+DMY K G I  A   F ++PE+N VT+  MI GY   G ++ A++LF  M  CG   +
Sbjct: 250 LVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMT-CGSHRV 308

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P+ +TFV VLSACS AG V+ G++IF+ M+  Y I+P  EHY CV D+LGR G V +AY
Sbjct: 309 APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAY 368

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           +F+K++     V  +WG+LLG+ ++ G SEL +V A  L E+D  +S  G HVLLSN++A
Sbjct: 369 QFIKKMPIRPTV-SVWGALLGASKMFGKSELGKVAADNLFELDPLDS--GNHVLLSNMFA 425

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
             G WE    VRKEM++ G++K  GCSWI  G  V+ F +KD  H ++ +I  ML +L  
Sbjct: 426 AAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRG 485

Query: 791 EMRNAG 796
           EM  AG
Sbjct: 486 EMEAAG 491



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 189/424 (44%), Gaps = 49/424 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + +S++++   T+  R+G+A H   I+   NP   F+YN L+NMYS       A++    
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQL---- 63

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                         +      R+VV W  +++  V+  R+  A+  F  M R  I+P+  
Sbjct: 64  --------------LLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDF 109

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +F   F A  SL        V+ L VK G   ++D+FV  SA  MY++ G  + ARK+FD
Sbjct: 110 TFPCAFKASGSLRSPLVGKQVHALAVKAGQ--ISDVFVGCSAFDMYSKAGLTEEARKMFD 167

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN  +   V      +A+  F++  + + I   D    S LSA + L  L+
Sbjct: 168 EMPERNIATWNAYLSNSVLEGRYDDALTAFIEARK-EGIEPTDFMVSSVLSACAGLSVLE 226

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           +G+ +H   +K  V   + V +A++                    ER++V+WN MI  + 
Sbjct: 227 VGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYA 286

Query: 388 QNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHF 444
             G  D  + L  EM      +  + VT   +LSA S   + +VG +    +  R+GI  
Sbjct: 287 HQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIE- 345

Query: 445 EGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            G E Y  ++D+  ++G+++ A Q F K        + W A++      G  E   VA  
Sbjct: 346 PGAEHYACVVDLLGRAGMVEQAYQ-FIKKMPIRPTVSVWGALLGASKMFGKSELGKVAAD 404

Query: 503 QMLE 506
            + E
Sbjct: 405 NLFE 408



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 196/464 (42%), Gaps = 42/464 (9%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLP 86
           I +L  P+P      + +  SK+    RP+ A+ L       + V W  +I G V N   
Sbjct: 33  IKTLDNPLPSFIYNHLVNMYSKL---DRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRF 89

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
             A+  +S M++ S     +++T+    KA    R+  +GK VH   ++       FV  
Sbjct: 90  TSALFHFSNMRRDS--IQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGC 147

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           S  +MYS    + +A                   K+FD M  RN+  WN  +S  V   R
Sbjct: 148 SAFDMYSKAGLTEEAR------------------KMFDEMPERNIATWNAYLSNSVLEGR 189

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
           Y +A+  F    + GI P+     +V  A + L   +    V+ L VK  +  V ++FV 
Sbjct: 190 YDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVK--ACVVGNIFVG 247

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV-LELDE 325
           S+ + MY + G  + A + FD   ERN   WN MIGGY        A+ LF ++      
Sbjct: 248 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 307

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
           +  + VTF+  LSA S+   +++G ++   +   +           IE     +  ++  
Sbjct: 308 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY----------GIEPGAEHYACVVDL 357

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
             + G+ ++     Y+  K+  +  +V+V  ALL A+      ++GK     L       
Sbjct: 358 LGRAGMVEQ----AYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLD 413

Query: 445 EGMESYLIDMYAKSGLIKTARQIF-EKNDSGDRDQATWNAMIAG 487
            G    L +M+A +G  + A  +  E  D G +  A  + + AG
Sbjct: 414 SGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 457


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 326/598 (54%), Gaps = 31/598 (5%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD +   +   W  I+  Y       E ++ + ++++ G     I F     A + + D
Sbjct: 110 VFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQD 169

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
             +   ++  +VK+ S    D  V +  + MYA+ G    + K+F++   RN   W +MI
Sbjct: 170 LDNGKKIHCQIVKVPS---FDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMI 226

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GYV+N+   E + LF ++ E + ++ ++ T+ + + A ++L+ L  G+  H  +IK+ +
Sbjct: 227 AGYVKNDLYEEGLVLFNRMRE-NSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGI 285

Query: 362 ALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYE 401
            L   ++ ++++                     D+V W  MI  +  NG  +E L L  +
Sbjct: 286 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 345

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLI 461
           M   G   + VT+ ++LS    + N ++G+  H   ++ GI    + + L+ MYAK    
Sbjct: 346 MSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVANALVHMYAKCYQN 405

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           + A+ +FE     ++D   WN++I+G++QNG + EA   F +M   +V PN VT+AS+  
Sbjct: 406 RDAKYVFEMES--EKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFS 463

Query: 522 ACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           AC  +G++ +G  LH +S++  +L   +V VGT+L+D Y+K G    A  +F  I EKN+
Sbjct: 464 ACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNT 523

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           +T++ MI GYG+ G ++ +L LF  M     +P+  TF +VLSACS+ G+V+EG + F  
Sbjct: 524 ITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSS 583

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M ++Y   PST+HY C+ DML R G++ +A + ++++  + +V   +G+ L  C +H   
Sbjct: 584 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV-RCFGAFLHGCGMHSRF 642

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           +L E+V KK+L++   ++   Y+VL+SN+YA +G W    +VR  M++RGL K  G S
Sbjct: 643 DLGEIVIKKMLDLHPDDA--SYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHS 698



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 291/621 (46%), Gaps = 75/621 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ-MKKSSPYTSCDNYTYSSVLKA 116
           AR +FD I  P   +W  I+  +  NN  +E I  Y   MK    Y   D+  +S  LKA
Sbjct: 107 ARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGY---DDIVFSKALKA 163

Query: 117 CAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           C E ++L  GK +HC  ++   F N    V   LL+MY+ C             ++  Y 
Sbjct: 164 CTEVQDLDNGKKIHCQIVKVPSFDN---VVLTGLLDMYAKC-----------GEIKSSY- 208

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVF+ +  RNVV W ++++ YVK + Y E +  F  M    +  +  ++  +  
Sbjct: 209 ------KVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVM 262

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L         +G L+K G E  + L   +S + MY + G    AR++F+     + 
Sbjct: 263 ACTKLRALHQGKWFHGCLIKSGIELSSCL--VTSLLDMYVKCGDISNARRVFNEHSHVDL 320

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +W  MI GY  N    EA+ LF Q +    I  + VT  S LS    +  L+LG+ +H 
Sbjct: 321 VMWTAMIVGYTHNGSVNEALSLF-QKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHG 379

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
             IK  +     V NA++                    E+D+V+WN++IS F QNG   E
Sbjct: 380 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 438

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG------IHFEGME 448
            L L + M  +  M + VTV +L SA ++L +  +G   HAY ++ G      +H   + 
Sbjct: 439 ALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVH---VG 495

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + L+D YAK G  ++AR IF+  +  +++  TW+AMI GY + G  + +   F +ML+  
Sbjct: 496 TALLDFYAKCGDAESARLIFDTIE--EKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQ 553

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----LIDMYSKSGVI 564
             PN  T  SVL AC+  G +  GK+   FS  Y  D N    T     ++DM +++G +
Sbjct: 554 QKPNESTFTSVLSACSHTGMVNEGKKY--FSSMY-KDYNFTPSTKHYTCMVDMLARAGEL 610

Query: 565 NYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
             A ++  K+P +  V  +   + G G H   +    + + M    + PD  ++  ++S 
Sbjct: 611 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM--LDLHPDDASYYVLVSN 668

Query: 624 CSYA--GLVDEGLQIFDLMQQ 642
             YA  G   +  ++ +LM+Q
Sbjct: 669 L-YASDGRWSQAKEVRNLMKQ 688



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/502 (30%), Positives = 246/502 (49%), Gaps = 35/502 (6%)

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F  LS   +  S    +G+L   G+  + D+ +A+  + +Y   G    AR +FD   E 
Sbjct: 60  FLLLSKCTNIDSLRQAHGVLT--GNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEP 117

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W  ++  Y  NN   E I+ F  +L      +DD+ F  AL A +++Q+LD G+++
Sbjct: 118 DFYLWKVILRCYCLNNESFEVIK-FYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKI 176

Query: 353 HAYIIK-----NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
           H  I+K     N V   ++              V   +  R+VV W +MI+ +V+N L +
Sbjct: 177 HCQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYE 236

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           EGL+L   M++   + +  T   L+ A + LR    GK  H  L++ GI     + + L+
Sbjct: 237 EGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLL 296

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G I  AR++F  N+    D   W AMI GYT NG + EA   F++M    + PN
Sbjct: 297 DMYVKCGDISNARRVF--NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPN 354

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VTIASVL  C  +GN+ELG+ +HG SI+  + D N  V  +L+ MY+K      A  VF
Sbjct: 355 CVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVF 412

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
               EK+ V + ++I G+ Q+G    AL LF  M    + P+ +T  ++ SAC+  G + 
Sbjct: 413 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLA 472

Query: 632 EGLQIFDLMQQEYKIQPSTEHY-CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            G  +     +   +  S+ H    + D   + G   E+   + +  EE N +  W +++
Sbjct: 473 IGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD-AESARLIFDTIEEKNTI-TWSAMI 530

Query: 691 GSCRLHGHS----ELAEVVAKK 708
           G     G +    EL E + KK
Sbjct: 531 GGYGKQGDTKGSLELFEEMLKK 552



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 218/470 (46%), Gaps = 48/470 (10%)

Query: 25  PQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
            +IH     +P      +   L    + G    + ++F+ IT    V W ++I G+V N+
Sbjct: 174 KKIHCQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKND 233

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L  E ++L+++M+++S     + YTY +++ AC + R L  GK  H   I+     S  +
Sbjct: 234 LYEEGLVLFNRMRENSVLG--NEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCL 291

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SLL+MY  C    +A                   +VF+     ++V W  ++  Y   
Sbjct: 292 VTSLLDMYVKCGDISNAR------------------RVFNEHSHVDLVMWTAMIVGYTHN 333

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
               EA+  F+ M  +GI+P+ ++  +V      +G+ +    ++GL +K+G   + D  
Sbjct: 334 GSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVG---IWDTN 390

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           VA++ + MYA+      A+ +F+   E++   WN++I G+ QN    EA+ LF   +  +
Sbjct: 391 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF-HRMNTE 449

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI----------------- 366
            ++ + VT  S  SA + L  L +G  LHAY +K  F+A   +                 
Sbjct: 450 SVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAE 509

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               + + + E++ ++W+ MI  + + G     L L  EM K+    +  T T++LSA S
Sbjct: 510 SARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACS 569

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           +    + GK+  + + +        + Y  ++DM A++G ++ A  I EK
Sbjct: 570 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEK 619


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 202/679 (29%), Positives = 353/679 (51%), Gaps = 54/679 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y S+L   A T+++   KA+HCH I      S  + ++L   Y+ C              
Sbjct: 18  YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALC-------------G 63

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR--PSTI 227
            + Y++     K+F+ M + +++++N ++  YV+   Y +A+  F  M+  G++  P   
Sbjct: 64  HITYAR-----KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  V  A   L   K   VV+G +++  S +  D +V ++ + MY   G  + AR +FD
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILR--SWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   WNTMI GY +N +  +A+ +F  ++  + +  D  T +S L     L++L+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-ESVDLDHATIVSMLPVCGHLKDLE 235

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           +G+ +H  + +  +   + V NA++                     RDV++W  MI+ + 
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           ++G  +  L L   MQ +G   ++VT+ +L+S   +    + GK  H + +R  ++ + +
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355

Query: 448 -ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            E+ LI MYAK   +    ++F  + +       W+A+IAG  QN L+ +A   F++M  
Sbjct: 356 IETSLISMYAKCKRVDLCFRVF--SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            +V PN+ T+ S+LPA   + ++     +H +  +     ++   T L+ +YSK G +  
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473

Query: 567 AANVFAKIPEKNS----VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           A  +F  I EK+     V +  +I GYG HG    AL +F  M   G+ P+ ITF + L+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS++GLV+EGL +F  M + YK    + HY C+ D+LGR G++ EAY  +  +  E   
Sbjct: 534 ACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS 593

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             +WG+LL +C  H + +L E+ A KL E++  N+  G +VLL+NIYA  G W++++KVR
Sbjct: 594 -TVWGALLAACVTHENVQLGEMAANKLFELEPENT--GNYVLLANIYAALGRWKDMEKVR 650

Query: 743 KEMRERGLRKEVGCSWIDV 761
             M   GLRK+ G S I++
Sbjct: 651 SMMENVGLRKKPGHSTIEI 669



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 155/645 (24%), Positives = 296/645 (45%), Gaps = 97/645 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR+LF+ + + + + +N +I  +V   L ++AI ++ +M         D YTY  
Sbjct: 63  GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V KA  E +++++G  VH   +R +    ++V N+LL MY                  ++
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMY------------------MN 164

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + K ++   VFD M+ R+V++WNT++S Y +     +A+  F  M+   +     + V++
Sbjct: 165 FGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSM 224

Query: 233 FPALSSLGDYKSADVVYGLL--VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            P    L D +    V+ L+   +LG    + + V ++ + MY + G  D AR +FD   
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLG----DKIEVKNALVNMYLKCGRMDEARFVFDRME 280

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   W  MI GY ++     A+EL  ++++ + +  + VT  S +S      +++ G+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            LH + ++  V   +I+  ++I                    +     W+ +I+  VQN 
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
           L  + L L   M+++    +  T+ +LL A + L +       H YL + G        +
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459

Query: 450 YLIDMYAKSGLIKTARQIF----EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            L+ +Y+K G +++A +IF    EK+ S  +D   W A+I+GY  +G    A   F +M+
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKS--KDVVLWGALISGYGMHGDGHNALQVFMEMV 517

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY---LLDQNVFVGTSLIDMYSKSG 562
              VTPN +T  S L AC+  G +E G  L  F + +   L   N +  T ++D+  ++G
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY--TCIVDLLGRAG 575

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A N+   IP                                   EP +  + A+L+
Sbjct: 576 RLDEAYNLITTIP----------------------------------FEPTSTVWGALLA 601

Query: 623 ACSYAGLVDEGLQIFDLMQQE-YKIQP-STEHYCCVADMLGRVGK 665
           AC    +  E +Q+ ++   + ++++P +T +Y  +A++   +G+
Sbjct: 602 AC----VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 219/763 (28%), Positives = 368/763 (48%), Gaps = 54/763 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LF  +     V W  +++    N    E +  Y QM++      C+   +++V+  C
Sbjct: 98  ARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREG--VPCNANAFATVVSLC 155

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               N   G  V  H I         V NSL+ M+       DAE               
Sbjct: 156 GSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAE--------------- 200

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              K+FD M   + ++ N ++S Y       +    F  M   G+RP   +  ++    +
Sbjct: 201 ---KLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 257

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S   +     ++ L ++  S   + + V ++ + MY+  G    A  +F N   R+   W
Sbjct: 258 SADHFSHGSGIHSLCLR--SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 315

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMI  YVQN +  +A++   Q+   +EI  + +TF SAL A S    L  G+ +HA ++
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNEIP-NHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   ++V N++I                      DVVS+N +I  +       + + 
Sbjct: 375 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQ 434

Query: 398 LVYEMQKQGFMIDSVTVTAL---LSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
           +   ++  G   + +T+  +    +++++L N   G+  HAY++R G +  E + + LI 
Sbjct: 435 VFSWIRSAGIKPNYITMINIHGSFTSSNDLHN--YGRPLHAYIIRTGFLSDEYVANSLIT 492

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G ++++  IF  N   +++  +WNA+IA   Q G  EEA   F  M       + 
Sbjct: 493 MYAKCGNLESSTNIF--NSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDR 550

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           V +A  L +C  + ++E G QLHG  ++  LD + +V  + +DMY K G +N    +   
Sbjct: 551 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPD 610

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              +    + T+I GY ++G  + A   F+ M   G +PD +TFVA+LSACS+AGLVD+G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKG 670

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  ++ M   + + P  +H  C+ D+LGR+G+  EA  F++E+    N L IW SLL S 
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDL-IWRSLLSSS 729

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R H + E+    AKKLLE+D  +     +VLLSN+YA    W +VDK+R  M+   + K 
Sbjct: 730 RTHKNLEIGRKAAKKLLELDPFDDSA--YVLLSNLYATNARWVDVDKLRSHMKTININKR 787

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ H  + KIY  L+ + +++R  G
Sbjct: 788 PACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 830



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 205/459 (44%), Gaps = 29/459 (6%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG---DY 242
           M  R    W T VS  V+  R V A    R M   G+  S  +  ++  A    G     
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                ++ L  + G   + ++++ ++ + +Y   G    AR++F    ERN   W  ++ 
Sbjct: 61  ACGAAIHALTHRAG--LMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMV 118

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
               N +  E +  + Q +  + +  +   F + +S    L+    G Q+ +++I + + 
Sbjct: 119 ALSSNGYLEETLRAYRQ-MRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             V V N++I                    E D +S N MIS +   G+  +  ++  +M
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +  G   D+ T+ +L+S  ++  +   G   H+  LR  +     + + L++MY+ +G +
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             A  +F   +   RD  +WN MI+ Y QN    +A     Q+   N  PN +T +S L 
Sbjct: 298 SDAEFLFW--NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALG 355

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC+  G +  GK +H   ++  L +N+ VG SLI MY K   +  A  VF  +P  + V+
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS 415

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           Y  +I GY       +A+ +F  ++  GI+P+ IT + +
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI 454



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 12/215 (5%)

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG---NIEL 531
           DR  +TW   ++G  + G    AF   R M E  V  +   +AS++ AC   G    I  
Sbjct: 3   DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G  +H  + R  L  NV++GT+L+ +Y   G+++ A  +F ++PE+N V++T +++    
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           +G  E  L  +R M+  G+  +A  F  V+S C        GLQ+       + I    +
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQV-----ASHVIVSGLQ 177

Query: 652 HYCCVAD----MLGRVGKVVEAYEFVKELGEEGNV 682
           +   VA+    M G +G+V +A +    + E   +
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTI 212


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 214/699 (30%), Positives = 348/699 (49%), Gaps = 55/699 (7%)

Query: 128 AVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR 187
           A HC  I+  S    +  N+L+  Y+ C     A                   +VFD M 
Sbjct: 14  ATHCRAIKLGSIADPYTANNLITSYAKCTELNSAH------------------QVFDEMP 55

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
            R+ V+WN I+S +  +       +    M R      + +F ++   ++ +G  K    
Sbjct: 56  HRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQ 115

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ +++K+G     ++F  S+ + MYA+ G  D    +F +  ERN   WNT++  Y + 
Sbjct: 116 LHSVMLKVGLS--ENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRV 173

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                A  + +  +EL+ +  DD T    L+ +       L  QLH  I+K+ + L   V
Sbjct: 174 GDCDMAFWV-LSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTV 232

Query: 368 LNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
            NA I                      RD+V+WN+M+ A++ +  +D    +  +MQ  G
Sbjct: 233 CNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFG 292

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK--SGLIKT 463
           F  D+ T T ++ A S   ++  GK  H  +++ G+     + + LI MY +     ++ 
Sbjct: 293 FEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMED 352

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           A +IF   D   +D  TWN+++AGY Q GL E+A   F QM    +  +  T ++V+ +C
Sbjct: 353 ALRIFFSMDL--KDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSC 410

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           + +  ++LG+Q H  +++   D N +VG+SLI MYSK G+I  A   F    + N++ + 
Sbjct: 411 SDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWN 470

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           ++I GY QHG    AL LF  MK   ++ D ITFVAVL+ACS+ GLV+EG    + M+ +
Sbjct: 471 SIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESD 530

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           + I P  EHY C  D+ GR G + +A   V+ +  E + + +  +LLG+CR  G  ELA 
Sbjct: 531 FGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAM-VLKTLLGACRFCGDIELAS 589

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
            +AK LLE++        +V+LS +Y     W     V + MRERG++K  G SWI+V  
Sbjct: 590 QIAKILLELEPEEHCT--YVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKN 647

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQN 802
            V+ F ++D  HPQ  +IY +L++L     N G K   N
Sbjct: 648 NVHAFNAEDHSHPQCEEIYILLQQL-----NEGIKLFDN 681



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 178/655 (27%), Positives = 290/655 (44%), Gaps = 100/655 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+FD +    TV WN II  F  +        L   M++S+   + D+ T+ S+LK  
Sbjct: 47  AHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTH--AFDSRTFGSILKGV 104

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    L++G+ +H   ++   + + F  ++LL+MY+ C    D       YV        
Sbjct: 105 AYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDG------YV-------- 150

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF +M  RN V+WNT+V+ Y    R  +    F ++  M +    I    V P L+
Sbjct: 151 ----VFQSMPERNYVSWNTLVASY---SRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLT 203

Query: 238 SLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERN 293
            L +   YK    ++  +VK G E  N   V ++ I  Y+E      A ++FD   L R+
Sbjct: 204 LLDNAMFYKLTMQLHCKIVKHGLELFNT--VCNATITAYSECCSLQDAERVFDGAVLCRD 261

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDLGQQ 351
              WN+M+G Y+ +     A ++F   L++    F  D  T+   + A S  +    G+ 
Sbjct: 262 LVTWNSMLGAYLMHEKEDLAFKVF---LDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKC 318

Query: 352 LHAYIIKNFVALPVIVLNAVIE----------------------RDVVSWNTMISAFVQN 389
           LH  +IK  +   V V NA+I                       +D  +WN++++ +VQ 
Sbjct: 319 LHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQV 378

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           GL ++ L L  +M+     ID  T +A++ + S+L    +G+Q H   L+ G      + 
Sbjct: 379 GLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVG 438

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           S LI MY+K G+I+ AR+ FE   +  +D A  WN++I GY Q+G    A   F  M E 
Sbjct: 439 SSLIFMYSKCGIIEDARKSFE---ATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKER 495

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            V  + +T  +VL AC+  G +E G                     +  M S  G     
Sbjct: 496 KVKLDHITFVAVLTACSHNGLVEEGCNF------------------IESMESDFG----- 532

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
                 IP +    Y   I  YG+ G  ++A +L  +M     EPDA+    +L AC + 
Sbjct: 533 ------IPPRQE-HYACAIDLYGRAGHLKKATALVETMP---FEPDAMVLKTLLGACRFC 582

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEH--YCCVADMLGRVGKVVEAYEFVKELGEEG 680
           G ++   QI  ++ +   ++P  EH  Y  +++M GR     E     + + E G
Sbjct: 583 GDIELASQIAKILLE---LEPE-EHCTYVILSEMYGRFKMWGEKASVTRMMRERG 633


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 182/504 (36%), Positives = 300/504 (59%), Gaps = 37/504 (7%)

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI----------- 366
           +Q LE++   +D V  L+   + + ++E   GQ++HA++IK     PV            
Sbjct: 3   IQGLEVEFQGYDSV--LTECISQTAIRE---GQRVHAHMIKTCYEPPVYLRTRLIVLYNK 57

Query: 367 ---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                    VL+ + ER+VVSW  MIS + Q G   E L L  EM   G   +  T   +
Sbjct: 58  CRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 117

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSG 474
           L++ ++     +G+Q H+ +++    FE    + S L+DMYAK+G I  AR++F  +   
Sbjct: 118 LTSCTSSSGFQLGRQIHSLVIK--TSFESHIFVGSSLLDMYAKAGKICEARRVF--DGLP 173

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           +RD  +  A+I+GY Q GL EEA   FR++    +  N VT ASVL A + +  ++ G+Q
Sbjct: 174 ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 233

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H   +R  L   V +  SLIDMYSK G + Y+  +F  +PE+  +++  M++GY +HG+
Sbjct: 234 VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 293

Query: 595 SERALSLFRSMK-GCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEH 652
              A+ LF+ MK    ++PD++TF+AVLS CS+ G+ D GL+IF +++ Q+   +P  EH
Sbjct: 294 GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 353

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y CV D+ GR G+V EA+EF+K++  E     IWGSLLG+CR+H +  + E VA++LLE+
Sbjct: 354 YGCVVDLFGRAGRVEEAFEFIKKMPFEPTA-AIWGSLLGACRVHQNVHIGEFVARRLLEI 412

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           ++ N+  G +V+LSN+YA  G W++V  VR+ M+E+ + KE G SWI++   ++ F + D
Sbjct: 413 ESENA--GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASD 470

Query: 773 QEHPQSHKIYEMLERLAMEMRNAG 796
           + HP+  +++  +  L+++++ AG
Sbjct: 471 RSHPRKEEVFAKVRELSIKIKEAG 494



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 39/360 (10%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           Y   +++ +  I +Y +  C   AR++ D   ERN   W  MI GY Q  +  EA+ LFV
Sbjct: 41  YEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFV 100

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------ 366
           ++L +     ++ TF + L++ +      LG+Q+H+ +IK       FV   ++      
Sbjct: 101 EML-MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA 159

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V + + ERDVVS   +IS + Q GLD+E L L   +Q++G   + VT  ++L
Sbjct: 160 GKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVL 219

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           +A S L   D G+Q H+++LR  + F   +++ LIDMY+K G +  +R+IF+     +R 
Sbjct: 220 TALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMP--ERT 277

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELG---- 532
             +WNAM+ GY+++GL  EA   F+ M E N V P+ VT  +VL  C+  G  + G    
Sbjct: 278 VISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIF 337

Query: 533 ----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
                Q  GF      +  +     ++D++ ++G +  A     K+P + +      +LG
Sbjct: 338 YEMVNQKDGF------EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 391



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 219/453 (48%), Gaps = 50/453 (11%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y SVL  C     +R G+ VH H I+    P  ++   L+ +Y+ C    DA        
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDAR------- 65

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +V D M  RNVV+W  ++S Y +     EA+  F  ML  G  P+  +F
Sbjct: 66  -----------RVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTF 114

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             V  + +S   ++    ++ L++K  + + + +FV SS + MYA+ G    AR++FD  
Sbjct: 115 ATVLTSCTSSSGFQLGRQIHSLVIK--TSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 172

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ER+      +I GY Q     EA++LF + L+ + +  + VT+ S L+A+S L  LD G
Sbjct: 173 PERDVVSCTAIISGYAQLGLDEEALDLF-RRLQREGMRSNYVTYASVLTALSGLAALDHG 231

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           +Q+H+++++  +   V++ N++I                    ER V+SWN M+  + ++
Sbjct: 232 RQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKH 291

Query: 390 GLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           GL  E + L   M+++  +  DSVT  A+LS  S+   +D G +    ++     FE  +
Sbjct: 292 GLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEI 351

Query: 448 ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG--YTQNGLLEEAFVAFRQ 503
           E Y  ++D++ ++G ++ A + F K    +   A W +++      QN  + E FVA R 
Sbjct: 352 EHYGCVVDLFGRAGRVEEAFE-FIKKMPFEPTAAIWGSLLGACRVHQNVHIGE-FVARRL 409

Query: 504 M-LEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           + +E     N V ++++  +     ++   ++L
Sbjct: 410 LEIESENAGNYVILSNLYASAGRWDDVRTVREL 442



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 195/419 (46%), Gaps = 41/419 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++ D +     V W  +I G+       EA+ L+ +M  S   T+ + +T+++VL +C
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSG--TAPNEFTFATVLTSC 121

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             +   ++G+ +H   I+       FV +SLL+MY+      +A                
Sbjct: 122 TSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEAR--------------- 166

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD +  R+VV+   I+S Y +     EA+  FR + R G+R + +++ +V  ALS
Sbjct: 167 ---RVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 223

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        V+  +++    +   + + +S I MY++ G   ++R+IFD+  ER    W
Sbjct: 224 GLAALDHGRQVHSHVLRAKLPFY--VVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISW 281

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+ GY ++    EA+ELF  + E +++  D VTFL+ LS  S     D G ++   ++
Sbjct: 282 NAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMV 341

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                          E ++  +  ++  F + G  +E    +   +K  F   +    +L
Sbjct: 342 NQ---------KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI---KKMPFEPTAAIWGSL 389

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGL---IKTARQIFEKN 471
           L A    +N  +G+     LL   I  E   +Y+I  ++YA +G    ++T R++ ++ 
Sbjct: 390 LGACRVHQNVHIGEFVARRLLE--IESENAGNYVILSNLYASAGRWDDVRTVRELMKEK 446



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 36/266 (13%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           ++  KIC+      AR++FD +     V    II G+    L  EA+ L+ ++++    +
Sbjct: 157 AKAGKICE------ARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRS 210

Query: 104 SCDNY-TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
              NY TY+SVL A +    L  G+ VH H +R        + NSL++MYS C S     
Sbjct: 211 ---NYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGS----- 262

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG- 221
                   + YS+     ++FD+M  R V++WN ++  Y K     EAV  F++M     
Sbjct: 263 --------LTYSR-----RIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG---- 277
           ++P +++F+ V    S  G       ++  +V     +  ++      + ++   G    
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGG 303
            F+F +K+     E    +W +++G 
Sbjct: 370 AFEFIKKM---PFEPTAAIWGSLLGA 392


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 221/755 (29%), Positives = 357/755 (47%), Gaps = 92/755 (12%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +S+L++C    +LR G+ +H   +    +  S F+ N L+ MYS C     A        
Sbjct: 24  ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASA-------- 75

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      ++F  M RRN V+W T+VS   +   + +A+  F  M R G+ P+ + +
Sbjct: 76  ----------LRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125

Query: 230 VNVF-----------------------------------PA------LSSL-------GD 241
              F                                   PA      L+SL       GD
Sbjct: 126 ETKFHNTLGPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGD 185

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +   +++  LV  G+   +  F+A+  I MY+       A ++F     RN   W T++
Sbjct: 186 LRRGRLLHARLVLSGAAAAST-FLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLV 244

Query: 302 GGYVQN-----------------NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            G  QN                   P                        +A ++V    
Sbjct: 245 SGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDT 304

Query: 345 ELDLGQQL-HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
           EL +   L   Y     ++    V + + ++D V+W  MI  + +NG  +  ++   +M+
Sbjct: 305 ELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMK 364

Query: 404 KQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           ++G +  D     ++LSA+  L++  + K  H  + + G   E  + + LIDMYAKS  +
Sbjct: 365 REGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDV 424

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           ++A ++  K D G  +  +  +MI GY +   +EEA V + ++    V PN  T +S++ 
Sbjct: 425 ESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIK 483

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
            C     +E G QLH   I+  L ++ FVG++L+DMY K G+I+ +  +F +I  +  + 
Sbjct: 484 GCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIA 543

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +  +I  + QHG    A+  F  M   GI P+ I FV++L+ACS+AGLVDEGL+ F  M+
Sbjct: 544 WNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMK 603

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           + + I+P  EHY C+ D  GR G++ EAY+F+ E+  + N    W SLLG+CR+ G  EL
Sbjct: 604 EAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG-WCSLLGACRMRGSKEL 662

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
            EV A+ L++++  N+  G HV LS IYA  G WE+V  VRK MR+  ++K  G SW+D 
Sbjct: 663 GEVAAQNLMKLEPGNT--GIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDS 720

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
               + F S+D  HPQ   IYE LE L   ++  G
Sbjct: 721 NKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEG 755



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 222/535 (41%), Gaps = 97/535 (18%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS----SPYTSCDNYTYSSV 113
           A +LF ++ R   V W T++ G   N +  +A+  ++ M+++    + +        ++ 
Sbjct: 225 ALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAA 284

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L A    R+     +V         +   FV ++L +MYS C   L +E           
Sbjct: 285 LGAPLRARSCTASASVG-------FDTELFVASNLADMYSKC--GLLSE----------- 324

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNV 232
                 C+VFD M +++ VAW  ++  Y K      AV  FR M R G +      F +V
Sbjct: 325 -----ACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSV 379

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A   L D   +  ++  + K G E   ++ V ++ I MYA+    + A ++    L+ 
Sbjct: 380 LSASGGLKDGWLSKSIHCCVTKAGFEL--EVAVRNALIDMYAKSMDVESASRV----LKI 433

Query: 293 NTEVWN-----TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           +   WN     +MI GY++ +   EA+ ++V+ L    +  ++ TF S +   +    L+
Sbjct: 434 DPGGWNVVSGTSMIDGYIETDCVEEALVIYVE-LRRQGVEPNEFTFSSMIKGCAMQALLE 492

Query: 348 LGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFV 387
            G QLHA +IK                      ++L + + N +  R  ++WN +I+ F 
Sbjct: 493 QGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFA 552

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           Q+G   E +     M   G   + +   +LL+A S           HA L+  G+     
Sbjct: 553 QHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS-----------HAGLVDEGL----- 596

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
             Y   M       K A  I  K +        ++ +I  Y + G L+EA+    +M   
Sbjct: 597 -KYFYSM-------KEAHGIEPKEEH-------YSCIIDTYGRAGRLDEAYKFISEM--- 638

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
            + PN     S+L AC   G+ ELG ++   ++  L   N  +  SL  +Y+  G
Sbjct: 639 PIKPNAYGWCSLLGACRMRGSKELG-EVAAQNLMKLEPGNTGIHVSLSGIYASLG 692



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD----QNVFVGTSLIDMYSKSGVINYA 567
             V +AS+L +C   G++  G+ LH    R +L      + F+   LI MYS    +  A
Sbjct: 19  TTVHLASLLQSCGRAGDLRRGRLLHA---RLVLSGAAAASTFLANHLITMYSHCADLASA 75

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
             +FA +P +N+V++TT++ G  Q+ M   AL+ F +M+  G+ P  + +
Sbjct: 76  LRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIY 125


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 204/625 (32%), Positives = 326/625 (52%), Gaps = 72/625 (11%)

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAI---FMYAELGCFDFARKIFD 287
           P+LS L + K   S  +++  ++K+G    N  +  S  I    +        +A  +F 
Sbjct: 35  PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTN--YALSKLIEFCILSPHFEGLPYAISVFK 92

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              E N  +WNTM  G+  ++ PV A++L+V ++ L  ++ +  TF   L + ++ +   
Sbjct: 93  TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFK 151

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE---------------------------------- 373
            GQQ+H +++K    L + V  ++I                                   
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211

Query: 374 -----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                            +DVVSWN MIS + + G   E L L  +M K     D  T+  
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           ++SA +   + ++G+Q H ++  HG      + + LID+Y+K G ++TA  +FE+     
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-- 329

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           +D  +WN +I GYT   L +EA + F++ML    TPN VT+ S+LPAC  +G I++G+ +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389

Query: 536 HGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           H +  + L  +     + TSLIDMY+K G I  A  VF  I  K+  ++  MI G+  HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
            ++ +  LF  M+  GI+PD ITFV +LSACS++G++D G  IF  M Q+YK+ P  EHY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509

Query: 654 CCVADMLGRVG--KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
            C+ D+LG  G  K  E    + E+  +G    IW SLL +C++HG+ EL E  A+ L++
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDG---VIWCSLLKACKMHGNVELGESFAENLIK 566

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           ++  N  PG +VLLSNIYA  G W  V K R  + ++G++K  GCS I++   V+ F   
Sbjct: 567 IEPEN--PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624

Query: 772 DQEHPQSHKIYEMLERLAMEMRNAG 796
           D+ HP++ +IY MLE + + +  AG
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAG 649



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 270/633 (42%), Gaps = 101/633 (15%)

Query: 3   SSSVPLPLPP----PPPTATPPPPQLPQIHS---------LSPPIPKLKTPTIRSRLSKI 49
           SSS P    P    PP  +    P L  +H+         +   + K+        LSK+
Sbjct: 12  SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71

Query: 50  CQ--------EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
            +        EG P+ A  +F +I  P  +IWNT+  G   ++ P  A+ LY  M     
Sbjct: 72  IEFCILSPHFEGLPY-AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
               ++YT+  VLK+CA+++  + G+ +H H ++   +   +V+ SL++MY       DA
Sbjct: 131 LP--NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188

Query: 162 EMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYV 208
             V  K    D   Y  +              K+FD +  ++VV+WN ++S Y +T  Y 
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+  F+ M++  +RP   + V V  A +  G  +    V+  +   G  + ++L + ++
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG--FGSNLKIVNA 306

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            I +Y++ G  + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP- 365

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNF----------------------VALPVI 366
           +DVT LS L A + L  +D+G+ +H YI K                        +     
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V N+++ + + SWN MI  F  +G  D    L   M+K G   D +T   LLSA S+   
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485

Query: 427 QDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
            D+G+     + +       +E Y  +ID+   SGL K A +                  
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE------------------ 527

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
                              +    + P+ V   S+L AC   GN+ELG+      I+ + 
Sbjct: 528 ------------------MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK-IE 568

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            +N      L ++Y+ +G  N  A   A + +K
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601


>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 201/575 (34%), Positives = 320/575 (55%), Gaps = 50/575 (8%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           +  + F+ +  I  YA  G    ++ +FD+   +N  +WN++I GYV+N+    AI LF 
Sbjct: 57  FSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFR 116

Query: 319 QVLELDEIVFDDVTFLSALSAVS-QLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
           Q+     ++ DD T L+ +S VS ++Q+L LG+ +H   ++      ++V N+V+     
Sbjct: 117 QMGRC--LLPDDYT-LATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIR 173

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLM-----LVYEMQKQGFMIDSV 412
                          +R+V S+N +IS     G  D  L          MQ QG+  D+ 
Sbjct: 174 CREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAF 233

Query: 413 TVTALLSAASNLRNQ-DVGKQTHAYLLRHGIHFE-----GMESYLIDMYAKSGLIKTARQ 466
           TV +LL    +   + D G++ H YL+++G+  +      M S LIDMY++S  +  +R+
Sbjct: 234 TVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRR 293

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNP 525
           +F++  S  R+   W AMI GY QNG  E A + FR+M   + + PN V++ SVLPAC  
Sbjct: 294 VFDQMKS--RNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGL 351

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTT 584
           +  +  GKQ+H FSI+   +  + +  +LIDMY+K G ++YA  VF      K+++T+++
Sbjct: 352 LVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSS 411

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           +I  YG HG  + AL+ +  M   GI+PD IT V VLSAC  +GLVDEG+ I++ +  EY
Sbjct: 412 IISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEY 471

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLEIWGSLLGSCRLHGHSE 700
           +++PS E   CV D+LGR G++ +A +F++E+    G       +WGSLL +  +HG+S 
Sbjct: 472 EMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGP-----SVWGSLLTASVIHGNSM 526

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
             ++  + LLE++  N  P  ++ LSN YA    W+ + +VR  M+ERGLRK  G SWI 
Sbjct: 527 TRDLAYRCLLELEPEN--PSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWIT 584

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           +    + F   D+ HP S  IYEML+ L   M + 
Sbjct: 585 ISDKNHFFTVADKVHPSSSSIYEMLDDLVSIMTDG 619



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 238/496 (47%), Gaps = 56/496 (11%)

Query: 113 VLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +L+   +  +L++ +  H   +  CFS  + F+   L++ Y+T   S+ +++V       
Sbjct: 32  LLQLSIDLHSLKLTQQCHSQILTNCFSQNA-FLTTRLISAYATFGDSIMSKLV------- 83

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                      FD++  +NV  WN++++ YVK  ++  A+  FR M R  + P   +   
Sbjct: 84  -----------FDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC-LLPDDYTLAT 131

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           +      + D     +++G  +++G  +V+D+ V +S + MY     F  A K+FD   +
Sbjct: 132 ISKVSGEIQDLVLGKLIHGKSLRIG--FVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQ 189

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIEL----FVQVLELDEIVFDDVTFLSALSAVSQLQ-EL 346
           RN   +N +I G     +   ++      F + ++      D  T  S L        + 
Sbjct: 190 RNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKF 249

Query: 347 DLGQQLHAYIIKNFVALPVI------------------------VLNAVIERDVVSWNTM 382
           D G++LH Y++KN + L +                         V + +  R++  W  M
Sbjct: 250 DHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAM 309

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           I+ +VQNG  +  L+L  EMQ++  +  + V++ ++L A   L     GKQ HA+ ++  
Sbjct: 310 INGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKME 369

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
            + +  + + LIDMYAK G +  AR++F+ N S  +D  TW+++I+ Y  +G  +EA   
Sbjct: 370 FNDYISLRNALIDMYAKCGSLDYARRVFD-NGSYSKDAITWSSIISAYGLHGKGQEALTT 428

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH-GFSIRYLLDQNVFVGTSLIDMYS 559
           + +ML+  + P+++T+  VL AC   G ++ G  ++   +  Y +  +V +   ++D+  
Sbjct: 429 YYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLG 488

Query: 560 KSGVINYAANVFAKIP 575
           +SG ++ A +   ++P
Sbjct: 489 RSGQLDQALDFIREMP 504



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 222/491 (45%), Gaps = 65/491 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC---DNYT 109
           G   +++ +FDS+      +WN++I G+V N+    AI+L+ QM +      C   D+YT
Sbjct: 75  GDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGR------CLLPDDYT 128

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +++ K   E ++L +GK +H   +R        V NS+++MY  C    DA        
Sbjct: 129 LATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAM------- 181

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY-----VKTERYVEAVRQFRMMLRMGIRP 224
                      KVFD M +RNV ++N I+S       +    Y +    FR M   G   
Sbjct: 182 -----------KVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNA 230

Query: 225 STISFVNVFP-ALSSLGDYKSADVVYGLLVKLGSEY--VNDLFVASSAIFMYAELGCFDF 281
              +  ++ P    S G +     ++  LVK G +    +D+ + SS I MY+       
Sbjct: 231 DAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVL 290

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           +R++FD    RN  VW  MI GYVQN  P  A+ LF ++   D I  + V+ +S L A  
Sbjct: 291 SRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACG 350

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSWN 380
            L  L  G+Q+HA+ IK      + + NA+I+                     +D ++W+
Sbjct: 351 LLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWS 410

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA--SNLRNQDVG---KQTHA 435
           ++ISA+  +G   E L   YEM +QG   D +TV  +LSA   S L ++ +      T  
Sbjct: 411 SIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTE 470

Query: 436 YLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           Y ++  +   G    ++D+  +SG +  A   F +        + W +++     +G   
Sbjct: 471 YEMKPSVEICGC---VVDLLGRSGQLDQALD-FIREMPIIPGPSVWGSLLTASVIHGNSM 526

Query: 496 EAFVAFRQMLE 506
              +A+R +LE
Sbjct: 527 TRDLAYRCLLE 537



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +++L +Q H   +     QN F+ T LI  Y+  G    +  VF  +  KN   + ++I 
Sbjct: 41  SLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLIN 100

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
           GY ++   + A+ LFR M  C + PD  T   +
Sbjct: 101 GYVKNHQFDNAIVLFRQMGRC-LLPDDYTLATI 132


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 170/433 (39%), Positives = 260/433 (60%), Gaps = 10/433 (2%)

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V + + E+DVVSWNT++    ++G   E L LV EM + G   DS T++++L   +   +
Sbjct: 129 VFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGAD 188

Query: 427 QDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              G + H +  R+G H   F G  S LIDMYA       + ++F+      RD   WN+
Sbjct: 189 VRRGMELHGFATRNGFHDDVFVG--SSLIDMYANCTRTDYSVKVFDNLPV--RDAILWNS 244

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+AG  QNG ++EA   FR+ML   + P  VT +S++PAC  + ++ LGKQLH + IR  
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D NVF+ +SLIDMY K G ++ A  +F +I   + V++T MI+G+  HG +  AL LF 
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFD 364

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+   ++P+ ITF+AVL+ACS+AGLVD+G + F+ M   Y I PS EH+  +AD LGR 
Sbjct: 365 RMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRP 424

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           GK+ EAY F+  +  +     +W +LL +C++H ++ LAE VAKK+ +++ R+   G H+
Sbjct: 425 GKLEEAYNFISGMKIKPTA-SVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSM--GSHI 481

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           +LSN Y+  G W     +RK MR++G++KE  CSWI+V    + F + D+ HP   +I +
Sbjct: 482 ILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIID 541

Query: 784 MLERLAMEMRNAG 796
            L   + +M   G
Sbjct: 542 ALNVFSEQMVRQG 554



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 228/520 (43%), Gaps = 76/520 (14%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYS--SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           + AI L+ +M+ S P  +C +   S    LK+CA      +G ++H   +R  +   RF 
Sbjct: 36  HHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFA 95

Query: 145 YNSLLNMYSTCLS--SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
            N+LLN+Y    +  S   EM G   V       + V KVFD M  ++VV+WNT+V    
Sbjct: 96  ANALLNLYCKLPAPPSHSPEMDGSAVV------LESVRKVFDEMPEKDVVSWNTLVLGCA 149

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
           ++ R+ EA+   R M R G +P + +  +V P  +   D +    ++G   + G  + +D
Sbjct: 150 ESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNG--FHDD 207

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           +FV SS I MYA     D++ K+FDN   R+  +WN+M+ G  QN    EA+ LF ++L 
Sbjct: 208 VFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLH 267

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVIVL-----NAV 371
              I    VTF S + A   L  L LG+QLHAY+I+       F++  +I +     N  
Sbjct: 268 -SGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326

Query: 372 IER---------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
           I R         D+VSW  MI     +G   E L+L   M+      + +T  A+L+A S
Sbjct: 327 IARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACS 386

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
                      HA L+  G        Y   M    G++ +        D+  R      
Sbjct: 387 -----------HAGLVDKGW------KYFNSMSDHYGIVPSLEHHAALADTLGRP----- 424

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI----ELGKQLHGF 538
                    G LEEA+     M    + P     +++L AC    N     E+ K++   
Sbjct: 425 ---------GKLEEAYNFISGM---KIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDL 472

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
             R +    +   T     YS SG  N AA++   + +K 
Sbjct: 473 EPRSMGSHIILSNT-----YSSSGRWNEAAHLRKSMRKKG 507



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 154/314 (49%), Gaps = 23/314 (7%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WNT+++G   +    EA+ L  +M +       D++T SSVL   A
Sbjct: 127 RKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDG--CKPDSFTLSSVLPIFA 184

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  ++R G  +H    R   +   FV +SL++MY+ C                DYS    
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANC-------------TRTDYS---- 227

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD +  R+ + WN++++   +     EA+  FR ML  GI+P  ++F ++ PA  +
Sbjct: 228 -VKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGN 286

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L        ++  +++ G  +  ++F++SS I MY + G    AR+IFD     +   W 
Sbjct: 287 LASLLLGKQLHAYVIRGG--FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWT 344

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI G+  +    EA+ LF + +EL  +  + +TFL+ L+A S    +D G +    +  
Sbjct: 345 AMIMGHALHGPAREALVLFDR-MELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSD 403

Query: 359 NFVALPVIVLNAVI 372
           ++  +P +  +A +
Sbjct: 404 HYGIVPSLEHHAAL 417



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 25/273 (9%)

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP----ACNPMGNIELGKQL 535
           +W   I      G    A   F +M   +      ++ + LP    +C  +G   LG  L
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSK--------------SGVINYAANVFAKIPEKNSVT 581
           H  ++R     + F   +L+++Y K              + V+     VF ++PEK+ V+
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           + T++LG  + G    AL L R M   G +PD+ T  +VL   +    V  G+++     
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           +             + DM     +   + +    L     +L  W S+L  C  +G  + 
Sbjct: 201 RN-GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAIL--WNSMLAGCAQNGSVDE 257

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
           A  + +++L    +  MP   V  S++    GN
Sbjct: 258 ALGLFRRMLHSGIK-PMP---VTFSSLIPACGN 286



 Score = 43.1 bits (100), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +AR++FD I  P  V W  +I+G   +    EA++L+ +M+  +     ++ T
Sbjct: 320 CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGN--LKPNHIT 377

Query: 110 YSSVLKACAET 120
           + +VL AC+  
Sbjct: 378 FLAVLTACSHA 388


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 205/599 (34%), Positives = 319/599 (53%), Gaps = 39/599 (6%)

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEY-------VNDL---FVASSAIF-MYAELGCF 279
           N FP +SS    K+   ++     L S +       VN L    +    IF  Y +LG  
Sbjct: 4   NPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSL 63

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             A K F++    N   WNT++  + +N    + ++LF ++L+  ++V D    + A+ A
Sbjct: 64  HVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV-DSFNLVFAVKA 122

Query: 340 VSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSW 379
              L      +  H+  IK       +VA  ++              V   V  ++ V W
Sbjct: 123 CFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIW 182

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             MI   +    +     L   M++ GF +D   V  L+ A  N+     GK  H   ++
Sbjct: 183 GVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIK 242

Query: 440 HGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
                    +++ L+DMY K G +  A ++FE  +   RD   W+A+IAG+ +NG   E+
Sbjct: 243 KNFIDSNFFLQTSLVDMYMKCGFLDFALKLFE--EISYRDVVVWSAIIAGFARNGRALES 300

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
              FRQML  +VTPN VT AS++ AC+ +G+++ G+ +HG+ IR  ++ +V   TS IDM
Sbjct: 301 ISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDM 360

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G I  A  VF +IPEKN  +++TMI G+G HG+   AL+LF  M+     P+++TF
Sbjct: 361 YAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTF 420

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           V+VLSACS++G ++EG   F  M ++Y I P  EHY C+ D+LGR GK+ EA  F+  + 
Sbjct: 421 VSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMP 480

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            E      WG+LLG+CR+H  +ELAE VAKKLL +++  S  G +V+LSNIYA+ G WE 
Sbjct: 481 TEPGA-SAWGALLGACRIHRRAELAEEVAKKLLPLESDQS--GVYVMLSNIYADVGMWEM 537

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           V K R +M E+G+ K VG + I++   +  F+S+D+   ++ +I  +   L   MR  G
Sbjct: 538 VKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELG 596



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 206/436 (47%), Gaps = 38/436 (8%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K F+ +   N+ +WNTI++ + K + + + ++ F+ ML+ G    + + V    A   L 
Sbjct: 68  KAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLS 127

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
            ++ A + + L +KL  E   D +VA + + +Y ELG  + A K+F+    +N+ +W  M
Sbjct: 128 LFQGAKLFHSLAIKLRLE--GDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVM 185

Query: 301 IGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           I G++  +      ELF ++     ELD  V + +     + A   +     G+  H   
Sbjct: 186 IKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGL-----IQACGNVYAGKEGKTFHGLC 240

Query: 357 IKN---------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           IK                      F+   + +   +  RDVV W+ +I+ F +NG   E 
Sbjct: 241 IKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALES 300

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LID 453
           + +  +M       +SVT  +++ A S+L +   G+  H Y++R+G+  + +++Y   ID
Sbjct: 301 ISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELD-VKNYTSFID 359

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G I TA ++F +    +++  +W+ MI G+  +GL  EA   F +M   N  PN 
Sbjct: 360 MYAKCGCIVTAYRVFCQIP--EKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNS 417

Query: 514 VTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           VT  SVL AC+  G IE G       S  Y +         ++D+  ++G I+ A +   
Sbjct: 418 VTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFIN 477

Query: 573 KIPEKNSVTYTTMILG 588
            +P +   +    +LG
Sbjct: 478 NMPTEPGASAWGALLG 493



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 219/518 (42%), Gaps = 65/518 (12%)

Query: 9   PLPPPPPTATPPPPQLPQI----------HSLSPPIPKLKTPTIRSRL------SKICQE 52
           P P PP ++  P   L  +          H L+  I  L     RS L          Q 
Sbjct: 3   PNPFPPISSRNPTKTLLSLFRFTKTLASNHQLNAQI--LVNALHRSLLFGPMIFGAYIQL 60

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H+A + F+ IT      WNTI+     N   Y+ + L+ +M K       D++    
Sbjct: 61  GSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV--DSFNLVF 118

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +KAC      +  K  H   I+       +V  +L+N+Y T L SL+            
Sbjct: 119 AVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVY-TELGSLEEAH--------- 168

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVF+ +  +N V W  ++  ++           F  M R G          +
Sbjct: 169 --------KVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGL 220

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDNCLE 291
             A  ++   K     +GL +K    +++ + F+ +S + MY + G  DFA K+F+    
Sbjct: 221 IQACGNVYAGKEGKTFHGLCIK--KNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISY 278

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+  VW+ +I G+ +N   +E+I +F Q+L  D +  + VTF S + A S L  L  G+ 
Sbjct: 279 RDVVVWSAIIAGFARNGRALESISMFRQMLA-DSVTPNSVTFASIVLACSSLGSLKQGRS 337

Query: 352 LHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGL 391
           +H Y+I+N V L V                     V   + E++V SW+TMI+ F  +GL
Sbjct: 338 VHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGL 397

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIH-FEGMES 449
             E L L YEM+    + +SVT  ++LSA S+    + G      + R +GI   E   +
Sbjct: 398 CAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYA 457

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++D+  ++G I  A   F  N   +   + W A++  
Sbjct: 458 CMVDLLGRAGKIDEALS-FINNMPTEPGASAWGALLGA 494



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 200/442 (45%), Gaps = 38/442 (8%)

Query: 27  IHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
            HSL+  +     P +   L  +  E G    A ++F+ +    +VIW  +I G +  + 
Sbjct: 135 FHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSE 194

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFV 144
            +    L+S+M++S      D +    +++AC      + GK  H   I+  F + + F+
Sbjct: 195 EFGVFELFSRMRRSG--FELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFL 252

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SL++MY  C                     D   K+F+ +  R+VV W+ I++ + + 
Sbjct: 253 QTSLVDMYMKC------------------GFLDFALKLFEEISYRDVVVWSAIIAGFARN 294

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
            R +E++  FR ML   + P++++F ++  A SSLG  K    V+G +++ G E   D+ 
Sbjct: 295 GRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVEL--DVK 352

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
             +S I MYA+ GC   A ++F    E+N   W+TMI G+  +    EA+ LF ++  ++
Sbjct: 353 NYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVN 412

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
           ++  + VTF+S LSA S    ++ G      + +++   PV             +  M+ 
Sbjct: 413 QLP-NSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV----------EEHYACMVD 461

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              + G  DE L  +  M  +     +    ALL A    R  ++ ++    LL      
Sbjct: 462 LLGRAGKIDEALSFINNMPTEP---GASAWGALLGACRIHRRAELAEEVAKKLLPLESDQ 518

Query: 445 EGMESYLIDMYAKSGLIKTARQ 466
            G+   L ++YA  G+ +  ++
Sbjct: 519 SGVYVMLSNIYADVGMWEMVKK 540


>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
 gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
          Length = 967

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/433 (39%), Positives = 258/433 (59%), Gaps = 10/433 (2%)

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
           V + ++ERD VSWNT+I    ++    E L +V EM + GFM D+ T++ +L   +   +
Sbjct: 443 VFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECAD 502

Query: 427 QDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              G   H Y +++G     F G  S LIDMYA    +  + ++F+     D D   WN+
Sbjct: 503 IKRGMVVHGYAIKNGFDNDVFVG--SSLIDMYANCTQMDYSMKVFDSFS--DCDAVLWNS 558

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+AGY QNG +EEA   FR+ML+  V P  VT +S++PA   +  + LGKQLH + IR  
Sbjct: 559 MLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 618

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            + N+F+ +SLIDMY K G ++ A  VF  I   + V++T MI+GY  HG +  A  LF 
Sbjct: 619 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 678

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+   ++P+ ITF+AVL+ACS+AGLVD G + F+ M  +Y   PS EH   +AD LGR 
Sbjct: 679 RMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 738

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G + EAY F+ E+  +     +W +LL +CR+H ++ LAE VAKK+ E++ ++   G HV
Sbjct: 739 GDLDEAYNFISEMKIKPTS-SVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM--GSHV 795

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           +LSN+Y+  G W    ++RK MR +G++KE  CSWI+V   ++ F + D+ HP   +I +
Sbjct: 796 ILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIID 855

Query: 784 MLERLAMEMRNAG 796
            L   + +M   G
Sbjct: 856 ALNVYSEQMIRQG 868



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 228/512 (44%), Gaps = 76/512 (14%)

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           AI L+ QM+ S    S    +  + LK+CA      +  ++H   IR  S   RF  N+L
Sbjct: 348 AISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANAL 407

Query: 149 LNMYSTCLSSLDAEMVGLKYV----------EVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
           LN+   C+     ++ G  +            ++ + Y+ + KVFD M  R+ V+WNT++
Sbjct: 408 LNL---CI-----KLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTLI 459

Query: 199 SWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
               + +R+ EA+   R M R G  P T +   V P  +   D K   VV+G  +K G  
Sbjct: 460 LGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNG-- 517

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           + ND+FV SS I MYA     D++ K+FD+  + +  +WN+M+ GY QN    EA+ +F 
Sbjct: 518 FDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFR 577

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------ 366
           ++L+   +    VTF S + A   L  L LG+QLHAY+I+       F++  +I      
Sbjct: 578 RMLQAG-VRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKC 636

Query: 367 --------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                   V N +   D+VSW  MI  +  +G   E  +L   M+      + +T  A+L
Sbjct: 637 GNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVL 696

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           +A S           HA L+ +G        Y   M  + G + +        D+  R  
Sbjct: 697 TACS-----------HAGLVDNGW------KYFNSMSNQYGFVPSLEHCAALADTLGR-- 737

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
                        G L+EA+    +M    + P     +++L AC    N  L +++   
Sbjct: 738 ------------AGDLDEAYNFISEM---KIKPTSSVWSTLLRACRVHKNTVLAEEV-AK 781

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            I  L  +++     L +MYS SG  N AA +
Sbjct: 782 KIFELEPKSMGSHVILSNMYSASGRWNEAAQL 813



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 191/409 (46%), Gaps = 36/409 (8%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     V WNT+I+G   +    EA+ +  +M +       D +T S+VL   A
Sbjct: 441 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMP--DTFTLSTVLPIFA 498

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E  +++ G  VH + I+   +   FV +SL++MY+ C              ++DYS    
Sbjct: 499 ECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANC-------------TQMDYS---- 541

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             KVFD+    + V WN++++ Y +     EA+  FR ML+ G+RP  ++F ++ PA  +
Sbjct: 542 -MKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGN 600

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L   +    ++  L++  + + +++F++SS I MY + G  D AR++F+     +   W 
Sbjct: 601 LSLLRLGKQLHAYLIR--ARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWT 658

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MI GY  +    EA  LF + +EL  +  + +TFL+ L+A S    +D G +    +  
Sbjct: 659 AMIMGYALHGPTTEAFVLF-ERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSN 717

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
            +  +P +   A +       +T+  A    G  DE    + EM+       S   + LL
Sbjct: 718 QYGFVPSLEHCAALA------DTLGRA----GDLDEAYNFISEMK---IKPTSSVWSTLL 764

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
            A    +N  + ++    +        G    L +MY+ SG    A Q+
Sbjct: 765 RACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQL 813



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   +AR++F+ I  P  V W  +I+G+  +    EA +L+ +M+  +     ++ T
Sbjct: 634 CKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGN--VKPNHIT 691

Query: 110 YSSVLKACAET 120
           + +VL AC+  
Sbjct: 692 FLAVLTACSHA 702


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 183/567 (32%), Positives = 309/567 (54%), Gaps = 25/567 (4%)

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           L+V+  +   +D+   +S I +Y++ G    ARK+FD  L+RN   W+ ++ GY+     
Sbjct: 49  LVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEV 108

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
           +E + LF  ++ LD    ++  F   LS  +    +  G+Q H Y++K+ + L   V NA
Sbjct: 109 LEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNA 168

Query: 371 VIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I                      DV S+N+++SA V++G   E   ++  M  +  + D
Sbjct: 169 LIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWD 228

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
           SVT  ++L   + +R+  +G Q HA LL+ G+ F+  + S LID Y K G +  AR+ F+
Sbjct: 229 SVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFD 288

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
                DR+   W A++  Y QNG  EE    F +M   +  PN  T A +L AC  +  +
Sbjct: 289 --GLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVAL 346

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G  LHG  +      ++ VG +LI+MYSKSG I+ + NVF+ +  ++ +T+  MI GY
Sbjct: 347 AYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGY 406

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
             HG+ ++AL +F+ M   G  P+ +TF+ VLSAC +  LV EG   FD + +++ ++P 
Sbjct: 407 SHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPG 466

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            EHY C+  +LGR G + EA  F+K   +    +  W +LL +C +H +  L + + + +
Sbjct: 467 LEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETV 526

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           ++MD  +   G + LLSN++A+   W+ V K+RK M+ER ++KE G SW+D+    + F 
Sbjct: 527 IQMDPHD--VGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFV 584

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S+   HP+S +I+E +++L   ++  G
Sbjct: 585 SEGSNHPESTQIFEKVQQLLAMIKPLG 611



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 219/446 (49%), Gaps = 48/446 (10%)

Query: 112 SVLKACAETRNLRIGKAVHCHFI---RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           ++LK  A  ++LR GK +H   +   +   +      NSL+N+YS C  S  A       
Sbjct: 28  NLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCAR------ 81

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTI 227
                       K+FD M +RNVV+W+ ++  Y+     +E +  FR ++ +    P+  
Sbjct: 82  ------------KLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEY 129

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
            F  V    +  G  K     +G L+K G   +   +V ++ I MY+     D A +I D
Sbjct: 130 IFTIVLSCCADSGRVKEGKQCHGYLLKSG--LLLHQYVKNALIHMYSRCFHVDSAMQILD 187

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
                +   +N+++   V++    EA ++  ++++ + +++D VT++S L   +Q+++L 
Sbjct: 188 TVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVD-ECVIWDSVTYVSVLGLCAQIRDLQ 246

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           LG Q+HA ++K  +   V V + +I                    +R+VV+W  +++A++
Sbjct: 247 LGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYL 306

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           QNG  +E L L  +M+ +    +  T   LL+A ++L     G   H  ++  G     +
Sbjct: 307 QNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLI 366

Query: 448 -ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + LI+MY+KSG I ++  +F  ++  +RD  TWNAMI GY+ +GL ++A + F+ M+ 
Sbjct: 367 VGNALINMYSKSGNIDSSYNVF--SNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMS 424

Query: 507 HNVTPNVVTIASVLPACNPMGNIELG 532
               PN VT   VL AC  +  ++ G
Sbjct: 425 AGECPNYVTFIGVLSACVHLALVQEG 450



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 255/558 (45%), Gaps = 78/558 (13%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK-SS 100
           I S ++   + G+   AR+LFD + +   V W+ +++G++      E + L+  +    S
Sbjct: 64  INSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDS 123

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
            Y   + Y ++ VL  CA++  ++ GK  H + ++      ++V N+L++MYS C   +D
Sbjct: 124 AYP--NEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF-HVD 180

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           + M                 ++ DT+   +V ++N+I+S  V++    EA +  + M+  
Sbjct: 181 SAM-----------------QILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDE 223

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
            +   ++++V+V    + + D +    ++  L+K G   V D+FV+S+ I  Y + G   
Sbjct: 224 CVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTG--LVFDVFVSSTLIDTYGKCGEVL 281

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            ARK FD   +RN   W  ++  Y+QN H  E + LF + +EL++   ++ TF   L+A 
Sbjct: 282 NARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTK-MELEDTRPNEFTFAVLLNAC 340

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           + L  L  G  LH  I+ +     +IV NA+I                     RDV++WN
Sbjct: 341 ASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWN 400

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            MI  +  +GL  + L++  +M   G   + VT   +LSA             H  L++ 
Sbjct: 401 AMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSAC-----------VHLALVQE 449

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           G        Y  D            QI +K D  +     +  M+A   + GLL+EA   
Sbjct: 450 GF-------YYFD------------QIMKKFDV-EPGLEHYTCMVALLGRAGLLDEAENF 489

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
            +   +  V  +VV   ++L AC+   N  LGKQ+    I+ +   +V   T L +M++K
Sbjct: 490 MKTTTQ--VKWDVVAWRTLLNACHIHRNYNLGKQITETVIQ-MDPHDVGTYTLLSNMHAK 546

Query: 561 SGVINYAANVFAKIPEKN 578
           +   +    +   + E+N
Sbjct: 547 ARKWDGVVKIRKLMKERN 564


>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 683

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/590 (32%), Positives = 311/590 (52%), Gaps = 58/590 (9%)

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  ++A K+F         ++N +I  + +  +    + LF ++ E D +  D+ T+   
Sbjct: 85  GNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLRE-DGLWPDNFTYPFV 143

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDV 376
             A+  L E+   ++L   + K  +     V N++I+                    RDV
Sbjct: 144 FKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDV 203

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           +SWN MIS +V+    ++ + +   MQ++ G M D  TV + LSA + L+  ++GK+ H 
Sbjct: 204 ISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHH 263

Query: 436 YLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGD------------------- 475
           Y+ R  + F  +  + L+DMY K G +  AR +FE+  S +                   
Sbjct: 264 YV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEE 322

Query: 476 ----------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
                     RD   W AMI GY Q    +EA   FR+M    V P+   + S+L  C  
Sbjct: 323 ARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQ 382

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
            G IE GK +H F     +  +  VGT+LI+MY+K G I  A  +F  +  K++ ++T++
Sbjct: 383 TGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSI 442

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I G   +G + +AL LF  MK  G+ PD ITF+ VLSACS+ GLV+EG + F+ M+ EY+
Sbjct: 443 ICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQ 502

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRLHGHSELAE 703
           I+P  EHY C+ D+LGR G + EA E +K++ +E   + +  +GSLL +CR++G+ E+ E
Sbjct: 503 IKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGE 562

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
            VAK+L++ ++ +S    H LL+NIYA    WE+V KVR++M++ G++K  GCS I+V  
Sbjct: 563 RVAKQLVKFESSDS--SVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDS 620

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATPRFDE 813
            ++ F S    HP+  +IY ML  +A  +  +    ++  ++     FDE
Sbjct: 621 IIHEFFSGHPSHPEMREIYYMLNIMAKPLLGSAKNEMEGEDLVGMT-FDE 669



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 247/558 (44%), Gaps = 82/558 (14%)

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
           ++P T     +  S LK+C    +L   K +H    R   +      N L+   + C   
Sbjct: 29  TNPTTGLSQQSCISYLKSCKSMTHL---KQIHAQIFRVGLHQDIVSLNKLM---AFCTDP 82

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            +     L Y E          K+F  +R   ++ +N I+  + K   Y   +  F  + 
Sbjct: 83  FNG---NLNYAE----------KMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLR 129

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
             G+ P   ++  VF A+  LG+   A+ + GL+ K G E+  D +V +S I MYA+L  
Sbjct: 130 EDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEF--DTYVRNSLIDMYAQLAL 187

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            D  + +FD   +R+   WN MI GYV+     +AI +F ++ E   ++ D+ T +S LS
Sbjct: 188 TDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLS 247

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVI---------------VLNAVIE---------- 373
           A + L+ L+LG+++H Y+  N    P+I               +  AV E          
Sbjct: 248 ACTALKRLELGKKIHHYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICW 307

Query: 374 -------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
                                    RDVV W  MI+ +VQ    DE + L  EMQ +   
Sbjct: 308 TTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVK 367

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
            D   V +LL+  +     + GK  H ++  + I  +  + + LI+MYAK G I+ A +I
Sbjct: 368 PDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEI 427

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F       +D A+W ++I G   NG   +A   F +M +  V P+ +T   VL AC+  G
Sbjct: 428 FYGLRV--KDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGG 485

Query: 528 NIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT----Y 582
            +E G++  +   + Y +   V     L+D+  ++G++N A  +  KIP++N       Y
Sbjct: 486 LVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLY 545

Query: 583 TTMILG---YGQHGMSER 597
            +++     YG   M ER
Sbjct: 546 GSLLSACRIYGNVEMGER 563



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 128/576 (22%), Positives = 233/576 (40%), Gaps = 126/576 (21%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQE---GRPHLARQLFDSITRPTTVIWNTIIIG 79
            L QIH+    +   +     ++L   C +   G  + A ++F  I  P  +I+N II  
Sbjct: 52  HLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKA 111

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           F         ++L+S++++   +   DN+TY  V KA      +   + +     +    
Sbjct: 112 FAKKGNYKRTLVLFSKLREDGLWP--DNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLE 169

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
              +V NSL++MY+                    +  D++  +FD M  R+V++WN ++S
Sbjct: 170 FDTYVRNSLIDMYA------------------QLALTDVMKMLFDEMPDRDVISWNVMIS 211

Query: 200 WYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSE 258
            YVK  R+ +A+  F RM    G+ P   + V+   A ++L   +    ++         
Sbjct: 212 GYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH--------H 263

Query: 259 YVND-----LFVASSAIFMYAELGCFDFARKIFD------------------NCLE---- 291
           YV D       + ++ + MY + GC   AR +F+                  NC E    
Sbjct: 264 YVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEA 323

Query: 292 ---------RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
                    R+  +W  MI GYVQ N   EA+ LF + +++ ++  D    +S L+  +Q
Sbjct: 324 RELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFRE-MQIRKVKPDKFIVVSLLTGCAQ 382

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
              ++ G+ +H +I +N + +  +V  A+IE                    +D  SW ++
Sbjct: 383 TGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSI 442

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I     NG   + L L  +M++ G   D +T   +LSA S                 HG 
Sbjct: 443 ICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACS-----------------HG- 484

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFV 499
                           GL++  R+ F       + +     +  ++    + GLL EA  
Sbjct: 485 ----------------GLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEE 528

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
             +++ + N    V    S+L AC   GN+E+G+++
Sbjct: 529 LIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERV 564



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 184/411 (44%), Gaps = 28/411 (6%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           + LFD +     + WN +I G+V      +AI ++ +M++ S     D  T  S L AC 
Sbjct: 192 KMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMP-DEATVVSTLSACT 250

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDA---EMVGLKYV---- 169
             + L +GK +H H++R     +  + N+LL+MY    CLS   A   EM     +    
Sbjct: 251 ALKRLELGKKIH-HYVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTT 309

Query: 170 ----EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                 +  + +   ++F+    R+VV W  +++ YV+  R+ EAV  FR M    ++P 
Sbjct: 310 MVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPD 369

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
               V++    +  G  +    ++  + +  +    D  V ++ I MYA+ G  + A +I
Sbjct: 370 KFIVVSLLTGCAQTGAIEQGKWIHEFIDE--NRIPIDAVVGTALIEMYAKCGFIEKALEI 427

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F     ++T  W ++I G   N    +A+ELF ++ +   +  DD+TF+  LSA S    
Sbjct: 428 FYGLRVKDTASWTSIICGLAMNGKTSKALELFSKMKQAG-VRPDDITFIGVLSACSHGGL 486

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           ++ G++    +   +   P           V  +  ++    + GL +E   L+ ++  +
Sbjct: 487 VEEGRKFFNSMRMEYQIKP----------KVEHYGCLVDLLGRAGLLNEAEELIKKIPDE 536

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
              I      +LLSA     N ++G++    L++       + + L ++YA
Sbjct: 537 NKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYA 587



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 10/224 (4%)

Query: 431 KQTHAYLLRHGIH-----FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           KQ HA + R G+H        + ++  D +  +G +  A ++F+           +N +I
Sbjct: 54  KQIHAQIFRVGLHQDIVSLNKLMAFCTDPF--NGNLNYAEKMFKYIRYPC--LLIYNLII 109

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
             + + G  +   V F ++ E  + P+  T   V  A   +G +   ++L G   +  L+
Sbjct: 110 KAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLE 169

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF-RS 604
            + +V  SLIDMY++  + +    +F ++P+++ +++  MI GY +    E A+++F R 
Sbjct: 170 FDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRM 229

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
            +  G+ PD  T V+ LSAC+    ++ G +I   ++   K  P
Sbjct: 230 QEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTP 273



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 5/127 (3%)

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK--SGVINYAANVFAKIP 575
           S L +C  M ++   KQ+H    R  L Q++     L+   +   +G +NYA  +F  I 
Sbjct: 42  SYLKSCKSMTHL---KQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIR 98

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
               + Y  +I  + + G  +R L LF  ++  G+ PD  T+  V  A  Y G V +  +
Sbjct: 99  YPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEK 158

Query: 636 IFDLMQQ 642
           +  L+ +
Sbjct: 159 LRGLVTK 165


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/575 (31%), Positives = 317/575 (55%), Gaps = 30/575 (5%)

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +  D ++  LV  G ++  + F+ +  +   + LG   +ARK+FD     +  +WN +I 
Sbjct: 70  RHLDQIHNRLVISGLQH--NGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIR 127

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---- 358
            Y +NN   + +E++ + +    +  D  TF   L A ++L +  L   +H  IIK    
Sbjct: 128 SYSRNNMYRDTVEMY-RWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFG 186

Query: 359 ----------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
                             + +  +V + +  R +VSW ++IS + QNG   E L +  +M
Sbjct: 187 SDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQM 246

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +  G   D + + ++L A +++ + + G+  H ++++ G+  E  +   L   YAK GL+
Sbjct: 247 RNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLV 306

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             A+  F++  +   +   WNAMI+GY +NG  EEA   F  M+  N+ P+ VT+ S + 
Sbjct: 307 TVAKSFFDQMKT--TNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVL 364

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           A   +G++EL + +  +  +     ++FV TSLIDMY+K G + +A  VF +  +K+ V 
Sbjct: 365 ASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVM 424

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           ++ MI+GYG HG    A++L+  MK  G+ P+ +TF+ +L+AC+++GLV EG ++F  M 
Sbjct: 425 WSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM- 483

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           ++++I P  EHY CV D+LGR G + EA  F+ ++  E  V  +WG+LL +C+++    L
Sbjct: 484 KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGV-SVWGALLSACKIYRCVTL 542

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
            E  A KL  +D  N+  G++V LSN+YA    W+ V  VR  MRE+GL K++G S I++
Sbjct: 543 GEYAANKLFSLDPYNT--GHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEI 600

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            G +  F   D+ HP + +I++ L+RL   ++  G
Sbjct: 601 NGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVG 635



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L +IC       AR+LFD    P   +WN II  +  NN+  + + +Y  M+ +  + 
Sbjct: 99  SNLGQIC------YARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHP 152

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D +T+  VLKAC E  +  +   +H   I+       FV N L+ +Y+ C        
Sbjct: 153 --DGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKC------GH 204

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           +G+  V            VFD +  R +V+W +I+S Y +  + VEA+R F  M   G++
Sbjct: 205 IGVAKV------------VFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P  I+ V++  A + + D +    ++G ++K+G E    L ++ +A   YA+ G    A+
Sbjct: 253 PDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTA--FYAKCGLVTVAK 310

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
             FD     N  +WN MI GY +N H  EA+ LF  ++  + I  D VT  SA+ A +Q+
Sbjct: 311 SFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRN-IKPDSVTVRSAVLASAQV 369

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
             L+L Q +  Y+ K+     + V  ++I                    ++DVV W+ MI
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMI 429

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
             +  +G   E + L + M++ G   + VT   LL+A ++
Sbjct: 430 MGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNH 469



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 24/186 (12%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVL 114
           +A+  FD +     ++WN +I G+  N    EA+ L+  M  +   P    D+ T  S +
Sbjct: 308 VAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKP----DSVTVRSAV 363

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            A A+  +L + + +  +  +       FV  SL++MY+ C S             V+++
Sbjct: 364 LASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGS-------------VEFA 410

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           +     +VFD    ++VV W+ ++  Y    +  EA+  + +M + G+ P+ ++F+ +  
Sbjct: 411 R-----RVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLT 465

Query: 235 ALSSLG 240
           A +  G
Sbjct: 466 ACNHSG 471


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 193/559 (34%), Positives = 297/559 (53%), Gaps = 39/559 (6%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL--E 322
           +A++ I  Y   G    AR +FD   ER+   W  MI GY   N+   A  +F +++  E
Sbjct: 45  LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
           LD   F   T  S L A   ++ L  G+ +H   IK+ +   + V NA+++         
Sbjct: 105 LDPNAF---TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSM 161

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       ++ VSW T+I+ +        GL +  +M  +   ++  + +  + A 
Sbjct: 162 DDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRAC 221

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTA-RQIFEKNDSGDRD 477
           +++ +   G+Q HA + +HG  FE    + + ++DMY +      A R  +E N    RD
Sbjct: 222 TSIGSHTFGEQLHAAVTKHG--FESNLPVMNSILDMYCRCSCFSEANRYFYEMNQ---RD 276

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
             TWN +IAGY ++   E  +V F  M     +PN  T  S++ AC  +  +  G+Q+HG
Sbjct: 277 LITWNTLIAGYERSNPTESLYV-FSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHG 335

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
             IR  LD N+ +  +LIDMYSK G I  +  VF  +  ++ V++T M++GYG HG  E 
Sbjct: 336 RIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEE 395

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           A+ LF  M   GI PD + F+A+LSACS+AGLVDEGL+ F LM  +Y I P  E Y CV 
Sbjct: 396 AVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVV 455

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           D+LGR GKV EAYE ++ +  + +   +WG  LG+C+ H    L ++ A ++L  D R  
Sbjct: 456 DLLGRAGKVEEAYELIESMPFKPDEC-VWGPFLGACKAHTFPNLGKLAAHRIL--DLRPH 512

Query: 718 MPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQ 777
           M G +V+LSNIYA +G W    ++RK M+  G +KE G SW++VG +V  F   D+   +
Sbjct: 513 MAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSK 572

Query: 778 SHKIYEMLERLAMEMRNAG 796
              IY++LE L   M+ +G
Sbjct: 573 IEGIYQVLENLIGHMKESG 591



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 224/494 (45%), Gaps = 58/494 (11%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
           T  P PP +P+     P +  L T  I+S   K    G    AR LFD +     V W  
Sbjct: 30  TTPPNPPFIPK----GPSV--LATTLIKSYFGK----GLIGEARTLFDEMPERDVVAWTV 79

Query: 76  IIIGFV-CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
           +I G+  CNN  +  ++    M +       + +T SSVLKAC   + L  G+ VH   I
Sbjct: 80  MIAGYTSCNNHTHAWMVFCEMMNEE---LDPNAFTISSVLKACKGMKCLSYGRLVHGLAI 136

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           +   +   +V N+L++MY+TC  S+D                   C VF  +  +N V+W
Sbjct: 137 KHGLDGFIYVDNALMDMYATCCVSMDD-----------------ACMVFRGIHLKNEVSW 179

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            T+++ Y   +     +R FR ML   +  +  SF     A +S+G +   + ++  + K
Sbjct: 180 TTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTK 239

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G E  ++L V +S + MY    CF  A + F    +R+   WNT+I GY ++N P E++
Sbjct: 240 HGFE--SNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESL 296

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
            +F  ++E +    +  TF S ++A + L  L+ GQQ+H  II+  +   + + NA+I+ 
Sbjct: 297 YVF-SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDM 355

Query: 374 -------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                              RD+VSW  M+  +  +G  +E + L  +M + G   D V  
Sbjct: 356 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 415

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKND 472
            A+LSA S+    D G +    ++         E Y  ++D+  ++G ++ A ++ E   
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 475

Query: 473 SGDRDQATWNAMIA 486
               D+  W   + 
Sbjct: 476 F-KPDECVWGPFLG 488


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 201/695 (28%), Positives = 355/695 (51%), Gaps = 89/695 (12%)

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           + WNT++   +K     E +  +  M+  G+     +F  +  A     D K    V+G 
Sbjct: 99  IIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGR 158

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
           ++K G  +  +  + ++ + +Y++ G      ++F+    R+   WNTMI  YV      
Sbjct: 159 ILKCG--FGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYR 216

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           EA++LF ++L +  ++ D++T +S +S  ++L++L++G++LH YI+ N + +   +LN +
Sbjct: 217 EALDLFDEML-VSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCL 275

Query: 372 I-----------------------------------------------------ERDVVS 378
           +                                                     ER +VS
Sbjct: 276 VDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVS 335

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           W TM+S +VQ G   E L L  +M+ +  + D V +  +LSA  +L + D+G+  HA+++
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV 395

Query: 439 RHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK--------------------------- 470
            +G+  +G + + L+D+YAK G +  A + FE+                           
Sbjct: 396 TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARD 455

Query: 471 --NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N   ++D  +WN M+  Y ++ L  E+F  F +M   NV P+  T+ S+L +C  +G 
Sbjct: 456 FFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +  G  ++ +  +  +  +  +GT+LIDMY K G +  A  +F +I EKN   +T M+  
Sbjct: 516 LNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAA 575

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y   G +  A+ L+  M+  G++PD +TF+A+L+ACS+ GLVDEG + F+ ++  Y I P
Sbjct: 576 YAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIP 635

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           +  HY C+ D+LGRVG + E  +F++ +  E +V  IW SL+ +CR H + ELAE   K+
Sbjct: 636 TIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDV-SIWSSLMRACRSHHNVELAEQAFKQ 694

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L+E+D  N+  G HVLLSNIYA+ G W++V KVR ++ E G+ K+ G + I+  G V+ F
Sbjct: 695 LIEIDPTNN--GAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEF 752

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNS 803
            + +        + + +ER  +  +   + T Q+S
Sbjct: 753 VASNLVSADILCMLQDIERRLLVKQELSDTTSQHS 787



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/547 (25%), Positives = 257/547 (46%), Gaps = 94/547 (17%)

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
           ++D  + S  +     +   D A +I     E  + +WNT++   ++   P E +E +  
Sbjct: 64  IHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYH 123

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-----------NFVAL----- 363
           ++    ++ D  TF   + A  +  ++ LG ++H  I+K           N + L     
Sbjct: 124 MVT-QGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCG 182

Query: 364 ----PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                  +   +  RDV+SWNTMIS +V  G+  E L L  EM   G + D +T+ +L+S
Sbjct: 183 KLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVS 242

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAK--------------------- 457
             + L++ ++GK+ H Y++ + +   G + + L+DMY+K                     
Sbjct: 243 TCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDV 302

Query: 458 -------SGLIKT-----ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                  SG +K+     ARQ+F+K +  +R   +W  M++GY Q G   E+   F+QM 
Sbjct: 303 VLWTTLVSGYVKSNKIDKARQLFDKMN--ERSLVSWTTMMSGYVQGGYYCESLELFQQMR 360

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK----- 560
             NV P+ V + +VL AC  + + +LG+ +H F + Y +  + F+G +L+D+Y+K     
Sbjct: 361 FENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLD 420

Query: 561 --------------------------SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
                                     SG ++ A + F KIPEK+ V++ TM+  Y +H +
Sbjct: 421 EALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDL 480

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
              +  +F  M+   ++PD  T +++LS+C+  G ++ G+ + ++  ++ +I        
Sbjct: 481 FNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWV-NVYIEKNEIGIDAMLGT 539

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            + DM G+ G V  AYE   ++ E+ NV  +W +++ +  + G +  A       LEM+ 
Sbjct: 540 ALIDMYGKCGCVEMAYEIFTQIIEK-NVF-VWTAMMAAYAMEGQALEA---IDLYLEMEE 594

Query: 715 RNSMPGY 721
           R   P +
Sbjct: 595 RGVKPDH 601



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 156/375 (41%), Gaps = 66/375 (17%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P     +  S L   C+ G    AR  F+ I     V WNT++  +V ++L  E+  ++
Sbjct: 429 LPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIF 488

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M+ S+     D  T  S+L +CA+   L  G  V+ +  +        +  +L++MY 
Sbjct: 489 CKMQSSN--VKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYG 546

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
            C             VE+ Y       ++F  +  +NV  W  +++ Y    + +EA+  
Sbjct: 547 KC-----------GCVEMAY-------EIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDL 588

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           +  M   G++P  ++F+ +  A S           +G LV  G +Y N L    + I   
Sbjct: 589 YLEMEERGVKPDHVTFIALLAACS-----------HGGLVDEGYKYFNKLRSFYNIIPTI 637

Query: 274 AELGCF-----------DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE-AIELFVQVL 321
              GC            +  + I    +E +  +W++++    +++H VE A + F Q++
Sbjct: 638 HHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRA-CRSHHNVELAEQAFKQLI 696

Query: 322 ELDEI----------VFDDVTFLSALSAV-SQLQELDLGQQ-----------LHAYIIKN 359
           E+D            ++ D      +S V ++L E  + +Q           +H ++  N
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756

Query: 360 FVALPVIVLNAVIER 374
            V+  ++ +   IER
Sbjct: 757 LVSADILCMLQDIER 771


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 200/656 (30%), Positives = 343/656 (52%), Gaps = 65/656 (9%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           + +++    +++   +A +   ++L+   +P T    N+  A   LG+   A  V+  + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           +       +LF  ++ + +Y++LG     ++IF+    R+   WN  I GY       +A
Sbjct: 68  Q------PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDA 121

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALP--- 364
           + ++  +L+   +  + +TF + L   S+ + +DLG+Q++  I+K       FV  P   
Sbjct: 122 VRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVD 181

Query: 365 ----------------------VIVLNAVI--------------------ERDVVSWNTM 382
                                 V++ N +I                    ERD +SW  M
Sbjct: 182 MYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIM 241

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           I+  +QNGL+ E L +  EM+  GF +D  T  ++L+A  +L     GKQ HAY++R   
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD- 300

Query: 443 HFEGM--ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           H + +   S L+DMY+K   IK+A  +F++     ++  +W AM+ GY QNG  EEA   
Sbjct: 301 HKDNVFVGSALVDMYSKCRSIKSAETVFKRMP--QKNVISWTAMLVGYGQNGFSEEAVKI 358

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M  + V P+  T+ SV+ +C  + ++E G Q H  ++   L   + V  +LI +Y K
Sbjct: 359 FFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGK 418

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G    +  +F ++  ++ V++T ++ GY Q G +   + LF  M   G++PD +TF+ V
Sbjct: 419 CGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGV 478

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           LSACS AGLV++GLQ F+ M +E+ I P  +H  C+ D+LGR G++ EA  F+  +    
Sbjct: 479 LSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHP 538

Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
           +V+  W +LL SCR+HG  E+ +  A  L+ ++ +N  P  +VLLS++YA +G W+ V +
Sbjct: 539 DVVG-WATLLSSCRVHGDMEIGKWAADSLIALEPQN--PASYVLLSSLYASKGKWDKVAQ 595

Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +R+ MR++ +RKE G SWI   G V+ F++ DQ  P   +IY  LE+L  +M   G
Sbjct: 596 LRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEG 651



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 124/555 (22%), Positives = 236/555 (42%), Gaps = 79/555 (14%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
           TA      L   H +   IP+    +  + LS   + G     +Q+F+ +     V WN 
Sbjct: 48  TAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNL 107

Query: 76  IIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR 135
            I G+       +A+ +Y  M K +   + +  T+S++L  C++ R + +G+ ++   ++
Sbjct: 108 AISGYANYGSCSDAVRVYKLMLKDAA-MNLNRITFSTMLILCSKFRCVDLGRQINGQILK 166

Query: 136 CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC--------------- 180
                  FV + L++MY+      DA+    +Y +    +  ++C               
Sbjct: 167 FGFGSDVFVGSPLVDMYTKLGLIYDAK----RYFDEMPERNVVMCNTMITGLMRCGMIEE 222

Query: 181 --KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
             ++F  ++ R+ ++W  +++  ++     EA+  FR M   G      +F +V  A  S
Sbjct: 223 SQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGS 282

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           L        ++  +++  +++ +++FV S+ + MY++      A  +F    ++N   W 
Sbjct: 283 LLALGEGKQIHAYVIR--TDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWT 340

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            M+ GY QN    EA+++F + ++ + +  DD T  S +S+ + L  L+ G Q H   + 
Sbjct: 341 AMLVGYGQNGFSEEAVKIFFE-MQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALV 399

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
           + +   + V NA+I                     RD VSW  +++ + Q G  +E + L
Sbjct: 400 SGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGL 459

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
              M   G   D VT   +LSA S                R G+  +G++ Y   M  + 
Sbjct: 460 FERMLAHGLKPDGVTFIGVLSACS----------------RAGLVEKGLQ-YFESMIKEH 502

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G++               D  T   +I    + G LEEA      M  H   P+VV  A+
Sbjct: 503 GIMPIV------------DHCT--CIIDLLGRAGRLEEARNFINNMPCH---PDVVGWAT 545

Query: 519 VLPACNPMGNIELGK 533
           +L +C   G++E+GK
Sbjct: 546 LLSSCRVHGDMEIGK 560


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 205/710 (28%), Positives = 362/710 (50%), Gaps = 59/710 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y   L+ C +  ++R    +H   I   ++ + F+ N ++  Y  C S   A        
Sbjct: 30  YRDALRQCQDLESVR---QIH-DRISGAASANVFLGNEIVRAYGKCGSVASAR------- 78

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                        FD + R+N  +W ++++ Y +   Y  A+  ++   RM ++P+ + +
Sbjct: 79  -----------AAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYK---RMDLQPNPVVY 124

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDN 288
             V  A +S+   +    ++  +   G++ +  D+ + +S + MYA+ G  + A+++F+ 
Sbjct: 125 TTVLGACASIKALEEGKAIHSRIS--GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFER 182

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
              R+   WN MI  Y Q+ H  EAI L+ + ++++  V    TF S LSA S L  LD 
Sbjct: 183 MSGRSVSSWNAMIAAYAQSGHFEEAIRLY-EDMDVEPSV---RTFTSVLSACSNLGLLDQ 238

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
           G+++HA I      L + + NA++                     RDVVSW+ MI+AF +
Sbjct: 239 GRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAE 298

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
             L DE +    +MQ +G   +  T  ++L A +++ +   G+  H  +L +G     + 
Sbjct: 299 TDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVN 358

Query: 449 -SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L+D+Y   G +  AR +F++ +  +RD+  W  +I GY++ G        +R+M   
Sbjct: 359 GTALVDLYTSYGSLDEARSLFDQIE--NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNT 416

Query: 508 NVTPNVVTIAS-VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
              P    I S V+ AC  +G     +Q H       +  +  + TSL++MYS+ G +  
Sbjct: 417 TKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLES 476

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF K+  ++++ +TT+I GY +HG    AL L++ M+  G EP  +TF+ VL ACS+
Sbjct: 477 ARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSH 536

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGL ++G Q+F  +Q +Y + P+  HY C+ D+L R G++ +A E +  +  E N +  W
Sbjct: 537 AGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV-TW 595

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            SLLG+ R+H   + A   A ++ ++D  +  P  +VLLSN++A  GN   +  VR  M 
Sbjct: 596 SSLLGASRIHKDVKRATHAAGQITKLDPVD--PASYVLLSNVHAVTGNLAGMASVRNTMV 653

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            RG++K  G SWI+V   ++ F   D  HP+  +I+  L+RL+ +++ AG
Sbjct: 654 ARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAG 703



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 272/569 (47%), Gaps = 62/569 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKA 116
           AR  FD+I R     W +++  +  N     A+ LY +M  + +P        Y++VL A
Sbjct: 77  ARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNP------VVYTTVLGA 130

Query: 117 CAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           CA  + L  GKA+H              + NSLL MY+ C S  DA+             
Sbjct: 131 CASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK------------- 177

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                ++F+ M  R+V +WN +++ Y ++  + EA+R +     M + PS  +F +V  A
Sbjct: 178 -----RLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYE---DMDVEPSVRTFTSVLSA 229

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S+LG       ++ L+   G+E   DL + ++ + MYA   C D A KIF     R+  
Sbjct: 230 CSNLGLLDQGRKIHALISSRGTEL--DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVV 287

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI  + + +   EAIE + + ++L+ +  +  TF S L A + + +L  G+ +H  
Sbjct: 288 SWSAMIAAFAETDLFDEAIEFYSK-MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQ 346

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
           I+ N   + ++   A+++                    RD   W  +I  + + G    G
Sbjct: 347 ILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQG-HRTG 405

Query: 396 LMLVYEMQKQGFMIDSVTV--TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
           ++ +Y   K    + +  +  + ++SA ++L      +Q H+ +   G+  +  + + L+
Sbjct: 406 VLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLV 465

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           +MY++ G +++ARQ+F+K  S  RD   W  +IAGY ++G    A   +++M      P+
Sbjct: 466 NMYSRWGNLESARQVFDKMSS--RDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPS 523

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            +T   VL AC+  G  E GKQL   SI+  Y +  N+   + +ID+ S++G ++ A  +
Sbjct: 524 ELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEEL 582

Query: 571 FAKIP-EKNSVTYTTMILGYGQHGMSERA 598
              +P E N VT+++++     H   +RA
Sbjct: 583 INAMPVEPNDVTWSSLLGASRIHKDVKRA 611



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 137/570 (24%), Positives = 245/570 (42%), Gaps = 91/570 (15%)

Query: 27  IHSLSPPIPKLKTPTI--RSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           IHS       LK   I   S L+   + G    A++LF+ ++  +   WN +I  +  + 
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSG 202

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
              EAI LY  M            T++SVL AC+    L  G+ +H       +     +
Sbjct: 203 HFEEAIRLYEDMDVEPSVR-----TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSL 257

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+LL MY+ C    DA                   K+F  + RR+VV+W+ +++ + +T
Sbjct: 258 QNALLTMYARCKCLDDA------------------AKIFQRLPRRDVVSWSAMIAAFAET 299

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
           + + EA+  +  M   G+RP+  +F +V  A +S+GD ++   V+  +  LG+ Y   L 
Sbjct: 300 DLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQI--LGNGYKITLV 357

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
             ++ + +Y   G  D AR +FD    R+  +W  +IGGY +  H    +EL+ ++    
Sbjct: 358 NGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTT 417

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYI-----IKNFVALPVI------------- 366
           ++    + +   +SA + L      +Q H+ I     I +FV    +             
Sbjct: 418 KVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESA 477

Query: 367 --VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             V + +  RD ++W T+I+ + ++G     L L  EM+ +G     +T   +L A S+ 
Sbjct: 478 RQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHA 537

Query: 425 RNQDVGKQ-----THAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIF-----EKNDS 473
             Q+ GKQ        Y +   I H+    S +ID+ +++G +  A ++      E ND 
Sbjct: 538 GLQEQGKQLFISIQSDYAMHPNIAHY----SCIIDLLSRAGRLSDAEELINAMPVEPND- 592

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE---------------HNVTPNVVTIAS 518
                 TW++++     +  ++ A  A  Q+ +               H VT N+  +AS
Sbjct: 593 -----VTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMAS 647

Query: 519 VLPACNPMGN--------IELGKQLHGFSI 540
           V       G         IE+  Q+H F++
Sbjct: 648 VRNTMVARGVKKRRGSSWIEVADQIHEFNV 677


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 220/725 (30%), Positives = 370/725 (51%), Gaps = 64/725 (8%)

Query: 106 DNYTYSSVLKACAETR--NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           D +T     ++C   R      G+ VH    +       FV NSL++MY  C    DAE 
Sbjct: 65  DRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAE- 123

Query: 164 VGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFR-MMLRM 220
                            KVF  +    RN+V+WN +++      R    +  FR  ++ +
Sbjct: 124 -----------------KVFGGIPDAARNIVSWNALMAALSGDPR--RGLELFRDCLVAV 164

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G      + V V P  ++LG  ++   V+GL  K G  +     V ++ + MYA+ G   
Sbjct: 165 GGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSG--WDAPARVGNALVDMYAKCGELA 222

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALS 338
            A + F      +   WN M+G Y +N     A  L   +Q+ E   +  D++T LS L 
Sbjct: 223 DAERAFPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLP 280

Query: 339 AVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVI--------------------ERDVV 377
           A S   EL   ++LHA+ ++  + A    V NA++                     + V 
Sbjct: 281 ACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVS 340

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWNT+ISA  Q        + +      G   D  ++ +LL A ++ ++    K TH ++
Sbjct: 341 SWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFI 400

Query: 438 LRHGIHFEG-MESYLIDMYAKSGLIK-TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           LR+G+  +  + + L+  Y +    +  AR +F+  +  ++ +  W AMI+GY+QNGL  
Sbjct: 401 LRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAME--EKGEVLWIAMISGYSQNGLPG 458

Query: 496 EAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
           E+   FR+M  +E + + +V++  S L AC+ + ++ LGK++H F+++  L  + F+ +S
Sbjct: 459 ESLQLFREMQSVEGHCS-SVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSS 517

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           LIDMYSK G +  A   F ++  +++ V++T MI GY  +G+   A+ L+  M+  G+EP
Sbjct: 518 LIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEP 577

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQ-QEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           D  T++ +L AC +AG+++EGL+ FD M+   +KI+   EHY CV  ML R G+  +A  
Sbjct: 578 DEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVA 637

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            + E+ +E +  +I  S+L +C +HG +EL   VA++LLE++   +   ++VL SN+YA 
Sbjct: 638 LMAEMPQEPDA-KILSSVLSACHIHGEAELGSDVAERLLELEPDKAE--HYVLASNMYAG 694

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
              W+++ KVRK +R+ G+ KE GCSWIDV G V  F + +  HP+  ++  M   L   
Sbjct: 695 SRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEER 754

Query: 792 MRNAG 796
           +R  G
Sbjct: 755 IREIG 759



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 42/420 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR   A ++F  I R T   WNT+I      N    AI L+ QM  +      D ++  S
Sbjct: 322 GRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTA-AAIELFIQMTNACGLKP-DGFSIGS 379

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L ACA+ ++L   KA H   +R        +  SLL+ Y  C                 
Sbjct: 380 LLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRC----------------- 422

Query: 173 YSKYDLVCKV-FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFV 230
            S+ + + +V FD M  +  V W  ++S Y +     E+++ FR M  + G   S IS  
Sbjct: 423 -SRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISAT 481

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +   A S L   +    ++   +K  ++  +D F++SS I MY++ G  + AR  FD   
Sbjct: 482 SALMACSELSSVRLGKEMHCFALK--ADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLK 539

Query: 291 ERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            R+ +V W  MI GY  N    EA+EL+ + +  + +  D+ T+L  L A      L+ G
Sbjct: 540 ARDAKVSWTAMITGYAVNGLGREAVELYGK-MRREGMEPDEFTYLGLLMACGHAGMLEEG 598

Query: 350 QQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            +    +  +         +  IE  +  ++ +I    + G   + + L+ EM ++    
Sbjct: 599 LRFFDEMRNH---------HHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQE---P 646

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSGLIKTARQI 467
           D+  ++++LSA       ++G      LL   +  +  E Y++  +MYA S      R++
Sbjct: 647 DAKILSSVLSACHIHGEAELGSDVAERLLE--LEPDKAEHYVLASNMYAGSRRWDDMRKV 704


>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
 gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 209/729 (28%), Positives = 370/729 (50%), Gaps = 57/729 (7%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R  F          WN++I+       P EAILLY  +K        D  T +  LK+C 
Sbjct: 98  RLCFHGFLNDDLAQWNSVIVDIFRAGYPEEAILLYRGLKLRQ--IGLDEKTVTFGLKSCT 155

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E RNL +GK +H   ++   N  +FV +SL+ +YS      D++                
Sbjct: 156 ELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQ---------------- 199

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVE--AVRQFRMMLRMGIRPSTISFVNVFPAL 236
             K F+ +  +++V++ ++++ Y +        A      M +  +  + ++ V++    
Sbjct: 200 --KAFEEILDKDIVSYTSMITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVA 257

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +LG  +    V+    + G   V+D  + +S + MY + G +  A     N L ++   
Sbjct: 258 GNLGAIREGKSVHCYSTRRGIG-VSDEVLGTSLVHMYMQCGAYQLASASLKN-LVQSVAS 315

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN M+ G V+      AI  F  +L   ++V D VT+ + +SA ++L        +HAY+
Sbjct: 316 WNAMLAGLVRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLISACAELCNSGYAASVHAYL 375

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           I+  + L V++  A+IE                    +D+VS+NTMI  ++QNG+ +E +
Sbjct: 376 IRRSIPLDVVLATALIEVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAI 435

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDM 454
            L+ EM  +    + VT+ +LL+A ++ ++   G+  H + +RHG  F  ++  + +I M
Sbjct: 436 ALLKEMVAECVAPNFVTILSLLAAIADHKDFVRGRWIHGFSIRHGF-FSNVDIANQIIRM 494

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNV 513
           Y+  G I +AR IF   +   ++  +W  M+ G    G   E    F+ +++ H   P+ 
Sbjct: 495 YSGCGKITSARTIFASLE--KKNLISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDS 552

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT+ + + A + +G+++  KQ+H F  R LL+++     SLI  Y+K G ++ +  +F  
Sbjct: 553 VTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLS 612

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +  ++  ++ +MI  YG HG   + L +F+ M+   I PD +TF +VLSACS+AGL+ EG
Sbjct: 613 LEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIKEG 672

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--ELGEEGNVLEIWGSLLG 691
           L IF  M   Y + P  EHY C+ D+L R G + E Y+ +K   L ++ +VL    +LL 
Sbjct: 673 LHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEEGYKLIKLSTLNDKSSVL---CALLS 729

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR +G++ L +V++ +LLE+  +N  PG + L+S ++A++G W     +R   +E G R
Sbjct: 730 ACRTYGNTMLGQVISNELLELGQQN--PGTYALISEVFAQKGQWNKSANIRNRAKENGSR 787

Query: 752 KEVGCSWID 760
           K  G S I+
Sbjct: 788 KLPGSSLIE 796



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 259/552 (46%), Gaps = 49/552 (8%)

Query: 223 RPSTISFVNVFPAL-SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           R + +S V+ F  L  +  D +S   ++  ++ LG     D+ + S  +  YA LG    
Sbjct: 39  RCNRLSDVDKFSLLFQNCTDVRSLKKLHARVLTLG--LGRDVILGSEILICYASLGVLCK 96

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
            R  F   L  +   WN++I    +  +P EAI L+ + L+L +I  D+ T    L + +
Sbjct: 97  TRLCFHGFLNDDLAQWNSVIVDIFRAGYPEEAILLY-RGLKLRQIGLDEKTVTFGLKSCT 155

Query: 342 QLQELDLGQQLHAYIIK------NFVALPVIVLNA--------------VIERDVVSWNT 381
           +L+ L LG+ +HA  +K       FV   ++ L +              ++++D+VS+ +
Sbjct: 156 ELRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTS 215

Query: 382 MISAFVQNGLDD---EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           MI+ + +N +D        +  +M +    ++ VT+ +LL  A NL     GK  H Y  
Sbjct: 216 MITGYSEN-MDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYST 274

Query: 439 RHGIHF--EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           R GI    E + + L+ MY + G  + A     KN    +  A+WNAM+AG  + G    
Sbjct: 275 RRGIGVSDEVLGTSLVHMYMQCGAYQLASASL-KNLV--QSVASWNAMLAGLVRTGQSGN 331

Query: 497 AFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
           A   F  ML EH V P+ VT A+++ AC  + N      +H + IR  +  +V + T+LI
Sbjct: 332 AIHHFSVMLHEHKVVPDSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALI 391

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
           ++Y K   I  + ++F ++  K+ V+Y TMI GY Q+GM   A++L + M    + P+ +
Sbjct: 392 EVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFV 451

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV----GKVVEAYE 671
           T +++L+A     + D    +       + I+        +A+ + R+    GK+  A  
Sbjct: 452 TILSLLAA-----IADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSART 506

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA- 730
               L E+ N++  W  ++  C   GH    E V    L M    + P    +++ I A 
Sbjct: 507 IFASL-EKKNLIS-WTVMMMGCLFCGHG--GETVELFQLLMQQHGNKPDSVTVMTAIQAV 562

Query: 731 -EEGNWENVDKV 741
            E G+ + V ++
Sbjct: 563 SELGHLKGVKQI 574



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 181/410 (44%), Gaps = 51/410 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ++ LFD +     V +NT+I G++ N +  EAI L  +M   +   + +  T  S+L A 
Sbjct: 403 SKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEM--VAECVAPNFVTILSLLAAI 460

Query: 118 AETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           A+ ++   G+ +H   IR   FSN    + N ++ MYS C     A              
Sbjct: 461 ADHKDFVRGRWIHGFSIRHGFFSNVD--IANQIIRMYSGCGKITSAR------------- 505

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFP 234
                 +F ++ ++N+++W  ++   +      E V  F+++++  G +P +++ +    
Sbjct: 506 -----TIFASLEKKNLISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQ 560

Query: 235 ALSSLGDYKSAD----VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           A+S LG  K        VY  L++  ++ +N L  A      YA+ G  D +  +F +  
Sbjct: 561 AVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITA------YAKCGRLDLSVGLFLSLE 614

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+ + WN+MI  Y  +    + +E+F +++E   I  D +TF S LSA S    +  G 
Sbjct: 615 HRDLDSWNSMISAYGMHGFYTKVLEMF-KLMEEGNINPDGLTFSSVLSACSHAGLIKEGL 673

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
            +   +   +  LP              +  ++    + G  +EG    Y++ K   + D
Sbjct: 674 HIFQSMTSIYSVLP----------QEEHYGCIVDLLSRAGHLEEG----YKLIKLSTLND 719

Query: 411 SVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             +V  ALLSA     N  +G+     LL  G    G  + + +++A+ G
Sbjct: 720 KSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPGTYALISEVFAQKG 769


>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 682

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/612 (32%), Positives = 311/612 (50%), Gaps = 60/612 (9%)

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           WN +++ Y K E + E V  ++ M+  GIRP   ++ +V  A     D  S  VV+G + 
Sbjct: 113 WNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIE 172

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
              S Y   L+V ++ I MY   G    AR++FD+  ER+   WN +I  Y       EA
Sbjct: 173 V--SSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEA 230

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
            ELF      D++ F  V                                         E
Sbjct: 231 FELF------DKMRFSGV-----------------------------------------E 243

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
             V++WN +   ++  G     L L+  M+     +D V +   L A S +    +GK+ 
Sbjct: 244 VSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 303

Query: 434 HAYLLRHGIHFEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           H   +     ++G+++    LI MY+K   ++ A  +F+K +  +    TWN++I+GY Q
Sbjct: 304 HGLAIHRS--YDGIDNVRNTLITMYSKCDDLRNAFIVFQKTE--ENSLCTWNSIISGYAQ 359

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVF 549
               EEA    R+ML     PN +T+AS+LP C  + N++ GK+ H + +R         
Sbjct: 360 VNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 419

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +  SL+D+Y+KSG I  A  V   + E + VTYT++I GYG  G    AL+LF  M   G
Sbjct: 420 LWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDEMIRSG 479

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           I+PD +T VAVLSACS++ LV EG ++F  MQ +Y I+P  +H+ C+ D+ GR G + +A
Sbjct: 480 IKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKA 539

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
            + +  +  E +    W +LL +C +HG++E+ +  A+KLLEM   N  PGY+VL++N+Y
Sbjct: 540 KDIIHRMPYEPSG-ATWATLLNACHIHGNTEIGKWAAEKLLEMKPEN--PGYYVLIANMY 596

Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           A  G+W  + +VR  MR+ G+RK+ GC+WI+     + F+  D  +PQ+   Y +L+ L 
Sbjct: 597 ATAGSWSKLAEVRTIMRDLGVRKDPGCAWINTDSGFSLFSVGDTSNPQACDTYPLLDGLN 656

Query: 790 MEMRNAGNKTIQ 801
             M++     I 
Sbjct: 657 QLMKDTAGYAIN 668



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 205/480 (42%), Gaps = 58/480 (12%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           WN +I  +  N L  E +  Y +M  K   P    D +TY SVLKAC ET ++  G+ VH
Sbjct: 113 WNVLIASYAKNELFEEVVAAYKRMVSKGIRP----DAFTYPSVLKACGETLDVASGRVVH 168

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC---------- 180
                     S +V N+L++MY    +   A  +     E D   ++ V           
Sbjct: 169 GSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWS 228

Query: 181 ---KVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
              ++FD MR      +V+ WN I   Y+ T  YV A+     M         ++ +   
Sbjct: 229 EAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGL 288

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A S +G  +    ++GL +    + +++  V ++ I MY++      A  +F    E +
Sbjct: 289 KACSLIGAIRLGKEIHGLAIHRSYDGIDN--VRNTLITMYSKCDDLRNAFIVFQKTEENS 346

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN++I GY Q N   EA  L  ++L L     + +T  S L   +++  L  G++ H
Sbjct: 347 LCTWNSIISGYAQVNKSEEASYLLREML-LAGFQPNFITLASILPLCARIANLQHGKEFH 405

Query: 354 AYII-----KNFVAL----------------PVIVLNAVIERDVVSWNTMISAFVQNGLD 392
            YI+     K++  L                   V N + E D V++ ++I  +   G  
Sbjct: 406 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEG 465

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI-----HFEG 446
              L L  EM + G   D VT+ A+LSA S+ +    G++    +  ++GI     HF  
Sbjct: 466 RVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHF-- 523

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             S ++D+Y ++G +  A+ I  +    +   ATW  ++     +G  E    A  ++LE
Sbjct: 524 --SCMVDLYGRAGFLAKAKDIIHRMPY-EPSGATWATLLNACHIHGNTEIGKWAAEKLLE 580



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 3/206 (1%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
           +  +LLSA  ++     G Q HA+ +  G+ +   +   L+  Y+   L + A+ I E +
Sbjct: 46  SAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENS 105

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
           D        WN +IA Y +N L EE   A+++M+   + P+  T  SVL AC    ++  
Sbjct: 106 DI--LHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAS 163

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+ +HG         +++V  +LI MY + G +  A  +F  + E+++V++  +I  Y  
Sbjct: 164 GRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYAS 223

Query: 592 HGMSERALSLFRSMKGCGIEPDAITF 617
            GM   A  LF  M+  G+E   IT+
Sbjct: 224 VGMWSEAFELFDKMRFSGVEVSVITW 249


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 192/626 (30%), Positives = 327/626 (52%), Gaps = 55/626 (8%)

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           Y++T     A   ++ ML   +     ++  +  A S       A  V+  ++KLG  + 
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLG--FD 245

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D++V ++ I  ++       A ++F+     ++  WN+++ GY++  +  EA  ++ Q+
Sbjct: 246 SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM 305

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
            E   I  + +  L                    + ++  V     + + ++E+D+V+W+
Sbjct: 306 PERSIIASNSMIVL--------------------FGMRGLVVEACKLFDEMLEKDMVTWS 345

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +I+ F QN + +E +     M K G M+D V   + LSA +NL   ++GK  H+  L+ 
Sbjct: 346 ALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKI 405

Query: 441 GIH-FEGMESYLIDMYAKSGLIKTARQIFEK----------------------------- 470
           G   +  +++ LI MY+K G I  AR++F++                             
Sbjct: 406 GTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIF 465

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
           +   ++D  +W++MI+GY QN L +E    F++M      P+  T+ SV+ AC  +  +E
Sbjct: 466 DSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALE 525

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK +H +  R  L  NV +GT+LIDMY K G +  A  VF  + EK   T+  +ILG  
Sbjct: 526 QGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLA 585

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            +G+ E +L +F +MK C + P+ ITF+ VL AC + GLVDEG   F  M  ++KIQP+ 
Sbjct: 586 MNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNV 645

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           +HY C+ D+LGR GK+ EA E +  +    +V   WG+LLG+C+ HG SE+   V +KL+
Sbjct: 646 KHYGCMVDLLGRAGKLQEAEELLNRMPMTPDV-ATWGALLGACKKHGDSEMGRRVGRKLI 704

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E+   +   G+HVLLSNIYA +G W++V ++R  M +  + K  GCS I+  G ++ F +
Sbjct: 705 ELQPDHD--GFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLA 762

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D+ HP    I +ML  +AM+++  G
Sbjct: 763 GDKTHPDMDAIEDMLVEMAMKLKLEG 788



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 182/688 (26%), Positives = 297/688 (43%), Gaps = 140/688 (20%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
           T    PP LP   S +  + KL  P   SR S+   +G   L R        P    W  
Sbjct: 133 TFAASPPWLP---SSASGLLKLMAP---SRKSRSVNKGFLLLMRY-------PQANTWKM 179

Query: 76  IIIG----FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
                   ++  N P+ A  LY  M   S Y   DNYTY  +++AC+  R+    K VH 
Sbjct: 180 PAKASRRAYIQTNSPHFAFTLYKSML--SNYLGADNYTYPLLIQACSIRRSEWEAKQVHN 237

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
           H ++   +   +V N+L+N +S C +  DA                  C+VF+     + 
Sbjct: 238 HVLKLGFDSDVYVRNTLINCFSVCSNMTDA------------------CRVFNESSVLDS 279

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+WN+I++ Y++     EA   +  M    I                             
Sbjct: 280 VSWNSILAGYIEIGNVEEAKHIYHQMPERSI----------------------------- 310

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
                         ++S I ++   G    A K+FD  LE++   W+ +I  + QN    
Sbjct: 311 ------------IASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYE 358

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------------- 358
           EAI  FV + ++  +V D+V  +SALSA + L  +++G+ +H+  +K             
Sbjct: 359 EAIRTFVGMHKIGVMV-DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNAL 417

Query: 359 --------------------------------------NFVALPVIVLNAVIERDVVSWN 380
                                                 N V     + +++ E+DVVSW+
Sbjct: 418 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 477

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MIS + QN L DE L L  EMQ  GF  D  T+ +++SA + L   + GK  HAY+ R+
Sbjct: 478 SMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRN 537

Query: 441 GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G+     + + LIDMY K G ++TA ++F      ++  +TWNA+I G   NGL+E +  
Sbjct: 538 GLTINVILGTTLIDMYMKCGCVETALEVFY--GMIEKGISTWNALILGLAMNGLVESSLD 595

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI--RYLLDQNVFVGTSLIDM 557
            F  M + +VTPN +T   VL AC  MG ++ G Q H +S+   + +  NV     ++D+
Sbjct: 596 MFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHHFYSMIHDHKIQPNVKHYGCMVDL 654

Query: 558 YSKSGVINYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
             ++G +  A  +  ++P    V T+  ++    +HG SE    + R +    ++PD   
Sbjct: 655 LGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL--IELQPDHDG 712

Query: 617 FVAVLSAC-SYAGLVDEGLQIFDLMQQE 643
           F  +LS   +  G  D+ L+I  +M + 
Sbjct: 713 FHVLLSNIYASKGKWDDVLEIRGMMTKH 740


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/621 (30%), Positives = 338/621 (54%), Gaps = 31/621 (4%)

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           N ++  +V+  ++ +A+    ++  + +RP   +   +  A + L        ++ L ++
Sbjct: 71  NALLRAHVRARQWCDALL---LIPCLRVRPDAFTLSLLLKACAMLPALAHGRALHALAIR 127

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
             + Y  D FVA++ + MYA+      +   ++   E +  +  +M+ GY QN    EA+
Sbjct: 128 SCTAY-TDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEAL 186

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-- 372
           E F + +     +   VT +S +SA +QL+++  GQ  HA++I+N     ++++NA++  
Sbjct: 187 EFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGF 246

Query: 373 ------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                             E+DVV+W+ M++ +VQ+G   E L    +M + G   ++VTV
Sbjct: 247 YMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTV 306

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS 473
            +++ A S   + + G++ H   ++ G   E  + + L+DMY K    + A Q+F +   
Sbjct: 307 VSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSK 366

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             +D   W  +I+G+TQNGL +E+   F+ ML     P+ VT+  VL AC+  G +    
Sbjct: 367 --KDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAF 424

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
            LHG+ +       +FV  +L+D+YSK G +  A  VF    EK+ V +++MI GYG HG
Sbjct: 425 CLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHG 484

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
           + ++A+ LF+ M    ++P+++TFV+VLSACS++GLV EG +IF+ M Q Y + P+  H+
Sbjct: 485 LGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHH 544

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
             + D+LGR G++ EA + +   G        W +LL +CR H  +E++EVVA KLL++D
Sbjct: 545 SAMVDLLGRAGELQEAAKLLHGNGRADA--HTWCALLAACRAHHDTEMSEVVAAKLLKLD 602

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
             ++  GY+ LL+NIY  + NW +  + R  +R+RGL K  GCS +++   ++ F + ++
Sbjct: 603 PDHA--GYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVMHTFTAGER 660

Query: 774 EHPQSHKIYEMLERLAMEMRN 794
            H    KI  +L   +  ++ 
Sbjct: 661 PHKDWEKISRLLREFSRTLKG 681



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 280/581 (48%), Gaps = 54/581 (9%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR LFD I  PT  + N ++   V      +A+LL   ++        D +T S +LKA
Sbjct: 54  LARHLFDEIPVPTPRLANALLRAHVRARQWCDALLLIPCLRVRP-----DAFTLSLLLKA 108

Query: 117 CAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           CA    L  G+A+H   IR C +    FV  +L++MY+ C       MVG       +S+
Sbjct: 109 CAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRG-----MVGSINAYNAFSE 163

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFP 234
            D+V +              ++V+ Y +     EA+  F R ++  G  PS ++ V+V  
Sbjct: 164 PDMVLR-------------TSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVIS 210

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L D  +    +  +++   EY  DL + ++ +  Y  +G    AR++F+   E++ 
Sbjct: 211 AAAQLKDVLNGQACHAFVIRNNFEY--DLVLVNAILGFYMRIGAVQAARRLFEGMTEKDV 268

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W+ M+ GYVQ+    EA+  + +++E   I  + VT +S + A S   +++ G+++H 
Sbjct: 269 VTWSCMVTGYVQSGDICEALTAYKKMVEAG-IKPNAVTVVSVVQACSLAPDIEEGRRVHD 327

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
             +K    L + V  A+++                    +D V+W  +IS F QNGL DE
Sbjct: 328 IAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDE 387

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
            + +   M   G   D+VT+  +L+A S           H YL+  G   +  + + L+D
Sbjct: 388 SMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVD 447

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           +Y+K G +  A ++FE   + ++D   W++MI+GY  +GL ++A   F+ M+  +V PN 
Sbjct: 448 LYSKCGNLGCAVRVFE--SAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNS 505

Query: 514 VTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           +T  SVL AC+  G ++ GK++    +  Y +  N    ++++D+  ++G +  AA +  
Sbjct: 506 LTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLH 565

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
                ++ T+  ++     H  +E  +S   + K   ++PD
Sbjct: 566 GNGRADAHTWCALLAACRAHHDTE--MSEVVAAKLLKLDPD 604



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 191/403 (47%), Gaps = 37/403 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR+LF+ +T    V W+ ++ G+V +    EA+  Y +M ++      +  T  S
Sbjct: 251 GAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAG--IKPNAVTVVS 308

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V++AC+   ++  G+ VH   ++        V  +L++MY  C                 
Sbjct: 309 VVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKC----------------- 351

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S ++   ++F  M +++ VAW  ++S + +     E++R F+ ML  G  P  ++ V V
Sbjct: 352 -SCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKV 410

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S  G  + A  ++G LV  G  + + +FVA++ + +Y++ G    A ++F++ +E+
Sbjct: 411 LAACSESGVMRQAFCLHGYLVITG--FCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEK 468

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W++MI GY  +    +A+ELF Q++    +  + +TF+S LSA S    +  G+++
Sbjct: 469 DVVLWSSMISGYGVHGLGQQAVELF-QMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRI 527

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              + + +  +P          + V  + M+    + G   E   L++   +     D+ 
Sbjct: 528 FESMTQVYGVVP----------NAVHHSAMVDLLGRAGELQEAAKLLHGNGRA----DAH 573

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           T  ALL+A     + ++ +   A LL+      G  + L ++Y
Sbjct: 574 TWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIY 616



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 15/214 (7%)

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDS 473
           LL AA++        + HA+LLR G H      + S+++  Y  +GL   AR +F++   
Sbjct: 10  LLEAAADSSTPVAAARLHAHLLRSG-HLHSSHHLTSHVLASY-PTGL---ARHLFDEIPV 64

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                A  NA++  + +     +A +    +    V P+  T++ +L AC  +  +  G+
Sbjct: 65  PTPRLA--NALLRAHVRARQWCDALLLIPCL---RVRPDAFTLSLLLKACAMLPALAHGR 119

Query: 534 QLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            LH  +IR      + FV  +L+ MY+K   +  + N +    E + V  T+M+ GY Q+
Sbjct: 120 ALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQN 179

Query: 593 GMSERALSLF-RSMKGCGIEPDAITFVAVLSACS 625
            M+  AL  F R + G G  P  +T V+V+SA +
Sbjct: 180 RMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAA 213


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 192/603 (31%), Positives = 324/603 (53%), Gaps = 31/603 (5%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           ML  G++ + I+F+NV  ++      +    ++  + +  SE+  D+FV ++ +  Y + 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRE--SEHSLDVFVNTALVNTYTKC 58

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G    ARK+FD    R+   WN+MI  Y  +    EA  +F Q ++ +    D VTFLS 
Sbjct: 59  GSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIF-QRMQHEGERCDRVTFLSI 117

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L A    + L  G+ +   I +    L + V  A+I                    ++++
Sbjct: 118 LDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNL 177

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
           ++W+ +I+AF  +G   E L     MQ++G + + VT  +LL+  +     +   + H  
Sbjct: 178 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237

Query: 437 LLRHGIH-FEGMESYLIDMYAK--SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           +  HG+     M + L+++Y +  +G +  A  I ++ D  ++    WN +I GYT +G 
Sbjct: 238 ITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD--EQQITAWNVLINGYTLHGR 295

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
             EA   ++++    +  + VT  SVL AC    ++  GK +H  ++   LD +V V  +
Sbjct: 296 SREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 355

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L +MYSK G +  A  +F  +P +++V++  M+  Y QHG SE  L L R M+  G++ +
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 415

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            ITFV+VLS+CS+AGL+ EG Q F  +  +  I+  TEHY C+ D+LGR GK+ EA +++
Sbjct: 416 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 475

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
            ++  E  ++  W SLLG+CR+H   +  ++ A+KLLE+D  NS     V+LSNIY+E G
Sbjct: 476 SKMPSEPEIV-TWASLLGACRVHKDLDRGKLAARKLLELDPGNSSAS--VVLSNIYSERG 532

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           +W+N  K+R+ M  R ++K  G S I V   V+ F  +D  HP++ +IY+ +E L   MR
Sbjct: 533 DWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMR 592

Query: 794 NAG 796
            AG
Sbjct: 593 EAG 595



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 220/482 (45%), Gaps = 66/482 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +   +   WN++I  +  +    EA  ++ +M+       CD  T+ S+L AC
Sbjct: 64  ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGE--RCDRVTFLSILDAC 121

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               NL+ GK V             FV  +L+ MY+ C S  +A                
Sbjct: 122 VNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENA---------------- 165

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  M+++N++ W+ I++ +       EA+R FRMM + GI P+ ++F+++    +
Sbjct: 166 --AQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +    +    ++ L+ + G +    +  A   ++   E G  D A  I     E+    W
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N +I GY  +    EA+E + Q L+L+ I  D VTF+S L+A +    L  G+ +H+  +
Sbjct: 284 NVLINGYTLHGRSREALETY-QRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 342

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   VIV NA+                      R  VSWN M+ A+ Q+G  +E L 
Sbjct: 343 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 402

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-------HFEGME-- 448
           L+ +M+++G  ++ +T  ++LS+ S           HA L+  G        H  G+E  
Sbjct: 403 LIRKMEQEGVKLNGITFVSVLSSCS-----------HAGLIAEGCQYFHSLGHDRGIEVK 451

Query: 449 ----SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
                 L+D+  ++G ++ A +   K  S + +  TW +++     +  L+   +A R++
Sbjct: 452 TEHYGCLVDLLGRAGKLQEAEKYISKMPS-EPEIVTWASLLGACRVHKDLDRGKLAARKL 510

Query: 505 LE 506
           LE
Sbjct: 511 LE 512



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 128/288 (44%), Gaps = 21/288 (7%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  A Q+F  + +   + W+ II  F  +    EA+  +  M++       +  T+ S+L
Sbjct: 162 PENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP--NRVTFISLL 219

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
                   L     +H        + +  + N+L+N+Y  C                +  
Sbjct: 220 NGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRC----------------ETG 263

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           + D+   +   M  + + AWN +++ Y    R  EA+  ++ +    I    ++F++V  
Sbjct: 264 ELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLN 323

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +S        +++   V+ G +  +D+ V ++   MY++ G  + AR+IFD+   R+ 
Sbjct: 324 ACTSSTSLAEGKMIHSNAVECGLD--SDVIVKNALTNMYSKCGSMENARRIFDSMPIRSA 381

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
             WN M+  Y Q+    E ++L ++ +E + +  + +TF+S LS+ S 
Sbjct: 382 VSWNGMLQAYAQHGESEEVLKL-IRKMEQEGVKLNGITFVSVLSSCSH 428



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 23/221 (10%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKI---CQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           +L +IH L        T T+ + L  +   C+ G   +A  +   +       WN +I G
Sbjct: 230 ELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLING 289

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +  +    EA+  Y +++  +     D  T+ SVL AC  + +L  GK +H + + C  +
Sbjct: 290 YTLHGRSREALETYQRLQLEA--IPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 347

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
               V N+L NMYS C S  +A                   ++FD+M  R+ V+WN ++ 
Sbjct: 348 SDVIVKNALTNMYSKCGSMENAR------------------RIFDSMPIRSAVSWNGMLQ 389

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            Y +     E ++  R M + G++ + I+FV+V  + S  G
Sbjct: 390 AYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 210/720 (29%), Positives = 371/720 (51%), Gaps = 65/720 (9%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D +T+ S+LKACA  + L  G ++H   +    +   ++ +SL+N+Y+            
Sbjct: 45  DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYA------------ 92

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
            K+  + +++     KVF+ MR R+VV W  ++  Y +     EA      M   GI+P 
Sbjct: 93  -KFGLLAHAR-----KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146

Query: 226 TISFVNVFPA------LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            ++ + +         L  L D+    V+YG        +  D+ V +S + +Y +    
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFA---VIYG--------FDCDIAVMNSMLNLYCKCDHV 195

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             A+ +FD   +R+   WNTMI GY    +  E ++L  + +  D +  D  TF ++LS 
Sbjct: 196 GDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-MRGDGLRPDQQTFGASLSV 254

Query: 340 VSQLQELDLGQQLHAYIIKNF--------VALPVI------------VLNAVIERDVVSW 379
              + +L++G+ LH  I+K           AL  +            VL  +  +DVV W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             MIS  ++ G  ++ L++  EM + G  + S  + +++++ + L + D+G   H Y+LR
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374

Query: 440 HGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
           HG   +    + LI MYAK G +  +  IFE+ +  +RD  +WNA+I+GY QN  L +A 
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN--ERDLVSWNAIISGYAQNVDLCKAL 432

Query: 499 VAFRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
           + F +M    V   +  T+ S+L AC+  G + +GK +H   IR  +     V T+L+DM
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDM 492

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           YSK G +  A   F  I  K+ V++  +I GYG HG  + AL ++      G+EP+ + F
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIF 552

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +AVLS+CS+ G+V +GL+IF  M +++ ++P+ EH  CV D+L R  ++ +A++F KE  
Sbjct: 553 LAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENF 612

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
              ++ ++ G +L +CR +G +E+ +++ + ++E+   ++  G++V L + +A    W++
Sbjct: 613 TRPSI-DVLGIILDACRANGKTEVEDIICEDMIELKPGDA--GHYVKLGHSFAAMKRWDD 669

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           V +   +MR  GL+K  G S I++ G    F      H  S     +L+ L+ EM   G+
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFGS 727



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 177/404 (43%), Gaps = 42/404 (10%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
             + S L+  C+      A+ LFD + +   V WNT+I G+       E + L  +M+  
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
                 D  T+ + L       +L +G+ +HC  ++   +    +  +L+ MY  C    
Sbjct: 240 GLRP--DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC---- 293

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
                          K +   +V +T+  ++VV W  ++S  ++  R  +A+  F  ML+
Sbjct: 294 --------------GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G   S+ +  +V  + + LG +     V+G +++ G  Y  D    +S I MYA+ G  
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG--YTLDTPALNSLITMYAKCGHL 397

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D +  IF+   ER+   WN +I GY QN    +A+ LF ++        D  T +S L A
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSW 379
            S    L +G+ +H  +I++F+    +V  A+++                    +DVVSW
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSW 517

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
             +I+ +  +G  D  L +  E    G   + V   A+LS+ S+
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSH 561



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 19/218 (8%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L TP + S ++   + G    +  +F+ +     V WN II G+  N    +A+LL+ +M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
           K  +     D++T  S+L+AC+    L +GK +HC  IR F  P   V  +L++MYS C 
Sbjct: 439 KFKT-VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKC- 496

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                      Y+E          + FD++  ++VV+W  +++ Y    +   A+  +  
Sbjct: 497 ----------GYLEAAQ-------RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            L  G+ P+ + F+ V  + S  G  +    ++  +V+
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 76/143 (53%)

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           +N+ I   + +G  ++    F  ML + + P+  T  S+L AC  +  +  G  +H   +
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
                 + ++ +SL+++Y+K G++ +A  VF ++ E++ V +T MI  Y + G+   A S
Sbjct: 74  VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133

Query: 601 LFRSMKGCGIEPDAITFVAVLSA 623
           L   M+  GI+P  +T + +LS 
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG 156


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 182/540 (33%), Positives = 305/540 (56%), Gaps = 31/540 (5%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F +    +   WN+M+  +V +N P  A++ + ++LE    V D  TF S L   
Sbjct: 30  YAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGC 89

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
           + L E  +G+ LH  ++K  +   + +   ++                     R+ V W 
Sbjct: 90  ALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWT 149

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
           +MIS +++N   +E L+L  +M++ GF  D VT+  L+SA + L++  VG + H+++   
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 441 GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +     + S L++MYAK G +KTARQ+F++    D+D   W+A+I GY +N    EA  
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDQ--LSDKDVYAWSALIFGYVKNNRSTEALQ 267

Query: 500 AFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
            FR++    N+ PN VTI +V+ AC  +G++E G+ +H +  R     +V +  SLIDM+
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMF 327

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           SK G I+ A  +F  +  K+ +++ +M+ G   HG+   AL+ F  M+   ++PD ITF+
Sbjct: 328 SKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFI 387

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK--EL 676
            VL+ACS+AGLV EG ++F  ++  Y ++  +EHY C+ D+L R G + EA EF++   L
Sbjct: 388 GVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPL 447

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
             +G    IWGS+LG+CR++ + EL E  A+ LLE++  N   G ++LLSNIYA    W 
Sbjct: 448 QPDG---AIWGSMLGACRVYNNLELGEEAARCLLELEPTND--GVYILLSNIYARRKMWN 502

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            V KVR+ M E+G++K  GCS + +    + F + D  HP+  +I  ML ++  +++  G
Sbjct: 503 EVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVG 562



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 228/481 (47%), Gaps = 59/481 (12%)

Query: 66  TRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           TR   V+ WN+++  FV +N+P  A+  Y++M + S     D +T+ S+LK CA     +
Sbjct: 38  TRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVP-DRFTFPSLLKGCALLLEFK 96

Query: 125 IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           +GK +H   ++   +   ++  +LLNMY+ C     A  +                  F+
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL------------------FE 138

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M  RN V W +++S Y+K     EA+  ++ M   G  P  ++   +  A + L D   
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDL-- 196

Query: 245 ADVVYGLLVKLGSEYVNDL------FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
                G+ +KL S ++ ++       + S+ + MYA+ G    AR++FD   +++   W+
Sbjct: 197 -----GVGMKLHS-HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWS 250

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            +I GYV+NN   EA++LF +V     +  ++VT L+ +SA +QL +L+ G+ +H YI +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310

Query: 359 NFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLML 398
                 V + N++I+                    +D++SWN+M++    +GL  E L  
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQ 370

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGMESY--LIDMY 455
            + MQ      D +T   +L+A S+      GK+  +     +G+  +  E Y  ++D+ 
Sbjct: 371 FHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKS-EHYGCMVDLL 429

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            ++GL+  AR+ F +      D A W +M+        LE    A R +LE   T + V 
Sbjct: 430 CRAGLLAEARE-FIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVY 488

Query: 516 I 516
           I
Sbjct: 489 I 489



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 200/413 (48%), Gaps = 37/413 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR LF+ +     V+W ++I G++ N+ P EA+LLY +M++     S D  T ++++ AC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDG--FSPDEVTMATLVSAC 190

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE ++L +G  +H H           + ++L+NMY+ C     A                
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTAR--------------- 235

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML-RMGIRPSTISFVNVFPAL 236
              +VFD +  ++V AW+ ++  YVK  R  EA++ FR +     +RP+ ++ + V  A 
Sbjct: 236 ---QVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISAC 292

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + LGD ++   V+  + +  ++  + + + +S I M+++ G  D A++IFD+   ++   
Sbjct: 293 AQLGDLETGRWVHDYITR--TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLIS 350

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN+M+ G   +    EA+  F  +++  ++  D++TF+  L+A S    +  G++L  Y 
Sbjct: 351 WNSMVNGLALHGLGREALAQF-HLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF-YE 408

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
           I+   AL  + L +        +  M+    + GL  E    +  M  Q    D     +
Sbjct: 409 IE---ALYGVRLKS------EHYGCMVDLLCRAGLLAEAREFIRVMPLQP---DGAIWGS 456

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           +L A     N ++G++    LL      +G+   L ++YA+  +    +++ E
Sbjct: 457 MLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRE 509


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 281/483 (58%), Gaps = 29/483 (6%)

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L   + L +L+ G+ +HA ++ +     +++ N ++                     RDV
Sbjct: 22  LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV--GKQTH 434
           V+W  +I+ + Q+    + L+L+ EM + G   +  T+ +LL AAS + + DV  G+Q H
Sbjct: 82  VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141

Query: 435 AYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
              LR+G       S  ++DMYA+   ++ A+ IF+   S  +++ +WNA+IAGY + G 
Sbjct: 142 GLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS--KNEVSWNALIAGYARKGQ 199

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            ++AF  F  ML  NV P   T +SVL AC  MG++E GK +H   I++      FVG +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           L+DMY+KSG I  A  VF ++ +++ V++ +M+ GY QHG+ + AL  F  M    I P+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            ITF+ VL+ACS+AGL+DEG   FD+M++ Y ++P   HY  + D+LGR G +  A +F+
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
            E+  +     +WG+LLG+CR+H + EL    A+ + E+D+    PG HVLL NIYA  G
Sbjct: 379 SEMPIKPTA-AVWGALLGACRMHKNMELGGYAAECIFELDSH--YPGTHVLLYNIYALAG 435

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W +  KVRK M+E G++KE  CSW+++   V+ F + D  HPQ  +I+ M E+++ +++
Sbjct: 436 RWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495

Query: 794 NAG 796
             G
Sbjct: 496 EIG 498



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 194/377 (51%), Gaps = 32/377 (8%)

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           + L       +++ LL  L S + +DL + ++ + +YA+ G   +ARK+FD    R+   
Sbjct: 26  THLNKLNEGKIIHALL--LNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVT 83

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL--GQQLHA 354
           W  +I GY Q++ P +A+ L  ++L +  +  +  T  S L A S +   D+  G+QLH 
Sbjct: 84  WTALITGYSQHDRPQDALLLLPEMLRIG-LKPNQFTLASLLKAASGVGSTDVLQGRQLHG 142

Query: 355 YIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNGLDDE 394
             ++       +V+  +              ++ + ++ ++ VSWN +I+ + + G  D+
Sbjct: 143 LCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDK 202

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG---IHFEGMESYL 451
              L   M ++       T +++L A +++ + + GK  HA +++ G   + F G  + L
Sbjct: 203 AFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG--NTL 260

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +DMYAKSG I+ A+++F++     RD  +WN+M+ GY+Q+GL + A   F +ML   + P
Sbjct: 261 LDMYAKSGSIEDAKKVFDR--LAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N +T   VL AC+  G ++ G+       +Y ++  +    +++D+  ++G ++ A    
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 572 AKIPEKNSVTYTTMILG 588
           +++P K +      +LG
Sbjct: 379 SEMPIKPTAAVWGALLG 395



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 196/412 (47%), Gaps = 39/412 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD ++    V W  +I G+  ++ P +A+LL  +M +       + +T +S+LKA 
Sbjct: 69  ARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIG--LKPNQFTLASLLKAA 126

Query: 118 AETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           +   +  +  G+ +H   +R   + + +V  ++L+MY+ C    +A+++           
Sbjct: 127 SGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLI----------- 175

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                  FD M  +N V+WN +++ Y +  +  +A   F  MLR  ++P+  ++ +V  A
Sbjct: 176 -------FDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCA 228

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +S+G  +    V+ L++K G + V   FV ++ + MYA+ G  + A+K+FD   +R+  
Sbjct: 229 CASMGSLEQGKWVHALMIKWGEKLV--AFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVV 286

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN+M+ GY Q+     A++ F ++L    I  +D+TFL  L+A S    LD G+     
Sbjct: 287 SWNSMLTGYSQHGLGKVALQRFEEMLR-TRIAPNDITFLCVLTACSHAGLLDEGRHYFDM 345

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           + K  V           E  +  + TM+    + G  D  +  + EM  +     +    
Sbjct: 346 MKKYNV-----------EPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKP---TAAVWG 391

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           ALL A    +N ++G      +     H+ G    L ++YA +G    A ++
Sbjct: 392 ALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKV 443



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 218/491 (44%), Gaps = 87/491 (17%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           ++LK C     L  GK +H   +         + N+LLN+Y+ C      ++V       
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKC-----GDLV------- 67

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
            Y++     K+FD M  R+VV W  +++ Y + +R  +A+     MLR+G++P+  +  +
Sbjct: 68  -YAR-----KLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLAS 121

Query: 232 VFPALSSLG--DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +  A S +G  D      ++GL ++ G  Y ++++V+ + + MYA     + A+ IFD  
Sbjct: 122 LLKAASGVGSTDVLQGRQLHGLCLRYG--YDSNVYVSCAILDMYARCHHLEEAQLIFDVM 179

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           + +N   WN +I GY +     +A  LF  +L  + +     T+ S L A + +  L+ G
Sbjct: 180 VSKNEVSWNALIAGYARKGQGDKAFCLFSNMLR-ENVKPTHFTYSSVLCACASMGSLEQG 238

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           + +HA +IK    L   V N +++                    RDVVSWN+M++ + Q+
Sbjct: 239 KWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQH 298

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGME 448
           GL    L    EM +     + +T   +L+A S           HA LL  G H F+ M+
Sbjct: 299 GLGKVALQRFEEMLRTRIAPNDITFLCVLTACS-----------HAGLLDEGRHYFDMMK 347

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            Y ++            QI           + +  M+    + G L+ A     +M    
Sbjct: 348 KYNVE-----------PQI-----------SHYVTMVDLLGRAGHLDRAIQFISEM---P 382

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTS--LIDMYSKSGVIN 565
           + P      ++L AC    N+ELG    G++   + +  + + GT   L ++Y+ +G  N
Sbjct: 383 IKPTAAVWGALLGACRMHKNMELG----GYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 566 YAANVFAKIPE 576
            AA V   + E
Sbjct: 439 DAAKVRKMMKE 449



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 10/241 (4%)

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
            RQ  ++N     +   ++L  C  +  +  GK +H   +      ++ +  +L+++Y+K
Sbjct: 4   IRQQCKNNAGAREIC-HTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAK 62

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G + YA  +F ++  ++ VT+T +I GY QH   + AL L   M   G++P+  T  ++
Sbjct: 63  CGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASL 122

Query: 621 LSACSYAGLVD--EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
           L A S  G  D  +G Q+  L  + Y    +    C + DM  R   + EA      +  
Sbjct: 123 LKAASGVGSTDVLQGRQLHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVS 181

Query: 679 EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA----EEGN 734
           +  V   W +L+      G  + A  +   +L  + + +   Y  +L    +    E+G 
Sbjct: 182 KNEV--SWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGK 239

Query: 735 W 735
           W
Sbjct: 240 W 240


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 209/631 (33%), Positives = 338/631 (53%), Gaps = 41/631 (6%)

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           V  WN+ ++  V      +A+  FR M + G+ P+ ++F +V  A S L + K + +V+ 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            +VK  S +  DLFV +S + MY +     FA  +F    +R+   WN+MI G+ Q    
Sbjct: 79  HVVK--SRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFV 136

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
              + LF + + ++ I  D VT +    +   L++L + + +H++ IK  +   V V N 
Sbjct: 137 DRVVSLFCE-MGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNT 195

Query: 371 VIE----------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
            I                       +  VSWN+MI+ +       + +    +M   GF 
Sbjct: 196 WIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFR 255

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES------YLIDMYAKSGLIK 462
            D  T+ +LLS+         GK  HA    HGI   G +S       LI MY+K G I 
Sbjct: 256 ADLSTILSLLSSCVQPEVLFHGKLIHA----HGIQV-GCDSDIQVINTLISMYSKCGDIG 310

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
           +AR +F+ N  G + + +W AMIAGY + G L+EA   F  M      P++VTI S++  
Sbjct: 311 SARYLFD-NMLG-KTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSG 368

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C   G +ELGK +  ++    L  N+ V  +LID+Y+K G ++ A  +F  +PEK+ V++
Sbjct: 369 CGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSW 428

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           TT+I G   +G  + AL LF  M   G++P+ ITF+AVL AC++AG +++G + F+LM +
Sbjct: 429 TTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK 488

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
            YKI P  +HY C+AD+LGR G++ EA+EF++ +  + +V  IW  LL +C++H +  + 
Sbjct: 489 VYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDV-GIWSVLLSACKIHQNVVIG 547

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E VA  L E++ + ++P  +V ++NIYA  G W+ V  +R  M+     K  G S + V 
Sbjct: 548 ECVAYHLFELEPQTAVP--YVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVN 605

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           G  + F  +D+ HP+   IYE LE LA++M+
Sbjct: 606 GKTHEFTVEDRCHPEGLLIYETLENLALQMK 636



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 257/556 (46%), Gaps = 52/556 (9%)

Query: 58  ARQLFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           A Q F+  +   TV  WN+ I   V     ++A+LL+ QMK++      +N T+ SV KA
Sbjct: 6   ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNG--LEPNNLTFPSVAKA 63

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C++  NL+  + VH H ++       FV  S+++MY  C        +G  Y        
Sbjct: 64  CSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKC------SQLGFAY-------- 109

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +F  M +R+V +WN+++  + +       V  F  M   GIR  +++ + +  + 
Sbjct: 110 ----NLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSA 165

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            SL D K  + ++   +K+G +   D+ V+++ I  YA+ G F  A  +FD  +++  + 
Sbjct: 166 LSLKDLKMLESIHSFGIKIGID--TDVSVSNTWIAAYAKCGEFGLAETVFDG-IDKGLKT 222

Query: 297 ---WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN+MI GY       +A+  F ++L       D  T LS LS+  Q + L  G+ +H
Sbjct: 223 GVSWNSMIAGYAHFEQCSKAVGFFKKML-CGGFRADLSTILSLLSSCVQPEVLFHGKLIH 281

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
           A+ I+      + V+N +I                     +  VSW  MI+ + + G  D
Sbjct: 282 AHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLD 341

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLI 452
           E + L   M+  G   D VT+ +L+S        ++GK    Y   +G+    M  + LI
Sbjct: 342 EAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALI 401

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           D+YAK G +  AR++F      ++   +W  +IAG   NG  +EA   F QM+E  + PN
Sbjct: 402 DVYAKCGSMDNARELFYTMP--EKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPN 459

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            +T  +VL ACN  G +E G +      + Y ++  +   + + D+  + G +  A    
Sbjct: 460 HITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFI 519

Query: 572 AKIPEKNSVTYTTMIL 587
             +P K  V   +++L
Sbjct: 520 QNMPFKPDVGIWSVLL 535


>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
 gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 180/521 (34%), Positives = 289/521 (55%), Gaps = 55/521 (10%)

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           D +TF   L A ++LQ    G  +  ++ K   +  V V+NA +                
Sbjct: 120 DHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLF 179

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRN 426
                RDVVSWNT+I  +V++GL  E L L + + + G  +  D VT+   +S  + + +
Sbjct: 180 DESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGD 239

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG----------- 474
            ++GK+ H ++   G+     + + ++DMY K G ++ A+ +FE+ D+            
Sbjct: 240 LELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVG 299

Query: 475 ------------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
                             +RD   WNA++AGY QN   +EA   F +M E  V PN +T+
Sbjct: 300 HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITM 359

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC+ +G +E+G  +H +  R+ L  +V +GTSL+DMY+K G I  A  +F +IP+
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPD 419

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN++T+T MI G   HG ++ A+  F+ M   G++PD ITF+ VLSAC +AGLV EG Q 
Sbjct: 420 KNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQF 479

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F LM ++Y ++   +HY C+ D+LGR G + EA + V  +  + + + +WG+L  +CR+H
Sbjct: 480 FSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAV-VWGALFFACRMH 538

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+  L E  A KL+E+D  +S  G +VLL+N+YAE    +  DKVR  MR  G+ K  GC
Sbjct: 539 GNITLGEKAAMKLVELDPSDS--GIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGC 596

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           S I++ G V+ F  KD+ H  +  IY+ L  + ++M++  N
Sbjct: 597 SCIELNGVVHEFIVKDKSHLDTIAIYDCLHGITLQMKHTAN 637



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 196/428 (45%), Gaps = 37/428 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LAR+LFD       V WNT+I G+V + LP EA+ L+ ++ +       D  T    +  
Sbjct: 174 LARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSG 233

Query: 117 CAETRNLRIGKAVH----CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE---------- 162
           CA+  +L +GK +H       +RC       + N++++MY  C S   A+          
Sbjct: 234 CAQMGDLELGKRLHEFVDSKGVRCTVR----LMNAVMDMYVKCGSLELAKSVFERIDNKT 289

Query: 163 MVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           +V    + V +++  ++     +FD M  R+V  WN +++ YV+ ++  EA+  F  M  
Sbjct: 290 VVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQE 349

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             + P+ I+ VN+  A S LG  +    V+  + +   +    + + +S + MYA+ G  
Sbjct: 350 SKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR--HQLYLSVALGTSLVDMYAKCGNI 407

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             A  IF    ++N   W  MI G   + H  EAIE F ++++L  +  D++TF+  LSA
Sbjct: 408 KKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLG-LQPDEITFIGVLSA 466

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                 +  G+Q  + + + +           +ER +  ++ MI    + G  DE   LV
Sbjct: 467 CCHAGLVKEGRQFFSLMHEKY----------HLERKMKHYSCMIDLLGRAGHLDEAEQLV 516

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             M       D+V   AL  A     N  +G++    L+       G+   L +MYA++ 
Sbjct: 517 NTMPMDP---DAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEAN 573

Query: 460 LIKTARQI 467
           + K A ++
Sbjct: 574 MRKKADKV 581



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 197/460 (42%), Gaps = 82/460 (17%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           Y A+L  S  +        D+ T+  +LKACA  +    G AV  H  +   +   FV N
Sbjct: 108 YRALLCSSSARP-------DHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVN 160

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           + ++ +     S+   MV             L  ++FD    R+VV+WNT++  YV++  
Sbjct: 161 AGVHFW-----SVSGSMV-------------LARRLFDESPARDVVSWNTLIGGYVRSGL 202

Query: 207 YVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDY-------------------KSA 245
             EA+  F  ++  G  +RP  ++ +      + +GD                    +  
Sbjct: 203 PREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLM 262

Query: 246 DVVYGLLVKLGS--------EYVNDLFVAS--SAIFMYAELGCFDFARKIFDNCLERNTE 295
           + V  + VK GS        E +++  V S  + I  +A LG  + AR +FD   ER+  
Sbjct: 263 NAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN ++ GYVQN    EAI LF ++ E  ++  +++T ++ LSA SQL  L++G  +H Y
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQE-SKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381

Query: 356 IIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           I ++ + L V                     +   + +++ ++W  MI     +G  DE 
Sbjct: 382 IDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEA 441

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--LI 452
           +     M   G   D +T   +LSA  +      G+Q  + L+    H E  M+ Y  +I
Sbjct: 442 IEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFS-LMHEKYHLERKMKHYSCMI 500

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           D+  ++G +  A Q+       D D   W A+      +G
Sbjct: 501 DLLGRAGHLDEAEQLVNTMPM-DPDAVVWGALFFACRMHG 539



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 19/254 (7%)

Query: 501 FRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           +R +L   +  P+ +T   +L AC  +     G  + G   +     +VFV  + +  +S
Sbjct: 108 YRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWS 167

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM--KGCGIEPDAITF 617
            SG +  A  +F + P ++ V++ T+I GY + G+   AL LF  +   G  + PD +T 
Sbjct: 168 VSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTM 227

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +  +S C+  G ++ G ++ + +  +  ++ +      V DM  + G +    E  K + 
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDSK-GVRCTVRLMNAVMDMYVKCGSL----ELAKSVF 282

Query: 678 E--EGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL--EMDTRNSMPGYHVLLSNIYAEEG 733
           E  +   +  W +++      GH+ L  +   ++L  EM  R+  P ++ L++  Y +  
Sbjct: 283 ERIDNKTVVSWTTMIV-----GHARLGMMEDARMLFDEMPERDVFP-WNALMAG-YVQNK 335

Query: 734 NWENVDKVRKEMRE 747
             +    +  EM+E
Sbjct: 336 QGKEAIALFHEMQE 349



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 91/231 (39%), Gaps = 51/231 (22%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIII-------------------------------GFV 81
           G   LA+ +F+ I   T V W T+I+                               G+V
Sbjct: 273 GSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYV 332

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            N    EAI L+ +M++S      +  T  ++L AC++   L +G  VH +  R     S
Sbjct: 333 QNKQGKEAIALFHEMQESK--VDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLS 390

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             +  SL++MY+ C +   A                 +C +F  +  +N + W  ++   
Sbjct: 391 VALGTSLVDMYAKCGNIKKA-----------------IC-IFKEIPDKNALTWTAMICGL 432

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
                  EA+  F+ M+ +G++P  I+F+ V  A    G  K     + L+
Sbjct: 433 ANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLM 483


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 204/610 (33%), Positives = 326/610 (53%), Gaps = 70/610 (11%)

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFD---FARKIF 286
           P+LS L + K   S  +++  ++K G    N    A S +  ++ L   FD   +A  +F
Sbjct: 4   PSLSLLHNCKTLQSLRIIHAKMIKTGLHNTN---YALSKLIEFSVLSPHFDGLTYAISVF 60

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D+  E N  +WNTM  G+  ++ PV A+ L+V ++ L  +V +  TF   L A ++ +  
Sbjct: 61  DSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LVPNSYTFPFLLKACAKSKAF 119

Query: 347 DLGQQLHAYIIK-----------NFVAL--------------------PVIVLNAVIE-- 373
             GQQ+H +++K           + +A+                     V+   A+I+  
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             +DVVSWN +IS + + G   E L L  EM K     D  T+ 
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMV 239

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
            +LSA +   + ++G+Q H+++  HG      + + LID+Y K G ++TA  +FE     
Sbjct: 240 TVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSY- 298

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            +D  +WN +I GYT   L +EA + F++ML    +PN VT+ S+LPAC  +G I++G+ 
Sbjct: 299 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357

Query: 535 LHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +H +  + L  +     + TSLIDMY+K G I  A  VF  +  ++  ++  MI G+  H
Sbjct: 358 IHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH 417

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G +  A  +F  M+  GIEPD ITFV +LSACS++G++D G  IF  M ++YKI P  EH
Sbjct: 418 GRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEH 477

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+LG  G   EA E +  +  + + + IW SLL +C++HG+ EL E  A+ L+++
Sbjct: 478 YGCMIDLLGHSGLFKEAEEMINSMEMDPDGV-IWCSLLKACKMHGNVELGESFAQNLIKI 536

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           + +NS  G +VLLSNIYA  G W  V K R  + ++G++K  GCS I++   V+ F   D
Sbjct: 537 EPKNS--GSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 773 QEHPQSHKIY 782
           + HP++ +IY
Sbjct: 595 KLHPRNREIY 604



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 221/483 (45%), Gaps = 48/483 (9%)

Query: 55  PHL-----ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           PH      A  +FDSI  P  +IWNT+  G   ++ P  A+ LY  M   S     ++YT
Sbjct: 48  PHFDGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM--ISLGLVPNSYT 105

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +LKACA+++  R G+ +H H ++   +   +V+ SL+ MY       DA  V  +  
Sbjct: 106 FPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSS 165

Query: 170 EVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
             D   Y  +              K+FD +  ++VV+WN ++S Y +T  Y EA+  F+ 
Sbjct: 166 HRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKE 225

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M++  ++P   + V V  A +     +    V+  +   G  + ++L + ++ I +Y + 
Sbjct: 226 MMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG--FGSNLKIVNALIDLYIKC 283

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   ++VT LS 
Sbjct: 284 GEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NEVTMLSI 342

Query: 337 LSAVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIER 374
           L A + L  +D+G+ +H YI K                        +     V ++++ R
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNR 402

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            + SWN MI  F  +G  +    +   M+K G   D +T   LLSA S+    D+G+   
Sbjct: 403 SLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIF 462

Query: 435 AYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
             +         +E Y  +ID+   SGL K A ++    +  D D   W +++     +G
Sbjct: 463 RSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEM-DPDGVIWCSLLKACKMHG 521

Query: 493 LLE 495
            +E
Sbjct: 522 NVE 524



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 189/440 (42%), Gaps = 65/440 (14%)

Query: 51  QEGRPHLAR-------------------------------QLFDSITRPTTVIWNTIIIG 79
           + GR   AR                               ++FD I     V WN +I G
Sbjct: 150 KNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISG 209

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +       EA+ L+ +M K++     D  T  +VL ACA++ ++ +G+ VH         
Sbjct: 210 YAETGNYKEALELFKEMMKTN--VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFG 267

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            +  + N+L+++Y  C                   + +    +F+ +  ++V++WNT++ 
Sbjct: 268 SNLKIVNALIDLYIKC------------------GEVETASGLFEGLSYKDVISWNTLIG 309

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            Y     Y EA+  F+ MLR G  P+ ++ +++ PA + LG       ++  + K     
Sbjct: 310 GYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 369

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            N   + +S I MYA+ G  + A+++FD+ L R+   WN MI G+  +     A ++F +
Sbjct: 370 SNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSR 429

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSW 379
           + + D I  DD+TF+  LSA S    LDLG+ +   + +++   P           +  +
Sbjct: 430 MRK-DGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITP----------KLEHY 478

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             MI     +GL  E   ++  M+      D V   +LL A     N ++G+     L++
Sbjct: 479 GCMIDLLGHSGLFKEAEEMINSMEMDP---DGVIWCSLLKACKMHGNVELGESFAQNLIK 535

Query: 440 HGIHFEGMESYLIDMYAKSG 459
                 G    L ++YA +G
Sbjct: 536 IEPKNSGSYVLLSNIYATAG 555


>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 607

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 197/608 (32%), Positives = 329/608 (54%), Gaps = 35/608 (5%)

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF--VASSAIFMYA 274
           M+   + P   ++  V  + SS  +      ++G LVKLG     DLF  VA++   MY 
Sbjct: 1   MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGF----DLFDVVATALAEMYE 56

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           E   F+ A ++FD    ++    +++     QN++      +F +++  +++V D  TF 
Sbjct: 57  ECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIA-EQLVPDSFTFF 115

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
           + L  ++ L  + L + +H   I + ++  ++V  AV+                    E+
Sbjct: 116 NLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEK 175

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D V WN MI+A+ + G   E L L   M + G   D  T   ++S+ + L+  D GKQTH
Sbjct: 176 DRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTH 235

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           A++LR+G   +  + + LIDMY +  ++ +A +IF  N   D+   +W+AMI GY +NG 
Sbjct: 236 AHILRNGSDSQVSVHNSLIDMYCECKILDSACKIF--NWMTDKSVISWSAMIKGYVKNGQ 293

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
              A   F +M    +  + V + ++LPA   +G +E  K LHG+S++  L     + T+
Sbjct: 294 SLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTA 353

Query: 554 LIDMYSKSGVINYAANVFA--KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
           L+  Y+K G I  A  +F   KI +K+ + + +MI  +  HG   +   L+  MK    +
Sbjct: 354 LLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSK 413

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           PD +TF+ +L+AC  +GLV++G + F  M + Y  QPS EHY C+ ++LGR G + EA E
Sbjct: 414 PDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGE 473

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAE 731
            VK +  + +   +WG LL +C++H  S+LAE  A+KL+ M+ RN+  G ++LLSNIYA 
Sbjct: 474 LVKNMPIKPDA-RVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNA--GNYILLSNIYAA 530

Query: 732 EGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAME 791
            G W+ V K+R  +R +GL+K  GCSW+++ G+V  F   DQ HP++  IY +L  L +E
Sbjct: 531 AGKWDGVAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELE 590

Query: 792 MRNAGNKT 799
           ++    K+
Sbjct: 591 IKEVREKS 598



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 243/540 (45%), Gaps = 75/540 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D  TY  VL++C+   N+  G+ +H + ++   +    V  +L  MY  C+   +A    
Sbjct: 9   DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH--- 65

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          ++FD    +++   +++ +   + +      R F  M+   + P 
Sbjct: 66  ---------------QLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPD 110

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           + +F N+   ++ L   + A +V+   + + S+   DL V ++ + +Y++L     ARK+
Sbjct: 111 SFTFFNLLRFIAGLNSIQLAKIVH--CIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKL 168

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD   E++  VWN MI  Y +   P E +ELF + +    I  D  T L  +S+++QL+ 
Sbjct: 169 FDKMPEKDRVVWNIMIAAYAREGKPTECLELF-KSMARSGIRSDLFTALPVISSIAQLKC 227

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
           +D G+Q HA+I++N     V V N++I                    ++ V+SW+ MI  
Sbjct: 228 VDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKG 287

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HF 444
           +V+NG     L L  +M+  G   D V +  +L A  ++   +  K  H Y ++ G+   
Sbjct: 288 YVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSL 347

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L+  YAK G I+ A+++FE+    D+D   WN+MI+ +  +G   + F  + +M
Sbjct: 348 PSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRM 407

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
              N  P+ VT   +L AC   G +E GK+                       + K    
Sbjct: 408 KCSNSKPDQVTFLGLLTACVNSGLVEKGKE-----------------------FFKEMTE 444

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           +Y         + +   Y  M+   G+ G+   A  L ++M    I+PDA  +  +LSAC
Sbjct: 445 SYGC-------QPSQEHYACMVNLLGRAGLISEAGELVKNMP---IKPDARVWGPLLSAC 494



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 25/309 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V+WN +I  +     P E + L+  M +S   +  D +T   V+ + 
Sbjct: 165 ARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRS--DLFTALPVISSI 222

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ + +  GK  H H +R  S+    V+NSL++MY  C                     D
Sbjct: 223 AQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCEC------------------KILD 264

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             CK+F+ M  ++V++W+ ++  YVK  + + A+  F  M   GI+   +  +N+ PA  
Sbjct: 265 SACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFV 324

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF--DNCLERNTE 295
            +G  ++   ++G  +KLG   +  L  A   +  YA+ G  + A+++F  +   +++  
Sbjct: 325 HIGALENVKYLHGYSMKLGLTSLPSLNTA--LLITYAKCGSIEMAQRLFEEEKIDDKDLI 382

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
           +WN+MI  +  +    +  +L+ + ++      D VTFL  L+A      ++ G++    
Sbjct: 383 MWNSMISAHANHGDWSQCFKLYNR-MKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKE 441

Query: 356 IIKNFVALP 364
           + +++   P
Sbjct: 442 MTESYGCQP 450


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 202/610 (33%), Positives = 320/610 (52%), Gaps = 70/610 (11%)

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFD---FARKIF 286
           P+LS L + K   S  +++  ++K G    N    A S +  +  L   FD   +A  +F
Sbjct: 4   PSLSLLHNCKTLQSLRIIHAQMIKTGLHNTN---YALSRLLEFCILSPNFDGLPYAISVF 60

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +   E N  +WNTM  G+  ++ PV AI+L+V ++ L  ++ +  TF   L + ++L+  
Sbjct: 61  ETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLG-LLPNSYTFPFLLKSCAKLKVS 119

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------------- 373
             GQQ+H +++K    L + V  ++I                                  
Sbjct: 120 KEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGY 179

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             +DVVSWN +IS +   G + E L L  EM K     D  T+ 
Sbjct: 180 ASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMV 239

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
            ++SA +   +  +G+Q H+++  HG+     + + LID+Y+K G ++TA  +F+     
Sbjct: 240 TVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQ--GLS 297

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           ++D  +WN MI GYT   L +EA + F++ML     PN VT+ S+LPAC  +G I+ G+ 
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357

Query: 535 LHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +H +  + +  +     + TSLIDMY+K G I  A  VF  +  +       MI G+  H
Sbjct: 358 IHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMH 417

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G +  A  +F  M+  GIEPD ITFV +LSACS++G++D G +IF  M Q YKI P  EH
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH 477

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+LG +G   EA E +  +  E + + IW SLL +C++HG+ EL E  A+KL+++
Sbjct: 478 YGCMIDLLGHLGLFKEAEEMINTMTMEPDGV-IWCSLLKACKMHGNVELGESFAQKLIKI 536

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           +  N  PG +VLLSNIYA  G W  V  +R  + ++G++K  GCS I++   V+ F   D
Sbjct: 537 EPEN--PGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 773 QEHPQSHKIY 782
           + HP++ +IY
Sbjct: 595 KFHPRNREIY 604



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 283/629 (44%), Gaps = 114/629 (18%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           N+   S+L  C   ++LRI   +H   I+   + + +  + LL     C+  L     GL
Sbjct: 2   NHPSLSLLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEF---CI--LSPNFDGL 53

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
            Y             VF+T++  N++ WNT+   +  +   V A++ +  M+ +G+ P++
Sbjct: 54  PYA----------ISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNS 103

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  +  + + L   K    ++G ++KLG E   DL+V +S I MY + G +  A K+F
Sbjct: 104 YTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYEL--DLYVHTSLISMYVKNGRWKDAHKVF 161

Query: 287 DNCLERNT------------------------EV-------WNTMIGGYVQNNHPVEAIE 315
           D    R+                         E+       WN +I GY    +  EA++
Sbjct: 162 DGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALD 221

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-- 373
           LF ++++ + +  D+ T ++ +SA +Q   + LG+Q+H++I  + +   + ++NA+I+  
Sbjct: 222 LFKEMMKTN-VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLY 280

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             +DV+SWNTMI  +    L  E L+L  EM + G   + VT+ 
Sbjct: 281 SKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTML 340

Query: 416 ALLSAASNLRNQDVGKQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           ++L A + L   D G+  H Y+   ++   +   + + LIDMYAK G I+ A Q+F  N 
Sbjct: 341 SILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVF--NS 398

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
              R  +  NAMI G+  +G    AF  F +M ++ + P+ +T   +L AC+  G ++LG
Sbjct: 399 MHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +++                        +S   NY      KI  K    Y  MI   G  
Sbjct: 459 RRIF-----------------------RSMTQNY------KITPKLE-HYGCMIDLLGHL 488

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE- 651
           G+ + A  +  +M    +EPD + + ++L AC   G V+ G       Q+  KI+P    
Sbjct: 489 GLFKEAEEMINTMT---MEPDGVIWCSLLKACKMHGNVELGES---FAQKLIKIEPENPG 542

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            Y  ++++    G+  E       L ++G
Sbjct: 543 SYVLLSNIYATAGRWNEVANIRALLNDKG 571



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 250/576 (43%), Gaps = 85/576 (14%)

Query: 44  SRLSKICQ-----EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           SRL + C      +G P+ A  +F++I  P  +IWNT+  G   ++ P  AI LY  M  
Sbjct: 38  SRLLEFCILSPNFDGLPY-AISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMIS 96

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
                  ++YT+  +LK+CA+ +  + G+ +H H ++       +V+ SL++MY      
Sbjct: 97  LGLLP--NSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRW 154

Query: 159 LDAEMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTE 205
            DA  V       D   Y  +              K+FD +  ++VV+WN I+S Y  T 
Sbjct: 155 KDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTG 214

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
              EA+  F+ M++  ++P   + V V  A +  G  +    V+  +   G    ++L +
Sbjct: 215 NNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG--LGSNLKI 272

Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            ++ I +Y++ G  + A  +F     ++   WNTMIGGY   N   EA+ LF ++L   E
Sbjct: 273 VNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGE 332

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI------------------- 366
              +DVT LS L A +QL  +D G+ +H YI K    +                      
Sbjct: 333 NP-NDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEA 391

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
              V N++  R + + N MI  F  +G  +    +   M+K G   D +T   LLSA S+
Sbjct: 392 AHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 451

Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
               D+G++    + ++      +E Y  +ID+    GL K A ++              
Sbjct: 452 SGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMI------------- 498

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N M                        + P+ V   S+L AC   GN+ELG+      I+
Sbjct: 499 NTM-----------------------TMEPDGVIWCSLLKACKMHGNVELGESFAQKLIK 535

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
            +  +N      L ++Y+ +G  N  AN+ A + +K
Sbjct: 536 -IEPENPGSYVLLSNIYATAGRWNEVANIRALLNDK 570


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 190/566 (33%), Positives = 318/566 (56%), Gaps = 37/566 (6%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  ++K G++  +D+F+++  + MYA+ G   FAR++FD   E+N   W+ MI GY Q 
Sbjct: 25  LHAAVLKTGTQ--SDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQA 82

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFV 361
             P  AI+L+ Q+     +V ++  F S +SA + L  + LGQ++H+  +K      +FV
Sbjct: 83  GEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 362 ALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +  +I              V     E + VS+N +I+ FV+N   + GL     M++QG 
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTA 464
           + D      +L   +   N   G + H   ++  +    F G  + +I MY++  LI+ A
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG--NVIITMYSELNLIQEA 256

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPAC 523
            + F   +  ++D  +WN +IA  +      +    F+ M E  NV P+  T  S L AC
Sbjct: 257 EKAFRLIE--EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAAC 314

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             + ++  GKQ+H   +R  L Q++ VG +L++MY+K G I YA ++F+K+   N V++ 
Sbjct: 315 AGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWN 374

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           T+I G+G HG+ ERA+ LF  M   GI PD++TF+ +L+AC++AGLVD+G   F+ M++ 
Sbjct: 375 TIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEET 434

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y I P  EH+ C+ DMLGR G++ EA E++++     + + +  SLL + RLHG   + E
Sbjct: 435 YGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPV-VLVSLLSASRLHGDVVIGE 493

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
            +AK LL++    + P  +VLLSN+YA +G W++V + RK ++  GL+KE G S I+V G
Sbjct: 494 RLAKWLLKLQPVTTSP--YVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNG 551

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLA 789
            V +F   D  H +  +I  +L+ L+
Sbjct: 552 SVEKFTIGDFTHLRIKEIKGILKTLS 577



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 231/491 (47%), Gaps = 51/491 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T SS+L  C++T+ LR G ++H   ++  +    F+ N +LNMY+ C  +  A       
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFAR------ 58

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       +VFD M  +N+V+W+ ++S Y +      A+  +  M    + P+   
Sbjct: 59  ------------QVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYV 103

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A +SL        ++   +K G E ++  FV++S I MY +      A  +F N
Sbjct: 104 FASVISACASLSAVTLGQKIHSRSLKFGYESIS--FVSNSLISMYMKCNQCSDALSVFTN 161

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             E N   +N +I G+V+N      +E F +++    ++ D   F+  L   +  + L  
Sbjct: 162 TPEPNCVSYNALITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKR 220

Query: 349 GQQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQ 388
           G +LH   +K N  + P I                       + E+DV+SWNT+I+A   
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSH 280

Query: 389 NGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
                +GL +   M ++     D  T T+ L+A + L +   GKQ HA+L+R  ++ + G
Sbjct: 281 CDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG 340

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L++MYAK G I  A  IF K      +  +WN +IAG+  +GL E A   F QM  
Sbjct: 341 VGNALVNMYAKCGCIGYAYDIFSK--MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNA 398

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVI 564
             + P+ VT   +L ACN  G ++ G QL+  S+   Y +  ++   + LIDM  ++G +
Sbjct: 399 SGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRL 457

Query: 565 NYAANVFAKIP 575
           N A     K P
Sbjct: 458 NEAEEYMRKFP 468



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 201/451 (44%), Gaps = 69/451 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    ARQ+FD +     V W+ +I G+     P  AI LYSQM     +   + Y ++S
Sbjct: 52  GHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQM-----FLVPNEYVFAS 106

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+ ACA    + +G+ +H   ++       FV NSL++MY  C    DA           
Sbjct: 107 VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDA----------- 155

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VF      N V++N +++ +V+ ++    +  F++M + G+ P   +F+ V
Sbjct: 156 -------LSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               ++  + K    ++   VKL  +  +  F+ +  I MY+EL     A K F    E+
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLD--STPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT+I      +   + + +F  + E   +  DD TF SAL+A + L  +  G+Q+
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326

Query: 353 HAYIIKNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLD 392
           HA++++  +   + V NA+                    +  ++VSWNT+I+ F  +GL 
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGME--- 448
           +  + L  +M   G   DSVT   LL+A +           HA L+  G ++F  ME   
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACN-----------HAGLVDKGQLYFNSMEETY 435

Query: 449 ---------SYLIDMYAKSGLIKTARQIFEK 470
                    S LIDM  ++G +  A +   K
Sbjct: 436 GIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T++S+L  C+    +  G  LH   ++     +VF+   +++MY+K G   +A  VF ++
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            EKN V+++ MI GY Q G  + A+ L+  M    + P+   F +V+SAC+    V  G 
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 635 QI 636
           +I
Sbjct: 122 KI 123


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 207/682 (30%), Positives = 354/682 (51%), Gaps = 60/682 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y S+L   A T+++   KA+HCH I      S  + ++L   Y+ C              
Sbjct: 18  YQSLLNHYAATQSISKTKALHCHVITG-GRVSGHILSTLSVTYALC-------------G 63

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR--PSTI 227
            + Y++     K+FD M + +++++N ++  YV+   Y +A+  F  M+  GI+  P   
Sbjct: 64  HIAYAR-----KLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++  V  A   L       V++G +++  S +  D +V ++ + MY   G  + AR +FD
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILR--SWFGMDKYVQNALLAMYMNFGRVEMARNVFD 176

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   WNTMI GY +N +  +A+ +F  ++  + +  D  T +S L     L+ L+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-EGVDPDHATIVSMLPVCGHLKGLE 235

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           +G+ +H  + +  +   + V NA++                     RDV++W  MI+ ++
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYI 295

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           ++G  +  L L   MQ +G   ++VT+ +L+SA  +    + GK  H + +R  +  + +
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDII 355

Query: 448 -ESYLIDMYAKSGLIKTARQIFE---KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            E+ LI MYAK   I    ++F    +N +G      W+A+IAG  QN L+ +A   F++
Sbjct: 356 IETSLISMYAKCKHIDLCFRVFSGASRNHTG-----PWSAIIAGCVQNELVRDALDLFKR 410

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M   +V PN+ T+ S+LPA   + ++     +H +  +     ++   T L+ +YSK G 
Sbjct: 411 MRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGT 470

Query: 564 INYAANVFAKIPEKNS----VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           +  A  +F  I EK+     V +  +I GYG HG    AL +F  M   G+ P+ ITF +
Sbjct: 471 LESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTS 530

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L+ACS++GLV+EGL +F  M + YK    + HY C+ D+LGR G++ EAY  +  +  E
Sbjct: 531 ALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE 590

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
                IWG+LL +C  H + +L E+ A KL E++  N+  G +VLL+NIYA  G W++++
Sbjct: 591 PTS-TIWGALLAACVTHENVQLGEMAANKLFELEPENT--GNYVLLANIYAALGRWKDME 647

Query: 740 KVRKEMRERGLRKEVGCSWIDV 761
           KVR  M   GLRK+ G S I++
Sbjct: 648 KVRNMMENVGLRKKPGHSTIEI 669



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/645 (24%), Positives = 297/645 (46%), Gaps = 97/645 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR+LFD + + + + +N +I  +V + L ++AI ++ +M         D YTY  
Sbjct: 63  GHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPF 122

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V KA  E +++ +G  +H   +R +    ++V N+LL MY                  ++
Sbjct: 123 VAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMY------------------MN 164

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + + ++   VFD M+ R+V++WNT++S Y +     +A+  F  M+  G+ P   + V++
Sbjct: 165 FGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSM 224

Query: 233 FPALSSLGDYKSADVVYGLL--VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            P    L   +    V+ L+   +LG    + + V ++ + MY + G  D AR +F    
Sbjct: 225 LPVCGHLKGLEMGRNVHKLVEEKRLG----DKIEVKNALVNMYLKCGRMDEARFVFGRME 280

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            R+   W  MI GY+++     A+EL  ++++ + +  + VT  S +SA     +L+ G+
Sbjct: 281 RRDVITWTCMINGYIEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSACGDALKLNDGK 339

Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
            LH + I+  V   +I+  ++I                          W+ +I+  VQN 
Sbjct: 340 CLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNE 399

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
           L  + L L   M+++    +  T+ +LL A + L +       H YL + G        +
Sbjct: 400 LVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAAT 459

Query: 450 YLIDMYAKSGLIKTARQIF----EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            L+ +Y+K G +++A +IF    EK+ S  +D   W A+I+GY  +G    A   F +M+
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKS--KDVVLWGALISGYGMHGDGHNALQVFMEMV 517

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY---LLDQNVFVGTSLIDMYSKSG 562
              VTPN +T  S L AC+  G +E G  L  F + +   L   N +  T ++D+  ++G
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHY--TCIVDLLGRAG 575

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A N+   IP                                   EP +  + A+L+
Sbjct: 576 RLDEAYNLITTIP----------------------------------FEPTSTIWGALLA 601

Query: 623 ACSYAGLVDEGLQIFDLMQQE-YKIQP-STEHYCCVADMLGRVGK 665
           AC    +  E +Q+ ++   + ++++P +T +Y  +A++   +G+
Sbjct: 602 AC----VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 226/698 (32%), Positives = 358/698 (51%), Gaps = 61/698 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A Q+F S+ R +   WN II  F  N    +AI ++  M   S     D+ T SSVL AC
Sbjct: 40  AIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSM--DSAGIKPDSATLSSVLGAC 97

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +  R+L  GK +H   +    + S  V N+L++MY+ C                  S+ D
Sbjct: 98  SSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARC------------------SRLD 139

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   VFD +  ++VV+WN +++      R  EA +  ++  RM + P+ ++F +VF A S
Sbjct: 140 VARVVFDKIESKSVVSWNAMIA---ACARQGEAEQALQLFKRMELEPNEVTFASVFNACS 196

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L D++         ++ GS    ++ VA++ + MY + G    AR++F+    +N   W
Sbjct: 197 LLPDHREVGKRIHDRIR-GSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSW 255

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+G Y QNN   EA+E++ +++   ++  D+VT + AL   + L+ L LG +LH   +
Sbjct: 256 NAMLGAYTQNNLDREALEVYHEMVA-QKVQRDEVTVVIALGISASLRLLKLGIELHELSV 314

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
            +     + V NA+I                      DVVSW  +I A+ Q+G + E L 
Sbjct: 315 AHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALE 374

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL--RHGIHFEGMESYLIDMY 455
           L  +M+ +G   D VT T++LSA SN  + ++G+  HA LL  + G     + + LI+MY
Sbjct: 375 LYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMY 434

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G +  + +IF+      +    WNAMI  Y Q G    A   +  M +  + P+  T
Sbjct: 435 VKCGRLDLSSEIFQSCKD-TKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDEST 493

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           ++S+L AC  + ++E G+QLH   I      QN  V  +LI MY+  G I  A  VF ++
Sbjct: 494 LSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 553

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
             ++ V++T +I  Y Q G + RAL L+R M   G++P   TF+ V  AC +AGLVDE  
Sbjct: 554 KNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECK 613

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL----GEEGNVLEIWGSLL 690
             F  M ++ +I P+ +HY CV  +L R GK+ EA + +  +    G  G     W SLL
Sbjct: 614 WYFQSMIED-RITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVG-----WTSLL 667

Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           G+CR HG  + A   A + +E+D ++S P  +VLLSN+
Sbjct: 668 GACRTHGDLKRARRAADEAMELDRQDSAP--YVLLSNV 703



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 262/538 (48%), Gaps = 56/538 (10%)

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+ +H H +        F+ + LL MY  C S  DA                   +VF +
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDA------------------IQVFHS 46

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           + RR++ +WN I++ + K     +A+  FR M   GI+P + +  +V  A SSL D +  
Sbjct: 47  LPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEG 106

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++   +  G    + + V ++ + MYA     D AR +FD    ++   WN MI    
Sbjct: 107 KKIHSRALARG--LSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACA 164

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIKNFVALP 364
           +     +A++LF ++    E+  ++VTF S  +A S L +  ++G+++H  I  + +   
Sbjct: 165 RQGEAEQALQLFKRM----ELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEAN 220

Query: 365 VIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           V V  A++                     ++VVSWN M+ A+ QN LD E L + +EM  
Sbjct: 221 VTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVA 280

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           Q    D VTV   L  +++LR   +G + H   + HG      +++ LI MY K   +  
Sbjct: 281 QKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDA 340

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR++F K  +   D  +W A+I  YTQ+G   EA   ++QM    + P+ VT  SVL AC
Sbjct: 341 ARRVFSKVRA--HDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSAC 398

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVF----VGTSLIDMYSKSGVINYAANVFAKIPE-KN 578
           +   ++ELG+ LH    R L  ++ F    +  +LI+MY K G ++ ++ +F    + K 
Sbjct: 399 SNTSDLELGQALHA---RLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKA 455

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            V +  MI  Y Q G S  A+ L+  MK  G++PD  T  ++LSAC+    +++G Q+
Sbjct: 456 VVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQL 513



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 255/571 (44%), Gaps = 54/571 (9%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R  +AR +FD I   + V WN +I          +A+ L+ +M+        +  T++SV
Sbjct: 137 RLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELEP-----NEVTFASV 191

Query: 114 LKACAETRNLR-IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
             AC+   + R +GK +H          +  V  +++ MY                    
Sbjct: 192 FNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGK------------------ 233

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           + K  +  +VF+ ++ +NVV+WN ++  Y +     EA+  +  M+   ++   ++ V  
Sbjct: 234 FGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIA 293

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               +SL   K    ++ L V  G  Y +++ V ++ I MY +    D AR++F      
Sbjct: 294 LGISASLRLLKLGIELHELSVAHG--YDSNIKVQNALISMYGKCNELDAARRVFSKVRAH 351

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   W  +I  Y Q+    EA+EL+ Q +E + +  D VTF S LSA S   +L+LGQ L
Sbjct: 352 DVVSWTALIVAYTQHGRNREALELYKQ-MEGEGMEPDKVTFTSVLSACSNTSDLELGQAL 410

Query: 353 HAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNG 390
           HA ++         VL A +                       + VV WN MI+A+ Q G
Sbjct: 411 HARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEG 470

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL--RHGIHFEGME 448
                + L   M+++G   D  T++++LSA + L++ + G+Q H  ++  R       + 
Sbjct: 471 YSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVL 530

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI MYA  G I+ A+ +F++    +RD  +W  +I+ Y Q G    A   +R+ML   
Sbjct: 531 NALISMYASCGEIREAKAVFKRMK--NRDVVSWTILISAYVQGGDARRALRLYRRMLVEG 588

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V P   T   V  AC   G ++  K      I   +       + ++ + S++G +  A 
Sbjct: 589 VQPTEPTFLCVFLACGHAGLVDECKWYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAE 648

Query: 569 NVFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
           ++   +P    SV +T+++     HG  +RA
Sbjct: 649 DLLHSMPFNPGSVGWTSLLGACRTHGDLKRA 679



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 173/361 (47%), Gaps = 46/361 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+  +ARQ+F+ I     V WN ++  +  NNL  EA+ +Y +M   +     D  T   
Sbjct: 235 GKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEM--VAQKVQRDEVTVVI 292

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L   A  R L++G  +H   +    + +  V N+L++MY  C                 
Sbjct: 293 ALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKC----------------- 335

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            ++ D   +VF  +R  +VV+W  ++  Y +  R  EA+  ++ M   G+ P  ++F +V
Sbjct: 336 -NELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSV 394

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE- 291
             A S+  D +    ++  L+     + + + VA + I MY + G  D + +IF +C + 
Sbjct: 395 LSACSNTSDLELGQALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDLSSEIFQSCKDT 453

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           +   VWN MI  Y Q  +   A++L+  +++   +  D+ T  S LSA ++LQ+L+ G+Q
Sbjct: 454 KAVVVWNAMITAYEQEGYSRAAVDLY-DMMKQRGLDPDESTLSSILSACAELQDLEKGEQ 512

Query: 352 LHAYII--KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           LH  II  ++    PV VLNA+I                     RDVVSW  +ISA+VQ 
Sbjct: 513 LHVEIIASRDCSQNPV-VLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQG 571

Query: 390 G 390
           G
Sbjct: 572 G 572



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+++H   +   L  + F+G  L+ MY K G ++ A  VF  +P ++  ++  +I  + +
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           +    +A+ +FRSM   GI+PD+ T  +VL ACS    ++EG +I         +  S  
Sbjct: 65  NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALAR-GLSSSII 123

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
               +  M  R  ++  A     ++  E   +  W +++ +C   G +E A  + K++
Sbjct: 124 VQNALVSMYARCSRLDVARVVFDKI--ESKSVVSWNAMIAACARQGEAEQALQLFKRM 179


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 205/651 (31%), Positives = 337/651 (51%), Gaps = 32/651 (4%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
           +F+ M  R+ ++W  +++ YV      EA+  F  M +  G++      V+V     +LG
Sbjct: 106 MFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQF-VVSVALKACALG 164

Query: 241 -DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
            +    ++++G  VK G   +N +FV+S+ + MY ++G  +    +F+N   RN   W  
Sbjct: 165 MNVYFGELLHGFSVKSG--LINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTA 222

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK- 358
           +I G V     ++ +  F ++    ++ +D  TF  AL A ++   L  G+ +HA  IK 
Sbjct: 223 VIVGLVHAGCSLDGLSYFSEMWR-SKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQ 281

Query: 359 --NFVALPVIVLNAVIER-----------------DVVSWNTMISAFVQNGLDDEGLMLV 399
             N  A  V  L  +  +                 DVVSW  +I  +VQ G ++  L   
Sbjct: 282 GFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAF 341

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKS 458
             M+K     +  T  +++SA +NL     G+Q H + LR G +    + + +I +Y+K 
Sbjct: 342 KRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKC 401

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL++ A  +F+      +D  +W+ +I+ Y Q    +EAF     M      PN   +AS
Sbjct: 402 GLLQEASLVFDGMTR--KDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALAS 459

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL  C  M  +E GKQ+H +++   LD    V ++LI MYS+SG +  A+ +F  I   +
Sbjct: 460 VLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNND 519

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V++T MI GY +HG S+ A+SLF ++   G+ PD +TF+ +L+AC++AGLVD G   + 
Sbjct: 520 IVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYK 579

Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
           LM  EY+I PS EHY C+ D+L R G++ EA   V+ +    + + +W +LL +CR HG 
Sbjct: 580 LMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDV-VWSTLLRACRDHGD 638

Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
            + A   A+++L +   ++  G H+ L+NIY+  G  E    VRK M+ +G+ KE G SW
Sbjct: 639 LDRAIWAAEQMLRLHPNSA--GAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSW 696

Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATP 809
           I+    +N F +  Q HP S +I  +LE L   + +A          DATP
Sbjct: 697 INSNDQLNTFVAGVQSHPLSKQITTILELLRTSIGDARLDFGSIVEDDATP 747



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 172/711 (24%), Positives = 319/711 (44%), Gaps = 74/711 (10%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           P + S+L ++ + G+   AR +F+ ++    + W  +I G+V      EA++L+S M   
Sbjct: 85  PELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVD 144

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
           S     D +  S  LKACA   N+  G+ +H   ++     S FV ++L++MY       
Sbjct: 145 SGLQK-DQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMY------- 196

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
                      +   K +  C VF+ M  RNVV+W  ++   V     ++ +  F  M R
Sbjct: 197 -----------MKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWR 245

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             +   + +F     A +  G       ++   +K G  +    +V ++   MY++    
Sbjct: 246 SKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQG--FNETAYVVNTLGTMYSKCRKP 303

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           D+  ++F      +   W  +I  YVQ      A++ F ++ + D +  ++ TF S +SA
Sbjct: 304 DYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSD-VSPNEYTFASVISA 362

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSW 379
            + L     G+Q+H + ++  +   + V N++I                     +D++SW
Sbjct: 363 CANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISW 422

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           +T+IS + Q     E    +  M ++G   +   + ++LS   ++   + GKQ HAY L 
Sbjct: 423 STIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALC 482

Query: 440 HGIHFEGM-ESYLIDMYAKSGLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEE 496
            G+  E M  S LI MY++SG ++ A +IF+  KN+    D  +W AMI GY ++G  +E
Sbjct: 483 IGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNN----DIVSWTAMINGYAEHGYSQE 538

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS--- 553
           A   F  +    + P+ VT   +L ACN  G ++L     GF    L+     +  S   
Sbjct: 539 AISLFENISSVGLMPDYVTFIGILTACNHAGLVDL-----GFYYYKLMTNEYQIAPSKEH 593

Query: 554 ---LIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
              +ID+  ++G ++ A ++   +P   + V ++T++     HG  +RA+     M    
Sbjct: 594 YGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQM--LR 651

Query: 610 IEPDA----ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
           + P++    IT   + SA   +G  +E   +  LM+ +  I+     +    D L     
Sbjct: 652 LHPNSAGAHITLANIYSA---SGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVA 708

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
            V+++   K++     +LE+  + +G  RL   S + E  A  +L +  RN
Sbjct: 709 GVQSHPLSKQI---TTILELLRTSIGDARLDFGS-IVEDDATPVLLVHVRN 755



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 213/472 (45%), Gaps = 40/472 (8%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           YV ++   +S +    +LG    AR +F+    R+   W  +I GYV   +  EA+ LF 
Sbjct: 80  YVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFS 139

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----- 373
            +     +  D      AL A +    +  G+ LH + +K+ +   V V +A+++     
Sbjct: 140 NMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKV 199

Query: 374 ---------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          R+VVSW  +I   V  G   +GL    EM +     DS T    L
Sbjct: 200 GKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVAL 259

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID----MYAKSGLIKTARQIFEKNDSG 474
            A++       GK  HA  ++ G +     +Y+++    MY+K        ++F K  + 
Sbjct: 260 KASAESGLLHYGKAIHAQTIKQGFN---ETAYVVNTLGTMYSKCRKPDYVMRLFGKMST- 315

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
             D  +W  +I  Y Q G  E A  AF++M + +V+PN  T ASV+ AC  +   + G+Q
Sbjct: 316 -PDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQ 374

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +HG ++R  L   + V  S+I +YSK G++  A+ VF  +  K+ ++++T+I  Y Q   
Sbjct: 375 IHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSH 434

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-- 652
           ++ A +    M   G +P+     +VLS C    L++ G Q+       Y +    +H  
Sbjct: 435 AKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQV-----HAYALCIGLDHET 489

Query: 653 --YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +  +  M  R G + EA +    +  + N +  W +++     HG+S+ A
Sbjct: 490 MVHSALISMYSRSGNLQEASKIFDSI--KNNDIVSWTAMINGYAEHGYSQEA 539


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/566 (33%), Positives = 318/566 (56%), Gaps = 37/566 (6%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++  ++K G++  +D+F+++  + MYA+ G   FAR++FD   E+N   W+ MI GY Q 
Sbjct: 25  LHAAVLKTGTQ--SDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQA 82

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFV 361
             P  AI+L+ Q+     +V ++  F S +SA + L  + LGQ++H+  +K      +FV
Sbjct: 83  GEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 362 ALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +  +I              V     E + VS+N +I+ FV+N   + GL     M++QG 
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTA 464
           + D      +L   +   N   G + H   ++  +    F G  + +I MY++  LI+ A
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG--NVIITMYSELNLIQEA 256

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPNVVTIASVLPAC 523
            + F   +  ++D  +WN +IA  +      +    F+ M E  NV P+  T  S L AC
Sbjct: 257 EKAFRLIE--EKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAAC 314

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             + ++  GKQ+H   +R  L Q++ VG +L++MY+K G I YA ++F+K+   N V++ 
Sbjct: 315 AGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWN 374

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           T+I G+G HG+ ERA+ LF  M   GI PD++TF+ +L+AC++AGLVD+G   F+ M++ 
Sbjct: 375 TIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEET 434

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y I P  EH+ C+ DMLGR G++ EA E++++     + + +  SLL + RLHG   + E
Sbjct: 435 YGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPV-VLVSLLSASRLHGDVVIGE 493

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
            +AK LL++    + P  +VLLSN+YA +G W++V + RK ++  GL+KE G S I+V G
Sbjct: 494 RLAKWLLKLQPVTTSP--YVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLIEVNG 551

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLA 789
            V +F   D  H +  +I  +L+ L+
Sbjct: 552 SVEKFTIGDFTHLRIKEIKGILKTLS 577



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 231/491 (47%), Gaps = 51/491 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T SS+L  C++T+ LR G ++H   ++  +    F+ N +LNMY+ C  +  A       
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFAR------ 58

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       +VFD M  +N+V+W+ ++S Y +      A+  +  M    + P+   
Sbjct: 59  ------------QVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYV 103

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V  A +SL        ++   +K G E ++  FV++S I MY +      A  +F N
Sbjct: 104 FASVISACASLSAVTLGQKIHSRSLKFGYESIS--FVSNSLISMYMKCNQCSDALSVFTN 161

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             E N   +N +I G+V+N      +E F +++    ++ D   F+  L   +  + L  
Sbjct: 162 TPEPNCVSYNALITGFVENQQLERGLEFF-KLMRQQGLIPDRFAFMGVLGICTTTENLKR 220

Query: 349 GQQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQ 388
           G +LH   +K N  + P I                       + E+DV+SWNT+I+A   
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSH 280

Query: 389 NGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
                +GL +   M ++     D  T T+ L+A + L +   GKQ HA+L+R  ++ + G
Sbjct: 281 CDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLG 340

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L++MYAK G I  A  IF K      +  +WN +IAG+  +GL E A   F QM  
Sbjct: 341 VGNALVNMYAKCGCIGYAYDIFSK--MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNA 398

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVI 564
             + P+ VT   +L ACN  G ++ G QL+  S+   Y +  ++   + LIDM  ++G +
Sbjct: 399 SGIRPDSVTFIGLLTACNHAGLVDKG-QLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRL 457

Query: 565 NYAANVFAKIP 575
           N A     K P
Sbjct: 458 NEAEEYMRKFP 468



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 201/451 (44%), Gaps = 69/451 (15%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    ARQ+FD +     V W+ +I G+     P  AI LYSQM     +   + Y ++S
Sbjct: 52  GHTTFARQVFDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQM-----FLVPNEYVFAS 106

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+ ACA    + +G+ +H   ++       FV NSL++MY  C    DA           
Sbjct: 107 VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDA----------- 155

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    VF      N V++N +++ +V+ ++    +  F++M + G+ P   +F+ V
Sbjct: 156 -------LSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
               ++  + K    ++   VKL  +  +  F+ +  I MY+EL     A K F    E+
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLD--STPFIGNVIITMYSELNLIQEAEKAFRLIEEK 266

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT+I      +   + + +F  + E   +  DD TF SAL+A + L  +  G+Q+
Sbjct: 267 DVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQI 326

Query: 353 HAYIIKNFVALPVIVLNAV--------------------IERDVVSWNTMISAFVQNGLD 392
           HA++++  +   + V NA+                    +  ++VSWNT+I+ F  +GL 
Sbjct: 327 HAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLG 386

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGME--- 448
           +  + L  +M   G   DSVT   LL+A +           HA L+  G ++F  ME   
Sbjct: 387 ERAVELFEQMNASGIRPDSVTFIGLLTACN-----------HAGLVDKGQLYFNSMEETY 435

Query: 449 ---------SYLIDMYAKSGLIKTARQIFEK 470
                    S LIDM  ++G +  A +   K
Sbjct: 436 GIAPDIEHFSCLIDMLGRAGRLNEAEEYMRK 466



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T++S+L  C+    +  G  LH   ++     +VF+   +++MY+K G   +A  VF ++
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            EKN V+++ MI GY Q G  + A+ L+  M    + P+   F +V+SAC+    V  G 
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 635 QI 636
           +I
Sbjct: 122 KI 123


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 313/577 (54%), Gaps = 61/577 (10%)

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           +L   D+AR + D         WN++I  Y  +  P  ++ L++++L        + TF 
Sbjct: 39  DLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLR-SSTKPSNFTFP 97

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------R 374
             L A S L  +  G+Q+H ++++      + V N++I+                    R
Sbjct: 98  FVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFR 157

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEM----------------QKQGFMID-------- 410
           D VSWN++IS +VQ G  ++   L  EM                 K+G  ++        
Sbjct: 158 DEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQM 217

Query: 411 ----------SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
                     + T+  LLSA S L N +VG+    ++  + I     + + LIDMY+K G
Sbjct: 218 LVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCG 277

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            ++ A +IF+      ++  +WNA+I G  Q GLLEEA   +R M   +V PN +T+ +V
Sbjct: 278 DVEKAWRIFDGVSC--KNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNV 335

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G +ELG+++H +  R  LD NV + T+L+DMY+K G I+ A  +F K  EK+ 
Sbjct: 336 LSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDV 395

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
             +  MILG   HG    +L++F  M   G++P+ +TF+ VLSAC+++GLV+EG   F  
Sbjct: 396 ALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSS 455

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  ++ + P  EHY C+ D+LGR G + EAYE V+ +    + + IWG+LL +CR+H + 
Sbjct: 456 MADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSI-IWGALLSACRIHRNL 514

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           ELA+ +++ +  M +++   G+ +LLSNIYA  G W++V +VR++++E+ ++K  GCSW+
Sbjct: 515 ELADKISETI--MASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWV 572

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V G V+RF  +D  H +S +IY   E L   ++  G
Sbjct: 573 EVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLKAEG 609



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 260/592 (43%), Gaps = 80/592 (13%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L QIH +         P     + K+        AR + D    PT   WN++I  +  +
Sbjct: 12  LTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVH 71

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
             P  ++ LY +M +SS  T   N+T+  VLKAC+   ++  G+ +H H +R       F
Sbjct: 72  GSPQNSLFLYLKMLRSS--TKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLF 129

Query: 144 VYNSLLNMYSTCLSSLDA-----------EMVGLKYVEVDYSKYDLVCKVFDTMR----R 188
           V NSL++MY  C   LD+           + V    +   Y ++  V K  D       R
Sbjct: 130 VCNSLIDMYCKCF-RLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMR 188

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSAD 246
           RNVV W  +++ Y K   +VE +  FR ML     ++P+  + V +  A S+L +Y+   
Sbjct: 189 RNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGR 248

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQ 306
            +  + + +    +N + V ++ I MY++ G  + A +IFD    +N   WN +I G VQ
Sbjct: 249 FL-SVFIDVNKIPLNTILV-TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQ 306

Query: 307 NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
                EAI+L+   ++   +  +++T ++ LSA + L  L+LG+++H Y+ +N + L VI
Sbjct: 307 GGLLEEAIDLYRH-MKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVI 365

Query: 367 VLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           +  A++                    E+DV  WN MI     +G   + L +  +M + G
Sbjct: 366 LATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAG 425

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTAR 465
              + VT   +LSA +           H+ L+  G + F  M         K GL     
Sbjct: 426 VQPNDVTFIGVLSACN-----------HSGLVEEGRVQFSSMAD-------KHGLSPKLE 467

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
                          +  M+    + G L+EA+   + ML   + P+ +   ++L AC  
Sbjct: 468 H--------------YACMVDLLGRAGHLKEAYELVQNML---IPPDSIIWGALLSACRI 510

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
             N+EL  ++   +I    D N+     L ++Y+ SG     A V  ++ EK
Sbjct: 511 HRNLELADKISE-TIMASQDPNIGFCILLSNIYASSGRWKDVARVRRQVKEK 561



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 44/297 (14%)

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q HA  L HG+  +  +   LID+++    I  AR + ++  S      +WN++I  YT 
Sbjct: 17  QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPS--PTDFSWNSLIRAYTV 70

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +G  + +   + +ML  +  P+  T   VL AC+ +G++  G+Q+H   +R     ++FV
Sbjct: 71  HGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFV 130

Query: 551 GTSLIDMYSKS-------------------------------GVINYAANVFAKIP-EKN 578
             SLIDMY K                                G +  A ++F ++P  +N
Sbjct: 131 CNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRN 190

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSM--KGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
            V +T MI GYG+ G     LSLFR M      ++P+A T V +LSACS     + G + 
Sbjct: 191 VVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVG-RF 249

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
             +     KI  +T     + DM  + G V +A+      G     L  W +++  C
Sbjct: 250 LSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFD--GVSCKNLPSWNAIITGC 304


>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 640

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 212/689 (30%), Positives = 342/689 (49%), Gaps = 68/689 (9%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           S +LK C   R+L+    +H H +   S   S    N LL +YS             K+ 
Sbjct: 7   SKLLKQC---RSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYS-------------KFG 50

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
            V Y+      K+FD     N   W  ++  + +  +Y  A   F  M R  I P   + 
Sbjct: 51  AVSYAH-----KLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTI 105

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A+S LG  K  D+VYGL V+ G E+  DL V +  I ++   G    AR++FD  
Sbjct: 106 ASVLKAVSRLGRIKDGDLVYGLAVRCGYEF--DLVVKNVMIELFMRCGEMGSARQMFDEM 163

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDL 348
            ER+   WN+MI GY  N             +++   +FD +   + +S  S +Q  +  
Sbjct: 164 EERDAVSWNSMITGYGNNGR-----------VDIARKLFDRMEERNVISWTSMIQGYVKA 212

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG-----LDDEGLMLVYEMQ 403
           G  L A ++  F  +P        E+D+ SW  M+SA++  G      +   LM ++++ 
Sbjct: 213 GDLLEARVL--FERMP--------EKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVG 262

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
               MI        + AA    ++   +   ++++            +ID Y K G +  
Sbjct: 263 TWNLMISGCCKAGEMDAAKEFFDRMQERNVASWVM------------IIDGYIKVGDVDA 310

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR +F++    +++   W+ MI GY + G    +   ++   E  + P+      ++ AC
Sbjct: 311 ARSVFDQMP--EKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISAC 368

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           + +G  +  + +    +   L  N+ V TSLIDMY+K G I  A  VF  + +K+   Y+
Sbjct: 369 SQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYS 428

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           T+I  +  HG+SE A+SLF  M+   I+PD + F+ VL+AC++ GLV EG ++F  M  E
Sbjct: 429 TVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDE 488

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y IQPS +HY C+ D+LGR G + EA+  +  +    N   +WG+LL +CR+H + +LAE
Sbjct: 489 YGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNA-TVWGALLSACRVHLNVQLAE 547

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
             A +L +++  NS  G +VLL NIYA+ G W++  KVR  +RE  +RK  G SWI++G 
Sbjct: 548 AAATELFQIEPNNS--GNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGS 605

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEM 792
            ++ F   D+ H  S +I+ MLE L  +M
Sbjct: 606 VIHEFVMGDKSHFDSERIFFMLELLCKDM 634



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 141/593 (23%), Positives = 239/593 (40%), Gaps = 121/593 (20%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+   L    + G    A +LFD    P + +W  +I GF  NN    A   + +M + +
Sbjct: 38  TLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHREN 97

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
                 N+T +SVLKA +    ++ G  V+   +RC       V N ++ ++  C     
Sbjct: 98  IVPL--NFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGS 155

Query: 161 AEMVGLKYVEVDY-------------SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERY 207
           A  +  +  E D               + D+  K+FD M  RNV++W +++  YVK    
Sbjct: 156 ARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDL 215

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL--------------- 252
           +EA    R++          S+  +  A  S+G+  +A  ++ L+               
Sbjct: 216 LEA----RVLFERMPEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGC 271

Query: 253 VKLGS-EYVNDLF-------VASSAIFM--YAELGCFDFARKIFDNCLERNTEVWNTMIG 302
            K G  +   + F       VAS  + +  Y ++G  D AR +FD   E+N   W+TMIG
Sbjct: 272 CKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIG 331

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GY +  HP  +++L+ +  +   I  D+   L  +SA SQL   D  +     +I +FV 
Sbjct: 332 GYAKTGHPYSSLKLY-KTFKEQGIKPDETFALGIISACSQLGVPDTAES----VICDFVG 386

Query: 363 ------LPVI------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
                 L V+                  V   V ++D+  ++T+I+AF  +GL ++ + L
Sbjct: 387 PSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISL 446

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
             EMQK     D V    +L+A +                 HG                 
Sbjct: 447 FSEMQKANIKPDGVAFLGVLTACN-----------------HG----------------- 472

Query: 459 GLIKTARQIFEK--NDSGDR-DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           GL+   R++F +  ++ G +  +  +  M+    + G LEEA      M    V PN   
Sbjct: 473 GLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSM---PVAPNATV 529

Query: 516 IASVLPACNPMGNIELGKQLHG--FSIR------YLLDQNVFVGTSLIDMYSK 560
             ++L AC    N++L +      F I       Y+L  N++      D +SK
Sbjct: 530 WGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSK 582


>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 228/782 (29%), Positives = 377/782 (48%), Gaps = 115/782 (14%)

Query: 66  TRPTTVIWNTIIIGFVCNN-LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
           T   T  +N   + ++C+N L  EAI     + K     S +  TY ++L+ C +  ++ 
Sbjct: 40  TYKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTN--TYINLLQTCIDVGSIE 97

Query: 125 IGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
           +G+ +H         NP  FV   L++MY+ C    DA                   KVF
Sbjct: 98  LGRELHVRMGLVHRVNP--FVETKLVSMYAKCGCLKDAR------------------KVF 137

Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYK 243
           D M+ RN+  W+ ++  Y + +R+ E V  F +M+  G+ P    F  +  A  +  D +
Sbjct: 138 DGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLE 197

Query: 244 SADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
           +  +++ L+++ G S Y+    +++S +  + + G    ARK F N  ER+   WN MI 
Sbjct: 198 TVKLIHSLVIRCGLSCYMR---LSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIA 254

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           GY Q  +  EA  L +  +         VT+   +++ SQL + DL            + 
Sbjct: 255 GYCQKGNGDEARRL-LDTMSNQGFKPGLVTYNIMIASYSQLGDCDL-----------VID 302

Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
           L   + +  +  DV +W +MIS F Q+    + L    +M   G   +++T+ +  SA +
Sbjct: 303 LKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACA 362

Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIF----EKN------ 471
           +L++   G + H + ++ GI  E +  + LIDMY+K G ++ AR +F    EK+      
Sbjct: 363 SLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNS 422

Query: 472 -----------------------------------------DSGDRDQA----------- 479
                                                     +GD DQA           
Sbjct: 423 MIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDG 482

Query: 480 -------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC-NPMGNIEL 531
                  +WN++IAGY Q G   +A   FRQM   N +PN VTI S+LPAC N M   ++
Sbjct: 483 GVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKI 542

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            K++HG  +R  L+  + V  SL+D Y+KSG I Y+  VF  +  K+ +T+ ++I GY  
Sbjct: 543 -KEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYIL 601

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG S+ A  LF  M+  GI P+  T  +++ A   AG+VD+G  +F  + +E++I P+ +
Sbjct: 602 HGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLD 661

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY  + D+ GR G++ +A EF++++  E +V  IW SLL +CR HG+  LA + AK+L E
Sbjct: 662 HYLAMVDLYGRSGRLADAIEFIEDMPIEPDV-SIWTSLLTACRFHGNLNLAVLAAKRLHE 720

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           ++  N +   + LL   YA  G +E   KVRK  +E  ++K     W++V   V+ F + 
Sbjct: 721 LEPDNHV--IYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTG 778

Query: 772 DQ 773
           DQ
Sbjct: 779 DQ 780



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 25/205 (12%)

Query: 41  TIRSRLSKICQEGRPHLARQLF-----DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           T  + +S   Q G    A  LF     D   +  T  WN++I G+       +A+ ++ Q
Sbjct: 454 TWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQ 513

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M+  S   S ++ T  S+L ACA     +  K +H   +R        V NSL++ Y+  
Sbjct: 514 MQ--SLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYA-- 569

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                      K   + YS+      VF+ M  ++++ WN+I++ Y+       A + F 
Sbjct: 570 -----------KSGNIKYSR-----TVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFD 613

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            M  +GIRP+  +  ++  A    G
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAG 638


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 175/459 (38%), Positives = 270/459 (58%), Gaps = 38/459 (8%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           V + +V SWN++I+   ++G   E L     M+K     +  T    + + S L +   G
Sbjct: 36  VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95

Query: 431 KQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFE------------------ 469
           +Q H   L  G  FE    + S L+DMY+K G ++ AR +F+                  
Sbjct: 96  RQAHQQALIFG--FEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 470 KNDSG-----------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIA 517
           +ND             +RD  +WN++IA Y QNG+  E+   F +M++   +  N VT++
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
           +VL AC   G+  LGK +H   I+  L+ NVFVGTS+IDMY K G +  A   F ++ EK
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273

Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF 637
           N  +++ M+ GYG HG ++ AL +F  M   G++P+ ITFV+VL+ACS+AGL++EG   F
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 333

Query: 638 DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
             M  E+ ++P  EHY C+ D+LGR G + EA++ +K +    + + +WG+LLG+CR+H 
Sbjct: 334 KAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFV-VWGALLGACRMHK 392

Query: 698 HSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCS 757
           + +L E+ A+KL E+D +N   GY+VLLSNIYA+ G WE+V+++R  M+  GL K  G S
Sbjct: 393 NVDLGEISARKLFELDPKNC--GYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 450

Query: 758 WIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            +D+ G V+ F   D+EHPQ  KIYE LE+L+M+++  G
Sbjct: 451 LVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVG 489



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 37/416 (8%)

Query: 61  LFDSITRPTTVI-WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           LF+     T V  WN++I     +    EA+  +S M+K S     +  T+   +K+C+ 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS--LKPNRSTFPCAIKSCSA 88

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG-------------- 165
             +L  G+  H   +     P  FV ++L++MYS C    DA  +               
Sbjct: 89  LLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 148

Query: 166 -LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IR 223
              YV+ D +   L  +VFD M  R+V++WN+I++ Y +     E++  F  M++ G I 
Sbjct: 149 ITGYVQNDDAHRAL--RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            + ++   V  A +  G  +    ++  ++K+G E  +++FV +S I MY + G  + AR
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLE--SNVFVGTSIIDMYCKCGKVEMAR 264

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K FD   E+N + W+ M+ GY  + H  EA+E+F + + +  +  + +TF+S L+A S  
Sbjct: 265 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYE-MNMAGVKPNYITFVSVLAACSHA 323

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             L+ G      +   F   P           V  +  M+    + G   E   L+  M+
Sbjct: 324 GLLEEGWHWFKAMSHEFDVEP----------GVEHYGCMVDLLGRAGYLKEAFDLIKGMK 373

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
            +    D V   ALL A    +N D+G+ +   L        G    L ++YA +G
Sbjct: 374 LRP---DFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAG 426



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 171/397 (43%), Gaps = 87/397 (21%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + NV +WN++++   ++   VEA+R F  M ++ ++P+  +F     + S+L D  S   
Sbjct: 38  KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            +   +  G E   DLFV+S+ + MY++ G    AR +FD    RN   W +MI GYVQN
Sbjct: 98  AHQQALIFGFE--PDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155

Query: 308 NHP-------------------------------VEAIELFVQVLELDEIVFDDVTFLSA 336
           +                                  E++E+F ++++  EI ++ VT  + 
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215

Query: 337 LSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDV 376
           L A +      LG+ +H  +IK  +   V V  ++I                    E++V
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNV 275

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SW+ M++ +  +G   E L + YEM   G   + +T  ++L+A S           HA 
Sbjct: 276 KSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS-----------HAG 324

Query: 437 LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           LL  G H+    S+  D+  + G+                    +  M+    + G L+E
Sbjct: 325 LLEEGWHWFKAMSHEFDV--EPGV------------------EHYGCMVDLLGRAGYLKE 364

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
           AF   + M    + P+ V   ++L AC    N++LG+
Sbjct: 365 AFDLIKGM---KLRPDFVVWGALLGACRMHKNVDLGE 398



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           +L    +L   I      +  S ++   Q    H A ++FD +     + WN+II  +  
Sbjct: 126 ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQ 185

Query: 83  NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
           N +  E++ ++ +M K     + +  T S+VL ACA + + R+GK +H   I+     + 
Sbjct: 186 NGMSTESMEIFHRMVKDGE-INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 244

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV  S+++MY  C                   K ++  K FD MR +NV +W+ +V+ Y 
Sbjct: 245 FVGTSIIDMYCKC------------------GKVEMARKAFDRMREKNVKSWSAMVAGYG 286

Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
                 EA+  F  M   G++P+ I+FV+V  A S  G
Sbjct: 287 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 190/556 (34%), Positives = 298/556 (53%), Gaps = 60/556 (10%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WNTMI G+  ++ PV ++ L+V ++ L  ++ +  TF   L + 
Sbjct: 16  YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLG-LLPNSYTFPFLLKSC 74

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------- 373
           ++ +    GQQ+H  ++K    L + V  ++I                            
Sbjct: 75  AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134

Query: 374 ------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                   +DVVSWN MIS + + G   E L L  EM K     
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRP 194

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T   +LSA ++  + ++G+Q H+++  HG      + + LID+Y+K G ++TA  +F
Sbjct: 195 DESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLF 254

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +      +D  +WN +I GYT   L +EA + F++ML    TPN VT+ SVLPAC  +G 
Sbjct: 255 QGLSY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 529 IELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           I++G+ +H +  + L  +     + TSLIDMY+K G I  A  VF  +  K+  ++  MI
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            G+  HG ++ +  LF  M+  GIEPD ITFV +LSACS++G++D G  IF  M Q+YK+
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 432

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ ELAE  A
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMHGNVELAESFA 491

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           + L++++  N  P  ++LLSNIYA  G WE+V ++R  +  + ++K  GCS I+V   V 
Sbjct: 492 QNLIKIEPEN--PSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVF 549

Query: 767 RFASKDQEHPQSHKIY 782
            F   D+ HPQ+ +IY
Sbjct: 550 EFVVGDKFHPQNREIY 565



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 242/497 (48%), Gaps = 63/497 (12%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+T++  N + WNT++  +  +   V ++  +  M+ +G+ P++ +F  +  + +    
Sbjct: 20  VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMY---------------------------- 273
           +     ++G ++KLG +   DL+V +S I MY                            
Sbjct: 80  FTEGQQIHGQVLKLGFDL--DLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALI 137

Query: 274 ---AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
              A  G    A+K+FD    ++   WN MI GY +     EA+ELF ++++++ +  D+
Sbjct: 138 TGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN-VRPDE 196

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------- 373
            T+++ LSA +    ++LG+Q+H+++  +     + ++NA+I+                 
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              +DV+SWNT+I  +    L  E L+L  EM + G   + VT+ ++L A ++L   D+G
Sbjct: 257 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIG 316

Query: 431 KQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +  H Y+   L+   +   + + LIDMYAK G I+ A Q+F  N    +  ++WNAMI G
Sbjct: 317 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF--NSMLHKSLSSWNAMIFG 374

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQ 546
           +  +G  + +F  F +M +  + P+ +T   +L AC+  G ++LG+ +    +  Y +  
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            +     +ID+   SG+   A  +   +  E + V + +++     HG  E A S  +++
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 606 KGCGIEPDAITFVAVLS 622
               IEP+  +   +LS
Sbjct: 495 --IKIEPENPSSYILLS 509



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 226/483 (46%), Gaps = 44/483 (9%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWNT+I G   ++ P  ++ LY  M         ++YT+ 
Sbjct: 12  DGLPY-ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLP--NSYTFP 68

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++    G+ +H   ++   +   +V+ SL++MY       DA  V  +    
Sbjct: 69  FLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHR 128

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              K+FD +  ++VV+WN ++S Y +T  Y EA+  F  M+
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMM 188

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +M +RP   ++V V  A +  G  +    V+  +   G  + ++L + ++ I +Y++ G 
Sbjct: 189 KMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHG--FDSNLKIVNALIDLYSKCGE 246

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F     ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 247 VETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSVLP 305

Query: 339 AVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIERDV 376
           A + L  +D+G+ +H YI K                        +     V N+++ + +
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SWN MI  F  +G  D    L   M+K G   D +T   LLSA S+    D+G+     
Sbjct: 366 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 425

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           + +       +E Y  +ID+   SGL K A ++    +  + D   W +++     +G +
Sbjct: 426 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM-EPDGVIWCSLLKACKMHGNV 484

Query: 495 EEA 497
           E A
Sbjct: 485 ELA 487



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 190/404 (47%), Gaps = 38/404 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LFD I     V WN +I G+       EA+ L+ +M K +     D  TY +VL AC
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN--VRPDESTYVTVLSAC 206

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A + ++ +G+ VH        + +  + N+L+++YS C                   + +
Sbjct: 207 AHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC------------------GEVE 248

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C +F  +  ++V++WNT++  Y     Y EA+  F+ MLR G  P+ ++ ++V PA +
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACA 308

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K      N   + +S I MYA+ G  + A ++F++ L ++   W
Sbjct: 309 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSW 368

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  +     + +LF ++ ++  I  DD+TF+  LSA S    LDLG+ +   + 
Sbjct: 369 NAMIFGFAMHGRADASFDLFSRMRKIG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 427

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           +++   P           +  +  MI     +GL  E   ++  M+ +    D V   +L
Sbjct: 428 QDYKMTP----------KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP---DGVIWCSL 474

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
           L A     N ++ +     L++  I  E   SY++  ++YA +G
Sbjct: 475 LKACKMHGNVELAESFAQNLIK--IEPENPSSYILLSNIYASAG 516


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 227/729 (31%), Positives = 373/729 (51%), Gaps = 71/729 (9%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLDAEMV 164
           +N TY+ +L+ CA  + L  G+ +H   ++    P   +  N +++MY+ C S  DA+  
Sbjct: 42  ENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAA 101

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
                             FD + +RN+ +W  +V+ +  + +  E +R    M + G+RP
Sbjct: 102 ------------------FDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRP 143

Query: 225 STISFVNVFPALSSLGDYKS-ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
             ++F+    AL S GD +S  D +    + + S    D  V+++ + MY + G    A+
Sbjct: 144 DAVTFIT---ALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAK 200

Query: 284 KIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIE--LFVQVLELDEIVFDDVTFLSALSA 339
           ++F   +ER   V  W+ M G +  + +  EA+    F+ +L +       VT LSA S+
Sbjct: 201 RVFAK-MERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSS 259

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDVV 377
            + +Q+   G+ +H+ I  +     ++V NAV+                       RDVV
Sbjct: 260 PALVQD---GRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVV 316

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN M+SA+V N    + + L   MQ      D VT  +LLSA S+  +  +G+  H  +
Sbjct: 317 SWNIMLSAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQI 373

Query: 438 LRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           +   +    +  + L+ MYAK G    AR +F+K +   R   +W  +I+ Y +  L+ E
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME--QRSIISWTTIISAYVRRRLVAE 431

Query: 497 AFVAFRQMLE-------HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           A   F+QMLE         V P+ +   ++L AC  +  +E GK +   +    L  +  
Sbjct: 432 ACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKA 491

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGC 608
           VGT+++++Y K G I     +F  +  +  V  +  MI  Y Q G S  AL LF  M+  
Sbjct: 492 VGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEME 551

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK-IQPSTEHYCCVADMLGRVGKVV 667
           G+ PD+ +FV++L ACS+ GL D+G   F  M  EY+ +  + +H+ CVAD+LGR G++ 
Sbjct: 552 GVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLK 611

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSN 727
           EA EF+++L  + + +  W SLL +CR H   + A+ VA KLL ++ R +  GY V LSN
Sbjct: 612 EAEEFLEKLPVKPDAVA-WTSLLAACRNHRDLKRAKEVANKLLRLEPRCA-TGY-VALSN 668

Query: 728 IYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLER 787
           IYAE   W  V KVRK M E+G++KE G S I++G Y++ FA+ D  HP++ +I E L +
Sbjct: 669 IYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAK 728

Query: 788 LAMEMRNAG 796
           L  +M+  G
Sbjct: 729 LHSQMKECG 737



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 178/392 (45%), Gaps = 48/392 (12%)

Query: 58  ARQLFDSITRP--TTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           AR++FD++       V WN ++  +V N+   +AI LY +M+  +     D  TY S+L 
Sbjct: 301 ARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA-----DKVTYVSLLS 355

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC+   ++ +G+ +H   +      +  V N+L++MY+ C S  +A              
Sbjct: 356 ACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARA------------ 403

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-------GIRPSTIS 228
                 VFD M +R++++W TI+S YV+     EA   F+ ML +        ++P  ++
Sbjct: 404 ------VFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALA 457

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           FV +  A + +   +   +V       G    +D  V ++ + +Y + G  +  R+IFD 
Sbjct: 458 FVTILNACADVSALEQGKMVSEQAASCG--LSSDKAVGTAVVNLYGKCGEIEEGRRIFDG 515

Query: 289 -CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
            C   + ++WN MI  Y Q     EA++LF + +E++ +  D  +F+S L A S     D
Sbjct: 516 VCSRPDVQLWNAMIAVYAQFGQSHEALKLFWR-MEMEGVRPDSFSFVSILLACSHTGLED 574

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            G+         F ++     N  + R +  +  +     + G   E       ++K   
Sbjct: 575 QGKSY-------FTSMTTEYRN--VTRTIQHFGCVADLLGRGGRLKEAEEF---LEKLPV 622

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
             D+V  T+LL+A  N R+    K+    LLR
Sbjct: 623 KPDAVAWTSLLAACRNHRDLKRAKEVANKLLR 654



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 140/303 (46%), Gaps = 18/303 (5%)

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMY 455
           V +++KQ    ++ T   LL   +  +    G++ H+  ++H +   G   + ++++ MY
Sbjct: 31  VLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNL-LPGNLILGNHIVSMY 89

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A       A+  F+  +   R+  +W  ++A +  +G  +E   A  +M +  V P+ VT
Sbjct: 90  AHCDSPGDAKAAFDALE--QRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 147

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
             + L +C    ++  G ++H   +   L+ +  V  +L++MY K G +++A  VFAK+ 
Sbjct: 148 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 207

Query: 576 E-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
             +N ++++ M   +  HG    AL  FR M   GI+      V +LSACS   LV +G 
Sbjct: 208 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 267

Query: 635 QIFDLM-----QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            I   +     + E  +  +      V  M GR G V EA +    + E    +  W  +
Sbjct: 268 LIHSCIALSGFESELLVANA------VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIM 321

Query: 690 LGS 692
           L +
Sbjct: 322 LSA 324


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 216/742 (29%), Positives = 361/742 (48%), Gaps = 84/742 (11%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           +A+ LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V K
Sbjct: 102 IAQVLFSKLRVRNVFSW-AAIIGVKCRIGLGEGALMGFVEMLENGIFP--DNFVVPNVCK 158

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC   +  R G+ VH +  +   +   FV +SL +MY  C    DA              
Sbjct: 159 ACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDAR------------- 205

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                KVFD +  RN VAWN ++  YV+     EA+R    M + GI P+ ++      A
Sbjct: 206 -----KVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSA 260

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +++G  +     +   +  G     D  + +S +  Y  +G  ++A  IFD  +E+   
Sbjct: 261 SANMGGIEEGKQSHAXXIVNGLXL--DNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXV 318

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +I GYVQ     EAI +  Q++  + + FD VT  + +SA +  Q L LG+++  Y
Sbjct: 319 TWNLLISGYVQQGLVEEAIHM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCY 377

Query: 356 IIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            I++ +   ++                    V ++ +++D++ WNT++SA+  +GL  E 
Sbjct: 378 CIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEA 437

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L YEMQ +    + +T   ++ +                LLR+G   E  E +L    
Sbjct: 438 LRLFYEMQLESVPPNVITWNLIILS----------------LLRNGQVNEAKEMFL--QM 479

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
             SG+                +  +W  M+ G  QNG  EEA +  R+M E  + PN  T
Sbjct: 480 QSSGIFP--------------NLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFT 525

Query: 516 IASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           I   L AC  + ++  G+ +HG+ IR      + ++ TSL+DMY+K G IN A  VF   
Sbjct: 526 ITVALSACANLASLHFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSK 585

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
                  Y  MI  Y  +G    A++L+RS++  G++PD IT  ++LSAC+Y   V++ +
Sbjct: 586 LCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAI 645

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
           ++F  M  ++ ++P  EHY  + D+L   G+  +A   ++E+  + +   +  SL  SC 
Sbjct: 646 EVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMV-QSLFESCS 704

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
               +EL E ++K LLE +  NS  G +V++SN YA EG+W+ V K+R+ M+ +GL+K+ 
Sbjct: 705 KQHKTELVEYLSKHLLESEPDNS--GNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKP 762

Query: 755 GCSWIDVGGY---VNRFASKDQ 773
           GCSWI + G    V+ F + D+
Sbjct: 763 GCSWIQIKGEEEGVHVFVANDK 784



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 237/461 (51%), Gaps = 25/461 (5%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A+ +F     RN   W  +
Sbjct: 62  DLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAI 121

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE + I  D+    +   A   LQ    G+ +H Y+ K  
Sbjct: 122 IGVKCRIGLGEGALMGFVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 180

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + +R+ V+WN ++  +VQNG+++E + L+ 
Sbjct: 181 LHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLS 240

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           EM+K+G     VTV+  LSA++N+   + GKQ+HA  + +G+  +  + + +++ Y   G
Sbjct: 241 EMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVG 300

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF+     ++   TWN +I+GY Q GL+EEA    + M   N+  + VT++++
Sbjct: 301 LIEYAEMIFDGMI--EKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTL 358

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++  + IR+ L+ ++ + ++ +DMY+K G I  A  VF    +K+ 
Sbjct: 359 MSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDL 418

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y   G+S  AL LF  M+   + P+ IT+  ++ +    G V+E  ++F L
Sbjct: 419 ILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMF-L 477

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
             Q   I P+   +  + + L + G   EA  F++++ E G
Sbjct: 478 QMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESG 518



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 181/376 (48%), Gaps = 36/376 (9%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  GQQ+HA I+K         ++   +++  A  +              R+V SW  
Sbjct: 61  RDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 120

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM + G   D+  V  +  A   L+    G+  H Y+ + G
Sbjct: 121 IIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAG 180

Query: 442 IHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K G++  AR++F+     DR+   WNA++ GY QNG+ EEA   
Sbjct: 181 LHHCVFVASSLADMYGKCGVLDDARKVFDYIP--DRNAVAWNALMVGYVQNGMNEEAIRL 238

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
             +M +  + P  VT+++ L A   MG IE GKQ H   I   L  +  +GTS+++ Y  
Sbjct: 239 LSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCX 298

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F  + EK  VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 299 VGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTL 358

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    +  G +I     Q Y I+   E    +A    DM  + G +V A +     
Sbjct: 359 MSAATSTQNLKLGKEI-----QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDST 413

Query: 677 GEEGNVLEIWGSLLGS 692
            ++  +L  W +LL +
Sbjct: 414 VQKDLIL--WNTLLSA 427



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 137/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   G+Q HA +L+ G 
Sbjct: 19  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 78

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A+ +F K     R+  +W A+I    + GL E A +
Sbjct: 79  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRV--RNVFSWAAIIGVKCRIGLGEGALM 136

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+  +  L   VFV +SL DMY 
Sbjct: 137 GFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYG 196

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF  IP++N+V +  +++GY Q+GM+E A+ L   M+  GIEP  +T   
Sbjct: 197 KCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVST 256

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G ++EG Q
Sbjct: 257 CLSASANMGGIEEGKQ 272



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 202/451 (44%), Gaps = 79/451 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C  G    A  +FD +     V WN +I G+V   L  EAI +   M++ +   
Sbjct: 291 SILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKF 350

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A   T+NL++GK + C+ IR        + ++ ++MY+ C S ++A+ 
Sbjct: 351 DC--VTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAK- 407

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+  +++++ WNT++S Y  +    EA+R F  M    + 
Sbjct: 408 -----------------KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVP 450

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++  +  +L   G    A  ++             L + SS IF            
Sbjct: 451 PNVITWNLIILSLLRNGQVNEAKEMF-------------LQMQSSGIF------------ 485

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G VQN    EAI LF++ ++   +  +  T   ALSA + L
Sbjct: 486 --------PNLISWTTMMNGLVQNGCSEEAI-LFLRKMQESGLRPNAFTITVALSACANL 536

Query: 344 QELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSWNTM 382
             L  G+ +H YII+N       ++   ++              V  + +  ++  +N M
Sbjct: 537 ASLHFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAM 596

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHG 441
           ISA+   G   E + L   ++  G   D++T+T+LLSA +  R+ +   +  + ++ +HG
Sbjct: 597 ISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHG 656

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           +    +E Y  ++D+ A +G    A ++ E+
Sbjct: 657 MK-PCLEHYGLMVDLLASAGETDKALRLMEE 686


>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 228/783 (29%), Positives = 377/783 (48%), Gaps = 115/783 (14%)

Query: 65  ITRPTTVIWNTIIIGFVCNN-LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
            T   T  +N   + ++C+N L  EAI     + K     S +  TY ++L+ C +  ++
Sbjct: 39  FTYKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTN--TYINLLQTCIDVGSI 96

Query: 124 RIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
            +G+ +H         NP  FV   L++MY+ C    DA                   KV
Sbjct: 97  ELGRELHVRMGLVHRVNP--FVETKLVSMYAKCGCLKDAR------------------KV 136

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
           FD M+ RN+  W+ ++  Y + +R+ E V  F +M+  G+ P    F  +  A  +  D 
Sbjct: 137 FDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDL 196

Query: 243 KSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           ++  +++ L+++ G S Y+    +++S +  + + G    ARK F N  ER+   WN MI
Sbjct: 197 ETVKLIHSLVIRCGLSCYMR---LSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMI 253

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GY Q  +  EA  L +  +         VT+   +++ SQL + DL            +
Sbjct: 254 AGYCQKGNGDEARRL-LDTMSNQGFKPGLVTYNIMIASYSQLGDCDL-----------VI 301

Query: 362 ALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
            L   + +  +  DV +W +MIS F Q+    + L    +M   G   +++T+ +  SA 
Sbjct: 302 DLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSAC 361

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIF----EKN----- 471
           ++L++   G + H + ++ GI  E +  + LIDMY+K G ++ AR +F    EK+     
Sbjct: 362 ASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWN 421

Query: 472 ------------------------------------------DSGDRDQA---------- 479
                                                      +GD DQA          
Sbjct: 422 SMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKD 481

Query: 480 --------TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC-NPMGNIE 530
                   +WN++IAGY Q G   +A   FRQM   N +PN VTI S+LPAC N M   +
Sbjct: 482 GGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKK 541

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           + K++HG  +R  L+  + V  SL+D Y+KSG I Y+  VF  +  K+ +T+ ++I GY 
Sbjct: 542 I-KEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYI 600

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG S+ A  LF  M+  GI P+  T  +++ A   AG+VD+G  +F  + +E++I P+ 
Sbjct: 601 LHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTL 660

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           +HY  + D+ GR G++ +A EF++++  E +V  IW SLL +CR HG+  LA + AK+L 
Sbjct: 661 DHYLAMVDLYGRSGRLADAIEFIEDMPIEPDV-SIWTSLLTACRFHGNLNLAVLAAKRLH 719

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  N +   + LL   YA  G +E   KVRK  +E  ++K     W++V   V+ F +
Sbjct: 720 ELEPDNHV--IYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVT 777

Query: 771 KDQ 773
            DQ
Sbjct: 778 GDQ 780



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 25/205 (12%)

Query: 41  TIRSRLSKICQEGRPHLARQLF-----DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ 95
           T  + +S   Q G    A  LF     D   +  T  WN++I G+       +A+ ++ Q
Sbjct: 454 TWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQ 513

Query: 96  MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
           M+  S   S ++ T  S+L ACA     +  K +H   +R        V NSL++ Y+  
Sbjct: 514 MQ--SLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYA-- 569

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                      K   + YS+      VF+ M  ++++ WN+I++ Y+       A + F 
Sbjct: 570 -----------KSGNIKYSR-----TVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFD 613

Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
            M  +GIRP+  +  ++  A    G
Sbjct: 614 QMRNLGIRPNRGTLASIIHAYGIAG 638


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 300/543 (55%), Gaps = 28/543 (5%)

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
             G  ++A K F    E +  +WN +I GY Q N     I +++  +++ ++  +  TFL
Sbjct: 46  HFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMD-MQISQVHPNCFTFL 104

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
             L A        +G+Q+H    K      V V N+++                    +R
Sbjct: 105 YVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDR 164

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            VVSW ++IS +VQNG   E L +  EM++     D + + ++++A +N+ +   GK  H
Sbjct: 165 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 224

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
             + + G+ FE  +   L  MYAK GL++ AR  F + +    +   WNAMI+GY  NG 
Sbjct: 225 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGY 282

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA   FR+M+  N+  + +T+ S + A   +G++EL + L G+  +     + FV T 
Sbjct: 283 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 342

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LIDMY+K G I  A  VF ++ +K+ V ++ MI+GYG HG  + A+ L+  MK  G+ P+
Sbjct: 343 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 402

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
             TF+ +L+AC  +GLV EG ++F LM  ++ I+P  +HY CV D+LGR G + +AY+F+
Sbjct: 403 DGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 461

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +  +  V  +WG+LL +C++H    L E+ A++L  +D  N+  G++V LSN+YA   
Sbjct: 462 MSMPIKPGV-SVWGALLSACKIHRKVRLGEIAAEQLFILDPYNT--GHYVQLSNLYASAH 518

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W  V  VR  M ++GL K++G S I++ G +  F   D+ HP+S +I+E L+RL   ++
Sbjct: 519 LWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLK 578

Query: 794 NAG 796
            AG
Sbjct: 579 AAG 581



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 212/433 (48%), Gaps = 44/433 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + A + F  ++ P  ++WN II G+   N+    I +Y  M+ S  + +C  +T+  
Sbjct: 48  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC--FTFLY 105

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC  T    IGK +H    +     + FV NSL++MY+             K+ ++ 
Sbjct: 106 VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYA-------------KFGQIS 152

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y++      VFD +  R VV+W +I+S YV+    +EA+  F+ M +  ++P  I+ V+V
Sbjct: 153 YARI-----VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSV 207

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +++ D      ++GL+ KLG E+  D+ ++ +   MYA+ G  + AR  F+   + 
Sbjct: 208 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTT--MYAKRGLVEVARFFFNRMEKP 265

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +WN MI GY  N +  EAI+LF +++    I  D +T  SA+ A +Q+  L+L + L
Sbjct: 266 NLILWNAMISGYANNGYGEEAIKLFREMIT-KNIRVDSITMRSAVLASAQVGSLELARWL 324

Query: 353 HAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
             YI K+      FV   +I              V + V ++DVV W+ MI  +  +G  
Sbjct: 325 DGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHG 384

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYL 451
            E + L  EM++ G   +  T   LL+A  N      G +    +  HGI       S +
Sbjct: 385 QEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCV 444

Query: 452 IDMYAKSGLIKTA 464
           +D+  ++G +  A
Sbjct: 445 VDLLGRAGYLNQA 457



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 23/309 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + G+   AR +FD +   T V W +II G+V N  P EA+ ++ +M++ +   
Sbjct: 140 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN--V 197

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D     SV+ A     +L  GK++H    +        +  SL  MY+          
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA---------- 247

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K   V+ +++      F+ M + N++ WN ++S Y       EA++ FR M+   IR
Sbjct: 248 ---KRGLVEVARF-----FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 299

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
             +I+  +   A + +G  + A  + G + K  SEY +D FV +  I MYA+ G    AR
Sbjct: 300 VDSITMRSAVLASAQVGSLELARWLDGYISK--SEYRDDTFVNTGLIDMYAKCGSIYLAR 357

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD   +++  +W+ MI GY  + H  EAI L+ ++ +   +  +D TF+  L+A    
Sbjct: 358 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG-VCPNDGTFIGLLTACKNS 416

Query: 344 QELDLGQQL 352
             +  G +L
Sbjct: 417 GLVKEGWEL 425


>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/611 (30%), Positives = 324/611 (53%), Gaps = 59/611 (9%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD +   +     + ++ Y +     EA+R F  M +  +R    +   +F + +SL 
Sbjct: 51  QVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLL 110

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  V+ L+++ G  + + +F  ++ I  YA++     A  IFD  L ++T  +N +
Sbjct: 111 AIDVGKQVHSLVIRYG--FHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I  Y ++   + A ELF                                           
Sbjct: 169 ISAYSRSGEVLAARELF------------------------------------------- 185

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                   + + +R +VSWN MIS + QNG   +G ++   MQ +    + +T+  +LS 
Sbjct: 186 --------DKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSI 237

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            + L + ++G +         +    + S  +++MY K G +   R +F+      RD  
Sbjct: 238 CAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH--MARRDVV 295

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           TW+AMIAGY QNG   EA   F  M    + PN VT+ SVL AC  +G++E G+++  + 
Sbjct: 296 TWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV 355

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
               L  NV+V ++L+ MYSK G I  A  +F K+P++++VT+ +MI+G   +G +E A+
Sbjct: 356 ESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAI 415

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
           +L+  MK   ++P+ ITFV +++AC++AG V+ GL+ F  M+ ++ I P+ EH+ C+ D+
Sbjct: 416 ALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDL 475

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
             R G++++AYEF+  +  E NV+ IWG+LL + R+H + ELAE+  KKLLE++  NS  
Sbjct: 476 FCRSGRLIDAYEFICRMEVEPNVV-IWGTLLSASRIHLNVELAELAGKKLLELEPDNS-- 532

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G +V+LSNIYA  G W+   KVRK M+++ ++K    SW++V   V++F   D  HP+S 
Sbjct: 533 GNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSD 592

Query: 780 KIYEMLERLAM 790
           ++Y  ++ LA+
Sbjct: 593 EVYSTIDGLAL 603



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 247/529 (46%), Gaps = 58/529 (10%)

Query: 20  PPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
           P  QL QI +L        TP    RL           ARQ+FD I  P   +  + I  
Sbjct: 14  PINQLKQIQALIIIKYLSLTPLFIRRL---LNASFIQYARQVFDQIPHPDQGVHCSFITA 70

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           +   +L  EA+  +  M +++    C  +T   + K+CA    + +GK VH   IR   +
Sbjct: 71  YSRLSLNNEALRTFVSMHQNNVRIVC--FTIPPIFKSCASLLAIDVGKQVHSLVIRYGFH 128

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC-------------KVFDTM 186
            S F  N+L+N Y+       AE++    +  D   Y+ +              ++FD M
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKM 188

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
           R R++V+WN ++S Y +   Y +    F+ M      P+ I+   V    + LGD +   
Sbjct: 189 RDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLE--- 245

Query: 247 VVYGLLVKLGSEYVN---DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGG 303
              GL +K  ++  N   ++ V+++ + MY + G  D  R +FD+   R+   W+ MI G
Sbjct: 246 --MGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAG 303

Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI-----IK 358
           Y QN    EA+ELF + ++  +I  +DVT +S LSA +QL  ++ G+++ +Y+     I 
Sbjct: 304 YAQNGRSNEALELF-ENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLIS 362

Query: 359 N-FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
           N +VA  ++              + + + +RD V+WN+MI     NG  ++ + L   M+
Sbjct: 363 NVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK 422

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI-----HFEGMESYLIDMYAK 457
           +     +++T   L++A ++  + ++G +    +   H I     HF    + ++D++ +
Sbjct: 423 EIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHF----ACIVDLFCR 478

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           SG +  A +   + +  + +   W  +++    +  +E A +A +++LE
Sbjct: 479 SGRLIDAYEFICRMEV-EPNVVIWGTLLSASRIHLNVELAELAGKKLLE 526



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 36/240 (15%)

Query: 431 KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           KQ  A ++   I +  +    I     +  I+ ARQ+F++      DQ    + I  Y++
Sbjct: 19  KQIQALII---IKYLSLTPLFIRRLLNASFIQYARQVFDQ--IPHPDQGVHCSFITAYSR 73

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
             L  EA   F  M ++NV     TI  +  +C  +  I++GKQ+H   IRY    +VF 
Sbjct: 74  LSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFC 133

Query: 551 GTSLIDM-------------------------------YSKSGVINYAANVFAKIPEKNS 579
             +LI+                                YS+SG +  A  +F K+ +++ 
Sbjct: 134 QNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSI 193

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI  Y Q+G   +   +F+ M+    EP+ IT   VLS C+  G ++ GL+I  L
Sbjct: 194 VSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKL 253


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 211/634 (33%), Positives = 330/634 (52%), Gaps = 77/634 (12%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VFD M  + +V+WN++V+ Y +  R  EA   F  M       +T+S+           
Sbjct: 37  RVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM----PERNTVSW----------- 81

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                    GL+    S YV +  V+               ARK FD   ERN   W  M
Sbjct: 82  --------NGLI----SGYVKNRMVSE--------------ARKAFDTMPERNVVSWTAM 115

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI-IKN 359
           + GYVQ     EA  LF Q+ E +      V++   L  + Q++ +D  + L   + +K+
Sbjct: 116 VRGYVQEGLVSEAETLFWQMPEKNV-----VSWTVMLGGLIQVRRIDEARGLFDIMPVKD 170

Query: 360 FVALPVIV---------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            VA   ++                + +  R+V+SW TMIS +VQNG  D    L   M +
Sbjct: 171 VVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPE 230

Query: 405 QGFMIDSVTVTALLSA-ASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
           +    + V+ TA+L       R ++  +   A  ++  +    M    I  + ++G +  
Sbjct: 231 K----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAM----ILGFGQNGEVAK 282

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           ARQ+F++    ++D  TW+AMI  Y + G   EA   F  M    V  N  ++ SVL  C
Sbjct: 283 ARQVFDQIR--EKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVC 340

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             + +++ G+Q+H   ++   D +VFV + LI MY K G +  A  +F +   K+ V + 
Sbjct: 341 ASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWN 400

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           ++I GY QHG+ E AL +F  M   G+  D +TFV VLSACSY G V EGL+IF+ M+ +
Sbjct: 401 SIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSK 460

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y ++P TEHY C+ D+LGR G V +A + ++++  E + + IWG+LLG+CR H +  LAE
Sbjct: 461 YLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAI-IWGALLGACRTHMNMNLAE 519

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           V AKKLL+++ +N+ P  ++LLSNIYA +G W +V ++R+ MR + + K  GCSWI+V  
Sbjct: 520 VAAKKLLQLEPKNAGP--YILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEK 577

Query: 764 YVNRFASK-DQEHPQSHKIYEMLERLAMEMRNAG 796
            V+ F      +HP+   I +MLE+L   +R AG
Sbjct: 578 RVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAG 611



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 200/437 (45%), Gaps = 42/437 (9%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           +S I  YA +G  + AR++FD   ++    WN+M+ GY QNN P EA  LF ++ E + +
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
            ++ +                    +  Y+    V+      + + ER+VVSW  M+  +
Sbjct: 80  SWNGL--------------------ISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGY 119

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
           VQ GL  E   L ++M ++    + V+ T +L     +R  D  +     +    +    
Sbjct: 120 VQEGLVSEAETLFWQMPEK----NVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVV--- 172

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + +I  Y + G +  AR++F++     R+  +W  MI+GY QNG ++ A    R++ E
Sbjct: 173 ARTNMISGYCQEGRLAEARELFDEMPR--RNVISWTTMISGYVQNGQVDVA----RKLFE 226

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
                N V+  ++L      G IE   +L       +  + V    ++I  + ++G +  
Sbjct: 227 VMPEKNEVSWTAMLMGYTQGGRIEEASEL----FDAMPVKAVVACNAMILGFGQNGEVAK 282

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  VF +I EK+  T++ MI  Y + G    AL+LF  M+  G++ +  + ++VLS C+ 
Sbjct: 283 ARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCAS 342

Query: 627 AGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
              +D G Q+  +L++ ++           +  M  + G +V+A +       +  V+  
Sbjct: 343 LASLDHGRQVHAELVKSQFDSDVFVAS--VLITMYVKCGDLVKARQIFDRFSPKDIVM-- 398

Query: 686 WGSLLGSCRLHGHSELA 702
           W S++     HG  E A
Sbjct: 399 WNSIITGYAQHGLVEEA 415



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 184/417 (44%), Gaps = 50/417 (11%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYT 103
           +S  CQEGR   AR+LFD + R   + W T+I G+V N     A  L+  M  K    +T
Sbjct: 178 ISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWT 237

Query: 104 S-CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           +    YT    ++  +E  +    KAV    + C +    F  N                
Sbjct: 238 AMLMGYTQGGRIEEASELFDAMPVKAV----VACNAMILGFGQNG--------------- 278

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                  EV  ++     +VFD +R ++   W+ ++  Y +    VEA+  F +M R G+
Sbjct: 279 -------EVAKAR-----QVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGV 326

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           + +  S ++V    +SL        V+  LVK  S++ +D+FVAS  I MY + G    A
Sbjct: 327 QSNFPSLISVLSVCASLASLDHGRQVHAELVK--SQFDSDVFVASVLITMYVKCGDLVKA 384

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R+IFD    ++  +WN++I GY Q+    EA+++F ++     +  D VTF+  LSA S 
Sbjct: 385 RQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCS-SGMATDGVTFVGVLSACSY 443

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             ++  G ++   +   +          ++E     +  M+    + GL ++ + L+   
Sbjct: 444 TGKVKEGLEIFESMKSKY----------LVEPKTEHYACMVDLLGRAGLVNDAMDLI--- 490

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           QK     D++   ALL A     N ++ +     LL+      G    L ++YA  G
Sbjct: 491 QKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKG 547


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 210/688 (30%), Positives = 348/688 (50%), Gaps = 72/688 (10%)

Query: 130 HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
           HC  I+  +  S +  N++++ Y+ C                   +  +  K+FD   +R
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKC------------------GEIRIASKMFDETSQR 63

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           + V+WNT+++  V    +  A+   + M R G      SF ++   ++ +G  +    V+
Sbjct: 64  DAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVH 123

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
            ++VK+G  Y  ++F  S+ + MYA+    + A ++F +   RN+  WN +I GY     
Sbjct: 124 SMIVKIG--YEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGD 181

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A  L +  +EL+ +  DD TF   L+ +       L  Q+HA I+K+ +A    V N
Sbjct: 182 RGTAFWL-LDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCN 240

Query: 370 AVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           A+I                      RD+V+WN+M++A++ N  ++E   L  EMQ  GF 
Sbjct: 241 AIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFE 300

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKS--GLIKTAR 465
            D  T T+++SAA    +Q  GK  H  +++ G+ F   + + LI MY KS    +  A 
Sbjct: 301 PDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            IFE  +  ++D  +WN+++ G++Q+GL E+A   F  M    V  +    ++VL +C+ 
Sbjct: 361 NIFESLE--NKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSD 418

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  ++LG+Q+H                         GVI  A   F   P+ +S+ + ++
Sbjct: 419 LATLQLGQQVHVLC----------------------GVIEDARKSFDATPKDSSIAWNSL 456

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GY QHG  + AL LF  MK   ++ D ITFVAVL+ACS+ GLV+EG      M+ +Y 
Sbjct: 457 IFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYG 516

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I P  EHY C+ D+LGR G++ EA   ++ +  E + + +W +LLG+CR  G  ELA  V
Sbjct: 517 IPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAM-VWKTLLGACRTCGDIELASQV 575

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A  LLE++        +VLLS+++     W     +++ M+ERG++K  G SWI+V   V
Sbjct: 576 ASHLLELEPEEHCT--YVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEV 633

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMR 793
           + F ++D+ HP   +IY  L  L  E+R
Sbjct: 634 HSFNAEDRSHPNCEEIYLRLGDLMEEIR 661



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 165/668 (24%), Positives = 283/668 (42%), Gaps = 114/668 (17%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   + G   +A ++FD  ++   V WNT+I G V N   +E  L + +  K  
Sbjct: 36  TANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXV-NFGNFETALEFLKSMKRY 94

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
            + + D Y++ S+LK  A    + +G+ VH   ++     + F  ++LL+MY+ C    D
Sbjct: 95  GF-AVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVED 153

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                   +VF ++  RN V WN ++S Y        A      M   
Sbjct: 154 A------------------FEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELE 195

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
           G+     +F  +   L     +K    V+  +VK G    +D  V ++ I  Y+E G  +
Sbjct: 196 GVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHG--LASDTTVCNAIITAYSECGSIE 253

Query: 281 FARKIFDNCLE-RNTEVWNTMIGGYVQNNH--PVEAIELFVQVLELDEIVFDDVTFLSAL 337
            A ++FD  +E R+   WN+M+  Y+ NN       + L +QVL  +  ++   T+ S +
Sbjct: 254 DAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIY---TYTSVI 310

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------ERD 375
           SA  +      G+ LH  +IK  +   V + N++I                       +D
Sbjct: 311 SAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKD 370

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSWN++++ F Q+GL ++ L     M+ Q  +ID    +A+L + S+L    +G+Q H 
Sbjct: 371 HVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHV 430

Query: 436 YLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNGLL 494
                                  G+I+ AR+ F   D+  +D +  WN++I GY Q+G  
Sbjct: 431 L---------------------CGVIEDARKSF---DATPKDSSIAWNSLIFGYAQHGRG 466

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           + A   F  M +  V  + +T  +VL AC+ +G +E G                     L
Sbjct: 467 KIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF------------------L 508

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
             M S  G           IP +    Y  MI   G+ G  + A +L  +M     EPDA
Sbjct: 509 KSMESDYG-----------IPPRME-HYACMIDLLGRAGRLDEAKALIEAMP---FEPDA 553

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH--YCCVADMLGRVGKVVEAYEF 672
           + +  +L AC   G ++   Q+   + +   ++P  EH  Y  ++ M G + +  E    
Sbjct: 554 MVWKTLLGACRTCGDIELASQVASHLLE---LEPE-EHCTYVLLSSMFGHLRRWNEKASI 609

Query: 673 VKELGEEG 680
            + + E G
Sbjct: 610 KRLMKERG 617


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 210/712 (29%), Positives = 372/712 (52%), Gaps = 51/712 (7%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D++ Y ++L+ C +  +    KA+HC  ++  S    F  N LLN               
Sbjct: 48  DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLN--------------- 92

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
             YV+  + K  L   +FD M  RN V++ T+   Y   +     +  +  + R G   +
Sbjct: 93  -AYVKAGFDKDAL--NLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELN 145

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
              F +      SL   +    ++  +VKLG  Y ++ FV ++ I  Y+  G  D AR +
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLG--YDSNAFVGAALINAYSVCGSVDSARTV 203

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+  L ++  VW  ++  YV+N +  ++++L +  + +   + ++ TF +AL A   L  
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKL-LSCMRMAGFMPNNYTFDTALKASIGLGA 262

Query: 346 LDLGQQLHAYIIKN-FVALPVI-------------------VLNAVIERDVVSWNTMISA 385
            D  + +H  I+K  +V  P +                   V N + + DVV W+ MI+ 
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           F QNG  +E + L   M++   + +  T++++L+  +  +   +G+Q H  +++ G   +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + LID+YAK   + TA ++F +  S  +++ +WN +I GY   G   +AF  FR+ 
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSS--KNEVSWNTVIVGYENLGEGGKAFSMFREA 440

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
           L + V+   VT +S L AC  + +++LG Q+HG +I+    + V V  SLIDMY+K G I
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
            +A +VF ++   +  ++  +I GY  HG+  +AL +   MK    +P+ +TF+ VLS C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560

Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
           S AGL+D+G + F+ M +++ I+P  EHY C+  +LGR G++ +A + ++ +  E +V+ 
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM- 619

Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
           IW ++L +     + E A   A+++L+++ ++     +VL+SN+YA    W NV  +RK 
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDE--ATYVLVSNMYAGAKQWANVASIRKS 677

Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           M+E G++KE G SWI+  G V+ F+    +HP    I  MLE L M+   AG
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 38/407 (9%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           Q G    A ++F+ + +   V W+ +I  F  N    EA+ L+ +M+++  +   + +T 
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA--FVVPNEFTL 351

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS+L  CA  +   +G+ +H   ++   +   +V N+L+++Y+ C               
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC--------------- 396

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
               K D   K+F  +  +N V+WNT++  Y       +A   FR  LR  +  + ++F 
Sbjct: 397 ---EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           +   A +SL        V+GL +K  +     + V++S I MYA+ G   FA+ +F+   
Sbjct: 454 SALGACASLASMDLGVQVHGLAIK--TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
             +   WN +I GY  +    +A+ + + +++  +   + +TFL  LS  S    +D GQ
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRI-LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +    +I++    P +            +  M+    ++G  D+ + L+  +  +     
Sbjct: 571 ECFESMIRDHGIEPCL----------EHYTCMVRLLGRSGQLDKAMKLIEGIPYE----P 616

Query: 411 SVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
           SV +  A+LSA+ N  N++  +++   +L+     E     + +MYA
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 165/434 (38%), Positives = 267/434 (61%), Gaps = 10/434 (2%)

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
           ++ N + ERD VSW+ MI  FV+NG  +       E+ + G   D+ ++  ++ A  +  
Sbjct: 56  LLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115

Query: 426 NQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
              +G+  H+ +L++G+H +    S L+DMYAK G+I  A+Q+F++     +D  T   M
Sbjct: 116 GLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPK--KDLVTRTVM 173

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF--SIRY 542
           IAGY + G   E++V F QM      P+ V + +++ AC  +G +   + +H +  + RY
Sbjct: 174 IAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRY 233

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            LD  V +GT++IDMY+K G I+ +  +F ++ +KN ++++ MI  YG HG    AL LF
Sbjct: 234 SLD--VELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELF 291

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M   GI P+ ITF+++L ACS+AGLVD+GLQ+F LM   Y ++P  +HY C+ D+LGR
Sbjct: 292 HMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGR 351

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            G++ +A   ++ +  E +   IW + LG+CR+H   +LAE  AK LL + T+N  PG++
Sbjct: 352 AGRLDQALRLIENMEVEKDE-GIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQN--PGHY 408

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           +LLSNIYA  G W++V K+R  M +R L+K  G +WI+V   + RF + D  H +S++IY
Sbjct: 409 ILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIY 468

Query: 783 EMLERLAMEMRNAG 796
           EML+ L+ ++ +AG
Sbjct: 469 EMLKSLSQKLESAG 482



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 204/446 (45%), Gaps = 37/446 (8%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHL-ARQLFDSITRPTTVIWNTIIIGFV 81
           Q+ Q+H+       +    + ++L  +C + +  + A  LF+ +     V W+ +I GFV
Sbjct: 18  QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFV 77

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            N         + ++ ++   +  DN++   V+KAC +T  L +G+ +H   ++   +  
Sbjct: 78  KNGDYERCFQTFRELIRAG--SKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLD 135

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
            FV ++L++MY+ C         G+    +D +K     ++FD M ++++V    +++ Y
Sbjct: 136 NFVCSTLVDMYAKC---------GM----IDNAK-----QLFDRMPKKDLVTRTVMIAGY 177

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
            +  +  E+   F  M R G  P  ++ V +  A + LG    A +V+  +      Y  
Sbjct: 178 AECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVC--ARRYSL 235

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ + ++ I MYA+ G  D +R+IFD   ++N   W+ MIG Y  +    EA+ELF  +L
Sbjct: 236 DVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMML 295

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNT 381
               I+ + +TF+S L A S    +D G QL + +  ++   P          DV  +  
Sbjct: 296 N-SGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRP----------DVKHYTC 344

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+    + G  D+ L L+  M+ +    D     A L A    R  D+ ++    LL   
Sbjct: 345 MVDLLGRAGRLDQALRLIENMEVEK---DEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQ 401

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQI 467
               G    L ++YA +G  K   +I
Sbjct: 402 TQNPGHYILLSNIYANAGRWKDVAKI 427



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%)

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           NI   KQ+H       +  ++ V   L+ M +K   +  A  +F K+ E++ V+++ MI 
Sbjct: 15  NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIG 74

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           G+ ++G  ER    FR +   G +PD  +   V+ AC
Sbjct: 75  GFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKAC 111


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 184/530 (34%), Positives = 295/530 (55%), Gaps = 30/530 (5%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L + +  D +V ++ I MY   G    A  +F     R    WN +I G V+N +   A+
Sbjct: 135 LAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERAL 194

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
           E+F + +  D +  D  T +S L A +Q ++L+ G+ +H  +    +   V V NA+I+ 
Sbjct: 195 EVFGE-MAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDM 253

Query: 374 --------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSV 412
                               +DVVSW  MI A+V N    E + L  +M   G    + V
Sbjct: 254 YGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGV 313

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
           T+  LLSA +++ +    K THA  +R G+  +  +E+ LID YA+ G +K  R   E+ 
Sbjct: 314 TMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER- 372

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
             G     TWNA ++GYT +G  ++A   F++M+  +V P+  T+AS+LPA     +++ 
Sbjct: 373 --GSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKE 430

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           GK +H F +     ++  + T LID+YSK+G ++ A  +F  +PEK+ V +TT+I GYG 
Sbjct: 431 GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGI 490

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG +  A+ L+  M   G +P+ +T   +L ACS+AG++DEG+++F  M+  + + P+ E
Sbjct: 491 HGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGE 550

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY C+ DMLGR G++ EA+  ++++  E +   +WG+LLG+C LH + E  EV AK+L +
Sbjct: 551 HYSCLVDMLGRAGRIEEAHRLIQDMPFEPST-SVWGALLGACVLHKNVEFGEVAAKRLFQ 609

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           +D  N+  G +VLL NIYA    W +V  VR+ M ERGL KE G S ++ 
Sbjct: 610 LDPENT--GSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEA 657



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 259/569 (45%), Gaps = 65/569 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIW-NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           C  GRP  A  L   + +P  V + N+++  +       EA+ +YS M+      + D+ 
Sbjct: 56  CACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR------AFDHL 109

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+    KACA  R  R G+AVHC  +        +V N+L++MY +C     AE      
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE------ 163

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        VF  MR R VV+WN +++  VK      A+  F  M   G+     +
Sbjct: 164 ------------AVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRAT 211

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
            V+V PA +   D  +   V+ L+   G  +YV    V ++ I MY +    + AR++FD
Sbjct: 212 VVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVA---VKNALIDMYGKCRSLEDARRVFD 268

Query: 288 NCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +C  +++   W  MIG YV N+   EAI L  Q+L       + VT +  LSA + +   
Sbjct: 269 HCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSG 328

Query: 347 DLGQQLHAYII----KNFVALPVIVLNA------------VIERD---VVSWNTMISAFV 387
              +  HA  I    K+ +A+   +++A             +ER      +WN  +S + 
Sbjct: 329 KHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETWNAALSGYT 388

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEG 446
            +G + + + L   M  +    DS T+ ++L A +   +   GK  H +LL  G +    
Sbjct: 389 VSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTE 448

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + LID+Y+K+G +  A  +F+     ++D   W  +IAGY  +G    A + + +M+E
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLP--EKDVVAWTTIIAGYGIHGHARTAILLYDRMVE 506

Query: 507 HNVTPNVVTIASVLPACNPMGNIELG-------KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
               PN VTIA++L AC+  G I+ G       + +HG      L  N    + L+DM  
Sbjct: 507 SGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHG------LMPNGEHYSCLVDMLG 560

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++G I  A  +   +P + S +    +LG
Sbjct: 561 RAGRIEEAHRLIQDMPFEPSTSVWGALLG 589



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 10/213 (4%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           N+++  YT  G   EA   +  M   +H      +T      AC  +     G+ +H  +
Sbjct: 81  NSLLRSYTGLGCHREALAVYSAMRAFDH------LTFPFAAKACAGLRLGRHGRAVHCRA 134

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           +      + +V  +LI MY   G +  A  VF  +  +  V++  +I G  ++G +ERAL
Sbjct: 135 LAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERAL 194

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            +F  M   G+  D  T V+VL AC+ A  ++ G  +  L++ +  +         + DM
Sbjct: 195 EVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDK-GLGDYVAVKNALIDM 253

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
            G+   + +A         + +V+  W +++G+
Sbjct: 254 YGKCRSLEDARRVFDHCKHDKDVVS-WTAMIGA 285


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/544 (34%), Positives = 283/544 (52%), Gaps = 58/544 (10%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA L     ARK+FD   ERN  + N MI  YV N    E +++F  +   + +  D  T
Sbjct: 84  YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYT 142

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVI 372
           F   L A S    + +G+++H    K                     F++   +VL+ + 
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            RDVVSWN+++  + QN   D+ L +  EM+      D+ T+ +LL A SN   ++V   
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259

Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
                            Y+ DM+ K G                +   +WN MI  Y +N 
Sbjct: 260 ----------------MYVKDMFFKMG---------------KKSLVSWNVMIGVYMKNA 288

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           +  EA   + +M      P+ V+I SVLPAC     + LGK++HG+  R  L  N+ +  
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +LIDMY+K G +  A +VF  +  ++ V++T MI  YG  G    A++LF  ++  G+ P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D+I FV  L+ACS+AGL++EG   F LM   YKI P  EH  C+ D+LGR GKV EAY F
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           ++++  E N   +WG+LLG+CR+H  +++  + A KL ++    S  GY+VLLSNIYA+ 
Sbjct: 469 IQDMSMEPNE-RVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKA 525

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G WE V  +R  M+ +GL+K  G S ++V   ++ F   D+ HPQS +IY  L+ L  +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585

Query: 793 RNAG 796
           +  G
Sbjct: 586 KELG 589



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 238/528 (45%), Gaps = 63/528 (11%)

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVS 199
           R V++ ++     C SSL     G+K +    S  D+    KVFD +  RNV+  N ++ 
Sbjct: 59  RTVHSRIILEDLRCNSSL-----GVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            YV    Y E V+ F  M    +RP   +F  V  A S  G       ++G   K+G   
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG--L 171

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
            + LFV +  + MY + G    AR + D    R+   WN+++ GY QN    +A+E+  +
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV-CR 230

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSW 379
            +E  +I  D  T  S L AVS     ++      Y+   F  +         ++ +VSW
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENV-----MYVKDMFFKMG--------KKSLVSW 277

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N MI  +++N +  E + L   M+  GF  D+V++T++L A  +     +GK+ H Y+ R
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337

Query: 440 HG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
              I    +E+ LIDMYAK G ++ AR +FE   S  RD  +W AMI+ Y  +G   +A 
Sbjct: 338 KKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS--RDVVSWTAMISAYGFSGRGCDAV 395

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             F ++ +  + P+ +   + L AC+  G +E G+                    + D Y
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL---------------MTDHY 440

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
             +  + + A                M+   G+ G  + A   +R ++   +EP+   + 
Sbjct: 441 KITPRLEHLA---------------CMVDLLGRAGKVKEA---YRFIQDMSMEPNERVWG 482

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPS-TEHYCCVADMLGRVGK 665
           A+L AC      D GL   D +   +++ P  + +Y  ++++  + G+
Sbjct: 483 ALLGACRVHSDTDIGLLAADKL---FQLAPEQSGYYVLLSNIYAKAGR 527



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 206/452 (45%), Gaps = 79/452 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     +I N +I  +V N    E + ++  M   +     D+YT+  VLKAC
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN--VRPDHYTFPCVLKAC 150

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           + +  + IG+ +H    +   + + FV N L++MY  C    +A +              
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL-------------- 196

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               V D M RR+VV+WN++V  Y + +R+ +A+   R M  + I     +  ++ PA+S
Sbjct: 197 ----VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              +  + +V+          YV D+F              F   +K   +        W
Sbjct: 253 ---NTTTENVM----------YVKDMF--------------FKMGKKSLVS--------W 277

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MIG Y++N  PVEA+EL+ + +E D    D V+  S L A      L LG+++H YI 
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   +++ NA+I+                    RDVVSW  MISA+  +G   + + 
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  ++Q  G + DS+     L+A S+    + G+     +  H      +E  + ++D+ 
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++G +K A + F ++ S + ++  W A++  
Sbjct: 457 GRAGKVKEAYR-FIQDMSMEPNERVWGALLGA 487


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 196/577 (33%), Positives = 306/577 (53%), Gaps = 58/577 (10%)

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
           +G F  A+++FDN  + +    +T+I  +     P EAI L+   L    I   +  FL+
Sbjct: 79  VGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYAS-LRARGIKPHNSVFLT 137

Query: 336 ALSA------VSQLQELD-------------LGQQL-HAYIIKNFVALPVIVLNAVIERD 375
              A       S+++E+              LG  L HAY     V     V + ++ +D
Sbjct: 138 VAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKD 197

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           VVSW +M S +V  GL   GL +  EM   G   +SVT++++L A S L++   G+  H 
Sbjct: 198 VVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHG 257

Query: 436 YLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFE---------------------KNDS 473
           + +RHG I    + S L+ +YA+   +K AR +F+                     + D 
Sbjct: 258 FAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDK 317

Query: 474 G------------DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           G            + D+ATWNA+I G  +NG  E+A    R+M      PN +TI+S LP
Sbjct: 318 GLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLP 377

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC+ + ++ +GK++H +  R+ L  ++   T+L+ MY+K G +N + NVF  I  K+ V 
Sbjct: 378 ACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVA 437

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           + TMI+    HG     L LF SM   GI+P+++TF  VLS CS++ LV+EGLQIF+ M 
Sbjct: 438 WNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMG 497

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           +++ ++P   HY C+ D+  R G++ EAYEF++ +  E      WG+LLG+CR++ + EL
Sbjct: 498 RDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTA-SAWGALLGACRVYKNVEL 556

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           A++ A KL E++  N  PG +V L NI      W    + R  M+ERG+ K  GCSW+ V
Sbjct: 557 AKISANKLFEIEPNN--PGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQV 614

Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           G  V+ F   D+ + +S KIY  L+ L  +M++AG K
Sbjct: 615 GDRVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYK 651



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 237/542 (43%), Gaps = 86/542 (15%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE 88
           ++P +P      +  RL K     G    A+QLFD+I +P     +T+I  F    LP E
Sbjct: 56  VAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNE 115

Query: 89  AILLYSQMKKSS--PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           AI LY+ ++     P+    N  + +V KAC  + +    K VH   IRC      F+ N
Sbjct: 116 AIRLYASLRARGIKPH----NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGN 171

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           +L++ Y  C           K VE          +VFD +  ++VV+W ++ S YV    
Sbjct: 172 ALIHAYGKC-----------KCVEGAR-------RVFDDLVVKDVVSWTSMSSCYVNCGL 213

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
               +  F  M   G++P++++  ++ PA S L D KS   ++G  V+ G   + ++FV 
Sbjct: 214 PRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHG--MIENVFVC 271

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LE 322
           S+ + +YA       AR +FD    R+   WN ++  Y  N    + + LF Q+    +E
Sbjct: 272 SALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVE 331

Query: 323 LDEIVF------------------------------DDVTFLSALSAVSQLQELDLGQQL 352
            DE  +                              + +T  S L A S L+ L +G+++
Sbjct: 332 ADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEV 391

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H Y+ ++++   +  + A++                     +DVV+WNTMI A   +G  
Sbjct: 392 HCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNG 451

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
            E L+L   M + G   +SVT T +LS  S+ R  + G Q    + R  +       Y  
Sbjct: 452 REVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYAC 511

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           ++D+++++G +  A +  ++    +   + W A++        +E A ++  ++ E  + 
Sbjct: 512 MVDVFSRAGRLHEAYEFIQRMPM-EPTASAWGALLGACRVYKNVELAKISANKLFE--IE 568

Query: 511 PN 512
           PN
Sbjct: 569 PN 570



 Score = 44.3 bits (103), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 41/89 (46%)

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +G  L+      G    A  +F  IP+ +  T +T+I  +   G+   A+ L+ S++  G
Sbjct: 68  LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFD 638
           I+P    F+ V  AC  +G      ++ D
Sbjct: 128 IKPHNSVFLTVAKACGASGDASRVKEVHD 156


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 202/552 (36%), Positives = 304/552 (55%), Gaps = 37/552 (6%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA+      AR++FD   + +T  +NT+I GY      V A+ LF ++ EL   V  D  
Sbjct: 84  YAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEV--DGF 141

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------- 373
            LS L A      +DL +QLH + +         V NA +                    
Sbjct: 142 TLSGLIAAC-CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200

Query: 374 --RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             RD VSWN+MI A+ Q+    + L L  EM  +GF ID  T+ ++L+A ++L +   G+
Sbjct: 201 GLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGL---IKTARQIFEKNDSGDRDQATWNAMIAG 487
           Q H  L++ G H    + S LID Y+K G    +  + ++F++  S   D   WN MI+G
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS--PDLVLWNTMISG 318

Query: 488 YTQNG-LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ 546
           Y+ N    EEA  +FRQM      P+  +   V  AC+ + +   GKQ+HG +I+  +  
Sbjct: 319 YSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPS 378

Query: 547 N-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
           N + V  +LI +Y KSG +  A  VF ++PE N+V++  MI GY QHG    AL L++ M
Sbjct: 379 NRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRM 438

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
              GI P+ ITFVA+LSAC++ G VDEG + F+ M++ +KI+P  EHY C+ D+LGR GK
Sbjct: 439 LDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498

Query: 666 VVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           + EA  F+  +  + G+V   W +LLG+CR H +  LAE  AK+L+ M    + P  +V+
Sbjct: 499 LEEAERFIDAMPYKPGSV--AWAALLGACRKHKNMALAERAAKELMVMQPLAATP--YVM 554

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           L+N+YA+ G WE +  VRK MR + +RK+ GCSWI+V    + F ++D  HP   ++ E 
Sbjct: 555 LANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEY 614

Query: 785 LERLAMEMRNAG 796
           LE +  +M+  G
Sbjct: 615 LEEMMKKMKKVG 626



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 237/533 (44%), Gaps = 57/533 (10%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST--CLSSLDAEM------- 163
           +LK+ AE R+L  GK++H  +++     S ++ N  +N+YS   CLS   A         
Sbjct: 15  LLKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73

Query: 164 -----VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                V +K    D SK  +  ++FD   + + V++NT++S Y      V A+  F+ M 
Sbjct: 74  VFSYNVIVKAYAKD-SKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS-EYVNDLFVASSAIFMYAELG 277
            +G      +   +  A     D       + +     S   VN+ FV       Y++ G
Sbjct: 133 ELGFEVDGFTLSGLIAACCDRVDLIKQLHCFAVSGGFDSYSSVNNAFVT-----YYSKGG 187

Query: 278 CFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
               A  +F        EV WN+MI  Y Q+    +A+ L+ +++       D  T  S 
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLASV 246

Query: 337 LSAVSQLQELDLGQQLHAYIIK------NFVALPVI-----------------VLNAVIE 373
           L+A++ L  L  G+Q H  +IK      + V   +I                 V   ++ 
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306

Query: 374 RDVVSWNTMISAFVQN-GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            D+V WNTMIS +  N    +E +    +MQ+ G   D  +   + SA SNL +   GKQ
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQ 366

Query: 433 THAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
            H   ++  I      + + LI +Y KSG +  AR++F++    + +  ++N MI GY Q
Sbjct: 367 IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMP--ELNAVSFNCMIKGYAQ 424

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVF 549
           +G   EA   +++ML+  + PN +T  ++L AC   G ++ G K  +     + ++    
Sbjct: 425 HGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAE 484

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQH---GMSERA 598
             + +ID+  ++G +  A      +P K  SV +  ++    +H    ++ERA
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERA 537



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 53/447 (11%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           ++ + H+ARQLFD   +P TV +NT+I G+        A++L+ +M++       D +T 
Sbjct: 86  KDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELG--FEVDGFTL 143

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S ++ AC +  +L   K +HC  +    +    V N+ +  YS     L  E V + Y  
Sbjct: 144 SGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSK--GGLLREAVSVFY-- 197

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                        D +  R+ V+WN+++  Y + +   +A+  ++ M+  G +    +  
Sbjct: 198 -----------GMDGL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLA 244

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF---ARKIFD 287
           +V  AL+SL         +G L+K G  +  +  V S  I  Y++ G  D    + K+F 
Sbjct: 245 SVLNALTSLDHLIGGRQFHGKLIKAG--FHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQ 302

Query: 288 NCLERNTEVWNTMIGGYVQN-NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
             L  +  +WNTMI GY  N  H  EA++ F Q+  +     DD +F+   SA S L   
Sbjct: 303 EILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRP-DDCSFVCVTSACSNLSSP 361

Query: 347 DLGQQLHAYIIK-NFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
             G+Q+H   IK N  +  + V NA+I                    E + VS+N MI  
Sbjct: 362 SQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKG 421

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + Q+G   E L L   M   G   +++T  A+LSA ++    D G Q +   ++     E
Sbjct: 422 YAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG-QKYFNTMKETFKIE 480

Query: 446 -GMESY--LIDMYAKSGLIKTARQIFE 469
              E Y  +ID+  ++G ++ A +  +
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFID 507



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 33/369 (8%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V WN++I+ +  +    +A+ LY +M         D +T +SVL A     +L  G+  H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKG--FKIDMFTLASVLNALTSLDHLIGGRQFH 263

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
              I+   + +  V + L++ YS C         G+   E          KVF  +   +
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKC-----GGRDGMSDSE----------KVFQEILSPD 308

Query: 191 VVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +V WNT++S Y   E + E AV+ FR M R+G RP   SFV V  A S+L        ++
Sbjct: 309 LVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIH 368

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           GL +K  +   N + V ++ I +Y + G    AR++FD   E N   +N MI GY Q+ H
Sbjct: 369 GLAIK-SNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGH 427

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ L+ ++L+   I  +++TF++ LSA +   ++D GQ+    + + F         
Sbjct: 428 GTEALRLYQRMLD-SGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETF--------- 477

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
             IE +   ++ MI    + G  +E    +  M    +   SV   ALL A    +N  +
Sbjct: 478 -KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP---YKPGSVAWAALLGACRKHKNMAL 533

Query: 430 GKQTHAYLL 438
            ++    L+
Sbjct: 534 AERAAKELM 542



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           NVF    ++  Y+K   I+ A  +F + P+ ++V+Y T+I GY     +  A+ LF+ M+
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMR 132

Query: 607 GCGIEPDAITFVAVLSAC 624
             G E D  T   +++AC
Sbjct: 133 ELGFEVDGFTLSGLIAAC 150



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 21  PPQLPQIHSLS--PPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P Q  QIH L+    IP  +     + +S   + G    AR++FD +     V +N +I 
Sbjct: 361 PSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIK 420

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           G+  +    EA+ LY +M  S    + +N T+ ++L ACA    +  G+
Sbjct: 421 GYAQHGHGTEALRLYQRMLDSG--IAPNNITFVAILSACAHCGKVDEGQ 467


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/544 (34%), Positives = 283/544 (52%), Gaps = 58/544 (10%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA L     ARK+FD   ERN  + N MI  YV N    E +++F  +   + +  D  T
Sbjct: 84  YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYT 142

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVI 372
           F   L A S    + +G+++H    K                     F++   +VL+ + 
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            RDVVSWN+++  + QN   D+ L +  EM+      D+ T+ +LL A SN   ++V   
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259

Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
                            Y+ DM+ K G                +   +WN MI  Y +N 
Sbjct: 260 ----------------MYVKDMFFKMG---------------KKSLVSWNVMIGVYMKNA 288

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           +  EA   + +M      P+ V+I SVLPAC     + LGK++HG+  R  L  N+ +  
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +LIDMY+K G +  A +VF  +  ++ V++T MI  YG  G    A++LF  ++  G+ P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D+I FV  L+ACS+AGL++EG   F LM   YKI P  EH  C+ D+LGR GKV EAY F
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           ++++  E N   +WG+LLG+CR+H  +++  + A KL ++    S  GY+VLLSNIYA+ 
Sbjct: 469 IQDMSMEPNE-RVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKA 525

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G WE V  +R  M+ +GL+K  G S ++V   ++ F   D+ HPQS +IY  L+ L  +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585

Query: 793 RNAG 796
           +  G
Sbjct: 586 KELG 589



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 56/487 (11%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD +  RNV+  N ++  YV    Y E V+ F  M    +RP   +F  V  A S  G
Sbjct: 95  KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
                  ++G   K+G    + LFV +  + MY + G    AR + D    R+   WN++
Sbjct: 155 TIVIGRKIHGSATKVG--LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + GY QN    +A+E+  + +E  +I  D  T  S L AVS     ++      Y+   F
Sbjct: 213 VVGYAQNQRFDDALEV-CREMESVKISHDAGTMASLLPAVSNTTTENV-----MYVKDMF 266

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
             +         ++ +VSWN MI  +++N +  E + L   M+  GF  D+V++T++L A
Sbjct: 267 FKMG--------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318

Query: 421 ASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
             +     +GK+ H Y+ R   I    +E+ LIDMYAK G ++ AR +FE   S  RD  
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS--RDVV 376

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +W AMI+ Y  +G   +A   F ++ +  + P+ +   + L AC+  G +E G+      
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL- 435

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
                         + D Y  +  + + A                M+   G+ G  + A 
Sbjct: 436 --------------MTDHYKITPRLEHLA---------------CMVDLLGRAGKVKEA- 465

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP-STEHYCCVAD 658
             +R ++   +EP+   + A+L AC      D GL   D +   +++ P  + +Y  +++
Sbjct: 466 --YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL---FQLAPEQSGYYVLLSN 520

Query: 659 MLGRVGK 665
           +  + G+
Sbjct: 521 IYAKAGR 527



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 206/452 (45%), Gaps = 79/452 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD I     +I N +I  +V N    E + ++  M   +     D+YT+  VLKAC
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN--VRPDHYTFPCVLKAC 150

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           + +  + IG+ +H    +   + + FV N L++MY  C    +A +              
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL-------------- 196

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               V D M RR+VV+WN++V  Y + +R+ +A+   R M  + I     +  ++ PA+S
Sbjct: 197 ----VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              +  + +V+          YV D+F              F   +K   +        W
Sbjct: 253 ---NTTTENVM----------YVKDMF--------------FKMGKKSLVS--------W 277

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MIG Y++N  PVEA+EL+ + +E D    D V+  S L A      L LG+++H YI 
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   +++ NA+I+                    RDVVSW  MISA+  +G   + + 
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
           L  ++Q  G + DS+     L+A S+    + G+     +  H      +E  + ++D+ 
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++G +K A + F ++ S + ++  W A++  
Sbjct: 457 GRAGKVKEAYR-FIQDMSMEPNERVWGALLGA 487



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +I   + +H   I   L  N  +G  L+  Y+    +  A  VF +IPE+N +    MI 
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            Y  +G     + +F +M GC + PD  TF  VL ACS +G +  G +I        K+ 
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG---SATKVG 170

Query: 648 PSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            S+  +    +  M G+ G + EA   + E+     V   W SL+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV--SWNSLV 213


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 205/626 (32%), Positives = 337/626 (53%), Gaps = 60/626 (9%)

Query: 181 KVFDT--MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
           KVFD   + +R + +WN +VS Y ++ +  +A+  F  M     + +T+SF  +      
Sbjct: 40  KVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM----PQRNTVSFNGMISGYVK 95

Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
            G    A  V+ ++ +       ++   +S +  Y + G  + A K+F     RN   W 
Sbjct: 96  NGMVADARKVFDVMPE------RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWT 149

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
            MIGG ++ +   +A +LF  + E D +V  ++     +    Q+  LD  ++L      
Sbjct: 150 VMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNM-----IGGYCQVGRLDEAREL------ 198

Query: 359 NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
            F  + V        R+V +W TM+S + +NG  D    L   M ++    + V+ TA+L
Sbjct: 199 -FDEMKV--------RNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAML 245

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKTARQIFEKN 471
              +       G+   A+ L     FE M        + +I  +  +G +  AR +FE  
Sbjct: 246 MGYTQ-----SGRMKEAFEL-----FEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGM 295

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
              +RD+ TWNAMI  + + GL  EA   F +M    V  N  ++ SVL  C  + +++ 
Sbjct: 296 K--ERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDH 353

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+Q+H   +R   DQ+++V + LI MY K G +  A  +F +   K+ V + +MI GY Q
Sbjct: 354 GRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQ 413

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG+ E AL++F  M   G++PD +TF+ VLSACSY+G V EG +IF+ M+  Y+++P  E
Sbjct: 414 HGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIE 473

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY C+ D+LGR G+V EA E V+++  E + + +WG+LLG+CR H   +LAEV  +KL +
Sbjct: 474 HYACMVDLLGRAGRVDEAMELVEKMPMEPDAI-VWGALLGACRNHMKLDLAEVAVEKLAK 532

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           ++ +N+ P  +VLLS++YA +G W +V+ +RK++  R + K  GCSWI+V   V+ F   
Sbjct: 533 LEPKNAGP--YVLLSHMYATKGRWRDVEVLRKKINRRVI-KFPGCSWIEVEKKVHMFTGG 589

Query: 772 D-QEHPQSHKIYEMLERLAMEMRNAG 796
           D + HP+ H I +MLE+L+  +R AG
Sbjct: 590 DSKSHPEQHMITQMLEKLSGFLREAG 615



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 172/373 (46%), Gaps = 41/373 (10%)

Query: 267 SSAIFMYAELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           +SAI  Y  +G    ARK+FDN    +R    WN M+  Y +++ P +A+ LF Q+ + +
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
            + F+ +                    +  Y+    VA    V + + ER+VVSW +M+ 
Sbjct: 83  TVSFNGM--------------------ISGYVKNGMVADARKVFDVMPERNVVSWTSMVR 122

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
            +VQ G+ +E   L +EM ++  +  +V +  LL  +   R  D  K       +  +  
Sbjct: 123 GYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKES---RIDDAKKLFDMIPEKDVVVV 179

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             M    I  Y + G +  AR++F++     R+  TW  M++GY +NG ++ A   F  M
Sbjct: 180 TNM----IGGYCQVGRLDEARELFDEMKV--RNVFTWTTMVSGYAKNGRVDVARKLFEVM 233

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-LIDMYSKSGV 563
            E     N V+  ++L     MG  + G+    F +   +     V  + +I  +  +G 
Sbjct: 234 PER----NEVSWTAML-----MGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGE 284

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ A  +F  + E++  T+  MI  + + G+   AL LF  M+  G+  +  + ++VLS 
Sbjct: 285 MHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSV 344

Query: 624 CSYAGLVDEGLQI 636
           C+    +D G Q+
Sbjct: 345 CASLASLDHGRQV 357



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 118/511 (23%), Positives = 216/511 (42%), Gaps = 75/511 (14%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
           +P+  T +    +S   + G    AR++FD +     V W +++ G+V   +  EA  L+
Sbjct: 78  MPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLF 137

Query: 94  SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
            +M + +          S  +      +  RI  A                   L +M  
Sbjct: 138 WEMPRRN--------VVSWTVMIGGLLKESRIDDA-----------------KKLFDMIP 172

Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                +   M+G  Y +V   + D   ++FD M+ RNV  W T+VS Y K  R   A + 
Sbjct: 173 EKDVVVVTNMIG-GYCQV--GRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKL 229

Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
           F +M       + +S+  +    +  G  K A  ++  +       V  +   +  I  +
Sbjct: 230 FEVM----PERNEVSWTAMLMGYTQSGRMKEAFELFEAMP------VKWIVACNEMILQF 279

Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
              G    AR +F+   ER+   WN MI  + +    +EA+ LF + ++ + +  +  + 
Sbjct: 280 GLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFAR-MQREGVALNFPSM 338

Query: 334 LSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIE 373
           +S LS  + L  LD G+Q+HA ++++      +VA  +I              + N  + 
Sbjct: 339 ISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLF 398

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           +DVV WN+MI+ + Q+GL +E L + ++M   G   D VT   +LSA S       GK  
Sbjct: 399 KDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSY-----SGKVK 453

Query: 434 HAYLLRHGIHFE-----GMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             + +   +        G+E Y  ++D+  ++G +  A ++ EK    + D   W A++ 
Sbjct: 454 EGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPM-EPDAIVWGALLG 512

Query: 487 GYTQNGLLEEAFVAFRQMLE---HNVTPNVV 514
               +  L+ A VA  ++ +    N  P V+
Sbjct: 513 ACRNHMKLDLAEVAVEKLAKLEPKNAGPYVL 543



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 63/286 (22%)

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           I  Y + G I  AR++F+      R  A+WNAM++ Y ++    +A + F QM + N   
Sbjct: 26  ISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVS 85

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
                                                F G  +I  Y K+G++  A  VF
Sbjct: 86  -------------------------------------FNG--MISGYVKNGMVADARKVF 106

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             +PE+N V++T+M+ GY Q GM E A  LF  M       + +++  ++        +D
Sbjct: 107 DVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP----RRNVVSWTVMIGGLLKESRID 162

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLG---RVGKVVEAYEFVKELGEEGNVLEIWGS 688
           +  ++FD++ ++  +         V +M+G   +VG++ EA E   E+ +  NV   W +
Sbjct: 163 DAKKLFDMIPEKDVV--------VVTNMIGGYCQVGRLDEARELFDEM-KVRNVF-TWTT 212

Query: 689 LLGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNIYAEEG 733
           ++     +G  +    VA+KL E M  RN +    +L+   Y + G
Sbjct: 213 MVSGYAKNGRVD----VARKLFEVMPERNEVSWTAMLMG--YTQSG 252


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/543 (33%), Positives = 300/543 (55%), Gaps = 28/543 (5%)

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
             G  ++A K F    E +  +WN +I GY Q N     I +++  +++ ++  +  TFL
Sbjct: 31  HFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMD-MQISQVHPNCFTFL 89

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ER 374
             L A        +G+Q+H    K      V V N+++                    +R
Sbjct: 90  YVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDR 149

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            VVSW ++IS +VQNG   E L +  EM++     D + + ++++A +N+ +   GK  H
Sbjct: 150 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 209

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
             + + G+ FE  +   L  MYAK GL++ AR  F + +    +   WNAMI+GY  NG 
Sbjct: 210 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK--PNLILWNAMISGYANNGY 267

Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
            EEA   FR+M+  N+  + +T+ S + A   +G++EL + L G+  +     + FV T 
Sbjct: 268 GEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTG 327

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
           LIDMY+K G I  A  VF ++ +K+ V ++ MI+GYG HG  + A+ L+  MK  G+ P+
Sbjct: 328 LIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPN 387

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
             TF+ +L+AC  +GLV EG ++F LM  ++ I+P  +HY CV D+LGR G + +AY+F+
Sbjct: 388 DGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFI 446

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
             +  +  V  +WG+LL +C++H    L E+ A++L  +D  N+  G++V LSN+YA   
Sbjct: 447 MSMPIKPGV-SVWGALLSACKIHRKVRLGEIAAEQLFILDPYNT--GHYVQLSNLYASAH 503

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W  V  VR  M ++GL K++G S I++ G +  F   D+ HP+S +I+E L+RL   ++
Sbjct: 504 LWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLK 563

Query: 794 NAG 796
            AG
Sbjct: 564 AAG 566



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 212/433 (48%), Gaps = 44/433 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  + A + F  ++ P  ++WN II G+   N+    I +Y  M+ S  + +C  +T+  
Sbjct: 33  GDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC--FTFLY 90

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VLKAC  T    IGK +H    +     + FV NSL++MY+             K+ ++ 
Sbjct: 91  VLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYA-------------KFGQIS 137

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y++      VFD +  R VV+W +I+S YV+    +EA+  F+ M +  ++P  I+ V+V
Sbjct: 138 YARI-----VFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSV 192

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +++ D      ++GL+ KLG E+  D+ ++ +   MYA+ G  + AR  F+   + 
Sbjct: 193 MTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTT--MYAKRGLVEVARFFFNRMEKP 250

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N  +WN MI GY  N +  EAI+LF +++    I  D +T  SA+ A +Q+  L+L + L
Sbjct: 251 NLILWNAMISGYANNGYGEEAIKLFREMIT-KNIRVDSITMRSAVLASAQVGSLELARWL 309

Query: 353 HAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
             YI K+      FV   +I              V + V ++DVV W+ MI  +  +G  
Sbjct: 310 DGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHG 369

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYL 451
            E + L  EM++ G   +  T   LL+A  N      G +    +  HGI       S +
Sbjct: 370 QEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCV 429

Query: 452 IDMYAKSGLIKTA 464
           +D+  ++G +  A
Sbjct: 430 VDLLGRAGYLNQA 442



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 143/296 (48%), Gaps = 23/296 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S   + G+   AR +FD +   T V W +II G+V N  P EA+ ++ +M++ +   
Sbjct: 125 SLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCN--V 182

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D     SV+ A     +L  GK++H    +        +  SL  MY+          
Sbjct: 183 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA---------- 232

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K   V+ +++      F+ M + N++ WN ++S Y       EA++ FR M+   IR
Sbjct: 233 ---KRGLVEVARF-----FFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 284

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
             +I+  +   A + +G  + A  + G + K  SEY +D FV +  I MYA+ G    AR
Sbjct: 285 VDSITMRSAVLASAQVGSLELARWLDGYISK--SEYRDDTFVNTGLIDMYAKCGSIYLAR 342

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
            +FD   +++  +W+ MI GY  + H  EAI L+ ++ +   +  +D TF+  L+A
Sbjct: 343 CVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG-VCPNDGTFIGLLTA 397


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 312/630 (49%), Gaps = 88/630 (13%)

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV--YGLLVKLGSE 258
           + K   +   +R F  ML  GI P +     V    ++L   ++   +  + L+  LG +
Sbjct: 49  FSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLD 108

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
            V    V SS + MY +      AR +FD   +      + +I  + +     E  ELF 
Sbjct: 109 SV----VLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFY 164

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVS 378
           Q                           DLG                      +E ++VS
Sbjct: 165 QTR-------------------------DLG----------------------VELNLVS 177

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           WN MIS F ++G   + +++   M  +G   D  +V+++L A  +L    +G Q H Y++
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237

Query: 439 RHGIHFEG-MESYLIDMYAK-------------------------------SGLIKTARQ 466
           + G+  +  + S LIDMY K                               +GL+  A +
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F++    D +  +W +MIA  +QNG   EA   FR+M    V PN VTI  +LPAC  +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
             +  GK  H FS+R  +  +V+VG++LIDMY+K G +  +   F  +P +N V++ +++
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            GY  HG +  A+++F  M+ CG +PD ++F  VLSAC+  GL +EG   FD M + + +
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           +   EHY C+  +LGR G++ EAY  +K++  E +   +WG+LL SCR+H   +L E+ A
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSC-VWGALLSSCRVHNRVDLGEIAA 536

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           K++ E++ RN  PG ++LLSNIYA +  W  VD VR  MR RGL+K  G SWI++   V+
Sbjct: 537 KRVFELEPRN--PGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVH 594

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              + D  HPQ  +I E L +L +EM+ +G
Sbjct: 595 MLLAGDSSHPQMPQIIEKLAKLTVEMKKSG 624



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 188/417 (45%), Gaps = 37/417 (8%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLF----DSITRPTTVIWNTIIIGFVCNNLPYEA 89
           +P+    T  + +S+  ++GR    ++LF    D       V WN +I GF  +    +A
Sbjct: 135 LPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDA 194

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           +L++  M         D  + SSVL A  +     +G  +HC+ I+    P +FV ++L+
Sbjct: 195 VLMFQNMHLEG--LKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALI 252

Query: 150 NMYSTCLSSLDAEMVGLKYVEVD----------YSKYDLVCKVFDTMRR-----RNVVAW 194
           +MY  C  + +   V  +  EVD           S+  LV    +  ++      NVV+W
Sbjct: 253 DMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSW 312

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            ++++   +  + +EA+  FR M   G++P++++   + PA  ++         +   ++
Sbjct: 313 TSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLR 372

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G    ND++V S+ I MYA+ G    +R  FD    RN   WN+++ GY  +    EAI
Sbjct: 373 NG--IFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAI 430

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER 374
            +F ++++      D V+F   LSA +Q    + G          +     +  N  +E 
Sbjct: 431 NIF-ELMQRCGQKPDHVSFTCVLSACTQGGLTEEG----------WFYFDSMSRNHGVEA 479

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
            +  ++ M++   ++G  +E   ++ +M    F  DS    ALLS+       D+G+
Sbjct: 480 RMEHYSCMVTLLGRSGRLEEAYAMIKQMP---FEPDSCVWGALLSSCRVHNRVDLGE 533



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 162/353 (45%), Gaps = 53/353 (15%)

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           Q HA+I+K  ++LP  +    I   +  +  +I  F               M  QG + D
Sbjct: 30  QAHAHILKTGISLPETI---QIFSKLNHFGHVIRVFSY-------------MLTQGIVPD 73

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM----------------------- 447
           S  +  ++   + L     GKQ H + L  G+  + +                       
Sbjct: 74  SRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFD 133

Query: 448 ---------ESYLIDMYAKSGLIKTARQIF-EKNDSG-DRDQATWNAMIAGYTQNGLLEE 496
                     S LI  +A+ G +K  +++F +  D G + +  +WN MI+G+ ++G   +
Sbjct: 134 KLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLD 193

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLID 556
           A + F+ M    + P+  +++SVLPA   +    +G Q+H + I+  L  + FV ++LID
Sbjct: 194 AVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALID 253

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           MY K    +  + VF ++ E +      ++ G  ++G+ + AL +F+  K  G++ + ++
Sbjct: 254 MYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFK--GMDLNVVS 311

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           + +++++CS  G   E L++F  MQ E  ++P++    C+    G +  ++  
Sbjct: 312 WTSMIASCSQNGKDMEALELFREMQIE-GVKPNSVTIPCLLPACGNIAALLHG 363



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 198/474 (41%), Gaps = 78/474 (16%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV- 164
           D+    +V+K CA    L+ GK +HC  +         V +SLL+MY       DA  V 
Sbjct: 73  DSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVF 132

Query: 165 ------GLKYVEVDYSKY----------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
                 G+       S++          +L  +  D     N+V+WN ++S + ++  Y+
Sbjct: 133 DKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYL 192

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           +AV  F+ M   G++P   S  +V PA+  L        ++  ++K G     D FV S+
Sbjct: 193 DAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQG--LGPDKFVVSA 250

Query: 269 AIFMYAELGCFDFARKIF------------------------DNCLE---------RNTE 295
            I MY +  C      +F                        DN LE          N  
Sbjct: 251 LIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVV 310

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W +MI    QN   +EA+ELF + ++++ +  + VT    L A   +  L  G+  H +
Sbjct: 311 SWTSMIASCSQNGKDMEALELFRE-MQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCF 369

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
            ++N +   V V +A+I+                    R++VSWN++++ +  +G   E 
Sbjct: 370 SLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEA 429

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LI 452
           + +   MQ+ G   D V+ T +LSA +     + G      + R HG+    ME Y  ++
Sbjct: 430 INIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEAR-MEHYSCMV 488

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            +  +SG ++ A  +  K    + D   W A+++    +  ++   +A +++ E
Sbjct: 489 TLLGRSGRLEEAYAMI-KQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFE 541


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 204/600 (34%), Positives = 328/600 (54%), Gaps = 53/600 (8%)

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           + S  +++  +VK GS    D F++S  + +YA+ G  + A+++FD+   RN   W  ++
Sbjct: 89  FSSTQIIHCHIVKTGSH--EDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLM 146

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
            GYVQN+ P  AI LF ++L   E    + T   AL+A + L  L LG+QLHAYIIK  V
Sbjct: 147 KGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHV 206

Query: 362 ALPVIVLNA---------------------VIERDVVSWNTMISAFVQNGLDDEGL---- 396
                + NA                     + E+DV+SW   ISA  + G   +G+    
Sbjct: 207 DFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFV 266

Query: 397 -MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLI 452
            ML+ E+Q Q    +  T+T+ LS    ++  ++G Q HA   + G  +E    + + L+
Sbjct: 267 EMLLDEVQVQP---NEYTLTSALSQCCEVKCLELGIQVHALCTKLG--YESNLRVRNSLL 321

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE-----------EAFVAF 501
            +Y K G I  A+++F+  +  D +  TWNAMIAG+ Q   L            EA   F
Sbjct: 322 YLYLKCGCIVEAQRLFKGMN--DVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLF 379

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
            ++    + P+  T +SVL  C+ M  +E G+Q+H  +I+     +V VG+S+I+MY+K 
Sbjct: 380 SKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKC 439

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G I  A+ VF ++  +  + +TTMI G+ QHG S++AL+LF  MK  GI P+ +TFV VL
Sbjct: 440 GSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVL 499

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           SAC  AG+V+E    F++MQ+EYKI+P  +HY C+ DML R+G+V EA++ +K++  + +
Sbjct: 500 SACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKAS 559

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
              IW +L+  C   G+ EL    A+KLL +  +++   Y +LL N Y   G +++V +V
Sbjct: 560 EF-IWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDT-ETYKLLL-NAYVSAGRYDDVSRV 616

Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQ 801
              MRE  + +    SWI +   V  F + D+   +S  I + LE L ++ +N G + ++
Sbjct: 617 ENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIES-SIGKSLEDLHIKAKNLGYEMLE 675



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 139/585 (23%), Positives = 260/585 (44%), Gaps = 80/585 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D+  Y  +L+ C E  +    + +HCH ++  S+   F+ + L+ +Y+ C          
Sbjct: 72  DSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKC---------- 121

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRP 224
                    + +   +VFD M RRN VAW  ++  YV+      A+  F  M+L     P
Sbjct: 122 --------GRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYP 173

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-FDFAR 283
           S  +      A +SL   K  + ++  ++K   ++  D  + ++   +Y + G   +   
Sbjct: 174 SNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDF--DTSIGNALCSLYTKCGGKLEVGL 231

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVS 341
             F    E++   W   I    +    ++ + +FV++L LDE+    ++ T  SALS   
Sbjct: 232 TAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEML-LDEVQVQPNEYTLTSALSQCC 290

Query: 342 QLQELDLGQQLHAYI----------IKNFVALPVIVLNAVIER----------DVVSWNT 381
           +++ L+LG Q+HA            ++N +    +    ++E           ++V+WN 
Sbjct: 291 EVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNA 350

Query: 382 MISAFV-------------QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
           MI+                Q G+  E L L  ++ + G   D  T +++LS  S +   +
Sbjct: 351 MIAGHAQMMELSKDNLSAYQKGI--EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALE 408

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            G+Q HA  ++ G   +  + S +I+MY K G I+ A ++F   +   R    W  MI G
Sbjct: 409 QGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFL--EMSIRTMILWTTMITG 466

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-------ELGKQLHGFSI 540
           + Q+G  ++A   F  M    + PN+VT   VL AC   G +       E+ ++   + I
Sbjct: 467 FAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQK--EYKI 524

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERAL 599
           + ++D  V     L+DM  + G +  A ++  K+  K S   ++ +I+G    G  E  L
Sbjct: 525 KPVMDHYV----CLVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLE--L 578

Query: 600 SLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
               + K   ++P D  T+  +L+A   AG  D+  ++ ++M++E
Sbjct: 579 GCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMREE 623



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 224/492 (45%), Gaps = 65/492 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM-KKSSPYTSCDNYTYS 111
           GR   A+Q+FD + R   V W  ++ G+V N++P  AI L+ +M   S  Y S  NYT +
Sbjct: 122 GRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPS--NYTLA 179

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
             L AC    +L++G+ +H + I+   +    + N+L ++Y+ C   L+   VGL     
Sbjct: 180 IALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLE---VGL----- 231

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMGIRPSTISF 229
                      F  ++ ++V++W   +S   +    ++ VR F  ML   + ++P+  + 
Sbjct: 232 ---------TAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTL 282

Query: 230 VNVFPALSSLGDYKSADV---VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +   ALS   + K  ++   V+ L  KLG  Y ++L V +S +++Y + GC   A+++F
Sbjct: 283 TS---ALSQCCEVKCLELGIQVHALCTKLG--YESNLRVRNSLLYLYLKCGCIVEAQRLF 337

Query: 287 DNCLERNTEVWNTMIGGYVQN-----------NHPVEAIELFVQVLELDEIVFDDVTFLS 335
               + N   WN MI G+ Q               +EA+ LF + L    +  D  TF S
Sbjct: 338 KGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSK-LNRSGMKPDPFTFSS 396

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RD 375
            LS  S++  L+ G+Q+HA  IK      V+V +++I                     R 
Sbjct: 397 VLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRT 456

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
           ++ W TMI+ F Q+G   + L L  +M+  G   + VT   +LSA  +    +       
Sbjct: 457 MILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFE 516

Query: 436 YLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            + +       M+ Y  L+DM  + G ++ A  + +K D     +  W+ +I G    G 
Sbjct: 517 IMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDY-KASEFIWSNLIVGCLSQGN 575

Query: 494 LEEAFVAFRQML 505
           LE    A  ++L
Sbjct: 576 LELGCDAAEKLL 587



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 69/295 (23%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFV------CNNLP-----YEAILLYSQMKKSSPYTSCD 106
           A++LF  +     V WN +I G         +NL       EA+ L+S++ +S      D
Sbjct: 333 AQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSG--MKPD 390

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            +T+SSVL  C++   L  G+ +H   I+        V +S++NMY+ C S   A     
Sbjct: 391 PFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERAS---- 446

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                         KVF  M  R ++ W T+++ + +     +A+  F  M  +GIRP+ 
Sbjct: 447 --------------KVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNL 492

Query: 227 ISFVNVFPALSSLG--------------DYKSADV------VYGLLVKLGS--------- 257
           ++FV V  A  S G              +YK   V      +  +LV+LG          
Sbjct: 493 VTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIK 552

Query: 258 --EYVNDLFVASSAIFMY-----AELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             +Y    F+ S+ I         ELGC D A K+  +   ++TE +  ++  YV
Sbjct: 553 KMDYKASEFIWSNLIVGCLSQGNLELGC-DAAEKLL-SLKPKDTETYKLLLNAYV 605


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 173/491 (35%), Positives = 282/491 (57%), Gaps = 31/491 (6%)

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
           D   + + L   +QL +L  G+ +H +++ +     +++ N+++                
Sbjct: 73  DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLF 132

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
                RD+VSW +MI+ + QN    + L+L   M   G   +  T+++L+     + + +
Sbjct: 133 DEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYN 192

Query: 429 VGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
            G+Q HA   ++G H   F G  S L+DMYA+ G +  A  +F+K   G +++ +WNA+I
Sbjct: 193 CGRQIHACCWKYGCHSNVFVG--SSLVDMYARCGYLGEAMLVFDK--LGCKNEVSWNALI 248

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           AGY + G  EEA   F +M      P   T +++L +C+ MG +E GK LH   ++    
Sbjct: 249 AGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQK 308

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
              +VG +L+ MY+KSG I  A  VF K+ + + V+  +M++GY QHG+ + A   F  M
Sbjct: 309 LVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEM 368

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
              GIEP+ ITF++VL+ACS+A L+DEG   F LM++ Y I+P   HY  + D+LGR G 
Sbjct: 369 IRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGL 427

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           + +A  F++E+  E  V  IWG+LLG+ ++H ++E+    A+++ E+D   S PG H LL
Sbjct: 428 LDQAKSFIEEMPIEPTV-AIWGALLGASKMHKNTEMGAYAAQRVFELDP--SYPGTHTLL 484

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           +NIYA  G WE+V KVRK M++ G++KE  CSW++V   V+ F + D  HPQ  KI++M 
Sbjct: 485 ANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMW 544

Query: 786 ERLAMEMRNAG 796
           E+L  +++  G
Sbjct: 545 EKLNQKIKEIG 555



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 196/388 (50%), Gaps = 26/388 (6%)

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           + P    +  +    + LG  K   +V+     L S + +DL + +S +FMYA  G  + 
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVH--FHVLNSNFKHDLVIQNSLLFMYARCGSLEG 127

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD    R+   W +MI GY QN+   +A+ LF ++L  D    ++ T  S +    
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLS-DGAEPNEFTLSSLVKCCG 186

Query: 342 QLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNT 381
            +   + G+Q+HA   K                     ++   ++V + +  ++ VSWN 
Sbjct: 187 YMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNA 246

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I+ + + G  +E L L   MQ++G+     T +ALLS+ S++   + GK  HA+L++  
Sbjct: 247 LIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSS 306

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
               G + + L+ MYAKSG I+ A ++F+K      D  + N+M+ GY Q+GL +EA   
Sbjct: 307 QKLVGYVGNTLLHMYAKSGSIRDAEKVFDK--LVKVDVVSCNSMLIGYAQHGLGKEAAQQ 364

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
           F +M+   + PN +T  SVL AC+    ++ GK   G   +Y ++  V    +++D+  +
Sbjct: 365 FDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGR 424

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILG 588
           +G+++ A +   ++P + +V     +LG
Sbjct: 425 AGLLDQAKSFIEEMPIEPTVAIWGALLG 452



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 194/422 (45%), Gaps = 43/422 (10%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D   Y+++LK C +   L+ GK VH H +         + NSLL MY+ C S   A    
Sbjct: 73  DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR--- 129

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                          ++FD M  R++V+W ++++ Y + +R  +A+  F  ML  G  P+
Sbjct: 130 ---------------RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +  ++      +  Y     ++    K G    +++FV SS + MYA  G    A  +
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYGCH--SNVFVGSSLVDMYARCGYLGEAMLV 232

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD    +N   WN +I GY +     EA+ LFV+ ++ +     + T+ + LS+ S +  
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVR-MQREGYRPTEFTYSALLSSCSSMGC 291

Query: 346 LDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISA 385
           L+ G+ LHA+++K+      +V   ++              V + +++ DVVS N+M+  
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + Q+GL  E      EM + G   + +T  ++L+A S+ R  D GK     + ++ I  +
Sbjct: 352 YAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPK 411

Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               + ++D+  ++GL+  A+   E+    +   A W A++     +   E    A +++
Sbjct: 412 VSHYATIVDLLGRAGLLDQAKSFIEEMPI-EPTVAIWGALLGASKMHKNTEMGAYAAQRV 470

Query: 505 LE 506
            E
Sbjct: 471 FE 472



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 198/430 (46%), Gaps = 46/430 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V W ++I G+  N+   +A+LL+ +M   S     + +T SS++K C
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRM--LSDGAEPNEFTLSSLVKCC 185

Query: 118 AETRNLRIGKAVH--CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
               +   G+ +H  C    C SN   FV +SL++MY+ C   L   M+           
Sbjct: 186 GYMASYNCGRQIHACCWKYGCHSNV--FVGSSLVDMYARC-GYLGEAML----------- 231

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 VFD +  +N V+WN +++ Y +     EA+  F  M R G RP+  ++  +  +
Sbjct: 232 ------VFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            SS+G  +    ++  L+K   + V   +V ++ + MYA+ G    A K+FD  ++ +  
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVG--YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVV 343

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
             N+M+ GY Q+    EA + F +++    I  +D+TFLS L+A S  + LD G+     
Sbjct: 344 SCNSMLIGYAQHGLGKEAAQQFDEMIRFG-IEPNDITFLSVLTACSHARLLDEGKHYFGL 402

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV- 414
           + K             IE  V  + T++    + GL D+    + EM  +     +V + 
Sbjct: 403 MRK-----------YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIE----PTVAIW 447

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL---IKTARQIFEKN 471
            ALL A+   +N ++G      +      + G  + L ++YA +G    +   R+I + +
Sbjct: 448 GALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDS 507

Query: 472 DSGDRDQATW 481
                   +W
Sbjct: 508 GVKKEPACSW 517



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 7/232 (3%)

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           ++ P+     ++L  C  +G ++ GK +H   +      ++ +  SL+ MY++ G +  A
Sbjct: 69  SLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             +F ++P ++ V++T+MI GY Q+  +  AL LF  M   G EP+  T  +++  C Y 
Sbjct: 129 RRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYM 188

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
              + G QI     + Y    +      + DM  R G + EA     +LG +  V   W 
Sbjct: 189 ASYNCGRQIHACCWK-YGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEV--SWN 245

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA----EEGNW 735
           +L+      G  E A  +  ++     R +   Y  LLS+  +    E+G W
Sbjct: 246 ALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKW 297


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 205/711 (28%), Positives = 363/711 (51%), Gaps = 60/711 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y   L+ C +  ++R    +H   I   ++ + F+ N ++  Y  C S   A +      
Sbjct: 30  YRDALRQCQDLESVR---QIH-DRISGAASANVFLGNEIVRAYGKCGSVASARVA----- 80

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                        FD + R+N  +W ++++ Y +   Y  A+  ++   RM ++P+ + +
Sbjct: 81  -------------FDAIARKNDYSWGSMLTAYAQNGHYRAALDLYK---RMDLQPNPVVY 124

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAELGCFDFARKIFDN 288
             V  A +S+   +    ++  +   G++ +  D+ + +S + MYA+ G  + A+++F+ 
Sbjct: 125 TTVLGACASIEALEEGKAIHSRIS--GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFER 182

Query: 289 -CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               R+   WN MI  Y Q+ H  EAI L+ + ++++  V    TF S LSA S L  LD
Sbjct: 183 MSGRRSVSSWNAMIAAYAQSGHFEEAIRLY-EDMDVEPSV---RTFTSVLSACSNLGLLD 238

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
            G+++HA I      L + + NA++                     RDVVSW+ MI+AF 
Sbjct: 239 QGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFA 298

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
           +  L DE +    +MQ +G   +  T  ++L A +++ +   G+  H  +L +G     +
Sbjct: 299 ETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLV 358

Query: 448 E-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + L+D+Y   G +  AR +F++ +  +RD+  W  +I GY++ G        +R+M  
Sbjct: 359 NGTALVDLYTSYGSLDEARSLFDQIE--NRDEGLWTVLIGGYSKQGHRTGVLELYREMKN 416

Query: 507 HNVTPNVVTIAS-VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
               P    I S V+ AC  +G     +Q H       +  +  + TSL++MYS+ G + 
Sbjct: 417 TTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLE 476

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A  VF K+  ++++ +TT+I GY +HG    AL L++ M+  G EP  +TF+ VL ACS
Sbjct: 477 SARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACS 536

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AGL ++G Q+F  +Q +Y + P+  HY C+ D+L R G++ +A E +  +  E N +  
Sbjct: 537 HAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV-T 595

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W SLLG+ R+H   + A   A ++ ++D  +  P  +VLLSN++A  GN   +  VR  M
Sbjct: 596 WSSLLGASRIHKDVKRATHAAGQITKLDPVD--PASYVLLSNVHAVTGNLAGMASVRNTM 653

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             RG++K  G SWI+V   ++ F   D  HP+  +I+  L+RL+ +++ AG
Sbjct: 654 VARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAG 704



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 151/570 (26%), Positives = 272/570 (47%), Gaps = 63/570 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKA 116
           AR  FD+I R     W +++  +  N     A+ LY +M  + +P        Y++VL A
Sbjct: 77  ARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQPNP------VVYTTVLGA 130

Query: 117 CAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           CA    L  GKA+H              + NSLL MY+ C S  DA+             
Sbjct: 131 CASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK------------- 177

Query: 176 YDLVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                ++F+ M  RR+V +WN +++ Y ++  + EA+R +     M + PS  +F +V  
Sbjct: 178 -----RLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYE---DMDVEPSVRTFTSVLS 229

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A S+LG       ++ L+   G+E   DL + ++ + MYA   C D A KIF     R+ 
Sbjct: 230 ACSNLGLLDQGRKIHALISSRGTEL--DLSLQNALLTMYARCKCLDDAAKIFQRLPRRDV 287

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W+ MI  + + +   EAIE + + ++L+ +  +  TF S L A + + +L  G+ +H 
Sbjct: 288 VSWSAMIAAFAETDLFDEAIEFYSK-MQLEGVRPNYYTFASVLLACASVGDLRAGRAVHD 346

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
            I+ N   + ++   A+++                    RD   W  +I  + + G    
Sbjct: 347 QILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQG-HRT 405

Query: 395 GLMLVYEMQKQGFMIDSVTV--TALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
           G++ +Y   K    + +  +  + ++SA ++L      +Q H+ +   G+  +  + + L
Sbjct: 406 GVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSL 465

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ++MY++ G +++ARQ+F+K  S  RD   W  +IAGY ++G    A   +++M      P
Sbjct: 466 VNMYSRWGNLESARQVFDKMSS--RDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEP 523

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           + +T   VL AC+  G  E GKQL   SI+  Y +  N+   + +ID+ S++G ++ A  
Sbjct: 524 SELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEE 582

Query: 570 VFAKIP-EKNSVTYTTMILGYGQHGMSERA 598
           +   +P E N VT+++++     H   +RA
Sbjct: 583 LINAMPVEPNDVTWSSLLGASRIHKDVKRA 612



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 189/441 (42%), Gaps = 65/441 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  + R   V W+ +I  F   +L  EAI  YS+M+        + YT++SVL AC
Sbjct: 275 AAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEG--VRPNYYTFASVLLAC 332

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +LR G+AVH   +      +     +L+++Y++                  Y   D
Sbjct: 333 ASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTS------------------YGSLD 374

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST-ISFVNVFPAL 236
               +FD +  R+   W  ++  Y K       +  +R M      P+T I +  V  A 
Sbjct: 375 EARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISAC 434

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           +SLG +  A   +  +   G   ++D  +A+S + MY+  G  + AR++FD    R+T  
Sbjct: 435 ASLGAFADARQAHSDIEADG--MISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA 492

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W T+I GY ++     A+ L+ + +EL+     ++TF+  L A S     + G+QL   I
Sbjct: 493 WTTLIAGYAKHGEHGLALGLYKE-MELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISI 551

Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
             ++   P          ++  ++ +I    + G   +   L+  M  +    + VT ++
Sbjct: 552 QSDYAMHP----------NIAHYSCIIDLLSRAGRLSDAEELINAMPVEP---NDVTWSS 598

Query: 417 LLSAASNLRNQDVGKQTHA--------------YLLRHGIH-----FEGMESYLIDMYAK 457
           LL A+    ++DV + THA              Y+L   +H       GM S    M A+
Sbjct: 599 LLGASRI--HKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVAR 656

Query: 458 -------SGLIKTARQIFEKN 471
                  S  I+ A QI E N
Sbjct: 657 GVKKRRGSSWIEVADQIHEFN 677


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 215/769 (27%), Positives = 381/769 (49%), Gaps = 66/769 (8%)

Query: 58   ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
            A +LF+ I  P  V W ++++ +  N    E + +Y  ++ +     C   T ++V++ C
Sbjct: 303  ANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLI--CTGNTMATVIRTC 360

Query: 118  AETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                +  +G  +    I+      S  V NSL++M+                   +Y   
Sbjct: 361  GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFG------------------NYDSV 402

Query: 177  DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
            +   +VF+ M+ R+ ++WN+I++      R+ E++  F  M R   +   I+   + PA 
Sbjct: 403  EEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPAC 462

Query: 237  SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
             S    K    ++GL+ K G E  +++ V +S + MYA+ G  + A  +F     R+   
Sbjct: 463  GSAQHLKWGRGLHGLITKSGLE--SNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLIS 520

Query: 297  WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
            WN+M+  +V++     AI L V++L+  +   + VTF +ALSA   L++L +   +HA++
Sbjct: 521  WNSMMASHVEDGKYSHAILLLVEMLKTRK-AMNYVTFTTALSACYNLEKLKI---VHAFV 576

Query: 357  IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
            I   V   +I+ N ++                    ERDVV+WN +I     +   +  +
Sbjct: 577  IHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATI 636

Query: 397  MLVYEMQKQGFMIDSVTVTALLSAASN----LRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
                 M+++G + + +T+  LL    +    L++   G   HA+++  G   +  ++S L
Sbjct: 637  QAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKH---GMPIHAHIVVAGFELDTYVQSSL 693

Query: 452  IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
            I MYA+ G + T+  IF+     +++ +TWNA+ +     G  EEA     +M    V  
Sbjct: 694  ITMYAQCGDLNTSSYIFDV--LANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDL 751

Query: 512  NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            +  + +  L     +  ++ G+QLH + I+   + + +V  + +DMY K G I+   +VF
Sbjct: 752  DQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID---DVF 808

Query: 572  AKIPE---KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
              +P    ++  ++  +I    +HG   +A   F  M   G++PD +TFV++LSACS+ G
Sbjct: 809  RILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGG 868

Query: 629  LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            LVDEGL  F  M  E+ +  + EH  C+ D+LGR G++ EA  F+ ++    N   +W S
Sbjct: 869  LVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEF-VWRS 927

Query: 689  LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
            LL +C++HG+ EL    A +L E+++ +     +VL SN+ A    W +V+ VRK+M  +
Sbjct: 928  LLAACKVHGNLELGRKAADRLFELNSSDDSA--YVLYSNVCASTQRWGDVENVRKQMESQ 985

Query: 749  GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
             L+K+  CSWI +   V  F   DQ HPQS +IY  LE L    R  G+
Sbjct: 986  SLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGH 1034



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 161/660 (24%), Positives = 297/660 (45%), Gaps = 58/660 (8%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK 98
           T T+ +  SK    G    A+ +FD +       WN +I GFV     ++A+  +  M +
Sbjct: 185 TNTLVNMYSKF---GSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFE 241

Query: 99  SSPYTSCDNYTYSSVLKACAETRNLRIG-KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
           +    S  +Y  +S++ AC  +  +  G + +H + ++C    + FV  SLL+ Y T  S
Sbjct: 242 NGVTPS--SYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGS 299

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
             +A                   K+F+ +   N+V+W +++  Y       E +  +R +
Sbjct: 300 VSEAN------------------KLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL 341

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
              G+  +  +   V       GD      + G ++K G +  + + VA+S I M+    
Sbjct: 342 RHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLD-TSSVSVANSLISMFGNYD 400

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + A ++F+N  ER+T  WN++I     N    E++  F  +        D +T  + L
Sbjct: 401 SVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKT-DYITISALL 459

Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVV 377
            A    Q L  G+ LH  I K+ +   V V N+++                     RD++
Sbjct: 460 PACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLI 519

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SWN+M+++ V++G     ++L+ EM K    ++ VT T  LSA  NL    +    HA++
Sbjct: 520 SWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFV 576

Query: 438 LRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
           +   +H    + + L+ MY K GL+  A+++ +     +RD  TWNA+I G+  +     
Sbjct: 577 IHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP--ERDVVTWNALIGGHADDKDPNA 634

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPAC-NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI 555
              AF  M    +  N +TI ++L  C +P   ++ G  +H   +    + + +V +SLI
Sbjct: 635 TIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLI 694

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MY++ G +N ++ +F  +  KNS T+  +      +G  E AL     M+  G++ D  
Sbjct: 695 TMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQF 754

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFV 673
           +F   L+      ++DEG Q+   +    K+    + Y   A  DM G+ G++ + +  +
Sbjct: 755 SFSVALATIGNLTVLDEGQQLHSWI---IKLGFELDEYVLNATMDMYGKCGEIDDVFRIL 811



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 252/533 (47%), Gaps = 49/533 (9%)

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           K  +E     +GKA+H   ++     + F  N+L+NMYS             K+  + Y+
Sbjct: 155 KGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYS-------------KFGSIKYA 201

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           ++     VFD M  RN  +WN ++S +V+   Y +A++ F  M   G+ PS+    ++  
Sbjct: 202 QH-----VFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVT 256

Query: 235 ALSSLGDY-KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
           A    G   + A  ++G +VK G   ++++FV +S +  Y   G    A K+F+   E N
Sbjct: 257 ACDRSGCMTEGARQIHGYVVKCG--LMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPN 314

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W +++  Y  N H  E + ++   L  + ++    T  + +       +  +G Q+ 
Sbjct: 315 IVSWTSLMVCYADNGHTKEVLNIYRH-LRHNGLICTGNTMATVIRTCGMFGDKTMGYQIL 373

Query: 354 AYIIKN-------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
             +IK+        VA  +I              V N + ERD +SWN++I+A   NG  
Sbjct: 374 GDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRF 433

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
           +E L   + M++     D +T++ALL A  + ++   G+  H  + + G+     + + L
Sbjct: 434 EESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSL 493

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + MYA++G  + A  +F    +  RD  +WN+M+A + ++G    A +   +ML+     
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPA--RDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM 551

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           N VT  + L AC    N+E  K +H F I + +  N+ +G +L+ MY K G+++ A  V 
Sbjct: 552 NYVTFTTALSACY---NLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVC 608

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             +PE++ VT+  +I G+         +  F  M+  G+  + IT V +L  C
Sbjct: 609 KIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTC 661



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 212/462 (45%), Gaps = 37/462 (8%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           + F  ++ + MY++ G   +A+ +FD   +RN   WN MI G+V+     +A++ F  + 
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLG-QQLHAYIIKNFVALPVIVLNAVI-------- 372
           E + +        S ++A  +   +  G +Q+H Y++K  +   V V  +++        
Sbjct: 241 E-NGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGS 299

Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                       E ++VSW +++  +  NG   E L +   ++  G +    T+  ++  
Sbjct: 300 VSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRT 359

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
                ++ +G Q    +++ G+    +   + LI M+     ++ A ++F  N+  +RD 
Sbjct: 360 CGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVF--NNMQERDT 417

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            +WN++I     NG  EE+   F  M   +   + +TI+++LPAC    +++ G+ LHG 
Sbjct: 418 ISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGL 477

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
             +  L+ NV V  SL+ MY+++G    A  VF  +P ++ +++ +M+  + + G    A
Sbjct: 478 ITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHA 537

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           + L   M       + +TF   LSAC       E L+I       + +  +      +  
Sbjct: 538 ILLLVEMLKTRKAMNYVTFTTALSACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVT 593

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           M G+ G + EA +  K + E   V   W +L+G     GH++
Sbjct: 594 MYGKFGLMDEAQKVCKIMPERDVV--TWNALIG-----GHAD 628



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 232/537 (43%), Gaps = 79/537 (14%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   Q G    A  +F ++     + WN+++   V +     AILL  +M K+    
Sbjct: 492 SLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM 551

Query: 104 SCDNY-TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
              NY T+++ L AC     L+I   VH   I    + +  + N+L+ MY          
Sbjct: 552 ---NYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYG--------- 596

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
               K+  +D ++   VCK+   M  R+VV WN ++  +   +     ++ F +M R G+
Sbjct: 597 ----KFGLMDEAQK--VCKI---MPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGL 647

Query: 223 RPSTISFVNVFPALSSLGDY--KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
             + I+ VN+     S  DY  K    ++  +V  G E   D +V SS I MYA+ G  +
Sbjct: 648 LSNYITIVNLLGTCMS-PDYLLKHGMPIHAHIVVAGFEL--DTYVQSSLITMYAQCGDLN 704

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
            +  IFD    +N+  WN +           EA++ F+  +  D +  D  +F  AL+ +
Sbjct: 705 TSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK-FIARMRNDGVDLDQFSFSVALATI 763

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
             L  LD GQQLH++IIK    L   VLNA ++                    R   SWN
Sbjct: 764 GNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWN 823

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +ISA  ++G   +     +EM   G   D VT  +LLSA S           H  L+  
Sbjct: 824 ILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS-----------HGGLVDE 872

Query: 441 G-IHFEGMES------------YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           G ++F  M S             +ID+  +SG +  A    +K      ++  W +++A 
Sbjct: 873 GLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPV-PPNEFVWRSLLAA 931

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPN--VVTIASVLPACNPMGNIE-LGKQLHGFSIR 541
              +G LE    A  ++ E N + +   V  ++V  +    G++E + KQ+   S++
Sbjct: 932 CKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLK 988



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 142/281 (50%), Gaps = 6/281 (2%)

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S +   +VGK  HA  ++  I       + L++MY+K G IK A+ +F+K    DR+ A+
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDK--MYDRNDAS 215

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFS 539
           WN MI+G+ + G   +A   F  M E+ VTP+   IAS++ AC+  G +  G +Q+HG+ 
Sbjct: 216 WNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYV 275

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           ++  L  NVFVGTSL+  Y   G ++ A  +F +I E N V++T++++ Y  +G ++  L
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
           +++R ++  G+     T   V+  C   G    G QI   + +      S      +  M
Sbjct: 336 NIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISM 395

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            G    V EA      + E   +   W S++ +   +G  E
Sbjct: 396 FGNYDSVEEASRVFNNMQERDTI--SWNSIITASAHNGRFE 434


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 217/764 (28%), Positives = 391/764 (51%), Gaps = 74/764 (9%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
             +I  ++ +  P +A+ L+ +M+        + +   +++ AC+   NL  G+ +H   
Sbjct: 113 TAMIRAWMEHGRPDKAMELFDRMEVRP-----NCHALIALVNACSCLGNLAAGRRIHSQI 167

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR---RN 190
                  +  + N+L++MYS C S +DA+                  + FD + R   R+
Sbjct: 168 SDRDFEENSVLGNALISMYSKCGSLIDAK------------------QAFDRLPRASKRD 209

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STISFVNVFPALSSLGDYKSADV-- 247
           VV WN ++S +++     EA++ FR M R G  P ++++FV+V  +    G     DV  
Sbjct: 210 VVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRA 269

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE-------VWNTM 300
           ++G +V  G E   + FV ++ +  Y +LG  D A ++F   L +  E         + M
Sbjct: 270 IHGRIVGAGIE--REAFVRTALVDSYGKLGSLDDAWEVF---LRKGDEEPSTSLVTCSAM 324

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ---------------- 344
           I    QN  P E++ LF   + L+      VT +S L+A S LQ                
Sbjct: 325 ISACWQNGWPQESLRLFF-AMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVV 383

Query: 345 ----ELDLGQQL-HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
               +  LG  L   Y   N +       +A+   DVVSWN M +A++Q+    E L+L 
Sbjct: 384 SATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLF 443

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQD---VGKQTHAYLLRHGIHFE-GMESYLIDMY 455
             M  +G      T    L+A +    Q    +GK+  + L   G+  +  + +  ++MY
Sbjct: 444 ERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMY 503

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVV 514
           AK G +  AR +FE+     RD  TWN+M+A Y  +GL +EAF  F+ M  E  V PN V
Sbjct: 504 AKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKV 563

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  +VL A     +I  G+++H   +    + +  +  +L++MY+K G ++ A  +F K 
Sbjct: 564 TFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKS 623

Query: 575 P--EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
              +++ + +T++I GY Q+G +ERAL LF +M+  G+ P+ +TF++ L+AC++ G +++
Sbjct: 624 SSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQ 683

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G ++   M  ++ I P+++H+ C+ D+LGR G++ EA + + E   + +V+  W +LL +
Sbjct: 684 GCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLL-ERTSQADVI-TWMALLDA 741

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           C+     E  E  A++++++D    +   +++L+++YA  G W     +RK M ++G+R 
Sbjct: 742 CKNSKELERGERCAERIMQLDPE--VASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRA 799

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + GCS ++V   ++ F++ D+ HP+S +IY  LERL   ++ AG
Sbjct: 800 DPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAG 843



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 162/656 (24%), Positives = 285/656 (43%), Gaps = 87/656 (13%)

Query: 58  ARQLFDSITRPT---TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A+Q FD + R +    V WN +I  F+ N    EA+ L+  M +       ++ T+ SVL
Sbjct: 195 AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPP-NSVTFVSVL 253

Query: 115 KACAETRNLRIG--KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +C E   L +   +A+H   +        FV  +L++ Y    S  DA  V L+  + +
Sbjct: 254 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEE 313

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S   + C    +   +N   W              E++R F  M   G +PS ++ V+V
Sbjct: 314 PSTSLVTCSAMISACWQN--GWPQ------------ESLRLFFAMNLEGTKPSGVTLVSV 359

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L    +   V    +++ S    D  + ++ +  YA       AR  FD     
Sbjct: 360 LNACSMLQVGSATAFVLEQAMEVVSA-TRDNVLGTTLLTTYARSNDLPRARATFDAIQSP 418

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL---QELDLG 349
           +   WN M   Y+Q++   EA+ LF ++L L+ +     TF++AL+A +         +G
Sbjct: 419 DVVSWNAMAAAYLQHHRSREALVLFERML-LEGVRPSVATFITALTACAAYPPQTASAIG 477

Query: 350 QQLHAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFV 387
           +++ + + +  +     V NA +                       RD ++WN+M++A+ 
Sbjct: 478 KRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYG 537

Query: 388 QNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            +GL  E   L   M+ +  +  + VT  A+L A+++  +   G++ HA ++ +G   + 
Sbjct: 538 HHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDT 597

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +++ L++MYAK G +  A+ IF+K+ S   D   W ++IAGY Q G  E A   F  M 
Sbjct: 598 VIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQ 657

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +  V PN VT  S L ACN  G +E G +L                  L  M    G++ 
Sbjct: 658 QQGVRPNHVTFISALTACNHGGKLEQGCEL------------------LSGMTPDHGIL- 698

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
                        S  ++ ++   G+ G  + A  L         + D IT++A+L AC 
Sbjct: 699 -----------PASKHFSCIVDLLGRCGRLDEAEKLLERTS----QADVITWMALLDACK 743

Query: 626 YAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            +  ++ G +  + +MQ + ++  S   Y  +A M    G+  EA    K + ++G
Sbjct: 744 NSKELERGERCAERIMQLDPEVASS---YIVLASMYAAAGRWNEAATIRKTMLDKG 796



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 165/323 (51%), Gaps = 32/323 (9%)

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIK--------NFVALPVIVLN----------AVIE 373
           T+   L A  +L+ L  GQ+LHA+I+         +F+A  +IV++          A+ +
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 374 R--DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           R   V S   MI A++++G  D+ + L   M+ +    +   + AL++A S L N   G+
Sbjct: 105 RFASVYSCTAMIRAWMEHGRPDKAMELFDRMEVRP---NCHALIALVNACSCLGNLAAGR 161

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK-NDSGDRDQATWNAMIAGYT 489
           + H+ +          + + LI MY+K G +  A+Q F++   +  RD  TWNAMI+ + 
Sbjct: 162 RIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFL 221

Query: 490 QNGLLEEAFVAFRQMLEHNV-TPNVVTIASVLPACNPMG--NIELGKQLHGFSIRYLLDQ 546
           +NG   EA   FR M       PN VT  SVL +C   G  ++E  + +HG  +   +++
Sbjct: 222 RNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIER 281

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKI----PEKNSVTYTTMILGYGQHGMSERALSLF 602
             FV T+L+D Y K G ++ A  VF +     P  + VT + MI    Q+G  + +L LF
Sbjct: 282 EAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLF 341

Query: 603 RSMKGCGIEPDAITFVAVLSACS 625
            +M   G +P  +T V+VL+ACS
Sbjct: 342 FAMNLEGTKPSGVTLVSVLNACS 364



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 151/306 (49%), Gaps = 32/306 (10%)

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--- 446
           G++D    +   +  QG    S T   LL A   LR    G++ HA++L   I       
Sbjct: 23  GVEDLTAAVSRIIADQGHCAPS-TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSF 81

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN--AMIAGYTQNGLLEEAFVAFRQM 504
           + S LI M+AK G +  A  +       DR  + ++  AMI  + ++G  ++A   F +M
Sbjct: 82  LASDLIVMHAKCGNLAEAEAL------ADRFASVYSCTAMIRAWMEHGRPDKAMELFDRM 135

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               V PN   + +++ AC+ +GN+  G+++H        ++N  +G +LI MYSK G +
Sbjct: 136 ---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSL 192

Query: 565 NYAANVFAKIP---EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI-EPDAITFVAV 620
             A   F ++P   +++ VT+  MI  + ++G +  AL LFR M   G   P+++TFV+V
Sbjct: 193 IDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSV 252

Query: 621 LSACSYAGLVD-------EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
           L +C  AGL+         G  +   +++E  ++ +      + D  G++G + +A+E  
Sbjct: 253 LDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTA------LVDSYGKLGSLDDAWEVF 306

Query: 674 KELGEE 679
              G+E
Sbjct: 307 LRKGDE 312


>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
          Length = 920

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 209/741 (28%), Positives = 372/741 (50%), Gaps = 72/741 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H +R +F  I      +WN+ ++ +     P E I+LY ++K +      +  T + 
Sbjct: 94  GALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILYKRLKLNQ--IGFNGKTITF 151

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V+K+C E +NL +GK VH   ++   + ++FV +SL+ +YS                   
Sbjct: 152 VMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYS------------------K 193

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM---MLRMGIRPSTISF 229
           +SK +    VF+ +  +++VA+ ++++ Y +T   + A   F +   ML+  +  + ++ 
Sbjct: 194 FSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSI-AWNAFEIATDMLQNNLEVNRVTL 252

Query: 230 VNVFPALSSLGDYKSADVV--YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           V++     +LG  +    +  Y +   +G   V+D  + +S +  Y   G +  A  +  
Sbjct: 253 VSLLQIAGNLGALQEGKSLHCYSIRRAIG---VSDDILETSIVNFYTRCGAYQSAATVLQ 309

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           N  +     WN ++ G  +      AI+    +L   ++  D VTF + LSA ++L    
Sbjct: 310 NS-KGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFC 368

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
               +HAY I+ F+ + V++  A+IE                    +DVVS+N MI  ++
Sbjct: 369 FAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYL 428

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           QN + +E   L+  M  +G   D  TV +LL+A ++ R+   G+  H + +RHG   +  
Sbjct: 429 QNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVD 488

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           +E+ ++ MY+  G I  AR IF+  +   ++  +W AM+ G   NG  +E    F+ M +
Sbjct: 489 VENQILYMYSACGKIAAARAIFDSLEK--KNLVSWTAMMKGCLSNGHADEVVQLFQVMQK 546

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
           +   P+ V++ + + A + +G++   KQ+H F  R LL+++     SLI  Y+K G ++ 
Sbjct: 547 YGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDL 606

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +A +F  +  +N  T+  MI  Y  HG     L +F+ M+   I+PD +TF  VL+ACS+
Sbjct: 607 SAGLFFSLKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSH 666

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV +G +IF+ M   Y + P  EHY C+ D+LGR G + + Y+F+K L    +   I+
Sbjct: 667 AGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIK-LSTLKDKSTIF 725

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LL +CR HG++ LA  ++K+LLE   +N +PG           + +W+N    R  + 
Sbjct: 726 CALLSACRTHGNTRLAHAISKELLEHGPQNPVPG-----------QTSWQNDTSWRLTLH 774

Query: 747 ERGL-RKEVGC------SWID 760
            RG+  K VG       SWI+
Sbjct: 775 CRGVSSKLVGADPGATQSWIE 795



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 231/477 (48%), Gaps = 50/477 (10%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D+ + S  +  YA LG    +R +F   +  +  +WN+ +  Y +  +P E I L+ + L
Sbjct: 79  DVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAGYPEEVIILY-KRL 137

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------- 366
           +L++I F+  T    + + ++L+ L LG+ +HA  +K       FV   +I         
Sbjct: 138 KLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKT 197

Query: 367 -----VLNAVIERDVVSWNTMISAFVQ--NGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                V   +I +D+V++ +MI+ + +  + +      +  +M +    ++ VT+ +LL 
Sbjct: 198 NDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNLEVNRVTLVSLLQ 257

Query: 420 AASNLRNQDVGKQTHAYLLRH--GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
            A NL     GK  H Y +R   G+  + +E+ +++ Y + G  ++A  + + N  G   
Sbjct: 258 IAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQ-NSKG--T 314

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
            A+WNA+++G  + G    A      ML EH VTP+ VT A+VL AC  +        +H
Sbjct: 315 VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIH 374

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            + IR  +  +V + T+LI++Y+K   +  +  +F ++  K+ V+Y  MI GY Q+ M+ 
Sbjct: 375 AYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMAN 434

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-YCC 655
            A SL   M   G+ PD  T +++L+A       D+     DL++  +    +  H +C 
Sbjct: 435 EATSLLNYMMAEGVAPDFATVLSLLAA-----FADQR----DLVRGRWIHGFAIRHGFCS 485

Query: 656 VAD-------MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
             D       M    GK+  A      L E+ N++  W +++  C  +GH++  EVV
Sbjct: 486 DVDVENQILYMYSACGKIAAARAIFDSL-EKKNLVS-WTAMMKGCLSNGHAD--EVV 538


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/569 (31%), Positives = 293/569 (51%), Gaps = 61/569 (10%)

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F +  ER+   +N +I G+     P  +++L+  +L  + +    +T  + +   S L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159

Query: 344 QELDLGQQLHAYIIK------NFVALPVIVLNA--------------------------- 370
            +  LG  +H  +++       FV  P++ + A                           
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219

Query: 371 ------------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                             +++RD ++W TM++   QNGL  E L +   M+ +G  ID  
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFE 469
           T  ++L+A   L   + GKQ HAY+ R       F G  S L+DMY+K   I+ A  +F 
Sbjct: 280 TFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVG--SALVDMYSKCRSIRLAEAVFR 337

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           +     R+  +W AMI GY QN   EEA  AF +M    + P+  T+ SV+ +C  + ++
Sbjct: 338 RMTC--RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E G Q H  ++   L + + V  +L+ +Y K G I  A  +F ++   + V++T ++ GY
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            Q G ++  + LF  M   G++PD +TF+ VLSACS AGLV++G   FD MQ+++ I P 
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPI 515

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ D+  R G+  EA EF+K++    +    W +LL SCRL G+ E+ +  A+ L
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFG-WATLLSSCRLRGNMEIGKWAAENL 574

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE D +N  P  +VLL +++A +G W  V  +R+ MR+R ++KE GCSWI     V+ F+
Sbjct: 575 LETDPQN--PASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 632

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           + DQ HP S +IYE LE L  +M   G K
Sbjct: 633 ADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/544 (25%), Positives = 251/544 (46%), Gaps = 88/544 (16%)

Query: 110 YSSVLKACAET---RNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           Y+++L + A       +R+  AVHC  ++ F   P  F+ N LL  Y+       A  V 
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 166 LKYVEVD-YSKYDLVC------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            +  + + +++  L+             ++F +M  R+ V++N +++ +  T     +V+
Sbjct: 72  DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131

Query: 213 QFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
            +R +LR   +RP+ I+   +    S+L D      V+  +++LG  +    FV S  + 
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLG--FGAYAFVGSPLVD 189

Query: 272 MYAELGCFDFARKIFD------------------NC-------------LERNTEVWNTM 300
           MYA++G    AR++F                    C             ++R++  W TM
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTM 249

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + G  QN   +EA+++F + +  + +  D  TF S L+A   L  L+ G+Q+HAYI + +
Sbjct: 250 VTGLTQNGLQLEALDVFRR-MRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTW 308

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V +A+++                    R+++SW  MI  + QN   +E +    
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSG 459
           EMQ  G   D  T+ +++S+ +NL + + G Q H   L  G+  +  + + L+ +Y K G
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I+ A ++F++      DQ +W A++ GY Q G  +E    F +ML + + P+ VT   V
Sbjct: 429 SIEDAHRLFDEMSF--HDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGV 486

Query: 520 LPACNPMGNIELG-------KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           L AC+  G +E G       ++ HG      +D +    T +ID+YS+SG    A     
Sbjct: 487 LSACSRAGLVEKGCDYFDSMQKDHGI---VPIDDHY---TCMIDLYSRSGRFKEAEEFIK 540

Query: 573 KIPE 576
           ++P 
Sbjct: 541 QMPH 544



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 209/507 (41%), Gaps = 71/507 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF S+     V +N +I GF     P  ++ LY  + +          T S+++   + 
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP-TRITLSAMIMVASA 158

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD-- 177
             +  +G +VHC  +R       FV + L++MY+      DA  V  +        Y+  
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 178 ----LVCK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               L CK       +F  M  R+ + W T+V+   +    +EA+  FR M   G+    
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F ++  A  +L   +    ++  + +  + Y +++FV S+ + MY++      A  +F
Sbjct: 279 YTFGSILTACGALAALEEGKQIHAYITR--TWYEDNVFVGSALVDMYSKCRSIRLAEAVF 336

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                RN   W  MI GY QN    EA+  F + +++D I  DD T  S +S+ + L  L
Sbjct: 337 RRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQMDGIKPDDFTLGSVISSCANLASL 395

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G Q H   + + +   + V NA++                      D VSW  +++ +
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q G   E + L  +M   G   D VT   +LSA S                R G+  +G
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACS----------------RAGLVEKG 499

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
            + Y   M    G++                   +  MI  Y+++G  +EA    +QM  
Sbjct: 500 CD-YFDSMQKDHGIVPIDDH--------------YTCMIDLYSRSGRFKEAEEFIKQMPH 544

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGK 533
              +P+    A++L +C   GN+E+GK
Sbjct: 545 ---SPDAFGWATLLSSCRLRGNMEIGK 568



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 171/402 (42%), Gaps = 36/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LF  +    ++ W T++ G   N L  EA+ ++ +M+        D YT+ S+L AC
Sbjct: 231 AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG--VGIDQYTFGSILTAC 288

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  GK +H +  R +   + FV ++L++MYS C S   AE               
Sbjct: 289 GALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE--------------- 333

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  RN+++W  ++  Y +     EAVR F  M   GI+P   +  +V  + +
Sbjct: 334 ---AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     + L   L S  +  + V+++ + +Y + G  + A ++FD     +   W
Sbjct: 391 NLASLEEGAQFHCL--ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E I+LF ++L  + +  D VTF+  LSA S+   ++ G      + 
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKMLA-NGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQ 507

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+   +P+             +  MI  + ++G   E    + +M       D+     L
Sbjct: 508 KDHGIVPID----------DHYTCMIDLYSRSGRFKEAEEFIKQMPHSP---DAFGWATL 554

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LS+     N ++GK     LL            L  M+A  G
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 61/249 (24%)

Query: 449 SYLIDMYAKSGLIKTARQIFEK-----------------------------NDSGDRDQA 479
           ++L+  YAKSG +  AR++F++                                 +RD  
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           ++NA+I G++  G    +   +R +L E +V P  +T+++++   + + +  LG  +H  
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP----------------------- 575
            +R       FVG+ L+DMY+K G+I  A  VF ++                        
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231

Query: 576 --------EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
                   +++S+T+TTM+ G  Q+G+   AL +FR M+  G+  D  TF ++L+AC   
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 628 GLVDEGLQI 636
             ++EG QI
Sbjct: 292 AALEEGKQI 300



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA  +F  +T    + W  +I+G+  N    EA+  +S+M+        D++T  SV+ +
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG--IKPDDFTLGSVISS 388

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRF--VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           CA   +L  G   HC  +   S   R+  V N+L+ +Y  C S  DA             
Sbjct: 389 CANLASLEEGAQFHC--LALVSGLMRYITVSNALVTLYGKCGSIEDAH------------ 434

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 ++FD M   + V+W  +V+ Y +  +  E +  F  ML  G++P  ++F+ V  
Sbjct: 435 ------RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLS 488

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           A S  G           LV+ G +Y + +
Sbjct: 489 ACSRAG-----------LVEKGCDYFDSM 506



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 16/153 (10%)

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D N+F   +L+   + S ++     +FA +PE+++V+Y  +I G+   G   R++ L+R+
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 605 -MKGCGIEPDAITFVAVLSACSYAGLVDEGL------QIFDLMQQEYKIQPSTEHYCCVA 657
            ++   + P  IT  A++   S   L D  L      Q+  L    Y    S      + 
Sbjct: 136 LLREESVRPTRITLSAMIMVAS--ALSDRALGHSVHCQVLRLGFGAYAFVGSP-----LV 188

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           DM  ++G + +A    +E+  E   + ++ +L+
Sbjct: 189 DMYAKMGLIRDARRVFQEM--EAKTVVMYNTLI 219


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/593 (32%), Positives = 325/593 (54%), Gaps = 40/593 (6%)

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
           A V++  ++K G+    DL V +S + +YA+ G    ARKIFD+   RN   W  ++ GY
Sbjct: 93  AQVIHAHIIKTGTH--KDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGY 150

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------ 358
           VQN+ P  AI++F  +LE   +   + T   AL+A S +  + LG+QLHA++IK      
Sbjct: 151 VQNSQPNIAIDVFQDMLESGTLP-SNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYD 209

Query: 359 --------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
                           +   + V  ++ E++V+SW  +ISA  +NG    GL    EM  
Sbjct: 210 PSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLL 269

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
           +    +  T+T +LS         +G+  H+  ++ G  +   + + ++ +Y K G +  
Sbjct: 270 EDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDE 329

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQN-GLLEEAFVAFRQ-------MLEHNVT---PN 512
           A+ +F K   G  +  TWNAMI+G+ Q   L ++ F A R         LE N T   P+
Sbjct: 330 AQILFHK--MGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPD 387

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           + T++SVL  C+ +  +  G+QLH  +I+     +V VGT+L++MYSK G I  A+  F 
Sbjct: 388 LFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFV 447

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           ++  +  +++TTMI G  QHG SE+AL LF  M+  G+ P+ ITFV VL+AC ++G+VDE
Sbjct: 448 EMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDE 507

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
            L  F++MQ+EY+I+P  +HY C+  M  ++ ++ EA++ + ++  E +   IW  L+  
Sbjct: 508 ALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEF-IWSILIAG 566

Query: 693 CRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRK 752
           CR  G  EL    A++LL++  +++    +V L N+Y     W++V +VRK M+E  L K
Sbjct: 567 CRNLGKQELGFYAAEQLLKLKLKDTET--YVTLLNMYISAKRWQDVSRVRKLMKEEKLGK 624

Query: 753 EVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
               SWI +   ++ F +  + HP + K+YE+LE L  + + +G ++ Q+  +
Sbjct: 625 FNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAKGSGYQSTQHMEI 677



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 213/476 (44%), Gaps = 61/476 (12%)

Query: 87  YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN 146
           +EA+    + KK  P     +Y Y  +L+ C +  ++   + +H H I+  ++    V  
Sbjct: 60  HEALCFIKEEKKIEP-----SY-YLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMT 113

Query: 147 SLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER 206
           SL+N+Y+ C +  +A                   K+FD++ RRNVVAW  +++ YV+  +
Sbjct: 114 SLVNVYAKCGAMGNAR------------------KIFDSLHRRNVVAWTALMTGYVQNSQ 155

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
              A+  F+ ML  G  PS  +      A S++   K    ++  ++K   +Y  D  + 
Sbjct: 156 PNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDY--DPSIG 213

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++   +Y++LG  D +  +F +  E+N   W  +I    +N      +  F ++L L++I
Sbjct: 214 NALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEML-LEDI 272

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
             ++ T  + LS       L LG+ +H+  IK      + + N+++              
Sbjct: 273 KPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQI 332

Query: 373 ------ERDVVSWNTMISAFVQN---GLDD--------EGLMLVYEMQKQGFMIDSVTVT 415
                   ++V+WN MIS   Q      DD        E L +  E+ + G   D  T++
Sbjct: 333 LFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLS 392

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           ++L+  S L     G+Q HA  ++ G   +  + + L++MY+K G I  A + F +  + 
Sbjct: 393 SVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMST- 451

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
            R   +W  MI G  Q+G  E+A   F  M    V PN +T   VL AC   G ++
Sbjct: 452 -RTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVD 506



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 217/487 (44%), Gaps = 67/487 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FDS+ R   V W  ++ G+V N+ P  AI ++  M +S    S  NYT    L AC
Sbjct: 128 ARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPS--NYTLGIALNAC 185

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   ++++GK +H   I+   +    + N+L ++YS  L SLD+ +              
Sbjct: 186 SAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSK-LGSLDSSI-------------- 230

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF ++  +NV++W  ++S   +  +    +R F  ML   I+P+  +   V     
Sbjct: 231 ---NVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCC 287

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                    +V+ L +KLG +Y  +L + +S +++Y + G  D A+ +F      N   W
Sbjct: 288 VTLALVLGRLVHSLSIKLGYQY--NLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTW 345

Query: 298 NTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQ 344
           N MI G+ Q               +EA+ +F   LEL+      D  T  S L+  S+L 
Sbjct: 346 NAMISGHAQAMDLAKDDFSAQRSGIEALSIF---LELNRTGKKPDLFTLSSVLTVCSRLS 402

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMIS 384
            L  G+QLHA  IK+     V+V  A++                     R ++SW TMI+
Sbjct: 403 ALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMIT 462

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA--SNLRNQDVG---KQTHAYLLR 439
              Q+G  ++ L L  +M+  G   + +T   +L+A   S + ++ +G        Y ++
Sbjct: 463 GLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIK 522

Query: 440 HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
             +   G    LI M+ K   +  A  I  K D  +  +  W+ +IAG    G  E  F 
Sbjct: 523 PVMDHYGC---LIAMFVKLRRLDEAFDIINKMDF-EPSEFIWSILIAGCRNLGKQELGFY 578

Query: 500 AFRQMLE 506
           A  Q+L+
Sbjct: 579 AAEQLLK 585



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 91/186 (48%), Gaps = 7/186 (3%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L  C    ++   + +H   I+    +++ V TSL+++Y+K G +  A  +F  +  +N
Sbjct: 80  LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRN 139

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V +T ++ GY Q+     A+ +F+ M   G  P   T    L+ACS    +  G Q+  
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199

Query: 639 LMQQEYKI--QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
            + + YK+   PS  +  C   +  ++G +  +    + +GE+ NV+  W +++ +C  +
Sbjct: 200 FVIK-YKLDYDPSIGNALC--SLYSKLGSLDSSINVFQSIGEK-NVIS-WTAVISACGEN 254

Query: 697 GHSELA 702
           G + + 
Sbjct: 255 GKAAMG 260


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 210/600 (35%), Positives = 314/600 (52%), Gaps = 68/600 (11%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           DLF  +  + MY +      A K+FD   ERNT  + T+I GY ++   +EAIELFV++ 
Sbjct: 72  DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131

Query: 322 ----ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI----- 366
               EL+  VF  +  L   +   +L     G  +HA I K       FV   +I     
Sbjct: 132 REGHELNPFVFTTILKLLVSTDCGEL-----GWGIHACIFKLGHESNAFVGTALIDAYSV 186

Query: 367 ---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                    V + ++ +D+VSW  M++ F +N    E L L  +M+  GF  ++ T  ++
Sbjct: 187 CGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASV 246

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
             A   L   DVGK  H   L+     +  +   L+D+Y KSG I  AR+ FE  +   +
Sbjct: 247 FKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFE--EIPKK 304

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D   W+ MIA Y Q+   +EA   F QM +  V PN  T ASVL AC  M  + LG Q+H
Sbjct: 305 DVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIH 364

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
              I+  L  +VFV  +L+D+Y+K G +  +  +FA+ P +N VT+ T+I+G+ Q G  E
Sbjct: 365 CHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGE 424

Query: 597 RALSLFRSM----------------KGCG---------------IEPDAITFVAVLSACS 625
           +AL LF +M                + C                ++PD +TFV VLSAC+
Sbjct: 425 KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACA 484

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            AGL+D+G   F  M Q++ I+P  EHY C+  +LGR G + +A + + E+  + +V+ +
Sbjct: 485 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVM-V 543

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W +LLG+C +H   EL  + A+++LEM+ ++     HVLLSN+YA    W+NV  VRK M
Sbjct: 544 WRALLGACVIHNDIELGRISAQRVLEMEPQDK--ATHVLLSNMYATAKRWDNVASVRKNM 601

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
           + +G++KE G SWI+  G V+ F   D  HP+   I  MLE L M+ + AG   I N NV
Sbjct: 602 KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAG--YIPNYNV 659



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/580 (24%), Positives = 273/580 (47%), Gaps = 62/580 (10%)

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           N  +I F       ++  L  +       +  +++ Y++ L+ C +      GK +HC  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC---KVFDTMRRRN 190
           ++       F +N LLNM                     Y K D +C   K+FD M  RN
Sbjct: 65  LKRGGCLDLFAWNILLNM---------------------YVKSDFLCDASKLFDEMPERN 103

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
            +++ T++  Y ++ R++EA+  F  + R G   +   F  +   L S    +    ++ 
Sbjct: 104 TISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHA 163

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            + KLG E  ++ FV ++ I  Y+  G  D AR++FD  L ++   W  M+  + +N+  
Sbjct: 164 CIFKLGHE--SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCF 221

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            EA++LF Q + +     ++ TF S   A   L+  D+G+ +H   +K+   L + V  A
Sbjct: 222 KEALKLFSQ-MRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVA 280

Query: 371 VIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +++                    +DV+ W+ MI+ + Q+    E + + ++M++   + +
Sbjct: 281 LLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFE 469
             T  ++L A + +   ++G Q H ++++ G+H +   S  L+D+YAK G ++ + ++F 
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFA 400

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
             +S  R+  TWN +I G+ Q G  E+A   F  MLE+ V    VT +S L AC  +  +
Sbjct: 401 --ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 458

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTT 584
           E G Q+H  +++   D+  FVG  ++   + +G+++     F  + + + +      YT 
Sbjct: 459 EPGLQIHSLTVKP--DKLTFVG--VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC 514

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           M+   G+ G  ++A+ L   +     +P  + + A+L AC
Sbjct: 515 MVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGAC 551



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 236/500 (47%), Gaps = 54/500 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +    T+ + T+I G+  +    EAI L+ ++ +       + + ++++LK  
Sbjct: 92  ASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREG--HELNPFVFTTILKLL 149

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             T    +G  +H    +     + FV  +L++ YS C                   + D
Sbjct: 150 VSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVC------------------GRVD 191

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +  +VFD +  +++V+W  +V+ + + + + EA++ F  M  +G +P+  +F +VF A  
Sbjct: 192 VAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACL 251

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L  +     V+G  +K  S Y  DL+V  + + +Y + G  D AR+ F+   +++   W
Sbjct: 252 GLEAFDVGKSVHGCALK--SRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPW 309

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + MI  Y Q++   EA+E+F Q+ +   ++ +  TF S L A + ++ L+LG Q+H ++I
Sbjct: 310 SFMIARYAQSDQSKEAVEMFFQMRQA-LVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K  +   V V NA+++                    R+ V+WNT+I   VQ G  ++ L 
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALR 428

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESYLIDMYA 456
           L   M +       VT ++ L A ++L   + G Q H+  ++   + F G    ++   A
Sbjct: 429 LFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVG----VLSACA 484

Query: 457 KSGLIKTARQIFEK--NDSG-DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
            +GL+   +  F     D G +     +  M+    + G L++   A + + E    P+V
Sbjct: 485 NAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDK---AVKLIDEIPFQPSV 541

Query: 514 VTIASVLPACNPMGNIELGK 533
           +   ++L AC    +IELG+
Sbjct: 542 MVWRALLGACVIHNDIELGR 561



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 176/343 (51%), Gaps = 38/343 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +AR++FD I     V W  ++  F  N+   EA+ L+SQM+        +N+T++S
Sbjct: 188 GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP--NNFTFAS 245

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V KAC       +GK+VH   ++       +V  +LL++Y+             K  ++D
Sbjct: 246 VFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYT-------------KSGDID 292

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            ++     + F+ + +++V+ W+ +++ Y ++++  EAV  F  M +  + P+  +F +V
Sbjct: 293 DAR-----RAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A +++      + ++  ++K+G    +D+FV+++ + +YA+ G  + + ++F     R
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLH--SDVFVSNALMDVYAKCGRMENSMELFAESPHR 405

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WNT+I G+VQ     +A+ LF+ +LE   +   +VT+ SAL A + L  L+ G Q+
Sbjct: 406 NDVTWNTVIVGHVQLGDGEKALRLFLNMLEY-RVQATEVTYSSALRACASLAALEPGLQI 464

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
           H+  +K                D +++  ++SA    GL D+G
Sbjct: 465 HSLTVKP---------------DKLTFVGVLSACANAGLLDQG 492


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 198/629 (31%), Positives = 327/629 (51%), Gaps = 30/629 (4%)

Query: 190  NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
            +V+ WN  +S +++     EAV  F  M+   +    ++FV +   ++ L   +    ++
Sbjct: 899  DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958

Query: 250  GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
            G++++ G + V  + V +  I MY + G    AR +F    E +   WNTMI G   +  
Sbjct: 959  GIVMRSGLDQV--VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGL 1016

Query: 310  PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIKNFVALPVIVL 368
               ++ +FV +L  D ++ D  T  S L A S L+    L  Q+HA  +K  V L   V 
Sbjct: 1017 EECSVGMFVHLLR-DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVS 1075

Query: 369  NAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
             A+I+                     D+ SWN ++  ++ +G   + L L   MQ+ G  
Sbjct: 1076 TALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135

Query: 409  IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
             D +T+     AA  L     GKQ HA +++ G + +  + S ++DMY K G +++AR++
Sbjct: 1136 SDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRV 1195

Query: 468  FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
            F +  S D     W  MI+G  +NG  E A   + QM    V P+  T A+++ AC+ + 
Sbjct: 1196 FSEIPSPD--DVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLT 1253

Query: 528  NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
             +E G+Q+H   ++     + FV TSL+DMY+K G I  A  +F +   +   ++  MI+
Sbjct: 1254 ALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIV 1313

Query: 588  GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
            G  QHG ++ AL  F+ MK  G+ PD +TF+ VLSACS++GLV E  + F  MQ+ Y I+
Sbjct: 1314 GLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIE 1373

Query: 648  PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
            P  EHY C+ D L R G++ EA + +  +  E +   ++ +LL +CR+    E  + VA+
Sbjct: 1374 PEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASA-SMYRTLLNACRVQVDRETGKRVAE 1432

Query: 708  KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNR 767
            KLL ++  +S    +VLLSN+YA    WENV   R  MR+  ++K+ G SW+D+   V+ 
Sbjct: 1433 KLLALEPSDSAA--YVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHL 1490

Query: 768  FASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F + D+ H ++  IY  +E +   +R  G
Sbjct: 1491 FVAGDRSHEETDVIYNKVEYIMKRIREEG 1519



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 186/767 (24%), Positives = 330/767 (43%), Gaps = 117/767 (15%)

Query: 8    LPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLS-------KICQEGRP----- 55
            L L     TA P  P+   IHSL      L+     S LS       +I   G       
Sbjct: 634  LRLRAATSTANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFV 693

Query: 56   --------------HLARQLFDSI--TRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKK 98
                            AR+LFD+   T    V WN I+     + +  ++   L+  +++
Sbjct: 694  TNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRR 753

Query: 99   SSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
            S    S   +T + V K C  + +    +++H + ++       FV  +L+N+       
Sbjct: 754  S--VVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNI------- 804

Query: 159  LDAEMVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
                          Y+K+ L+ +   +FD M  R+VV WN ++  YV T    EA+  F 
Sbjct: 805  --------------YAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFS 850

Query: 216  MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
               R G RP  ++   +   +    +         L +K    Y   L       FMY +
Sbjct: 851  EFHRTGFRPDDVTLRTLSRVVKCKKNI--------LELKQFKAYATKL-------FMYDD 895

Query: 276  LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
             G               +  VWN  +  ++Q     EA++ FV ++    +  D +TF+ 
Sbjct: 896  DGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMIN-SRVACDGLTFVV 940

Query: 336  ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
             L+ V+ L  L+LG+Q+H  ++++ +   V V N +I                    E D
Sbjct: 941  MLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVD 1000

Query: 376  VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ-DVGKQTH 434
            ++SWNTMIS    +GL++  + +   + +   + D  TV ++L A S+L     +  Q H
Sbjct: 1001 LISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIH 1060

Query: 435  AYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
            A  ++ G+  +  + + LID+Y+K G ++ A  +F   D    D A+WNA++ GY  +G 
Sbjct: 1061 ACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDG--FDLASWNAIMHGYIVSGD 1118

Query: 494  LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
              +A   +  M E     + +T+ +   A   +  ++ GKQ+H   ++   + ++FV + 
Sbjct: 1119 FPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSG 1178

Query: 554  LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
            ++DMY K G +  A  VF++IP  + V +TTMI G  ++G  E AL  +  M+   ++PD
Sbjct: 1179 VLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPD 1238

Query: 614  AITFVAVLSACSYAGLVDEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
              TF  ++ ACS    +++G QI  ++++      P       + DM  + G + +A   
Sbjct: 1239 EYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGL 1296

Query: 673  VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
             K        +  W +++     HG+++ A    K    M +R  MP
Sbjct: 1297 FKRTNTRR--IASWNAMIVGLAQHGNAKEALQFFKY---MKSRGVMP 1338



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 256/540 (47%), Gaps = 49/540 (9%)

Query: 71   VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
            ++WN  +  F+     +EA+  +  M  S    +CD  T+  +L   A    L +GK +H
Sbjct: 901  IVWNKALSRFLQRGEAWEAVDCFVDMINSR--VACDGLTFVVMLTVVAGLNCLELGKQIH 958

Query: 131  CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
               +R   +    V N L+NMY             +K   V  ++      VF  M   +
Sbjct: 959  GIVMRSGLDQVVSVGNCLINMY-------------VKAGSVSRAR-----SVFGQMNEVD 1000

Query: 191  VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL-GDYKSADVVY 249
            +++WNT++S    +     +V  F  +LR  + P   +  +V  A SSL G Y  A  ++
Sbjct: 1001 LISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIH 1060

Query: 250  GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
               +K G   V D FV+++ I +Y++ G  + A  +F N    +   WN ++ GY+ +  
Sbjct: 1061 ACAMKAG--VVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGD 1118

Query: 310  PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              +A+ L++ + E  E   D +T ++A  A   L  L  G+Q+HA ++K    L + V +
Sbjct: 1119 FPKALRLYILMQESGERS-DQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTS 1177

Query: 370  AVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
             V++                     D V+W TMIS  V+NG ++  L   ++M+      
Sbjct: 1178 GVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQP 1237

Query: 410  DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF 468
            D  T   L+ A S L   + G+Q HA +++    F+  + + L+DMYAK G I+ AR +F
Sbjct: 1238 DEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLF 1297

Query: 469  EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
            ++ ++  R  A+WNAMI G  Q+G  +EA   F+ M    V P+ VT   VL AC+  G 
Sbjct: 1298 KRTNT--RRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGL 1355

Query: 529  I-ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMI 586
            + E  +  +     Y ++  +   + L+D  S++G I  A  V + +P E ++  Y T++
Sbjct: 1356 VSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLL 1415



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 200/446 (44%), Gaps = 58/446 (13%)

Query: 51   QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
            + G    AR +F  +     + WNT+I G   + L   ++ ++  + + S     D +T 
Sbjct: 982  KAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLP--DQFTV 1039

Query: 111  SSVLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
            +SVL+AC+       +   +H   ++       FV  +L+++YS        +M   +++
Sbjct: 1040 ASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK-----RGKMEEAEFL 1094

Query: 170  EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
             V+   +DL              +WN I+  Y+ +  + +A+R + +M   G R   I+ 
Sbjct: 1095 FVNQDGFDL-------------ASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITL 1141

Query: 230  VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            VN   A   L   K    ++ ++VK G  +  DLFV S  + MY + G  + AR++F   
Sbjct: 1142 VNAAKAAGGLVGLKQGKQIHAVVVKRG--FNLDLFVTSGVLDMYLKCGEMESARRVFSEI 1199

Query: 290  LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
               +   W TMI G V+N     A+  + Q + L ++  D+ TF + + A S L  L+ G
Sbjct: 1200 PSPDDVAWTTMISGCVENGQEEHALFTYHQ-MRLSKVQPDEYTFATLVKACSLLTALEQG 1258

Query: 350  QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
            +Q+HA I+K   A    V+ ++++                    R + SWN MI    Q+
Sbjct: 1259 RQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQH 1318

Query: 390  GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY------LLRHGIH 443
            G   E L     M+ +G M D VT   +LSA S+      G  + AY         +GI 
Sbjct: 1319 GNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSH-----SGLVSEAYENFYSMQKNYGIE 1373

Query: 444  FEGMESY--LIDMYAKSGLIKTARQI 467
             E +E Y  L+D  +++G I+ A ++
Sbjct: 1374 PE-IEHYSCLVDALSRAGRIEEAEKV 1398



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 163/366 (44%), Gaps = 36/366 (9%)

Query: 73   WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
            WN I+ G++ +    +A+ LY  M++S   +  D  T  +  KA      L+ GK +H  
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERS--DQITLVNAAKAAGGLVGLKQGKQIHAV 1163

Query: 133  FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
             ++   N   FV + +L+MY  C      EM   +             +VF  +   + V
Sbjct: 1164 VVKRGFNLDLFVTSGVLDMYLKC-----GEMESAR-------------RVFSEIPSPDDV 1205

Query: 193  AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
            AW T++S  V+  +   A+  +  M    ++P   +F  +  A S L   +    ++  +
Sbjct: 1206 AWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANI 1265

Query: 253  VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
            VKL   +  D FV +S + MYA+ G  + AR +F     R    WN MI G  Q+ +  E
Sbjct: 1266 VKLNCAF--DPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKE 1323

Query: 313  AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
            A++ F + ++   ++ D VTF+  LSA S       G    AY  +NF ++     N  I
Sbjct: 1324 ALQFF-KYMKSRGVMPDRVTFIGVLSACSH-----SGLVSEAY--ENFYSMQK---NYGI 1372

Query: 373  ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            E ++  ++ ++ A  + G  +E   ++  M    F   +     LL+A     +++ GK+
Sbjct: 1373 EPEIEHYSCLVDALSRAGRIEEAEKVISSMP---FEASASMYRTLLNACRVQVDRETGKR 1429

Query: 433  THAYLL 438
                LL
Sbjct: 1430 VAEKLL 1435


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 190/568 (33%), Positives = 312/568 (54%), Gaps = 29/568 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ L++  G  + ND    +  I  Y  +     AR +F+   +R+   WN+MI  Y + 
Sbjct: 4   IHALILTTGL-FFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL------HAYIIKNFV 361
           N+P E + L+ +++  + I  D  TF   L A S L +LD+G+ +        Y    FV
Sbjct: 63  NYPDEVLNLYYRMIS-EGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFV 121

Query: 362 ALPV--------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
              V              IV + +++RDVVSW TMI+ F Q+G   + + +   MQK+  
Sbjct: 122 VSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERT 181

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
             D V +  L+ A ++L +   G   H +++R  ++ +  +++ LIDMYAK+G ++ A +
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASR 241

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +FE      +   +W A+I+G+ QNG   +   +  +M      P++V++ S L AC  +
Sbjct: 242 VFEGIPY--KSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQV 299

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           GN+++GK LHG  ++ L    V  GT+LIDMY+K G + +A  +F +I  ++ + +  MI
Sbjct: 300 GNLKVGKSLHGHIVKRLYLDKV-SGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMI 358

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
             YG HG    ALSLF  MK   I PD  TF ++LSACS++GLV+EG   F ++  + KI
Sbjct: 359 SSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKI 418

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           QPS +HY C+ D+L R G+V EAY+ ++ +  +   L IW +LL  C  H +  + E+VA
Sbjct: 419 QPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPG-LAIWVALLSGCLNHKNLLIGEMVA 477

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           KK+LE +  +   G +VL+SN ++    W++    RK M+  G+RK  G S ++V G + 
Sbjct: 478 KKILESNPDD--LGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQ 535

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRN 794
            F  +D+ H Q   I ++L+ L  EMR+
Sbjct: 536 AFLMEDKNHNQYQDILQILDILDNEMRS 563



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 224/475 (47%), Gaps = 51/475 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +F+ + + +   WN++II +   N P E + LY +M   S     D+ T++  LKAC
Sbjct: 37  ARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRM--ISEGIKPDSSTFTVTLKAC 94

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +   +L +G+ +    +        FV +S+LN+Y+                     K D
Sbjct: 95  SSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKS------------------GKMD 136

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VFD M +R+VV+W T+++ + ++ R ++A+  +R M +       +  V +  A +
Sbjct: 137 KAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACT 196

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SLGD K    V+G +V+   E   D  + +S I MYA+ G  + A ++F+    ++   W
Sbjct: 197 SLGDSKFGLSVHGHMVR--REMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISW 254

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVF--DDVTFLSALSAVSQLQELDLGQQLHAY 355
             +I G+ QN     A +    ++E+    F  D V+ +S+LSA +Q+  L +G+ LH +
Sbjct: 255 GALISGFAQNGF---ANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGH 311

Query: 356 IIKNF-------------------VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           I+K                     +     + + +  RD++ WN MIS++  +G   E L
Sbjct: 312 IVKRLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEAL 371

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK-QTHAYLLRHGIH-FEGMESYLIDM 454
            L  +M++     D  T  +LLSA S+    + G+   H  + +  I   E   + ++D+
Sbjct: 372 SLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDL 431

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG-YTQNGLLEEAFVAFRQMLEHN 508
            +++G ++ A Q+ E         A W A+++G      LL    VA +++LE N
Sbjct: 432 LSRAGQVEEAYQLIESMHI-KPGLAIWVALLSGCLNHKNLLIGEMVA-KKILESN 484



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 176/398 (44%), Gaps = 39/398 (9%)

Query: 42  IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
           + S L+   + G+   A+ +FD + +   V W T+I GF  +  P +AI +Y  M+K   
Sbjct: 122 VSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER- 180

Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
            T  D      +++AC    + + G +VH H +R   N    +  SL++MY+        
Sbjct: 181 -TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAK------- 232

Query: 162 EMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                        K +L  +VF+ +  ++V++W  ++S + +     + +     M   G
Sbjct: 233 -----------NGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSG 281

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
            +P  +S ++   A + +G+ K    ++G +VK       D    ++ I MYA+ G   F
Sbjct: 282 FKPDLVSLISSLSACAQVGNLKVGKSLHGHIVK---RLYLDKVSGTALIDMYAKCGALTF 338

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR +FD    R+  +WN MI  Y  +   +EA+ LF+++ E + I  D  TF S LSA S
Sbjct: 339 ARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETN-ITPDHATFASLLSACS 397

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
               ++ GQ              V++  + I+     +  M+    + G  +E   L+  
Sbjct: 398 HSGLVEEGQYW----------FHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIES 447

Query: 402 MQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
           M  K G  I      ALLS   N +N  +G+     +L
Sbjct: 448 MHIKPGLAI----WVALLSGCLNHKNLLIGEMVAKKIL 481


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/627 (29%), Positives = 328/627 (52%), Gaps = 33/627 (5%)

Query: 211 VRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           V +F R M ++GI  +  S+  +F    +LG      + +  L ++ +   ++ F+ +  
Sbjct: 76  VHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN---SNKFIDNCI 132

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           + MY +   F  A + FD  ++++   W+T+I  Y +     EA+ LF+++L+L  I  +
Sbjct: 133 LKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLG-ITPN 191

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV--------------------IVLN 369
              F + + + +    LDLG+Q+H+ +I+   A  +                    +  N
Sbjct: 192 SSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATN 251

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
            +  ++ V+   ++  + +   + + L+L  +M  +G  +D    + +L A + L +   
Sbjct: 252 KMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYT 311

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           GKQ H+Y ++ G+  E  + + L+D Y K    + ARQ FE     + +  +W+A+IAGY
Sbjct: 312 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH--EPNDFSWSALIAGY 369

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            Q+G  + A   F+ +    V  N     ++  AC+ + ++  G Q+H  +I+  L   +
Sbjct: 370 CQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYL 429

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
              +++I MYSK G ++YA   F  I + ++V +T +I  +  HG +  AL LF+ M+G 
Sbjct: 430 SGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGS 489

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           G+ P+A+TF+ +L+ACS++GLV EG +I D M  EY + P+ +HY C+ D+  R G + E
Sbjct: 490 GVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQE 549

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A E ++ L  E +V+  W SLLG C  H + E+  + A  +  +D  +S    +V++ N+
Sbjct: 550 ALEVIRSLPFEPDVMS-WKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSAT--YVIMFNL 606

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           YA  G W+   + RK M ER LRKEV CSWI V G V+RF   D+ HPQ+ +IY  L+ L
Sbjct: 607 YALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 666

Query: 789 AMEMRNAGNKTIQNSNV--DATPRFDE 813
               + +  + +   N   D T R ++
Sbjct: 667 NFSFKKSKERLLNEENALCDFTERKEQ 693



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 258/566 (45%), Gaps = 66/566 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y  + K C     L  GK  H    R  +N ++F+ N +L MY  C S   AE      
Sbjct: 94  SYEYLFKMCGTLGALSDGKLFHNRLQR-MANSNKFIDNCILKMYCDCKSFTSAE------ 146

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       + FD +  +++ +W+TI+S Y +  R  EAVR F  ML +GI P++  
Sbjct: 147 ------------RFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSI 194

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  +  + +          ++  L+++G  +  ++ + +    MY + G  D A    + 
Sbjct: 195 FSTLIMSFTDPSMLDLGKQIHSQLIRIG--FAANISIETLISNMYVKCGWLDGAEVATNK 252

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL----ELDEIVFDDVTFLSALSAVSQLQ 344
              +N      ++ GY +     +A+ LF +++    ELD  VF  +     L A + L 
Sbjct: 253 MTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSII-----LKACAALG 307

Query: 345 ELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMIS 384
           +L  G+Q+H+Y IK        V  P++                 ++ E +  SW+ +I+
Sbjct: 308 DLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIA 367

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IH 443
            + Q+G  D  L +   ++ +G +++S   T +  A S + +   G Q HA  ++ G + 
Sbjct: 368 GYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVA 427

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           +   ES +I MY+K G +  A Q F   D    D   W A+I  +  +G   EA   F++
Sbjct: 428 YLSGESAMISMYSKCGQVDYAHQAFLTIDKP--DTVAWTAIICAHAYHGKAFEALRLFKE 485

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M    V PN VT   +L AC+  G ++ GK+ L   S  Y ++  +     +ID+YS++G
Sbjct: 486 MQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAG 545

Query: 563 VINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE----RALSLFRSMKGCGIEP-DAIT 616
           ++  A  V   +P E + +++ +++ G   H   E     A ++FR      ++P D+ T
Sbjct: 546 LLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFR------LDPLDSAT 599

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQ 642
           +V + +  + AG  DE  Q   +M +
Sbjct: 600 YVIMFNLYALAGKWDEAAQFRKMMAE 625



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 130/548 (23%), Positives = 227/548 (41%), Gaps = 92/548 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKK--SSPYTSCDNYTYSSVLK 115
           A + FD I       W+TII  +       EA+ L+ +M     +P +S     +S+++ 
Sbjct: 145 AERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSS----IFSTLIM 200

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           +  +   L +GK +H   IR     +  +   + NMY  C   LD   V           
Sbjct: 201 SFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKC-GWLDGAEVAT--------- 250

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                   + M R+N VA   ++  Y K  R  +A+  F  M+  G+      F  +  A
Sbjct: 251 --------NKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKA 302

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            ++LGD  +   ++   +KLG E  +++ V +  +  Y +   F+ AR+ F++  E N  
Sbjct: 303 CAALGDLYTGKQIHSYCIKLGLE--SEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF 360

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ +I GY Q+     A+E+F + +    ++ +   + +   A S + +L  G Q+HA 
Sbjct: 361 SWSALIAGYCQSGQFDRALEVF-KAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHAD 419

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            IK  +   +   +A+I                    + D V+W  +I A   +G   E 
Sbjct: 420 AIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEA 479

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L  EMQ  G   ++VT   LL+A S+                                
Sbjct: 480 LRLFKEMQGSGVRPNAVTFIGLLNACSH-------------------------------- 507

Query: 456 AKSGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
             SGL+K  ++I +          T   +N MI  Y++ GLL+EA    R +      P+
Sbjct: 508 --SGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSL---PFEPD 562

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANV 570
           V++  S+L  C    N+E+G  +   +I  L  LD   +V   + ++Y+ +G  + AA  
Sbjct: 563 VMSWKSLLGGCWSHRNLEIG-MIAADNIFRLDPLDSATYV--IMFNLYALAGKWDEAAQF 619

Query: 571 FAKIPEKN 578
              + E+N
Sbjct: 620 RKMMAERN 627



 Score = 42.7 bits (99), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A Q F +I +P TV W  II     +   +EA+ L+ +M+ S      +  T+  
Sbjct: 443 GQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRP--NAVTFIG 500

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFS-NPSRFVYNSLLNMYS 153
           +L AC+ +  ++ GK +       +  NP+   YN ++++YS
Sbjct: 501 LLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYS 542


>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
 gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
 gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
 gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
 gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 681

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 213/721 (29%), Positives = 353/721 (48%), Gaps = 88/721 (12%)

Query: 87  YEAILLYSQMKKSSPYTSCDN---YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           ++A   +S ++  S     D+   ++ +S+L AC + R    G  VH H I      S  
Sbjct: 20  HDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCI-----SSGV 74

Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV---AWNTIVSW 200
            Y+S+L                +  +   YS ++L  +    +   +++    WN +++ 
Sbjct: 75  EYHSVL----------------VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIAS 118

Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
           Y K E + E +  ++ M+  GIRP   ++ +V  A     D     VV+G +    S Y 
Sbjct: 119 YAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV--SSYK 176

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           + L+V ++ I MY        AR++FD   ER+   WN +I  Y       EA ELF   
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELF--- 233

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
              D++ F  V                                         E  V++WN
Sbjct: 234 ---DKMWFSGV-----------------------------------------EVSVITWN 249

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +    +Q G     L L+  M+     +D V +   L A S +    +GK+ H   +  
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS 309

Query: 441 GIHFEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
              ++G+++    LI MY+K   ++ A  +F + +  +    TWN++I+GY Q    EEA
Sbjct: 310 S--YDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--ENSLCTWNSIISGYAQLNKSEEA 365

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLID 556
               R+ML     PN +T+AS+LP C  + N++ GK+ H + +R         +  SL+D
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           +Y+KSG I  A  V   + +++ VTYT++I GYG  G    AL+LF+ M   GI+PD +T
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485

Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
            VAVLSACS++ LV EG ++F  MQ EY I+P  +H+ C+ D+ GR G + +A + +  +
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
             + +    W +LL +C +HG++++ +  A+KLLEM   N  PGY+VL++N+YA  G+W 
Sbjct: 546 PYKPSG-ATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN--PGYYVLIANMYAAAGSWS 602

Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR-NA 795
            + +VR  MR+ G++K+ GC+WID     + F+  D   P++   Y +L+ L   M+ NA
Sbjct: 603 KLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNA 662

Query: 796 G 796
           G
Sbjct: 663 G 663


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 190/562 (33%), Positives = 319/562 (56%), Gaps = 37/562 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           ++F  ++ I  YA+    + A ++FD   + ++  +NT+I  Y +      A +LF   L
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF---L 129

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLG--QQLHAYIIKNFVALPVIVLNAVI------- 372
           E+ E   D   F   LS +     +++G  +QLHA  +   +   V V NA+I       
Sbjct: 130 EMREAFLDMDGF--TLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 373 --------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                         +RD VSWN+M+ A++Q+    + L L  EM  +G ++D  T+ ++L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAK-SGLIKTARQIFEKNDSGDR 476
           +A +N+++   G Q HA L++ G H    + S LID+Y+K  G +   R++F+  +  + 
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD--EISNP 305

Query: 477 DQATWNAMIAGYT-QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           D   WN MI+GY+    L +EA   FRQ+      P+  ++  V+ AC+ M +   G+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 536 HGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           HG +++  +  N + V  +LI MYSK G +  A  +F  +PE N+V+Y +MI GY QHGM
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
             ++L LF+ M   G  P  ITF++VL+AC++ G V++G   F++M+Q++ I+P   H+ 
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
           C+ D+LGR GK+ EA   ++ +  +      W +LLG+CR+HG+ ELA   A +LL++D 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFF-FWSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE 774
            N+ P  +V+L+NIY++ G  ++   VRK MR+RG++K+ GCSWI+V   ++ F ++D  
Sbjct: 545 LNAAP--YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF 602

Query: 775 HPQSHKIYEMLERLAMEMRNAG 796
           HP   KI E LE +  +++  G
Sbjct: 603 HPMIKKIQEYLEEMMRKIKKVG 624



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 174/695 (25%), Positives = 308/695 (44%), Gaps = 116/695 (16%)

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           + +   LK C   R+LR GK++H  +I+ F   S ++ N  L +YS C            
Sbjct: 9   HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKC------------ 56

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                  +     +VFD     NV ++NT++S Y K E YVE   Q   +     +P ++
Sbjct: 57  ------RRLSAARRVFDHTHDCNVFSFNTLISAYAK-ESYVEVAHQ---LFDEMPQPDSV 106

Query: 228 SFVNVFPALSSLGDYKSADVVY--------------------------GLLVKLGS---- 257
           S+  +  A +  GD + A  ++                          GL+ +L +    
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVV 166

Query: 258 ----EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVE 312
                YV+   V ++ I  Y++ G    AR+IF    E   EV WN+M+  Y+Q+    +
Sbjct: 167 TGLDSYVS---VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK 223

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI 366
           A+EL+++ + +  ++ D  T  S L+A + +Q+L  G Q HA +IK      + V   +I
Sbjct: 224 ALELYLE-MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282

Query: 367 ---------------VLNAVIERDVVSWNTMISAF-VQNGLDDEGLMLVYEMQKQGFMID 410
                          V + +   D+V WNTMIS + +   L DE L    ++Q  G   D
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPD 342

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYAKSGLIKTARQIF 468
             ++  ++SA SN+ +   G+Q H   L+  I  +   + + LI MY+K G ++ A+ +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +     + +  ++N+MIAGY Q+G+  ++   F++MLE   TP  +T  SVL AC   G 
Sbjct: 403 DTMP--EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGR 460

Query: 529 IELGK-QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +E GK   +    ++ ++      + +ID+  ++G ++ A  +   IP      + + +L
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALL 520

Query: 588 GYGQ-HGMSERALSLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE-Y 644
           G  + HG  E A+     +    ++P +A  +V + +  S  G + +   +  LM+    
Sbjct: 521 GACRIHGNVELAIKAANRL--LQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGV 578

Query: 645 KIQPSTE--------HYCCVADMLGRVGKVVEAY--EFVKELGEEGNVLEIWGSLLGS-- 692
           K +P           H     D    + K ++ Y  E ++++ + G   E+  +L+G   
Sbjct: 579 KKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDD 638

Query: 693 --------CRLHGHSELAEVVAKKLLEMDTRNSMP 719
                    RL  HS   E +A     M TR   P
Sbjct: 639 RVWQREEELRLGHHS---EKLAVSFGLMSTREGEP 670



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 220/488 (45%), Gaps = 54/488 (11%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   +E    +A QLFD + +P +V +NT+I  +        A  L+ +M+++  +   
Sbjct: 81  ISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA--FLDM 138

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY--NSLLNMYSTCLSSLDAEM 163
           D +T S ++ AC     + +G     H +   +    +V   N+L+  YS      +A  
Sbjct: 139 DGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           +   ++  D                R+ V+WN++V  Y++     +A+  +  M   G+ 
Sbjct: 195 I-FHWLSED----------------RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFA 282
               +  +V  A +++ D       +  L+K G  Y  +  V S  I +Y++  GC    
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSG--YHQNSHVGSGLIDLYSKCGGCMLDC 295

Query: 283 RKIFDNCLERNTEVWNTMIGGY-VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           RK+FD     +  +WNTMI GY +  +   EA+E F Q L++     DD + +  +SA S
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQ-LQVVGHRPDDCSLVCVISACS 354

Query: 342 QLQELDLGQQLHAYIIK-NFVALPVIVLNAVI--------------------ERDVVSWN 380
            +     G+Q+H   +K +  +  + V NA+I                    E + VS+N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LR 439
           +MI+ + Q+G+  + L L   M + GF   ++T  ++L+A ++    + GK     +  +
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQK 474

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            GI  E G  S +ID+  ++G +  A ++ E     D     W+A++     +G +E A 
Sbjct: 475 FGIEPEAGHFSCMIDLLGRAGKLSEAERLIE-TIPFDPGFFFWSALLGACRIHGNVELAI 533

Query: 499 VAFRQMLE 506
            A  ++L+
Sbjct: 534 KAANRLLQ 541



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 128/272 (47%), Gaps = 26/272 (9%)

Query: 59  RQLFDSITRPTTVIWNTIIIGF-VCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           R++FD I+ P  V+WNT+I G+ +  +L  EA+  + Q++        D+ +   V+ AC
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRP--DDCSLVCVISAC 353

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRF-VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           +   +   G+ VH   ++     +R  V N+L+ MYS C +  DA+              
Sbjct: 354 SNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAK-------------- 399

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +FDTM   N V++N++++ Y +     +++  F+ ML MG  P+ I+F++V  A 
Sbjct: 400 ----TLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAAC 455

Query: 237 SSLGDYKSADVVYGLLV-KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LERNT 294
           +  G  +   + + ++  K G E     F  S  I +    G    A ++ +    +   
Sbjct: 456 AHTGRVEDGKIYFNMMKQKFGIEPEAGHF--SCMIDLLGRAGKLSEAERLIETIPFDPGF 513

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
             W+ ++G    + +   AI+   ++L+LD +
Sbjct: 514 FFWSALLGACRIHGNVELAIKAANRLLQLDPL 545



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 21  PPQLPQIHSLSPP--IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P Q  Q+H L+    IP  +     + ++   + G    A+ LFD++    TV +N++I 
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIA 418

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           G+  + + ++++ L+ +M +     +  N T+ SVL ACA T  +  GK
Sbjct: 419 GYAQHGMGFQSLHLFQRMLEMGFTPT--NITFISVLAACAHTGRVEDGK 465


>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 203/621 (32%), Positives = 326/621 (52%), Gaps = 68/621 (10%)

Query: 236 LSSLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           LSS  D KS      ++G ++ LG E  + + V     F Y+       A  I +N    
Sbjct: 107 LSSCTDVKSLAEGRQLHGHIISLGFEQ-HPILVPKLVTF-YSAFNLLVDAHVITENSNIL 164

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I  YV+N    +A+  + Q+++   I  D+ T+ S L A  +  +L  G+++
Sbjct: 165 HPFPWNLLISSYVRNGFCQKALSAYKQMVK-KGIRPDNFTYPSVLKACGEELDLGFGKEV 223

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H  I  + +   +IV NA+I                    ERD VSWN+MIS +   G+ 
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283

Query: 393 DEG-----------------------------------LMLVYEMQKQGFMIDSVTVTAL 417
           +E                                    L L+ +M+K G  +DSV +   
Sbjct: 284 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIG 343

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L A S++ +  +GK+ H++ +R      + +++ LI MY++   +K A  +F+  ++  +
Sbjct: 344 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEA--K 401

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
              TWN++I+G       EEA    R+ML   + PN VTIASVLP C  + N++ GK+ H
Sbjct: 402 SLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFH 461

Query: 537 GFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
            +  R      ++ +  +L+DMY++SG +  A  VF  + E++ +TYT+MI GYG  G  
Sbjct: 462 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 521

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           + AL LF  M    I+PD IT +AVLSACS++GLV +G  +F+ M+  Y + P  EH+ C
Sbjct: 522 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 581

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           + D+ GR G + +A E ++ +  +     +W +L+G+CR+H ++E+ E  A+KLLEM   
Sbjct: 582 MTDLFGRAGLLNKAKEIIRNMPYKPTP-AMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 640

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           N  PGY+VL++N+YA  G W  + KVR  MR+ G+RK  GC+W+DVG   + F   D  +
Sbjct: 641 N--PGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSN 698

Query: 776 PQSHKIYEMLERLAMEMRNAG 796
             + +IY +LE L M M+ AG
Sbjct: 699 ANADEIYPLLEGLTMVMKEAG 719



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 129/544 (23%), Positives = 234/544 (43%), Gaps = 97/544 (17%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS+L +C + ++L  G+ +H H I         +   L+  YS                 
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSA---------------- 147

Query: 171 VDYSKYDLVCKVFDTMRRRNVV---AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                ++L+          N++    WN ++S YV+     +A+  ++ M++ GIRP   
Sbjct: 148 -----FNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNF 202

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN------DLFVASSAIFMYAELGCFDF 281
           ++ +V  A       +  D+ +G  V    E +N       L V ++ I MY + G    
Sbjct: 203 TYPSVLKACG-----EELDLGFGKEVH---ESINASRIKWSLIVHNALISMYGKCGKVGI 254

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF----VQVLELDEIVF--------- 328
           AR +FD   ER+   WN+MI  Y       EA ELF     + +EL+ I++         
Sbjct: 255 ARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLR 314

Query: 329 ---------------------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                                D V  +  L A S + +  LG+++H++ I++       V
Sbjct: 315 TGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTV 374

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            NA+I                     + +++WN++IS        +E   L+ EM   G 
Sbjct: 375 KNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGI 434

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTAR 465
             + VT+ ++L   + + N   GK+ H Y+ R     + +  +  L+DMYA+SG +  AR
Sbjct: 435 EPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEAR 494

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F+    G+RD+ T+ +MIAGY   G  + A   F +M    + P+ +T+ +VL AC+ 
Sbjct: 495 RVFDM--LGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSH 552

Query: 526 MGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            G +  G+ L       Y L  ++     + D++ ++G++N A  +   +P K +     
Sbjct: 553 SGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWA 612

Query: 585 MILG 588
            ++G
Sbjct: 613 TLIG 616



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 195/467 (41%), Gaps = 70/467 (14%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN +I  +V N    +A+  Y QM K       DN+TY SVLKAC E  +L  GK VH  
Sbjct: 169 WNLLISSYVRNGFCQKALSAYKQMVKKG--IRPDNFTYPSVLKACGEELDLGFGKEVHES 226

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR----- 187
                   S  V+N+L++MY  C     A  +  K  E D   ++ +  V+ +M      
Sbjct: 227 INASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEA 286

Query: 188 ------------RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                         N++ WNTI   Y++T  Y  A+     M + G    +++ +    A
Sbjct: 287 FELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGA 346

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S +GD K    ++   ++     V+   V ++ I MY+       A  +F     ++  
Sbjct: 347 CSHIGDAKLGKEIHSFAIRSCFGEVDT--VKNALITMYSRCKDLKHAYLLFQLMEAKSLI 404

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN++I G    +   EA  L  ++L L  I  + VT  S L   +++  L  G++ H Y
Sbjct: 405 TWNSIISGCCHMDRSEEASFLLREML-LFGIEPNYVTIASVLPLCARVANLQHGKEFHCY 463

Query: 356 IIK--NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
           + +  +F    +++ NA++                    ERD +++ +MI+ +   G   
Sbjct: 464 MTRREDFKD-HLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQ 522

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESY-- 450
             L L  EM       D +T+ A+LSA S           H+ L+  G + FE M S   
Sbjct: 523 AALKLFEEMNNFQIKPDHITMIAVLSACS-----------HSGLVTQGQLLFEKMRSLYG 571

Query: 451 ----------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                     + D++ ++GL+  A++I  +N       A W  +I  
Sbjct: 572 LTPHLEHFACMTDLFGRAGLLNKAKEII-RNMPYKPTPAMWATLIGA 617



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 148/335 (44%), Gaps = 45/335 (13%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK 470
           +++LLS+ +++++   G+Q H +++  G  FE    +   L+  Y+   L+  A  I E 
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLG--FEQHPILVPKLVTFYSAFNLLVDAHVITE- 159

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
            +S       WN +I+ Y +NG  ++A  A++QM++  + P+  T  SVL AC    ++ 
Sbjct: 160 -NSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 218

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK++H       +  ++ V  +LI MY K G +  A ++F KIPE+++V++ +MI  Y 
Sbjct: 219 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 278

Query: 591 QHGMSERALSLFRS-----------------------------------MKGCGIEPDAI 615
             GM   A  LF S                                   M+ CG   D++
Sbjct: 279 SMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSV 338

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
             +  L ACS+ G    G +I     +    +  T     +  M  R   +  AY   + 
Sbjct: 339 ALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALIT-MYSRCKDLKHAYLLFQL 397

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           +  E   L  W S++  C     SE A  + +++L
Sbjct: 398 M--EAKSLITWNSIISGCCHMDRSEEASFLLREML 430



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 183/431 (42%), Gaps = 41/431 (9%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEA 89
           IP+    +  S +S     G  + A +LF S+         +IWNTI  G++       A
Sbjct: 262 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGA 321

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSL 148
           + L SQM+K   +   D+      L AC+   + ++GK +H   IR CF      V N+L
Sbjct: 322 LELLSQMRKCGSHL--DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDT-VKNAL 378

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           + MYS C          LK+  +          +F  M  ++++ WN+I+S     +R  
Sbjct: 379 ITMYSRCKD--------LKHAYL----------LFQLMEAKSLITWNSIISGCCHMDRSE 420

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA    R ML  GI P+ ++  +V P  + + + +     +  + +   ++ + L + ++
Sbjct: 421 EASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR-EDFKDHLLLWNA 479

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + MYA  G    AR++FD   ER+   + +MI GY        A++LF ++    +I  
Sbjct: 480 LVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNF-QIKP 538

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           D +T ++ LSA S    +  GQ L   +   +   P           +  +  M   F +
Sbjct: 539 DHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP----------HLEHFACMTDLFGR 588

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            GL ++   ++  M    +         L+ A    RN ++G+     LL       G  
Sbjct: 589 AGLLNKAKEIIRNMP---YKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYY 645

Query: 449 SYLIDMYAKSG 459
             + +MYA +G
Sbjct: 646 VLIANMYAAAG 656


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 186/555 (33%), Positives = 294/555 (52%), Gaps = 70/555 (12%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W ++I  Y  +  P +++  F+ +L    +  D   F S L + + L +L+LG+ LH YI
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLA-SGLYPDHNVFPSVLKSCALLMDLNLGESLHGYI 132

Query: 357 IKNFVALPVIVLNAVI-------------------------------------------- 372
           I+  +   +   NA++                                            
Sbjct: 133 IRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSV 192

Query: 373 --------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                   E+D+VSWNT+I+   +NGL +E L ++ EM       DS T++++L   +  
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +   GK+ H   +R G+  +  + S LIDMYAK   +  + ++F      +RD  +WN+
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTL--LTERDGISWNS 310

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           +IAG  QNGL +E    FRQML   + P   + +S++PAC  +  + LGKQLHG+  R  
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
            D+N+F+ +SL+DMY+K G I  A  +F ++  ++ V++T MI+G   HG +  A+ LF 
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  GI+       AVL+ACS+ GLVDE  + F+ M +++ I P  EHY  V+D+LGR 
Sbjct: 431 QMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 483

Query: 664 GKVVEAYEFV--KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           G++ EAY+F+    +G  G+   IW +LL +CR+H + ++AE VA ++LE+D  N+  G 
Sbjct: 484 GRLEEAYDFICGMHIGPTGS---IWATLLSACRVHKNIDMAEKVANRILEVDPNNT--GA 538

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           ++LL+NIY+    W+   K R  MR  G+RK   CSWI+V   V  F + D+ HP   KI
Sbjct: 539 YILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKI 598

Query: 782 YEMLERLAMEMRNAG 796
            E +E L   M   G
Sbjct: 599 REAMEVLVELMEKEG 613



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 46/402 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H + +LF++I  P  + W ++I  +  + LP++++  +  M  S  Y   D+  + SVLK
Sbjct: 57  HDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYP--DHNVFPSVLK 114

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSLDAEMVGLKYV---- 169
           +CA   +L +G+++H + IR   +   +  N+L+NMYS    L     + +G   V    
Sbjct: 115 SCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEM 174

Query: 170 --------EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
                    V     D V K+F+ M  +++V+WNTI++   +   Y E +R  R M    
Sbjct: 175 TERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGAN 234

Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ++P + +  +V P ++   D      ++G  ++ G +   D++VASS I MYA+      
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLD--ADIYVASSLIDMYAKCTRVAD 292

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           + ++F    ER+   WN++I G VQN    E +  F Q+L + +I     +F S + A +
Sbjct: 293 SCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQML-MAKIKPKSYSFSSIMPACA 351

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNT 381
            L  L LG+QLH YI +N      F+A  ++              + + +  RD+VSW  
Sbjct: 352 HLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTA 411

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
           MI     +G   + + L  +M+ +G       + A+L+A S+
Sbjct: 412 MIMGCALHGQAPDAIELFEQMETEG-------IKAVLTACSH 446



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 184/403 (45%), Gaps = 57/403 (14%)

Query: 349 GQQLHAYIIK-------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
            QQLHA ++K                   N +   + + N +     ++W ++I  +  +
Sbjct: 25  AQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           GL  + L     M   G   D     ++L + + L + ++G+  H Y++R G+ F+    
Sbjct: 85  GLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144

Query: 449 SYLIDMYAKSGLIK--------------------------------TARQIFEKNDSGDR 476
           + L++MY+K   ++                                + R+IFE     ++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP--EK 202

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WN +IAG  +NGL EE     R+M   N+ P+  T++SVLP      +I  GK++H
Sbjct: 203 DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
           G SIR  LD +++V +SLIDMY+K   +  +  VF  + E++ +++ ++I G  Q+G+ +
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD 322

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
             L  FR M    I+P + +F +++ AC++   +  G Q+   + +      +      +
Sbjct: 323 EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSL 381

Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
            DM  + G +  A +    +     V   W +++  C LHG +
Sbjct: 382 VDMYAKCGNIRTAKQIFDRMRLRDMV--SWTAMIMGCALHGQA 422



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 185/403 (45%), Gaps = 65/403 (16%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F+T+     +AW +++  Y       +++  F  ML  G+ P    F +V  + + L 
Sbjct: 61  RLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLM 120

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--------------------- 279
           D    + ++G ++++G ++  DL+  ++ + MY++L                        
Sbjct: 121 DLNLGESLHGYIIRVGLDF--DLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERT 178

Query: 280 -----------DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
                      D  RKIF+   E++   WNT+I G  +N    E + + ++ +    +  
Sbjct: 179 RSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM-IREMGGANLKP 237

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------------VL 368
           D  T  S L  +++  ++  G+++H   I+       +VA  +I              V 
Sbjct: 238 DSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVF 297

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
             + ERD +SWN++I+  VQNGL DEGL    +M        S + ++++ A ++L    
Sbjct: 298 TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357

Query: 429 VGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +GKQ H Y+ R+G      + S L+DMYAK G I+TA+QIF++     RD  +W AMI G
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRL--RDMVSWTAMIMG 415

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
              +G   +A   F QM           I +VL AC+  G ++
Sbjct: 416 CALHGQAPDAIELFEQM-------ETEGIKAVLTACSHGGLVD 451



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 37/316 (11%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
           V ALL    +++++   +Q HA +L+         S L+ +Y+   L+  + ++F  N  
Sbjct: 9   VKALLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLF--NTI 66

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                  W ++I  YT +GL  ++  +F  ML   + P+     SVL +C  + ++ LG+
Sbjct: 67  HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGE 126

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSK------SGVINYAA------------------- 568
            LHG+ IR  LD +++ G +L++MYSK      SG     A                   
Sbjct: 127 SLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSV 186

Query: 569 -------NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
                   +F  +PEK+ V++ T+I G  ++G+ E  L + R M G  ++PD+ T  +VL
Sbjct: 187 LSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL 246

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
              +    +  G +I     ++  +         + DM  +  +V ++      L E   
Sbjct: 247 PLIAENVDISRGKEIHGCSIRQ-GLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDG 305

Query: 682 VLEIWGSLLGSCRLHG 697
           +   W S++  C  +G
Sbjct: 306 I--SWNSIIAGCVQNG 319


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/569 (31%), Positives = 293/569 (51%), Gaps = 61/569 (10%)

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++F +  ER+   +N +I G+     P  +++L+  +L  + +    +T  + +   S L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159

Query: 344 QELDLGQQLHAYIIK------NFVALPVIVLNA--------------------------- 370
            +  LG  +H  +++       FV  P++ + A                           
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLI 219

Query: 371 ------------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                             +++RD ++W TM++   QNGL  E L +   M+ +G  ID  
Sbjct: 220 TGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQY 279

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFE 469
           T  ++L+A   L   + GKQ HAY+ R       F G  S L+DMY+K   I+ A  +F 
Sbjct: 280 TFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVG--SALVDMYSKCRSIRLAEAVFR 337

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           +     R+  +W AMI GY QN   EEA  AF +M    + P+  T+ SV+ +C  + ++
Sbjct: 338 RMTC--RNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E G Q H  ++   L + + V  +L+ +Y K G I  A  +F ++   + V++T ++ GY
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            Q G ++  + LF  M   G++PD +TF+ VLSACS AGLV++G   FD MQ+++ I P 
Sbjct: 456 AQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPI 515

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ D+  R G+  EA EF+K++    +    W +LL SCRL G+ E+ +  A+ L
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFG-WATLLSSCRLRGNMEIGKWAAENL 574

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
           LE D +N  P  +VLL +++A +G W  V  +R+ MR+R ++KE GCSWI     V+ F+
Sbjct: 575 LETDPQN--PASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 632

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           + DQ HP S +IYE LE L  +M   G K
Sbjct: 633 ADDQSHPFSSRIYEKLEWLNSKMAEEGYK 661



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 246/542 (45%), Gaps = 84/542 (15%)

Query: 110 YSSVLKACAET---RNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           Y+++L + A       +R+  AVHC  ++ F   P  F+ N LL  Y+       A  V 
Sbjct: 12  YAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVF 71

Query: 166 LKYVEVD-YSKYDLVC------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
            +  + + +++  L+             ++F +M  R+ V++N +++ +  T     +V+
Sbjct: 72  DEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQ 131

Query: 213 QFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
            +R +LR   +RP+ I+   +    S+L D      V+  +++LG  +    FV S  + 
Sbjct: 132 LYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLG--FGAYAFVGSPLVD 189

Query: 272 MYAELGCFDFARKIFD------------------NC-------------LERNTEVWNTM 300
           MYA++G    AR++F                    C             ++R++  W TM
Sbjct: 190 MYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTM 249

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + G  QN   +EA+++F + +  + +  D  TF S L+A   L   + G+Q+HAYI + +
Sbjct: 250 VTGLTQNGLQLEALDVFRR-MRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTW 308

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
               V V +A+++                    R+++SW  MI  + QN   +E +    
Sbjct: 309 YEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFS 368

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSG 459
           EMQ  G   D  T+ +++S+ +NL + + G Q H   L  G+  +  + + L+ +Y K G
Sbjct: 369 EMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I+ A ++F++      DQ +W A++ GY Q G  +E    F +ML + + P+ VT   V
Sbjct: 429 SIEDAHRLFDEMSF--HDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGV 486

Query: 520 LPACNPMGNIELG-----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           L AC+  G +E G            I  + D      T +ID+YS+SG    A     ++
Sbjct: 487 LSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHY----TCMIDLYSRSGRFKEAEEFIKQM 542

Query: 575 PE 576
           P 
Sbjct: 543 PH 544



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 120/513 (23%), Positives = 209/513 (40%), Gaps = 83/513 (16%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           +LF S+     V +N +I GF     P  ++ LY  + +          T S+++   + 
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRP-TRITLSAMIMVASA 158

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD-- 177
             +  +G +VHC  +R       FV + L++MY+      DA  V  +        Y+  
Sbjct: 159 LSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTL 218

Query: 178 ----LVCK-------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               L CK       +F  M  R+ + W T+V+   +    +EA+  FR M   G+    
Sbjct: 219 ITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQ 278

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F ++  A  +L   +    ++  + +  + Y +++FV S+ + MY++      A  +F
Sbjct: 279 YTFGSILTACGALAASEEGKQIHAYITR--TWYEDNVFVGSALVDMYSKCRSIRLAEAVF 336

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                RN   W  MI GY QN    EA+  F + +++D I  DD T  S +S+ + L  L
Sbjct: 337 RRMTCRNIISWTAMIVGYGQNACSEEAVRAFSE-MQMDGIKPDDFTLGSVISSCANLASL 395

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G Q H   + + +   + V NA++                      D VSW  +++ +
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q G   E + L  +M   G   D VT   +LSA S                        
Sbjct: 456 AQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACS------------------------ 491

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT------WNAMIAGYTQNGLLEEAFVA 500
                     ++GL++     F   DS  +D         +  MI  Y+++G  +EA   
Sbjct: 492 ----------RAGLVEKGCDYF---DSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            +QM     +P+    A++L +C   GN+E+GK
Sbjct: 539 IKQMPH---SPDAFGWATLLSSCRLRGNMEIGK 568



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 171/402 (42%), Gaps = 36/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ LF  +    ++ W T++ G   N L  EA+ ++ +M+        D YT+ S+L AC
Sbjct: 231 AKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG--VGIDQYTFGSILTAC 288

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                   GK +H +  R +   + FV ++L++MYS C S   AE               
Sbjct: 289 GALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE--------------- 333

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF  M  RN+++W  ++  Y +     EAVR F  M   GI+P   +  +V  + +
Sbjct: 334 ---AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCA 390

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   +     + L   L S  +  + V+++ + +Y + G  + A ++FD     +   W
Sbjct: 391 NLASLEEGAQFHCL--ALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 448

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GY Q     E I+LF ++L ++ +  D VTF+  LSA S+   ++ G      + 
Sbjct: 449 TALVTGYAQFGKAKETIDLFEKML-VNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQ 507

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           K+   +P+             +  MI  + ++G   E    + +M       D+     L
Sbjct: 508 KDHDIVPID----------DHYTCMIDLYSRSGRFKEAEEFIKQMPHSP---DAFGWATL 554

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           LS+     N ++GK     LL            L  M+A  G
Sbjct: 555 LSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKG 596



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 61/249 (24%)

Query: 449 SYLIDMYAKSGLIKTARQIFEK-----------------------------NDSGDRDQA 479
           ++L+  YAKSG +  AR++F++                                 +RD  
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           ++NA+I G++  G    +   +R +L E +V P  +T+++++   + + +  LG  +H  
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP----------------------- 575
            +R       FVG+ L+DMY+K G+I  A  VF ++                        
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231

Query: 576 --------EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
                   +++S+T+TTM+ G  Q+G+   AL +FR M+  G+  D  TF ++L+AC   
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 628 GLVDEGLQI 636
              +EG QI
Sbjct: 292 AASEEGKQI 300



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 35/209 (16%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           LA  +F  +T    + W  +I+G+  N    EA+  +S+M+        D++T  SV+ +
Sbjct: 331 LAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDG--IKPDDFTLGSVISS 388

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRF--VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           CA   +L  G   HC  +   S   R+  V N+L+ +Y  C S  DA             
Sbjct: 389 CANLASLEEGAQFHC--LALVSGLMRYITVSNALVTLYGKCGSIEDAH------------ 434

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 ++FD M   + V+W  +V+ Y +  +  E +  F  ML  G++P  ++F+ V  
Sbjct: 435 ------RLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLS 488

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           A S  G           LV+ G +Y + +
Sbjct: 489 ACSRAG-----------LVEKGCDYFDSM 506



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 16/153 (10%)

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D N+F   +L+   + S ++     +FA +PE+++V+Y  +I G+   G   R++ L+R+
Sbjct: 76  DPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRA 135

Query: 605 -MKGCGIEPDAITFVAVLSACSYAGLVDEGL------QIFDLMQQEYKIQPSTEHYCCVA 657
            ++   + P  IT  A++   S   L D  L      Q+  L    Y    S      + 
Sbjct: 136 LLREESVRPTRITLSAMIMVAS--ALSDRALGHSVHCQVLRLGFGAYAFVGSP-----LV 188

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
           DM  ++G + +A    +E+  E   + ++ +L+
Sbjct: 189 DMYAKMGLIRDARRVFQEM--EAKTVVMYNTLI 219


>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 193/565 (34%), Positives = 313/565 (55%), Gaps = 41/565 (7%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+A+  IF YA       +R +FD+   +N  +WN++I G V+N    EA +LF Q+   
Sbjct: 59  FLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSS 118

Query: 324 DEIVFDDVTFLSALSAVS-QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
           D ++ DD T LS LS VS +L  L  G+ +H   I+       +V N+++          
Sbjct: 119 D-VLPDDFT-LSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFD 176

Query: 374 -----------RDVVSWNTMISAFVQNG---LDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                      R+  SWN +I+ +  +G     +E    V +MQ      D+ T+++LL 
Sbjct: 177 ESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP 236

Query: 420 AA-SNLRNQDVGKQTHAYLLRHGIHFEGMES------YLIDMYAKSGLIKTARQIFEKND 472
               ++   D G++ H Y++++ +   G++S       LIDMY++S  +   R++F++  
Sbjct: 237 LCDGDMGKWDYGRELHCYIVKNELVL-GLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMK 295

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIEL 531
              R+  +W AMI GY +NG  +EA   FR M +   V PN V++ SVLPAC+    +  
Sbjct: 296 C--RNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLS 353

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNSVTYTTMILGYG 590
           G+Q+HGF++R  L+  V +  +LIDMYSK G ++ A  VF      K+++++++MI GYG
Sbjct: 354 GRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYG 413

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG  + A+ L+  M   GI PD IT V +LSAC  +GLV+EGL I+  +  +Y I+P+ 
Sbjct: 414 LHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTL 473

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           E   C+ DMLGR G++  A +F+K +  E     +WG+L+    +HG  E+ E+  + L+
Sbjct: 474 EICACIVDMLGRAGQLDRALDFIKAIPVEPGP-SVWGALVSCSIIHGDLEMQELAYRFLI 532

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           +++ +N  P  +V +SN+YA    W+ V +VR+ M+++ LRK  GCSWI +    + F  
Sbjct: 533 QLEPKN--PSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYV 590

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNA 795
            D+ HP S  IY ML+ L + M +A
Sbjct: 591 ADKAHPSSTSIYNMLDDLLLTMNDA 615



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 231/510 (45%), Gaps = 70/510 (13%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           ICQ   P+ +R +FDS+      +WN++I G V N L  EA  L++QM  S      D++
Sbjct: 70  ICQH--PYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLP--DDF 125

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T S++ K  +E   L  GK++H   IR        V NS+++MY  C             
Sbjct: 126 TLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKC------------- 172

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER--YVEAVRQFRMMLRMG-IRPS 225
                  +D   KVFD M  RN  +WN +++ Y  +    + E   +F   ++M  +RP 
Sbjct: 173 -----GNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPD 227

Query: 226 TISFVNVFPALSS-LGDYKSADVVYGLLVK----LGSEYVNDLFVASSAIFMYAELGCFD 280
             +  ++ P     +G +     ++  +VK    LG +  +D+ +    I MY+      
Sbjct: 228 AYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLD--SDVHLGCCLIDMYSRSNKVV 285

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             R++FD    RN   W  MI GYV+N    EA+ LF  +  +D +  + V+ +S L A 
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPAC 345

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSW 379
           S    L  G+Q+H + ++  +   V + NA+I+                     +D +SW
Sbjct: 346 SSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISW 405

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA--SNLRNQDVGKQTHAYL 437
           ++MIS +  +G   E ++L  +M + G   D +T   +LSA   S L N+ +   +    
Sbjct: 406 SSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSV-- 463

Query: 438 LRHGIHFEGMESYL------IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
               I+  G+E  L      +DM  ++G +  A   F K    +   + W A+++    +
Sbjct: 464 ----INDYGIEPTLEICACIVDMLGRAGQLDRALD-FIKAIPVEPGPSVWGALVSCSIIH 518

Query: 492 GLLEEAFVAFRQM--LEHNVTPNVVTIASV 519
           G LE   +A+R +  LE     N V+I+++
Sbjct: 519 GDLEMQELAYRFLIQLEPKNPSNYVSISNL 548



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 33/344 (9%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN---NLPYEAILLYSQ 95
           T    S +S  C+ G    +R++FD +T   +  WN +I G+  +   N   E      Q
Sbjct: 159 TVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218

Query: 96  MKKSSPYTSCDNYTYSSVLKAC-AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
           M+        D YT SS+L  C  +      G+ +HC+ ++          N L      
Sbjct: 219 MQMDEVRP--DAYTISSLLPLCDGDMGKWDYGRELHCYIVK----------NEL------ 260

Query: 155 CLSSLDAEMVGLKYVEVD-YSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            +  LD++ V L    +D YS+ + V    +VFD M+ RNV +W  +++ YV+     EA
Sbjct: 261 -VLGLDSD-VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEA 318

Query: 211 VRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           +  FR M +  G+ P+ +S V+V PA SS     S   ++G  V+   E  N++ + ++ 
Sbjct: 319 LSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR--KELNNEVSLCNAL 376

Query: 270 IFMYAELGCFDFARKIF-DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
           I MY++ G  D AR++F D+ L ++   W++MI GY  +    EAI L+ ++L+   I  
Sbjct: 377 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAG-IRP 435

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           D +T +  LSA  +   ++ G  +++ +I ++   P + + A I
Sbjct: 436 DMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACI 479


>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 200/636 (31%), Positives = 335/636 (52%), Gaps = 48/636 (7%)

Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADV 247
           R+  ++NTI+S    T    +A+     MLR G +RP  I+F       +  G+ +    
Sbjct: 122 RDTSSYNTILS---ATPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQ 178

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ L+ + G     D+FV ++ +  YA     D ARK+F+    R+   WN ++ G  Q+
Sbjct: 179 LHALVSRAG--IAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQD 236

Query: 308 NH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI 366
              P E I +F+++L+   +  D ++  S +SA     +L+LG+Q+H + +K  +   V 
Sbjct: 237 GECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVS 296

Query: 367 VLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE-MQKQ 405
           + N ++                    ERDVVSW T++S      +D E  + ++  M + 
Sbjct: 297 IANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMS------MDREDAVSLFNGMMRD 350

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
           G   + VT  A+LSA         G+  HA  ++ G+  +    +  I MYAK   +  A
Sbjct: 351 GVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDA 410

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           + IF        +   WNA+I+GY QN + ++A  AF  M++    P+  T AS+L A  
Sbjct: 411 KMIFGLMP--HPEVIAWNALISGYAQNEMCQDALEAFLSMVK-ITKPSETTFASILSAVT 467

Query: 525 PMGNIEL--GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
            +  + +  G+  H  +++  L  + +V  +LID+Y+K G +  +   F +   ++ + +
Sbjct: 468 AVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAW 527

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           T +I    +HG  +  +SLF  M   G+ PD +  ++VL+AC Y+G    G +IF+ M  
Sbjct: 528 TAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMAT 587

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++  +   EHY CV DMLGR G++ EA E + ++   G  +    SLLG+CR+HG++++ 
Sbjct: 588 KHGAELWPEHYACVVDMLGRAGRLEEAEELMLQM-PSGPSVSAMQSLLGACRIHGNTDVG 646

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
           E VA  LLE +   S  G +VLLSNIYAE+G+W  V +VR++MR  G++KEVG SW+D G
Sbjct: 647 ERVAGVLLETEPTES--GAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEVGFSWVDAG 704

Query: 763 G-----YVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           G     ++++F+S D  HPQ  +IY + E L  EM+
Sbjct: 705 GANDSLHLHKFSSDDTTHPQREEIYRVAEGLGWEMK 740



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 43/308 (13%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G P  AR+LF+ +     V W T++     +    +A+ L++ M +     + +  T+ +
Sbjct: 309 GTPGCARRLFEFMGERDVVSWTTVM-----SMDREDAVSLFNGMMRDG--VAPNEVTFVA 361

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L A       R G+ VH   I+   +      NS + MY+      DA+M         
Sbjct: 362 ILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKM--------- 412

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F  M    V+AWN ++S Y + E   +A+  F  M+++  +PS  +F ++
Sbjct: 413 ---------IFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKI-TKPSETTFASI 462

Query: 233 FPALSSLGDYKSADVVYGLL-----VKLG---SEYVNDLFVASSAIFMYAELGCFDFARK 284
             A++++   ++  + YG +     +KLG   SEYV+        I +YA+ G  + + K
Sbjct: 463 LSAVTAV---ETVSMAYGQMYHCQTLKLGLGASEYVSGAL-----IDLYAKRGSLEESWK 514

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
            F   + R+   W  +I    ++ +    + LF  +     +  D V  LS L+A     
Sbjct: 515 AFGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMAR-SGVTPDGVVLLSVLTACRYSG 573

Query: 345 ELDLGQQL 352
              LG+++
Sbjct: 574 FASLGREI 581


>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 233/777 (29%), Positives = 368/777 (47%), Gaps = 118/777 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y  +L+ C   R+L  G+ +H   ++   F   ++++   LL  Y+ C    DA      
Sbjct: 33  YGEILQGCVYERDLCTGQQIHARILKNGDFYARNQYIETKLLIFYAKC----DA------ 82

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
            +EV  +       +F  +R RNV +W  I+    +      A+  F  M+  G+ P   
Sbjct: 83  -IEVAQN-------LFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNY 134

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              NV  A  +L        V+G LVK G    + +FVASS   MY + G  + ARK+FD
Sbjct: 135 VVPNVCKACGALQWTWFGRGVHGYLVKAGLH--DCVFVASSLADMYGKCGVLNDARKVFD 192

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN ++ GYVQN    EAI L    +  + I    VT  + LSA + ++ ++
Sbjct: 193 KIPERNVVAWNALMVGYVQNGMNEEAIRLLSD-MRKEGIEPTRVTVSTCLSASANIRGIE 251

Query: 348 LGQQLHAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFV 387
            G+Q HA  I N                     V    ++ + +IE+DVV+WN +IS +V
Sbjct: 252 EGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYV 311

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-G 446
           Q GL D+ + +   M+ +    DSVT++ L+SAA+   N  +GK+   Y +RH    E  
Sbjct: 312 QQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIV 371

Query: 447 MESYLIDM-------------------------------YAKSGLIKTARQIFEKND--- 472
           + S  +DM                               YA SGL   A ++F       
Sbjct: 372 LASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLES 431

Query: 473 -----------------SGDRDQA-----------------TWNAMIAGYTQNGLLEEAF 498
                            +G  D+A                 +W  M+ G  QNG  EEA 
Sbjct: 432 VPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAI 491

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDM 557
              R+M E  + PN  +I   L AC  + ++  G+ +HG+ IR L    +V   TSL+DM
Sbjct: 492 NFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDM 551

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G IN A   F          Y  MI  Y  +G  + A++L+R ++   I+PD+ITF
Sbjct: 552 YAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITF 611

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            ++LSACS+AG + + + IF  M  ++ ++P  EHY  + D+L   G+  +A E +KE+ 
Sbjct: 612 TSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELIKEMP 671

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +   I  SL+ S      +EL + ++K+LLE +  NS  G +V +SN +A EG+W+ 
Sbjct: 672 YKPDARMI-QSLVASNNKQHKTELVDYLSKQLLESEPENS--GNYVTISNAFAIEGSWDE 728

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGY--VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           V K+R+ M+ +GL+K+ GCSWI + G   V+ F + D+ H ++ +I  +L  L  ++
Sbjct: 729 VVKMREMMKAKGLKKKPGCSWIQIKGEXGVHLFVANDKTHIKNDEIQRILALLLYDL 785



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 256/504 (50%), Gaps = 25/504 (4%)

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           VS   K     EA+R  + M    +R     +  +        D  +   ++  ++K G 
Sbjct: 2   VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            Y  + ++ +  +  YA+    + A+ +F     RN   W  +IG   +      A+  F
Sbjct: 62  FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGF 121

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----- 366
           V+++E + ++ D+    +   A   LQ    G+ +H Y++K       FVA  +      
Sbjct: 122 VEMIE-NGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGK 180

Query: 367 ---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                    V + + ER+VV+WN ++  +VQNG+++E + L+ +M+K+G     VTV+  
Sbjct: 181 CGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTC 240

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           LSA++N+R  + GKQ+HA  + +G+  +  + + +++ Y K GL++ A  IF++    ++
Sbjct: 241 LSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMI--EK 298

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  TWN +I+GY Q GL+++A    + M   N+  + VT+++++ A     N++LGK++ 
Sbjct: 299 DVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQ 358

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSE 596
            + IR+  +  + + ++ +DMY+K G I  A  VF    EK+ + + T++  Y   G+S 
Sbjct: 359 CYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSG 418

Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
            AL LF  M+   + P+ IT+ +++ +    G VDE  ++F L  Q   I P+   +  +
Sbjct: 419 EALRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMF-LQMQSSGIFPNLISWTTM 477

Query: 657 ADMLGRVGKVVEAYEFVKELGEEG 680
            + L + G   EA  F++++ E G
Sbjct: 478 MNGLVQNGCSEEAINFLRKMQESG 501



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 203/454 (44%), Gaps = 85/454 (18%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+  +   
Sbjct: 274 SILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLEN--L 331

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAE 162
             D+ T S+++ A A T NL++GK V C+ IR CF +    + ++ ++MY+ C S +DA+
Sbjct: 332 RYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEI-VLASTAVDMYAKCGSIVDAK 390

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                             KVFD+   ++++ WNT+++ Y  +    EA+R F  M    +
Sbjct: 391 ------------------KVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESV 432

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P+ I++ ++  +L   G    A  ++             L + SS IF           
Sbjct: 433 PPNMITWNSIILSLLRNGQVDEAKEMF-------------LQMQSSGIF----------- 468

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
                     N   W TM+ G VQN    EAI  F++ ++   +  +  +   ALSA + 
Sbjct: 469 ---------PNLISWTTMMNGLVQNGCSEEAIN-FLRKMQESGLRPNSFSITVALSACAH 518

Query: 343 LQELDLGQQLHAYIIKN--------FVALPVIV-------------LNAVIERDVVSWNT 381
           L  L+ G+ +H YII+N        FV   V +               + +  ++  +N 
Sbjct: 519 LASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNA 578

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY---LL 438
           MISA+   G   E + L   ++      DS+T T+LLSA S+    D+ +  + +   + 
Sbjct: 579 MISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHA--GDIVQAINIFTEMVS 636

Query: 439 RHGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           +HG+    +E Y  ++D+ A SG    A ++ ++
Sbjct: 637 KHGMK-PCLEHYGLMVDLLASSGETNKALELIKE 669


>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
          Length = 820

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 213/762 (27%), Positives = 369/762 (48%), Gaps = 84/762 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
            +A  LF  +       W   IIG  C   L   A++ + +M ++  +   DN+   +V 
Sbjct: 113 EIAEVLFSKLRVRNVFSW-AAIIGVKCRMGLCEGALMGFVEMLENEIFP--DNFVVPNVF 169

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           KAC   +  R G+ VH + ++       FV +SL +MY  C    DA             
Sbjct: 170 KACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDAR------------ 217

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVFD +  RNVVAWN ++  YV+     EA+R    M + G+ P+ ++      
Sbjct: 218 ------KVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLS 271

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A +++   +     + + +  G E  N   + +S +  Y ++G  ++A  IFD   E++ 
Sbjct: 272 ASANMAGVEEGTQCHAIAIVNGLELDN--ILGTSLLNFYCKVGLIEYAEMIFDRMFEKDV 329

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN +I GYVQ     +AI +  Q++ L+++ +D VT  + +SA ++ + L LG+++  
Sbjct: 330 VTWNLLISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 388

Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
              ++ +   ++                    V ++ +E+D++ WNT+++A+ ++G   E
Sbjct: 389 XCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGE 448

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L YEMQ +    + +T   ++   S LRN +V +    +L    +   G+   LI  
Sbjct: 449 ALRLFYEMQLESVPPNVITWNLII--LSRLRNAEVNEAKEMFL---QMQSSGITPNLI-- 501

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
                                    +W  M+ G  QNG  EEA    R+M E  + PN  
Sbjct: 502 -------------------------SWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAF 536

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +I   L A   + +   G+ +HG+ IR L    +  + TSL+DMY+K G IN A  VF  
Sbjct: 537 SITVALSASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFES 596

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
                   Y  MI  Y   G    A++L+RS++  G +PD+ITF ++LSAC++AG +D+ 
Sbjct: 597 KLSNELPLYNAMISAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQA 656

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +++F  M   + ++P  EHY  + D+     +  +A   ++E+  + +   I  SL+ SC
Sbjct: 657 IRVFTDMVSNHGVKPCLEHYGLLVDLFASAKETDKALRLMEEMPYKPDXRMI-QSLVASC 715

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
                +EL + ++++LLE +   S  G +V +SN YA EG+W+ V K R+ M+ +GL+K+
Sbjct: 716 NKQHKTELVDYLSRQLLETEPEXS--GNYVTISNAYAVEGSWDEVVKTREMMKAKGLKKK 773

Query: 754 VGCSWIDVGGY---VNRFASKDQEHPQSHKIYEMLERLAMEM 792
            GCSWI + G    V+ F + D+ H ++ +I  +L  L  +M
Sbjct: 774 PGCSWIQIKGEEEGVHVFVANDKTHVRNDEIQRILALLLTDM 815



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 270/566 (47%), Gaps = 60/566 (10%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +   ++  ++K G  Y  + ++ +  +  YA+    + A  +F     RN   W  +
Sbjct: 74  DLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAI 133

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
           IG   +      A+  FV++LE +EI  D+    +   A   LQ    G+ +H Y++K  
Sbjct: 134 IGVKCRMGLCEGALMGFVEMLE-NEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAG 192

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FVA  +               V + + ER+VV+WN ++  +VQNG+++E + L+ 
Sbjct: 193 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLS 252

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           +M+K G     VTV+  LSA++N+   + G Q HA  + +G+  +  + + L++ Y K G
Sbjct: 253 DMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVG 312

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
           LI+ A  IF++    ++D  TWN +I+GY Q GL+E+A    + M    +  + VT+A++
Sbjct: 313 LIEYAEMIFDR--MFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 370

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + A     N++LGK++     R+ L+ ++ + ++ +DMY+K G I  A  VF    EK+ 
Sbjct: 371 MSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDL 430

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           + + T++  Y + G S  AL LF  M+   + P+ IT+  ++ +      V+E  ++F L
Sbjct: 431 ILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMF-L 489

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG---NVLEIWGSLLGSCRL- 695
             Q   I P+   +  + + + + G   EA  F++++ E G   N   I  +L  S  L 
Sbjct: 490 QMQSSGITPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLA 549

Query: 696 --------HG-------HSELAEV---------------VAKKLLEMDTRNSMPGYHVLL 725
                   HG       HS  A +                A+++ E    N +P Y+ ++
Sbjct: 550 SXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMI 609

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLR 751
           S  YA  GN      + + + + G +
Sbjct: 610 S-AYALXGNVTEAVALYRSLEDMGXK 634



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 186/382 (48%), Gaps = 34/382 (8%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  G+Q+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 73  RDLCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAA 132

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  LM   EM +     D+  V  +  A   L+    G+  H Y+L+ G
Sbjct: 133 IIGVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAG 192

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +     + S L DMY K G++  AR++F+  +  +R+   WNA++ GY QNG+ EEA   
Sbjct: 193 LEDCVFVASSLADMYGKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRL 250

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M +  V P  VT+++ L A   M  +E G Q H  +I   L+ +  +GTSL++ Y K
Sbjct: 251 LSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCK 310

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F ++ EK+ VT+  +I GY Q G+ E A+ + + M+   ++ D +T   +
Sbjct: 311 VGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 370

Query: 621 LSACSYAGLVDEGLQIFDLMQQ---EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +SA +      E L++   +Q     + ++          DM  + G +V+A +      
Sbjct: 371 MSAAART----ENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTV 426

Query: 678 EEGNVLEIWGSLLGSCRLHGHS 699
           E+  +L  W +LL +    GHS
Sbjct: 427 EKDLIL--WNTLLAAYAESGHS 446



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV EM  +   I       +L      R+   GKQ HA +L++G 
Sbjct: 31  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 90

Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            +   E +E+ L+  YAK   ++ A  +F K     R+  +W A+I    + GL E A +
Sbjct: 91  LYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRV--RNVFSWAAIIGVKCRMGLCEGALM 148

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+ ++  L+  VFV +SL DMY 
Sbjct: 149 GFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYG 208

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  G+EP  +T   
Sbjct: 209 KCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVST 268

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +    V+EG Q
Sbjct: 269 CLSASANMAGVEEGTQ 284



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 196/451 (43%), Gaps = 79/451 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+      
Sbjct: 303 SLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKY 362

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T ++++ A A T NL++GK V C   R        + ++ ++MY+ C S +DA+ 
Sbjct: 363 DC--VTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAK- 419

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+   ++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 420 -----------------KVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVP 462

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++ N+                  +L +L +  VN+    +  +F+           
Sbjct: 463 PNVITW-NLI-----------------ILSRLRNAEVNE----AKEMFL----------- 489

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++  + +  N   W TM+ G VQN    EAI  F++ ++   +  +  +   ALSA + L
Sbjct: 490 QMQSSGITPNLISWTTMMNGMVQNGCSEEAIH-FLRKMQESGMRPNAFSITVALSASANL 548

Query: 344 QELDLGQQLHAYIIKNF---------------------VALPVIVLNAVIERDVVSWNTM 382
                G+ +H YII+N                      +     V  + +  ++  +N M
Sbjct: 549 ASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAM 608

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHG 441
           ISA+   G   E + L   ++  G   DS+T T+LLSA ++  + D   +    ++  HG
Sbjct: 609 ISAYALXGNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHG 668

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           +    +E Y  L+D++A +     A ++ E+
Sbjct: 669 VK-PCLEHYGLLVDLFASAKETDKALRLMEE 698



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 22/229 (9%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           Q+ S+ P +       I SRL          +  Q+  S   P  + W T++ G V N  
Sbjct: 457 QLESVPPNVITWNL-IILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNGMVQNGC 515

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF-V 144
             EAI    +M++S    +   ++ +  L A A   +   G+++H + IR   + S   +
Sbjct: 516 SEEAIHFLRKMQESGMRPNA--FSITVALSASANLASXHFGRSIHGYIIRNLRHSSSASI 573

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
             SL++MY+ C     AE                  +VF++     +  +N ++S Y   
Sbjct: 574 ETSLVDMYAKCGDINKAE------------------RVFESKLSNELPLYNAMISAYALX 615

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
               EAV  +R +  MG +P +I+F ++  A +  GD   A  V+  +V
Sbjct: 616 GNVTEAVALYRSLEDMGXKPDSITFTSLLSACNHAGDIDQAIRVFTDMV 664


>gi|225459429|ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 201/622 (32%), Positives = 328/622 (52%), Gaps = 37/622 (5%)

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           V +WN I+S  V+     +A+  F  ML     P+ I+  ++ PA + L   +    ++ 
Sbjct: 10  VNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHA 69

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           + +K G   V +++V  S I MY++ G +D+A K+F     +NT +WN MI  YV     
Sbjct: 70  IALKHG--IVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNEGKV 127

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            +A+ L ++ ++ D    D +T+ + LS          G   +    + F  L  +V   
Sbjct: 128 EDALGL-LRSMQKDGWKPDVITYNTILS----------GHARNGLKTQAFELLSEMV-QM 175

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG------------FMIDSVTVTALL 418
            ++ +VVS+N +IS F Q+GL  E L +   MQ                  + +T+T  L
Sbjct: 176 GLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGAL 235

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            A ++L     GK+ H Y LR+G  FE    + S L+DMYAK   + +A ++F + D   
Sbjct: 236 PACADLNLWCQGKEIHGYTLRNG--FEPNIFVSSALVDMYAKCHDMDSANKVFFRIDG-- 291

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           R+  +WNA++AGY  N   EEA   F +ML   + P+ +T   + PAC  +  I  G+ L
Sbjct: 292 RNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGL 351

Query: 536 HGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           HG++ +  LD+    + ++LIDMY+K G I  A +VF    EK+   +  MI  +  HGM
Sbjct: 352 HGYAAKCQLDELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGM 411

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
           +  A ++F  M+  GI PD ITFV++LSAC+  GLV+EG + F+ M+  Y +  + EHY 
Sbjct: 412 ARNAFAVFVQMELLGILPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYT 471

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
           C+  +LG  G + EA +F++++    +   +W +LL +CR+H + E+ E  AK L E++ 
Sbjct: 472 CMVGILGGAGLLDEALDFIRQMPYPPDAC-MWATLLQACRVHSNPEIGERAAKALFELEP 530

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE 774
            N+    ++LLSNIY   G W+    +R  MR R L     CS++ VG ++  F   +  
Sbjct: 531 DNATN--YMLLSNIYVSSGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHICTFKGGESS 588

Query: 775 HPQSHKIYEMLERLAMEMRNAG 796
           HP+  +I E  ++LA +M  +G
Sbjct: 589 HPELEEILEAWDKLARKMELSG 610



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 228/476 (47%), Gaps = 76/476 (15%)

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L+     WN +I G VQN +  +A+++F ++L   E   + +T  S L A + L+ L LG
Sbjct: 6   LQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDP-NIITIASILPACTGLKALRLG 64

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
           + +HA  +K+ +   V V  +VI+                    ++   WN MI+A+V  
Sbjct: 65  KAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVNE 124

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           G  ++ L L+  MQK G+  D +T   +LS  +  RN   G +T A+ L          S
Sbjct: 125 GKVEDALGLLRSMQKDGWKPDVITYNTILSGHA--RN---GLKTQAFELL---------S 170

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM----- 504
            ++ M  K  ++                  ++N +I+G+ Q+GL  EA   FR M     
Sbjct: 171 EMVQMGLKPNVV------------------SFNVLISGFQQSGLSYEALKVFRIMQSPSD 212

Query: 505 -------LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
                  L  ++ PN +TI   LPAC  +     GK++HG+++R   + N+FV ++L+DM
Sbjct: 213 GCNPNEVLNLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDM 272

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K   ++ A  VF +I  +N+V++  ++ GY  +   E AL LF  M G G++P +ITF
Sbjct: 273 YAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPSSITF 332

Query: 618 VAVLSACSYAGLV--DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE-FVK 674
           + +  AC     +    GL  +    Q  +++ +      + DM  + G +++A   F  
Sbjct: 333 MILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIAS--ALIDMYAKCGSILDAKSVFDS 390

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           E+ ++   + +W +++ +  +HG +  A  V    ++M+    +P +   +S + A
Sbjct: 391 EVEKD---VPLWNAMISAFSVHGMARNAFAV---FVQMELLGILPDHITFVSLLSA 440



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 251/590 (42%), Gaps = 127/590 (21%)

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY-TYSSVLKACAETRNLRI 125
           +PT   WN II G V N    +A+ ++S+M     Y    N  T +S+L AC   + LR+
Sbjct: 7   QPTVNSWNGIISGCVQNGYLEDALDMFSRMLW---YPEDPNIITIASILPACTGLKALRL 63

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--------------------- 164
           GKA+H   ++     + +V  S+++MYS C S   AE V                     
Sbjct: 64  GKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVN 123

Query: 165 -----------------GLKYVEVDYS--------------KYDLVCKVFDTMRRRNVVA 193
                            G K   + Y+               ++L+ ++     + NVV+
Sbjct: 124 EGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAFELLSEMVQMGLKPNVVS 183

Query: 194 WNTIVSWYVKTERYVEAVRQFRMM------------LRMGIRPSTISFVNVFPALSSLGD 241
           +N ++S + ++    EA++ FR+M            L + +RP+ I+     PA + L  
Sbjct: 184 FNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNL 243

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           +     ++G  ++ G E   ++FV+S+ + MYA+    D A K+F     RNT  WN ++
Sbjct: 244 WCQGKEIHGYTLRNGFE--PNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALM 301

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI----- 356
            GY+ N  P EA++LF+++L  + +    +TF+    A   +  +  G+ LH Y      
Sbjct: 302 AGYIYNKQPEEALKLFLEMLG-EGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQL 360

Query: 357 --IKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
             +KN +A  +I              V ++ +E+DV  WN MISAF  +G+      +  
Sbjct: 361 DELKNAIASALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFV 420

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGL 460
           +M+  G + D +T  +LLSA +                R G+  EG + Y   M    G+
Sbjct: 421 QMELLGILPDHITFVSLLSACA----------------RDGLVEEGWK-YFNSMEISYGV 463

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
             T                 +  M+      GLL+EA    RQM      P+    A++L
Sbjct: 464 AATLEH--------------YTCMVGILGGAGLLDEALDFIRQM---PYPPDACMWATLL 506

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
            AC    N E+G++    ++  L   N      L ++Y  SG+ ++A N+
Sbjct: 507 QACRVHSNPEIGERA-AKALFELEPDNATNYMLLSNIYVSSGMWDFAKNL 555



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++F  I    TV WN ++ G++ N  P EA+ L+ +M       S  + T+  +  AC
Sbjct: 282 ANKVFFRIDGRNTVSWNALMAGYIYNKQPEEALKLFLEMLGEGLQPS--SITFMILFPAC 339

Query: 118 AETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            +   +R G+ +H +  +C        + ++L++MY+ C S LDA+              
Sbjct: 340 GDIAAIRFGRGLHGYAAKCQLDELKNAIASALIDMYAKCGSILDAK-------------- 385

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                VFD+   ++V  WN ++S +        A   F  M  +GI P  I+FV++  A 
Sbjct: 386 ----SVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFVQMELLGILPDHITFVSLLSAC 441

Query: 237 SSLG-------DYKSADVVYGLLVKL 255
           +  G        + S ++ YG+   L
Sbjct: 442 ARDGLVEEGWKYFNSMEISYGVAATL 467


>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
 gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
          Length = 681

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 217/722 (30%), Positives = 335/722 (46%), Gaps = 150/722 (20%)

Query: 126 GKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFD 184
           GK +H  F +      +  + N LL MY+ C S  DA                   K+FD
Sbjct: 24  GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAH------------------KLFD 65

Query: 185 TMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS 244
            M  RN  +WNT++  Y+K+     ++R F MM                   S+  DY S
Sbjct: 66  EMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMM-------------------SNKNDY-S 105

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
            +VV+    K G                       + AR++F+    RN  VWN+MI  Y
Sbjct: 106 WNVVFSGFAKAGE---------------------MEIARRLFNEMPNRNGVVWNSMIHSY 144

Query: 305 VQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
            +N  P EA+ LF  + +  LD+   D     + + A + L E+  G+Q+HA I+ + + 
Sbjct: 145 ARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARILIDNME 204

Query: 363 LPVI--------------------VLNAVIERD--------------------------- 375
           L  +                    VLN + E D                           
Sbjct: 205 LDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRK 264

Query: 376 ----VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
               VV WN++IS +V N  + E  +L  +MQK+G  +D  T+  +LSA S+L N   GK
Sbjct: 265 SNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGK 324

Query: 432 QTHAYLLRHGI-------------------------HFEGMESY-------LIDMYAKSG 459
           Q HAY  + G+                          F  +++Y       +I +Y+ SG
Sbjct: 325 QMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSG 384

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            I+ A+QIF  N    +   +WN+MI G +QNG   EA   F  M + ++  N   + SV
Sbjct: 385 KIEDAKQIF--NTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSV 442

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           + AC  + ++ELG+Q+   +    LD +  + TSL+D Y K G I     +F  + + + 
Sbjct: 443 ISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDE 502

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           +++ +M++GY  +G    AL+LF  M+  G+ P  ITF  VLSAC + GLV EG + F++
Sbjct: 503 ISWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNI 562

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           MQ +Y I P  EHY C+ D+  R G + EA   +K +  E +   +W S+L  C  HG  
Sbjct: 563 MQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADA-SMWSSVLRGCMAHGEK 621

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +L E VA++++E+D  NS  G +V LS+I+A  G+WE+   VRK M+ER ++K  G SW 
Sbjct: 622 DLGEKVAQQIIELDPENS--GAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSWA 679

Query: 760 DV 761
           + 
Sbjct: 680 NC 681



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 230/514 (44%), Gaps = 71/514 (13%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS-PYTS 104
            S   + G   +AR+LF+ +     V+WN++I  +  N  P EA+ L+ ++       + 
Sbjct: 110 FSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSC 169

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           CD +  ++V+ AC +   ++ GK +H   +         + +SL+N+Y  C   LD+   
Sbjct: 170 CDTFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKC-GDLDSAHC 228

Query: 165 GLKYVEV--DYSKYDLVC------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            L  +E   D+S   L+             + F       VV WN+++S YV     +EA
Sbjct: 229 VLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEA 288

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG--------SEYVN- 261
              F  M + G++    +   +  A SSL + +    ++    K+G        S +++ 
Sbjct: 289 FLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDA 348

Query: 262 --------------------DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
                               D  + +S I +Y+  G  + A++IF+    ++   WN+MI
Sbjct: 349 YSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMI 408

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA------- 354
            G  QN  PVEA++LF  + +LD +  +     S +SA + +  L+LG+Q+ A       
Sbjct: 409 VGLSQNGCPVEALDLFCMMNKLD-LRMNRFNLTSVISACASISSLELGEQIFARATVVGL 467

Query: 355 -------------YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                        Y    F+ +   + + +++ D +SWN+M+  +  NG   E L L  E
Sbjct: 468 DSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNE 527

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--LIDMYAKS 458
           M+  G     +T T +LSA  +      G +    ++++  H + G+E Y  ++D++A++
Sbjct: 528 MRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFN-IMQYDYHIDPGIEHYSCMVDLFARA 586

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           G ++ A  +  K    + D + W++++ G   +G
Sbjct: 587 GCLEEAMNLI-KRMPFEADASMWSSVLRGCMAHG 619



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 262/595 (44%), Gaps = 94/595 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +       WNT+I G++ +     +I L+  M         ++Y+++ V    
Sbjct: 60  AHKLFDEMPHRNCFSWNTMIEGYMKSGNKERSIRLFDMMSNK------NDYSWNVVFSGF 113

Query: 118 AETRNLRIGKAVHCHFIRCFSN-PSR--FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           A+   + I +       R F+  P+R   V+NS+++ Y+   S  +A  +   + E++  
Sbjct: 114 AKAGEMEIAR-------RLFNEMPNRNGVVWNSMIHSYARNGSPREAVRL---FKELNLD 163

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS--TISFVNV 232
             D  C   DT     V+   T +   ++  + + A    R+++      S  T S +N+
Sbjct: 164 PLDKSC--CDTFVLATVIGACTDLG-EIQCGKQIHA----RILIDNMELDSVLTSSLINL 216

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           +      GD  SA  V      L +    D F  S+ I  YA  G  + AR+ F      
Sbjct: 217 Y---GKCGDLDSAHCV------LNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNS 267

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
              VWN++I GYV NN  +EA  LF   ++   +  D  T  + LSA S L     G+Q+
Sbjct: 268 CVVVWNSLISGYVTNNEEIEAFLLF-NDMQKKGLKVDFSTLATILSACSSLCNSQHGKQM 326

Query: 353 HAY------IIKNFVA-------------------------LPVIVLNAVI--------- 372
           HAY      I  N VA                            I+LN++I         
Sbjct: 327 HAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKI 386

Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       + ++SWN+MI    QNG   E L L   M K    ++   +T+++SA 
Sbjct: 387 EDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISAC 446

Query: 422 SNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           +++ + ++G+Q  A     G+   E + + L+D Y K G I+  R++F+       D+ +
Sbjct: 447 ASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDT--MMKSDEIS 504

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFS 539
           WN+M+ GY  NG   EA   F +M    V P  +T   VL AC+  G ++ G +  +   
Sbjct: 505 WNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQ 564

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG 593
             Y +D  +   + ++D+++++G +  A N+  ++P E ++  +++++ G   HG
Sbjct: 565 YDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHG 619



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/450 (22%), Positives = 208/450 (46%), Gaps = 33/450 (7%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L   H +   + +    ++ + ++     GR + AR+ F   +    V+WN++I G+V N
Sbjct: 223 LDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTN 282

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           N   EA LL++ M+K       D  T +++L AC+   N + GK +H +  +        
Sbjct: 283 NEEIEAFLLFNDMQKKG--LKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNV 340

Query: 144 VYNSLLNMYSTCLSSLDA----------EMVGLKYVEVDYS---KYDLVCKVFDTMRRRN 190
           V ++ ++ YS C S  DA          + + L  +   YS   K +   ++F+TM  ++
Sbjct: 341 VASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKS 400

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           +++WN+++    +    VEA+  F MM ++ +R +  +  +V  A +S+   +  + ++ 
Sbjct: 401 LISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFA 460

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
               +G +  +D  +++S +  Y + G  +  RK+FD  ++ +   WN+M+ GY  N H 
Sbjct: 461 RATVVGLD--SDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHG 518

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVIVLN 369
           +EA+ LF ++     +   ++TF   LSA             H  ++K  +    ++  +
Sbjct: 519 LEALTLFNEMRHAG-VRPTEITFTGVLSACD-----------HCGLVKEGWRWFNIMQYD 566

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
             I+  +  ++ M+  F + G  +E + L+  M    F  D+   +++L        +D+
Sbjct: 567 YHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMP---FEADASMWSSVLRGCMAHGEKDL 623

Query: 430 GKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           G++    ++       G    L  ++A SG
Sbjct: 624 GEKVAQQIIELDPENSGAYVQLSSIFATSG 653


>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
 gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g19020, mitochondrial; Flags: Precursor
 gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
          Length = 685

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 208/686 (30%), Positives = 345/686 (50%), Gaps = 107/686 (15%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S L +CA + ++  G+ +HC  ++   + + ++ NS+LNMY+ C    DAE V   + ++
Sbjct: 46  SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D + ++++              K+FD M  R+ V++ T++  Y +  ++ EA+  FR M 
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
            +GI  + ++   V  A S LG      ++  L +KL  E    +FV+++ + MY    C
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLE--GRVFVSTNLLHMYCLCLC 223

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              ARK+FD   ERN   WN M+ GY +     +A ELF Q+ E D              
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD-------------- 269

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
                                                +VSW TMI   ++    DE L+ 
Sbjct: 270 -------------------------------------IVSWGTMIDGCLRKNQLDEALVY 292

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-----------IHFEGM 447
             EM + G     V +  LLSA++       G Q H  +++ G           IHF  +
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAV 352

Query: 448 ---------------------ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
                                 + LI  + K+G+++ AR++F++  + D+D  +WNAMI+
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ--THDKDIFSWNAMIS 410

Query: 487 GYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           GY Q+   + A   FR+M+  + V P+ +T+ SV  A + +G++E GK+ H +     + 
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT---YTTMILGYGQHGMSERALSLF 602
            N  +  ++IDMY+K G I  A N+F +    +S T   +  +I G   HG ++ AL L+
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             ++   I+P++ITFV VLSAC +AGLV+ G   F+ M+ ++ I+P  +HY C+ D+LG+
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            G++ EA E +K++  + +V+ IWG LL + R HG+ E+AE+ A +L  +D   S  G  
Sbjct: 591 AGRLEEAKEMIKKMPVKADVM-IWGMLLSASRTHGNVEIAELAATELAAIDP--SHGGCK 647

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRER 748
           V+LSN+YA+ G WE+V  VR+EMR R
Sbjct: 648 VMLSNVYADAGRWEDVALVREEMRTR 673



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 119/511 (23%), Positives = 227/511 (44%), Gaps = 82/511 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +   + V + T+I G+  NN   EA+ L+ +M+        +  T ++V+ AC
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML--NEVTLATVISAC 183

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE----------MVGLK 167
           +    +   + +    I+       FV  +LL+MY  CL   DA           +V   
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWN 243

Query: 168 YVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            +   YSK  L+ +   +FD +  +++V+W T++   ++  +  EA+  +  MLR G++P
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303

Query: 225 STISFVNVFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA--------- 274
           S +  V++  A + S+G  K   + +G +VK G +  +  F+ ++ I  YA         
Sbjct: 304 SEVMMVDLLSASARSVGSSKGLQL-HGTIVKRGFDCYD--FLQATIIHFYAVSNDIKLAL 360

Query: 275 ----------------------ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
                                 + G  + AR++FD   +++   WN MI GY Q+  P  
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP-------- 364
           A+ LF +++   ++  D +T +S  SA+S L  L+ G++ H Y+  NF  +P        
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAA 478

Query: 365 VIVLNA-----------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +I + A                 +    +  WN +I     +G     L L  ++Q    
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTA 464
             +S+T   +LSA  +    ++GK     +   HGI  + ++ Y  ++D+  K+G ++ A
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD-IKHYGCMVDLLGKAGRLEEA 597

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
           +++ +K      D   W  +++    +G +E
Sbjct: 598 KEMIKKMPV-KADVMIWGMLLSASRTHGNVE 627



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 121/251 (48%), Gaps = 35/251 (13%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           V+AL S AS+  +   G+Q H  +L+ G+   G + + +++MYAK  L+  A  +F  + 
Sbjct: 45  VSALGSCASS-NDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103

Query: 473 SGD------------RDQATWNAM-----------------IAGYTQNGLLEEAFVAFRQ 503
             D            R +  W+A+                 I GY QN    EA   FR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M    +  N VT+A+V+ AC+ +G I   + L   +I+  L+  VFV T+L+ MY     
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           +  A  +F ++PE+N VT+  M+ GY + G+ E+A  LF  +     E D +++  ++  
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDG 279

Query: 624 CSYAGLVDEGL 634
           C     +DE L
Sbjct: 280 CLRKNQLDEAL 290



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 30/348 (8%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L     L   +P+    T    L+   + G    A +LFD IT    V W T+I G +  
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           N   EA++ Y++M +     S        +L A A +     G  +H   ++   +   F
Sbjct: 284 NQLDEALVYYTEMLRCGMKPS--EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341

Query: 144 VYNSLLNMYSTC-----------------LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           +  ++++ Y+                   ++S +A + G     V     +   +VFD  
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF----VKNGMVEQAREVFDQT 397

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSA 245
             +++ +WN ++S Y ++     A+  FR M+    ++P  I+ V+VF A+SSLG  +  
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF---DNCLERNTEVWNTMIG 302
              +  L    +   ND   A + I MYA+ G  + A  IF    N        WN +I 
Sbjct: 458 KRAHDYL-NFSTIPPNDNLTA-AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           G   + H   A++L+  +  L  I  + +TF+  LSA      ++LG+
Sbjct: 516 GSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLSACCHAGLVELGK 562



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 31/145 (21%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF--- 571
            + S L +C    ++  G+Q+H   ++  LD N ++  S+++MY+K  ++  A +VF   
Sbjct: 43  ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102

Query: 572 AKI----------------------------PEKNSVTYTTMILGYGQHGMSERALSLFR 603
           AK+                            PE++ V+YTT+I GY Q+     A+ LFR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162

Query: 604 SMKGCGIEPDAITFVAVLSACSYAG 628
            M+  GI  + +T   V+SACS+ G
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLG 187


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 311/550 (56%), Gaps = 31/550 (5%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D+ V++  + +YA+      AR++FD   ERN   W+ MI GY Q   P+ A+ LF ++
Sbjct: 36  SDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKL 95

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVIVL------ 368
                IV ++  + S +SA + L+ L  G+Q+H   +K      +FV+  +I +      
Sbjct: 96  ----NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGK 151

Query: 369 --------NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                   N  +E + V++N +I+ FV+N   D+G  ++  M + GF  D  T   LL  
Sbjct: 152 CSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGT 211

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            ++  +   G+  H   ++  ++    + + +I MY+K  L++ A + F   +  ++D  
Sbjct: 212 CNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIE--EKDLI 269

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
           +WN  I+  +     E+A  AF++ML E  V P+  T AS L AC+ + ++  GKQ+HG 
Sbjct: 270 SWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGH 329

Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
            IR  L Q+V  G +LI+MY+K G I  A  +F+K+  +N V++ TMI G+G HG   +A
Sbjct: 330 LIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKA 389

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
             LF  MK  G++PD++TFV +L+A ++AGLVDEGL  F+ M++ Y I P  EH+ C+ D
Sbjct: 390 FELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLID 449

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           +LGR G++ EA E++K+    G+   + GSLL +CRLHG  +  +  A++LL++    + 
Sbjct: 450 LLGRAGRLNEAKEYMKKF-PFGHDTVVLGSLLSACRLHGDVDTGKCFARQLLKLQPATTS 508

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
           P  +VLLSN+YA +  W+ V +  K ++  GL+KE G S I+V G   +F   D  H + 
Sbjct: 509 P--YVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLIEVNGTFEKFTVVDFSHSRI 566

Query: 779 HKIYEMLERL 788
            +I +ML+ L
Sbjct: 567 EEIMDMLKIL 576



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 253/562 (45%), Gaps = 86/562 (15%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S++  C++T+ LR G  +H   I+  +     V N +LN+Y+ C    +A          
Sbjct: 8   SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREAR--------- 58

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
                    +VFD M  RN+V+W+ ++S Y   E+  E +    +  ++ I P+   + +
Sbjct: 59  ---------QVFDEMSERNLVSWSAMISGY---EQIGEPISALGLFSKLNIVPNEYVYAS 106

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           V  A +SL        ++G  +K G + V+  FV+++ I MY + G    A   ++  LE
Sbjct: 107 VISACASLKGLVQGKQIHGQALKFGLDSVS--FVSNALITMYMKCGKCSDALLAYNEALE 164

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            N   +N +I G+V+N  P +  E+ ++++  D    D  TF+  L   +   +L  G+ 
Sbjct: 165 LNPVAYNALITGFVENQQPDKGFEV-LRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGEL 223

Query: 352 LHAYIIK------NFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNGL 391
           LH   IK       F+   +I +               ++ E+D++SWNT IS+      
Sbjct: 224 LHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCND 283

Query: 392 DDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
            ++ L    EM  +  +  D  T  + L+A S L +   GKQ H +L+R  ++ + G  +
Sbjct: 284 HEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGN 343

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI+MYAK G I  A  IF K +   ++  +WN MIAG+  +G   +AF  F +M    V
Sbjct: 344 ALINMYAKCGCIAKAYYIFSKME--HQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGV 401

Query: 510 TPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
            P+ VT   +L A N  G ++ G    +     Y +   +   + LID+  ++G +N A 
Sbjct: 402 KPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAK 461

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
               K P      + T++LG                              ++LSAC   G
Sbjct: 462 EYMKKFP----FGHDTVVLG------------------------------SLLSACRLHG 487

Query: 629 LVDEGLQIFDLMQQEYKIQPST 650
            VD G + F   +Q  K+QP+T
Sbjct: 488 DVDTG-KCF--ARQLLKLQPAT 506



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 237/520 (45%), Gaps = 73/520 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+FD ++    V W+ +I G+     P  A+ L+S++         + Y Y+SV+ AC
Sbjct: 57  ARQVFDEMSERNLVSWSAMISGYEQIGEPISALGLFSKLNIVP-----NEYVYASVISAC 111

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A  + L  GK +H   ++   +   FV N+L+ MY  C    DA +   + +E+      
Sbjct: 112 ASLKGLVQGKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALEL------ 165

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
                       N VA+N +++ +V+ ++  +     RMM + G  P   +FV +    +
Sbjct: 166 ------------NPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCN 213

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S  D K  ++++   +KL  +  +  F+ +  I MY++L   + A K F +  E++   W
Sbjct: 214 SRDDLKRGELLHCQTIKL--KLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISW 271

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT I      N   +A+E F ++L    +  D+ TF SAL+A S L  +  G+Q+H ++I
Sbjct: 272 NTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLI 331

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +  +   V   NA+I                     +++VSWNTMI+ F  +G   +   
Sbjct: 332 RTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFE 391

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGME-------- 448
           L  +M+  G   DSVT   LL+A++           HA L+  G ++F  ME        
Sbjct: 392 LFAKMKTMGVKPDSVTFVGLLTASN-----------HAGLVDEGLVYFNSMEETYGISPE 440

Query: 449 ----SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               S LID+  ++G +  A++  +K   G  D     ++++    +G ++      RQ+
Sbjct: 441 IEHFSCLIDLLGRAGRLNEAKEYMKKFPFG-HDTVVLGSLLSACRLHGDVDTGKCFARQL 499

Query: 505 LE-HNVTPNVVTIASVLPACNPM--GNIELGKQLHGFSIR 541
           L+    T +   + S L A + M  G  E  K L G  ++
Sbjct: 500 LKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLK 539



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + S++  C+    +  G  LH  +I+     +V V   ++++Y+K   +  A  VF ++ 
Sbjct: 6   VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC-SYAGLVDEGL 634
           E+N V+++ MI GY Q G    AL LF  +    I P+   + +V+SAC S  GLV +G 
Sbjct: 66  ERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLV-QGK 121

Query: 635 QI 636
           QI
Sbjct: 122 QI 123


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 201/621 (32%), Positives = 326/621 (52%), Gaps = 68/621 (10%)

Query: 236 LSSLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           LSS  D KS      ++G ++ LG E  + + V     F Y+       A  I +N    
Sbjct: 181 LSSCTDVKSLAEGRQLHGHIISLGFEQ-HPILVPKLVTF-YSAFNLLVDAHVITENSNIL 238

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I  YV+N    +A+  + Q+++   I  D+ T+ S L A  +  +L  G+++
Sbjct: 239 HPFPWNLLISSYVRNGFCQKALSAYKQMVK-KGIRPDNFTYPSVLKACGEELDLGFGKEV 297

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H  I  + +   +IV NA+I                    ERD VSWN+MIS +   G+ 
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357

Query: 393 DEG-----------------------------------LMLVYEMQKQGFMIDSVTVTAL 417
           +E                                    L L+ +M+K G  +DSV +   
Sbjct: 358 NEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIG 417

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           L A S++ +  +GK+ H++ +R      + +++ LI MY++   +K A  +F+  ++  +
Sbjct: 418 LGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEA--K 475

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
              +WN++I+G       EEA    R+ML   + PN VTIASVLP C  + N++ GK+ H
Sbjct: 476 SLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFH 535

Query: 537 GFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
            +  R      ++ +  +L+DMY++SG +  A  VF  + E++ +TYT+MI GYG  G  
Sbjct: 536 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 595

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
           + AL LF  M    I+PD IT +AVLSACS++GLV +G  +F+ M+  Y + P  EH+ C
Sbjct: 596 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 655

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           + D+ GR G + +A E ++ +  +     +W +L+G+CR+H ++E+ E  A+KLLEM   
Sbjct: 656 MTDLFGRAGLLNKAKEIIRNMPYKPTP-AMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 714

Query: 716 NSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEH 775
           N  PGY+VL++N+YA  G W  + KVR  MR+ G+RK  GC+W+DVG   + F   D  +
Sbjct: 715 N--PGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSN 772

Query: 776 PQSHKIYEMLERLAMEMRNAG 796
             + +IY +LE L M ++ AG
Sbjct: 773 ANADEIYPLLEGLTMVIKEAG 793



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 129/544 (23%), Positives = 234/544 (43%), Gaps = 97/544 (17%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS+L +C + ++L  G+ +H H I         +   L+  YS                 
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSA---------------- 221

Query: 171 VDYSKYDLVCKVFDTMRRRNVV---AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                ++L+          N++    WN ++S YV+     +A+  ++ M++ GIRP   
Sbjct: 222 -----FNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNF 276

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN------DLFVASSAIFMYAELGCFDF 281
           ++ +V  A       +  D+ +G  V    E +N       L V ++ I MY + G    
Sbjct: 277 TYPSVLKACG-----EELDLGFGKEVH---ESINASRIKWSLIVHNALISMYGKCGKVGI 328

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF----VQVLELDEIVF--------- 328
           AR +FD   ER+   WN+MI  Y       EA ELF     + +EL+ I++         
Sbjct: 329 ARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLR 388

Query: 329 ---------------------DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
                                D V  +  L A S + +  LG+++H++ I++       V
Sbjct: 389 TGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTV 448

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            N++I                     + ++SWN++IS        +E   L+ EM   G 
Sbjct: 449 KNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGI 508

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTAR 465
             + VT+ ++L   + + N   GK+ H Y+ R     + +  +  L+DMYA+SG +  AR
Sbjct: 509 EPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEAR 568

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F+    G+RD+ T+ +MIAGY   G  + A   F +M    + P+ +T+ +VL AC+ 
Sbjct: 569 RVFDM--LGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSH 626

Query: 526 MGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            G +  G+ L       Y L  ++     + D++ ++G++N A  +   +P K +     
Sbjct: 627 SGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWA 686

Query: 585 MILG 588
            ++G
Sbjct: 687 TLIG 690



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 194/466 (41%), Gaps = 68/466 (14%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN +I  +V N    +A+  Y QM K       DN+TY SVLKAC E  +L  GK VH  
Sbjct: 243 WNLLISSYVRNGFCQKALSAYKQMVKKG--IRPDNFTYPSVLKACGEELDLGFGKEVHES 300

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR----- 187
                   S  V+N+L++MY  C     A  +  K  E D   ++ +  V+ +M      
Sbjct: 301 INASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEA 360

Query: 188 ------------RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                         N++ WNTI   Y++T  Y  A+     M + G    +++ +    A
Sbjct: 361 FELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGA 420

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S +GD K    ++   ++     V+   V +S I MY+       A  +F     ++  
Sbjct: 421 CSHIGDAKLGKEIHSFAIRSCFGEVDT--VKNSLITMYSRCKDLKHAYLLFQLMEAKSLI 478

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN++I G    +   EA  L  ++L L  I  + VT  S L   +++  L  G++ H Y
Sbjct: 479 SWNSIISGCCHMDRSEEASFLLREML-LSGIEPNYVTIASVLPLCARVANLQHGKEFHCY 537

Query: 356 IIK--NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDD 393
           + +  +F    +++ NA++                    ERD +++ +MI+ +   G   
Sbjct: 538 MTRREDFKD-HLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQ 596

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--- 450
             L L  EM       D +T+ A+LSA S+      G  T   LL     FE M S    
Sbjct: 597 AALKLFEEMNNFQIKPDHITMIAVLSACSH-----SGLVTQGQLL-----FEKMRSLYGL 646

Query: 451 ---------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
                    + D++ ++GL+  A++I  +N       A W  +I  
Sbjct: 647 TPHLEHFACMTDLFGRAGLLNKAKEII-RNMPYKPTPAMWATLIGA 691



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 184/431 (42%), Gaps = 41/431 (9%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEA 89
           IP+    +  S +S     G  + A +LF S+         +IWNTI  G++       A
Sbjct: 336 IPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGA 395

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSL 148
           + L SQM+K   +   D+      L AC+   + ++GK +H   IR CF      V NSL
Sbjct: 396 LELLSQMRKXGSHL--DSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDT-VKNSL 452

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           + MYS C          LK+  +          +F  M  +++++WN+I+S     +R  
Sbjct: 453 ITMYSRCKD--------LKHAYL----------LFQLMEAKSLISWNSIISGCCHMDRSE 494

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA    R ML  GI P+ ++  +V P  + + + +     +  + +   ++ + L + ++
Sbjct: 495 EASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRR-EDFKDHLLLWNA 553

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + MYA  G    AR++FD   ER+   + +MI GY        A++LF ++    +I  
Sbjct: 554 LVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNF-QIKP 612

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           D +T ++ LSA S    +  GQ L   +   +   P           +  +  M   F +
Sbjct: 613 DHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP----------HLEHFACMTDLFGR 662

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            GL ++   ++  M    +         L+ A    RN ++G+     LL       G  
Sbjct: 663 AGLLNKAKEIIRNMP---YKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYY 719

Query: 449 SYLIDMYAKSG 459
             + +MYA +G
Sbjct: 720 VLIANMYAAAG 730



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 23/301 (7%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK 470
           +++LLS+ +++++   G+Q H +++  G  FE    +   L+  Y+   L+  A  I E 
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLG--FEQHPILVPKLVTFYSAFNLLVDAHVITE- 233

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
            +S       WN +I+ Y +NG  ++A  A++QM++  + P+  T  SVL AC    ++ 
Sbjct: 234 -NSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 292

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GK++H       +  ++ V  +LI MY K G +  A ++F KIPE+++V++ +MI  Y 
Sbjct: 293 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 352

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
             GM   A  LF SM    IE + I +  +       G     L++   M++        
Sbjct: 353 SMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRK------XG 406

Query: 651 EHYCCVADMLG----------RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
            H   VA ++G          ++GK + ++      GE   V     ++   C+   H+ 
Sbjct: 407 SHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAY 466

Query: 701 L 701
           L
Sbjct: 467 L 467


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 224/683 (32%), Positives = 350/683 (51%), Gaps = 80/683 (11%)

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD----YS---- 174
           +R G   H H           V NSLL++Y+   +  D   V L + E+D    YS    
Sbjct: 72  VRTGLGAHSH-----------VANSLLSLYAK--AHRDLASVKLTFQEIDCPDAYSWTTL 118

Query: 175 -----KYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                K D V    KVFD + + ++  WN +++   +      A   FR M +MG++   
Sbjct: 119 LSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADK 178

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  +  +L SL  +     V+ +++K G  ++    V +S I MY + GC   A ++F
Sbjct: 179 YTFATML-SLCSLELFDYGRHVHSVVIKSG--FLGWTSVVNSLITMYFKCGCVVDACEVF 235

Query: 287 DNCLE---RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD--DVTFLSALSAVS 341
           +   E   R+   +N MI G+       +A  +F    ++ +  FD  +VTF+S +S+ S
Sbjct: 236 EEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIF---RDMQKGCFDPTEVTFVSVMSSCS 292

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
            L+    G Q  +  IK      V V NA++                    ERDVVSWN 
Sbjct: 293 SLRA---GCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNI 349

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           M+S F+Q  L++E ++   +M+++G   D  T  +LL+A  +L+   V +  H+ L + G
Sbjct: 350 MVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQ---VVEMIHSLLCKSG 406

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGD--RDQATWNAMIAGYTQNGLLEEAFV 499
           +    + + L+  Y + G IK A QIF    SG   +   +WN++I+G+  NG   +   
Sbjct: 407 LVKIEVLNALVSAYCRHGKIKRAFQIF----SGVPYKSLISWNSIISGFLMNGHPLQGLE 462

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F  +L   V PN  +++ VL  C+ M  +  GKQ+HG+ +R+     V +G +L+ MY+
Sbjct: 463 QFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYA 522

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC-GIEPDAITFV 618
           K G ++ A  VF  + E++++T+  +I  Y QHG  E A+  F +M+   GI+PD  TF 
Sbjct: 523 KCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFT 582

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE--L 676
           +VLSACS+AGLVD+G++IFD M + Y   PS +H+ C+ D+LGR G + EA   +K    
Sbjct: 583 SVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYF 642

Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
           G   N+   W SL  +C  HG+  L   VA+ +LE D  N  P  +VLLSNI A  G WE
Sbjct: 643 GAHSNI--CW-SLFSACAAHGNLGLGRTVARLILERDHNN--PSVYVLLSNICAAAGQWE 697

Query: 737 NVDKVRKEMRERGLRKEVGCSWI 759
               +R+ MRE G  K+ GCSWI
Sbjct: 698 EAANLREMMREFGTIKQPGCSWI 720



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 287/616 (46%), Gaps = 69/616 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD I +    +WN +I G         A  L+  M K       D YT++++L  C
Sbjct: 131 ALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMG--VKADKYTFATMLSLC 188

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +       G+ VH   I+        V NSL+ MY  C   +DA                
Sbjct: 189 S-LELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDA---------------- 231

Query: 178 LVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
             C+VF+       R+ V++N ++  +   ER  +A   FR M +    P+ ++FV+V  
Sbjct: 232 --CEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMS 289

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           + SSL   ++        +K+G  +V  + V ++ + MY+  G     + IF+   ER+ 
Sbjct: 290 SCSSL---RAGCQAQSQAIKMG--FVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDV 344

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN M+  ++Q N   EA+  +++ +  + I  D+ T+ S L+A   LQ +++   +H+
Sbjct: 345 VSWNIMVSMFLQENLEEEAMLSYLK-MRREGIEPDEFTYGSLLAATDSLQVVEM---IHS 400

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
            + K+ + + + VLNA++                     + ++SWN++IS F+ NG   +
Sbjct: 401 LLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQ 459

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
           GL     +       ++ +++ +LS  S++     GKQ H Y+LRHG   E  + + L+ 
Sbjct: 460 GLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVT 519

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTPN 512
           MYAK G +  A ++F+     +RD  TWNA+I+ Y Q+G  EEA   F  M     + P+
Sbjct: 520 MYAKCGSLDKALRVFDAMV--ERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPD 577

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
             T  SVL AC+  G ++ G ++    ++ Y    +V   + ++D+  +SG ++ A  V 
Sbjct: 578 QATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVI 637

Query: 572 AK--IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD---AITFVAVLSACSY 626
                   +++ + ++      HG     L L R++    +E D      +V + + C+ 
Sbjct: 638 KSGYFGAHSNICW-SLFSACAAHG----NLGLGRTVARLILERDHNNPSVYVLLSNICAA 692

Query: 627 AGLVDEGLQIFDLMQQ 642
           AG  +E   + ++M++
Sbjct: 693 AGQWEEAANLREMMRE 708



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 31/246 (12%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNT 75
            AT     +  IHSL      +K   + + +S  C+ G+   A Q+F  +   + + WN+
Sbjct: 387 AATDSLQVVEMIHSLLCKSGLVKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNS 446

Query: 76  IIIGFVCNNLPYEAI-----LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           II GF+ N  P + +     LL +Q+K ++       Y+ S VL  C+    +  GK VH
Sbjct: 447 IISGFLMNGHPLQGLEQFSALLSTQVKPNA-------YSLSLVLSICSSMSAMSHGKQVH 499

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
            + +R   +    + N+L+ MY+ C  SLD  +                 +VFD M  R+
Sbjct: 500 GYILRHGFSSEVSLGNALVTMYAKC-GSLDKAL-----------------RVFDAMVERD 541

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
            + WN I+S Y +  R  EAV  F  M    GI+P   +F +V  A S  G       ++
Sbjct: 542 TITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIF 601

Query: 250 GLLVKL 255
             +VK+
Sbjct: 602 DTMVKV 607


>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
 gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 195/536 (36%), Positives = 299/536 (55%), Gaps = 42/536 (7%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELG-CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           +VK G E   D  V +S + +Y +LG      R++FD    ++   W +M+ GYV     
Sbjct: 87  VVKSGLE--TDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEH 144

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII------KNFVALP 364
           V+A+E+FV+++    +  ++ T  SA+ A S+L E+ LG+  H  +I       +F++  
Sbjct: 145 VKALEVFVEMVSFG-LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISST 203

Query: 365 VI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMI 409
           +               V + + E DV+ W  ++SAF +N L +E L L Y M + +G + 
Sbjct: 204 LAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 263

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIF 468
           D  T   +L+A  NLR    GK+ H  L+ +GI    + ES L+DMY K G ++ ARQ+F
Sbjct: 264 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVF 323

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N    ++  +W+A++ GY QNG  E+A   FR+M E     ++    +VL AC  +  
Sbjct: 324 --NGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAA 377

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + LGK++HG  +R     NV V ++LID+Y KSG I+ A+ V++K+  +N +T+  M+  
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
             Q+G  E A+S F  M   GI+PD I+F+A+L+AC + G+VDEG   F LM + Y I+P
Sbjct: 438 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKP 497

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH-SELAEVVAK 707
            TEHY C+ D+LGR G   EA E + E  E  N   +WG LLG C  +   S +AE +AK
Sbjct: 498 GTEHYSCMIDLLGRAGLFEEA-ENLLERAECRNDASLWGVLLGPCAANADASRVAERIAK 556

Query: 708 KLLEMDTRNSMPGYH---VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           +++E++     P YH   VLLSN+Y   G   +   +RK M  RG+ K VG SWID
Sbjct: 557 RMMELE-----PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/501 (24%), Positives = 236/501 (47%), Gaps = 47/501 (9%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+S+L+ C +  +   G   H H ++      R V NSLL++Y           +G    
Sbjct: 64  YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFK---------LGPGMR 114

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           E          +VFD    ++ ++W +++S YV  + +V+A+  F  M+  G+  +  + 
Sbjct: 115 ETR--------RVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTL 166

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +   A S LG+ +     +G+++  G E+  + F++S+  ++Y        AR++FD  
Sbjct: 167 SSAVKACSELGEVRLGRCFHGVVITHGFEW--NHFISSTLAYLYGVNREPVDARRVFDEM 224

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            E +   W  ++  + +N+   EA+ LF  +     +V D  TF + L+A   L+ L  G
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284

Query: 350 QQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQN 389
           +++H  +I N +   V+                    V N + +++ VSW+ ++  + QN
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-E 448
           G  ++ + +  EM+++    D      +L A + L    +GK+ H   +R G     + E
Sbjct: 345 GEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S LID+Y KSG I +A +++ K     R+  TWNAM++   QNG  EEA   F  M++  
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSI--RNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYA 567
           + P+ ++  ++L AC   G ++ G+       + Y +       + +ID+  ++G+   A
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518

Query: 568 ANVFAKIPEKNSVTYTTMILG 588
            N+  +   +N  +   ++LG
Sbjct: 519 ENLLERAECRNDASLWGVLLG 539



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 213/452 (47%), Gaps = 53/452 (11%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD       + W +++ G+V      +A+ ++ +M   S     + +T SS +KAC+
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEM--VSFGLDANEFTLSSAVKACS 174

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E   +R+G+  H   I      + F+ ++L  +Y      +DA                 
Sbjct: 175 ELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR---------------- 218

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALS 237
             +VFD M   +V+ W  ++S + K + Y EA+  F  M R  G+ P   +F  V  A  
Sbjct: 219 --RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   K    ++G L+  G    +++ V SS + MY + G    AR++F+   ++N+  W
Sbjct: 277 NLRRLKQGKEIHGKLITNG--IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + ++GGY QN    +AIE+F ++ E D   F  V     L A + L  + LG+++H   +
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTV-----LKACAGLAAVRLGKEIHGQYV 389

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +      VIV +A+I+                    R++++WN M+SA  QNG  +E + 
Sbjct: 390 RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVS 449

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDM 454
              +M K+G   D ++  A+L+A  +    D G+     + + +GI   G E Y  +ID+
Sbjct: 450 FFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIK-PGTEHYSCMIDL 508

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             ++GL + A  + E+ +  + D + W  ++ 
Sbjct: 509 LGRAGLFEEAENLLERAECRN-DASLWGVLLG 539



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 26/310 (8%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR++FD +  P  + W  ++  F  N+L  EA+ L+  M +       D  T+ +VL
Sbjct: 214 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP-DGSTFGTVL 272

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            AC   R L+ GK +H   I      +  V +SLL+MY  C S  +A             
Sbjct: 273 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREAR------------ 320

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VF+ M ++N V+W+ ++  Y +   + +A+  FR M    +      F  V  
Sbjct: 321 ------QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLK 370

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L   +    ++G  V+ G     ++ V S+ I +Y + GC D A +++     RN 
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGC--FGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM 428

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN M+    QN    EA+  F  +++   I  D ++F++ L+A      +D G+    
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVK-KGIKPDYISFIAILTACGHTGMVDEGRNYFV 487

Query: 355 YIIKNFVALP 364
            + K++   P
Sbjct: 488 LMAKSYGIKP 497



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 45/278 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           ARQ+F+ +++  +V W+ ++ G+  N    +AI ++ +M++       D Y + +VLKAC
Sbjct: 319 ARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK------DLYCFGTVLKAC 372

Query: 118 AETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMY--STCLSSLDAEMVGLKYVEVDY 173
           A    +R+GK +H  ++R  CF N    V ++L+++Y  S C+                 
Sbjct: 373 AGLAAVRLGKEIHGQYVRRGCFGNV--IVESALIDLYGKSGCI----------------- 413

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
              D   +V+  M  RN++ WN ++S   +  R  EAV  F  M++ GI+P  ISF+ + 
Sbjct: 414 ---DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470

Query: 234 PALSSLGDYKSADVVYGLL-----VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
            A    G        + L+     +K G+E+       S  I +    G F+ A  + + 
Sbjct: 471 TACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY------SCMIDLLGRAGLFEEAENLLER 524

Query: 289 CLERN-TEVWNTMIGGYVQNNHPVEAIELFVQ-VLELD 324
              RN   +W  ++G    N       E   + ++EL+
Sbjct: 525 AECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG-VINYAANVFAKIP 575
           AS+L  CN + +   G Q H   ++  L+ +  VG SL+ +Y K G  +     VF    
Sbjct: 65  ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRF 124

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
            K+++++T+M+ GY       +AL +F  M   G++ +  T  + + ACS  G V  G
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 229/772 (29%), Positives = 390/772 (50%), Gaps = 72/772 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLP-YEAILL----YSQMKKSSPYTSCDNYTYSS 112
           AR++F+ +     V W+T++    CN+   YE  L+    + + +K+SP    + Y  SS
Sbjct: 98  ARKVFEKMPERNLVTWSTMVSA--CNHHGFYEESLVVFLDFWRTRKNSP----NEYILSS 151

Query: 113 VLKACAETRNLRIGKAVHCHF-IRCFSNPSRF-----VYNSLLNMYSTCLSSLDAEMVGL 166
            ++AC+       G      F ++ F   SRF     V   L++ Y             L
Sbjct: 152 FIQACSGLD----GSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFY-------------L 194

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           K   +DY++      VFD +  ++ V W T++S  VK  R   +++ F  ++   + P  
Sbjct: 195 KEGNIDYARL-----VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDG 249

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
                V  A S L   +    ++  +++ G E   D  + +  I  Y + G    A K+F
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGHE--KDASLMNVLIDSYVKCGRVRAAHKLF 307

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D    +N   W T++ GY QN+   EA+ELF  + +   +  D     S L++ + L  L
Sbjct: 308 DGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFG-LKPDMFACSSILTSCASLHAL 366

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAF 386
           + G Q+HAY IK  +     V N++I+                     DVV +N MI  +
Sbjct: 367 EFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGY 426

Query: 387 VQNGLDDE---GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
            + G   E    L + ++M+ +      +T  +LL A+++L +  + KQ H  + + G++
Sbjct: 427 SRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLN 486

Query: 444 FEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +    S LI +Y+    +K +R +F++     +D   WN+M +GY Q    EEA   F 
Sbjct: 487 LDIFAGSALIAVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFSGYVQQSENEEALNLFL 544

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           ++      P+  T   ++ A   + +++LG++ H   ++  L+ N ++  +L+DMY+K G
Sbjct: 545 ELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
               A   F     ++ V + ++I  Y  HG   +AL +   M   GIEP+ ITFV VLS
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLS 664

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS+AGLV++GL+ F+LM + + I+P TEHY C+  +LGR G++ EA E ++++  +   
Sbjct: 665 ACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAA 723

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W SLL  C   G+ ELAE  A+  +  D ++S  G   LLSNIYA +G W +  KVR
Sbjct: 724 I-VWRSLLSGCAKAGNVELAEYAAEMAILSDPKDS--GSFTLLSNIYASKGMWTDAKKVR 780

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           + M+  G+ KE G SWI++   V+ F SKD+ H ++++IYE+L+ L +++R 
Sbjct: 781 ERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRG 832



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 269/573 (46%), Gaps = 50/573 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           +EG    AR +FD++   +TV W T+I G V     Y ++ L+ Q+ + +     D Y  
Sbjct: 195 KEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVP--DGYIL 252

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S+VL AC+    L  GK +H H +R        + N L++ Y  C               
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKC--------------- 297

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
               +     K+FD M  +N+++W T++S Y +   + EA+  F  M + G++P   +  
Sbjct: 298 ---GRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACS 354

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  + +SL   +    V+   +K  +   ND +V +S I MYA+  C   ARK+FD   
Sbjct: 355 SILTSCASLHALEFGTQVHAYTIK--ANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFA 412

Query: 291 ERNTEVWNTMIGGYVQNNHPVE---AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
             +  ++N MI GY +     E   A+ +F   +    I    +TF+S L A + L  L 
Sbjct: 413 ADDVVLFNAMIEGYSRLGTQWELHDALNIF-HDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
           L +Q+H  + K  + L +   +A+I                     +D+V WN+M S +V
Sbjct: 472 LSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYV 531

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           Q   ++E L L  E+Q      D  T   +++AA NL +  +G++ H  LL+ G+     
Sbjct: 532 QQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPY 591

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L+DMYAK G  + A + F+   +  RD   WN++I+ Y  +G   +A     +M+ 
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFD--SAASRDVVCWNSVISSYANHGEGRKALQMLEKMMC 649

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN +T   VL AC+  G +E G +     +R+ ++        ++ +  ++G +N 
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNE 709

Query: 567 AANVFAKIPEK-NSVTYTTMILGYGQHGMSERA 598
           A  +  K+P K  ++ + +++ G  + G  E A
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 212/423 (50%), Gaps = 34/423 (8%)

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
           +VV+G ++  G E   D ++++  + +Y+  G   +ARK+F+   ERN   W+TM+    
Sbjct: 64  NVVHGQIIVSGLEL--DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACN 121

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD--LGQQLHAYIIKN---- 359
            +    E++ +F+      +   ++    S + A S L      +  QL ++++K+    
Sbjct: 122 HHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDR 181

Query: 360 --FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             +V   +I              V +A+ E+  V+W TMIS  V+ G     L L Y++ 
Sbjct: 182 DVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIK 462
           +   + D   ++ +LSA S L   + GKQ HA++LR+G   +  + + LID Y K G ++
Sbjct: 242 EGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVR 301

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A ++F+     +++  +W  +++GY QN L +EA   F  M +  + P++   +S+L +
Sbjct: 302 AAHKLFDGMP--NKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +  +E G Q+H ++I+  L  + +V  SLIDMY+K   +  A  VF      + V +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419

Query: 583 TTMILGYGQHGMS---ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL--QIF 637
             MI GY + G       AL++F  M+   I P  +TFV++L A   A L   GL  QI 
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIH 477

Query: 638 DLM 640
            LM
Sbjct: 478 GLM 480



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +HG  I   L+ + ++   L+++YS++G + YA  VF K+PE+N VT++TM+     HG 
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 595 SERALSLF----RSMKGCGIEPDAITFVAVLSACSYAGLVDEG-LQIFDLMQQEYKIQPS 649
            E +L +F    R+ K     P+     + + ACS  GL   G   +F L     K +  
Sbjct: 126 YEESLVVFLDFWRTRKN---SPNEYILSSFIQACS--GLDGSGRWMVFQLQSFLVKSRFD 180

Query: 650 TEHY--CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
            + Y    + D   + G +  A      L E+  V   W +++  C   G S ++  +  
Sbjct: 181 RDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTV--TWTTMISGCVKMGRSYVSLQLFY 238

Query: 708 KLLEMDTRNSMPGYHVL 724
           +L+E    N +P  ++L
Sbjct: 239 QLME---GNVVPDGYIL 252


>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
          Length = 648

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 178/521 (34%), Positives = 288/521 (55%), Gaps = 55/521 (10%)

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           D +TF   + A ++LQ    G  +  ++ K   +  V V+NA +                
Sbjct: 120 DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRLF 179

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRN 426
                RDVVSWNT+I  +V++GL  E L L + + + G  +  D VTV   +S  + + +
Sbjct: 180 DESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGD 239

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK--------------- 470
            ++GK+ H ++   G+     + + ++DMY K G ++ A  +FE+               
Sbjct: 240 LELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVG 299

Query: 471 --------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
                         ++  +RD   WNA++AGY QN   +EA   F +M +  V PN +T+
Sbjct: 300 HARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITM 359

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC+ +G +E+G  +H +  R+ L  +V +GTSL+DMY+K G I  A  VF +IP 
Sbjct: 360 VNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPV 419

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +N++T+T+MI G   HG ++ A+  F+ M   G++PD ITF+ VLSAC +AGLV+ G Q 
Sbjct: 420 QNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQF 479

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F LM  +Y ++   +HY C+ D+LGR G + EA + V  +  + + + +WG+L  +CR+H
Sbjct: 480 FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAV-VWGALFFACRMH 538

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+  L E  A KL+E+D  +S  G +VLL+N+YAE    +  DKVR  MR  G+ K  GC
Sbjct: 539 GNITLGEKAAMKLVELDPSDS--GIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGC 596

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           S I++ G V+ F  KD+ H  ++ IY+ L  + ++MR+  N
Sbjct: 597 SCIELNGVVHEFIVKDKSHLDTNAIYDCLHEITLQMRHIAN 637



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 216/438 (49%), Gaps = 64/438 (14%)

Query: 214 FRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
           +R +L  G  RP  ++F  +  A + L        V G + KLG  +  D+FV ++A+  
Sbjct: 108 YRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLG--FSADVFVVNAAMHF 165

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF-DDV 331
           ++  G   FAR++FD    R+   WNT+IGGYV++  P EA+ELF ++ E    V  D+V
Sbjct: 166 WSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEV 225

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------- 372
           T + A+S  +Q+ +L+LG++LH ++    V   V ++NAV+                   
Sbjct: 226 TVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERI 285

Query: 373 --------------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                                           ERDV  WN +++ +VQN    E + L +
Sbjct: 286 SNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
           EMQK     + +T+  LLSA S L   ++G   H Y+ RH +H    + + L+DMYAK G
Sbjct: 346 EMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCG 405

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            IK A  +F  N+   ++  TW +MI G   +G  +EA   F++M++  + P+ +T   V
Sbjct: 406 NIKKAICVF--NEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGV 463

Query: 520 LPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP- 575
           L AC   G +E G+Q   FS+   +Y L++ +   + +ID+  ++G ++ A  +   +P 
Sbjct: 464 LSACCHAGLVEAGRQF--FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPM 521

Query: 576 EKNSVTYTTMILGYGQHG 593
           + ++V +  +      HG
Sbjct: 522 DPDAVVWGALFFACRMHG 539



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 196/428 (45%), Gaps = 37/428 (8%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
            AR+LFD       V WNT+I G+V + LP EA+ L+ ++ +       D  T    +  
Sbjct: 174 FARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSG 233

Query: 117 CAETRNLRIGKAVHCHF----IRCFSNPSRFVYNSLLNMYSTCLSSLDAE---------- 162
           CA+  +L +GK +H       +RC    +  + N++++MY  C S   A           
Sbjct: 234 CAQMGDLELGKRLHEFVDNKGVRC----TVRLMNAVMDMYVKCGSLELANSVFERISNRT 289

Query: 163 MVGLKYVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
            V    + V +++  ++     +FD M  R+V  WN +++ YV+ ++  EA+  F  M +
Sbjct: 290 AVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQK 349

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             + P+ I+ VN+  A S LG  +    V+  + +   +    + + +S + MYA+ G  
Sbjct: 350 SKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDR--HKLHLSVALGTSLVDMYAKCGNI 407

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             A  +F+    +N   W +MI G   + H  EAIE F ++++L  +  D++TF+  LSA
Sbjct: 408 KKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLG-LQPDEITFIGVLSA 466

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                 ++ G+Q  + +   +           +ER +  ++ MI    + G  DE   LV
Sbjct: 467 CCHAGLVEAGRQFFSLMHAKY----------HLERKMKHYSCMIDLLGRAGHLDEAEQLV 516

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
             M       D+V   AL  A     N  +G++    L+       G+   L +MYA++ 
Sbjct: 517 NAMPMDP---DAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEAN 573

Query: 460 LIKTARQI 467
           + K A ++
Sbjct: 574 MRKKADKV 581



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 194/462 (41%), Gaps = 81/462 (17%)

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           LP    LL+S   +       D+ T+  ++KACA  +    G AV  H  +   +   FV
Sbjct: 105 LPLYRALLHSGSARP------DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFV 158

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            N+ ++ +S                           ++FD    R+VV+WNT++  YV++
Sbjct: 159 VNAAMHFWSV------------------RGPMAFARRLFDESPVRDVVSWNTLIGGYVRS 200

Query: 205 ERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDY-------------------K 243
               EA+  F  +   G  +RP  ++ +      + +GD                    +
Sbjct: 201 GLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVR 260

Query: 244 SADVVYGLLVKLGS-EYVNDLFVA---------SSAIFMYAELGCFDFARKIFDNCLERN 293
             + V  + VK GS E  N +F           ++ I  +A LG  + AR +FD   ER+
Sbjct: 261 LMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERD 320

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              WN ++ GYVQN    EAI LF + ++  ++  +++T ++ LSA SQL  L++G  +H
Sbjct: 321 VFPWNALMAGYVQNKQGKEAIALFHE-MQKSKVDPNEITMVNLLSACSQLGALEMGMWVH 379

Query: 354 AYIIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDD 393
            YI ++ + L V                     V N +  ++ ++W +MI     +G  D
Sbjct: 380 HYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHAD 439

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY-- 450
           E +     M   G   D +T   +LSA  +    + G+Q  + L+    H E  M+ Y  
Sbjct: 440 EAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFS-LMHAKYHLERKMKHYSC 498

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           +ID+  ++G +  A Q+       D D   W A+      +G
Sbjct: 499 MIDLLGRAGHLDEAEQLVNAMPM-DPDAVVWGALFFACRMHG 539



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 95/231 (41%), Gaps = 51/231 (22%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIII-------------------------------GFV 81
           G   LA  +F+ I+  T V W T+I+                               G+V
Sbjct: 273 GSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYV 332

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
            N    EAI L+ +M+KS      +  T  ++L AC++   L +G  VH +  R   + S
Sbjct: 333 QNKQGKEAIALFHEMQKSK--VDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLS 390

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             +  SL++MY+ C +   A                 +C VF+ +  +N + W +++   
Sbjct: 391 VALGTSLVDMYAKCGNIKKA-----------------IC-VFNEIPVQNALTWTSMICGL 432

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
                  EA+  F+ M+ +G++P  I+F+ V  A    G  ++    + L+
Sbjct: 433 ANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLM 483



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 108/239 (45%), Gaps = 13/239 (5%)

Query: 501 FRQMLEH-NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           +R +L   +  P+ +T   ++ AC  +     G  + G   +     +VFV  + +  +S
Sbjct: 108 YRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWS 167

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM--KGCGIEPDAITF 617
             G + +A  +F + P ++ V++ T+I GY + G+   AL LF  +   G  + PD +T 
Sbjct: 168 VRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTV 227

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
           +  +S C+  G ++ G ++ + +  +  ++ +      V DM  + G +  A    + + 
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFVDNK-GVRCTVRLMNAVMDMYVKCGSLELANSVFERIS 286

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL--EMDTRNSMPGYHVLLSNIYAEEGN 734
               V   W +++      GH+ L  +   ++L  EM  R+  P   ++   +  ++G 
Sbjct: 287 NRTAV--SWTTMIV-----GHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGK 338


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 201/622 (32%), Positives = 336/622 (54%), Gaps = 50/622 (8%)

Query: 212 RQFRMMLRMGIRPSTISFVNVFPALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASS 268
           R+    +R G +  +  +V   P L    D K    A  ++  +VK G+    D F+ + 
Sbjct: 55  REALSFIREGTKVESAFYV---PILQECIDKKLVSDAQKIHAHIVKTGAH--KDAFLMTF 109

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            + +YA+ G  + ARK+FD    RN   W T++ GYV ++ P  A+++F ++LE      
Sbjct: 110 LVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYP- 168

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------- 372
            + T  +ALSA S L   +LG+Q+H Y IK  +     + N++                 
Sbjct: 169 TNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAF 228

Query: 373 ----ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
               +++V+SW T+ISA+  NG    GL    EM  +    +  T+T+ LS    +++ D
Sbjct: 229 RRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLD 288

Query: 429 VGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +G Q H+  ++ G  FE    +++ ++ +Y K G I  A+++F++ ++      TWNAMI
Sbjct: 289 IGTQIHSLTIKLG--FESNLPIKNSIMYLYLKCGWIHEAKKLFDEMET--ISLVTWNAMI 344

Query: 486 AGYTQ-----------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
           AG+ +           +    EA   F ++    + P++ T +SVL  C+ +  +E G+Q
Sbjct: 345 AGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQ 404

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +H  +I+     +V VGT+L++MY+K G I  A+  F ++  +  +++T+MI GY Q+G 
Sbjct: 405 VHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQ 464

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
            ++AL LF  M+  G+ P+ ITFV VLSACS+AG+VDE L  F +M+ EYKI P  +HY 
Sbjct: 465 PQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYA 524

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
           C+ DM  R+G++ EA++F+KE+  E N   IW  L+  CR  G  EL    A++LL +  
Sbjct: 525 CLIDMFVRLGRLDEAFDFIKEMDLEPNEF-IWSILIAGCRSQGKLELGFYAAEQLLNLKP 583

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE 774
           +++   Y++LL N+Y   G W+ V +VRK M+E  L +    SWI +   +  F    + 
Sbjct: 584 KDT-ETYNLLL-NMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARS 641

Query: 775 HPQSHKIYEMLERLAMEMRNAG 796
           H QS ++YE+L  L  + ++ G
Sbjct: 642 HAQSGEMYELLGNLHEKAKSFG 663



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 142/580 (24%), Positives = 262/580 (45%), Gaps = 68/580 (11%)

Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
           T  ++  Y  +L+ C + + +   + +H H ++  ++   F+   L+N+Y+ C +   A 
Sbjct: 65  TKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETAR 124

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                             KVFD + RRNVV+W T+++ YV   +   AV+ FR ML  G 
Sbjct: 125 ------------------KVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGA 166

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P+  +      A S L   +    ++G  +K   E+  D  + +S   +Y++ G  + A
Sbjct: 167 YPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEF--DASIGNSLCSLYSKCGSLECA 224

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            K F    ++N   W T+I  +  N      ++ FV++L  + +  ++ T  SALS    
Sbjct: 225 VKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLS-ECVEPNEFTLTSALSLCCV 283

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTM 382
           +Q LD+G Q+H+  IK      + + N+++                       +V+WN M
Sbjct: 284 MQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAM 343

Query: 383 ISA------FVQNGL-----DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           I+       F ++ L       E L +  ++ + G   D  T +++LS  S+L   + G+
Sbjct: 344 IAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGE 403

Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q HA  ++ G   +  + + L++MY K G I+ A + F   +   R   +W +MI GY Q
Sbjct: 404 QVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFV--EMSIRTLISWTSMITGYAQ 461

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE-----LGKQLHGFSIRYLLD 545
           NG  ++A + F  M    V PN +T   VL AC+  G ++          + + I  ++D
Sbjct: 462 NGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMD 521

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRS 604
                   LIDM+ + G ++ A +   ++  E N   ++ +I G    G  E  L  + +
Sbjct: 522 HYA----CLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLE--LGFYAA 575

Query: 605 MKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            +   ++P D  T+  +L+    AG   E  ++  +M++E
Sbjct: 576 EQLLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEE 615



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 219/493 (44%), Gaps = 59/493 (11%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR++FD + R   V W T++ G+V ++ P  A+ ++ +M ++  Y +  NYT  +
Sbjct: 118 GTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPT--NYTLGT 175

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L A ++  +  +GK +H + I+        + NSL ++YS C S               
Sbjct: 176 ALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGS--------------- 220

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
               +   K F  +R +NV++W T++S +         ++ F  ML   + P+  +  + 
Sbjct: 221 ---LECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSA 277

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
                 +        ++ L +KLG E  ++L + +S +++Y + G    A+K+FD     
Sbjct: 278 LSLCCVMQSLDIGTQIHSLTIKLGFE--SNLPIKNSIMYLYLKCGWIHEAKKLFDEMETI 335

Query: 293 NTEVWNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           +   WN MI G+ +           +    EA+ +F++ L    +  D  TF S LS  S
Sbjct: 336 SLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLK-LNRSGMKPDLFTFSSVLSVCS 394

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNT 381
            L  L+ G+Q+HA  IK      V+V  A++                     R ++SW +
Sbjct: 395 SLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTS 454

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           MI+ + QNG   + L+L  +M+  G   + +T   +LSA S+    D        +    
Sbjct: 455 MITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEY 514

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
                M+ Y  LIDM+ + G +  A    ++ D  + ++  W+ +IAG    G LE  F 
Sbjct: 515 KITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDL-EPNEFIWSILIAGCRSQGKLELGFY 573

Query: 500 AFRQMLEHNVTPN 512
           A  Q+L  N+ P 
Sbjct: 574 AAEQLL--NLKPK 584


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 183/530 (34%), Positives = 294/530 (55%), Gaps = 30/530 (5%)

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
           L + +  D +V ++ I MY   G    A  +F     R    WN +I G V+N +   A+
Sbjct: 135 LAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERAL 194

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
           E+F + +  D +  D  T +S L A +Q ++L+ G+ +H  +    +   V V NA+I+ 
Sbjct: 195 EVFGE-MAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDM 253

Query: 374 --------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSV 412
                               +DVVSW  MI A+V N    E + L  +M   G    + V
Sbjct: 254 YGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGV 313

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKN 471
           T+  LLSA +++ +    K THA  +R G+  +  +E+ LID YA+ G +K  R   E+ 
Sbjct: 314 TMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLER- 372

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
             G     TWNA ++GYT +G  ++A   F++M+  +V P+  T+AS+LPA     +++ 
Sbjct: 373 --GSWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKE 430

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           GK +H F +     ++  + T LID+YSK+G ++ A  +F  +PEK+ V +TT+I GY  
Sbjct: 431 GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSI 490

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG +  A+ L+  M   G +P+ +T   +L ACS+AG++DEG+++F  M+  + + P+ E
Sbjct: 491 HGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGE 550

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY C+ DMLGR G++ EA+  ++++  E +   +WG+LLG+C LH + E  EV AK+L +
Sbjct: 551 HYSCLVDMLGRAGRIEEAHRLIQDMPFEPST-SVWGALLGACVLHKNVEFGEVAAKRLFQ 609

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           +D  N+  G +VLL NIYA    W +V  VR+ M ERGL KE G S ++ 
Sbjct: 610 LDPENT--GSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEA 657



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 156/569 (27%), Positives = 260/569 (45%), Gaps = 65/569 (11%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIW-NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           C  GRP  A  L   + +P  V + N+++  +       EA+ +YS M+      + D+ 
Sbjct: 56  CACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMR------AFDHL 109

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T+    KACA  R  R G+AVHC  +        +V N+L++MY +C     AE      
Sbjct: 110 TFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAE------ 163

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                        VF  MR R VV+WN +++  VK      A+  F  M   G+     +
Sbjct: 164 ------------AVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRAT 211

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
            V+V PA +   D  +   V+ L+   G  +YV    V ++ I MY +    + AR++FD
Sbjct: 212 VVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVA---VKNALIDMYGKCRSLEDARRVFD 268

Query: 288 NCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +C  +++   W  MIG YV N+   EAI L  Q+L       + VT +  LSA + +   
Sbjct: 269 HCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSG 328

Query: 347 DLGQQLHAYII----KNFVALPVIVLNA------------VIERD---VVSWNTMISAFV 387
              +  HA  I    K+ +A+   +++A             +ER      +WN  +S + 
Sbjct: 329 KHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAETWNAALSGYT 388

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEG 446
            +G + + + L   M  +    DS T+ ++L A +   +   GK  H +LL  G +    
Sbjct: 389 VSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTE 448

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + LID+Y+K+G +  A  +F+     ++D   W  +IAGY+ +G    A + + +M+E
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLP--EKDVVAWTTIIAGYSIHGHARTAILLYDRMVE 506

Query: 507 HNVTPNVVTIASVLPACNPMGNIELG-------KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
               PN VTIA++L AC+  G I+ G       + +HG      L  N    + L+DM  
Sbjct: 507 SGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHG------LMPNGEHYSCLVDMLG 560

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++G I  A  +   +P + S +    +LG
Sbjct: 561 RAGRIEEAHRLIQDMPFEPSTSVWGALLG 589



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 18/263 (6%)

Query: 433 THAYLLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           T  +LLR HG+H       L  +Y   G   +A  +  +         + N+++  YT  
Sbjct: 38  TSGHLLRYHGLH------PLFMVYCACGRPSSAHNLLAQMPQPPPVSFS-NSLLRSYTGL 90

Query: 492 GLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
           G   EA   +  M   +H      +T      AC  +     G+ +H  ++      + +
Sbjct: 91  GCHREALAVYSAMRAFDH------LTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTY 144

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V  +LI MY   G +  A  VF  +  +  V++  +I G  ++G +ERAL +F  M   G
Sbjct: 145 VQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADG 204

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
           +  D  T V+VL AC+ A  ++ G  +  L++ +  +         + DM G+   + +A
Sbjct: 205 VGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDK-GLGDYVAVKNALIDMYGKCRSLEDA 263

Query: 670 YEFVKELGEEGNVLEIWGSLLGS 692
                    + +V+  W +++G+
Sbjct: 264 RRVFDHCKHDKDVVS-WTAMIGA 285


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 189/531 (35%), Positives = 311/531 (58%), Gaps = 38/531 (7%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH--- 353
           WN++I    ++    EA+  F  + +L  +     +F  A+ A S L ++  G+Q H   
Sbjct: 44  WNSVIADLARSGDSAEALRAFSSMRKL-SLYPTRSSFPCAIKACSSLLDIFSGKQTHQQA 102

Query: 354 ---AYIIKNFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNG--LDDE 394
               Y    FV+  +IV+              + + +R++VSW +MI  +  NG  LD  
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162

Query: 395 GL---MLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-- 448
            L   +L+ E      M +DS+ + +++SA S +  + + +  H+++++ G    G+   
Sbjct: 163 SLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD-RGVSVG 221

Query: 449 SYLIDMYAKSGL--IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML- 505
           + L+D YAK G   +  AR+IF++    D+D+ ++N++++ Y Q+G+  EAF  FR+++ 
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQ--IVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIK 279

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           E  VT N +T+++VL A +  G + +GK +H   IR  L+ +V VGTS+IDMY K G + 
Sbjct: 280 EKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F ++  KN  ++T MI GYG HG + +AL LF +M   G+ P+ ITFV+VL+ACS
Sbjct: 340 TARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AGL D G   F+ M+  + ++P  EHY C+ D+LGR G + +AY+ ++++  E + + I
Sbjct: 400 HAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSI-I 458

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W SLL +CR+H + ELAE+   +L E+D  N   GY++LLS+IYA+ G W++V++VR  M
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDPSNC--GYYMLLSHIYADSGRWKDVERVRMTM 516

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + RGL K  G S +++ G V+ F   D+EHPQ  KIYE L  L  ++  AG
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 231/466 (49%), Gaps = 66/466 (14%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + +V +WN++++   ++    EA+R F  M ++ + P+  SF     A SSL D  S   
Sbjct: 38  KTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQ 97

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            +      G  Y +D+FV+S+ I MY+  G  + ARK+FD   +RN   W +MI GY  N
Sbjct: 98  THQQAFVFG--YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 308 NHPVEAIELFVQVL--ELDE---IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---- 358
            + ++A+ LF  +L  E D+   +  D +  +S +SA S++    L + +H+++IK    
Sbjct: 156 GNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFD 215

Query: 359 ------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                               VA+   + + ++++D VS+N+++S + Q+G+ +E   +  
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 401 EMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKS 458
            + K+  +  + +T++ +L A S+     +GK  H  ++R G+  + +  + +IDMY K 
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G ++TAR  F++    +++  +W AMIAGY  +G   +A   F  M++  V PN +T  S
Sbjct: 336 GRVETARLAFDRMK--NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           VL AC+  G  ++G   H F+                 M  + GV            E  
Sbjct: 394 VLAACSHAGLHDVG--WHWFNA----------------MKGRFGV------------EPG 423

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
              Y  M+   G+ G  ++A  L + MK   +EPD+I + ++L+AC
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQKMK---MEPDSIIWSSLLAAC 466



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 230/508 (45%), Gaps = 62/508 (12%)

Query: 37  LKTPTIRSRLSKICQ--EGRPHLARQ----LFDSITRPTTVI-WNTIIIGFVCNNLPYEA 89
           +K P+ ++    + +      H  RQ    LF+     T V  WN++I     +    EA
Sbjct: 1   MKVPSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEA 60

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           +  +S M+K S Y +    ++   +KAC+   ++  GK  H            FV ++L+
Sbjct: 61  LRAFSSMRKLSLYPT--RSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALI 118

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MYSTC    DA                   KVFD + +RN+V+W +++  Y      ++
Sbjct: 119 VMYSTCGKLEDAR------------------KVFDEIPKRNIVSWTSMIRGYDLNGNALD 160

Query: 210 AVRQFRMML------RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           AV  F+ +L         +   ++  V+V  A S +      + ++  ++K G  +   +
Sbjct: 161 AVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG--FDRGV 218

Query: 264 FVASSAIFMYAE--LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
            V ++ +  YA+   G    ARKIFD  ++++   +N+++  Y Q+    EA ++F +++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLI 278

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------- 373
           +   + F+ +T  + L AVS    L +G+ +H  +I+  +   VIV  ++I+        
Sbjct: 279 KEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       ++V SW  MI+ +  +G   + L L   M   G   + +T  ++L+A 
Sbjct: 339 ETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398

Query: 422 SNLRNQDVGKQ-THAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
           S+    DVG    +A   R G+   G+E Y  ++D+  ++G ++ A  + +K    + D 
Sbjct: 399 SHAGLHDVGWHWFNAMKGRFGVE-PGLEHYGCMVDLLGRAGFLQKAYDLIQKMKM-EPDS 456

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             W++++A    +  +E A ++  ++ E
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFE 484



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 177/373 (47%), Gaps = 24/373 (6%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           V + DV SWN++I+   ++G   E L     M+K        +    + A S+L +   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           KQTH      G   +  + S LI MY+  G ++ AR++F+  +   R+  +W +MI GY 
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD--EIPKRNIVSWTSMIRGYD 153

Query: 490 QNGLLEEAFVAFRQML------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
            NG   +A   F+ +L      +  +  + + + SV+ AC+ +    L + +H F I+  
Sbjct: 154 LNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG 213

Query: 544 LDQNVFVGTSLIDMYSKSGV--INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
            D+ V VG +L+D Y+K G   +  A  +F +I +K+ V+Y +++  Y Q GMS  A  +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDV 273

Query: 602 FRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD---LMQQEYKIQPSTEHYCCVA 657
           FR + K   +  + IT   VL A S++G +  G  I D    M  E  +   T     + 
Sbjct: 274 FRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS----II 329

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           DM  + G+ VE      +  +  NV   W +++    +HGH+  A  +   +++   R  
Sbjct: 330 DMYCKCGR-VETARLAFDRMKNKNVRS-WTAMIAGYGMHGHAAKALELFPAMIDSGVR-- 385

Query: 718 MPGYHVLLSNIYA 730
            P Y   +S + A
Sbjct: 386 -PNYITFVSVLAA 397



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 37/420 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM----KKSSPYTSCDNY 108
           G+   AR++FD I +   V W ++I G+  N    +A+ L+  +             D+ 
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSM 184

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
              SV+ AC+      + +++H   I+   +    V N+LL+ Y+           G   
Sbjct: 185 GMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKG---------GEGG 235

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STI 227
           V V         K+FD +  ++ V++N+I+S Y ++    EA   FR +++  +   + I
Sbjct: 236 VAVAR-------KIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCI 288

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +   V  A+S  G  +    ++  ++++G E  +D+ V +S I MY + G  + AR  FD
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLE--DDVIVGTSIIDMYCKCGRVETARLAFD 346

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
               +N   W  MI GY  + H  +A+ELF  +++   +  + +TF+S L+A S     D
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMID-SGVRPNYITFVSVLAACSHAGLHD 405

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +G      +   F           +E  +  +  M+    + G   +   L+ +M+ +  
Sbjct: 406 VGWHWFNAMKGRF----------GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEP- 454

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
             DS+  ++LL+A    +N ++ + + A L        G    L  +YA SG  K   ++
Sbjct: 455 --DSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERV 512


>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 185/556 (33%), Positives = 300/556 (53%), Gaps = 62/556 (11%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           WN +I  YV+N   VEA+ ++  +L   +I  D+ T+ S L A  +  + + G ++H  I
Sbjct: 150 WNLLISAYVRNGFFVEALCVYKNMLN-KKIEPDEYTYPSVLKACGESLDFNSGLEVHRSI 208

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
             + +   + V NA++                     RD VSWNT+IS +   G+  E  
Sbjct: 209 EASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAF 268

Query: 397 MLVYEMQKQG----------------------------------FMIDSVTVTALLSAAS 422
            L   MQ++G                                    +D++ +   L+A S
Sbjct: 269 QLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACS 328

Query: 423 NLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           ++    +GK+ H + +R     F+ +++ LI MY++   +  A  +F + +  ++   TW
Sbjct: 329 HIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTE--EKGLITW 386

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           NAM++GY      EE    FR+ML+  + PN VTIASVLP C  + N++ GK+ H + ++
Sbjct: 387 NAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMK 446

Query: 542 Y-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
           +   ++ + +  +L+DMYS+SG +  A  VF  + +++ VTYT+MILGYG  G  E  L 
Sbjct: 447 HKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLK 506

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M    I+PD +T VAVL+ACS++GLV +G  +F  M   + I P  EHY C+AD+ 
Sbjct: 507 LFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLF 566

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
           GR G + +A EF+  +  +     +W +LLG+CR+HG++E+ E  A KLLEM   +S  G
Sbjct: 567 GRAGLLNKAKEFITGMPYKPTS-AMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHS--G 623

Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
           Y+VL++N+YA  G+W  + +VR  MR  G+RK  GC+W+DVG   + F   D  +P + +
Sbjct: 624 YYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASE 683

Query: 781 IYEMLERLAMEMRNAG 796
           IY +++ L   M++AG
Sbjct: 684 IYPLMDGLNELMKDAG 699



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 138/592 (23%), Positives = 258/592 (43%), Gaps = 92/592 (15%)

Query: 80  FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           FV +     A   + Q++  +  +    +   S+L AC   ++L  GK +H   I    +
Sbjct: 54  FVTHGHLTNAFKTFFQIQHHAASSHLLLHPIGSLLLACTHFKSLSQGKQLHAQVISLGLD 113

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            +  + + L+N Y+     +DA+ V                   ++    + + WN ++S
Sbjct: 114 QNPILVSRLVNFYTNVNLLVDAQFVT------------------ESSNTLDPLHWNLLIS 155

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
            YV+   +VEA+  ++ ML   I P   ++ +V  A     D+ S   V+  +     E+
Sbjct: 156 AYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEW 215

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
              LFV ++ + MY   G  + AR +FDN   R++  WNT+I  Y       EA +LF  
Sbjct: 216 --SLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGS 273

Query: 320 V----LELDEIVF-----------------------------DDVTFLSALSAVSQLQEL 346
           +    +E++ I++                             D +  +  L+A S +  +
Sbjct: 274 MQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAI 333

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAF 386
            LG+++H + ++    +   V NA+I                    E+ +++WN M+S +
Sbjct: 334 KLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGY 393

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
                 +E   L  EM ++G   + VT+ ++L   + + N   GK+ H Y+++H   FE 
Sbjct: 394 AHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHK-QFEE 452

Query: 447 ---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
              + + L+DMY++SG +  AR++F+      RD+ T+ +MI GY   G  E     F +
Sbjct: 453 YLLLWNALVDMYSRSGRVLEARKVFDSLTK--RDEVTYTSMILGYGMKGEGETTLKLFEE 510

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG-----TSLIDMY 558
           M +  + P+ VT+ +VL AC+  G +  G+ L     + ++D +  V        + D++
Sbjct: 511 MCKLEIKPDHVTMVAVLTACSHSGLVAQGQVL----FKRMIDVHGIVPRLEHYACMADLF 566

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILG----YGQHGMSERALSLFRSMK 606
            ++G++N A      +P K +      +LG    +G   M E A      MK
Sbjct: 567 GRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMK 618



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 209/492 (42%), Gaps = 83/492 (16%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           WN +I  +V N    EA+ +Y  M  KK  P    D YTY SVLKAC E+ +   G  VH
Sbjct: 150 WNLLISAYVRNGFFVEALCVYKNMLNKKIEP----DEYTYPSVLKACGESLDFNSGLEVH 205

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
                     S FV+N+L++MY                    + K ++   +FD M RR+
Sbjct: 206 RSIEASSMEWSLFVHNALVSMYGR------------------FGKLEIARHLFDNMPRRD 247

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA----- 245
            V+WNTI+S Y     + EA + F  M   G+  + I +  +       G+++ A     
Sbjct: 248 SVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLIS 307

Query: 246 -----------DVVYGL-------LVKLGSEYVN-------DLF--VASSAIFMYAELGC 278
                       +V GL        +KLG E          D+F  V ++ I MY+    
Sbjct: 308 QMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRD 367

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              A  +F    E+    WN M+ GY   +   E   LF ++L+ + +  + VT  S L 
Sbjct: 368 LGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQ-EGMEPNYVTIASVLP 426

Query: 339 AVSQLQELDLGQQLHAYIIKN---------FVALPVI------------VLNAVIERDVV 377
             +++  L  G++ H YI+K+         + AL  +            V +++ +RD V
Sbjct: 427 LCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEV 486

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           ++ +MI  +   G  +  L L  EM K     D VT+ A+L+A S+      G+     +
Sbjct: 487 TYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRM 546

Query: 438 LR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +  HGI    +E Y  + D++ ++GL+  A++ F          A W  ++     +G  
Sbjct: 547 IDVHGI-VPRLEHYACMADLFGRAGLLNKAKE-FITGMPYKPTSAMWATLLGACRIHGNT 604

Query: 495 EEAFVAFRQMLE 506
           E    A  ++LE
Sbjct: 605 EMGEWAAGKLLE 616



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 28/348 (8%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
           + +LL A ++ ++   GKQ HA ++  G+     + S L++ Y    L+  A+ + E ++
Sbjct: 84  IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           +   D   WN +I+ Y +NG   EA   ++ ML   + P+  T  SVL AC    +   G
Sbjct: 144 T--LDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSG 201

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            ++H       ++ ++FV  +L+ MY + G +  A ++F  +P ++SV++ T+I  Y   
Sbjct: 202 LEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASR 261

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G+ + A  LF SM+  G+E + I +  +   C ++G     LQ+   M+       ++ H
Sbjct: 262 GIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMR-------TSIH 314

Query: 653 YCCVADMLG----------RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
              +A ++G          ++GK +  +          NV     ++   CR  GH+ + 
Sbjct: 315 LDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFI- 373

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
                 L        +  ++ +LS  YA    +E V  + +EM + G+
Sbjct: 374 ------LFHRTEEKGLITWNAMLSG-YAHMDRYEEVTFLFREMLQEGM 414



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 186/430 (43%), Gaps = 40/430 (9%)

Query: 34  IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRP----TTVIWNTIIIGFVCNNLPYEA 89
           +P+  + +  + +S     G    A QLF S+         +IWNTI  G + +     A
Sbjct: 243 MPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGA 302

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           + L SQM+ S      D       L AC+    +++GK +H H +R   +    V N+L+
Sbjct: 303 LQLISQMRTS---IHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALI 359

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
            MYS C        +G  ++            +F     + ++ WN ++S Y   +RY E
Sbjct: 360 TMYSRCRD------LGHAFI------------LFHRTEEKGLITWNAMLSGYAHMDRYEE 401

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
               FR ML+ G+ P+ ++  +V P  + + + +     +  ++K   ++   L + ++ 
Sbjct: 402 VTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMK-HKQFEEYLLLWNAL 460

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           + MY+  G    ARK+FD+  +R+   + +MI GY         ++LF ++ +L EI  D
Sbjct: 461 VDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKL-EIKPD 519

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
            VT ++ L+A S    +  GQ L   +I          ++ ++ R +  +  M   F + 
Sbjct: 520 HVTMVAVLTACSHSGLVAQGQVLFKRMID---------VHGIVPR-LEHYACMADLFGRA 569

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
           GL ++    +  M    +   S     LL A     N ++G+     LL       G   
Sbjct: 570 GLLNKAKEFITGMP---YKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYV 626

Query: 450 YLIDMYAKSG 459
            + +MYA +G
Sbjct: 627 LIANMYAAAG 636


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 313/565 (55%), Gaps = 41/565 (7%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            +A+  IF YA       +R +FD+   +N  +WN++I GY +N    EA +LF Q+   
Sbjct: 59  LLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSS 118

Query: 324 DEIVFDDVTFLSALSAVS-QLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------- 373
           D ++ DD T LS LS VS +L  L  G+ +H   I+       +V N+++          
Sbjct: 119 D-VLPDDFT-LSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFE 176

Query: 374 -----------RDVVSWNTMISAFVQNG---LDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                      R+  SWN +I+ +  +G     +E    V +MQ      D+ T+++LL 
Sbjct: 177 ESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLP 236

Query: 420 AASNLRNQ-DVGKQTHAYLLRHGIHFEGMES------YLIDMYAKSGLIKTARQIFEKND 472
                + + D G++ H Y++++ +   G++S       LIDMY++S  +   R++F++  
Sbjct: 237 LCDGDKGKWDYGRELHCYIVKNELVL-GLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMK 295

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIEL 531
              R+  +W AMI GY +NG  +EA   FR M +   + PN V++ SVLPAC+    +  
Sbjct: 296 C--RNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLS 353

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE-KNSVTYTTMILGYG 590
           G+Q+HGF++R  L+  V +  +LIDMYSK G ++ A  VF      K+++++++MI GYG
Sbjct: 354 GRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYG 413

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG  + A+ L+  M   GI PD IT V +LSACS +GLV+EGL I+  +  +Y I+P+ 
Sbjct: 414 LHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTL 473

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           E + C+ DMLGR G++  A +F+K +  E     +WG+L+    +HG  E+ E+  + L+
Sbjct: 474 EIFACIVDMLGRAGQLDPALDFIKAMPVEPGP-SVWGALVSCSIIHGDLEMQELAYRFLI 532

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           +++  N  P  +V +SN+YA    W+ V +VR+ M+++ LRK  GCSWI +    + F  
Sbjct: 533 QLEPEN--PSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCFYV 590

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNA 795
            D+ HP +  IY ML+ L + M +A
Sbjct: 591 ADKAHPSATSIYNMLDDLLLTMNDA 615



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 232/505 (45%), Gaps = 60/505 (11%)

Query: 49  ICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY 108
           ICQ   P+ +R +FDS+      +WN++I G+  N L  EA  L++QM  S      D++
Sbjct: 70  ICQH--PYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLP--DDF 125

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           T S++ K  +E   L  GK++H   IR        V NS+++MY  C             
Sbjct: 126 TLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKC------------- 172

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTER--YVEAVRQFRMMLRMG-IRPS 225
                  ++   KVFD M  RN  +WN +++ Y  +    + E   +F   ++M  +RP 
Sbjct: 173 -----GNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVRPD 227

Query: 226 TISFVNVFPALSS-LGDYKSADVVYGLLVK----LGSEYVNDLFVASSAIFMYAELGCFD 280
             +  ++ P      G +     ++  +VK    LG +  +D+ +    I MY+      
Sbjct: 228 AYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLD--SDVHLGCCLIDMYSRSNKVV 285

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
             R++FD    RN   W  MI GYV+N    EA+ LF  +  +D I  + V+ +S L A 
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPAC 345

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------------------RDVVSW 379
           S    L  G+Q+H + ++  +   V + NA+I+                     +D +SW
Sbjct: 346 SSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISW 405

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           ++MIS +  +G   E ++L  +M + G   D +T   +LSA S     + G   ++ ++ 
Sbjct: 406 SSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVIN 465

Query: 440 -HGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
            +GI    +E +  ++DM  ++G +  A   F K    +   + W A+++    +G LE 
Sbjct: 466 DYGIE-PTLEIFACIVDMLGRAGQLDPALD-FIKAMPVEPGPSVWGALVSCSIIHGDLEM 523

Query: 497 AFVAFRQM--LEHNVTPNVVTIASV 519
             +A+R +  LE     N V+I+++
Sbjct: 524 QELAYRFLIQLEPENPSNYVSISNL 548



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 170/344 (49%), Gaps = 33/344 (9%)

Query: 39  TPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN---NLPYEAILLYSQ 95
           T    S +S  C+ G    +R++FD +T   +  WN +I G+  +   N   E      Q
Sbjct: 159 TVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQ 218

Query: 96  MKKSSPYTSCDNYTYSSVLKAC-AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
           M+        D YT SS+L  C  +      G+ +HC+ ++          N L      
Sbjct: 219 MQMDE--VRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVK----------NEL------ 260

Query: 155 CLSSLDAEMVGLKYVEVD-YSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
            +  LD++ V L    +D YS+ + V    +VFD M+ RNV +W  +++ YV+     EA
Sbjct: 261 -VLGLDSD-VHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEA 318

Query: 211 VRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           +  FR M +  GI P+ +S V+V PA SS     S   ++G  V+   E  N++ + ++ 
Sbjct: 319 LSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVR--KELNNEVSLCNAL 376

Query: 270 IFMYAELGCFDFARKIF-DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
           I MY++ G  D AR++F D+ L ++   W++MI GY  +    EAI L+ ++L+   I  
Sbjct: 377 IDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAG-IRP 435

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           D +T +  LSA S+   ++ G  +++ +I ++   P + + A I
Sbjct: 436 DMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACI 479



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 47/109 (43%)

Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +++L +Q H   +   L QN  + T LI  Y+      ++  VF  +  KN   + ++I 
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           GY ++ +   A  LF  M    + PD  T   +    S  G +  G  I
Sbjct: 98  GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSI 146


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 187/556 (33%), Positives = 298/556 (53%), Gaps = 60/556 (10%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WNTM  G+  ++ PV A++L+V ++ L  ++ +  TF   L + 
Sbjct: 43  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFLLKSC 101

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------- 373
           ++ +    GQQ+H +++K    L + V  ++I                            
Sbjct: 102 AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYT 161

Query: 374 ------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                   +DVVSWN MIS + + G   E L L  +M K     
Sbjct: 162 ALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP 221

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T+  ++SA +   + ++G+Q H+++  HG      + + LID+Y+K G ++TA  +F
Sbjct: 222 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 281

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E      +D  +WN +I GYT   L +EA + F++ML    TPN VT+ S+LPAC  +G 
Sbjct: 282 EGLPY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339

Query: 529 IELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           I++G+ +H +  + L  +     + TSLIDMY+K G I  A  VF  I  K+  ++  MI
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 399

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            G+  HG ++ +  +F  M+  GIEPD ITFV +LSACS++G++D G  IF  M Q+YK+
Sbjct: 400 FGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 459

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ EL E  A
Sbjct: 460 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMHGNVELGESFA 518

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           + L++++  N  PG +VLLSNIYA  G W  V   R  + ++G++K  GCS I++   V+
Sbjct: 519 QNLIKIEPEN--PGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVH 576

Query: 767 RFASKDQEHPQSHKIY 782
            F   D+ HP++ +IY
Sbjct: 577 EFIIGDKFHPRNREIY 592



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 252/563 (44%), Gaps = 80/563 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWNT+  G   ++ P  A+ LY  M         ++YT+ 
Sbjct: 39  DGLPY-AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLP--NSYTFP 95

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++  + G+ +H H ++   +   +V+ SL++MY       DA  V  +    
Sbjct: 96  FLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHR 155

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              K+FD +  ++VV+WN ++S Y +T  Y EA+  F+ M+
Sbjct: 156 DVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 215

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   + V V  A +  G  +    V+  +   G  + ++L + ++ I +Y++ G 
Sbjct: 216 KTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG--FGSNLKIVNALIDLYSKCGE 273

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 274 LETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILP 332

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVI----------------------VLNAVIERDV 376
           A + L  +D+G+ +H YI K    +                         V N+++ + +
Sbjct: 333 ACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 392

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SWN MI  F  +G  D    +   M+K G   D +T   LLSA S+    D+G+     
Sbjct: 393 SSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 452

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           + +       +E Y  +ID+   SGL K A ++              N M          
Sbjct: 453 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI-------------NTM---------- 489

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
                         + P+ V   S+L AC   GN+ELG+      I+ +  +N      L
Sbjct: 490 -------------EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIK-IEPENPGSYVLL 535

Query: 555 IDMYSKSGVINYAANVFAKIPEK 577
            ++Y+ +G  N  AN  A + +K
Sbjct: 536 SNIYATAGRWNEVANTRALLNDK 558


>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
 gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 175/520 (33%), Positives = 287/520 (55%), Gaps = 26/520 (5%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           +D+ VA+  + MYA  G  D A+++F     R+   W+ +I  +VQ+ +P EA+ LF + 
Sbjct: 21  SDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLF-RS 79

Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NF 360
           ++ + +  + V  LS+L A +++  L LG+ +H   +K                     F
Sbjct: 80  MQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGF 139

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
            AL + + N +  +DVV+WN MI+ + Q G     L + +++Q      +S T+  LL A
Sbjct: 140 FALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPA 199

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
            + L + D G   H  +++ G   E  +++ LIDMYAK G +  A  +F +     +D+ 
Sbjct: 200 FALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGC-RKDEV 258

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +WN MIAGY  +G   +AF AF QM   N+ PN+VTI +VLPA   +  +  G  LH + 
Sbjct: 259 SWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYV 318

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
           IR        VG  LIDMY+K G ++++  +F ++  K++V++  M+ GY  HG    A+
Sbjct: 319 IRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAI 378

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
            LF  M+   I  D+ +F+ VLSAC +AGL+ EG +IFD M ++++++P  EHY C+AD+
Sbjct: 379 ELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADL 438

Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
           LGR G   E  + +K +  E +   +WG+LLG+  +H + +LAE     L +++ +N   
Sbjct: 439 LGRAGLFNEVLDLIKSMPMEPDA-GVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLT- 496

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            ++  LSN YA  G W +V   R ++ + GLRK  G SW+
Sbjct: 497 -HYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 212/481 (44%), Gaps = 49/481 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A+QLF  I     V W+ II  FV +  P EA+ L+  M+        +     S
Sbjct: 37  GEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEG--LQANKVILLS 94

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            L ACAE  +L++GK++HC  ++   +    V  +L++MY+ C                 
Sbjct: 95  SLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKC----------------- 137

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
              + L   +F+ M  ++VV WN +++ Y +      A+  F  +    + P++ + V +
Sbjct: 138 -GFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGL 196

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA + L D      ++G ++K G E  ++  V ++ I MYA+ G    A  +F     R
Sbjct: 197 LPAFALLNDLDQGSCIHGKIIKCGFE--SECHVKTALIDMYAKCGSLSGAEFLFHRTGCR 254

Query: 293 NTEV-WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
             EV WN MI GY+ + H ++A   F Q ++L+ I  + VT ++ L AV+ L  L  G  
Sbjct: 255 KDEVSWNVMIAGYMHSGHAIDAFSAFCQ-MKLENIQPNIVTIVTVLPAVAHLSALRAGMT 313

Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
           LHAY+I+        V N +I+                    +D VSWN M++ +  +G 
Sbjct: 314 LHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGR 373

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY- 450
               + L   MQ     +DS +   +LSA  +      G++    + +       +E Y 
Sbjct: 374 GSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYA 433

Query: 451 -LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEH 507
            + D+  ++GL      +  K+   + D   W A++   T +  ++ A  A   +  LEH
Sbjct: 434 CMADLLGRAGLFNEVLDLI-KSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEH 492

Query: 508 N 508
            
Sbjct: 493 K 493



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 58/94 (61%)

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G ++H F+ +  +D +V V T ++ MY++ G ++ A  +F +I  ++ V ++ +I  + Q
Sbjct: 7   GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQ 66

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            G  + ALSLFRSM+  G++ + +  ++ L AC+
Sbjct: 67  SGYPQEALSLFRSMQNEGLQANKVILLSSLPACA 100


>gi|347954452|gb|AEP33726.1| chlororespiratory reduction 21, partial [Aethionema cordifolium]
          Length = 618

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 205/641 (31%), Positives = 328/641 (51%), Gaps = 70/641 (10%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           KVFD M  RNVVAWN+++  YV+     EA+R    M+  GI P+ ++      A + +G
Sbjct: 14  KVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVTVSTCLSASAHMG 73

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +     + + +  G E  N   + +S +  Y ++G  + A  IFD  +E++   WN +
Sbjct: 74  GIEEGKQSHAIAIVNGLELDN--ILGTSILNFYCKVGLIECAEMIFDKMIEKDVVTWNLL 131

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GYVQ     +AI    +++ L+ + FD VT  + +SA +  Q+L+LG+QL  Y ++N 
Sbjct: 132 ISGYVQQGLIEDAI-YKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQLQCYCLRNS 190

Query: 361 VALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +   ++                    V ++ + +D++ WNT+++A+ ++    E L L Y
Sbjct: 191 LESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSHSGEALRLFY 250

Query: 401 EMQKQGFMIDSVTVTAL---LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           EMQ     ++SVT   +   L   S LR    G+ T A  +   I   G+   LI     
Sbjct: 251 EMQ-----LESVTPNVISWNLIILSLLR---XGQVTEAKXMFLQIQSTGISPNLI----- 297

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
                                 +W  ++ G  QNG  EEA + F++M E  + PN  +  
Sbjct: 298 ----------------------SWTTLMNGLVQNGYSEEAIMYFKKMQESGLRPNPFSXT 335

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
             L AC+ + ++  G+ +HG+ IR      +V + TSL+DMY+K G IN A  VF     
Sbjct: 336 VALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERVFGNKLY 395

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
                Y  MI  YG +G  E A++L+R ++   I+PD ITF  +LSAC++ G V++ +QI
Sbjct: 396 SELPLYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQAIQI 455

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F  M  ++ +QP  EHY  + D+    G++ EA   VK++  E +   I  SLL  C+  
Sbjct: 456 FTDMVSKHGMQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMI-QSLLAYCKKE 514

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
             +EL + ++K LLE +  NS  G +V +SN YA  GNWE V K+R+ M+E+GL+K+ GC
Sbjct: 515 HKTELVDYLSKYLLESEPDNS--GNYVTISNAYAAGGNWEEVMKMREMMKEKGLKKKPGC 572

Query: 757 SWIDVGGY-----VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           SWI V G      V+ F + D+ H + ++I  ML  L  +M
Sbjct: 573 SWIQVAGRQEKEEVHVFVANDKTHLKYNEIEMMLALLLYDM 613



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 280/593 (47%), Gaps = 47/593 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD +     V WN++++G+V N +  EAI L S M       +    T S+ L A 
Sbjct: 12  ARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPT--RVTVSTCLSAS 69

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +  GK  H   I         +  S+LN Y        AEM              
Sbjct: 70  AHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEM-------------- 115

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  ++VV WN ++S YV+     +A+ + ++M    ++   ++   +  A +
Sbjct: 116 ----IFDKMIEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAA 171

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              D      +    ++   E  +D+  AS+ + MYA+ G    A+K+FD+ + ++  +W
Sbjct: 172 HTQDLNLGKQLQCYCLRNSLE--SDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLW 229

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT++  Y +++H  EA+ LF + ++L+ +  + +++      +  L  L  GQ   A  +
Sbjct: 230 NTLLAAYAESSHSGEALRLFYE-MQLESVTPNVISW-----NLIILSLLRXGQVTEAKXM 283

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
             F+ +     +  I  +++SW T+++  VQNG  +E +M   +MQ+ G   +  + T  
Sbjct: 284 --FLQIQ----STGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQESGLRPNPFSXTVA 337

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LSA SNL +   G+  H Y++R+  H     +E+ L+DMYAK G I  A ++F     G+
Sbjct: 338 LSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERVF-----GN 392

Query: 476 R---DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
           +   +   +NAMI+ Y   G +EEA   +R +   ++ P+ +T  ++L ACN  G++   
Sbjct: 393 KLYSELPLYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQA 452

Query: 533 KQLHGFSIRYLLDQNVFVGTSL-IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            Q+    +     Q       L +D+++ SG I  A  +   +P +        +L Y +
Sbjct: 453 IQIFTDMVSKHGMQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMIQSLLAYCK 512

Query: 592 HGMSERALSLFRSMKGCGIEPD-AITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
               +  L  + S      EPD +  +V + +A +  G  +E +++ ++M+++
Sbjct: 513 KE-HKTELVDYLSKYLLESEPDNSGNYVTISNAYAAGGNWEEVMKMREMMKEK 564



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 226/477 (47%), Gaps = 59/477 (12%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + G  D ARK+FD   ERN   WN+++ GYVQN    EAI L   ++  + I    V
Sbjct: 2   MYGKCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMN-EGIEPTRV 60

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI--------------------VLNAV 371
           T  + LSA + +  ++ G+Q HA  I N + L  I                    + + +
Sbjct: 61  TVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKM 120

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           IE+DVV+WN +IS +VQ GL ++ +     M+ +    D VT++ L+SAA++ ++ ++GK
Sbjct: 121 IEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGK 180

Query: 432 QTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           Q   Y LR+ +  + +  S  +DMYAK G I  A+++F+   +  +D   WN ++A Y +
Sbjct: 181 QLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDS--TVHKDLMLWNTLLAAYAE 238

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +    EA   F +M   +VTPNV++   ++ +    G +   K +      +L  Q+  +
Sbjct: 239 SSHSGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXM------FLQIQSTGI 292

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
             +LI                         ++TT++ G  Q+G SE A+  F+ M+  G+
Sbjct: 293 SPNLI-------------------------SWTTLMNGLVQNGYSEEAIMYFKKMQESGL 327

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P+  +    LSACS    +  G  I   + +      S      + DM  + G + +A 
Sbjct: 328 RPNPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAE 387

Query: 671 E-FVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS 726
             F  +L  E   L ++ +++ +  L+G  E A  + + L  +D +     +  LLS
Sbjct: 388 RVFGNKLYSE---LPLYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLS 441



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 134/251 (53%), Gaps = 13/251 (5%)

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
           DMY K G++  AR++F++    +R+   WN+++ GY QNG+ EEA      M+   + P 
Sbjct: 1   DMYGKCGILDDARKVFDR--MPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPT 58

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
            VT+++ L A   MG IE GKQ H  +I   L+ +  +GTS+++ Y K G+I  A  +F 
Sbjct: 59  RVTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFD 118

Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
           K+ EK+ VT+  +I GY Q G+ E A+   + M+   ++ D +T   ++SA ++   ++ 
Sbjct: 119 KMIEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNL 178

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           G Q+     Q Y ++ S E     A    DM  + G++++A +       +   L +W +
Sbjct: 179 GKQL-----QCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKD--LMLWNT 231

Query: 689 LLGSCRLHGHS 699
           LL +     HS
Sbjct: 232 LLAAYAESSHS 242



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 198/450 (44%), Gaps = 79/450 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI     M+  +   
Sbjct: 99  SILNFYCKVGLIECAEMIFDKMIEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKF 158

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
            C   T S+++ A A T++L +GK + C+ +R          ++ ++MY+ C   LDA+ 
Sbjct: 159 DC--VTISTLMSAAAHTQDLNLGKQLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAK- 215

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVFD+   ++++ WNT+++ Y ++    EA+R F  M    + 
Sbjct: 216 -----------------KVFDSTVHKDLMLWNTLLAAYAESSHSGEALRLFYEMQLESVT 258

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ IS+  +  +L   G    A  ++             L + S+ I             
Sbjct: 259 PNVISWNLIILSLLRXGQVTEAKXMF-------------LQIQSTGI------------- 292

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W T++ G VQN +  EAI  F ++ E   +  +  +   ALSA S L
Sbjct: 293 -------SPNLISWTTLMNGLVQNGYSEEAIMYFKKMQE-SGLRPNPFSXTVALSACSNL 344

Query: 344 QELDLGQQLHAYIIKN-----FVALPVIVLNAV--------IER--------DVVSWNTM 382
             L  G+ +H YII+N      V+L   +L+           ER        ++  +N M
Sbjct: 345 ASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERVFGNKLYSELPLYNAM 404

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHG 441
           ISA+   G  +E + L  +++      D++T T LLSA ++  + +   Q    ++ +HG
Sbjct: 405 ISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQAIQIFTDMVSKHG 464

Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFE 469
           +    +E Y  ++D++A SG I+ A +I +
Sbjct: 465 MQ-PCLEHYGLMVDLFASSGEIEEALRIVK 493


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 307/555 (55%), Gaps = 29/555 (5%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+    I  Y + G    ARK+FD    R+   WN+MI  ++ +    EA+E +  +L +
Sbjct: 36  FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNML-M 94

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAY-------IIKNFVALPVI---------- 366
           + ++ D  TF +   A SQL  +  GQ+ H         ++  FVA  ++          
Sbjct: 95  EGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMR 154

Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
               V   V+E+DVV +  +I  + Q+GLD E L +  +M  +G   +  T+  +L    
Sbjct: 155 DAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCG 214

Query: 423 NLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           NL +   G+  H  +++ G+      ++ L+ MY++  +I+ + ++F + D  +  Q TW
Sbjct: 215 NLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYAN--QVTW 272

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
            + + G  QNG  E A   FR+M+  +++PN  T++S+L AC+ +  +E+G+Q+H  +++
Sbjct: 273 TSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMK 332

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
             LD N + G +LI++Y K G ++ A +VF  + E + V   +MI  Y Q+G    AL L
Sbjct: 333 LGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALEL 392

Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
           F  +K  G+ P+ +TF+++L AC+ AGLV+EG QIF  ++  + I+ + +H+ C+ D+LG
Sbjct: 393 FERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLG 452

Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGY 721
           R  ++ EA   ++E+     VL  W +LL SC++HG  E+AE V  K+LE+   +   G 
Sbjct: 453 RSRRLEEAAMLIEEVRNPDVVL--WRTLLNSCKIHGEVEMAEKVMSKILELAPGDG--GT 508

Query: 722 HVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKI 781
           H+LL+N+YA  G W  V +++  +R+  L+K    SW+DV   V+ F + D  HP+S +I
Sbjct: 509 HILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEI 568

Query: 782 YEMLERLAMEMRNAG 796
           +EML  L  +++  G
Sbjct: 569 FEMLHGLMKKVKTLG 583



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 249/519 (47%), Gaps = 54/519 (10%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           YSS++   A T++L   +AVH + I+   + S F+ + L++ Y  C S  +A        
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYS-FLGHKLIDGYIKCGSLAEAR------- 55

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      K+FD +  R++V WN+++S ++   +  EAV  +  ML  G+ P   +F
Sbjct: 56  -----------KLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTF 104

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  A S LG  +     +GL V LG E V D FVAS+ + MYA+      A  +F   
Sbjct: 105 SAISKAFSQLGLIRHGQRAHGLAVVLGLE-VLDGFVASALVDMYAKFDKMRDAHLVFRRV 163

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           LE++  ++  +I GY Q+    EA+++F  ++    +  ++ T    L     L +L  G
Sbjct: 164 LEKDVVLFTALIVGYAQHGLDGEALKIFEDMVN-RGVKPNEYTLACILINCGNLGDLVNG 222

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
           Q +H  ++K                    N +   + V N +   + V+W + +   VQN
Sbjct: 223 QLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQN 282

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI---HFEG 446
           G ++  + +  EM +     +  T++++L A S+L   +VG+Q HA  ++ G+    + G
Sbjct: 283 GREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAG 342

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             + LI++Y K G +  AR +F+     + D    N+MI  Y QNG   EA   F ++  
Sbjct: 343 --AALINLYGKCGNMDKARSVFDV--LTELDVVAINSMIYAYAQNGFGHEALELFERLKN 398

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVI 564
             + PN VT  S+L ACN  G +E G Q+   SIR  + ++  +   T +ID+  +S  +
Sbjct: 399 MGLVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRL 457

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHG---MSERALS 600
             AA +  ++   + V + T++     HG   M+E+ +S
Sbjct: 458 EEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMS 496



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 211/478 (44%), Gaps = 60/478 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V WN++I   + +    EA+  Y  M         D YT+S++ KA 
Sbjct: 54  ARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLP--DAYTFSAISKAF 111

Query: 118 AETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           ++   +R G+  H    +        FV ++L++MY+      DA +             
Sbjct: 112 SQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHL------------- 158

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                VF  +  ++VV +  ++  Y +     EA++ F  M+  G++P+  +   +    
Sbjct: 159 -----VFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINC 213

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVAS--SAIFMYAELGCFDFARKIFDNCLERNT 294
            +LGD  +  +++GL+VK G E V    VAS  S + MY+     + + K+F+     N 
Sbjct: 214 GNLGDLVNGQLIHGLVVKSGLESV----VASQTSLLTMYSRCNMIEDSIKVFNQLDYANQ 269

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W + + G VQN     A+ +F +++    I  +  T  S L A S L  L++G+Q+HA
Sbjct: 270 VTWTSFVVGLVQNGREEVAVSIFREMIRC-SISPNPFTLSSILQACSSLAMLEVGEQIHA 328

Query: 355 YIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
             +K       +    +I              V + + E DVV+ N+MI A+ QNG   E
Sbjct: 329 ITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHE 388

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGI-----HFEGME 448
            L L   ++  G + + VT  ++L A +N    + G Q  A +   H I     HF  M 
Sbjct: 389 ALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCM- 447

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
              ID+  +S  ++ A  + E  +  + D   W  ++     +G +E A     ++LE
Sbjct: 448 ---IDLLGRSRRLEEAAMLIE--EVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE 500


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 221/760 (29%), Positives = 377/760 (49%), Gaps = 53/760 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F S+     V WN +I G+  +    EA+ L+ QM++       +  ++ S+L AC
Sbjct: 105 ANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREG--LKPNQNSFISILSAC 162

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+ +H H  +        V  +L+NMY  C S                   +
Sbjct: 163 QTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGS------------------LE 204

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  KVF+ MR RNVV+W  ++S YV+     EA   F+ ++R G +P+ +SF ++  A +
Sbjct: 205 LARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACT 264

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +  D +    ++  + + G E   ++ V ++ I MYA  G    AR++FDN    N   W
Sbjct: 265 NPNDLEQGLKLHAYIKQAGLE--QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSW 322

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY +     EA  LF + ++      D  T+ S L+  +   +L+ G++LH+ I+
Sbjct: 323 NAMIAGYGEGFME-EAFRLF-RDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIV 380

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           +      V V  A+I                    E++ VSWN  I+   ++G + E   
Sbjct: 381 RTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQ 440

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYA 456
           +  +M++   + D VT   LL++ ++  + + G+  H  + + G+    +  + LI MY 
Sbjct: 441 VFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYG 500

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +  AR++F +     RD  +WNAMIA Y Q+G    AF  F +        +  T 
Sbjct: 501 RCGKLADAREVFYRIRR--RDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTF 558

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            +VL A   + +++ G+++HG   +  L++++ + T+LI MYSK G +  A +VF  + E
Sbjct: 559 INVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQE 618

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V +  M+  Y      + AL LF+ M+  G+ PD+ T+ +VL+AC+  G ++ G + 
Sbjct: 619 KDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK- 677

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F    +E  ++  T HY C+   LGR   + EA EF++E+  E + L +W SLL +CR+H
Sbjct: 678 FHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDAL-MWESLLVACRIH 736

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
            +  LAE   + LL++  ++S P     L NIYA  G WE+V  ++  MRE GL     C
Sbjct: 737 HNVGLAETAVEHLLDVKAQSS-PAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSC 795

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + I+V    + F + +   PQ   + + +E L  +M + G
Sbjct: 796 T-IEVNSEFHTFMT-NHFSPQI-GVEDKIEELVWKMMDKG 832



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 195/668 (29%), Positives = 323/668 (48%), Gaps = 53/668 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+  L+ C + ++L  GK VH H       P  ++ N L++MYS C S  DA        
Sbjct: 54  YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDAN------- 106

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF +M  ++VV+WN ++S Y    R  EAV  F  M R G++P+  SF
Sbjct: 107 -----------NVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSF 155

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +++  A  +    +  + ++  + K G  Y +D+ V+++ I MY + G  + ARK+F+  
Sbjct: 156 ISILSACQTPIVLEFGEQIHSHITKAG--YESDVNVSTALINMYCKCGSLELARKVFNEM 213

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ERN   W  MI GYVQ+    EA  LF Q L       + V+F S L A +   +L+ G
Sbjct: 214 RERNVVSWTAMISGYVQHGDSKEAFVLF-QKLIRSGTQPNKVSFASILGACTNPNDLEQG 272

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE-----------RDV---------VSWNTMISAFVQN 389
            +LHAYI +  +   V+V NA+I            R V         VSWN MI+ + + 
Sbjct: 273 LKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE- 331

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G  +E   L  +MQ++GF  D  T  +LL+  ++  + + GK+ H+ ++R     +  + 
Sbjct: 332 GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVA 391

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI MYAK G ++ AR++F  N   +++  +WNA IA   ++G  +EAF  F+QM   +
Sbjct: 392 TALISMYAKCGSLEEARKVF--NQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDD 449

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V P+ VT  ++L +C    + E G+ +HG   ++ +  N  V  +LI MY + G +  A 
Sbjct: 450 VIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAR 509

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF +I  ++  ++  MI  Y QHG +  A  LF   K  G + D  TF+ VL A +   
Sbjct: 510 EVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLE 569

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            +D G +I  L+++   ++        +  M  + G + +AY   K + E+  V   W +
Sbjct: 570 DLDAGRKIHGLVEKA-GLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVV--CWNA 626

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLS--NIYAEEGNWENVDKVRKEMR 746
           +L +   + HS+  +   K   +M      P      S  N  A  G  E+  K   +++
Sbjct: 627 MLAA---YNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLK 683

Query: 747 ERGLRKEV 754
           E  +  + 
Sbjct: 684 EAAMETDT 691



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 253/509 (49%), Gaps = 49/509 (9%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   LAR++F+ +     V W  +I G+V +    EA +L+ ++ +S   T  +  +
Sbjct: 198 CKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSG--TQPNKVS 255

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++S+L AC    +L  G  +H +  +        V N+L++MY+ C S  +A        
Sbjct: 256 FASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANAR------- 308

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV-EAVRQFRMMLRMGIRPSTIS 228
                      +VFD +R  N V+WN +++ Y   E ++ EA R FR M + G +P   +
Sbjct: 309 -----------QVFDNLRSPNRVSWNAMIAGY--GEGFMEEAFRLFRDMQQKGFQPDRFT 355

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           + ++    +   D      ++  +V+   E   D+ VA++ I MYA+ G  + ARK+F+ 
Sbjct: 356 YASLLAICADRADLNRGKELHSQIVRTAWEA--DVTVATALISMYAKCGSLEEARKVFNQ 413

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             E+N   WN  I    ++    EA ++F Q +  D+++ D VTF++ L++ +  ++ + 
Sbjct: 414 MPEKNAVSWNAFIACCCRHGSEKEAFQVFKQ-MRRDDVIPDHVTFITLLNSCTSPEDFER 472

Query: 349 GQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           G+ +H  I +      N VA  +I              V   +  RD+ SWN MI+A+VQ
Sbjct: 473 GRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQ 532

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           +G +     L  + + +G   D  T   +L A +NL + D G++ H  + + G+  +  +
Sbjct: 533 HGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRI 592

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + LI MY+K G ++ A  +F+  +  ++D   WNAM+A Y  +   ++A   F+QM   
Sbjct: 593 LTTLIKMYSKCGSLRDAYSVFK--NVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLE 650

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLH 536
            V P+  T  SVL AC  +G IE GK+ H
Sbjct: 651 GVNPDSATYTSVLNACARLGAIEHGKKFH 679



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
           +TW+A  A   +N    ++     Q+L +  V  N+   A  L  C    ++  GK++H 
Sbjct: 17  STWDAS-AKVGRNTWKGKSIRGGVQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHD 75

Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
                  + ++++   LI MYSK G I  A NVF  + +K+ V++  MI GY  HG  + 
Sbjct: 76  HMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQE 135

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ---EYKIQPSTEHYC 654
           A+ LF  M+  G++P+  +F+++LSAC    +++ G QI   + +   E  +  ST    
Sbjct: 136 AVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVST---- 191

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
            + +M  + G +  A +   E+  E NV+  W +++     HG S+ A V+ +KL+   T
Sbjct: 192 ALINMYCKCGSLELARKVFNEM-RERNVVS-WTAMISGYVQHGDSKEAFVLFQKLIRSGT 249

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           + +   +  +L        + E   K+   +++ GL +EV
Sbjct: 250 QPNKVSFASILGAC-TNPNDLEQGLKLHAYIKQAGLEQEV 288


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 214/743 (28%), Positives = 368/743 (49%), Gaps = 68/743 (9%)

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           S D Y Y   L++C+  R+     AVH H +R   +PS F+ N+LL  Y  C     A  
Sbjct: 15  SLDAY-YLHHLRSCSAPRH---AAAVHAHIVRAHPSPSLFLRNTLLAAY--CRLGGHAR- 67

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGI 222
                            ++ D M R N V++N ++  Y +  +   ++  F R     G+
Sbjct: 68  -----------------RLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGV 110

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           R    ++     A S  G  +    V+ L V  G      +FV++S + MYA  G    A
Sbjct: 111 RADRFTYAAALAACSRAGRLREGKAVHALSVLEG--IAGGVFVSNSLVSMYARCGDMGQA 168

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++FD   ER+   WN ++ GYV+     + + +F  ++    I  +     S +   + 
Sbjct: 169 RQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFA-MMRRSGIGLNSFALGSVIKCCAG 227

Query: 343 LQE--LDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWN 380
             +  +D+   +H  ++K       F+A  ++              +  +V++ +VV +N
Sbjct: 228 SDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFN 287

Query: 381 TMISAFVQN----GLD--DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            MI+   ++    G D   E L L  E+Q +G      T ++++ A +   + + GKQ H
Sbjct: 288 AMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIH 347

Query: 435 AYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
             +L+H   F+G   + S LID+Y  SG ++   + F       +D  TW AMI+G  QN
Sbjct: 348 GQVLKHC--FQGDDFIGSALIDLYLNSGCMEDGFRCF--TSVPKQDVVTWTAMISGCVQN 403

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVG 551
            L E A   F ++L   + P+  TI+SV+ AC  +     G+Q+  F+ +    +   +G
Sbjct: 404 ELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMG 463

Query: 552 TSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE 611
            S I MY++SG ++ A   F ++   + V+++ +I  + QHG +  AL  F  M    + 
Sbjct: 464 NSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVV 523

Query: 612 PDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE 671
           P+ ITF+ VL+ACS+ GLVDEGL+ ++ M++EY + P+ +H  CV D+LGR G++ +A  
Sbjct: 524 PNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEA 583

Query: 672 FVKE-LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           F+++ +  +  V  IW SLL SCR+H   E  ++VA +++E+   +S    +V L NIY 
Sbjct: 584 FIRDSIFHDEPV--IWRSLLASCRIHRDMERGQLVADRIMELQPSSSAS--YVNLYNIYL 639

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
           + G      K+R  M+ERG++KE G SWI++   V+ F + D+ HP+S+ IY  L  +  
Sbjct: 640 DAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLS 699

Query: 791 EMRNAGNKTIQNSNVDATPRFDE 813
           ++         ++  D T R ++
Sbjct: 700 KIDKLTATDASSTKSDDTIRNEQ 722



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 262/537 (48%), Gaps = 58/537 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+L D + R   V +N +I  +     P  ++  +++ ++S+   + D +TY++ L AC
Sbjct: 66  ARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRA-DRFTYAAALAAC 124

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           +    LR GKAVH   +        FV NSL++MY+ C     A                
Sbjct: 125 SRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQAR--------------- 169

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VFD    R+ V+WN +VS YV+     + +R F MM R GI  ++ +  +V    +
Sbjct: 170 ---QVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCA 226

Query: 238 SLGD--YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
              D     A  V+G +VK G  + +D+F+AS+ + MYA+ G    A  +F + L+ N  
Sbjct: 227 GSDDPVMDIAAAVHGCVVKAG--FDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVV 284

Query: 296 VWNTMIGGYVQNNHPV------EAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELD 347
           V+N MI G  ++   V      EA+ L+  VQ   ++   F   TF S + A +   +++
Sbjct: 285 VFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEF---TFSSVIRACNLAGDIE 341

Query: 348 LGQQLHAYIIK------NFVALPVIVL--------------NAVIERDVVSWNTMISAFV 387
            G+Q+H  ++K      +F+   +I L               +V ++DVV+W  MIS  V
Sbjct: 342 FGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCV 401

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEG 446
           QN L +  L L +E+   G   D  T++++++A ++L     G+Q   +  + G   F  
Sbjct: 402 QNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTA 461

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           M +  I MYA+SG +  A + F++ +S   D  +W+A+I+ + Q+G   +A   F +M++
Sbjct: 462 MGNSCIHMYARSGDVHAAVRRFQEMES--HDIVSWSAVISSHAQHGCARDALRFFNEMVD 519

Query: 507 HNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
             V PN +T   VL AC+  G ++ G K        Y L   +   T ++D+  ++G
Sbjct: 520 AKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAG 576


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 198/537 (36%), Positives = 299/537 (55%), Gaps = 42/537 (7%)

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGC-FDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
           +VK G E   D  V +S + +Y +LG      R++FD    ++   W +M+ GYV +   
Sbjct: 86  VVKSGLE--TDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEH 143

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-----NFVALPV 365
           V+A+E+FV+++    +  +  T  SA+ A  +L E+ LG+  H  +I      N V    
Sbjct: 144 VKALEVFVEMVSFG-LQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISST 202

Query: 366 I---------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMI 409
           +               V + + E DV+ W  ++SAF +N L +E L L Y M + +G + 
Sbjct: 203 LAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP 262

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIF 468
           D  T   +L+A  NLR    GK+ H  L+ +GI    + ES L+DMY KSG ++ ARQ+F
Sbjct: 263 DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVF 322

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
             N    ++  +W+A++ GY QNG  E+A   FR+M E     ++    +VL AC  +  
Sbjct: 323 --NGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEE----KDLYCFGTVLKACAGLAA 376

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           + LGK++HG  +R     NV V ++LID+Y KSG I+YA+ V++K+  +N +T+  M+  
Sbjct: 377 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSA 436

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
             Q+G  E A+S F  M   GI+PD I+F+AVL+AC + GLV+EG   F LM + Y I+P
Sbjct: 437 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKP 496

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH-SELAEVVAK 707
            TEHY C+ D+LGR G   EA E + +  E  N   +WG LLG C  +   S +AE +AK
Sbjct: 497 GTEHYSCMIDLLGRAGLFEEA-ENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAK 555

Query: 708 KLLEMDTRNSMPGYH---VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           +++E++     P YH   VLLSN+Y   G   +  K+RK M  RG+ K VG SWID 
Sbjct: 556 RMMELE-----PKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKTVGQSWIDA 607



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 241/511 (47%), Gaps = 47/511 (9%)

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
           S   S  +  Y+S+L+ C +  +   G   H H ++      R V NSLL++Y      L
Sbjct: 53  SSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYF----KL 108

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
             +M   +             +VFD M  ++ ++W +++S YV ++ +V+A+  F  M+ 
Sbjct: 109 GPDMRETR-------------RVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVS 155

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
            G++P+  +  +   A   LG+ +     +G+++  G E+  +  ++S+  +MY      
Sbjct: 156 FGLQPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEW--NHVISSTLAYMYGVNKEP 213

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
             AR++FD   E +   W  ++  + +N+   EA+ LF  +     +V D  TF + L+A
Sbjct: 214 VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 273

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSW 379
              L+ L  G+++H  +I N +   V+                    V N +  +++VSW
Sbjct: 274 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSW 333

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           + ++  + QNG  ++ + +  EM+++    D      +L A + L    +GK+ H   +R
Sbjct: 334 SALLGGYCQNGEHEKAIEMFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVR 389

Query: 440 HGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G     + ES LID+Y KSG I  A +++ K     R+  TWNAM++   QNG  EEA 
Sbjct: 390 RGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSV--RNMITWNAMLSALAQNGRGEEAV 447

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDM 557
             F  M++  + P+ ++  +VL AC   G +E G+       + Y +       + +ID+
Sbjct: 448 SFFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDL 507

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
             ++G+   A N+  +   +N  +   ++LG
Sbjct: 508 LGRAGLFEEAENLLDRAECRNDASLWGVLLG 538



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 215/452 (47%), Gaps = 53/452 (11%)

Query: 59  RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
           R++FD +     + W +++ G+V +    +A+ ++ +M   S     + +T SS +KAC 
Sbjct: 116 RRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEM--VSFGLQPNKFTLSSAVKACF 173

Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
           E   +R+G+  H   I        F +N +       +SS  A M G+    VD      
Sbjct: 174 ELGEVRLGRCFHGVVI-----THGFEWNHV-------ISSTLAYMYGVNKEPVDAR---- 217

Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALS 237
             +VFD M   +V+ W  ++S + K + Y EA+  F  M R  G+ P   +F  V  A  
Sbjct: 218 --RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 275

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   K    ++G L+  G    +++ V SS + MY + G    AR++F+    +N   W
Sbjct: 276 NLRRLKQGKEIHGKLITNG--IGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSW 333

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           + ++GGY QN    +AIE+F ++ E D   F  V     L A + L  + LG+++H   +
Sbjct: 334 SALLGGYCQNGEHEKAIEMFREMEEKDLYCFGTV-----LKACAGLAAVRLGKEIHGQYV 388

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           +      VIV +A+I+                    R++++WN M+SA  QNG  +E + 
Sbjct: 389 RRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVS 448

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDM 454
              +M K+G   D ++  A+L+A  +    + G+   A + + +GI   G E Y  +ID+
Sbjct: 449 FFNDMVKKGIKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIK-PGTEHYSCMIDL 507

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             ++GL + A  + ++ +  + D + W  ++ 
Sbjct: 508 LGRAGLFEEAENLLDRAECRN-DASLWGVLLG 538



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 26/310 (8%)

Query: 55  PHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           P  AR++FD +  P  + W  ++  F  N+L  EA+ L+  M +       D  T+ +VL
Sbjct: 213 PVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP-DGSTFGTVL 271

Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
            AC   R L+ GK +H   I      +  V +SLL+MY    S  +A             
Sbjct: 272 TACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREAR------------ 319

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 +VF+ M R+N+V+W+ ++  Y +   + +A+  FR M    +      F  V  
Sbjct: 320 ------QVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEKDL----YCFGTVLK 369

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A + L   +    ++G  V+ G     ++ V S+ I +Y + GC D+A +++     RN 
Sbjct: 370 ACAGLAAVRLGKEIHGQYVRRGC--FGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNM 427

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN M+    QN    EA+  F  +++   I  D ++F++ L+A      ++ G+   A
Sbjct: 428 ITWNAMLSALAQNGRGEEAVSFFNDMVK-KGIKPDYISFIAVLTACGHTGLVEEGRNYFA 486

Query: 355 YIIKNFVALP 364
            + K++   P
Sbjct: 487 LMAKSYGIKP 496



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 45/285 (15%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           + G    ARQ+F+ + R   V W+ ++ G+  N    +AI ++ +M++       D Y +
Sbjct: 311 KSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEK------DLYCF 364

Query: 111 SSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMY--STCLSSLDAEMVGL 166
            +VLKACA    +R+GK +H  ++R  CF N    V ++L+++Y  S C           
Sbjct: 365 GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNV--IVESALIDLYGKSGC----------- 411

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               +DY+      +V+  M  RN++ WN ++S   +  R  EAV  F  M++ GI+P  
Sbjct: 412 ----IDYAS-----RVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 462

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLL-----VKLGSEYVNDLFVASSAIFMYAELGCFDF 281
           ISF+ V  A    G  +     + L+     +K G+E+       S  I +    G F+ 
Sbjct: 463 ISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHY------SCMIDLLGRAGLFEE 516

Query: 282 ARKIFDNCLERN-TEVWNTMIGGYVQNNHPVEAIELFVQ-VLELD 324
           A  + D    RN   +W  ++G    N       E   + ++EL+
Sbjct: 517 AENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAKRMMELE 561


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 339/630 (53%), Gaps = 37/630 (5%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD M + +   WN ++  +     Y EA++ +  M+  G++  + ++  V  +++ + 
Sbjct: 81  QLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTGIS 140

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    ++ +++KL   +V+D++V +S I +Y +LGC   A K+F+   ER+   WN+M
Sbjct: 141 SLEEGKKIHAMVIKL--RFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSM 198

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GY+       ++ LF ++L+      D  + +SAL A S +   ++G++LH + +++ 
Sbjct: 199 ISGYLALEDGFRSLMLFKEMLKFG-FKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSR 257

Query: 361 VALPVI---------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
           +    +                     +   +I+R++V+WN +I  + +N    +  +  
Sbjct: 258 IETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCF 317

Query: 400 YEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYA 456
            +M +Q G   D +T+  LL A + L     G+  H Y +R G   H   +++ LIDMY 
Sbjct: 318 QKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIV-LDTALIDMYG 372

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +K+A  IF++    +++  +WN++IA Y QNG    A   F+++ + ++ P+  TI
Sbjct: 373 EWGQLKSAEVIFDR--IAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTI 430

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           AS+LPA     ++  G+Q+H + ++     N  +  SL+ MY+  G +  A   F  +  
Sbjct: 431 ASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLL 490

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V++ ++I+ Y  HG    ++ LF  M    ++P+  TF ++L+ACS +G+VDEG + 
Sbjct: 491 KDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEY 550

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F+ M++EY I P  EHY  + D++GR G    A  F++E+        IWGSLL + R H
Sbjct: 551 FESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTA-RIWGSLLNASRNH 609

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
               +AE  A+++ +M+  N+  G +VLL N+YAE   WE+V++++  M  +G+ +    
Sbjct: 610 NDITVAEFAAEQIFKMEHDNT--GCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSR 667

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
           S ++     +   + D+ H +++KIYE+L+
Sbjct: 668 STVEAKSKTHVLTNGDRSHVETNKIYEVLD 697



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 271/565 (47%), Gaps = 53/565 (9%)

Query: 35  PKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
            +L  P +   L      G    A QLFD + +  T +WN +I GF    L +EA+ LY 
Sbjct: 56  KQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYC 115

Query: 95  QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
           +M  S      D++TY  V+K+     +L  GK +H   I+       +V NSL+++Y  
Sbjct: 116 RMVFSG--VKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMK 173

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
              S DAE                  KVF+ M  R++V+WN+++S Y+  E    ++  F
Sbjct: 174 LGCSWDAE------------------KVFEEMPERDIVSWNSMISGYLALEDGFRSLMLF 215

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           + ML+ G +P   S ++   A S +        ++   V+   E   D+ V +S + MY+
Sbjct: 216 KEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIE-TGDVMVMTSILDMYS 274

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G   +A +IF   ++RN   WN +IG Y +N+   +A   F ++ E + +  D +T +
Sbjct: 275 KYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLI 334

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------E 373
           + L A + L+    G+ +H Y ++    LP IVL+  +                     E
Sbjct: 335 NLLPACAILE----GRTIHGYAMRRGF-LPHIVLDTALIDMYGEWGQLKSAEVIFDRIAE 389

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           ++++SWN++I+A+VQNG +   L L  ++     + DS T+ ++L A +   +   G+Q 
Sbjct: 390 KNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQI 449

Query: 434 HAYLL--RHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
           HAY++  R+G +   + S L+ MYA  G ++ AR+ F  N    +D  +WN++I  Y  +
Sbjct: 450 HAYIVKSRYGSNTIILNS-LVHMYAMCGDLEDARKCF--NHVLLKDVVSWNSIIMAYAVH 506

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFV 550
           G    +   F +M+   V PN  T AS+L AC+  G ++ G +        Y +D  +  
Sbjct: 507 GFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 566

Query: 551 GTSLIDMYSKSGVINYAANVFAKIP 575
              ++D+  ++G  + A     ++P
Sbjct: 567 YGYMLDLIGRTGNFSSAKRFIREMP 591


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 188/556 (33%), Positives = 299/556 (53%), Gaps = 60/556 (10%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WNTM  G+  ++ PV A+ L+V ++ L  ++ +  TF   L + 
Sbjct: 40  YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LLPNCYTFPFLLKSC 98

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------- 373
           ++ +    GQQ+H +++K    L + V  ++I                            
Sbjct: 99  AKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYT 158

Query: 374 ------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                   +DVVSWN MIS + + G + E L L  EM K     
Sbjct: 159 ALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRP 218

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T+ +++SA +   + ++G+Q H+++  HG      + + LID+Y K G ++TA  +F
Sbjct: 219 DESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLF 278

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E      +D  +WN +I GYT   L +EA + F++ML    +PN VT+ S+LPAC  +G 
Sbjct: 279 EGLSY--KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336

Query: 529 IELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           IE+G+ +H +  + L  +       TSLIDMY+K G I  A  VF  I  ++  ++  MI
Sbjct: 337 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 396

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            G+  HG +  A  +F  M+   IEPD ITFV +LSACS++G++D G  IF  M+++YKI
Sbjct: 397 FGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKI 456

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ EL E  A
Sbjct: 457 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMHGNVELGESYA 515

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           + L++++ +N  PG +VLLSNIYA  G W  V K+R  + ++G++K  GCS I++   V+
Sbjct: 516 QNLIKIEPKN--PGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 573

Query: 767 RFASKDQEHPQSHKIY 782
            F   D+ HP++ +IY
Sbjct: 574 EFIIGDKFHPRNREIY 589



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 259/559 (46%), Gaps = 106/559 (18%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+T++  N++ WNT+   +  +   V A+  +  M+ +G+ P+  +F  +  + +    
Sbjct: 44  VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT------- 294
           ++    ++G ++KLG  Y  DL+V +S I MY + G  + ARK+FD    R+        
Sbjct: 104 FREGQQIHGHVLKLG--YDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALI 161

Query: 295 -----------------EV-------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
                            E+       WN MI GY +  +  EA+ELF ++++ + +  D+
Sbjct: 162 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDE 220

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------- 373
            T +S +SA +Q   ++LG+Q+H++I  +     + ++NA+I+                 
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              +DV+SWNT+I  +    L  E L+L  EM + G   + VT+ ++L A ++L   ++G
Sbjct: 281 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIG 340

Query: 431 KQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +  H Y+   L+   +     + LIDMYAK G I+ A+Q+F+     +R  ++WNAMI G
Sbjct: 341 RWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD--SILNRSLSSWNAMIFG 398

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           +  +G    AF  F +M ++ + P+ +T   +L AC+  G ++LG+              
Sbjct: 399 FAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH------------- 445

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTTMILGYGQHGMSERALSLF 602
                                 +F  + E   +T     Y  MI   G  G+ + A  + 
Sbjct: 446 ----------------------IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI 483

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE-HYCCVADMLG 661
            +M+   +EPD + + ++L AC   G V+ G       Q   KI+P     Y  ++++  
Sbjct: 484 NTME---MEPDGVIWCSLLKACKMHGNVELGES---YAQNLIKIEPKNPGSYVLLSNIYA 537

Query: 662 RVGKVVEAYEFVKELGEEG 680
             G+  E  +    L ++G
Sbjct: 538 TAGRWNEVAKIRALLNDKG 556



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 248/563 (44%), Gaps = 80/563 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWNT+  G   ++ P  A+ LY  M       +C  YT+ 
Sbjct: 36  DGLPY-AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNC--YTFP 92

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++  R G+ +H H ++   +   +V+ SL++MY       DA  V  +    
Sbjct: 93  FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 152

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              K+FD +  ++VV+WN ++S Y +T    EA+  F+ M+
Sbjct: 153 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 212

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   + V+V  A +     +    V+  +   G  + ++L + ++ I +Y + G 
Sbjct: 213 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG--FGSNLKIVNALIDLYIKCGE 270

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 271 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTMLSILP 329

Query: 339 AVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIERDV 376
           A + L  +++G+ +H YI K                        +     V ++++ R +
Sbjct: 330 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SWN MI  F  +G  +    +   M+K     D +T   LLSA S+    D+G+     
Sbjct: 390 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 449

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +         +E Y  +ID+   SGL K A ++              N M          
Sbjct: 450 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI-------------NTM---------- 486

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
                         + P+ V   S+L AC   GN+ELG+      I+ +  +N      L
Sbjct: 487 -------------EMEPDGVIWCSLLKACKMHGNVELGESYAQNLIK-IEPKNPGSYVLL 532

Query: 555 IDMYSKSGVINYAANVFAKIPEK 577
            ++Y+ +G  N  A + A + +K
Sbjct: 533 SNIYATAGRWNEVAKIRALLNDK 555


>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 194/576 (33%), Positives = 318/576 (55%), Gaps = 23/576 (3%)

Query: 236 LSSLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           LSS  D KS      ++G ++ LG E  + + V     F Y+       A  I +N    
Sbjct: 107 LSSCTDVKSLAEGRQLHGHIISLGFEQ-HPILVPKLVTF-YSAFNLLVDAHVITENSNIL 164

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I  YV+N    +A+  + Q+++   I  D+ T+ S L A  +  +L  G+++
Sbjct: 165 HPFPWNLLISSYVRNGFCQKALSAYKQMVK-KGIRPDNFTYPSVLKACGEELDLGFGKEV 223

Query: 353 HAYIIKNFVALPVIVLNAV----------IERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
           H  I  +  A   +   A           IE +++ WNT+   +++ G     L L+ +M
Sbjct: 224 HESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQM 283

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLI 461
           +K G  +DSV +   L A S++ +  +GK+ H++ +R      + +++ LI MY++   +
Sbjct: 284 RKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDL 343

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           K A  +F+  ++  +   TWN++I+G       EEA    R+ML   + PN VTIASVLP
Sbjct: 344 KHAYLLFQLMEA--KSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLP 401

Query: 522 ACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            C  + N++ GK+ H +  R      ++ +  +L+DMY++SG +  A  VF  + E++ +
Sbjct: 402 LCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKM 461

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           TYT+MI GYG  G  + AL LF  M    I+PD IT +AVLSACS++GLV +G  +F+ M
Sbjct: 462 TYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKM 521

Query: 641 QQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
           +  Y + P  EH+ C+ D+ GR G + +A E ++ +  +     +W +L+G+CR+H ++E
Sbjct: 522 RSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTP-AMWATLIGACRIHRNTE 580

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           + E  A+KLLEM   N  PGY+VL++N+YA  G W  + KVR  MR+ G+RK  GC+W+D
Sbjct: 581 IGEWAAEKLLEMKPEN--PGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVD 638

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           VG   + F   D  +  + +IY +LE L M M+ AG
Sbjct: 639 VGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAG 674



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/508 (23%), Positives = 234/508 (46%), Gaps = 70/508 (13%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           SS+L +C + ++L  G+ +H H I         +   L+  YS                 
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSA---------------- 147

Query: 171 VDYSKYDLVCKVFDTMRRRNVV---AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                ++L+          N++    WN ++S YV+     +A+  ++ M++ GIRP   
Sbjct: 148 -----FNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNF 202

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           ++ +V  A       +  D+ +G       + V++   AS    +YA +G ++ A ++F 
Sbjct: 203 TYPSVLKACG-----EELDLGFG-------KEVHESINAS----LYASMGMWNEAFELFG 246

Query: 288 NC----LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +     +E N  +WNT+ GGY++  +   A+EL  Q+ +    + D V  +  L A S +
Sbjct: 247 SMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHL-DSVALIIGLGACSHI 305

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMI 383
            +  LG+++H++ I++       V NA+I                     + +++WN++I
Sbjct: 306 GDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSII 365

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S        +E   L+ EM   G   + VT+ ++L   + + N   GK+ H Y+ R    
Sbjct: 366 SGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDF 425

Query: 444 FEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            + +  +  L+DMYA+SG +  AR++F+    G+RD+ T+ +MIAGY   G  + A   F
Sbjct: 426 KDHLLLWNALVDMYARSGKVLEARRVFDM--LGERDKMTYTSMIAGYGMQGEGQAALKLF 483

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSK 560
            +M    + P+ +T+ +VL AC+  G +  G+ L       Y L  ++     + D++ +
Sbjct: 484 EEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 543

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILG 588
           +G++N A  +   +P K +      ++G
Sbjct: 544 AGLLNKAKEIIRNMPYKPTPAMWATLIG 571



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 183/450 (40%), Gaps = 81/450 (18%)

Query: 73  WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
           WN +I  +V N    +A+  Y QM K       DN+TY SVLKAC E  +L  GK VH  
Sbjct: 169 WNLLISSYVRNGFCQKALSAYKQMVKKG--IRPDNFTYPSVLKACGEELDLGFGKEVHES 226

Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
                 N S +    + N       S+ AE + L                       N++
Sbjct: 227 I-----NASLYASMGMWNEAFELFGSMWAEDIEL-----------------------NII 258

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
            WNTI   Y++T  Y  A+     M + G    +++ +    A S +GD K    ++   
Sbjct: 259 IWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFA 318

Query: 253 VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
           ++     V+   V ++ I MY+       A  +F     ++   WN++I G    +   E
Sbjct: 319 IRSCFGEVDT--VKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEE 376

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--NFVALPVIVLNA 370
           A  L  ++L L  I  + VT  S L   +++  L  G++ H Y+ +  +F    +++ NA
Sbjct: 377 ASFLLREML-LFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKD-HLLLWNA 434

Query: 371 VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           ++                    ERD +++ +MI+ +   G     L L  EM       D
Sbjct: 435 LVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPD 494

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESY------------LIDMYAK 457
            +T+ A+LSA S           H+ L+  G + FE M S             + D++ +
Sbjct: 495 HITMIAVLSACS-----------HSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 543

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +GL+  A++I  +N       A W  +I  
Sbjct: 544 AGLLNKAKEII-RNMPYKPTPAMWATLIGA 572



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 168/390 (43%), Gaps = 37/390 (9%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           +IWNTI  G++       A+ L SQM+K   +   D+      L AC+   + ++GK +H
Sbjct: 258 IIWNTIAGGYLRTGNYKGALELLSQMRKCGSHL--DSVALIIGLGACSHIGDAKLGKEIH 315

Query: 131 CHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRR 189
              IR CF      V N+L+ MYS C          LK+  +          +F  M  +
Sbjct: 316 SFAIRSCFGEVDT-VKNALITMYSRCKD--------LKHAYL----------LFQLMEAK 356

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           +++ WN+I+S     +R  EA    R ML  GI P+ ++  +V P  + + + +     +
Sbjct: 357 SLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFH 416

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
             + +   ++ + L + ++ + MYA  G    AR++FD   ER+   + +MI GY     
Sbjct: 417 CYMTRR-EDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGE 475

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              A++LF ++    +I  D +T ++ LSA S    +  GQ L   +   +   P     
Sbjct: 476 GQAALKLFEEMNNF-QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTP----- 529

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
                 +  +  M   F + GL ++   ++  M    +         L+ A    RN ++
Sbjct: 530 -----HLEHFACMTDLFGRAGLLNKAKEIIRNMP---YKPTPAMWATLIGACRIHRNTEI 581

Query: 430 GKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           G+     LL       G    + +MYA +G
Sbjct: 582 GEWAAEKLLEMKPENPGYYVLIANMYAAAG 611



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 28/304 (9%)

Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEK 470
           +++LLS+ +++++   G+Q H +++  G  FE    +   L+  Y+   L+  A  I E 
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLG--FEQHPILVPKLVTFYSAFNLLVDAHVITE- 159

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
            +S       WN +I+ Y +NG  ++A  A++QM++  + P+  T  SVL AC    ++ 
Sbjct: 160 -NSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 218

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF----AKIPEKNSVTYTTMI 586
            GK++H  SI                +Y+  G+ N A  +F    A+  E N + + T+ 
Sbjct: 219 FGKEVHE-SIN-------------ASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIA 264

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            GY + G  + AL L   M+ CG   D++  +  L ACS+ G    G +I     +    
Sbjct: 265 GGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFG 324

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
           +  T     +  M  R   +  AY   + +  E   L  W S++  C     SE A  + 
Sbjct: 325 EVDTVKNALIT-MYSRCKDLKHAYLLFQLM--EAKSLITWNSIISGCCHMDRSEEASFLL 381

Query: 707 KKLL 710
           +++L
Sbjct: 382 REML 385



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 42/283 (14%)

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF--VAFRQMLEHNVTPNV 513
           A    +++A++ F   D+   D       +  +T  G L +AF  V+  ++   + + ++
Sbjct: 41  ASCNALESAQETFTSVDASMIDSLL--TSLKEFTSRGNLLDAFKTVSLIRLHASSASQDL 98

Query: 514 VT--IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS------KSGVIN 565
           +   I+S+L +C  + ++  G+QLHG  I    +Q+  +   L+  YS       + VI 
Sbjct: 99  IVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVIT 158

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
             +N+    P      +  +I  Y ++G  ++ALS ++ M   GI PD  T+ +VL AC 
Sbjct: 159 ENSNILHPFP------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACG 212

Query: 626 -------------------YA--GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
                              YA  G+ +E  ++F  M  E  I+ +   +  +A    R G
Sbjct: 213 EELDLGFGKEVHESINASLYASMGMWNEAFELFGSMWAE-DIELNIIIWNTIAGGYLRTG 271

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSL--LGSCRLHGHSELAEVV 705
               A E + ++ + G+ L+    +  LG+C   G ++L + +
Sbjct: 272 NYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEI 314



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 27/250 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNY-TYSSVLKA 116
           A  LF  +   + + WN+II G    +   EA  L  +M     +    NY T +SVL  
Sbjct: 346 AYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLL---FGIEPNYVTIASVLPL 402

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           CA   NL+ GK  HC+  R         ++N+L++MY+     L+A              
Sbjct: 403 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEAR------------- 449

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                +VFD +  R+ + + ++++ Y        A++ F  M    I+P  I+ + V  A
Sbjct: 450 -----RVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSA 504

Query: 236 LSSLGDYKSADVVYGLLVKL-GSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
            S  G      +++  +  L G     + F   + +F  A  G  + A++I  N   + T
Sbjct: 505 CSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRA--GLLNKAKEIIRNMPYKPT 562

Query: 295 -EVWNTMIGG 303
             +W T+IG 
Sbjct: 563 PAMWATLIGA 572


>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 204/618 (33%), Positives = 310/618 (50%), Gaps = 99/618 (16%)

Query: 192 VAWNTIVSWYVKTERYVEAVRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
           V+WN+IVS Y       +AV  FR M +  GI P T+  VN+ P    LG          
Sbjct: 24  VSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLG---------- 73

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
                        FV ++ + MYA+ G  + A K+F+    ++   WN M+ GY QN   
Sbjct: 74  ------------FFVGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQNGRF 121

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
            +A+ LF ++ E                                                
Sbjct: 122 EDALSLFGKMRE-----------------------------------------------E 134

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
            IE DVV+W+++IS + Q G   E + +  +M       + VT+ +LLSA +++     G
Sbjct: 135 KIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHG 194

Query: 431 KQTHAYLLR---HGIHFEGMESY-----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           K+TH Y ++    G H +  +       LIDMYAK   ++ AR +F++    DRD  TW 
Sbjct: 195 KETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 254

Query: 483 AMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
            MI GY Q+G    A   F +M  +++ + PN  TI+ VL AC  +  ++ GKQ+H + +
Sbjct: 255 VMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVL 314

Query: 541 RY-LLDQNV-FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
           R   +D +V FV   LIDMYSKSG ++ A  VF  + ++N+V++T+++ GYG HG    A
Sbjct: 315 RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGA---A 371

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L L           D ITF+ VL ACS++G+VD G+ +F  M +++ + P  EHY C+AD
Sbjct: 372 LVL-----------DGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMAD 420

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           + GR G++ EA   + ++  E   + +W +LL +CR H + ELAE  AKKLLE+   N  
Sbjct: 421 LFGRAGRLCEATRLINDMSMEPTPV-VWIALLSACRTHSNEELAEFAAKKLLELKADND- 478

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            G + LLSNIYA    W++V ++R  M+  G++K  G SW+     +  F   D+ H QS
Sbjct: 479 -GTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQS 537

Query: 779 HKIYEMLERLAMEMRNAG 796
            KIYE L  L   ++  G
Sbjct: 538 QKIYETLADLIKRIKAIG 555



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 186/432 (43%), Gaps = 102/432 (23%)

Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
           FV N+L++MY+ C    DA                   KVF+ MR ++VV WN +V+ Y 
Sbjct: 75  FVGNALVDMYAKCGKMEDAS------------------KVFERMRFKDVVTWNAMVTGYS 116

Query: 203 KTERY-----------------------------------VEAVRQFRMMLRMGIRPSTI 227
           +  R+                                    EA+  FR M     RP+ +
Sbjct: 117 QNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVV 176

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVK--LGSEY---VNDLFVASSAIFMYAELGCFDFA 282
           + +++  A +S+G        +   VK  L  E+    +DL V ++ I MYA+    + A
Sbjct: 177 TLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 236

Query: 283 RKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELDE-IVFDDVTFLSALSA 339
           R +FD    ++ +V  W  MIGGY Q+     A++LF ++ ++D  IV +D T    L A
Sbjct: 237 RAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMA 296

Query: 340 VSQLQELDLGQQLHAYIIKN--------FVALPVI--------------VLNAVIERDVV 377
            ++L  L  G+Q+HAY+++         FVA  +I              V +++ +R+ V
Sbjct: 297 CARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAV 356

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           SW ++++               Y M     ++D +T   +L A S+    D G      +
Sbjct: 357 SWTSLLTG--------------YGMHGAALVLDGITFLVVLYACSHSGMVDRGIDLFYRM 402

Query: 438 LRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKND-SGDRDQATWNAMIAGYTQNGLL 494
            +  +   G+E Y  + D++ ++G +  A ++   ND S +     W A+++    +   
Sbjct: 403 SKDFVVDPGVEHYACMADLFGRAGRLCEATRLI--NDMSMEPTPVVWIALLSACRTHSNE 460

Query: 495 EEAFVAFRQMLE 506
           E A  A +++LE
Sbjct: 461 ELAEFAAKKLLE 472



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 183/448 (40%), Gaps = 64/448 (14%)

Query: 51  QEGRPHLARQLFDSITRPT----TVIWNTIIIGFVCNNLPYEAILLYSQMK--KSSPYTS 104
           Q GR   A  LF  +         V W+++I G+       EA+ ++ QM   +  P   
Sbjct: 117 QNGRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRP--- 173

Query: 105 CDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF-------SNPSRFVYNSLLNMYSTCLS 157
            +  T  S+L ACA    L  GK  HC+ ++               V N+L++MY+ C  
Sbjct: 174 -NVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC-- 230

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                    K +EV  + +D +C      + R+VV W  ++  Y +      A++ F  M
Sbjct: 231 ---------KSLEVARAMFDEICP-----KDRDVVTWTVMIGGYAQHGDANHALQLFSEM 276

Query: 218 LRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
            ++   I P+  +   V  A + L   K    ++  +++      + LFVA+  I MY++
Sbjct: 277 FKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSK 336

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
            G  D A+ +FD+  +RN   W +++ GY  +                  +V D +TFL 
Sbjct: 337 SGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAA---------------LVLDGITFLV 381

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            L A S    +D G  L   + K+FV  P           V  +  M   F + G   E 
Sbjct: 382 VLYACSHSGMVDRGIDLFYRMSKDFVVDP----------GVEHYACMADLFGRAGRLCEA 431

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
             L+ +M  +      V   ALLSA     N+++ +     LL      +G  + L ++Y
Sbjct: 432 TRLINDMSMEP---TPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNIY 488

Query: 456 AKSGLIK-TARQIFEKNDSGDRDQATWN 482
           A +   K  AR  +    +G + +  W+
Sbjct: 489 ANARRWKDVARIRYLMKRTGIKKRPGWS 516


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/529 (33%), Positives = 296/529 (55%), Gaps = 29/529 (5%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           ARK+FD    R+   WN+MI  +V      EAIEL+  +L  + ++ D  TF +   A S
Sbjct: 54  ARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNML-FEGVLPDAYTFSAIFKAFS 112

Query: 342 QLQELDLGQQLHAYII-------KNFVALPVI--------------VLNAVIERDVVSWN 380
           ++     GQ+ H   +         FVA  ++              V + V+++DVV + 
Sbjct: 113 EMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFT 172

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            +I  + Q+GLD E L +  +M       +  T+ ++L +  NL +   GK  H  ++++
Sbjct: 173 ALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKY 232

Query: 441 GIH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
           G+      ++ L+ MY+K  +++ + ++F  N        TW + I G  QNG  E A  
Sbjct: 233 GLESVVASQTSLLTMYSKCNMVEDSIKVF--NSLAYASHVTWTSFIVGLVQNGREEVALS 290

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            FR+M+  +++PN  T++S+L AC+ +  +E G+Q+H  +++  +D N FV  +LI +Y 
Sbjct: 291 MFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYG 350

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G +  A +VF  + E + V+  TMI  Y Q+G    AL LF  +K  G+EP+ +TF++
Sbjct: 351 KCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFIS 410

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +L AC+ AGLV+EG QIF L++  + I+ + +HY C+ D+LGR  +  EA   ++E G+ 
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE-GKN 469

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            +V++ W +LL +C++HG  E+AE   KK+L+   R+   G H+LL+NIYA  G W+NV 
Sbjct: 470 PDVIQ-WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG--GTHILLTNIYASAGKWDNVI 526

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           +++   R+  L+K    SW+D+   V+ F + D  HP++H+I EML  L
Sbjct: 527 EMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHEL 575



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 244/522 (46%), Gaps = 53/522 (10%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+S++  C   ++L   K++H H ++  S  S F  + L++ Y  C    +A        
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS-FFGHKLIDGYIKCSVITEAR------- 55

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      K+FD M  R++V WN+++S +V   +  EA+  +  ML  G+ P   +F
Sbjct: 56  -----------KLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTF 104

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +F A S +G  +     +GL V LG E V+D FVA+  + MYA+ G    AR +FD  
Sbjct: 105 SAIFKAFSEMGVSREGQKAHGLAVVLGFE-VSDGFVATGIVDMYAKFGKMKDARFVFDRV 163

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           L+++  ++  +I GY Q+    EA+E+F  ++    I  ++ T  S L +   L +L  G
Sbjct: 164 LDKDVVLFTALIVGYNQHGLDGEALEVFEDMVG-SRIKPNEYTLASVLVSCGNLGDLVNG 222

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
           + +H  ++K                    N V   + V N++     V+W + I   VQN
Sbjct: 223 KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
           G ++  L +  EM +     +  T++++L A S+L   + G+Q HA  ++ G+     ++
Sbjct: 283 GREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVD 342

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI +Y K G ++ AR +F+     + D  + N MI  Y QNG   EA   F ++ +  
Sbjct: 343 AALIHLYGKCGNVEKARSVFD--SLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLG 400

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGF-----SIRYLLDQNVFVGTSLIDMYSKSGV 563
           + PNVVT  S+L ACN  G +E G Q+        SI    D      T +ID+  ++  
Sbjct: 401 LEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY----TCMIDLLGRAKR 456

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
              A  +  +    + + + T++     HG  E A    + M
Sbjct: 457 FEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 230/534 (43%), Gaps = 96/534 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V WN++I   V      EAI LYS M         D YT+S++ KA 
Sbjct: 54  ARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLP--DAYTFSAIFKAF 111

Query: 118 AETRNLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           +E    R G+  H    +  F     FV   +++MY+      DA               
Sbjct: 112 SEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARF------------- 158

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                VFD +  ++VV +  ++  Y +     EA+  F  M+   I+P+  +  +V  + 
Sbjct: 159 -----VFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSC 213

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVAS--SAIFMYAELGCFDFARKIFDNCLERNT 294
            +LGD  +  +++GL+VK G E V    VAS  S + MY++    + + K+F++    + 
Sbjct: 214 GNLGDLVNGKLIHGLVVKYGLESV----VASQTSLLTMYSKCNMVEDSIKVFNSLAYASH 269

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W + I G VQN     A+ +F +++    I  +  T  S L A S L  L+ G+Q+HA
Sbjct: 270 VTWTSFIVGLVQNGREEVALSMFREMMRCS-ISPNHFTLSSILHACSSLAMLEAGEQIHA 328

Query: 355 YIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
             +K       FV   +I              V +++ E D+VS NTMI A+ QNG   E
Sbjct: 329 VTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHE 388

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
            L L   ++K G   + VT  ++L A +N                               
Sbjct: 389 ALELFERLKKLGLEPNVVTFISILLACNN------------------------------- 417

Query: 455 YAKSGLIKTARQIF---EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
              +GL++   QIF     N S +  +  +  MI    +    EEA      ++E    P
Sbjct: 418 ---AGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA----TMLIEEGKNP 470

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS---LIDMYSKSG 562
           +V+   ++L AC   G +E+ ++     ++ +LDQ    G +   L ++Y+ +G
Sbjct: 471 DVIQWRTLLNACKIHGEVEMAEKF----MKKMLDQAPRDGGTHILLTNIYASAG 520



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 183/407 (44%), Gaps = 37/407 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   AR +FD +     V++  +I+G+  + L  EA+ ++  M  S      + YT +S
Sbjct: 151 GKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSR--IKPNEYTLAS 208

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL +C    +L  GK +H   ++           SLL MYS C    D+           
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDS----------- 257

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   KVF+++   + V W + +   V+  R   A+  FR M+R  I P+  +  ++
Sbjct: 258 -------IKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSI 310

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A SSL   ++ + ++ + VKLG +   + FV ++ I +Y + G  + AR +FD+  E 
Sbjct: 311 LHACSSLAMLEAGEQIHAVTVKLGVD--GNKFVDAALIHLYGKCGNVEKARSVFDSLTEL 368

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +    NTMI  Y QN    EA+ELF ++ +L  +  + VTF+S L A +    ++ G Q+
Sbjct: 369 DIVSINTMIYAYAQNGFGHEALELFERLKKLG-LEPNVVTFISILLACNNAGLVEEGCQI 427

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
            + +I+N         N  IE     +  MI    +    +E  ML+ E +      D +
Sbjct: 428 FS-LIRN---------NHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNP----DVI 473

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
               LL+A       ++ ++    +L       G    L ++YA +G
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAG 520


>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 185/542 (34%), Positives = 290/542 (53%), Gaps = 58/542 (10%)

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
           S +V  + +++  + MY +      A+++FD   ER+   WN MI GY +     EA +L
Sbjct: 118 SGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKL 177

Query: 317 FVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDV 376
           F Q                                                   + ERD 
Sbjct: 178 FDQ---------------------------------------------------MTERDN 186

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            SW  M S +V++   +E L L   MQ+ + F  +  T+++ L+A++ +++  +GK+ H 
Sbjct: 187 FSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHG 246

Query: 436 YLLRHGIHFEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           ++LR G+  +G+  S L DMY K G I  AR IF+K  + DRD  +W AMI  Y + G  
Sbjct: 247 HILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDK--TVDRDVVSWTAMIDRYFKEGRR 304

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EE F  F  +L+  + PN  T + VL AC      ELGKQ+HG+  R   D + F  ++L
Sbjct: 305 EEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTL 364

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           + MY+K G I  A  VF  +P  + V++T++I GY Q+G  + AL  F  +   G +PD 
Sbjct: 365 VHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDH 424

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           ITFV VLSAC++AGLVD+GL+ FD +++++ +  + +HY C+ D+L R G++ EA + + 
Sbjct: 425 ITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIID 484

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
           ++  E +   +W SLLG CR+HG+ +LA+  A+ L E++  N  P  +  L+NIYA  G 
Sbjct: 485 KMPIEPDKF-LWASLLGGCRIHGNLKLAKRAAEALFEIEPEN--PATYTTLANIYATAGL 541

Query: 735 WENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           W  V +VRK M  RG+ K+ G SWI++   V+ F   D  H +S +I+E L +L+  M+ 
Sbjct: 542 WGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKE 601

Query: 795 AG 796
            G
Sbjct: 602 EG 603



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/496 (25%), Positives = 218/496 (43%), Gaps = 72/496 (14%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           TYS++L+ C + R L  G  VH H       P   + N +L+MY  C S ++A+ +  + 
Sbjct: 91  TYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEM 150

Query: 169 VEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            E D   ++++              K+FD M  R+  +W  + S YV+ +++ EA+  FR
Sbjct: 151 AERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFR 210

Query: 216 MMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
            M R    + +  +  +   A +++        ++G ++++G +   D  V S+   MY 
Sbjct: 211 AMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDL--DGVVWSALSDMYG 268

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G    AR IFD  ++R+   W  MI  Y +     E   LF  +L+   I  ++ TF 
Sbjct: 269 KCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLK-SGIWPNEFTFS 327

Query: 335 SALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIER 374
             L+A +     +LG+Q+H Y+ +      +F A  ++              V N +   
Sbjct: 328 GVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRP 387

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           D+VSW ++IS + QNG  DE L     + K G   D +T   +LSA            TH
Sbjct: 388 DLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSAC-----------TH 436

Query: 435 AYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           A L+  G+       Y   +  K GL  TA                +  +I   +++G L
Sbjct: 437 AGLVDKGL------EYFDSIKEKHGLTHTADH--------------YACLIDLLSRSGRL 476

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           +EA     +M    + P+    AS+L  C   GN++L K+    ++  +  +N    T+L
Sbjct: 477 QEAEDIIDKM---PIEPDKFLWASLLGGCRIHGNLKLAKRA-AEALFEIEPENPATYTTL 532

Query: 555 IDMYSKSGVINYAANV 570
            ++Y+ +G+    A V
Sbjct: 533 ANIYATAGLWGGVAEV 548



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 144/304 (47%), Gaps = 22/304 (7%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   + GR   AR+LFD +T      W  +  G+V ++   EA+ L+  M++   +  C
Sbjct: 162 ISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENF-KC 220

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           + +T SS L A A  ++L +GK +H H +R   +    V+++L +MY  C S  +A    
Sbjct: 221 NKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEAR--- 277

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                           +FD    R+VV+W  ++  Y K  R  E    F  +L+ GI P+
Sbjct: 278 ---------------HIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPN 322

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
             +F  V  A +     +    V+G + ++G  +    F AS+ + MY + G    AR++
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIG--FDPSSFAASTLVHMYTKCGNIKNARRV 380

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F+     +   W ++I GY QN  P EA++ F ++L       D +TF+  LSA +    
Sbjct: 381 FNGMPRPDLVSWTSLISGYAQNGQPDEALQFF-ELLLKSGTQPDHITFVGVLSACTHAGL 439

Query: 346 LDLG 349
           +D G
Sbjct: 440 VDKG 443



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 4/140 (2%)

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           Q+L+H   P+  T +++L  C  +  ++ G ++H  +        V +   ++DMY K  
Sbjct: 79  QILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCN 138

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +  A  +F ++ E++  ++  MI GY + G  + A  LF  M     E D  ++ A+ S
Sbjct: 139 SLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQM----TERDNFSWTAMTS 194

Query: 623 ACSYAGLVDEGLQIFDLMQQ 642
                   +E L++F  MQ+
Sbjct: 195 GYVRHDQHEEALELFRAMQR 214


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 191/607 (31%), Positives = 316/607 (52%), Gaps = 38/607 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +V D   R +   +   + W+    R+ +A+   R M R   R        V  +L+   
Sbjct: 76  RVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRR---RCPEAHDDVVLLSLALKA 132

Query: 241 DYKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             +SAD  YG       VK G     D FV +  + MYA+ G  + ARK+FD  L RN  
Sbjct: 133 SVRSADFRYGRRLHCNAVKAGGA---DGFVMNCLVDMYAKAGDLENARKVFDRILGRNVV 189

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W +M+ G +QN    E + LF ++ E + ++  + T  S L A + L  L  G+ +H  
Sbjct: 190 SWTSMLSGCLQNGFAEEGLALFNEMRE-ERVLPSEYTMASVLMACTMLGSLHQGRWVHGS 248

Query: 356 IIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEG 395
           +IK+ +     +  AV++                     D+V W TMI  + QNG   + 
Sbjct: 249 VIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDA 308

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-GIHFEGMESYLIDM 454
           L+L  + +    + +SVT+  +LSA++ LRN  +G+  HA  ++   I  + + + L+DM
Sbjct: 309 LLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDM 368

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           YAK   +  A  IF +    ++D  TWN++IAGY +N +  EA + F QM     +P+ +
Sbjct: 369 YAKCKALSEANGIFGR--ISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAI 426

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           +I + L AC  +G++ +GK  H ++++     NV+V T+L+++Y+K   +  A  VF+++
Sbjct: 427 SIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEM 486

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            E+NSVT+  MI GYG  G S  ++ L   M    I+P+ + F ++LS CS+ G+V  G 
Sbjct: 487 SERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGK 546

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
             FD M Q + I PS +HY C+ D+L R G + EA EF++++    ++  IWG+ L  C+
Sbjct: 547 MCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADI-SIWGAFLHGCK 605

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           LH   E  E    +++ +      P ++VL+SN+Y   G W+    +R+ M+ERGL K  
Sbjct: 606 LHSRLEFGEEAINRMMVLHPDK--PDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLP 663

Query: 755 GCSWIDV 761
           GCS + +
Sbjct: 664 GCSSVGL 670



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 175/682 (25%), Positives = 311/682 (45%), Gaps = 77/682 (11%)

Query: 10  LPPPPPTATPPPPQLPQ----IHSLSPPIPKLKTPTIRSRLSKICQEG-------RPHL- 57
           LP   P        LP     +H L P    L  P++R+  +++   G       R  L 
Sbjct: 5   LPGGAPADAHSVEHLPHGGALLHRLLPACATL--PSLRALHARLLAHGLLRALRARTKLL 62

Query: 58  -----------ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
                      AR++ D   RP    +   +          +A+ L+  M++  P    D
Sbjct: 63  SCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDD 122

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
               S  LKA   + + R G+ +HC+ ++       FV N L++MY+             
Sbjct: 123 VVLLSLALKASVRSADFRYGRRLHCNAVKA-GGADGFVMNCLVDMYA------------- 168

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           K  +++ ++     KVFD +  RNVV+W +++S  ++     E +  F  M    + PS 
Sbjct: 169 KAGDLENAR-----KVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSE 223

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +  +V  A + LG       V+G ++K G   V + F+ ++ + MY + G  + AR++F
Sbjct: 224 YTMASVLMACTMLGSLHQGRWVHGSVIKHG--MVFNPFITAAVLDMYVKCGEVEDARRLF 281

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D     +  +W TMI GY QN  P++A+ LF    +   IV + VT  + LSA +QL+ L
Sbjct: 282 DELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDK-KFVHIVPNSVTIATVLSASAQLRNL 340

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
            LG+ +HA  +K  V    +V+NA+++                    +DVV+WN++I+ +
Sbjct: 341 SLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGY 400

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFE 445
           V+N + +E LML  +M+ QG   D++++   LSA   L +  +GK  H Y ++   +   
Sbjct: 401 VENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNV 460

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            + + L+++Y K   + +A+++F  ++  +R+  TW AMI GY   G    +     +ML
Sbjct: 461 YVNTALLNLYNKCADLPSAQRVF--SEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKML 518

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVI 564
           + N+ PN V   S+L  C+  G + +GK       +Y  +  ++     ++D+ +++G +
Sbjct: 519 KDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNL 578

Query: 565 NYAANVFAKIPEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
             A     K+P    ++ +   + G   H   E        M    + PD   F  ++S 
Sbjct: 579 EEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMM--VLHPDKPDFYVLMSN 636

Query: 624 --CSYAGLVDEGLQIFDLMQQE 643
              SY G  D+ L I  LMQ+ 
Sbjct: 637 LYTSY-GRWDKSLAIRRLMQER 657


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/562 (33%), Positives = 304/562 (54%), Gaps = 49/562 (8%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           AR++FD   ERN   W  ++ GY  N+ P   +E+FV++LE+        T  + L+A  
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP-SHYTLGATLNACL 150

Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNT 381
              ++DLG+Q+H Y IK        + N++                     E++V++W T
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 382 MISAFVQNGLDDE----GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           MISA  +   D+E    G+ L  +M   G M +  T+T+++S      + ++GKQ  A+ 
Sbjct: 211 MISACAE---DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 267

Query: 438 LRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ------ 490
            + G      +++  + +Y + G    A ++FE+ +  D    TWNAMI+GY Q      
Sbjct: 268 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME--DASIITWNAMISGYAQIMDSAK 325

Query: 491 -------NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
                   G   +A   FR +    + P++ T +S+L  C+ M  +E G+Q+H  +I+  
Sbjct: 326 DDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG 383

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              +V V ++L++MY+K G I  A   F ++P +  VT+T+MI GY QHG  + A+ LF 
Sbjct: 384 FLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFE 443

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  G+ P+ ITFV++LSACSYAGLV+E    FD+M++EY I+P  +HY C+ DM  R+
Sbjct: 444 EMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRL 503

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G+V +A+ F+K  G E N   IW SL+  CR HG+ ELA   A KLLE+  +      ++
Sbjct: 504 GRVEDAFSFIKRTGFEPNE-AIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIET--YI 560

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LL N+Y     W++V +VRK M++  +      SWI +   V  F + D+ HPQ+ ++Y+
Sbjct: 561 LLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQ 620

Query: 784 MLERLAMEMRNAGNKTIQNSNV 805
           +LE L  + +  G +  QN+ +
Sbjct: 621 LLENLLEKAKAIGYEPYQNAEL 642



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 47/501 (9%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++FD M  RNVV W  +V+ Y    +    +  F  ML MG  PS  +      A  +  
Sbjct: 94  RLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASC 153

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+G  +K G+E +  +   +S   +YA+LG  D A + F    E+N   W TM
Sbjct: 154 DVDLGKQVHGYAIKYGAESITSM--GNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTM 211

Query: 301 IGGYVQNNHPVE-AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           I    ++   VE  + LF+ +L +D ++ ++ T  S +S      +L+LG+Q+ A+  K 
Sbjct: 212 ISACAEDEECVELGMSLFIDML-MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ---NGLDD--- 393
                + V N+ +                    +  +++WN MIS + Q   +  DD   
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQA 330

Query: 394 -----EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
                + L +  ++++     D  T +++LS  S +   + G+Q HA  ++ G   +  +
Sbjct: 331 RSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVV 390

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            S L++MY K G I+ A + F +  +  R   TW +MI+GY+Q+G  +EA   F +M   
Sbjct: 391 NSALVNMYNKCGCIQDANKAFLEMPT--RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 448

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVI 564
            V PN +T  S+L AC+  G +E  +  H F +    Y ++  V     +IDM+ + G +
Sbjct: 449 GVRPNEITFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 506

Query: 565 NYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI-TFVAVLS 622
             A +   +   E N   +++++ G   HG  E  L+ + + K   ++P  I T++ +L+
Sbjct: 507 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADKLLELKPKGIETYILLLN 564

Query: 623 ACSYAGLVDEGLQIFDLMQQE 643
                    +  ++  LM+QE
Sbjct: 565 MYISTERWQDVARVRKLMKQE 585



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 223/494 (45%), Gaps = 80/494 (16%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD +     V W  ++ G+  N+ P   + ++ +M +   Y S  +YT  + L AC
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS--HYTLGATLNAC 149

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
             + ++ +GK VH + I+  +     + NSL ++Y+  L SLD+ +              
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAK-LGSLDSAL-------------- 194

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE-AVRQFRMMLRMGIRPSTISFVNVFPAL 236
              + F  +  +NV+ W T++S   + E  VE  +  F  ML  G+ P+  +  +V    
Sbjct: 195 ---RAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLC 251

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +  D      V     K+G E   +L V +S +++Y   G  D A ++F+   + +   
Sbjct: 252 GTRLDLNLGKQVQAFSFKIGCE--TNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIIT 309

Query: 297 WNTMIGGYVQ-----------NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           WN MI GY Q            +   +A+ +F + L+   +  D  TF S LS  S +  
Sbjct: 310 WNAMISGYAQIMDSAKDDLQARSRGFQALTIF-RDLKRSVMKPDLFTFSSILSVCSAMMA 368

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
           L+ G+Q+HA  IK+     V+V +A++                     R  V+W +MIS 
Sbjct: 369 LEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISG 428

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           + Q+G   E + L  EM+  G   + +T  +LLSA S           +A L+    H+ 
Sbjct: 429 YSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACS-----------YAGLVEEAEHYF 477

Query: 446 GM-----------ESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
            M           + Y  +IDM+ + G ++ A   F K    + ++A W++++AG   +G
Sbjct: 478 DMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFS-FIKRTGFEPNEAIWSSLVAGCRSHG 536

Query: 493 LLEEAFVAFRQMLE 506
            +E AF A  ++LE
Sbjct: 537 NMELAFYAADKLLE 550



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 96/176 (54%), Gaps = 3/176 (1%)

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           + AR++F+     +R+  TW A++ GYT N         F +MLE    P+  T+ + L 
Sbjct: 90  RDARRLFDGMP--ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 147

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC    +++LGKQ+HG++I+Y  +    +G SL  +Y+K G ++ A   F +IPEKN +T
Sbjct: 148 ACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 207

Query: 582 YTTMILGYGQ-HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           +TTMI    +     E  +SLF  M   G+ P+  T  +V+S C     ++ G Q+
Sbjct: 208 WTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQV 263



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 173/392 (44%), Gaps = 52/392 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           + +T +SV+  C    +L +GK V     +     +  V NS + +Y             
Sbjct: 240 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLY------------- 286

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT-----------ERYVEAVRQF 214
           L+  E D +      ++F+ M   +++ WN ++S Y +             R  +A+  F
Sbjct: 287 LRKGETDEAM-----RLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIF 341

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R + R  ++P   +F ++    S++   +  + ++   +K G  +++D+ V S+ + MY 
Sbjct: 342 RDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG--FLSDVVVNSALVNMYN 399

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + GC   A K F     R    W +MI GY Q+  P EAI+LF + + L  +  +++TF+
Sbjct: 400 KCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLF-EEMRLAGVRPNEITFV 458

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           S LSA S    ++  +     + K +   PV          V  +  MI  FV+ G  ++
Sbjct: 459 SLLSACSYAGLVEEAEHYFDMMKKEYCIEPV----------VDHYGCMIDMFVRLGRVED 508

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LI 452
               +   ++ GF  +    ++L++   +  N ++       LL   +  +G+E+Y  L+
Sbjct: 509 AFSFI---KRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLL 563

Query: 453 DMYAKSGL---IKTARQIFEKNDSGDRDQATW 481
           +MY  +     +   R++ ++ D G     +W
Sbjct: 564 NMYISTERWQDVARVRKLMKQEDVGILRDRSW 595



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 122/281 (43%), Gaps = 43/281 (15%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFV-----------CNNLPYE 88
           P   S +    ++G    A +LF+ +   + + WN +I G+              +  ++
Sbjct: 277 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 336

Query: 89  AILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL 148
           A+ ++  +K+S      D +T+SS+L  C+    L  G+ +H   I+        V ++L
Sbjct: 337 ALTIFRDLKRS--VMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 394

Query: 149 LNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYV 208
           +NMY+ C    DA                   K F  M  R  V W +++S Y +  +  
Sbjct: 395 VNMYNKCGCIQDAN------------------KAFLEMPTRTFVTWTSMISGYSQHGQPQ 436

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA-- 266
           EA++ F  M   G+RP+ I+FV++  A S  G  + A+  + ++ K   EY  +  V   
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK---EYCIEPVVDHY 493

Query: 267 SSAIFMYAELG----CFDFARKIFDNCLERNTEVWNTMIGG 303
              I M+  LG     F F ++      E N  +W++++ G
Sbjct: 494 GCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAG 531


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 203/714 (28%), Positives = 353/714 (49%), Gaps = 49/714 (6%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIR--CFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           D+Y  + +L+ C    + R G+AVH   ++    +    F  N LLN+Y+  L  L A  
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAK-LGPLAAAR 104

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            ++FD M  RN+V++ T+V  Y     + EA   FR + R G  
Sbjct: 105 -----------------RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHE 147

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            +      +   L ++        ++    KLG +   + FV SS I  Y+  G    AR
Sbjct: 148 VNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHD--RNAFVGSSLIDAYSLCGAVSHAR 205

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +FD  + ++   W  M+  Y +N+ P +A+  F + + +     +     S L A   L
Sbjct: 206 CVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSK-MRMAGAKPNPFVLTSVLKAAVCL 264

Query: 344 QELDLGQQLHAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMI 383
               LG+ +H   +K                     ++     V   +   DV+ W+ +I
Sbjct: 265 SSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLI 324

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           S + Q+  +++   +   M +   + +  +++ +L A +N+   D+G+Q H  +++ G  
Sbjct: 325 SRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYE 384

Query: 444 FE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            E  + + L+D+YAK   ++ + +IF      D ++ +WN +I GY Q+G  E+A   F+
Sbjct: 385 SELFVGNALMDVYAKCRNMENSLEIFRS--LRDANEVSWNTIIVGYCQSGFAEDALSVFQ 442

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M   +V    VT +SVL AC    +I+   Q+H    +   + +  V  SLID Y+K G
Sbjct: 443 EMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCG 502

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            I  A  VF  I + + V++  +I GY  HG +  AL LF  M     +P+ +TFVA+LS
Sbjct: 503 CIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLS 562

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
            C   GLV++GL +F+ M  +++I+PS +HY C+  +LGR G++ +A +F+ ++    + 
Sbjct: 563 VCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSP 622

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
           + +W +LL SC +H +  L +  A+K+LE++ ++     +VLLSN+YA  G  + V  +R
Sbjct: 623 M-VWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETT--YVLLSNMYAAAGILDQVALLR 679

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           K MR  G++KEVG SW+++ G V+ F+    +HP    I  MLE L ++    G
Sbjct: 680 KSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREG 733



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 181/392 (46%), Gaps = 45/392 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD I     V W  ++  +  N++P +A+  +S+M+ +      + +  +SVLKA 
Sbjct: 204 ARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKP--NPFVLTSVLKAA 261

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +  +GK +H   ++   +    V  +LL+MY+ C    DA                
Sbjct: 262 VCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDAR--------------- 306

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF+ +   +V+ W+ ++S Y ++ +  +A   F  M+R  + P+  S   V  A +
Sbjct: 307 ---TVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACA 363

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           ++        ++ L++KLG  Y ++LFV ++ + +YA+    + + +IF +  + N   W
Sbjct: 364 NVAFLDLGQQIHNLVIKLG--YESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSW 421

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NT+I GY Q+    +A+ +F Q +    ++   VTF S L A +    +    Q+H+ I 
Sbjct: 422 NTIIVGYCQSGFAEDALSVF-QEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIE 480

Query: 358 KNFVALPVIVLN--------------------AVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K+      IV N                    ++I+ DVVSWN +IS +  +G   + L 
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540

Query: 398 LVYEMQKQGFMIDSVTVTALLS--AASNLRNQ 427
           L   M K     + VT  ALLS   ++ L NQ
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQ 572


>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/566 (32%), Positives = 305/566 (53%), Gaps = 37/566 (6%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIF-DNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           ++N     +S I MY++    +FA  IF D   E N   +N +I G++ N  P E  E F
Sbjct: 68  FLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFE-F 126

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            Q +  + ++ D  TF  A+ A   + E+   +++H  + K  + L V + +A++     
Sbjct: 127 YQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLK 183

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RDVV WN M++ + Q G  +  L     M  +  +    TVT +
Sbjct: 184 FGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGV 243

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           LS  + + + + G+  H + ++ G      + + LIDMY K   I+ A +IFE     ++
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR--EK 301

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WN++++ + Q G  +       +ML   + P++VT+ +VLPAC+ +  +  G+++H
Sbjct: 302 DIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIH 361

Query: 537 GFSIRYLLDQN------VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           G+ I   L ++      V +  ++IDMY+K G +  A  VF ++  K+  ++  MI+GYG
Sbjct: 362 GYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYG 421

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG    AL +F  M    ++PD +TFV VLSACS+AG V +G      M+ +Y + P+ 
Sbjct: 422 MHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTI 481

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           EHY CV DMLGR G++ EAYE    +  E N + +W +LL +CRLH H+ LAEV A+++ 
Sbjct: 482 EHYTCVIDMLGRAGQLDEAYELALTMPIEANPV-VWRALLAACRLHKHAVLAEVAAQRVF 540

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  +   G +VL+SN+Y   G +E V +VR  MR++ +RK  GCSWI++   V+ F S
Sbjct: 541 ELEPEHC--GSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVS 598

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D+ HP++H IY  L  L   +R  G
Sbjct: 599 ADRAHPEAHSIYAGLNSLTARLREHG 624



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 257/562 (45%), Gaps = 61/562 (10%)

Query: 114 LKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           L+A A  +NL  GK +H +  I  F N S     SL+NMYS C                 
Sbjct: 44  LQASAHHKNLSKGKEIHSYMLINGFLN-SPLSITSLINMYSKC----------------- 85

Query: 173 YSKYDLVCKVF-DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
            ++ +    +F D     NV A+N I+S ++      E    ++ M   G+ P   +F  
Sbjct: 86  -NQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPC 144

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A   + + K    ++GLL K G E   D+F+ S+ +  Y + G  + A+  F+    
Sbjct: 145 AIKACLDVLEIKK---IHGLLFKFGLEL--DVFIGSALVNCYLKFGLMEHAQVAFEELPI 199

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+  +WN M+ GY Q       +E F ++ + + +V    T    LS  + + +L+ G+ 
Sbjct: 200 RDVVLWNAMVNGYAQIGQFEMVLETFRRMND-ESVVPSRFTVTGVLSVFAVMGDLNNGRI 258

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +H + +K      V V N++I                    E+D+ SWN+++S   Q G 
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG----- 446
            D  L L+  M   G   D VTVT +L A S+L     G++ H Y++  G+  +G     
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378

Query: 447 --MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             +++ +IDMYAK G ++ A  +FE+    ++D A+WN MI GY  +G   EA   F +M
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFER--MSNKDVASWNIMIMGYGMHGYGNEALEMFSRM 436

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
            E  + P+ VT   VL AC+  G +  G+  L     +Y +   +   T +IDM  ++G 
Sbjct: 437 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQ 496

Query: 564 INYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI-TFVAVL 621
           ++ A  +   +P E N V +  ++     H      L+   + +   +EP+   ++V + 
Sbjct: 497 LDEAYELALTMPIEANPVVWRALLAACRLH--KHAVLAEVAAQRVFELEPEHCGSYVLMS 554

Query: 622 SACSYAGLVDEGLQIFDLMQQE 643
           +     G  +E L++   M+Q+
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQ 576



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 10/280 (3%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKN 471
           T  A L A+++ +N   GK+ H+Y+L +G     +  + LI+MY+K   +  A  IF  +
Sbjct: 39  TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFS-D 97

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
            + + +   +NA+I+G+  NG  EE F  +++M    V P+  T    + AC  +  I  
Sbjct: 98  PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI-- 155

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            K++HG   ++ L+ +VF+G++L++ Y K G++ +A   F ++P ++ V +  M+ GY Q
Sbjct: 156 -KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPST 650
            G  E  L  FR M    + P   T   VLS  +  G ++ G  I    M+  Y    + 
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            +   + DM G+   + +A E + E+  E ++   W S++
Sbjct: 275 SN--SLIDMYGKCKCIEDALE-IFEMMREKDIFS-WNSIV 310



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 27/314 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+  F+ +     V+WN ++ G+      +E +L  + +M   S   S   +T + VL  
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYA-QIGQFEMVLETFRRMNDESVVPS--RFTVTGVLSV 246

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A   +L  G+ +H   ++   +    V NSL++MY  C    DA               
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA--------------- 291

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++F+ MR +++ +WN+IVS + +   +   +R    ML  GI+P  ++   V PA 
Sbjct: 292 ---LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPAC 348

Query: 237 SSLGDYKSADVVYGLLVKLG----SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           S L        ++G ++  G     + ++D+ + ++ I MYA+ G    A  +F+    +
Sbjct: 349 SHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI GY  + +  EA+E+F ++ E+ ++  D+VTF+  LSA S    +  G+  
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGRNF 467

Query: 353 HAYIIKNFVALPVI 366
              +   +   P I
Sbjct: 468 LVQMKSKYDVAPTI 481


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 190/560 (33%), Positives = 301/560 (53%), Gaps = 64/560 (11%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WN M  G+  ++ PV A++L+V ++ L  ++ +  TF   L + 
Sbjct: 27  YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLG-LLPNFFTFPFLLKSC 85

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------- 373
           ++ +    GQQ+H +++K    L + V  ++I                            
Sbjct: 86  AKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYT 145

Query: 374 ------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                   +DVVSWN MIS + + G   + L L  EM K     
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T+  ++SA +   + ++G+Q H+++  HG      + + LID+Y+K G ++TA ++ 
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELL 265

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E     ++D  +WN +I GYT   L +EA + F++ML    TPN VT+ S+LPAC  +G 
Sbjct: 266 E--GLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323

Query: 529 IELGKQLHGFSIRYL----LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV-TYT 583
           I++G+ +H +  + L    +     + TSLIDMY+K G I+ A  V        S+ T+ 
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI G+  HG +  A  +F  M+  GIEPD ITFV +LSACS++G++D G  IF  M+Q+
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQD 443

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y I P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ EL E
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGV-IWCSLLKACKIHGNLELGE 502

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV-GCSWIDVG 762
             AKKL++++  N  PG +VLLSNIYA  G W  V K+R  + ++G++K+V GCS I++ 
Sbjct: 503 SFAKKLIKIEPEN--PGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEID 560

Query: 763 GYVNRFASKDQEHPQSHKIY 782
             V+ F   D+ HPQ+ +IY
Sbjct: 561 SVVHEFIIGDKLHPQNREIY 580



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/556 (25%), Positives = 264/556 (47%), Gaps = 97/556 (17%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VF+T+   N + WN +   +  +   V A++ + +M+ +G+ P+  +F  +  + +    
Sbjct: 31  VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT------- 294
           +K    ++G ++KLG +   DL+V +S I MYA+ G  + A+K+FD    R+        
Sbjct: 91  FKEGQQIHGHVLKLGFDL--DLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALI 148

Query: 295 -----------------EV-------WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
                            E+       WN MI GY +  +  +A+ELF ++++ + +  D+
Sbjct: 149 TGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN-VKPDE 207

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------- 373
            T  + +SA +Q   ++LG+Q+H++I  +     + ++NA+I+                 
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              +DV+SWNT+I  +    L  E L+L  EM + G   + VT+ ++L A ++L   D+G
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 327

Query: 431 KQTHAYLLR--HGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
           +  H Y+ +   G+   +   + + LIDMYAK G I  A Q+ + + + +R  +TWNAMI
Sbjct: 328 RWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSD-SSAFNRSLSTWNAMI 386

Query: 486 AGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
            G+  +G    AF  F +M ++ + P+ +T   +L AC+  G ++LG+            
Sbjct: 387 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR------------ 434

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM 605
            N+F          +S   +Y  N+  K+       Y  MI   G  G+ + A  +  +M
Sbjct: 435 -NIF----------RSMRQDY--NITPKLEH-----YGCMIDLLGHSGLFKEAEEMINTM 476

Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE-HYCCVADMLGRVG 664
               +EPD + + ++L AC   G ++ G       ++  KI+P     Y  ++++    G
Sbjct: 477 P---MEPDGVIWCSLLKACKIHGNLELGES---FAKKLIKIEPENPGSYVLLSNIYATAG 530

Query: 665 KVVEAYEFVKELGEEG 680
           K  E  +    L ++G
Sbjct: 531 KWNEVXKIRTLLNDKG 546



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 233/524 (44%), Gaps = 82/524 (15%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWN +  G   ++ P  A+ LY  M   S     + +T+ 
Sbjct: 23  DGLPY-AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM--ISLGLLPNFFTFP 79

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++  + G+ +H H ++   +   +V+ SL++MY+      DA+ V  +    
Sbjct: 80  FLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHR 139

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              K+FD +  ++VV+WN ++S Y +T  Y +A+  F+ M+
Sbjct: 140 DVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMM 199

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  ++P   +   V  A +  G  +    V+  +   G  + ++L + ++ I +Y++ G 
Sbjct: 200 KTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG--FGSNLKIVNALIDLYSKCGE 257

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A ++ +    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSILP 316

Query: 339 AVSQLQELDLGQQLHAYIIK-------------------------NFVALPVIVLNAVIE 373
           A + L  +D+G+ +H YI K                         +  A P +  ++   
Sbjct: 317 ACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           R + +WN MI  F  +G  +    +   M+K G   D +T   LLSA S+    D+G+  
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436

Query: 434 HAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
              + +       +E Y  +ID+   SGL K A ++              N M       
Sbjct: 437 FRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMI-------------NTM------- 476

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
                            + P+ V   S+L AC   GN+ELG+  
Sbjct: 477 ----------------PMEPDGVIWCSLLKACKIHGNLELGESF 504



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 191/407 (46%), Gaps = 41/407 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+++FD I     V WN +I G+       +A+ L+ +M K++     D  T ++V+ AC
Sbjct: 160 AQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN--VKPDESTMATVVSAC 217

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++ ++ +G+ VH          +  + N+L+++YS C                   + +
Sbjct: 218 AQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC------------------GEVE 259

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C++ + +  ++V++WNT++  Y     Y EA+  F+ MLR G  P+ ++ +++ PA +
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 319

Query: 238 SLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-NCLERNT 294
            LG       ++  + K   G    N   + +S I MYA+ G  D A ++ D +   R+ 
Sbjct: 320 HLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSL 379

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             WN MI G+  +     A ++F ++ + + I  DD+TF+  LSA S    LDLG+ +  
Sbjct: 380 STWNAMIFGFAMHGRANAAFDIFSRMRK-NGIEPDDITFVGLLSACSHSGMLDLGRNIFR 438

Query: 355 YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
            + +++   P           +  +  MI     +GL  E   ++  M  +    D V  
Sbjct: 439 SMRQDYNITP----------KLEHYGCMIDLLGHSGLFKEAEEMINTMPMEP---DGVIW 485

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
            +LL A     N ++G+     L++  I  E   SY++  ++YA +G
Sbjct: 486 CSLLKACKIHGNLELGESFAKKLIK--IEPENPGSYVLLSNIYATAG 530


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 205/671 (30%), Positives = 346/671 (51%), Gaps = 60/671 (8%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           +VF  M   +VV+++ ++S + K  R  EA++ F  M   GI P+  SFV +  A     
Sbjct: 158 EVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSL 217

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           + +    V+ L +KLG  Y   +FVA++ I +Y + GC D A  +FD   +R+   WNTM
Sbjct: 218 ELEMGLQVHALAIKLG--YSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTM 275

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I   V+     +A+ELF  + +      D  T  + L+A ++      G+++HAY I+  
Sbjct: 276 ISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIG 335

Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD------- 393
           +   + V NA+I                     RD+++W  MI+A+++ GL D       
Sbjct: 336 LENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFN 395

Query: 394 ---------------------EGLM---LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
                                EGL    L   M ++G  +   T+T +++A   L   ++
Sbjct: 396 KMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEI 455

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
            +Q H ++++ G      +E+ LIDM +K G +  A ++F+   +   +     +MI GY
Sbjct: 456 SRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGY 515

Query: 489 TQNGLLEEAFVAF-RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
            +NGL EEA   F R   E  +  + V   S+L  C  +G  E+GKQ+H  +++      
Sbjct: 516 ARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAE 575

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           + VG S+I MYSK   I+ A   F  +P  + V++  +I G   H   + AL+++ SM+ 
Sbjct: 576 LGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEK 635

Query: 608 CGIEPDAITFVAVLSACSY--AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGK 665
            GI+PDAITFV ++SA  +  + L+DE   +F  M+  + ++P++EHY  +  +LG  G 
Sbjct: 636 AGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGL 695

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
           + EA E + ++  +  V  +W +LL  CRLH ++ + + VAK ++ M+ R+  P  +VL+
Sbjct: 696 LEEAEELINKMPFDPEV-SVWRALLDGCRLHANTSIGKRVAKHIIGMEPRD--PSTYVLV 752

Query: 726 SNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           SN+YA  G W   + VR+ MR+RGLRK    SW+ +   ++ F ++D+ HPQS+ IY  L
Sbjct: 753 SNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGL 812

Query: 786 ERLAMEMRNAG 796
           + L ++   AG
Sbjct: 813 DILILKCLKAG 823


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 195/618 (31%), Positives = 337/618 (54%), Gaps = 34/618 (5%)

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPST 226
           Y +  ++ Y     +FD + +  + +WN ++  YV+  R  +A+  F  ML  G   P  
Sbjct: 56  YAQCHHASY--ASHLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDK 113

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            ++  V  A   L        ++G   K G  Y +D FV ++ + MY   G  + A+ +F
Sbjct: 114 FTYPVVIKACGDLSLIDVGVGIHGQTFKFG--YDSDTFVQNTLLAMYMNAGEKEAAQLVF 171

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   ER    WNTMI GY +NN   +A+ ++ +++++  +  D  T +S L A   L+ +
Sbjct: 172 DPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVG-VEPDCATVVSVLPACGLLKNV 230

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           +LG+++H  + +      ++V NA+++                    +DVV+W T+I+ +
Sbjct: 231 ELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGY 290

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
           + NG     LML   MQ +G   +SV++ +LLSA  +L   + GK  HA+ +R  I  E 
Sbjct: 291 ILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEV 350

Query: 447 M-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           + E+ LI+MYAK      + ++F    +  +  A WNA+++G+ QN L  EA   F+QML
Sbjct: 351 IVETALINMYAKCNCGNLSYKVFM--GTSKKRTAPWNALLSGFIQNRLAREAIELFKQML 408

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
             +V P+  T  S+LPA   + +++    +H + IR      + V + L+D+YSK G + 
Sbjct: 409 VKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLG 468

Query: 566 YAANVF--AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           YA  +F    + +K+ + ++ +I  YG+HG  + A+ LF  M   G++P+ +TF +VL A
Sbjct: 469 YAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHA 528

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
           CS+AGLV+EG  +F+ M ++++I    +HY C+ D+LGR G++ +AY  ++ +    N  
Sbjct: 529 CSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPN-H 587

Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
            +WG+LLG+C +H + EL EV A+   +++  N+  G +VLL+ +YA  G W + ++VR 
Sbjct: 588 AVWGALLGACVIHENVELGEVAARWTFKLEPENT--GNYVLLAKLYAAVGRWGDAERVRD 645

Query: 744 EMRERGLRKEVGCSWIDV 761
            + E GLRK    S I+V
Sbjct: 646 MVNEVGLRKLPAHSLIEV 663



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 173/690 (25%), Positives = 314/690 (45%), Gaps = 88/690 (12%)

Query: 16  TATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWN 74
           +A+    +  ++H+L   +    +  + S+L+    Q      A  LFD +++P    WN
Sbjct: 22  SASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWN 81

Query: 75  TIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFI 134
            ++  +V    P++A+ L+ +M  S   T  D +TY  V+KAC +   + +G  +H    
Sbjct: 82  AMMRMYVQIGRPFDALNLFVEMLGSGR-TLPDKFTYPVVIKACGDLSLIDVGVGIHGQTF 140

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
           +   +   FV N+LL MY        A++                  VFD M+ R V++W
Sbjct: 141 KFGYDSDTFVQNTLLAMYMNAGEKEAAQL------------------VFDPMQERTVISW 182

Query: 195 NTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
           NT+++ Y +     +AV  +  M+ +G+ P   + V+V PA   L + +    V+ L+ +
Sbjct: 183 NTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQE 242

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAI 314
            G  +  ++ V ++ + MY + G    A  +     +++   W T+I GY+ N     A+
Sbjct: 243 KG--FWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSAL 300

Query: 315 ELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-- 372
            +   +++ + +  + V+  S LSA   L  L+ G+ LHA+ I+  +   VIV  A+I  
Sbjct: 301 -MLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINM 359

Query: 373 ------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                             ++    WN ++S F+QN L  E + L  +M  +    D  T 
Sbjct: 360 YAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATF 419

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS 473
            +LL A + L +       H YL+R G  +   + S L+D+Y+K G +  A QIF     
Sbjct: 420 NSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISL 479

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            D+D   W+A+IA Y ++G  + A   F QM++  V PN VT  SVL AC+  G +  G 
Sbjct: 480 KDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGF 539

Query: 534 QLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
            L  F ++ + +  +V   T +ID+  ++G +N A N+   +P                 
Sbjct: 540 SLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMP----------------- 582

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ-EYKIQP-ST 650
                            I P+   + A+L AC    ++ E +++ ++  +  +K++P +T
Sbjct: 583 -----------------ITPNHAVWGALLGAC----VIHENVELGEVAARWTFKLEPENT 621

Query: 651 EHYCCVADM---LGRVGKVVEAYEFVKELG 677
            +Y  +A +   +GR G      + V E+G
Sbjct: 622 GNYVLLAKLYAAVGRWGDAERVRDMVNEVG 651



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 206/427 (48%), Gaps = 34/427 (7%)

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           S +  F A  S  + K    ++ L++ LG    ++L   S     YA+     +A  +FD
Sbjct: 16  SLLGKFSASQSHSETKR---LHALILTLGIFSSSNL--CSKLATTYAQCHHASYASHLFD 70

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              +     WN M+  YVQ   P +A+ LFV++L     + D  T+   + A   L  +D
Sbjct: 71  KLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLID 130

Query: 348 LGQQLHAYIIK------NFV--ALPVIVLNA------------VIERDVVSWNTMISAFV 387
           +G  +H    K       FV   L  + +NA            + ER V+SWNTMI+ + 
Sbjct: 131 VGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYF 190

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           +N   ++ + +   M   G   D  TV ++L A   L+N ++G++ H  +   G  F G 
Sbjct: 191 RNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKG--FWGN 248

Query: 447 --MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             + + L+DMY K G +K A  + +  D  D+D  TW  +I GY  NG    A +    M
Sbjct: 249 IVVRNALVDMYVKCGQMKEAWLLAKGMD--DKDVVTWTTLINGYILNGDARSALMLCGMM 306

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
               V PN V+IAS+L AC  +  +  GK LH ++IR  ++  V V T+LI+MY+K    
Sbjct: 307 QCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCG 366

Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
           N +  VF    +K +  +  ++ G+ Q+ ++  A+ LF+ M    ++PD  TF ++L A 
Sbjct: 367 NLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPA- 425

Query: 625 SYAGLVD 631
            YA L D
Sbjct: 426 -YAILAD 431


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 220/765 (28%), Positives = 389/765 (50%), Gaps = 60/765 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM---KKSSPYTSCDNYTYSSVL 114
           AR++F+ +     V W+T++     + +  E+++++ +    +K SP    + Y  SS +
Sbjct: 98  ARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP----NEYILSSFI 153

Query: 115 KACA--ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +AC+  + R   +   +    ++   +   +V   L++ Y             LK   +D
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY-------------LKDGNID 200

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y++      VFD +  ++ V W T++S  VK  R   +++ F  ++   + P       V
Sbjct: 201 YARL-----VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L   +    ++  +++ G E   D  + +  I  Y + G    A K+F+    +
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEM--DASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   W T++ GY QN    EA+ELF  + +   +  D     S L++ + L  L  G Q+
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLHALGFGTQV 372

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
           HAY IK  +     V N++I+                     DVV +N MI  + + G  
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432

Query: 393 ---DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME- 448
               E L +  +M+ +      +T  +LL A+++L +  + KQ H  + ++G++ +    
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S LID+Y+    +K +R +F++     +D   WN+M AGY Q    EEA   F ++    
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKV--KDLVIWNSMFAGYVQQSENEEALNLFLELQLSR 550

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
             P+  T A+++ A   + +++LG++ H   ++  L+ N ++  +L+DMY+K G    A 
Sbjct: 551 ERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
             F     ++ V + ++I  Y  HG  ++AL +   M   GIEP+ ITFV VLSACS+AG
Sbjct: 611 KAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           LV++GL+ F+LM + + I+P TEHY C+  +LGR G++ +A E ++++  +   + +W S
Sbjct: 671 LVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAI-VWRS 728

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL  C   G+ ELAE  A+  +  D ++S  G   +LSNIYA +G W    KVR+ M+  
Sbjct: 729 LLSGCAKAGNVELAEHAAEMAILSDPKDS--GSFTMLSNIYASKGMWTEAKKVRERMKVE 786

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
           G+ KE G SWI +   V+ F SKD+ H ++++IYE+L+ L +++R
Sbjct: 787 GVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 272/573 (47%), Gaps = 50/573 (8%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           ++G    AR +FD++   +TV W T+I G V     Y ++ L+ Q+ + +     D Y  
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVP--DGYIL 252

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           S+VL AC+    L  GK +H H +R        + N L++ Y  C   + A         
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH-------- 304

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     K+F+ M  +N+++W T++S Y +   + EA+  F  M + G++P   +  
Sbjct: 305 ----------KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
           ++  + +SL        V+   +K  +   ND +V +S I MYA+  C   ARK+FD   
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIK--ANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412

Query: 291 ERNTEVWNTMIGGYVQNNHPV---EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
             +  ++N MI GY +        EA+ +F + +    I    +TF+S L A + L  L 
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIF-RDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFV 387
           L +Q+H  + K  + L +   +A+I+                    +D+V WN+M + +V
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
           Q   ++E L L  E+Q      D  T   +++AA NL +  +G++ H  LL+ G+     
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPY 591

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + + L+DMYAK G  + A + F+   +  RD   WN++I+ Y  +G  ++A     +M+ 
Sbjct: 592 ITNALLDMYAKCGSPEDAHKAFD--SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + PN +T   VL AC+  G +E G +     +R+ ++        ++ +  ++G +N 
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNK 709

Query: 567 AANVFAKIPEK-NSVTYTTMILGYGQHGMSERA 598
           A  +  K+P K  ++ + +++ G  + G  E A
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELA 742



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 216/425 (50%), Gaps = 38/425 (8%)

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
           +VV+G ++  G E   D ++++  I +Y+  G   +ARK+F+   ERN   W+TM+    
Sbjct: 64  NVVHGQIIVWGLEL--DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSAC- 120

Query: 306 QNNHPV--EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD--LGQQLHAYIIKN-- 359
            N+H +  E++ +F++     +   ++    S + A S L      +  QL ++++K+  
Sbjct: 121 -NHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179

Query: 360 ----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
               +V   +I              V +A+ E+  V+W TMIS  V+ G     L L Y+
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGL 460
           + +   + D   ++ +LSA S L   + GKQ HA++LR+G+  +  + + LID Y K G 
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           +  A ++F  N   +++  +W  +++GY QN L +EA   F  M +  + P++   +S+L
Sbjct: 300 VIAAHKLF--NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            +C  +  +  G Q+H ++I+  L  + +V  SLIDMY+K   +  A  VF      + V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417

Query: 581 TYTTMILGYGQHGMS---ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL--Q 635
            +  MI GY + G       AL++FR M+   I P  +TFV++L A   A L   GL  Q
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQ 475

Query: 636 IFDLM 640
           I  LM
Sbjct: 476 IHGLM 480



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 21/199 (10%)

Query: 535 LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           +HG  I + L+ + ++   LI++YS++G + YA  VF K+PE+N V+++TM+     HG+
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 595 SERALSLF----RSMKGCGIEPDAITFVAVLSACSYAGLVDEG-LQIFDLMQQEYKIQPS 649
            E +L +F    R+ K     P+     + + ACS  GL   G   +F L  Q + ++  
Sbjct: 126 YEESLVVFLEFWRTRKD---SPNEYILSSFIQACS--GLDGRGRWMVFQL--QSFLVKSG 178

Query: 650 TEHYCCVADML----GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
            +    V  +L     + G +  A      L E+  V   W +++  C   G S ++  +
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV--TWTTMISGCVKMGRSYVSLQL 236

Query: 706 AKKLLEMDTRNSMPGYHVL 724
             +L+E    N +P  ++L
Sbjct: 237 FYQLME---DNVVPDGYIL 252


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 306/577 (53%), Gaps = 36/577 (6%)

Query: 245 ADVVYGLLVKLG---SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
           A   + LL++LG     Y+ +L + SS  F   +     +A  +F      N  ++NT+I
Sbjct: 19  AKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQ-----YATVVFAQTPHPNIFLYNTLI 73

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL-QELDLGQQLHAYIIKN- 359
            G V N+   +A+ ++  + +      D+ TF   L A ++L     +G  LH+ +IK  
Sbjct: 74  RGMVSNDAFRDAVSVYASMRQ-HGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132

Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                FV   ++              V + + E++VVSW  +I  ++++G   E L L  
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
            + + G   DS T+  +L A S + +   G+    Y+   G +    + + L+DMYAK G
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            ++ AR++F+     ++D   W+A+I GY  NG+ +EA   F +M   NV P+   +  V
Sbjct: 253 SMEEARRVFDGMV--EKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
             AC+ +G +ELG    G         N  +GT+LID Y+K G +  A  VF  +  K+ 
Sbjct: 311 FSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDC 370

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V +  +I G    G    A  +F  M   G++PD  TFV +L  C++AGLVD+G + F  
Sbjct: 371 VVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSG 430

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M   + + P+ EHY C+ D+  R G +VEA + ++ +  E N + +WG+LLG CRLH  +
Sbjct: 431 MSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSI-VWGALLGGCRLHKDT 489

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           +LAE V K+L+E++  NS  G++VLLSNIY+    W+  +K+R  + ++G++K  GCSW+
Sbjct: 490 QLAEHVLKQLIELEPWNS--GHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWV 547

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +V G V+ F   D  HP SHKIYE LE L  ++R AG
Sbjct: 548 EVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAG 584



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 222/483 (45%), Gaps = 69/483 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F     P   ++NT+I G V N+   +A+ +Y+ M++     + DN+T+  VLKAC
Sbjct: 54  ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHG--FAPDNFTFPFVLKAC 111

Query: 118 AETRN-LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
               +   +G ++H   I+   +   FV   L+ +YS      DA               
Sbjct: 112 TRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDAR-------------- 157

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               KVFD +  +NVV+W  I+  Y+++  + EA+  FR +L MG+RP + + V +  A 
Sbjct: 158 ----KVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYAC 213

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           S +GD  S   + G + + GS  V ++FVA+S + MYA+ G  + AR++FD  +E++   
Sbjct: 214 SRVGDLASGRWIDGYMRESGS--VGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVC 271

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ +I GY  N  P EA+++F + ++ + +  D    +   SA S+L  L+LG      +
Sbjct: 272 WSALIQGYASNGMPKEALDVFFE-MQRENVRPDCYAMVGVFSACSRLGALELGNWARGLM 330

Query: 357 IKN-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
             + F++ PV+                   V   +  +D V +N +IS     G      
Sbjct: 331 DGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAF 390

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESY----- 450
            +  +M K G   D  T   LL              THA L+  G  +F GM S      
Sbjct: 391 GVFGQMVKVGMQPDGNTFVGLLCGC-----------THAGLVDDGHRYFSGMSSVFSVTP 439

Query: 451 -------LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
                  ++D+ A++GL+  A+ +  ++   + +   W A++ G   +   + A    +Q
Sbjct: 440 TIEHYGCMVDLQARAGLLVEAQDLI-RSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQ 498

Query: 504 MLE 506
           ++E
Sbjct: 499 LIE 501



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 150/327 (45%), Gaps = 23/327 (7%)

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQ----IFEKNDSGDR 476
           A  L++    KQ H  LLR G+H    ++YLI++  +S L   A Q    +F +      
Sbjct: 10  AWGLKSLHQAKQCHCLLLRLGLH---QDTYLINLLLRSSLHFAATQYATVVFAQTPH--P 64

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN-IELGKQL 535
           +   +N +I G   N    +A   +  M +H   P+  T   VL AC  + +   +G  L
Sbjct: 65  NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSL 124

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H   I+   D +VFV T L+ +YSK+G +  A  VF +IPEKN V++T +I GY + G  
Sbjct: 125 HSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCF 184

Query: 596 ERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC 655
             AL LFR +   G+ PD+ T V +L ACS  G +  G  I   M++   +  +      
Sbjct: 185 GEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSV-GNVFVATS 243

Query: 656 VADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           + DM  + G + EA      + E+  V   W +L+     +G  + A  V     EM   
Sbjct: 244 LVDMYAKCGSMEEARRVFDGMVEKDVV--CWSALIQGYASNGMPKEALDV---FFEMQRE 298

Query: 716 NSMPGYHVLLSNIYA-------EEGNW 735
           N  P  + ++    A       E GNW
Sbjct: 299 NVRPDCYAMVGVFSACSRLGALELGNW 325



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)

Query: 516 IASVLPACNPMG--NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           + S L  C   G  ++   KQ H   +R  L Q+ ++   L+          YA  VFA+
Sbjct: 1   MGSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQ 60

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            P  N   Y T+I G   +     A+S++ SM+  G  PD  TF  VL AC+
Sbjct: 61  TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACT 112


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 212/726 (29%), Positives = 378/726 (52%), Gaps = 69/726 (9%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           +++ AC+   NL  G+ +H          +  + N+L++MYS C S +DA+         
Sbjct: 12  ALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK--------- 62

Query: 172 DYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP-STI 227
                    + FD + R   R+VV WN ++S +++     EA++ FR M   G  P +++
Sbjct: 63  ---------QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSV 113

Query: 228 SFVNVFPALSSLGDYKSADV--VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +FV+V  +    G     DV  ++G +V  G E   + FV ++ +  Y +LG  D A ++
Sbjct: 114 TFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIE--REAFVRTALVDSYGKLGSLDDAWEV 171

Query: 286 FDNCLERNTEVWNT-------MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           F   L ++ E  +T       MI    QN  P E++ LF   + L+      VT +S L+
Sbjct: 172 F---LRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFY-AMNLEGTKPSGVTLVSVLN 227

Query: 339 AVSQL-----------QELD---------LGQQL-HAYIIKNFVALPVIVLNAVIERDVV 377
           A S L           Q ++         LG  L   Y   N ++      +A+   DVV
Sbjct: 228 ACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVV 287

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD---VGKQTH 434
           SWN M +A++Q+    E L+L   M  +G      T    L+A +    Q    +GK+  
Sbjct: 288 SWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQ 347

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
           + L   G+  +  + +  ++MYAK G +  AR +FE+     RD  TWN+M+A Y  +GL
Sbjct: 348 SLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGL 407

Query: 494 LEEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
            +EAF  F+ M  E  V PN VT  +VL A     +I  G+++H   +    + +  +  
Sbjct: 408 GKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN 467

Query: 553 SLIDMYSKSGVINYAANVFAKIP--EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           +L++MY+K G ++ A  +F K    +++ + +T+++ GY Q+G +ERAL LF +M+  G+
Sbjct: 468 ALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGV 527

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P+ ITF++ L+AC++ G +++G ++   M  ++ I P+++H+ C+ D+LGR G++ EA 
Sbjct: 528 RPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAE 587

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
           + + E   + +V+  W +LL +C+     E  E  A++++++D    +   +++L+++YA
Sbjct: 588 KLL-ERTSQADVI-TWMALLDACKNSKELERGERCAERIMQLDPE--VASSYIVLASMYA 643

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
             G W     +RK M ++G+R + GCS ++V   ++ F++ D+ HP+S +IY  LERL  
Sbjct: 644 AAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHW 703

Query: 791 EMRNAG 796
            ++ AG
Sbjct: 704 SIKAAG 709



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 161/656 (24%), Positives = 285/656 (43%), Gaps = 87/656 (13%)

Query: 58  ARQLFDSITRPT---TVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
           A+Q FD + R +    V WN +I  F+ N    EA+ L+  M         ++ T+ SVL
Sbjct: 61  AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPP-NSVTFVSVL 119

Query: 115 KACAETRNLRIG--KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
            +C E   L +   +A+H   +        FV  +L++ Y    S  DA  V L+  + +
Sbjct: 120 DSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEE 179

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S   + C    +   +N   W              E++R F  M   G +PS ++ V+V
Sbjct: 180 PSTSLVTCSAMISACWQN--GWPQ------------ESLRLFYAMNLEGTKPSGVTLVSV 225

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S L    +   V    +++ S    D  + ++ +  YA       AR  FD     
Sbjct: 226 LNACSMLPVGSATAFVLEQAMEVVSA-TRDNVLGTTLLTTYARSNDLSRARATFDAIQSP 284

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL---QELDLG 349
           +   WN M   Y+Q++ P EA+ LF ++L L+ +     TF++AL+A +         +G
Sbjct: 285 DVVSWNAMAAAYLQHHRPREALVLFERML-LEGVRPSVATFITALTACAAYPPQTASAIG 343

Query: 350 QQLHAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFV 387
           +++ + + +  +     V NA +                       RD ++WN+M++A+ 
Sbjct: 344 KRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYG 403

Query: 388 QNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            +GL  E   L   M+ +  +  + VT  A+L A+++  +   G++ HA ++ +G   + 
Sbjct: 404 HHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDT 463

Query: 447 -MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
            +++ L++MYAK G +  A+ IF+K+ S   D   W +++AGY Q G  E A   F  M 
Sbjct: 464 VIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQ 523

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +  V PN +T  S L ACN  G +E G +L                  L  M    G++ 
Sbjct: 524 QQGVRPNHITFISALTACNHGGKLEQGCEL------------------LSGMTPDHGIV- 564

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
                        S  ++ ++   G+ G  + A  L         + D IT++A+L AC 
Sbjct: 565 -----------PASKHFSCIVDLLGRCGRLDEAEKLLERTS----QADVITWMALLDACK 609

Query: 626 YAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            +  ++ G +  + +MQ + ++  S   Y  +A M    G+  EA    K + ++G
Sbjct: 610 NSKELERGERCAERIMQLDPEVASS---YIVLASMYAAAGRWNEAATIRKTMLDKG 662



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 7/196 (3%)

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V PN   + +++ AC+ +GN+  G+++H        ++N  +G +LI MYSK G +  A 
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 569 NVFAKIP---EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI-EPDAITFVAVLSAC 624
             F ++P   +++ VT+  MI  + ++G +  AL LFR M   G   P+++TFV+VL +C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 625 SYAGLVD-EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE-FVKELGEEGNV 682
             AGL+  E ++          I+        + D  G++G + +A+E F+++  EE + 
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 683 -LEIWGSLLGSCRLHG 697
            L    +++ +C  +G
Sbjct: 183 SLVTCSAMISACWQNG 198


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 217/763 (28%), Positives = 377/763 (49%), Gaps = 54/763 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C+ G   LAR++F+ +     V W  +I G+V +    EA+ L+ ++ +S      +  +
Sbjct: 247 CKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQP--NKVS 304

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++S+L AC    +L  G  +H +  +        V N+L++MYS C S  +A        
Sbjct: 305 FASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANAR------- 357

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      +VFD +R  N   WN +++ Y +     EA R FR M + G +P   ++
Sbjct: 358 -----------QVFDNLRSLNRTTWNAMIAGYGEG-LMEEAFRLFRAMEQKGFQPDKFTY 405

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            ++    +   D      ++  +   G  +  DL VA++ I MYA+ G  + ARK+F+  
Sbjct: 406 ASLLAICADRADLDRGKELHSQIASTG--WQTDLTVATALISMYAKCGSPEEARKVFNQM 463

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ERN   WN  I    +++   EA + F Q +  D++  D +TF++ L++ +  ++L+ G
Sbjct: 464 PERNVISWNAFISCCCRHDLGKEAFQAFKQ-MRRDDVNPDHITFITLLNSCTSPEDLERG 522

Query: 350 QQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
           + +H  I +      N VA  +I              V   +  RD+ SWN MI+A VQ+
Sbjct: 523 RYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQH 582

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           G +     L  + + +G   D  T   +L A +NL + D G+  H  + + G   +  + 
Sbjct: 583 GANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVL 642

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI MY+K G ++ A  +F  +   ++D   WNAM+A Y  +   ++A   F+QM    
Sbjct: 643 TTLIKMYSKCGSLRDAENVF--STVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEG 700

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V P+  T ++ L AC  +  +E GK++H       ++ +  V  SLI+MYS+ G +  A 
Sbjct: 701 VNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAK 760

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF K+  ++  ++  +I GY Q+G    AL  +  M    I P+  TF ++LS+ +  G
Sbjct: 761 QVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLG 820

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
             ++     + +++E+ ++PS +HY  +   LGR G + EA EF++E+  E   L +W S
Sbjct: 821 EEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAAL-MWES 879

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL +CR+H + ELAE   + LL+   + S P     L +IYA  G WE+V  ++  M+E 
Sbjct: 880 LLVACRIHLNVELAETAVEHLLDAKAQAS-PAVCEQLMSIYAAAGRWEDVSVLKTTMQEA 938

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQ---SHKIYEMLERL 788
           GL     C+ I+V    + F + +   PQ     KI E++ ++
Sbjct: 939 GLVALKSCT-IEVNSEFHNFIA-NHLSPQIGVQCKIEELVRKM 979



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 195/713 (27%), Positives = 332/713 (46%), Gaps = 57/713 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +F ++     V WN +I G+  +    EA  L+ QM++       +  T+ S+L AC
Sbjct: 154 ANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKP--NQNTFISILSAC 211

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+ +H    +        V  +L+NMY  C S                   +
Sbjct: 212 QSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGS------------------LE 253

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           L  KVF+ MR RNVV+W  ++S YV+     EA+  FR ++R GI+P+ +SF ++  A +
Sbjct: 254 LARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACT 313

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +  D      ++  + + G E   ++ V ++ I MY+  G    AR++FDN    N   W
Sbjct: 314 NPNDLGEGLKLHAYIKQAGLE--QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTW 371

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY +     EA  LF + +E      D  T+ S L+  +   +LD G++LH+ I 
Sbjct: 372 NAMIAGYGEGLME-EAFRLF-RAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIA 429

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
                    VA  +I              V N + ER+V+SWN  IS   ++ L  E   
Sbjct: 430 STGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQ 489

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYA 456
              +M++     D +T   LL++ ++  + + G+  H  + + G +    + + LI MY 
Sbjct: 490 AFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYG 549

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           + G +  AR++F +     RD  +WNAMIA   Q+G    AF  FR+        +  T 
Sbjct: 550 RCGNLADAREVFYRIRR--RDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTF 607

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            +VL A   + +++ G+ +HG   +    +++ V T+LI MYSK G +  A NVF+ + E
Sbjct: 608 INVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQE 667

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           K+ V +  M+  Y      + AL LF+ M+  G+ PD+ T+   L+AC+    V+ G +I
Sbjct: 668 KDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKI 727

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYE-FVKELGEEGNVLEIWGSLLGSCRL 695
              + +E  ++  T     + +M  R G +  A + F K L  + N    W +L+     
Sbjct: 728 HAQL-KEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINS---WNALIAGYCQ 783

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN----VDKVRKE 744
           +G   +A    + +L      +   +  +LS+ YA+ G  E     ++ ++KE
Sbjct: 784 NGQGNIALEYYELMLRASIVPNKATFTSILSS-YAQLGEEEQAFDFLESIKKE 835



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 190/669 (28%), Positives = 318/669 (47%), Gaps = 55/669 (8%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y+  L+ C   ++L  GK VH H       P  ++ N L++MYS C S  DA        
Sbjct: 103 YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDAN------- 155

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VF  M  ++VV+WN ++S Y    R  EA   F  M R G++P+  +F
Sbjct: 156 -----------NVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTF 204

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
           +++  A  S    +  + ++  + K G  Y +D+ V+++ I MY + G  + ARK+F+  
Sbjct: 205 ISILSACQSPIALEFGEQIHSRIAKAG--YESDVNVSTALINMYCKCGSLELARKVFNEM 262

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ERN   W  MI GYVQ+    EA+ LF +++    I  + V+F S L A +   +L  G
Sbjct: 263 RERNVVSWTAMISGYVQHGDSREALALFRKLIR-SGIQPNKVSFASILGACTNPNDLGEG 321

Query: 350 QQLHAYIIKNFVALPVIVLNAVIE-----------RDV---------VSWNTMISAFVQN 389
            +LHAYI +  +   V+V NA+I            R V          +WN MI+ + + 
Sbjct: 322 LKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE- 380

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
           GL +E   L   M+++GF  D  T  +LL+  ++  + D GK+ H+ +   G   +  + 
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVA 440

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LI MYAK G  + AR++F  N   +R+  +WNA I+   ++ L +EAF AF+QM   +
Sbjct: 441 TALISMYAKCGSPEEARKVF--NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDD 498

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           V P+ +T  ++L +C    ++E G+ +HG   ++ +  N  V  +LI MY + G +  A 
Sbjct: 499 VNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAR 558

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            VF +I  ++  ++  MI    QHG +  A  LFR  +  G + D  TF+ VL A +   
Sbjct: 559 EVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLE 618

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
            +D G  I  L+++             +  M  + G + +A      + E+  V   W +
Sbjct: 619 DLDAGRMIHGLVEKG-GFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVV--CWNA 675

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG---YHVLLSNIYAEEGNWENVDKVRKEM 745
           +L +   + HS+  +   K   +M      P    Y   L N  A     E+  K+  ++
Sbjct: 676 MLAA---YAHSDRGQDALKLFQQMQLEGVNPDSSTYSTAL-NACARLTAVEHGKKIHAQL 731

Query: 746 RERGLRKEV 754
           +E G+  + 
Sbjct: 732 KEAGMETDT 740



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 23/296 (7%)

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           R+I E N++ D           G +  G       A + + +  V  N+   A  L  C 
Sbjct: 59  RRIRESNNTWDEGPKIVRDTREGKSIKG-------AVQLLGKRGVQANLNFYARRLQQCV 111

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
              ++  GK++H          ++++   LI MYSK G I  A NVF  + +K+ V++  
Sbjct: 112 LAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNA 171

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ-- 642
           MI GY  HG  + A  LF  M+  G++P+  TF+++LSAC     ++ G QI   + +  
Sbjct: 172 MISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAG 231

Query: 643 -EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
            E  +  ST     + +M  + G +  A +   E+  E NV+  W +++     HG S  
Sbjct: 232 YESDVNVST----ALINMYCKCGSLELARKVFNEM-RERNVVS-WTAMISGYVQHGDSRE 285

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD---KVRKEMRERGLRKEV 754
           A  + +KL+    R+ +    V  ++I     N  ++    K+   +++ GL +EV
Sbjct: 286 ALALFRKLI----RSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEV 337


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 198/573 (34%), Positives = 316/573 (55%), Gaps = 56/573 (9%)

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-----FDFARKIFDNCLE 291
           +SL   K A   + L+++ G  ++ D ++A S +  YA +       F+ + ++FD   +
Sbjct: 45  TSLHHLKQA---HALILRTG--HLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRK 99

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            N  +WN MI   ++NN P +AI L+ +++ +     +  T+ + L A S    +  G Q
Sbjct: 100 PNVFLWNCMIKVCIENNEPFKAILLYYEMM-VAHFRPNKYTYPAVLKACSDAGVVAEGVQ 158

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +HA+++K+ +     +L++ I R   S+  ++ A  +  LDD           +G  +D+
Sbjct: 159 VHAHLVKHGLGGDGHILSSAI-RMYASFGRLVEA--RRILDD-----------KGGEVDA 204

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--------SYLIDMYAKSGLIKT 463
           V   A++         +  ++           FEGM         + +I  +++ G+++ 
Sbjct: 205 VCWNAMIDGYLRFGEVEAAREL----------FEGMPDRSMISTWNAMISGFSRCGMVEV 254

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR+ F  ++  +RD+ +W+AMI GY Q G   EA   F QM +  + P    + SVL AC
Sbjct: 255 AREFF--DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 312

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             +G ++ G+ +H ++ R  +  +  +GTSL+DMY+K G I+ A  VF K+  K   ++ 
Sbjct: 313 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 372

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI G   HG +E A+ LF  M    I P+ ITFV VL+AC++ GLV +GL IF+ M++E
Sbjct: 373 AMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 429

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y ++P  EHY C+ D+LGR G + EA + V  +  E     +WG+LLG+CR HG+ EL E
Sbjct: 430 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE-PTPAVWGALLGACRKHGNVELGE 488

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG- 762
            V K LLE++ +NS  G + LLSNIYA+ G WE V +VRK M+ERG++   G S ID+G 
Sbjct: 489 RVGKILLELEPQNS--GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 546

Query: 763 GYVNRFASKDQEHPQSHKIYEML----ERLAME 791
           G V++F   D  HPQ   IY+ML    ERL ME
Sbjct: 547 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQME 579



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 233/512 (45%), Gaps = 67/512 (13%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y  ++   +VFD +R+ NV  WN ++   ++     +A+  +  M+    RP+  ++  V
Sbjct: 84  YLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAV 143

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN-CLE 291
             A S  G       V+  LVK G     D  + SSAI MYA  G    AR+I D+   E
Sbjct: 144 LKACSDAGVVAEGVQVHAHLVKHG--LGGDGHILSSAIRMYASFGRLVEARRILDDKGGE 201

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +   WN MI GY++      A ELF  + +   I     T+ + +S  S+   +++ ++
Sbjct: 202 VDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMI----STWNAMISGFSRCGMVEVARE 257

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                            + + ERD +SW+ MI  ++Q G   E L + ++MQK+      
Sbjct: 258 F---------------FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 302

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK 470
             + ++LSA +NL   D G+  H Y  R+ I  +G + + L+DMYAK G I  A ++FEK
Sbjct: 303 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEK 362

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               +++ ++WNAMI G   +G  E+A   F +M   ++ PN +T   VL AC   G ++
Sbjct: 363 --MSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQ 417

Query: 531 LGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
            G  + +     Y ++  +     ++D+  ++G++  A  V + IP              
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP-------------- 463

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP- 648
                                EP    + A+L AC   G V+ G ++  ++    +++P 
Sbjct: 464 --------------------TEPTPAVWGALLGACRKHGNVELGERVGKIL---LELEPQ 500

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           ++  Y  ++++  + G+  E  E  K + E G
Sbjct: 501 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 532



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 192/446 (43%), Gaps = 67/446 (15%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++FD + +P   +WN +I   + NN P++AILLY +M  +  +   + YTY +VLKAC++
Sbjct: 92  RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVA--HFRPNKYTYPAVLKACSD 149

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--------------- 164
              +  G  VH H ++        + +S + MY++    ++A  +               
Sbjct: 150 AGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 209

Query: 165 ----GLKYVEVDYSK---------------------------YDLVCKVFDTMRRRNVVA 193
                L++ EV+ ++                            ++  + FD M+ R+ ++
Sbjct: 210 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 269

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W+ ++  Y++   ++EA+  F  M +  IRP      +V  A ++LG       ++    
Sbjct: 270 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 329

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           +   +   D  + +S + MYA+ G  D A ++F+    +    WN MIGG   +    +A
Sbjct: 330 RNSIQL--DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDA 387

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
           I+LF ++    +I  +++TF+  L+A +    +  G  +   + K +           +E
Sbjct: 388 IDLFSKM----DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY----------GVE 433

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
             +  +  ++    + GL  E   +V  +  +          ALL A     N ++G++ 
Sbjct: 434 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP---TPAVWGALLGACRKHGNVELGERV 490

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSG 459
              LL       G  + L ++YAK+G
Sbjct: 491 GKILLELEPQNSGRYTLLSNIYAKAG 516



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   + G   +AR+ FD +     + W+ +I G++      EA+ ++ QM+K  
Sbjct: 238 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 297

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
                  +   SVL ACA    L  G+ +H +  R        +  SL++MY+ C     
Sbjct: 298 IRPR--KFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC----- 350

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                         + DL  +VF+ M  + V +WN ++       R  +A+  F    +M
Sbjct: 351 -------------GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS---KM 394

Query: 221 GIRPSTISFVNVFPALSSLG 240
            I P+ I+FV V  A +  G
Sbjct: 395 DINPNEITFVGVLNACAHGG 414


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 227/745 (30%), Positives = 340/745 (45%), Gaps = 127/745 (17%)

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD----- 172
           A+  +    +AVH H +     P   + N L++ Y    +   A  +  K  + D     
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 173 --YSKYD------LVCKVFDT--MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
              S Y       L  ++F+   M  R+ V++N +++ +  +     A++ F  M R+G 
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126

Query: 223 RPSTISFVNVFPALSSLGDYKS-------------ADVVYGLLVKLGSEYVN--DLFVAS 267
            P   +F +V  ALS + D ++             A  V  +L  L S YV+     + +
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186

Query: 268 SAIFMYAELGCFDFARKIFDNCL--ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
           S + M A       ARK+FD      R+   W T+I GYV+N+  V A EL         
Sbjct: 187 SCVLMAA-------ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAAREL--------- 230

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
                                                     L  + +   V+WN MIS 
Sbjct: 231 ------------------------------------------LEGMTDHIAVAWNAMISG 248

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +V  G  +E   L+  M   G  +D  T T+++SAASN    ++G+Q HAY+LR  +   
Sbjct: 249 YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPS 308

Query: 446 G-----MESYLIDMYAKSGLIKTARQIFEKNDSGD------------------------- 475
           G     + + LI +Y + G +  AR++F+K    D                         
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFR 368

Query: 476 ----RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
               R   TW  MI+G  QNG  EE    F QM    + P     A  + +C+ +G+++ 
Sbjct: 369 EMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDN 428

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
           G+QLH   I+   D ++ VG +LI MYS+ G++  A  VF  +P  +SV++  MI    Q
Sbjct: 429 GQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQ 488

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE 651
           HG   +A+ L+  M    I PD ITF+ +LSACS+AGLV EG   FD M+  Y I P  +
Sbjct: 489 HGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEED 548

Query: 652 HYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
           HY  + D+L R G   EA    + +  E     IW +LL  C +HG+ EL    A +LLE
Sbjct: 549 HYSRLIDLLCRAGMFSEAKNVTESMPFEPGA-PIWEALLAGCWIHGNMELGIQAADRLLE 607

Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
           +  +    G ++ LSN+YA  G W+ V +VRK MRERG++KE GCSWI+V   V+ F   
Sbjct: 608 LMPQQD--GTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVD 665

Query: 772 DQEHPQSHKIYEMLERLAMEMRNAG 796
           D  HP+ H +Y  LE+L  EMR  G
Sbjct: 666 DAVHPEVHAVYRYLEQLVHEMRKLG 690



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 240/588 (40%), Gaps = 132/588 (22%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDS--ITRPTTVIWNTIIIGFV 81
           +P    L   IPK       + LS     G   LA QLF++  ++   TV +N +I  F 
Sbjct: 47  IPYARYLFDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFS 106

Query: 82  CNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC----- 136
            ++  + A+ L+ QMK+       D +T+SSVL A +    L   +  HC  + C     
Sbjct: 107 HSHDGHAALQLFVQMKRLGFVP--DPFTFSSVLGALS----LIADEETHCQQLHCEVFKW 160

Query: 137 --FSNPSRFVYNSLLNMYSTCLSS---------------LDAEMVGLK-----------Y 168
              S PS  V N+L++ Y +C SS                D    G +           Y
Sbjct: 161 GALSVPS--VLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGY 218

Query: 169 VEVDYSKYDLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
           V  D    DLV   ++ + M     VAWN ++S YV    Y EA    R M  +GI+   
Sbjct: 219 VRND----DLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDE 274

Query: 227 ISFVNVFPALSSLGDYKSADVVYG----LLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            ++ +V  A S+ G +     V+      +V+    +V  L V ++ I +Y   G    A
Sbjct: 275 YTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV--LSVNNALITLYTRCGKLVEA 332

Query: 283 RKIFDN---------------CLE----------------RNTEVWNTMIGGYVQNNHPV 311
           R++FD                C+                 R+   W  MI G  QN    
Sbjct: 333 RRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGE 392

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
           E ++LF Q ++L+ +   D  +  A+++ S L  LD GQQLH+ II+      + V NA+
Sbjct: 393 EGLKLFNQ-MKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNAL 451

Query: 372 IER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           I                      D VSWN MI+A  Q+G   + + L  +M K+  + D 
Sbjct: 452 ITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDR 511

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-------------EGMESYLIDMYAKS 458
           +T   +LSA S           HA L++ G H+             E   S LID+  ++
Sbjct: 512 ITFLTILSACS-----------HAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRA 560

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           G+   A+ + E     +     W A++AG   +G +E    A  ++LE
Sbjct: 561 GMFSEAKNVTESMPF-EPGAPIWEALLAGCWIHGNMELGIQAADRLLE 607



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 50/316 (15%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS      R   A  +F  +   + + W  +I G   N    E + L++QMK       C
Sbjct: 351 LSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEG-LEPC 409

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D Y Y+  + +C+   +L  G+ +H   I+   + S  V N+L+ MYS C         G
Sbjct: 410 D-YAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRC---------G 459

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
           L  VE   +       VF TM   + V+WN +++   +    V+A++ +  ML+  I P 
Sbjct: 460 L--VEAADT-------VFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPD 510

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA----------SSAIFMYAE 275
            I+F+ +  A S  G           LVK G  Y + + V           S  I +   
Sbjct: 511 RITFLTILSACSHAG-----------LVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCR 559

Query: 276 LGCFDFARKIFDNC-LERNTEVWNTMIGG-YVQNNHPVEAIELFVQVLE--LDEIVFDDV 331
            G F  A+ + ++   E    +W  ++ G ++  N     +EL +Q  +  L+ +   D 
Sbjct: 560 AGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGN-----MELGIQAADRLLELMPQQDG 614

Query: 332 TFLSALSAVSQLQELD 347
           T++S  +  + L + D
Sbjct: 615 TYISLSNMYAALGQWD 630


>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Vitis vinifera]
          Length = 629

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 186/566 (32%), Positives = 305/566 (53%), Gaps = 37/566 (6%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIF-DNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           ++N     +S I MY++    +FA  IF D   E N   +N +I G++ N  P E  E F
Sbjct: 68  FLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFE-F 126

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            Q +  + ++ D  TF  A+ A   + E+   +++H  + K  + L V + +A++     
Sbjct: 127 YQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLK 183

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           RDVV WN M++ + Q G  +  L     M  +  +    TVT +
Sbjct: 184 FGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGV 243

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDR 476
           LS  + + + + G+  H + ++ G      + + LIDMY K   I+ A +IFE     ++
Sbjct: 244 LSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR--EK 301

Query: 477 DQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH 536
           D  +WN++++ + Q G  +       +ML   + P++VT+ +VLPAC+ +  +  G+++H
Sbjct: 302 DIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIH 361

Query: 537 GFSIRYLLDQN------VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
           G+ I   L ++      V +  ++IDMY+K G +  A  VF ++  K+  ++  MI+GYG
Sbjct: 362 GYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYG 421

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            HG    AL +F  M    ++PD +TFV VLSACS+AG V +G      M+ +Y + P+ 
Sbjct: 422 MHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTI 481

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
           EHY CV DMLGR G++ EAYE    +  E N + +W +LL +CRLH H+ LAEV A+++ 
Sbjct: 482 EHYTCVIDMLGRAGQLDEAYELALTMPIEANPV-VWRALLAACRLHKHAVLAEVAAQRVF 540

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  +   G +VL+SN+Y   G +E V +VR  MR++ +RK  GCSWI++   V+ F S
Sbjct: 541 ELEPEHC--GSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVS 598

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
            D+ HP++H IY  L  L   +R  G
Sbjct: 599 ADRAHPEAHSIYAGLNSLTARLREHG 624



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 257/562 (45%), Gaps = 61/562 (10%)

Query: 114 LKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           L+A A  +NL  GK +H +  I  F N S     SL+NMYS C                 
Sbjct: 44  LQASAHHKNLSKGKEIHSYMLINGFLN-SPLSITSLINMYSKC----------------- 85

Query: 173 YSKYDLVCKVF-DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
            ++ +    +F D     NV A+N I+S ++      E    ++ M   G+ P   +F  
Sbjct: 86  -NQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPC 144

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
              A   + + K    ++GLL K G E   D+F+ S+ +  Y + G  + A+  F+    
Sbjct: 145 AIKACLDVLEIKK---IHGLLFKFGLEL--DVFIGSALVNCYLKFGLMEHAQVAFEELPI 199

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           R+  +WN M+ GY Q       +E F ++ + + +V    T    LS  + + +L+ G+ 
Sbjct: 200 RDVVLWNAMVNGYAQIGQFEMVLETFRRMND-ESVVPSRFTVTGVLSVFAVMGDLNNGRI 258

Query: 352 LHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGL 391
           +H + +K      V V N++I                    E+D+ SWN+++S   Q G 
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG----- 446
            D  L L+  M   G   D VTVT +L A S+L     G++ H Y++  G+  +G     
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDD 378

Query: 447 --MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
             +++ +IDMYAK G ++ A  +FE+    ++D A+WN MI GY  +G   EA   F +M
Sbjct: 379 VLLKNAVIDMYAKCGSMRDAHLVFER--MSNKDVASWNIMIMGYGMHGYGNEALEMFSRM 436

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
            E  + P+ VT   VL AC+  G +  G+  L     +Y +   +   T +IDM  ++G 
Sbjct: 437 CEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQ 496

Query: 564 INYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI-TFVAVL 621
           ++ A  +   +P E N V +  ++     H      L+   + +   +EP+   ++V + 
Sbjct: 497 LDEAYELALTMPIEANPVVWRALLAACRLH--KHAVLAEVAAQRVFELEPEHCGSYVLMS 554

Query: 622 SACSYAGLVDEGLQIFDLMQQE 643
           +     G  +E L++   M+Q+
Sbjct: 555 NVYGAVGRYEEVLEVRHTMRQQ 576



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 10/280 (3%)

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKN 471
           T  A L A+++ +N   GK+ H+Y+L +G     +  + LI+MY+K   +  A  IF  +
Sbjct: 39  TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIF-SD 97

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIEL 531
            + + +   +NA+I+G+  NG  EE F  +++M    V P+  T    + AC  +  I  
Sbjct: 98  PTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI-- 155

Query: 532 GKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
            K++HG   ++ L+ +VF+G++L++ Y K G++ +A   F ++P ++ V +  M+ GY Q
Sbjct: 156 -KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQ 214

Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPST 650
            G  E  L  FR M    + P   T   VLS  +  G ++ G  I    M+  Y    + 
Sbjct: 215 IGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAV 274

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
            +   + DM G+   + +A E + E+  E ++   W S++
Sbjct: 275 SN--SLIDMYGKCKCIEDALE-IFEMMREKDIFS-WNSIV 310



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 27/314 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
           A+  F+ +     V+WN ++ G+      +E +L  + +M   S   S   +T + VL  
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIG-QFEMVLETFRRMNDESVVPS--RFTVTGVLSV 246

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A   +L  G+ +H   ++   +    V NSL++MY  C    DA               
Sbjct: 247 FAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA--------------- 291

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
               ++F+ MR +++ +WN+IVS + +   +   +R    ML  GI+P  ++   V PA 
Sbjct: 292 ---LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPAC 348

Query: 237 SSLGDYKSADVVYGLLVKLG----SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           S L        ++G ++  G     + ++D+ + ++ I MYA+ G    A  +F+    +
Sbjct: 349 SHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK 408

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN MI GY  + +  EA+E+F ++ E+ ++  D+VTF+  LSA S    +  G+  
Sbjct: 409 DVASWNIMIMGYGMHGYGNEALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGRNF 467

Query: 353 HAYIIKNFVALPVI 366
              +   +   P I
Sbjct: 468 LVQMKSKYDVAPTI 481


>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 221/792 (27%), Positives = 377/792 (47%), Gaps = 121/792 (15%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  S +S + +  R   ARQLFD ++    V WNT+I G++ NN+  EA  L+  M +  
Sbjct: 50  TYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERD 109

Query: 101 PYT-----SCDNYTYSSVLKACAETRNL---RIGKAVHCHFIRCFSNPSRF--VYNSLLN 150
            ++     +C  YT    L+   E   L   ++  A     I  ++   +F         
Sbjct: 110 NFSWALMITC--YTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQ 167

Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           M +  L S ++ + G         K  L  + F++M  RNVV+WN +V+ YVK+     A
Sbjct: 168 MPAKDLVSYNSMLAGY----TQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSA 223

Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
            + F  +      P+ +S+V +   L+           YG + +                
Sbjct: 224 WQLFEKI----PNPNAVSWVTMLCGLAK----------YGKMAE---------------- 253

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
                      AR++FD    +N   WN MI  YVQ+    EA++LF ++   D      
Sbjct: 254 -----------ARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKD-----S 297

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------R 374
           V++ + ++   ++ +LD  +Q++  +    +     +++ +I+                 
Sbjct: 298 VSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAH 357

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DVV WN+MI+ + ++G  DE L L  +M     + +SV+   ++S               
Sbjct: 358 DVVCWNSMIAGYSRSGRMDEALNLFRQMP----IKNSVSWNTMISG-------------- 399

Query: 435 AYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
                               YA++G +  A +IF+     +++  +WN++IAG+ QN L 
Sbjct: 400 --------------------YAQAGQMDRATEIFQA--MREKNIVSWNSLIAGFLQNNLY 437

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
            +A  +   M +    P+  T A  L AC  +  +++G QLH + ++     ++FVG +L
Sbjct: 438 LDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNAL 497

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           I MY+K G +  A  VF  I   + +++ ++I GY  +G + +A   F  M    + PD 
Sbjct: 498 IAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDE 557

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           +TF+ +LSACS+AGL ++GL IF  M +++ I+P  EHY C+ D+LGRVG++ EA+  V+
Sbjct: 558 VTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVR 617

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
            +  + N   +WGSLLG+CR+H + EL    A++L E++  N+    ++ LSN++AE G 
Sbjct: 618 GMKVKANA-GLWGSLLGACRVHKNLELGRFAAERLFELEPHNA--SNYITLSNMHAEAGR 674

Query: 735 WENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           WE V++VR  MR +   K+ GCSWI+V   +  F S D    +   I  +L  LA  MR+
Sbjct: 675 WEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQIILNTLAAHMRD 734

Query: 795 AGNKTIQNSNVD 806
             N +   S  D
Sbjct: 735 KCNTSDMKSAFD 746



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 135/571 (23%), Positives = 245/571 (42%), Gaps = 104/571 (18%)

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           K +   ++F  M  +N+V +N+++S   K  R  +A + F  M          S  N+  
Sbjct: 32  KVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQM----------SLRNLVS 81

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVN-----DLFVASSAIFMYAELGCFDFARKIFDNC 289
             + +  Y     ++  +V+  SE  +     D F  +  I  Y   G  + AR++ +  
Sbjct: 82  WNTMIAGY-----LHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 136

Query: 290 LER-NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            ++ +T  WN MI GY +     +A ++F Q+   D + ++     S L+  +Q  ++ L
Sbjct: 137 PDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYN-----SMLAGYTQNGKMHL 191

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
             Q                  ++ ER+VVSWN M++ +V++G D      ++E       
Sbjct: 192 ALQF---------------FESMTERNVVSWNLMVAGYVKSG-DLSSAWQLFEKIPNPNA 235

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQ 466
           +  VT+   L+          GK   A  L   +  + + S+  +I  Y +   +  A +
Sbjct: 236 VSWVTMLCGLA--------KYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVK 287

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+K     +D  +W  +I GY + G L+EA   + QM   ++T     ++ ++      
Sbjct: 288 LFKK--MPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQN---- 341

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           G I+   Q+  FS   +   +V    S+I  YS+SG ++ A N+F ++P KNSV++ TMI
Sbjct: 342 GRIDEADQM--FS--RIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMI 397

Query: 587 LGYGQHGMSERALSLFRSMKGCGI-------------------------------EPDAI 615
            GY Q G  +RA  +F++M+   I                               +PD  
Sbjct: 398 SGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQS 457

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD----MLGRVGKVVEAYE 671
           TF   LSAC+    +  G Q+      EY ++    +   V +    M  + G+V  A +
Sbjct: 458 TFACTLSACANLAALQVGNQL-----HEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQ 512

Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
             +++  E   L  W SL+    L+G++  A
Sbjct: 513 VFRDI--ECVDLISWNSLISGYALNGYANKA 541



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 174/377 (46%), Gaps = 60/377 (15%)

Query: 36  KLKTPTIRSRLSKIC---QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL 92
           K+  P   S ++ +C   + G+   AR+LFD +     V WN +I  +V +    EA+ L
Sbjct: 229 KIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKL 288

Query: 93  YSQM--KKSSPYTS----------------------CDNYTYSSVLKACAETRNLRIGKA 128
           + +M  K S  +T+                      C + T  + L +    +N RI +A
Sbjct: 289 FKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMS-GLIQNGRIDEA 347

Query: 129 ------VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS-------- 174
                 +  H + C        +NS++  YS     +D  +   + + +  S        
Sbjct: 348 DQMFSRIGAHDVVC--------WNSMIAGYSRS-GRMDEALNLFRQMPIKNSVSWNTMIS 398

Query: 175 ------KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                 + D   ++F  MR +N+V+WN++++ +++   Y++A++   MM + G +P   +
Sbjct: 399 GYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQST 458

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F     A ++L   +  + ++  ++K G  Y+NDLFV ++ I MYA+ G    A ++F +
Sbjct: 459 FACTLSACANLAALQVGNQLHEYILKSG--YMNDLFVGNALIAMYAKCGRVQSAEQVFRD 516

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
               +   WN++I GY  N +  +A + F Q +  + +V D+VTF+  LSA S     + 
Sbjct: 517 IECVDLISWNSLISGYALNGYANKAFKAFEQ-MSSERVVPDEVTFIGMLSACSHAGLANQ 575

Query: 349 GQQLHAYIIKNFVALPV 365
           G  +   +I++F   P+
Sbjct: 576 GLDIFKCMIEDFAIEPL 592


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 189/562 (33%), Positives = 318/562 (56%), Gaps = 37/562 (6%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           ++F  ++ I  YA+    + A ++FD   + ++  +NT+I  Y +      A +LF   L
Sbjct: 73  NVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF---L 129

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLG--QQLHAYIIKNFVALPVIVLNAVI------- 372
           E+ E   D   F   LS +     +++G  +QLHA  +   +   V V NA+I       
Sbjct: 130 EMREAFLDMDGF--TLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 373 --------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                         +RD VSWN+M+ A++Q+    + L L  EM  +G ++D  T+ ++L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAK-SGLIKTARQIFEKNDSGDR 476
           +A +N+++   G Q HA L++ G H    + S LID+Y+K  G +   R++F+  +  + 
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFD--EISNP 305

Query: 477 DQATWNAMIAGYT-QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           D   WN MI+GY+    L +EA   FRQ+      P+  ++  V+ AC+ M +   G+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 536 HGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGM 594
           HG +++  +  N + V  +LI MYSK G +  A  +F  +PE N+V+Y +MI GY QHGM
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 595 SERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC 654
             ++L LF+ M      P  ITF++VL+AC++ G V++G   F++M+Q++ I+P   H+ 
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 655 CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT 714
           C+ D+LGR GK+ EA   ++ +  +      W +LLG+CR+HG+ ELA   A +LL++D 
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFX-WSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 715 RNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQE 774
            N+ P  +V+L+NIY++ G  ++   VRK MR+RG++K+ GCSWI+V   ++ F ++D  
Sbjct: 545 LNAAP--YVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF 602

Query: 775 HPQSHKIYEMLERLAMEMRNAG 796
           HP   KI E LE +  +++  G
Sbjct: 603 HPMIKKIQEYLEEMMRKIKKVG 624



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 257/553 (46%), Gaps = 89/553 (16%)

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +++   LK C   R+LR GK++H  +I+ F   S ++ N  L +YS C            
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKC------------ 56

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
                  +     +VFD     NV ++NT++S Y K E YVE   Q   +     +P ++
Sbjct: 57  ------RRLSAARRVFDHTHDCNVFSFNTLISAYAK-ESYVEVAHQ---LFDEMPQPDSV 106

Query: 228 SFVNVFPALSSLGDYKSADVVY--------------------------GLLVKLGS---- 257
           S+  +  A +  GD + A  ++                          GL+ +L +    
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVV 166

Query: 258 ----EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV-WNTMIGGYVQNNHPVE 312
                YV+   V ++ I  Y++ G    AR+IF    E   EV WN+M+  Y+Q+    +
Sbjct: 167 TGLDSYVS---VGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK 223

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI 366
           A+EL+++ + +  ++ D  T  S L+A + +Q+L  G Q HA +IK      + V   +I
Sbjct: 224 ALELYLE-MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282

Query: 367 ---------------VLNAVIERDVVSWNTMISAF-VQNGLDDEGLMLVYEMQKQGFMID 410
                          V + +   D+V WNTMIS + +   L DE L    ++Q  G   D
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPD 342

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYAKSGLIKTARQIF 468
             ++  ++SA SN+ +   G+Q H   L+  I  +   + + LI MY+K G ++ A+ +F
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLF 402

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +     + +  ++N+MIAGY Q+G+  ++   F++MLE + TP  +T  SVL AC   G 
Sbjct: 403 DTMP--EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGR 460

Query: 529 IELGK-QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           +E GK   +    ++ ++      + +ID+  ++G ++ A  +   IP        + +L
Sbjct: 461 VEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALL 520

Query: 588 GYGQ-HGMSERAL 599
           G  + HG  E A+
Sbjct: 521 GACRIHGNVELAI 533



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 218/488 (44%), Gaps = 54/488 (11%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           +S   +E    +A QLFD + +P +V +NT+I  +        A  L+ +M+++  +   
Sbjct: 81  ISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA--FLDM 138

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY--NSLLNMYSTCLSSLDAEM 163
           D +T S ++ AC     + +G     H +   +    +V   N+L+  YS      +A  
Sbjct: 139 DGFTLSGIITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           +   ++  D                R+ V+WN++V  Y++     +A+  +  M   G+ 
Sbjct: 195 I-FHWLSED----------------RDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLI 237

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFA 282
               +  +V  A +++ D       +  L+K G  Y  +  V S  I +Y++  GC    
Sbjct: 238 VDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSG--YHQNSHVGSGLIDLYSKCGGCMLDC 295

Query: 283 RKIFDNCLERNTEVWNTMIGGY-VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           RK+FD     +  +WNTMI GY +  +   EA+E F Q+  +     DD + +  +SA S
Sbjct: 296 RKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRP-DDCSLVCVISACS 354

Query: 342 QLQELDLGQQLHAYIIK-NFVALPVIVLNAVI--------------------ERDVVSWN 380
            +     G+Q+H   +K +  +  + V NA+I                    E + VS+N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL-LR 439
           +MI+ + Q+G+  + L L   M +  F   ++T  ++L+A ++    + GK     +  +
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQK 474

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            GI  E G  S +ID+  ++G +  A ++ E     D     W+A++     +G +E A 
Sbjct: 475 FGIEPEAGHFSCMIDLLGRAGKLSEAERLIE-TIPFDPGFFXWSALLGACRIHGNVELAI 533

Query: 499 VAFRQMLE 506
            A  ++L+
Sbjct: 534 KAANRLLQ 541



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%)

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D NVF   +LI  Y+K   +  A  +F ++P+ +SV+Y T+I  Y + G ++ A  LF  
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 605 MKGCGIEPDAITFVAVLSAC 624
           M+   ++ D  T   +++AC
Sbjct: 131 MREAFLDMDGFTLSGIITAC 150



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 21  PPQLPQIHSLSPP--IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P Q  Q+H L+    IP  +     + ++   + G    A+ LFD++    TV +N++I 
Sbjct: 359 PSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIA 418

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGK 127
           G+  + + ++++ L+ +M +     +  N T+ SVL ACA T  +  GK
Sbjct: 419 GYAQHGMGFQSLHLFQRMLEMDFTPT--NITFISVLAACAHTGRVEDGK 465


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 167/448 (37%), Positives = 264/448 (58%), Gaps = 6/448 (1%)

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           ++AY    FV L   V + ++ER +VSWNTMI  + +N ++ E L + +EM+ +GF    
Sbjct: 105 INAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSE 164

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK 470
            T++++LSA     +    K+ H   ++  +     + + L+D+YAK G+I  A Q+FE 
Sbjct: 165 FTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFES 224

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               D+   TW++M+AGY Q+   EEA + +R+    ++  N  T++SV+ AC+ +  + 
Sbjct: 225 MQ--DKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALI 282

Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
            GKQ+H    +     NVFV +S +DMY+K G +  +  +F+++ EKN   + T+I G+ 
Sbjct: 283 EGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFA 342

Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
           +H   +  + LF  M+  G+ P+ +TF ++LS C + GLV+EG + F LM+  Y + P+ 
Sbjct: 343 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 402

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
            HY C+ D+LGR G + EAYE +K +  E     IWGSLL SCR+  + ELAEV AKKL 
Sbjct: 403 VHYSCMVDILGRAGLLSEAYELIKSIPFEPTA-SIWGSLLASCRVCKNLELAEVAAKKLF 461

Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
           E++  N+  G HVLLSNIYA    WE + K RK +R+  ++K  G SWID+   V+ F  
Sbjct: 462 ELEPENA--GNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRV 519

Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAGNK 798
            +  HP+  +I  ML+ L +E+R  G K
Sbjct: 520 GESSHPRIREICTMLDNLVIELRKFGYK 547



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 182/369 (49%), Gaps = 27/369 (7%)

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F+ +    +  G    A   +G  +++  E   D+ +++  I  Y++ G  + AR++FD 
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRM--ELQGDVTLSNVLINAYSKCGFVELARQVFDG 123

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            LER+   WNTMIG Y +N    EA+++F + +  +   F + T  S LSA     +   
Sbjct: 124 MLERSLVSWNTMIGLYTRNRMESEALDIFWE-MRNEGFKFSEFTISSVLSACGANCDALE 182

Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
            ++LH   +K  + L + V  A++                    ++  V+W++M++ +VQ
Sbjct: 183 CKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQ 242

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
           +   +E L+L    Q+     +  T+++++ A SNL     GKQ HA + + G      +
Sbjct: 243 SKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFV 302

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            S  +DMYAK G ++ +  IF  ++  +++   WN +I+G+ ++   +E  + F +M + 
Sbjct: 303 ASSAVDMYAKCGSLRESYIIF--SEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQD 360

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + PN VT +S+L  C   G +E G++        Y L  NV   + ++D+  ++G+++ 
Sbjct: 361 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 420

Query: 567 AANVFAKIP 575
           A  +   IP
Sbjct: 421 AYELIKSIP 429



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 173/347 (49%), Gaps = 33/347 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LARQ+FD +   + V WNT+I  +  N +  EA+ ++ +M+      S   +T SS
Sbjct: 112 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFS--EFTISS 169

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC    +    K +HC  ++   + + +V  +LL++Y+ C    DA           
Sbjct: 170 VLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDA----------- 218

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF++M+ ++ V W+++V+ YV+++ Y EA+  +R   RM +  +  +  +V
Sbjct: 219 -------VQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSV 271

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S+L        ++ ++ K G  + +++FVASSA+ MYA+ G    +  IF    E+
Sbjct: 272 ICACSNLAALIEGKQMHAVIRKSG--FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 329

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N E+WNT+I G+ ++  P E + LF + ++ D +  ++VTF S LS       ++ G++ 
Sbjct: 330 NIELWNTIISGFAKHARPKEVMILF-EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 388

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
              +   +   P          +VV ++ M+    + GL  E   L+
Sbjct: 389 FKLMRTTYGLSP----------NVVHYSCMVDILGRAGLLSEAYELI 425



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 228/499 (45%), Gaps = 67/499 (13%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +L+ CA    +   KA H   +R        + N L+N YS C            +V
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKC-----------GFV 114

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           E       L  +VFD M  R++V+WNT++  Y +     EA+  F  M   G + S  + 
Sbjct: 115 E-------LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTI 167

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A  +  D      ++ L +K   +   +L+V ++ + +YA+ G  + A ++F++ 
Sbjct: 168 SSVLSACGANCDALECKKLHCLSMKTSLDL--NLYVGTALLDLYAKCGMINDAVQVFESM 225

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELD 347
            ++++  W++M+ GYVQ+ +  EA+ L+   Q + L++  F   T  S + A S L  L 
Sbjct: 226 QDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQF---TLSSVICACSNLAALI 282

Query: 348 LGQQLHAYIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFV 387
            G+Q+HA I K+      FVA                 I+ + V E+++  WNT+IS F 
Sbjct: 283 EGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFA 342

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK------QTHAYLLRHG 441
           ++    E ++L  +MQ+ G   + VT ++LLS   +    + G+      +T   L  + 
Sbjct: 343 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 402

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           +H+    S ++D+  ++GL+  A ++  K+   +   + W +++A       LE A VA 
Sbjct: 403 VHY----SCMVDILGRAGLLSEAYELI-KSIPFEPTASIWGSLLASCRVCKNLELAEVAA 457

Query: 502 RQM--LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV--FVGTSLIDM 557
           +++  LE     N V ++++  A      I   ++L       L D +V    G S ID+
Sbjct: 458 KKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL-------LRDCDVKKVRGQSWIDI 510

Query: 558 YSKSGVINYAANVFAKIPE 576
             K  +     +   +I E
Sbjct: 511 KDKVHIFRVGESSHPRIRE 529



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 7/175 (4%)

Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           +L  C   G +   K  HG ++R  L  +V +   LI+ YSK G +  A  VF  + E++
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128

Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
            V++ TMI  Y ++ M   AL +F  M+  G +    T  +VLSAC   G   + L+   
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSAC---GANCDALECKK 185

Query: 639 LMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           L     K       Y   A  D+  + G + +A +  + + ++ +V   W S++ 
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSV--TWSSMVA 238


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 218/733 (29%), Positives = 364/733 (49%), Gaps = 58/733 (7%)

Query: 50  CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           C E R   A  +F S+    T  WN++I G + N L   +   + +M  S      D  +
Sbjct: 211 CGEFRS--AEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREM--SCSIFQPDEVS 266

Query: 110 YSSVLKACAETRNL-RIGKAVHCHFIRCF--SNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
            SSVL AC+   +L   G++VH   ++       S  V NSL+  YS             
Sbjct: 267 LSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYS------------- 313

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                ++   +   KVF +   RN+V+WN ++   V+ ER  EA+   R M R+  +P  
Sbjct: 314 -----EFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQM-RLENQPDV 367

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            + V +    +  G     + ++G +++ G     +  + +S + +Y +      A  +F
Sbjct: 368 ATLVTIVSGCADQGLLSEGETLHGYVIRKG-LLREEPSMGNSLLDLYLKCDEPSNAGLLF 426

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
                R+   WNTMI GY +     E  +L  + L  +       T L+ + + S  +EL
Sbjct: 427 MTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEEL 486

Query: 347 DLGQQLHAYIIK-NFVALPVIVLNAVI----------------ER-----DVVSWNTMIS 384
             G+ LH++ +K  F +  V  +NA+I                ER     D++SWNT+I 
Sbjct: 487 SFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIV 546

Query: 385 AFVQNGLDDEGLMLVYEMQ-KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
             +QN L  + L +   M        DS+T+ ++LSA  +L    +GK  H  +L+H   
Sbjct: 547 GCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFA 606

Query: 444 FE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
               +++ L+ MY + G  ++A  +F     GD +  +WN MI+G+ QN     A   ++
Sbjct: 607 SNLRVKNSLLTMYFRFGDTRSAELVFYS--MGDTNLCSWNCMISGFAQNNKGWRALQFYQ 664

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M   +  PN +++  ++ AC  +G    GK +HG   R +L  NVF+  SL+DMY K G
Sbjct: 665 KM--EDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCG 722

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A  VF    EK+   + ++I  +G HG   +++ LF  M   G++    TF+A+LS
Sbjct: 723 RLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLS 782

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           ACS++GLVDEG + + LM +++ I P+ EH+ C+ DMLGR G++ EA++FV+ L  +   
Sbjct: 783 ACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQ-QT 841

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             IWG+LL +C      ++ E +AK LL ++  NS  GY+V  +N+YA +  W  V +VR
Sbjct: 842 HGIWGALLNACSSRSELKMGESIAKHLLHLEPGNS--GYYVTAANLYAYKDMWSGVAQVR 899

Query: 743 KEMRERGLRKEVG 755
             ++++GL K  G
Sbjct: 900 SVLQDKGLVKPHG 912



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 182/671 (27%), Positives = 293/671 (43%), Gaps = 69/671 (10%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F     P  ++WN  +     +    +A  L+ +M +       D+ T   +L   +   
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARE--LGEFDSTTVVVMLSGASRAG 176

Query: 122 NLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           NLR G  +H    + C        +N+L++MY+ C     AE+                 
Sbjct: 177 NLRRGMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEV----------------- 219

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
            VF +M  R+  +WN+++S  +       +   FR M     +P  +S  +V  A S L 
Sbjct: 220 -VFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLD 278

Query: 241 D-YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           D +   + V+   VKLG E      VA+S +  Y+E G  + A+K+F + L RN   WN 
Sbjct: 279 DLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNA 338

Query: 300 MIGGYVQNNHPVEAIELFVQV-LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII- 357
           MI G VQN    EA+ +  Q+ LE    V   VT +S  +    L E   G+ LH Y+I 
Sbjct: 339 MIKGLVQNERVTEALAVLRQMRLENQPDVATLVTIVSGCADQGLLSE---GETLHGYVIR 395

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG-LDDEGL 396
           K  +     + N++++                    RD++SWNTMIS + + G L +E  
Sbjct: 396 KGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQ 455

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
           ++   +  +G      T+ A++ + S       GK  H++ L+ G    G+ +   LI M
Sbjct: 456 LMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHM 515

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEHNVTPNV 513
           Y   G    A  + E+      D  +WN +I G  QN L ++A   FR M     + P+ 
Sbjct: 516 YMSCGDPLAAFSLIERIIPVS-DIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDS 574

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +TI SVL AC  +  + LGK +H   +++L   N+ V  SL+ MY + G    A  VF  
Sbjct: 575 ITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYS 634

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + + N  ++  MI G+ Q+    RAL  ++ M+    EP+ I+ V ++ AC+  G   +G
Sbjct: 635 MGDTNLCSWNCMISGFAQNNKGWRALQFYQKME--DFEPNEISVVGIICACTQLGGYRQG 692

Query: 634 LQIF-----DLMQQEYKIQPS-TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
             I       ++     I  S  + YC      GR+   V  +E   E    G     W 
Sbjct: 693 KSIHGHVFRSVLHNNVFISASLVDMYC----KCGRLDIAVRVFEASAEKSIAG-----WN 743

Query: 688 SLLGSCRLHGH 698
           SL+ +   HGH
Sbjct: 744 SLISAFGFHGH 754


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 220/732 (30%), Positives = 378/732 (51%), Gaps = 66/732 (9%)

Query: 94  SQMKKSSPYTSC-DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY 152
           S ++ S     C D++ Y ++L+ C    +    KA+HC  ++  S    F  N LLN  
Sbjct: 35  SSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLN-- 92

Query: 153 STCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
                          YV+  + K  L   +FD M  RN V++ T+   Y   +     V 
Sbjct: 93  --------------AYVKAGFDKDAL--NLFDEMPERNNVSYVTLTQGYACQD----PVG 132

Query: 213 QFRMMLRMG--IRPSTI-SFVNVFPALSSLGDYKSADVVYGL---LVKLGSEYVNDLFVA 266
            +  + R G  + P    SF+ +F +L        A++ + L   +VKLG  Y ++ FV 
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDK------AEICWWLHSPIVKLG--YDSNAFVG 184

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ I  Y+  G  D AR +F+  L ++  VW  ++  YV+N    ++++L  + + +D  
Sbjct: 185 AALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSR-MGMDGF 243

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL-PVI------------------- 366
           + ++ TF +AL A   L      + +H  I+K    L P +                   
Sbjct: 244 MPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFK 303

Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLR 425
           V N + + DVV W+ MI+ F QNG  ++ + +   M ++GF++ +  T++++L+  +  +
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRM-REGFVVPNEFTLSSILNGCAIGK 362

Query: 426 NQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
              +G+Q H  +++ G   +  + + LID+YAK   + TA ++F +  S  ++  +WN +
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSS--KNVVSWNTV 420

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           I GY   G   +A   FR+ L + V+   VT +S L AC  + ++ELG Q+HG +I+   
Sbjct: 421 IVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNN 480

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
            + V V  SLIDMY+K G I  A  VF ++   +  ++  +I GY  HG+  +AL +F  
Sbjct: 481 AKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDI 540

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           MKG   +P+ +TF+ VLS CS AGL+D+G   F+ M  ++ I+P  EHY C+  + GR G
Sbjct: 541 MKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSG 600

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           ++ +A   ++ +  E +V+ IW ++L +     + E A   A+++L+++ ++     +VL
Sbjct: 601 QLDKAMNLIEGIPYEPSVM-IWRAMLSASMNQYNEEFARRSAEEILKINPKDEAT--YVL 657

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           LSN+YA    W NV  +RK M+E+G++KE G SWI+  G V+ F+    +HP    I  M
Sbjct: 658 LSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGM 717

Query: 785 LERLAMEMRNAG 796
           LE L M+   AG
Sbjct: 718 LEWLNMKATRAG 729



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 20/183 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LF  ++    V WNT+I+G+       +A+ ++ +  ++    S    T+SS L AC
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQ--VSVTEVTFSSALGAC 459

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   ++ +G  VH   I+  +     V NSL++MY+ C                      
Sbjct: 460 ASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKC------------------GDIK 501

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +   VF+ M   +V +WN ++S Y       +A+R F +M     +P+ ++F+ V    S
Sbjct: 502 VAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCS 561

Query: 238 SLG 240
           + G
Sbjct: 562 NAG 564


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 189/531 (35%), Positives = 313/531 (58%), Gaps = 38/531 (7%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH--- 353
           WN++I    ++    EA+  F  + +L  +     +F  A+ A S L ++  G+Q H   
Sbjct: 44  WNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 354 ---AYIIKNFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNG--LDDE 394
               Y    FV+  +IV+              + + +RD+VSW +MI  +  NG  LD  
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAV 162

Query: 395 GL---MLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-- 448
            L   +LV E      M +DS+ + +++SA S +  + + +  H+++++ G    G+   
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD-RGVSVG 221

Query: 449 SYLIDMYAKSGL--IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + L+D YAK G   +  AR+IF++    D+D+ ++N++++ Y Q+G+  EAF  FR++++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQ--IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279

Query: 507 HNV-TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           + V T N +T+++VL A +  G + +GK +H   IR  L+ +V VGTS+IDMY K G + 
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F ++  KN  ++T MI GYG HG + +AL LF +M   G+ P+ ITFV+VL+ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AGL  EG + F+ M+  + ++P  EHY C+ D+LGR G + +AY+ ++ +  + + + I
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-I 458

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W SLL +CR+H + ELAE+   +L E+D+ N   GY++LLS+IYA+ G W++V++VR  M
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNC--GYYMLLSHIYADAGRWKDVERVRMIM 516

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + RGL K  G S +++ G V+ F   D+EHPQ  KIYE L  L  ++  AG
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 229/443 (51%), Gaps = 37/443 (8%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + +V +WN++++   ++    EA+  F  M ++ + P+  SF     A SSL D  S   
Sbjct: 38  KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            +      G  Y +D+FV+S+ I MY+  G  + ARK+FD   +R+   W +MI GY  N
Sbjct: 98  THQQAFVFG--YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLN 155

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFL------SALSAVSQLQELDLGQQLHAYIIK--- 358
            + ++A+ LF  +L +DE   DD  FL      S +SA S++    L + +H+++IK   
Sbjct: 156 GNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 359 -------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                                VA+   + + ++++D VS+N+++S + Q+G+ +E   + 
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 400 YEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAK 457
             + K   +  +++T++ +L A S+     +GK  H  ++R G+  + +  + +IDMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G ++TAR+ F++    +++  +W AMIAGY  +G   +A   F  M++  V PN +T  
Sbjct: 335 CGRVETARKAFDRMK--NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392

Query: 518 SVLPACNPMG-NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           SVL AC+  G ++E  +  +    R+ ++  +     ++D+  ++G +  A ++  ++  
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452

Query: 577 K-NSVTYTTMILGYGQHGMSERA 598
           K +S+ +++++     H   E A
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELA 475



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 205/442 (46%), Gaps = 45/442 (10%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           V + DV SWN++I+   ++G   E L+    M+K        +    + A S+L +   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           KQTH      G   +  + S LI MY+  G ++ AR++F+  +   RD  +W +MI GY 
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD--EIPKRDIVSWTSMIRGYD 153

Query: 490 QNGLLEEAFVAFRQML------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
            NG   +A   F+ +L      +  +  + + + SV+ AC+ +    L + +H F I+  
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 544 LDQNVFVGTSLIDMYSKSGV--INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
            D+ V VG +L+D Y+K G   +  A  +F +I +K+ V+Y +++  Y Q GMS  A  +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 602 FRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD---LMQQEYKIQPSTEHYCCVA 657
           FR + K   +  +AIT   VL A S++G +  G  I D    M  E  +   T     + 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS----II 329

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           DM  + G+V  A +    +  +   +  W +++    +HGH+  A  +   +++   R  
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKN--VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR-- 385

Query: 718 MPGYHVLLS--------NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            P Y   +S         ++ E   W N  K R  + E GL +  GC  +D+ G      
Sbjct: 386 -PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV-EPGL-EHYGC-MVDLLGRAGFL- 440

Query: 770 SKDQEHPQSHKIYEMLERLAME 791
                     K Y++++R+ M+
Sbjct: 441 ---------QKAYDLIQRMKMK 453



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 228/506 (45%), Gaps = 65/506 (12%)

Query: 42  IRSRLSKICQEGR-----PHLARQ----LFDSITRPTTVI-WNTIIIGFVCNNLPYEAIL 91
           +RS+ +  C   R      H  RQ    LF+     T V  WN++I     +    EA+L
Sbjct: 3   VRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            +S M+K S Y +    ++   +KAC+   ++  GK  H            FV ++L+ M
Sbjct: 63  AFSSMRKLSLYPT--RSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
           YSTC    DA                   KVFD + +R++V+W +++  Y      ++AV
Sbjct: 121 YSTCGKLEDAR------------------KVFDEIPKRDIVSWTSMIRGYDLNGNALDAV 162

Query: 212 RQFRMML------RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
             F+ +L         +   ++  V+V  A S +      + ++  ++K G  +   + V
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG--FDRGVSV 220

Query: 266 ASSAIFMYAE--LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            ++ +  YA+   G    ARKIFD  ++++   +N+++  Y Q+    EA E+F ++++ 
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
             + F+ +T  + L AVS    L +G+ +H  +I+  +   VIV  ++I+          
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     ++V SW  MI+ +  +G   + L L   M   G   + +T  ++L+A S+
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400

Query: 424 LRNQDVG-KQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
                 G +  +A   R G+   G+E Y  ++D+  ++G ++ A  + ++      D   
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVE-PGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM-KPDSII 458

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLE 506
           W++++A    +  +E A ++  ++ E
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFE 484


>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 227/746 (30%), Positives = 375/746 (50%), Gaps = 99/746 (13%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  S +S   + GR   AR+LFD + +   V WN++I G++ N L  +A  L+ +M K  
Sbjct: 48  TYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKR- 106

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST-CLSSL 159
                D Y+++ ++     T   RIG+             +R ++N L +   T C ++L
Sbjct: 107 -----DIYSWTLMI-----TCYTRIGEL----------EKARELFNLLPDKQDTVCRNAL 146

Query: 160 DAEMVGLKYVEVDYSKYDL---VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
            A           Y+K  L     K+FD M  +NVV+WN+I+S Y K  +    ++ F  
Sbjct: 147 IA----------GYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEA 196

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   G R + +S+  +      +GD  SA   +    K+ +  V       S    +A  
Sbjct: 197 M---GER-NVVSWNLMVDGYVGVGDLDSA---WMFFKKIPTPNVVSWVTMLSG---FAHY 246

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV----- 331
           G    AR +F+    +N   WN MIG YV+ N   +A +LF+++ E D + +  +     
Sbjct: 247 GRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYV 306

Query: 332 ---TFLSALSAVSQLQELDLGQQ---LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
                L A   ++ +   ++  Q   ++ Y+    +     + + +  RD V WN+MI+ 
Sbjct: 307 RVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +   G  DE L L  EM  +    D V+   +++A                         
Sbjct: 367 YAHCGRTDEALRLFQEMVCK----DMVSWNTMIAA------------------------- 397

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                    YA++G +  A ++F  N+  +R+  +WN++I GY QNGL  EA   F  M 
Sbjct: 398 ---------YAQAGQMDKALEMF--NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMK 446

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +    P+  TI   L A   +  + +G QLH  +I+     ++FV  +++ MY+KSG + 
Sbjct: 447 QQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVP 506

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A NVFA+I  K+ V++ ++I GY  +G  + A+ LF  M   GI PD +TF  +LSAC+
Sbjct: 507 EAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACN 566

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           + G VD+GL +F  M + Y I+P +EHY CV ++LGRVG++ EA E V+ +    +  +I
Sbjct: 567 HGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSA-KI 625

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LL +CR+H + ELA+  A++LL ++ +N+    +VLLSN++AE G W+ V++VR  M
Sbjct: 626 WGALLWACRIHHNLELAKYSAERLLALEPQNA--SNYVLLSNMHAEAGRWDMVERVRVLM 683

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASK 771
           +E    K+ GCSWI++   ++ F SK
Sbjct: 684 KENKAEKQPGCSWIEIDNQLHCFLSK 709



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 189/426 (44%), Gaps = 70/426 (16%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF----- 317
           +F  +  I      G  + A  +F    ERN   +N+MI  Y +N     A ELF     
Sbjct: 15  VFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74

Query: 318 ---------------VQVLELDEIVFDDV------TFLSALSAVSQLQELDLGQQLH--- 353
                           +++E    +FD +      ++   ++  +++ EL+  ++L    
Sbjct: 75  RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134

Query: 354 --------------AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                          Y  K        + + ++ ++VVSWN+++S + +NG    GL   
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAK 457
             M ++  +  ++ V   +          VG    A++    I    + S+  ++  +A 
Sbjct: 195 EAMGERNVVSWNLMVDGYVG---------VGDLDSAWMFFKKIPTPNVVSWVTMLSGFAH 245

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G +  AR +F  N+   ++  +WNAMI  Y +   +++A+  F +M E +       I 
Sbjct: 246 YGRMTEARNLF--NEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMIN 303

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
                    G + +GK L    I  L+  +N+   T++I+ Y +SG ++ A  +F++I  
Sbjct: 304 ---------GYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISV 354

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++SV + +MI GY   G ++ AL LF+ M    +  D +++  +++A + AG +D+ L++
Sbjct: 355 RDSVCWNSMITGYAHCGRTDEALRLFQEM----VCKDMVSWNTMIAAYAQAGQMDKALEM 410

Query: 637 FDLMQQ 642
           F+ MQ+
Sbjct: 411 FNEMQE 416



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 14/162 (8%)

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           + ++N+    S+I  Y+K+G I  A  +F  +P++N V++ +MI GY  + + E A  LF
Sbjct: 41  MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M     + D  ++  +++  +  G +++  ++F+L+       P  +   C   ++  
Sbjct: 101 DRM----FKRDIYSWTLMITCYTRIGELEKARELFNLL-------PDKQDTVCRNALIAG 149

Query: 663 VGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRLHGHSELA 702
             K    +   K+L +E  V  +  W S+L     +G  +L 
Sbjct: 150 YAK-KRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLG 190


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/763 (27%), Positives = 380/763 (49%), Gaps = 79/763 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           +R++F+ +     V W ++++G+     P E I +Y                        
Sbjct: 228 SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------------------------ 263

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
              ++  +G+ +    ++        V NSL++M    L S+           VDY+ Y 
Sbjct: 264 ---KDESLGRQIIGQVVKSGLESKLAVENSLISM----LGSMG---------NVDYANY- 306

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M  R+ ++WN+I + Y +     E+ R F +M R     ++ +   +   L 
Sbjct: 307 ----IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLG 362

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            +   K    ++GL+VK+G + V  + V ++ + MYA  G    A  +F     ++   W
Sbjct: 363 HVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 420

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N+++  +V +   ++A+ L   ++   + V + VTF SAL+A       + G+ LH  ++
Sbjct: 421 NSLMASFVNDGRSLDALGLLCSMISSGKSV-NYVTFTSALAACFTPDFFEKGRILHGLVV 479

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
            + +    I+ NA++                     RDVV+WN +I  + ++   D+ L 
Sbjct: 480 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 539

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDV---GKQTHAYLLRHGIHF-EGMESYLID 453
               M+ +G   + +TV ++LSA   L   D+   GK  HAY++  G    E +++ LI 
Sbjct: 540 AFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 597

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G + +++ +F   D  +R+  TWNAM+A    +G  EE      +M    V+ + 
Sbjct: 598 MYAKCGDLSSSQDLFNGLD--NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQ 655

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
            + +  L A   +  +E G+QLHG +++   + + F+  +  DMYSK G I     +   
Sbjct: 656 FSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP 715

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              ++  ++  +I   G+HG  E   + F  M   GI+P  +TFV++L+ACS+ GLVD+G
Sbjct: 716 SVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKG 775

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  +D++ +++ ++P+ EH  CV D+LGR G++ EA  F+ ++  + N L +W SLL SC
Sbjct: 776 LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDL-VWRSLLASC 834

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           ++HG+ +     A+ L +++  +     +VL SN++A  G WE+V+ VRK+M  + ++K+
Sbjct: 835 KIHGNLDRGRKAAENLSKLEPEDD--SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKK 892

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ HPQ+ +IY  LE +   ++ +G
Sbjct: 893 QACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 935



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 183/712 (25%), Positives = 314/712 (44%), Gaps = 101/712 (14%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD------ 106
           GR   AR LFD +     V WNT++ G V   L  E +  + +M        CD      
Sbjct: 121 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM--------CDLGIKPS 172

Query: 107 NYTYSSVLKACAETRNL-RIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           ++  +S++ AC  + ++ R G  VH    +       +V  ++L++Y             
Sbjct: 173 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV----------- 221

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
             Y  V  S+     KVF+ M  RNVV+W +++  Y       E +  ++          
Sbjct: 222 --YGLVSCSR-----KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK---------- 264

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
                          D      + G +VK G E  + L V +S I M   +G  D+A  I
Sbjct: 265 ---------------DESLGRQIIGQVVKSGLE--SKLAVENSLISMLGSMGNVDYANYI 307

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           FD   ER+T  WN++   Y QN H  E+  +F  +    + V +  T  + LS +  +  
Sbjct: 308 FDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV-NSTTVSTLLSVLGHVDH 366

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISA 385
              G+ +H  ++K      V V N ++                     +D++SWN+++++
Sbjct: 367 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 426

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF- 444
           FV +G   + L L+  M   G  ++ VT T+ L+A       + G+  H  ++  G+ + 
Sbjct: 427 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 486

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
           + + + L+ MY K G +  +R++  +     RD   WNA+I GY ++   ++A  AF+ M
Sbjct: 487 QIIGNALVSMYGKIGEMSESRRVLLQMPR--RDVVAWNALIGGYAEDEDPDKALAAFQTM 544

Query: 505 LEHNVTPNVVTIASVLPACNPMGN-IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
               V+ N +T+ SVL AC   G+ +E GK LH + +    + +  V  SLI MY+K G 
Sbjct: 545 RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 604

Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
           ++ + ++F  +  +N +T+  M+     HG  E  L L   M+  G+  D  +F   LSA
Sbjct: 605 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 664

Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEH----YCCVADMLGRVGKVVEAYEFVKELGEE 679
            +   +++EG Q+  L      ++   EH    +   ADM  + G++ E    VK L   
Sbjct: 665 AAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMYSKCGEIGEV---VKMLPPS 716

Query: 680 GN-VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
            N  L  W  L+ +   HG+ E       ++LEM  +   PG+   +S + A
Sbjct: 717 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK---PGHVTFVSLLTA 765



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/604 (25%), Positives = 286/604 (47%), Gaps = 86/604 (14%)

Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
           G+AVH   ++     S    N+L+NMY+             K+  V  +++     +FD 
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYT-------------KFGRVKPARH-----LFDI 132

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD-YKS 244
           M  RN V+WNT++S  V+   Y+E +  FR M  +GI+PS+    ++  A    G  ++ 
Sbjct: 133 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 192

Query: 245 ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
              V+G + K G   ++D++V+++ + +Y   G    +RK+F+   +RN   W +++ GY
Sbjct: 193 GVQVHGFVAKSG--LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 250

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
                P E I+++                          ++  LG+Q+   ++K+ +   
Sbjct: 251 SDKGEPEEVIDIY--------------------------KDESLGRQIIGQVVKSGLESK 284

Query: 365 VIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
           + V N++I                    ERD +SWN++ +A+ QNG  +E   +   M++
Sbjct: 285 LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR 344

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME---SYLIDMYAKSGLI 461
               ++S TV+ LLS   ++ +Q  G+  H  +++ G  F+ +    + L+ MYA +G  
Sbjct: 345 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG--FDSVVCVCNTLLRMYAGAGRS 402

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             A  +F++  +  +D  +WN+++A +  +G   +A      M+    + N VT  S L 
Sbjct: 403 VEANLVFKQMPT--KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 460

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           AC      E G+ LHG  +   L  N  +G +L+ MY K G ++ +  V  ++P ++ V 
Sbjct: 461 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 520

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG-LVDEGLQIFDLM 640
           +  +I GY +    ++AL+ F++M+  G+  + IT V+VLSAC   G L++ G  +    
Sbjct: 521 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL---- 576

Query: 641 QQEYKIQP---STEHY-CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
              Y +     S EH    +  M  + G +  + +    L +  N++  W ++L +   H
Sbjct: 577 -HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNII-TWNAMLAANAHH 633

Query: 697 GHSE 700
           GH E
Sbjct: 634 GHGE 637



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 286/608 (47%), Gaps = 52/608 (8%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S +   G    A  +FD ++   T+ WN+I   +  N    E+  ++S M++   + 
Sbjct: 290 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF--HD 347

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             ++ T S++L       + + G+ +H   ++   +    V N+LL MY+    S++A +
Sbjct: 348 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                             VF  M  +++++WN++++ +V   R ++A+     M+  G  
Sbjct: 408 ------------------VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 449

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
            + ++F +   A  +   ++   +++GL+V  G  Y  +  + ++ + MY ++G    +R
Sbjct: 450 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY--NQIIGNALVSMYGKIGEMSESR 507

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           ++      R+   WN +IGGY ++  P +A+  F Q + ++ +  + +T +S LSA    
Sbjct: 508 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF-QTMRVEGVSSNYITVVSVLSACLLP 566

Query: 344 QE-LDLGQQLHAYIIK------NFVALPVIVL--------------NAVIERDVVSWNTM 382
            + L+ G+ LHAYI+         V   +I +              N +  R++++WN M
Sbjct: 567 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAM 626

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           ++A   +G  +E L LV +M+  G  +D  + +  LSAA+ L   + G+Q H   ++ G 
Sbjct: 627 LAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGF 686

Query: 443 -HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
            H   + +   DMY+K G I    ++     S +R   +WN +I+   ++G  EE    F
Sbjct: 687 EHDSFIFNAAADMYSKCGEIGEVVKMLPP--SVNRSLPSWNILISALGRHGYFEEVCATF 744

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSK 560
            +MLE  + P  VT  S+L AC+  G ++ G   +    R + L+  +     +ID+  +
Sbjct: 745 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGR 804

Query: 561 SGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           SG +  A    +K+P K N + + +++     HG  +R      ++     E D+   V 
Sbjct: 805 SGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDS---VY 861

Query: 620 VLSACSYA 627
           VLS+  +A
Sbjct: 862 VLSSNMFA 869



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 123/237 (51%), Gaps = 14/237 (5%)

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMES-YLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           S +  +  G+  HA  ++  +    + +  LI+MY K G +K AR +F+      R++ +
Sbjct: 83  SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPV--RNEVS 140

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQLHGFS 539
           WN M++G  + GL  E    FR+M +  + P+   IAS++ AC   G++   G Q+HGF 
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            +  L  +V+V T+++ +Y   G+++ +  VF ++P++N V++T++++GY   G  E  +
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260

Query: 600 ------SLFRSMKG----CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
                 SL R + G     G+E       +++S     G VD    IFD M +   I
Sbjct: 261 DIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 317



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 172/394 (43%), Gaps = 73/394 (18%)

Query: 328 FDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------------- 373
           FD + F       SQ+     G+ +HA  +K  V L V+  N +I               
Sbjct: 77  FDQIGF-------SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHL 129

Query: 374 ------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA----ASN 423
                 R+ VSWNTM+S  V+ GL  EG+    +M   G    S  + +L++A     S 
Sbjct: 130 FDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM 189

Query: 424 LRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
            R    G Q H ++ + G+  +  + + ++ +Y   GL+  +R++FE  +  DR+  +W 
Sbjct: 190 FRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE--EMPDRNVVSWT 244

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           +++ GY+  G  EE    ++                         +  LG+Q+ G  ++ 
Sbjct: 245 SLMVGYSDKGEPEEVIDIYK-------------------------DESLGRQIIGQVVKS 279

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            L+  + V  SLI M    G ++YA  +F ++ E++++++ ++   Y Q+G  E +  +F
Sbjct: 280 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 339

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M+    E ++ T   +LS   +      G  I  L+     ++   +   CV + L R
Sbjct: 340 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSVVCVCNTLLR 394

Query: 663 V----GKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           +    G+ VEA    K++  +   L  W SL+ S
Sbjct: 395 MYAGAGRSVEANLVFKQMPTKD--LISWNSLMAS 426


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 210/712 (29%), Positives = 346/712 (48%), Gaps = 82/712 (11%)

Query: 107 NYTYSSVLKAC---AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
           NY YS  +K C         R  K +H + IR    P  F+YN++++ Y+   SS  A  
Sbjct: 4   NY-YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR 62

Query: 164 V----------GLKYVEVDYSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEA 210
           V              + + YSK  L+ ++   F+ +  R+ V WN ++  Y  +     A
Sbjct: 63  VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122

Query: 211 VRQFRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           V+ +  M+R      + ++ + +    SS G       ++G ++KLG E  + L V S  
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE--SYLLVGSPL 180

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           ++MYA +GC   A+K+F    +RNT ++N+                              
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNTVMYNS------------------------------ 210

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
               +  L A   +++                    + L   +E+D VSW  MI    QN
Sbjct: 211 ---LMGGLLACGMIED-------------------ALQLFRGMEKDSVSWAAMIKGLAQN 248

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--- 446
           GL  E +    EM+ QG  +D     ++L A   L   + GKQ HA ++R   +F+    
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR--TNFQDHIY 306

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + S LIDMY K   +  A+ +F++     ++  +W AM+ GY Q G  EEA   F  M  
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMK--QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             + P+  T+   + AC  + ++E G Q HG +I   L   V V  SL+ +Y K G I+ 
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           +  +F ++  +++V++T M+  Y Q G +   + LF  M   G++PD +T   V+SACS 
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLV++G + F LM  EY I PS  HY C+ D+  R G++ EA  F+  +    + +  W
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG-W 543

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
            +LL +CR  G+ E+ +  A+ L+E+D  +  P  + LLS+IYA +G W++V ++R+ MR
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHH--PAGYTLLSSIYASKGKWDSVAQLRRGMR 601

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           E+ ++KE G SWI   G ++ F++ D+  P   +IY  LE L  ++ + G K
Sbjct: 602 EKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYK 653



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 235/551 (42%), Gaps = 75/551 (13%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           F+ +     V WN +I G+  + L   A+  Y+ M +     +    T  ++LK  +   
Sbjct: 95  FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS-ANLTRVTLMTMLKLSSSNG 153

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD---- 177
           ++ +GK +H   I+        V + LL MY+      DA+ V     + +   Y+    
Sbjct: 154 HVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMG 213

Query: 178 --LVC-------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
             L C       ++F  M + + V+W  ++    +     EA+  FR M   G++     
Sbjct: 214 GLLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP 272

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F +V PA   LG       ++  +++  + + + ++V S+ I MY +  C  +A+ +FD 
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIR--TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ++N   W  M+ GY Q     EA+++F+  ++   I  D  T   A+SA + +  L+ 
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLD-MQRSGIDPDHYTLGQAISACANVSSLEE 389

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ 388
           G Q H   I + +   V V N+++                     RD VSW  M+SA+ Q
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ 449

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
            G   E + L  +M + G   D VT+T ++SA S                R G+  +G +
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS----------------RAGLVEKG-Q 492

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
            Y   M ++ G++ +                 ++ MI  ++++G LEEA      M    
Sbjct: 493 RYFKLMTSEYGIVPSI--------------GHYSCMIDLFSRSGRLEEAMRFINGM---P 535

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI-DMYSKSGVINYA 567
             P+ +   ++L AC   GN+E+GK      I   LD +   G +L+  +Y+  G  +  
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDSV 593

Query: 568 ANVFAKIPEKN 578
           A +   + EKN
Sbjct: 594 AQLRRGMREKN 604



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 23/204 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H A+ +FD + +   V W  +++G+       EA+ ++  M++S      D+YT    + 
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG--IDPDHYTLGQAIS 379

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA   +L  G   H   I         V NSL+ +Y  C                    
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC------------------GD 421

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            D   ++F+ M  R+ V+W  +VS Y +  R VE ++ F  M++ G++P  ++   V  A
Sbjct: 422 IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481

Query: 236 LSSLGDYKSADVVYGLLVKLGSEY 259
            S  G  +     + L+    SEY
Sbjct: 482 CSRAGLVEKGQRYFKLMT---SEY 502


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/530 (34%), Positives = 303/530 (57%), Gaps = 33/530 (6%)

Query: 293 NTEVWNTMIGGYVQ--NNHPVEAIELFVQVLELDEIVFDDVTF---------LSALSAVS 341
           N   +N MI       +N+P+ A+ LF +++ L  +  D+ TF         L++LS   
Sbjct: 85  NDYAFNIMIRALTTTWHNYPL-ALSLFHRMMSL-SLTPDNFTFPFFFLSCANLASLSHAC 142

Query: 342 QLQELDLGQQLH-----------AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
               L     LH           AY     VA    V + +  RD VSWN+MI+ + + G
Sbjct: 143 AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202

Query: 391 LDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
              E + +  EM ++ GF  D +++ +LL A   L + ++G+    +++  G+     + 
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           S LI MYAK G +++AR+IF+   +  RD  TWNA+I+GY QNG+ +EA + F  M E  
Sbjct: 263 SALISMYAKCGELESARRIFDGMAA--RDVITWNAVISGYAQNGMADEAILLFHGMKEDC 320

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           VT N +T+ +VL AC  +G ++LGKQ+  ++ +     ++FV T+LIDMY+KSG ++ A 
Sbjct: 321 VTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQ 380

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM--KGCGIEPDAITFVAVLSACSY 626
            VF  +P+KN  ++  MI     HG ++ ALSLF+ M  +G G  P+ ITFV +LSAC +
Sbjct: 381 RVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVH 440

Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
           AGLVDEG ++FD+M   + + P  EHY C+ D+L R G + EA++ ++++ E+ + + + 
Sbjct: 441 AGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTL- 499

Query: 687 GSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMR 746
           G+LLG+CR   + ++ E V + +LE+D  NS  G +++ S IYA    WE+  ++R  MR
Sbjct: 500 GALLGACRSKKNVDIGERVMRMILEVDPSNS--GNYIISSKIYANLNMWEDSARMRLLMR 557

Query: 747 ERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           ++G+ K  GCSWI+V  +++ F + D     S  +  +++ L  E++  G
Sbjct: 558 QKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKREG 607



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 231/485 (47%), Gaps = 66/485 (13%)

Query: 190 NVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
           N  A+N ++     T   Y  A+  F  M+ + + P   +F   F + ++L     A   
Sbjct: 85  NDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAA 144

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           + LL KL     +D   A S I  YA  G    ARK+FD    R++  WN+MI GY +  
Sbjct: 145 HSLLFKLALH--SDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              EA+E+F ++   D    D+++ +S L A  +L +L+LG+ +  ++++  + L   + 
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262

Query: 369 NAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A+I                     RDV++WN +IS + QNG+ DE ++L + M++    
Sbjct: 263 SALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVT 322

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQI 467
            + +T+TA+LSA + +   D+GKQ   Y  + G  H   + + LIDMYAKSG +  A+++
Sbjct: 323 ANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRV 382

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH--NVTPNVVTIASVLPACNP 525
           F+  D   +++A+WNAMI+    +G  +EA   F+ M +      PN +T   +L AC  
Sbjct: 383 FK--DMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVH 440

Query: 526 MGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            G ++ G +L    S  + L   +   + ++D+ +++G +  A ++  K+PEK       
Sbjct: 441 AGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEK------- 493

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
                                      PD +T  A+L AC     VD G ++   M+   
Sbjct: 494 ---------------------------PDKVTLGALLGACRSKKNVDIGERV---MRMIL 523

Query: 645 KIQPS 649
           ++ PS
Sbjct: 524 EVDPS 528



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 218/534 (40%), Gaps = 94/534 (17%)

Query: 25  PQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           P  H LS  I     P      S I     PH     F+ + R  T  W+         N
Sbjct: 56  PNNHLLSKAIHLKNFPYSSLLFSHIA----PHPNDYAFNIMIRALTTTWH---------N 102

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
            P    L +  M  S    + DN+T+     +CA   +L    A H    +   +     
Sbjct: 103 YPLALSLFHRMMSLS---LTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHT 159

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            +SL+  Y+ C     A                   KVFD +  R+ V+WN++++ Y K 
Sbjct: 160 AHSLITAYARCGLVASAR------------------KVFDEIPHRDSVSWNSMIAGYAKA 201

Query: 205 ERYVEAVRQFRMMLRM-GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
               EAV  FR M R  G  P  +S V++  A   LGD +    V G +V+ G     + 
Sbjct: 202 GCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTL--NS 259

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           ++ S+ I MYA+ G  + AR+IFD    R+   WN +I GY QN    EAI LF  + E 
Sbjct: 260 YIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKE- 318

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI----------- 366
           D +  + +T  + LSA + +  LDLG+Q+  Y  +       FVA  +I           
Sbjct: 319 DCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDN 378

Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAA 421
              V   + +++  SWN MISA   +G   E L L   M  +G     + +T   LLSA 
Sbjct: 379 AQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSAC 438

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
                       HA L+  G     M S L       GL+                   +
Sbjct: 439 -----------VHAGLVDEGYRLFDMMSTLF------GLVPKIEH--------------Y 467

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
           + M+    + G L EA+   R+M E    P+ VT+ ++L AC    N+++G+++
Sbjct: 468 SCMVDLLARAGHLYEAWDLIRKMPE---KPDKVTLGALLGACRSKKNVDIGERV 518


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 208/729 (28%), Positives = 361/729 (49%), Gaps = 61/729 (8%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           L++ I     V WN+I+ G + N  P +A+  + +M  S    + DN +    + A +  
Sbjct: 249 LYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEE--TADNVSLCCAISASSSL 306

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
             L  G++VH   I+        V NSL+++YS C     AE                  
Sbjct: 307 GELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAE------------------ 348

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPALSSL 239
            +F  +  +++V+WN ++  +    +  E       M ++G  +P  ++ + + P  + L
Sbjct: 349 TLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAEL 408

Query: 240 GDYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
              +    ++G  ++   + ++D + + +S I MY++    + A  +F++  E++T  WN
Sbjct: 409 MLSREGRTIHGYAIR--RQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWN 466

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ--ELDLGQQLHAYI 356
            MI GY  N +  EA  LF ++L           F + LS+ + L    +  G+ +H + 
Sbjct: 467 AMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVF-AILSSCNSLNINSIHFGKSVHCWQ 525

Query: 357 IKNFVALPVIVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEG 395
           +K+     ++++N ++                       D+ SWNT+I   V+     E 
Sbjct: 526 LKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREA 585

Query: 396 LMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLID 453
           L     M Q+     DS+T+ + LSA +NL   ++GK  H   ++  +  +  +++ LI 
Sbjct: 586 LETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLIT 645

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY +   I +A+ +F+   + +    +WN MI+  + N    EA   F   L     PN 
Sbjct: 646 MYDRCRDINSAKVVFKFFSTPNL--CSWNCMISALSHNRESREALELF---LNLQFEPNE 700

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           +TI  VL AC  +G +  GKQ+H    R  +  N F+  +LID+YS  G ++ A  VF  
Sbjct: 701 ITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRH 760

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
             EK+   + +MI  YG HG  E+A+ LF  M   G      TFV++LSACS++GLV++G
Sbjct: 761 AKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQG 820

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           L  ++ M + Y +QP TEH   V DMLGR G++ EAYEF K     G    +WG+LL +C
Sbjct: 821 LWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAKGCDSSG----VWGALLSAC 876

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
             HG  +L + +A+ L +++ +N   G+++ LSN+Y   G+W++  ++R+ +++ GLRK 
Sbjct: 877 NYHGELKLGKKIAQYLFQLEPQN--VGHYISLSNMYVAAGSWKDATELRQSIQDLGLRKT 934

Query: 754 VGCSWIDVG 762
            G S +DVG
Sbjct: 935 AGYSLVDVG 943



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 198/743 (26%), Positives = 326/743 (43%), Gaps = 66/743 (8%)

Query: 12  PPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTV 71
           P   TAT       +I +L+        PT  S L+   + G    ++ LFD I     +
Sbjct: 105 PKIVTATVAHCAALKIGALA------HLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAI 158

Query: 72  IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
            WN I+   + N     A+  + +M K+   T  D+ T   ++ A    +N   G+A+HC
Sbjct: 159 AWNAIVAASLENKCYRIAMDFFDKMIKAQ--TGFDSTTLLLIVSASLHMKNFDQGRAIHC 216

Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
             I+        + N+L++MY+ C     +E +   Y E++       CK        + 
Sbjct: 217 VSIKSGMLVDISLGNALVDMYAKCGDLSSSECL---YEEIE-------CK--------DA 258

Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
           V+WN+I+   +      +A+  F+ M         +S      A SSLG+      V+GL
Sbjct: 259 VSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGL 318

Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            +KLG  Y + + VA+S I +Y++      A  +F     ++   WN M+ G+  N    
Sbjct: 319 GIKLG--YKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIK 376

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------------- 358
           E  +L VQ+ ++     D VT ++ L   ++L     G+ +H Y I+             
Sbjct: 377 EVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNS 436

Query: 359 --------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
                   N V    ++ N+  E+D VSWN MIS +  N   +E   L  EM + G    
Sbjct: 437 LIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCS 496

Query: 411 SVTVTALLSAASNLRNQDV--GKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQI 467
           S TV A+LS+ ++L    +  GK  H + L+ G ++   + + L+ MY   G +  +  I
Sbjct: 497 SSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSI 556

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVTIASVLPACNPM 526
             +N S   D A+WN +I G  +     EA   F  M  E  +  + +T+ S L AC  +
Sbjct: 557 LHEN-SALADIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANL 615

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
               LGK LHG +++  L  +  V  SLI MY +   IN A  VF      N  ++  MI
Sbjct: 616 ELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMI 675

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
                +  S  AL LF +++    EP+ IT + VLSAC+  G++  G Q+   + +   I
Sbjct: 676 SALSHNRESREALELFLNLQ---FEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTC-I 731

Query: 647 QPSTEHYCCVADM---LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Q ++     + D+    GR+   ++ +   KE  E       W S++ +   HG  E A 
Sbjct: 732 QDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESA-----WNSMISAYGYHGKGEKAI 786

Query: 704 VVAKKLLEMDTRNSMPGYHVLLS 726
            +  ++ E   R S   +  LLS
Sbjct: 787 KLFHEMCESGARVSKSTFVSLLS 809



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 174/650 (26%), Positives = 284/650 (43%), Gaps = 93/650 (14%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  LF  I     V WN ++ GF  N    E   L  QM+K   +   D  T  ++L  C
Sbjct: 347 AETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQP-DIVTLITLLPLC 405

Query: 118 AETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           AE    R G+ +H + I R   +    + NSL+ MYS C     AE+             
Sbjct: 406 AELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAEL------------- 452

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +F++   ++ V+WN ++S Y       EA   F  MLR G   S+ +   VF  L
Sbjct: 453 -----LFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSST---VFAIL 504

Query: 237 SSLGDYKSADVVYGLLV---KLGSEYVNDLFVASSAIFMYAELGCFDFARKIF-DNCLER 292
           SS        + +G  V   +L S ++N + + +  + MY   G    +  I  +N    
Sbjct: 505 SSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALA 564

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WNT+I G V+ +H  EA+E F  + +   + +D +T +SALSA + L+  +LG+ L
Sbjct: 565 DIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSL 624

Query: 353 HAYIIKNFVALPVIVLNAVIE-----RDV---------------VSWNTMISAFVQNGLD 392
           H   +K+ +     V N++I      RD+                SWN MISA   N   
Sbjct: 625 HGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRES 684

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
            E L L   +Q   F  + +T+  +LSA + +     GKQ HA++ R  I     + + L
Sbjct: 685 REALELFLNLQ---FEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAAL 741

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           ID+Y+  G + TA Q+F    + ++ ++ WN+MI+ Y  +G  E+A   F +M E     
Sbjct: 742 IDLYSNCGRLDTALQVFRH--AKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARV 799

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T  S+L AC+  G               L++Q ++    +++ Y             
Sbjct: 800 SKSTFVSLLSACSHSG---------------LVNQGLWFYECMLERYGVQ---------- 834

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
              PE     Y   +L     G S R    +   KGC     +  + A+LSAC+Y G + 
Sbjct: 835 ---PETEHQVYVVDML-----GRSGRLDEAYEFAKGC---DSSGVWGALLSACNYHGELK 883

Query: 632 EGLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            G +I    Q  ++++P +  HY  +++M    G   +A E  + + + G
Sbjct: 884 LGKKI---AQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQSIQDLG 930


>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1251

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 202/630 (32%), Positives = 330/630 (52%), Gaps = 34/630 (5%)

Query: 190  NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
            +V AWN  V   V     VE++  FR M R G  P+  +F  V  A + L      ++V+
Sbjct: 612  SVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVH 671

Query: 250  GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
              L+K  S + +D+FV ++ + M+ +    D+A K+F+    R+   WN M+ G+ Q+ H
Sbjct: 672  THLIK--SPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGH 729

Query: 310  PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
              +   LF + + LDEI  D VT ++ + + S  + L L + +HA+ I+  V L   V N
Sbjct: 730  TDKVFSLFRE-MRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSN 788

Query: 370  AVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
              I                      +R VVSWN++  AF   G   +       M +  F
Sbjct: 789  TWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEF 848

Query: 408  MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTAR 465
              D  T   L ++  N +    G+  H++ +  G     E + ++ I MY+KSG   +AR
Sbjct: 849  KPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTF-ISMYSKSGDSCSAR 907

Query: 466  QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
             +F+   S  R   +W  MI+GY + G ++EA   F  M +  V P++VT+ S++  C  
Sbjct: 908  LLFDIMPS--RTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGK 965

Query: 526  MGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
             G++E+GK + G +  Y   + NV V  +LIDMYSK G I+ A ++F    EK  VT+TT
Sbjct: 966  FGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTT 1025

Query: 585  MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
            MI GY  +G+   A+ LF  M     +P+ ITF+AVL AC+++G +++G + F +M+Q Y
Sbjct: 1026 MIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 1085

Query: 645  KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
             I P  +HY C+ D+LGR GK+ EA E +  +  + +   IWG+LL +C++H + ++AE 
Sbjct: 1086 NISPGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDA-GIWGALLSACKIHRNVKIAEQ 1144

Query: 705  VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
             A  L  ++ + + P  +V +SNIYA  G W+   ++R  M+   ++K  G S I V G 
Sbjct: 1145 AADSLFNLEPQMAAP--YVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGK 1202

Query: 765  VNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
             + F   ++ H ++  IY  L  L++  R+
Sbjct: 1203 NHTFTVGERGHMENEAIYSTLNGLSLFARD 1232



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/576 (25%), Positives = 251/576 (43%), Gaps = 82/576 (14%)

Query: 73   WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
            WN  +   V  N P E++LL+ +MK+       +N+T+  V KACA    +   + VH H
Sbjct: 616  WNFQVREAVNRNDPVESLLLFREMKRGG--FEPNNFTFPFVAKACARLAYIGYCEMVHTH 673

Query: 133  FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
             I+       FV  + ++M+  C S                   D   KVF+ M  R+  
Sbjct: 674  LIKSPFWSDVFVGTATVDMFVKCDS------------------LDYAAKVFERMPVRDAT 715

Query: 193  AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
             WN ++S + ++    +    FR M    I P +++ + +  + S     K   V++   
Sbjct: 716  TWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFG 775

Query: 253  VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NCLERNTEVWNTMIGGYVQNNHP 310
            ++LG +      V+++ I  Y + G  D A+ +F+  +  +R    WN++   +      
Sbjct: 776  IRLGVDL--QATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEA 833

Query: 311  VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNA 370
             +A   +  +L  DE   D  TF++  ++    Q L  G+ +H++ I       +  +N 
Sbjct: 834  FDAFGHYRLMLR-DEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINT 892

Query: 371  VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
             I                     R  VSW  MIS + + G  DE L L + M K G   D
Sbjct: 893  FISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPD 952

Query: 411  SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIF 468
             VT+ +L+S      + ++GK        +G   + +   + LIDMY+K G I  AR IF
Sbjct: 953  LVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIF 1012

Query: 469  EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
              +++ ++   TW  MIAGY  NG+  EA   F +M++ +  PN +T  +VL AC   G+
Sbjct: 1013 --DNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGS 1070

Query: 529  IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
            +E      G+   +++ Q          +Y+ S  +++               Y+ M+  
Sbjct: 1071 LE-----KGWEYFHIMKQ----------VYNISPGLDH---------------YSCMVDL 1100

Query: 589  YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
             G+ G  + AL L  +M     +PDA  + A+LSAC
Sbjct: 1101 LGRKGKLDEALELIHNMSA---KPDAGIWGALLSAC 1133



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 23/202 (11%)

Query: 41   TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
             I + +S   + G    AR LFD +   T V W  +I G+       EA+ L+  M K+ 
Sbjct: 889  AINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTG 948

Query: 101  PYTSCDNYTYSSVLKACAETRNLRIGKAV--HCHFIRCFSNPSRFVYNSLLNMYSTCLSS 158
               + D  T  S++  C +  +L IGK +        C  + +  V N+L++MYS C S 
Sbjct: 949  --VNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKD-NVMVCNALIDMYSKCGS- 1004

Query: 159  LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
                              D    +FD    + +V W T+++ Y     ++EA+  F  M+
Sbjct: 1005 -----------------IDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMI 1047

Query: 219  RMGIRPSTISFVNVFPALSSLG 240
             +  +P+ I+F+ V  A +  G
Sbjct: 1048 DLDYKPNHITFLAVLQACAHSG 1069


>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 227/746 (30%), Positives = 375/746 (50%), Gaps = 99/746 (13%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  S +S   + GR   AR+LFD + +   V WN++I G++ N L  +A  L+ +M K  
Sbjct: 48  TYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKR- 106

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST-CLSSL 159
                D Y+++ ++     T   RIG+             +R ++N L +   T C ++L
Sbjct: 107 -----DIYSWTLMI-----TCYTRIGEL----------EKARELFNLLPDKQDTVCRNAL 146

Query: 160 DAEMVGLKYVEVDYSKYDL---VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
            A           Y+K  L     K+FD M  +NVV+WN+I+S Y K  +    ++ F  
Sbjct: 147 IA----------GYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEA 196

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M   G R + +S+  +      +GD  SA   +    K+ +  V       S    +A  
Sbjct: 197 M---GER-NVVSWNLMVDGYVGVGDLDSA---WMFFKKIPTPNVVSWVTMLSG---FAHY 246

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV----- 331
           G    AR +F+    +N   WN MIG YV+ N   +A +LF+++ E D + +  +     
Sbjct: 247 GRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYV 306

Query: 332 ---TFLSALSAVSQLQELDLGQQ---LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISA 385
                L A   ++ +   ++  Q   ++ Y+    +     + + +  RD V WN+MI+ 
Sbjct: 307 RVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITG 366

Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
           +   G  DE L L  EM  +    D V+   +++A                         
Sbjct: 367 YAHCGRTDEALRLFQEMVCK----DMVSWNTMIAA------------------------- 397

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
                    YA++G +  A ++F  N+  +R+  +WN++I GY QNGL  EA   F  M 
Sbjct: 398 ---------YAQAGQMDKALEMF--NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMK 446

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           +    P+  TI   L A   +  + +G QLH  +I+     ++FV  +++ MY+KSG + 
Sbjct: 447 QQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVP 506

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A NVFA+I  K+ V++ ++I GY  +G  + A+ LF  M   GI PD +TF  +LSAC+
Sbjct: 507 EAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACN 566

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           + G VD+GL +F  M + Y I+P +EHY CV ++LGRVG++ EA E V+ +    +  +I
Sbjct: 567 HGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSA-KI 625

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           WG+LL +CR+H + ELA+  A++LL ++ +N+    +VLLSN++AE G W+ V++VR  M
Sbjct: 626 WGALLWACRIHHNLELAKYSAERLLALEPQNA--SNYVLLSNMHAEAGRWDMVERVRVLM 683

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASK 771
           +E    K+ GCSWI++   ++ F SK
Sbjct: 684 KENKAEKQPGCSWIEIDNQLHCFLSK 709



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 189/426 (44%), Gaps = 70/426 (16%)

Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF----- 317
           +F  +  I      G  + A  +F    ERN   +N+MI  Y +N     A ELF     
Sbjct: 15  VFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQ 74

Query: 318 ---------------VQVLELDEIVFDDV------TFLSALSAVSQLQELDLGQQLH--- 353
                           +++E    +FD +      ++   ++  +++ EL+  ++L    
Sbjct: 75  RNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLL 134

Query: 354 --------------AYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                          Y  K        + + ++ ++VVSWN+++S + +NG    GL   
Sbjct: 135 PDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFF 194

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAK 457
             M ++  +  ++ V   +          VG    A++    I    + S+  ++  +A 
Sbjct: 195 EAMGERNVVSWNLMVDGYVG---------VGDLDSAWMFFKKIPTPNVVSWVTMLSGFAH 245

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G +  AR +F  N+   ++  +WNAMI  Y +   +++A+  F +M E +       I 
Sbjct: 246 YGRMTEARNLF--NEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMIN 303

Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
                    G + +GK L    I  L+  +N+   T++I+ Y +SG ++ A  +F++I  
Sbjct: 304 ---------GYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISV 354

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           ++SV + +MI GY   G ++ AL LF+ M    +  D +++  +++A + AG +D+ L++
Sbjct: 355 RDSVCWNSMITGYAHCGRTDEALRLFQEM----VCKDMVSWNTMIAAYAQAGQMDKALEM 410

Query: 637 FDLMQQ 642
           F+ MQ+
Sbjct: 411 FNEMQE 416



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 14/162 (8%)

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           + ++N+    S+I  Y+K+G I  A  +F  +P++N V++ +MI GY  + + E A  LF
Sbjct: 41  MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             M     + D  ++  +++  +  G +++  ++F+L+       P  +   C   ++  
Sbjct: 101 DRM----FKRDIYSWTLMITCYTRIGELEKARELFNLL-------PDKQDTVCRNALIAG 149

Query: 663 VGKVVEAYEFVKELGEEGNVLEI--WGSLLGSCRLHGHSELA 702
             K    +   K+L +E  V  +  W S+L     +G  +L 
Sbjct: 150 YAK-KRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLG 190


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 183/560 (32%), Positives = 306/560 (54%), Gaps = 32/560 (5%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           ++F  ++ I  YA+      A  +FD   + +   +NT+I  Y      + A+ LF ++ 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 322 ELDEIVFDDVTFLSALSA-------VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE- 373
           E+  +V D  TF   ++A       + QL  L       +Y+      L     N ++E 
Sbjct: 133 EMG-LVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEE 191

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       RD VSWN+MI A+ Q+    + L L  +M  +GF ID  T+ ++L+  
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTF 251

Query: 422 SNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYAKSGL-IKTARQIFEKNDSGDRDQA 479
           S + +   G Q HA  ++ G +    + S LIDMYAK G  +  +R++FE  +    D  
Sbjct: 252 SCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFE--EICGSDLV 309

Query: 480 TWNAMIAGYTQNGLLE-EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
            WN MI+GY+QN  L  EA   FRQM      P+  +    + AC+ + +   GKQ H  
Sbjct: 310 VWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369

Query: 539 SIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSER 597
           +++  +  N + V  +L+ MYSK G +  A  +F ++P+ N+VT  ++I GY QHG+   
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTE 429

Query: 598 ALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA 657
           +L+LF  M    I P +IT V++LSAC++ G V+EG + F++M+  + I+P  EHY C+ 
Sbjct: 430 SLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMI 489

Query: 658 DMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
           D+LGR GK+ EA   +  +    G+    W +LLG+CR +G+ ELAE  A + L+++  N
Sbjct: 490 DLLGRAGKLSEAERLIDTMPFSPGSA--AWAALLGACRKYGNMELAEKAANQFLQLEPTN 547

Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
           ++P  +++L+++Y+    WE   ++RK MR+RG+RK+ GCSWI++   V+ F ++D  HP
Sbjct: 548 AVP--YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHP 605

Query: 777 QSHKIYEMLERLAMEMRNAG 796
           +  +I+  L+ + ++M+ AG
Sbjct: 606 RIKEIHMYLDEMFVKMKRAG 625



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 267/583 (45%), Gaps = 67/583 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC----------LSS 158
           ++  +LK+C   ++L  GK++H  +++     S ++ N  + +YS C            +
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 159 LDAEMVGLKYVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
            +  +     +   Y+K  L+     +FD + + ++V++NT+++ Y      + A+  F 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF-----VASSAI 270
            M  MG+     +F  V  A  +           GL+ +L S   +  F     V +S +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNH---------VGLIRQLHSLAFSSGFDSYVSVKNSLL 180

Query: 271 FMYAELGCFDFARKIFDNCLE--RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
             Y++ G  + A  +F+   E  R+   WN+MI  Y Q+   ++A+ L+  ++       
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRG-FEI 239

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI---------------V 367
           D  T  S L+  S +++L  G Q HA  IK        V   +I               V
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299

Query: 368 LNAVIERDVVSWNTMISAFVQNG-LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
              +   D+V WNTMIS + QN  L  E L    +MQ+ G+  D  +    +SA SNL +
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSS 359

Query: 427 QDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
              GKQ HA  ++  I      + + L+ MY+K G ++ AR++F++      +  T N++
Sbjct: 360 PSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP--QHNTVTLNSI 417

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYL 543
           IAGY Q+G+  E+   F QML  ++ P  +T+ S+L AC   G +E GK+  +     + 
Sbjct: 418 IAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFG 477

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG----YGQHGMSERAL 599
           ++      + +ID+  ++G ++ A  +   +P          +LG    YG   ++E+A 
Sbjct: 478 IEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAA 537

Query: 600 SLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           + F  +     EP +A+ ++ + S  S A   +E  +I  LM+
Sbjct: 538 NQFLQL-----EPTNAVPYIMLASMYSAARKWEEAARIRKLMR 575



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 222/504 (44%), Gaps = 61/504 (12%)

Query: 51  QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           +E   H+A  LFD I +P  V +NT+I  +        A+ L+ +M++       D +T+
Sbjct: 86  KESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVM--DGFTF 143

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF--VYNSLLNMYSTCLSSLDAEMVGLKY 168
           S V+ AC       +G     H +   S    +  V NSLL  YS      +AEM     
Sbjct: 144 SGVITACCN----HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEM----- 194

Query: 169 VEVDYSKYDLVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
                        VF+ M    R+ V+WN+++  Y + +R ++A+  +R M+  G     
Sbjct: 195 -------------VFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDM 241

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-FDFARKI 285
            +  +V    S + D       +   +K G  +  +  V S  I MYA+ G     +RK+
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTG--FNKNRHVGSGLIDMYAKCGAGMSESRKV 299

Query: 286 FDNCLERNTEVWNTMIGGYVQNNH-PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           F+     +  VWNTMI GY QN    VEA+E F Q ++      DD +F+ A+SA S L 
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELSVEALECFRQ-MQRAGYWPDDCSFVCAISACSNLS 358

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMI 383
               G+Q HA  +K+ +    I +N  +                     + + V+ N++I
Sbjct: 359 SPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSII 418

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGI 442
           + + Q+G+  E L L  +M        S+T+ ++LSA ++    + GK+    +    GI
Sbjct: 419 AGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGI 478

Query: 443 HFEGME-SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG---LLEEAF 498
             E    S +ID+  ++G +  A ++ +         A W A++    + G   L E+A 
Sbjct: 479 EPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSP-GSAAWAALLGACRKYGNMELAEKAA 537

Query: 499 VAFRQMLEHNVTPNVVTIASVLPA 522
             F Q+   N  P ++ +AS+  A
Sbjct: 538 NQFLQLEPTNAVPYIM-LASMYSA 560


>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 215/759 (28%), Positives = 375/759 (49%), Gaps = 82/759 (10%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           +A+ LF  +       W   IIG  C   L   A+L + +M ++      DNY   +V K
Sbjct: 103 VAQDLFSRLRVRNVFSW-AAIIGLKCRIGLCEGALLGFVEMLENGVLP--DNYVVPNVCK 159

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC        G+ VH + ++   +   FV +SL +MY  C    DA MV           
Sbjct: 160 ACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVLDDARMV----------- 208

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                  FD +  RNVVAWN ++  YV+     EA+R    M + GI P+ ++      A
Sbjct: 209 -------FDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSA 261

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +++G  +     + + +  G E  N   + +S +  Y ++G  ++A  IFD  + ++  
Sbjct: 262 SANMGGIEEGKQSHAIAIVNGLELDN--ILGTSILNFYCKVGLIEYAEMIFDRIIGKDIV 319

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +I GYVQ     +A+ +  +++ L+ + +D VT  + +SA ++ Q L+LG+++  Y
Sbjct: 320 TWNLLISGYVQQGLVDDAMYM-CKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCY 378

Query: 356 IIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEG 395
            I++     ++                    V  +  E+D++ WNT+++A+  +GL  E 
Sbjct: 379 SIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEA 438

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
           L L Y+M  +    + +T  +++   S LRN  V +    +L         M+S      
Sbjct: 439 LKLFYDMLLESVPPNIITWNSII--LSFLRNGQVDEAKEMFL--------QMQS------ 482

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
             SG+                +  +W  M+ G+ QNG  EEA +  R+M E  + PN  T
Sbjct: 483 --SGIFP--------------NLISWTTMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFT 526

Query: 516 IASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           I+  L AC  + ++  G+ +HG+ IR +    +V   TSL+D+Y+K G IN A  VF   
Sbjct: 527 ISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNK 586

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
                  +  MI  Y  +G  + +++L+R ++   ++PD ITF ++L AC++AG + + +
Sbjct: 587 LYDELPLHNAMISAYALYGNVKESITLYRRLEDMAMKPDNITFTSLLYACTHAGDIVQAI 646

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
            IF  M  ++ ++P  EHY  + D+L   G+  +A E ++E+  + +   I  SL+ SC 
Sbjct: 647 NIFTEMVSKHDMKPCLEHYGLMVDILASSGETNKALELIEEMPYKPDARMI-QSLVASCN 705

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
               +EL + ++++LLE +  NS  G +V +SN YA EG+W  V K+R+ M+ +GL+K+ 
Sbjct: 706 KQHKTELVDYLSRQLLESEPENS--GNYVTISNAYAIEGSWNEVMKMREMMKAKGLKKKP 763

Query: 755 GCSWIDVGGY-VNRFASKDQEHPQSHKIYEMLERLAMEM 792
           GCSWI + G  V+ F + D  H ++ +I  +L  L  ++
Sbjct: 764 GCSWIQIKGEGVHVFVANDMTHIKNDEIQRILALLLYDL 802



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 250/493 (50%), Gaps = 25/493 (5%)

Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
           EA+R  + M    +R     +  +        D  +   ++  ++K G+ Y  + ++ + 
Sbjct: 31  EALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGAFYARNEYIETK 90

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
            +  YA+    + A+ +F     RN   W  +IG   +      A+  FV++LE + ++ 
Sbjct: 91  LLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLKCRIGLCEGALLGFVEMLE-NGVLP 149

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPV--------------IVL 368
           D+    +   A   L     G+ +H Y++K       FVA  +              +V 
Sbjct: 150 DNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVLDDARMVF 209

Query: 369 NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD 428
           + + ER+VV+WN ++  +VQNG+++E + L+ +M+K+G     VTV+  LSA++N+   +
Sbjct: 210 DEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIE 269

Query: 429 VGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            GKQ+HA  + +G+  +  + + +++ Y K GLI+ A  IF++     +D  TWN +I+G
Sbjct: 270 EGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIG--KDIVTWNLLISG 327

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           Y Q GL+++A    + M   N+  + VT+++++ A     N+ LGK++  +SIR+  +  
Sbjct: 328 YVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESE 387

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG 607
           + + +S +DMY+K G I  A  VF    EK+ + + T++  Y   G+S  AL LF  M  
Sbjct: 388 IVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLL 447

Query: 608 CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVV 667
             + P+ IT+ +++ +    G VDE  ++F L  Q   I P+   +  + +   + G   
Sbjct: 448 ESVPPNIITWNSIILSFLRNGQVDEAKEMF-LQMQSSGIFPNLISWTTMMNGWVQNGCSE 506

Query: 668 EAYEFVKELGEEG 680
           EA  F++++ E G
Sbjct: 507 EAIIFLRKMQESG 519



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 214/435 (49%), Gaps = 39/435 (8%)

Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
           ++L  GQQ+HA I+KN        ++   +++  A  +              R+V SW  
Sbjct: 62  RDLCTGQQIHARILKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVFSWAA 121

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           +I    + GL +  L+   EM + G + D+  V  +  A   L     G+  H Y+L+ G
Sbjct: 122 IIGLKCRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAG 181

Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
           +H    + S L DMY K G++  AR +F+  +  +R+   WNA++ GY QNG+ EEA   
Sbjct: 182 LHDCVFVASSLADMYGKCGVLDDARMVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRL 239

Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
              M +  + P  VT+++ L A   MG IE GKQ H  +I   L+ +  +GTS+++ Y K
Sbjct: 240 LSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCK 299

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
            G+I YA  +F +I  K+ VT+  +I GY Q G+ + A+ + + M+   +  D++T   +
Sbjct: 300 VGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTL 359

Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
           +SA +    ++ G ++     Q Y I+ S E    +A    DM  + G +V+A +  +  
Sbjct: 360 MSAAARTQNLNLGKEV-----QCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFEST 414

Query: 677 GEEGNVLEIWGSLLGSCRLHGHS-ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
            E+  +L  W +LL +    G S E  ++    LLE    N +    ++LS  +   G  
Sbjct: 415 AEKDLIL--WNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILS--FLRNGQV 470

Query: 736 ENVDKVRKEMRERGL 750
           +   ++  +M+  G+
Sbjct: 471 DEAKEMFLQMQSSGI 485



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 141/261 (54%), Gaps = 5/261 (1%)

Query: 378 SWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
           S+   IS+  ++G   E L LV EM  +   I       +L      R+   G+Q HA +
Sbjct: 15  SYFHQISSLCKHGEIREALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARI 74

Query: 438 LRHGIHF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           L++G  +   E +E+ L+  YAK   ++ A+ +F +     R+  +W A+I    + GL 
Sbjct: 75  LKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRV--RNVFSWAAIIGLKCRIGLC 132

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           E A + F +MLE+ V P+   + +V  AC  +     G+ +HG+ ++  L   VFV +SL
Sbjct: 133 EGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSL 192

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
            DMY K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  GIEP  
Sbjct: 193 ADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTR 252

Query: 615 ITFVAVLSACSYAGLVDEGLQ 635
           +T    LSA +  G ++EG Q
Sbjct: 253 VTVSTCLSASANMGGIEEGKQ 273



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 191/457 (41%), Gaps = 91/457 (19%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD I     V WN +I G+V   L  +A+ +   M+  +   
Sbjct: 292 SILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLEN--L 349

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             D+ T S+++ A A T+NL +GK V C+ IR        + +S ++MY+ C S +DA+ 
Sbjct: 350 RYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAK- 408

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            KVF++   ++++ WNT+++ Y  +    EA++ F  ML   + 
Sbjct: 409 -----------------KVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVP 451

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P+ I++ ++  +    G    A  ++             L + SS IF            
Sbjct: 452 PNIITWNSIILSFLRNGQVDEAKEMF-------------LQMQSSGIF------------ 486

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
                    N   W TM+ G+VQN    EAI +F++ ++   +  +  T   ALSA + L
Sbjct: 487 --------PNLISWTTMMNGWVQNGCSEEAI-IFLRKMQESGLRPNAFTISVALSACTHL 537

Query: 344 QELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNTM 382
             L+ G+ +H YII+NF     +                     V    +  ++   N M
Sbjct: 538 VSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAM 597

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA---------ASNLRNQDVGKQT 433
           ISA+   G   E + L   ++      D++T T+LL A         A N+  + V K  
Sbjct: 598 ISAYALYGNVKESITLYRRLEDMAMKPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHD 657

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK 470
               L H          ++D+ A SG    A ++ E+
Sbjct: 658 MKPCLEH-------YGLMVDILASSGETNKALELIEE 687


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 182/558 (32%), Positives = 311/558 (55%), Gaps = 38/558 (6%)

Query: 270 IFMYAELGCFDFARKIFDNCLER--------NTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           I +Y++LG    AR +FD+            N+ + NTM+  Y       EAI+L++ + 
Sbjct: 65  IILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQ 124

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI--------- 366
            +  +  ++ T+   L   +       G+ +H  +++       FV   ++         
Sbjct: 125 RMG-VGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 367 -----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                V + ++ RDVV W  MI+ + Q     + LML  +MQ++GF+ D +T  ++ SA 
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 422 SNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
             L +  +    H Y + +G I    + + ++ MYAK G ++ AR +F++ +  +R+  +
Sbjct: 244 GQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRME--ERNGIS 301

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
           WN+M++GYTQNG   +A   F QM      PN VT   ++ AC+ +G+  LG++LH F I
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVF--AKIPEKNSVTYTTMILGYGQHGMSERA 598
              +D +  +  +++DMY K G ++ A  +F   ++ E++  ++  +I GYG HG  + A
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421

Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
           L LF  M+  G+EP+ ITF ++LSACS+AGL+DEG + F  M +   ++P  +HY C+ D
Sbjct: 422 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVD 480

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
           MLGR G + EA+  +K++    +  E+WG+LL +CR+HG++EL E+ A  L +++  ++ 
Sbjct: 481 MLGRAGFLNEAFRLIKKIPSRPSD-EVWGALLLACRIHGNTELGEIAANNLFQLEPEHT- 538

Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
            GY+VL+SNIYA    W+ V+ VR+ M+ RGL+K    S I+ G  V+ F + DQ  P  
Sbjct: 539 -GYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYY 597

Query: 779 HKIYEMLERLAMEMRNAG 796
            ++Y  +E LA+EM+  G
Sbjct: 598 REVYRKVESLAIEMKMVG 615



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 164/547 (29%), Positives = 259/547 (47%), Gaps = 61/547 (11%)

Query: 24  LPQIHS-LSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITR--------PTTVIW 73
           L  IHS LS     L TP   +RL  +  + G  H AR LFD            P + + 
Sbjct: 41  LKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLC 100

Query: 74  NTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHF 133
           NT++  +      YEAI LY  M++       +N+TY  VLK CA       G+ VH   
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMG--VGVNNFTYPFVLKVCASELGAVFGEVVHGQV 158

Query: 134 IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVA 193
           +R       FV  +L++MY+ C    DA                   +VFD M  R+VV 
Sbjct: 159 VRTGFGSDLFVEAALVDMYAKCGEIGDAH------------------EVFDRMLIRDVVC 200

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W  +++ Y + ER ++A+  FR M   G     I+ ++V  A+  LGD + A  V+G  V
Sbjct: 201 WTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAV 260

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
             G  ++ D+ V +S + MYA+ G  + AR +FD   ERN   WN+M+ GY QN  P +A
Sbjct: 261 LNG--FIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDA 318

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI- 372
           + LF Q ++  E   + VT L  +SA S L    LG++LH ++I + + +   + NA++ 
Sbjct: 319 LSLFNQ-MQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMD 377

Query: 373 ---------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                                ERDV SWN +IS +  +G   E L L   MQ +G   + 
Sbjct: 378 MYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPND 437

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
           +T T++LSA S+    D G++  A + +  +  E M+ Y  ++DM  ++G +  A ++ +
Sbjct: 438 ITFTSILSACSHAGLIDEGRKCFADMTKLSVRPE-MKHYACMVDMLGRAGFLNEAFRLIK 496

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMG 527
           K  S   D+  W A++     +G  E   +A   +  LE   T   V ++++  A N   
Sbjct: 497 KIPSRPSDE-VWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWK 555

Query: 528 NIELGKQ 534
            +E+ +Q
Sbjct: 556 EVEMVRQ 562


>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 341/653 (52%), Gaps = 72/653 (11%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S L  C     + +G+  HC  ++       FV  SL++MY+ C                
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKC---------------- 161

Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
              + D   +V+D M   +    N ++S Y +   +V+A + F  +  MG RP+  ++  
Sbjct: 162 --GEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYST 219

Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
           +     ++   +    ++  +VK+  +Y+++  V ++ + +Y++ G  + A  +F+N  +
Sbjct: 220 MLAVCGTISAIQEGKQLHAHVVKM--QYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQ 277

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           RN   W   I G+ Q+    +A++ F  + E   I  ++ TF   L++       DLG+ 
Sbjct: 278 RNIISWTASINGFYQHGDFKKALKQFSMMRE-SGIEPNEFTFSIVLASCG----CDLGKW 332

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNT--MISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           +      N                   W    ++S F+   + +EG       +      
Sbjct: 333 MKQRTSSN------------------RWGGQHLMSIFLLRKMIEEG------NKPTSLRP 368

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIF 468
           +   + ++L A  +L ++  G+  H  +L++    +  + S LI MY+K G ++ A ++F
Sbjct: 369 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 428

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           +       +  +WN +IAG             F QML+    P+ VTI+S+LPAC  + N
Sbjct: 429 DWIP----NVVSWNTLIAG-------------FSQMLDQGFCPSSVTISSLLPACTNVAN 471

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           +  GK++HG+++   ++++V+V ++L+DMY+K G I+ A  +F  +PE+N+VT+ ++I G
Sbjct: 472 LRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFG 531

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y  HG    A+ LF  M+    + D +TF AVL+ACS+AG+V+ G  +F  MQ++Y+I+P
Sbjct: 532 YANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEP 591

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             EHY C+ D+LGR GK+ EAY+ +K +  E +   +WG+LLG+CR HG+ ELAEV A+ 
Sbjct: 592 RLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKF-VWGALLGACRNHGNIELAEVAAEH 650

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
           L E++  +  PG  +LLSN+YA+ G W N  K++K M++R   K  GCSWI+ 
Sbjct: 651 LFELEPES--PGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIEA 701



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 218/525 (41%), Gaps = 114/525 (21%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +++D +T       N +I  +  N    +A  ++ Q+      T  ++YTYS++L  C
Sbjct: 167 AVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMG--TRPNHYTYSTMLAVC 224

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                ++ GK +H H ++        V N+LL +YS C    +AE+              
Sbjct: 225 GTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEI-------------- 270

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF+ + +RN+++W   ++ + +   + +A++QF MM   GI P+  +F  V  +  
Sbjct: 271 ----VFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326

Query: 238 -SLGDY---KSADVVYG--------LLVKLGSE--------------------------- 258
             LG +   +++   +G        LL K+  E                           
Sbjct: 327 CDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDR 386

Query: 259 --------------YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
                         + +D ++ S+ I+MY++ G  + A ++FD     N   WNT+I G+
Sbjct: 387 RTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD--WIPNVVSWNTLIAGF 444

Query: 305 VQNNHPVEAIELFVQVLELDE-IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVAL 363
            Q                LD+      VT  S L A + +  L  G+++H Y +   V  
Sbjct: 445 SQ---------------MLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEK 489

Query: 364 PVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
            V V +A++                    ER+ V+WN++I  +  +G  +E + L  +M+
Sbjct: 490 DVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQME 549

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLI 461
           +    +D +T TA+L+A S+    ++G+     +         +E Y  ++D+  ++G +
Sbjct: 550 ESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKL 609

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             A  +  K    + D+  W A++     +G +E A VA   + E
Sbjct: 610 SEAYDLI-KAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFE 653



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 49/354 (13%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           + +   S+LKAC    + R G+ +H   ++       ++ ++L+ MYS C          
Sbjct: 369 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKC---------- 418

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
                      +  C+VFD +   NVV+WNT+++              F  ML  G  PS
Sbjct: 419 --------GHVEKACRVFDWI--PNVVSWNTLIA-------------GFSQMLDQGFCPS 455

Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
           +++  ++ PA +++ + +    ++G  + +G E   D++V S+ + MYA+ G    A+ +
Sbjct: 456 SVTISSLLPACTNVANLRHGKEIHGYAMVIGVE--KDVYVRSALVDMYAKCGYISEAKIL 513

Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
           F    ERNT  WN++I GY  + +  EAIELF Q+ E D    D +TF + L+A S    
Sbjct: 514 FYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESD-TKLDHLTFTAVLNACSHAGM 572

Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
           ++LG+ L   + + +           IE  +  +  M+    + G   E   L+  M  +
Sbjct: 573 VELGESLFRKMQEKY----------RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVE 622

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
               D     ALL A  N  N ++ +    +L        G    L ++YA +G
Sbjct: 623 ---PDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAG 673



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 5/226 (2%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+   + S L  C   G +ELG++ H F ++  L  + FV TSLIDMY+K G ++ A  V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
           + K+   ++ T   +I  Y ++G   +A  +F  +   G  P+  T+  +L+ C     +
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230

Query: 631 DEGLQIF-DLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
            EG Q+   +++ +Y  + +  +   +  +  + G + EA    + LG+  N++  W + 
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEAEIVFENLGQR-NIIS-WTAS 286

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +     HG  + A      + E     +   + ++L++   + G W
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKW 332



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 77/188 (40%), Gaps = 35/188 (18%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A ++FD I  P  V WNT+I GF             SQM       S  + T SS
Sbjct: 419 GHVEKACRVFDWI--PNVVSWNTLIAGF-------------SQMLDQGFCPS--SVTISS 461

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L AC    NLR GK +H + +        +V ++L++MY+ C    +A++         
Sbjct: 462 LLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKI--------- 512

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                    +F  M  RN V WN+++  Y       EA+  F  M     +   ++F  V
Sbjct: 513 ---------LFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAV 563

Query: 233 FPALSSLG 240
             A S  G
Sbjct: 564 LNACSHAG 571


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 179/604 (29%), Positives = 319/604 (52%), Gaps = 31/604 (5%)

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           RP   +F  V    + LG        +   ++LG     D++  +S +  YA LG  D A
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVA-AADVYTGNSLLAFYARLGLVDDA 163

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            ++FD    R+   WN+M+ GYV N     A+  F ++ E  E+  D V  ++AL+A   
Sbjct: 164 ERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCL 223

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTM 382
              L  G+++HAY+I++ +   V V  ++++                    R VV+WN M
Sbjct: 224 ESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCM 283

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG- 441
           I  +  N   +E      +M+ +G  ++ VT   LL+A +   +   G+  H Y+ R   
Sbjct: 284 IGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQF 343

Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
           +    +E+ L++MY+K G +K++ ++F +  +  +   +WN MIA Y    +  EA   F
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTT--KTLVSWNNMIAAYMYKEMYMEAITLF 401

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
             +L   + P+  T+++V+PA   +G +   +Q+H + IR    +N  +  +++ MY++ 
Sbjct: 402 LDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARC 461

Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           G +  +  +F K+  K+ +++ TMI+GY  HG    AL +F  MK  G+ P+  TFV+VL
Sbjct: 462 GDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVL 521

Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
           +ACS +GL DEG   F+ MQ++Y + P  EHY C+ D+LGR G + E  +F++ +  +  
Sbjct: 522 TACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPID-P 580

Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDT---RNSMPGYHVLLSNIYAEEGNWENV 738
              +WGSLL + R     ++AE  A+++ +++     +   G +VL+S++YA+ G W++V
Sbjct: 581 TFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDV 640

Query: 739 DKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA---MEMRNA 795
           ++++  M E+GLR+    S +++ G    F + D  HPQS  I E+   L+    EMR+ 
Sbjct: 641 ERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDP 700

Query: 796 GNKT 799
            N++
Sbjct: 701 MNQS 704



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 218/494 (44%), Gaps = 47/494 (9%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRC-FSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
           D +T+  VLK CA    L  G+A H   IR   +    +  NSLL  Y+      DAE  
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE-- 164

Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIR 223
                           +VFD M  R+VV WN++V  YV       A+  FR M   + ++
Sbjct: 165 ----------------RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQ 208

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
              +  +    A            V+  +++ G E+  D+ V +S + MY + G    A 
Sbjct: 209 HDGVGIIAALAACCLESALMQGREVHAYVIRHGMEH--DVKVGTSILDMYCKCGDIASAE 266

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            +F     R    WN MIGGY  N  P EA + FVQ ++ +    + VT ++ L+A +Q 
Sbjct: 267 GVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQ-MKAEGHQVEVVTAINLLAACAQT 325

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMI 383
           +    G+ +H YI +      V++  A++E                    + +VSWN MI
Sbjct: 326 ESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMI 385

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           +A++   +  E + L  ++  Q    D  T++A++ A   L      +Q H+Y++R G  
Sbjct: 386 AAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYG 445

Query: 444 FEGM-ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
              +  + ++ MYA+ G + ++R+IF+K  +  +D  +WN MI GY  +G    A   F 
Sbjct: 446 ENTLIMNAIMHMYARCGDVLSSREIFDKMAA--KDVISWNTMIMGYAIHGQGRSALEMFS 503

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           +M  + + PN  T  SVL AC+  G  + G  Q +     Y +   +     + D+  ++
Sbjct: 504 EMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRA 563

Query: 562 GVINYAANVFAKIP 575
           G +         +P
Sbjct: 564 GDLKEVMQFIENMP 577



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 214/508 (42%), Gaps = 54/508 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V WN+++ G+V N L   A++ + +M ++      D     + L AC
Sbjct: 163 AERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQH-DGVGIIAALAAC 221

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                L  G+ VH + IR        V  S+L+MY  C     AE               
Sbjct: 222 CLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAE--------------- 266

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               VF TM  R VV WN ++  Y   ER  EA   F  M   G +   ++ +N+  A +
Sbjct: 267 ---GVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACA 323

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
                     V+G + +   +++  + + ++ + MY+++G    + K+F     +    W
Sbjct: 324 QTESSLYGRSVHGYITR--RQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSW 381

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA-LSAVSQLQELDLGQQLHAYI 356
           N MI  Y+     +EAI LF+ +  L++ ++ D   +SA + A   L  L   +Q+H+YI
Sbjct: 382 NNMIAAYMYKEMYMEAITLFLDL--LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYI 439

Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
           I+       +++NA++                     +DV+SWNTMI  +  +G     L
Sbjct: 440 IRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSAL 499

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDM 454
            +  EM+  G   +  T  ++L+A S     D G      + R       +E Y  + D+
Sbjct: 500 EMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDL 559

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMI-AGYTQNGL------LEEAFVAFRQMLEH 507
             ++G +K   Q  E N   D     W +++ A   +N +       E  F   +  LEH
Sbjct: 560 LGRAGDLKEVMQFIE-NMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEH 618

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQL 535
           + T   V I+S+        ++E  K L
Sbjct: 619 DNTGCYVLISSMYADAGRWKDVERIKSL 646



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 23/323 (7%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+ G    A  +F ++   T V WN +I G+  N  P EA   + QMK      
Sbjct: 251 SILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQV 310

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             +  T  ++L ACA+T +   G++VH +  R    P   +  +LL MYS          
Sbjct: 311 --EVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYS---------- 358

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
              K  +V  S+     KVF  M  + +V+WN +++ Y+  E Y+EA+  F  +L   + 
Sbjct: 359 ---KVGKVKSSE-----KVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLY 410

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P   +   V PA   LG  +    ++  +++LG  Y  +  + ++ + MYA  G    +R
Sbjct: 411 PDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLG--YGENTLIMNAIMHMYARCGDVLSSR 468

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           +IFD    ++   WNTMI GY  +     A+E+F + ++ + +  ++ TF+S L+A S  
Sbjct: 469 EIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSE-MKCNGLRPNESTFVSVLTACSVS 527

Query: 344 QELDLGQQLHAYIIKNFVALPVI 366
              D G      + +++  +P I
Sbjct: 528 GLTDEGWTQFNSMQRDYGMIPQI 550


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 194/616 (31%), Positives = 329/616 (53%), Gaps = 38/616 (6%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           RR++  WN ++        + + +  +  M   G+  + +++  +  A ++L   +   +
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++G ++KLG  +  D FV ++ + MY++      AR++FD   +R+   WN M+  Y + 
Sbjct: 68  LHGHVLKLG--FQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRR 125

Query: 308 NHPVEAIELFVQVLELDEIVFDDV--TFLSALSAVSQLQELD---LGQQLHAYIIK-NFV 361
           +   +A+ L  ++  L    F+    TF+S LS  S L   +   LG+ +H  +IK   V
Sbjct: 126 SSMDQALSLLKEMWVLG---FEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIV 182

Query: 362 ALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
            L V + N+++                    E+ ++SW TMI  +V+ G   E   L Y+
Sbjct: 183 YLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQ 242

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGL 460
           MQ Q   ID V    L+S    +R+  +    H+ +L+ G + +  +E+ LI MYAK G 
Sbjct: 243 MQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGN 302

Query: 461 IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVL 520
           + +AR+IF+     ++   +W +MIAGY   G   EA   FR+M+  ++ PN  T+A+V+
Sbjct: 303 LTSARRIFDLII--EKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVV 360

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC  +G++ +G+++  +     L+ +  V TSLI MYSK G I  A  VF ++ +K+  
Sbjct: 361 SACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLT 420

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGC-GIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
            +T+MI  Y  HGM   A+SLF  M    GI PDAI + +V  ACS++GLV+EGL+ F  
Sbjct: 421 VWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKS 480

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           MQ+++ I P+ EH  C+ D+LGRVG++  A   ++ +  +    ++WG LL +CR+HG+ 
Sbjct: 481 MQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQA-QVWGPLLSACRIHGNV 539

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
           EL E+   +LL  D+     G +VL++N+Y   G W+    +R  M  +GL KE G S +
Sbjct: 540 ELGELATVRLL--DSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597

Query: 760 DVGGYVNRFASKDQEH 775
           +V    + FA  +Q  
Sbjct: 598 EVTDTYHTFAVGNQSQ 613



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 261/549 (47%), Gaps = 61/549 (11%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           RP   R L+          WN +I     N    + + +YS M  S  +   +N TY  +
Sbjct: 4   RPSFRRSLY---------TWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHG--NNLTYPLL 52

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LKACA   +++ G  +H H ++       FV  +L++MYS C     A            
Sbjct: 53  LKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASAR----------- 101

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  +VFD M +R+VV+WN +VS Y +     +A+   + M  +G  P+  +FV++ 
Sbjct: 102 -------QVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSIL 154

Query: 234 PALSSLGDYKS---ADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
              S+L  ++       ++  L+KLG  Y+ ++ +A+S + MY +    D ARK+FD   
Sbjct: 155 SGYSNLDSFEFHLLGKSIHCCLIKLGIVYL-EVSLANSLMGMYVQFCLMDEARKVFDLMD 213

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           E++   W TMIGGYV+  H VEA  LF Q ++   +  D V FL+ +S   Q+++L L  
Sbjct: 214 EKSIISWTTMIGGYVKIGHAVEAYGLFYQ-MQHQSVGIDFVVFLNLISGCIQVRDLLLAS 272

Query: 351 QLHAYIIK---------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
            +H+ ++K                     N  +   I  + +IE+ ++SW +MI+ +V  
Sbjct: 273 SVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRI-FDLIIEKSMLSWTSMIAGYVHL 331

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGME 448
           G   E L L   M +     +  T+  ++SA ++L +  +G++   Y+  +G+   + ++
Sbjct: 332 GHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQ 391

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM-LEH 507
           + LI MY+K G I  AR++FE+    D+D   W +MI  Y  +G+  EA   F +M    
Sbjct: 392 TSLIHMYSKCGSIVKAREVFERVT--DKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAE 449

Query: 508 NVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            + P+ +   SV  AC+  G +E G K        + +   V   T LID+  + G ++ 
Sbjct: 450 GIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDL 509

Query: 567 AANVFAKIP 575
           A N    +P
Sbjct: 510 ALNAIQGMP 518



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 218/494 (44%), Gaps = 87/494 (17%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTYSSVLK 115
           ARQ+FD + + + V WN ++  +   +   +A+ L  +M      P  S    T+ S+L 
Sbjct: 100 ARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTAS----TFVSILS 155

Query: 116 ACAETRNLR---IGKAVHCHFIRCFSNPSRFVY------NSLLNMYSTCLSSLDAEMVGL 166
             +   +     +GK++HC  I+        VY      NSL+ MY              
Sbjct: 156 GYSNLDSFEFHLLGKSIHCCLIKL-----GIVYLEVSLANSLMGMY-------------- 196

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               V +   D   KVFD M  +++++W T++  YVK    VEA   F  M    +    
Sbjct: 197 ----VQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDF 252

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
           + F+N+      + D   A  V+ L++K G    +   V +  I MYA+ G    AR+IF
Sbjct: 253 VVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP--VENLLITMYAKCGNLTSARRIF 310

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D  +E++   W +MI GYV   HP EA++LF +++  D I  +  T  + +SA + L  L
Sbjct: 311 DLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD-IRPNGATLATVVSACADLGSL 369

Query: 347 DLGQQLHAYIIKNF------VALPVI--------------VLNAVIERDVVSWNTMISAF 386
            +GQ++  YI  N       V   +I              V   V ++D+  W +MI+++
Sbjct: 370 SIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSY 429

Query: 387 VQNGLDDEGLMLVYEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HF 444
             +G+ +E + L ++M   +G M D++  T++  A S           H+ L+  G+ +F
Sbjct: 430 AIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACS-----------HSGLVEEGLKYF 478

Query: 445 EGME------------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
           + M+            + LID+  + G +  A    +     D     W  +++    +G
Sbjct: 479 KSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPP-DVQAQVWGPLLSACRIHG 537

Query: 493 LLEEAFVAFRQMLE 506
            +E   +A  ++L+
Sbjct: 538 NVELGELATVRLLD 551



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 133/262 (50%), Gaps = 7/262 (2%)

Query: 368 LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQ 427
           L     R + +WN MI     NG   + L +   M   G   +++T   LL A +NL + 
Sbjct: 3   LRPSFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSI 62

Query: 428 DVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
             G   H ++L+ G   +  +++ L+DMY+K   + +ARQ+F++     R   +WNAM++
Sbjct: 63  QHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMP--QRSVVSWNAMVS 120

Query: 487 GYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE---LGKQLHGFSIRY- 542
            Y++   +++A    ++M      P   T  S+L   + + + E   LGK +H   I+  
Sbjct: 121 AYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLG 180

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
           ++   V +  SL+ MY +  +++ A  VF  + EK+ +++TTMI GY + G +  A  LF
Sbjct: 181 IVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLF 240

Query: 603 RSMKGCGIEPDAITFVAVLSAC 624
             M+   +  D + F+ ++S C
Sbjct: 241 YQMQHQSVGIDFVVFLNLISGC 262


>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 652

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 184/534 (34%), Positives = 290/534 (54%), Gaps = 59/534 (11%)

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           D +TF   L A ++LQE + G  +   ++       V V+NA +                
Sbjct: 119 DHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLF 178

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQ 427
                RD+VSWNT+I  +V+ G+  E L + + M   G +  D VT+  ++S ++ LR+ 
Sbjct: 179 DGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDL 238

Query: 428 DVGKQTHAYLLRHGIH-------------------------FEGME-------SYLIDMY 455
           ++G++ H Y+  HG+                          FEG++       + +I  Y
Sbjct: 239 ELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGY 298

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           A+ GL+  AR++F  ++  +RD   WNA++ GY Q    +EA   F  M E  V P+ +T
Sbjct: 299 AQFGLMDDARKVF--DEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDIT 356

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + ++L AC+ +G +E+G  +H +  R  +  +V +GT+L+DMYSK G I  A  VF +IP
Sbjct: 357 MVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIP 416

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           EKN++T+T MI G   HG ++ A+  F+ M   G++PD ITF+ VLSAC +AGLV EG +
Sbjct: 417 EKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQE 476

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            F LM  +Y ++   +HY C+ D+LGR G + EA   V  +  E + + +WG+L  +CR+
Sbjct: 477 FFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAV-VWGALFFACRM 535

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           HG+  L E  A KL+E+D  +S  G +VLL+N+YAE    +  DKVR  MR  G+ K  G
Sbjct: 536 HGNITLGEKAAMKLVELDPGDS--GIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPG 593

Query: 756 CSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDATP 809
           CS I++ G V+ F  KD+ H     IY+ L  + +++ +  N  I  S + A P
Sbjct: 594 CSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEHTAN-MIDTSMLLAEP 646



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 54/435 (12%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD       V WNT+I G+V   +P EA+ ++ +M      T  D  T   V+   
Sbjct: 174 ARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTP-DEVTMIGVVSGS 232

Query: 118 AETRNLRIGKAVH----CHFIRCFSNPSRFVYNSLLNMYSTC---------LSSLDAE-M 163
           A+ R+L +G+ +H     H +RC       + N +++MY  C            +D + +
Sbjct: 233 AQLRDLELGRRLHGYVESHGVRCTVR----LMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288

Query: 164 VGLKYVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           V    + V Y+++ L+    KVFD M  R+V  WN +++ YV+ +R  EA+R F  M   
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVY--------GLLVKLGSEYVNDLFVASSAIFM 272
            + P  I+ VN+  A S LG  +    V+         L V LG+  V+          M
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVD----------M 398

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y++ G  + A ++F    E+N   W  MI G   + H   AI+ F +++EL  +  D++T
Sbjct: 399 YSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELG-LQPDEIT 457

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           F+  LSA      +  GQ+  + ++  +           +ER +  ++ M+    + G  
Sbjct: 458 FIGVLSACCHAGLVKEGQEFFSLMVSKY----------HLERKMKHYSCMVDLLGRAGYL 507

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI 452
           DE   LV  M  +    D+V   AL  A     N  +G++    L+       G+   L 
Sbjct: 508 DEAEHLVNTMPMEP---DAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLA 564

Query: 453 DMYAKSGLIKTARQI 467
           +MYA++ + K A ++
Sbjct: 565 NMYAEANMRKKADKV 579



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 206/506 (40%), Gaps = 111/506 (21%)

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
           G V   LP    L  S ++ + P    D+ T+  +LKACA  +    G AV  + +    
Sbjct: 100 GLVTRCLP----LYCSLLRSARP----DHLTFPFLLKACARLQERNYGNAVLGNVLSLGF 151

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
           +   FV N+ ++  + C S  +A                   K+FD    R++V+WNT++
Sbjct: 152 HADVFVVNAAMHFLAVCSSMAEAR------------------KLFDGSHVRDLVSWNTLI 193

Query: 199 SWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDY--------------- 242
             YV+     EA+  F RM+    + P  ++ + V    + L D                
Sbjct: 194 GGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGV 253

Query: 243 ----KSADVVYGLLVKLGS-EYVNDLFVA---------SSAIFMYAELGCFDFARKIFDN 288
               +  +VV  + +K G  E    +F           ++ I  YA+ G  D ARK+FD 
Sbjct: 254 RCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDE 313

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ER+   WN ++ GYVQ     EA+ LF  + E   +  DD+T ++ LSA SQL  L++
Sbjct: 314 MPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA-MVEPDDITMVNLLSACSQLGALEM 372

Query: 349 GQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQ 388
           G  +H YI +  V+L V+                    V   + E++ ++W  MIS    
Sbjct: 373 GMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLAN 432

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
           +G  D  +     M + G   D +T   +LSA             HA L++ G  F  + 
Sbjct: 433 HGHADVAIKYFQRMIELGLQPDEITFIGVLSAC-----------CHAGLVKEGQEFFSL- 480

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
                M +K  L              +R    ++ M+    + G L+EA      M    
Sbjct: 481 -----MVSKYHL--------------ERKMKHYSCMVDLLGRAGYLDEAEHLVNTM---P 518

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQ 534
           + P+ V   ++  AC   GNI LG++
Sbjct: 519 MEPDAVVWGALFFACRMHGNITLGEK 544



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 2/136 (1%)

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           T  GL+      +  +L  +  P+ +T   +L AC  +     G  + G  +      +V
Sbjct: 97  TDRGLVTRCLPLYCSLLR-SARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADV 155

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
           FV  + +   +    +  A  +F     ++ V++ T+I GY + G+   AL +F  M G 
Sbjct: 156 FVVNAAMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGD 215

Query: 609 G-IEPDAITFVAVLSA 623
           G + PD +T + V+S 
Sbjct: 216 GAVTPDEVTMIGVVSG 231


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 204/721 (28%), Positives = 359/721 (49%), Gaps = 50/721 (6%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +L+    + +L +G+A+H    +       F  N+L+N+Y                 
Sbjct: 81  WPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGK--------------- 125

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
              ++K      VFD M  RN + W T++  +++        R  R M  +G   +  + 
Sbjct: 126 ---FNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTC 182

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
             +  A  SL +    + ++G ++K G  +  D+FV +S I MY+  G    A K++ N 
Sbjct: 183 SVILQACDSLENLVRGEQIHGFVIKRG--FDEDVFVGTSLISMYSRCGDLGAAEKVYSNL 240

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
             ++    N MI  Y +     +AI +F+ +L    +  +D TF + +SA +   ++++ 
Sbjct: 241 AYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG-SGLEPNDYTFTNVISACNGDIDVEVL 299

Query: 350 QQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
           + LH   IK      + V NA++                    ER++VSW  ++S +V+N
Sbjct: 300 RVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKN 359

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGME 448
           G   + L    ++ + G   DS     LL   S  +N  +G Q H ++++ G +H   + 
Sbjct: 360 GNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVG 419

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
           + LID+YAK   +++AR +F  +   D++  ++NA+++GY      E+A   F Q+   +
Sbjct: 420 TALIDLYAKCRKLRSARLVF--HSLLDKNIVSFNAILSGYI-GADEEDAMALFSQLRLAD 476

Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
           + P+ VT A +L        +  GK LH + I+   + N  VG ++I MY+K G I  A 
Sbjct: 477 IKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDAC 536

Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
            +F  +   +S+++  +I  Y  HG   +AL LF  MK     PD IT ++VL ACSY+G
Sbjct: 537 QLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSG 596

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           L++EG  +F+ M+ +Y I+P  EH+ C+ D+LGR G + EA  F+      G+ L +W +
Sbjct: 597 LLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPL-LWRT 655

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           L+  C+LHG     ++ +K LL++    +  G ++L+SN+YA  G      +VR  M + 
Sbjct: 656 LVHVCKLHGDLNFGQIASKHLLDLAPEEA--GSYILVSNLYAGGGMLNEAARVRTVMNDL 713

Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNVDAT 808
            + KE G SWI++   V++F + D++HP+S +IY  L+ L  EM+   N     +  D +
Sbjct: 714 KVSKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMKQ--NMIYNRTPADMS 771

Query: 809 P 809
           P
Sbjct: 772 P 772



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 261/547 (47%), Gaps = 54/547 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+ +FD +    T+ W T+I G +  N       +  +M         + +T S +L+AC
Sbjct: 132 AQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGE--EFNEHTCSVILQAC 189

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               NL  G+ +H   I+   +   FV  SL++MYS C     AE               
Sbjct: 190 DSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAE--------------- 234

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KV+  +  ++V   N ++S Y K     +A+  F  +L  G+ P+  +F NV  A +
Sbjct: 235 ---KVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACN 291

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
              D +   V++G+ +K G    +++ V ++ + +Y + G  + A K F    ERN   W
Sbjct: 292 GDIDVEVLRVLHGMCIKCGCG--DEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSW 349

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             ++ GYV+N +  +A+E F Q+LEL  + FD   F + L   S+ + L LG Q+H +++
Sbjct: 350 TALLSGYVKNGNGKKALEGFSQILELG-VGFDSCCFATLLDGCSECKNLGLGLQIHGFVV 408

Query: 358 KNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           K      V                    +V ++++++++VS+N ++S ++  G D+E  M
Sbjct: 409 KLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI--GADEEDAM 466

Query: 398 LVY-EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY---LID 453
            ++ +++      DSVT   LLS +++      GK  HAY+++ G  FE   S    +I 
Sbjct: 467 ALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTG--FEANPSVGNAVIT 524

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYAK G I  A Q+F   +    D  +WNA+I+ Y  +G   +A + F +M +    P+ 
Sbjct: 525 MYAKCGSIGDACQLFYSMNY--LDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDE 582

Query: 514 VTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           +TI SVL AC+  G +E G  L +    +Y +   +     ++D+  ++G ++ A +   
Sbjct: 583 ITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFIN 642

Query: 573 KIPEKNS 579
           + P   S
Sbjct: 643 RSPFSGS 649


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/513 (36%), Positives = 271/513 (52%), Gaps = 61/513 (11%)

Query: 340 VSQLQELDLGQQLHAYII-----------KNFVAL---------PVIVLNAVIERDVVSW 379
           ++ L  L LG Q+HA+++              VA           V V N + E   + +
Sbjct: 80  LTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLF 139

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N+MI A+ + G  +  +   + M   GF  D  T   +L ++  L +  +GK  H  +LR
Sbjct: 140 NSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILR 199

Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
            G+ F+  + + LI +Y K G I  A ++F+  +   RD ++WNA++AGYT++G ++ A 
Sbjct: 200 IGLQFDLYVATSLIILYGKCGEINDAGKVFD--NMTIRDVSSWNALLAGYTKSGCIDAAL 257

Query: 499 VAFRQMLEHN---------------------------------VTPNVVTIASVLPACNP 525
             F +M   N                                 V PN VTI SVLPAC  
Sbjct: 258 AIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQ 317

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP--EKNSVTYT 583
           +  +E G+Q+H  + R  L+ N  V  +L  MY+K G +  A N F K+   EKN + + 
Sbjct: 318 LSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWN 377

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           TMI  Y  +G   +A+S FR M   GI+PD ITF  +LS CS++GLVD GL+ F+ M   
Sbjct: 378 TMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTT 437

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y I P  EHY CVAD+LGR G++ EA + V E+        IWGSLL +CR H + E+AE
Sbjct: 438 YSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGP-SIWGSLLAACRKHRNLEMAE 496

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
             A+KL  ++  N+  G +VLLSN+YAE G W+ VDK+R  ++ +G +K  GCSWI++ G
Sbjct: 497 TAARKLFVLEPENT--GNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEING 554

Query: 764 YVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             + F   D  HPQ  +IY  LE L  +M+ AG
Sbjct: 555 KAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAG 587



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 146/307 (47%), Gaps = 22/307 (7%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
            +F+ I  P+++++N++I  +         +  Y  M  S  +T  D +T+  VLK+  E
Sbjct: 126 SVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMH-SWGFTG-DYFTFPFVLKSSVE 183

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY--- 176
             ++ +GK VH   +R       +V  SL+ +Y  C    DA  V       D S +   
Sbjct: 184 LLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNAL 243

Query: 177 ----------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR--MGIRP 224
                     D    +F+ M  RN+V+W T++S Y ++    +A+  F  M++   G+RP
Sbjct: 244 LAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP 303

Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
           + ++ ++V PA + L   +    ++ L  ++G      + +A +A  MYA+ G    AR 
Sbjct: 304 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTA--MYAKCGSLVDARN 361

Query: 285 IFD--NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
            FD  N  E+N   WNTMI  Y    H ++A+  F ++++   I  DD+TF   LS  S 
Sbjct: 362 CFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAG-IQPDDITFTGLLSGCSH 420

Query: 343 LQELDLG 349
              +D+G
Sbjct: 421 SGLVDVG 427



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/469 (23%), Positives = 198/469 (42%), Gaps = 79/469 (16%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y+ V +       L++G  VH H +     P+  V + ++  Y+   SS D        
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYA---SSGD-------- 120

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                   D    VF+ +   + + +N+++  Y +       V  +  M   G      +
Sbjct: 121 -------IDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFT 173

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  V  +   L        V+GL++++G ++  DL+VA+S I +Y + G  + A K+FDN
Sbjct: 174 FPFVLKSSVELLSVWMGKCVHGLILRIGLQF--DLYVATSLIILYGKCGEINDAGKVFDN 231

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELF------------------------VQVLEL- 323
              R+   WN ++ GY ++     A+ +F                         Q L L 
Sbjct: 232 MTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLF 291

Query: 324 DEIVFDD-------VTFLSALSAVSQLQELDLGQQLHAYIIK---NFVALPVIVLNAVI- 372
           DE+V +D       VT +S L A +QL  L+ G+Q+H    +   N  A  +I L A+  
Sbjct: 292 DEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYA 351

Query: 373 ------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                             E+++++WNTMI+A+   G   + +    EM + G   D +T 
Sbjct: 352 KCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITF 411

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKND 472
           T LLS  S+    DVG +   ++         +E Y  + D+  ++G +  A ++  +  
Sbjct: 412 TGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMP 471

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASV 519
                 + W +++A   ++  LE A  A R++  LE   T N V ++++
Sbjct: 472 M-PAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNM 519



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 31/220 (14%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           L+   + G    A  +F+ +     V W T+I G+  + L  +A+ L+ +M K       
Sbjct: 244 LAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRP 303

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           +  T  SVL ACA+   L  G+ +H    R   N +  V  +L  MY+ C S +DA    
Sbjct: 304 NWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDAR--- 360

Query: 166 LKYVEVDYSKYDLVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
                            FD + R  +N++AWNT+++ Y      ++AV  FR M++ GI+
Sbjct: 361 ---------------NCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQ 405

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDL 263
           P  I+F  +    S  G           LV +G +Y N +
Sbjct: 406 PDDITFTGLLSGCSHSG-----------LVDVGLKYFNHM 434



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 12/140 (8%)

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P +++ A V      +  ++LG Q+H   +   L     VG+ ++  Y+ SG I+ + +V
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA------- 623
           F  I E +S+ + +MI  Y ++G +ER ++ + SM   G   D  TF  VL +       
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187

Query: 624 ----CSYAGLVDEGLQIFDL 639
               C +  ++  GLQ FDL
Sbjct: 188 WMGKCVHGLILRIGLQ-FDL 206


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 203/673 (30%), Positives = 344/673 (51%), Gaps = 52/673 (7%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA   +L     +H   +R       FV   L+ + ++  +  D     ++Y     
Sbjct: 24  LDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHD-----MRYAR--- 72

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVFD M + N   WN ++  Y   E   +A+  FR M R G+ P   +   V 
Sbjct: 73  -------KVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVV 125

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            A ++    K   + D ++ L+ ++G  + +D+FV S  +  Y      + A K+F+   
Sbjct: 126 SASAAFAGLKWRSNGDAIHALVRRIG--FTSDVFVMSGLVNYYGAFRSVEEASKVFEEMY 183

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ER+   W +MI    Q  H  + +++  + ++ + I+ + VT +S LSA  Q Q +D G+
Sbjct: 184 ERDVVSWTSMISACAQCGHWDKVLKMLSE-MQAEGIIPNKVTIISLLSACGQTQAVDEGR 242

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            ++  + K  +   V + NA+I                     R   SWNT+I  FVQN 
Sbjct: 243 WVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNH 302

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
              E L +  EM   G   D +T+ ++LSA + L     G   H+Y+  +GI  +  + +
Sbjct: 303 EHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTN 362

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI+MYAK G +  A ++F+      +D  +W  M+ GY +      AF  F +M    V
Sbjct: 363 SLINMYAKCGDMAAAERVFQTMTK--KDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEV 420

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             + + + S+L AC+ +G ++ G+++H +     + +++ + ++L+DMY+K G I+ A+ 
Sbjct: 421 VAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASE 480

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAG 628
           +F K+  K ++++  MI G   +G  + A+ LF  M +    +PD IT  AVL AC++ G
Sbjct: 481 IFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVG 540

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           +VDEGL+ F LM     + P TEHY C+ D+LGR G + EA+ F+K++  E N + IWGS
Sbjct: 541 MVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV-IWGS 598

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL +CR+H   +L +V+ + ++ +   +   G HVL+SN++AEE  W++V+ VR  M  R
Sbjct: 599 LLAACRVHHRMDLGKVIGQHIVNVAPND--VGVHVLVSNLHAEESQWDDVEHVRGLMGSR 656

Query: 749 GLRKEVGCSWIDV 761
           G+ K  G S + V
Sbjct: 657 GIEKTPGHSSVQV 669



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 271/560 (48%), Gaps = 61/560 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + +P   +WN +I G+     P +A+ ++ +M++     S DNYT ++V+ A 
Sbjct: 71  ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRG--VSPDNYTMAAVVSAS 128

Query: 118 AETRNLRI---GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           A    L+    G A+H    R       FV + L+N Y    S  +A             
Sbjct: 129 AAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEAS------------ 176

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVF+ M  R+VV+W +++S   +   + + ++    M   GI P+ ++ +++  
Sbjct: 177 ------KVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLS 230

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A            VY  + K G E   D+ + ++ I MY + GC   A + F     R T
Sbjct: 231 ACGQTQAVDEGRWVYNQVGKFGIE--ADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           + WNT+I G+VQN+   EA+ +F ++L L  +  D +T +S LSA +QL EL  G  +H+
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEML-LHGVTPDGITLVSVLSACAQLGELRKGMHVHS 347

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
           YI  N +    I+ N++I                    ++DVVSW  M+  +V+      
Sbjct: 348 YIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTM 407

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
              L  EM+    +   + + +LLSA S L   D G++ H+Y+    +  +  +ES L+D
Sbjct: 408 AFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVD 467

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPN 512
           MYAK G I TA +IF K     +   +WNAMI G   NG  +EA   F QMLE  +  P+
Sbjct: 468 MYAKCGCIDTASEIFRKMQH--KQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPD 525

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-----LIDMYSKSGVINYA 567
            +T+ +VL AC  +G ++      G    YL+     V  +     ++D+  ++G+++ A
Sbjct: 526 GITLKAVLGACAHVGMVD-----EGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEA 580

Query: 568 ANVFAKIP-EKNSVTYTTMI 586
            +   K+P E N V + +++
Sbjct: 581 FHFIKKMPIEPNPVIWGSLL 600


>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
          Length = 830

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 228/773 (29%), Positives = 365/773 (47%), Gaps = 118/773 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y  +L+ C   R+L  GK +H   ++   F   + ++   L+  Y+ C    DA    L+
Sbjct: 73  YGEILQGCVYERDLCTGKQIHARILKNGDFYAGNEYIETKLVIFYAKC----DA----LE 124

Query: 168 YVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTI 227
             +V +SK          +R RNV +W  I+    +      A+  F  ML   I P   
Sbjct: 125 IAQVLFSK----------LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNF 174

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
              NV  A  +L   +    V+G +VK G E  + +FVASS   MY + G  D ARK+FD
Sbjct: 175 VVPNVCKACGALQWSRFGRGVHGYVVKAGLE--DCVFVASSLADMYGKCGVLDDARKVFD 232

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ERN   WN ++ GYVQN    EAI L    +  D +    VT  + LSA + +  + 
Sbjct: 233 EIPERNVVAWNALLVGYVQNGMNEEAIRLLSD-MRKDGVEPSRVTVSTCLSASANMGGVA 291

Query: 348 LGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFV 387
            G+Q HA  I N + L  I                    + + + ++DVV+WN +IS +V
Sbjct: 292 EGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYV 351

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-- 445
           Q GL ++ + +   M+ +    D VT++ L+SAA+  +N   GK+   Y +RH +  +  
Sbjct: 352 QQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIV 411

Query: 446 ----GMESY--------------------------LIDMYAKSGLIKTARQIFEKND--- 472
                M+ Y                          L+  YA+SGL   A ++F +     
Sbjct: 412 LASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLES 471

Query: 473 -----------------SGDRDQA-----------------TWNAMIAGYTQNGLLEEAF 498
                            +G+ ++A                 +W  M+ G  QNG  EEA 
Sbjct: 472 VPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAI 531

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL-DQNVFVGTSLIDM 557
           +  R+M +  + PN  +I   L A   + ++  G+ +HG+ +R L    +V + TSL+DM
Sbjct: 532 LFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDM 591

Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
           Y+K G IN A  VF          Y  MI  Y  +G  + A++L+RS++  G +PD ITF
Sbjct: 592 YAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITF 651

Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
            ++LSAC++ G +++ ++IF  M  ++ ++P  EHY  + D+L   G+   A + ++E+ 
Sbjct: 652 TSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMP 711

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            + +   I  SL+ SC     SEL E  ++ LLE +  NS  G +V +SN YA EG+W+ 
Sbjct: 712 YKPDARMIQ-SLVASCNKQHKSELVEYFSRHLLESEPENS--GNYVTISNAYAVEGSWDE 768

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGY--VNRFASKDQEHPQSHKIYEMLERL 788
           V K+R  M+ +GL K  GCSWI + G   V+ F + D+ H +  +I  ++  L
Sbjct: 769 VVKMRDMMKAKGLTKNPGCSWIQIKGEEGVHVFVANDKTHIRKDEIQRIIALL 821



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 139/256 (54%), Gaps = 5/256 (1%)

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           +S+  +NG   E L LV +M  +   I       +L      R+   GKQ HA +L++G 
Sbjct: 42  VSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 101

Query: 443 HFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
            + G   +E+ L+  YAK   ++ A+ +F K     R+  +W A+I    + GL E A +
Sbjct: 102 FYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRV--RNVFSWAAIIGVKCRIGLCEGALM 159

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F +MLE+ + P+   + +V  AC  +     G+ +HG+ ++  L+  VFV +SL DMY 
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYG 219

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV++ A  VF +IPE+N V +  +++GY Q+GM+E A+ L   M+  G+EP  +T   
Sbjct: 220 KCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVST 279

Query: 620 VLSACSYAGLVDEGLQ 635
            LSA +  G V EG Q
Sbjct: 280 CLSASANMGGVAEGKQ 295



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 200/452 (44%), Gaps = 81/452 (17%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L+  C+ G    A  +FD +     V WN +I G+V   L  +AI +   M+  +   
Sbjct: 314 SLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKY 373

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSL-LNMYSTCLSSLDAE 162
            C   T S+++ A A T+NL+ GK V C+ IR  S  S  V  S+ ++MY+ C S +DA+
Sbjct: 374 DC--VTLSTLMSAAARTKNLKFGKEVQCYCIR-HSLESDIVLASITMDMYAKCGSIVDAK 430

Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
                             KVFD+   ++++ WNT+++ Y ++    EA+R F  M    +
Sbjct: 431 ------------------KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESV 472

Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            P+ I++  +  +L   G+   A  ++             L + SS I            
Sbjct: 473 PPNVITWNLIILSLLRNGEVNEAKEMF-------------LQMQSSGI------------ 507

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
                     N   W TM+ G VQN    EAI LF++ ++   +  +  +   ALSA + 
Sbjct: 508 --------SPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQDSGLRPNAFSITVALSASAN 558

Query: 343 LQELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNT 381
           L  L  G+ +H YI++N      +                     V  + +  ++  +N 
Sbjct: 559 LASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNA 618

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RH 440
           MISA+   G   E + L   ++  G   D++T T+LLSA +++ + +   +    ++ +H
Sbjct: 619 MISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKH 678

Query: 441 GIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
           G+    +E Y  ++D+ A +G    A ++ E+
Sbjct: 679 GVK-PCLEHYGLMVDLLASAGETDRALKLIEE 709


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 175/494 (35%), Positives = 281/494 (56%), Gaps = 22/494 (4%)

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           +N   +EA     +++ +D  +  DVT L+ L              ++AY    FV L  
Sbjct: 73  RNGAVMEAKACHGKIIRID--LEGDVTLLNVL--------------INAYSKCGFVELAR 116

Query: 366 IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLR 425
            V + ++ER +VSWNTMI  + +N ++ E L +  EM+ +GF     T++++LSA     
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176

Query: 426 NQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
           +    K+ H   ++  I     + + L+D+YAK G+IK A Q+FE     D+   TW++M
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ--DKSSVTWSSM 234

Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
           +AGY QN   EEA + +R+    ++  N  T++SV+ AC+ +  +  GKQ+H    +   
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
             NVFV +S +DMY+K G +  +  +F+++ EKN   + T+I G+ +H   +  + LF  
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M+  G+ P+ +TF ++LS C + GLV+EG + F LM+  Y + P+  HY C+ D+LGR G
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
            + EAYE +K +  +     IWGSLL SCR++ + ELAEV A+KL E++  N+  G HVL
Sbjct: 415 LLSEAYELIKSIPFDPTA-SIWGSLLASCRVYKNLELAEVAAEKLFELEPENA--GNHVL 471

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEM 784
           LSNIYA    WE + K RK +R+  ++K  G SWID+   V+ F+  +  HP+  +I   
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531

Query: 785 LERLAMEMRNAGNK 798
           L+ L ++ R  G K
Sbjct: 532 LDNLVIKFRKFGYK 545



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 179/358 (50%), Gaps = 27/358 (7%)

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G    A   +G ++++  E   D+ + +  I  Y++ G  + AR++FD  LER+   WNT
Sbjct: 75  GAVMEAKACHGKIIRIDLE--GDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MIG Y +N    EA+++F++ +  +   F + T  S LSA     +    ++LH   +K 
Sbjct: 133 MIGLYTRNRMESEALDIFLE-MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT 191

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            + L + V  A++                    ++  V+W++M++ +VQN   +E L+L 
Sbjct: 192 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLY 251

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
              Q+     +  T+++++ A SNL     GKQ HA + + G      + S  +DMYAK 
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G ++ +  IF  ++  +++   WN +I+G+ ++   +E  + F +M +  + PN VT +S
Sbjct: 312 GSLRESYIIF--SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369

Query: 519 VLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +L  C   G +E G++        Y L  NV   + ++D+  ++G+++ A  +   IP
Sbjct: 370 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 427



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 33/347 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LARQ+FD +   + V WNT+I  +  N +  EA+ ++ +M+      S   +T SS
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS--EFTISS 167

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC    +    K +HC  ++   + + +V  +LL++Y+ C    DA           
Sbjct: 168 VLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA----------- 216

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF++M+ ++ V W+++V+ YV+ + Y EA+  +R   RM +  +  +  +V
Sbjct: 217 -------VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S+L        ++ ++ K G  + +++FVASSA+ MYA+ G    +  IF    E+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSG--FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 327

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N E+WNT+I G+ ++  P E + LF + ++ D +  ++VTF S LS       ++ G++ 
Sbjct: 328 NLELWNTIISGFAKHARPKEVMILF-EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
              +   +   P          +VV ++ M+    + GL  E   L+
Sbjct: 387 FKLMRTTYGLSP----------NVVHYSCMVDILGRAGLLSEAYELI 423



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 56/422 (13%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+ CA    +   KA H   IR        + N L+N YS C            +VE  
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC-----------GFVE-- 113

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                L  +VFD M  R++V+WNT++  Y +     EA+  F  M   G + S  +  +V
Sbjct: 114 -----LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A     D      ++ L VK   +   +L+V ++ + +YA+ G    A ++F++  ++
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDL--NLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ++  W++M+ GYVQN +  EA+ L+   Q + L++  F   T  S + A S L  L  G+
Sbjct: 227 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQF---TLSSVICACSNLAALIEGK 283

Query: 351 QLHAYIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNG 390
           Q+HA I K+      FVA                 I+ + V E+++  WNT+IS F ++ 
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK------QTHAYLLRHGIHF 444
              E ++L  +MQ+ G   + VT ++LLS   +    + G+      +T   L  + +H+
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               S ++D+  ++GL+  A ++  K+   D   + W +++A       LE A VA  ++
Sbjct: 404 ----SCMVDILGRAGLLSEAYELI-KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKL 458

Query: 505 LE 506
            E
Sbjct: 459 FE 460



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 7/186 (3%)

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           N   N   +  +L  C   G +   K  HG  IR  L+ +V +   LI+ YSK G +  A
Sbjct: 56  NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 115

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF  + E++ V++ TMI  Y ++ M   AL +F  M+  G +    T  +VLSAC   
Sbjct: 116 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC--- 172

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           G+  + L+   L     K       Y   A  D+  + G + +A +  + + ++ +V   
Sbjct: 173 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV--T 230

Query: 686 WGSLLG 691
           W S++ 
Sbjct: 231 WSSMVA 236


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 206/639 (32%), Positives = 341/639 (53%), Gaps = 42/639 (6%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           K+FD M + N+V +N+++S YV+     + +  F    R+G++    +      A S  G
Sbjct: 22  KLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGALTACSQSG 81

Query: 241 DYKSADVVYGLLV--KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWN 298
           +  +  +++GL++   LGS+ V    + +S I MY++ G  D+AR +FD+  + +   WN
Sbjct: 82  NLSAGKMIHGLILVYGLGSQVV----LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWN 137

Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-QLQELDL-GQQLHAYI 356
           ++I GYVQN    E + + +Q +  + + F+  T  SAL A S       + G  LH + 
Sbjct: 138 SLIAGYVQNGKYEELLTI-LQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHA 196

Query: 357 IKNFVALPVIV--------------------LNAVIERDVVSWNTMISAFVQN-GLDDE- 394
           IK  + L V+V                     + +++++VV +N M++  +Q   ++D+ 
Sbjct: 197 IKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKC 256

Query: 395 ---GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY 450
               L L +EM+  G      T ++LL A   + +    KQ HA + ++G+   E + S 
Sbjct: 257 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 316

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LID+Y+  G +  A   F  N   +       AMI GY QNG  E A   F ++L +   
Sbjct: 317 LIDLYSVLGSMMDALLCF--NSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEK 374

Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
           P+    ++++ +C  MG +  G+Q+ G + +  + +      S I MY+KSG + YAAN+
Sbjct: 375 PDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDL-YAANL 433

Query: 571 -FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
            F ++   + V+++TMI    QHG +  AL  F  MK CGIEP+   F+ VL ACS+ GL
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
           V+EGL+ FD M+++YK++   +H  CV D+LGR G++ +A   +  LG E   + +W +L
Sbjct: 494 VEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPV-MWRAL 552

Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
           L +CR+H  +  A+ VA+K++E++   S    +VLL NIY + GN     KVR  M ER 
Sbjct: 553 LSACRIHKDTVTAQRVAQKVIELEPLASAS--YVLLYNIYMDAGNKLAASKVRTLMEERR 610

Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           ++KE G SWI +G  V  F S D+ H  S +IY  L+ +
Sbjct: 611 IKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEM 649



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 146/600 (24%), Positives = 270/600 (45%), Gaps = 74/600 (12%)

Query: 47  SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
           S+ C+ G    A +LFD +++   V +N++I G+V  +   + ++L+ + ++       D
Sbjct: 9   SRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLG--LKLD 66

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY-NSLLNMYSTCLSSLDAEMVG 165
            Y  +  L AC+++ NL  GK +H   I  +   S+ V  NSL++MYS C          
Sbjct: 67  KYNCAGALTACSQSGNLSAGKMIH-GLILVYGLGSQVVLTNSLIDMYSKC---------- 115

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
               +VDY++      +FD   + + V+WN++++ YV+  +Y E +   + M + G+  +
Sbjct: 116 ---GQVDYARI-----LFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFN 167

Query: 226 TISFVNVFPALSS--LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           T +  +   A SS   G      +++   +KLG     D+ V ++ + MYA+ G  D A 
Sbjct: 168 TYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL--DVVVGTALLDMYAKTGSLDDAI 225

Query: 284 KIFDNCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           +IFD  +++N  ++N M+ G +Q     +    +A+ LF ++     I     T+ S L 
Sbjct: 226 QIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG-IKPSMFTYSSLLK 284

Query: 339 AVSQLQELDLGQQLHAYIIKN-----------FVAL---------PVIVLNAVIERDVVS 378
           A   +++    +Q+HA + KN            + L          ++  N++    +V 
Sbjct: 285 ACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVP 344

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
              MI  ++QNG  +  L L YE+       D    + ++S+ +N+     G+Q   +  
Sbjct: 345 MTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHAT 404

Query: 439 RHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
           + GI  F   ++  I MYAKSG +  A   F++ +  + D  +W+ MI    Q+G   EA
Sbjct: 405 KVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME--NPDIVSWSTMICSNAQHGHAMEA 462

Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLID 556
              F  M    + PN      VL AC+  G +E G +        Y +  +V     ++D
Sbjct: 463 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVD 522

Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
           +  ++G +  A ++  +             LG+    +  RAL     +  C I  D +T
Sbjct: 523 LLGRAGRLADAESLILR-------------LGFEHEPVMWRAL-----LSACRIHKDTVT 564



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 8/151 (5%)

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G    A  +F K+ + N VTY ++I GY Q    ++ + LF   +  G++ D      
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
            L+ACS +G +  G  I  L+   Y +         + DM  + G+V    ++ + L + 
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILV-YGLGSQVVLTNSLIDMYSKCGQV----DYARILFDH 127

Query: 680 GNVLE--IWGSLLGSCRLHG-HSELAEVVAK 707
            + L+   W SL+     +G + EL  ++ K
Sbjct: 128 SDKLDGVSWNSLIAGYVQNGKYEELLTILQK 158


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 199/728 (27%), Positives = 368/728 (50%), Gaps = 57/728 (7%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y  +L++C    ++    AVH H  R     S F+ NSLL  Y  C   + A +   + +
Sbjct: 5   YLDLLRSCTALPHV---AAVHAHIARAHPTASLFLRNSLLAAY--CRLGVGAPLHAARLI 59

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTIS 228
                         D M RRN V++N ++S Y +      A+  F       G+R    +
Sbjct: 60  --------------DEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFT 105

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +     A S   D ++   V+ + V  G    N +F+++S   MYA  G    AR++FD 
Sbjct: 106 YAAALAACSRALDLRTGKAVHAMTVLDG--LGNGVFLSNSLASMYASCGEMGEARRVFDA 163

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD- 347
             E +   WN+++ GYV+     E +++F  ++    + ++     S +   +   ++  
Sbjct: 164 AEEHDDVSWNSLLSGYVRAGAREETLKVF-SLMCHHGLGWNSFALGSIIKCCASGSDVGR 222

Query: 348 -LGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAF 386
            + + +H  ++K       F+A  +I              +  +V + +V+ +N MI+ F
Sbjct: 223 HIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGF 282

Query: 387 VQNG------LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
            ++       +  E L L  EMQ +G      T +++L A +       GKQ H  +L+H
Sbjct: 283 CRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKH 342

Query: 441 GIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
             H +  + S LID+Y+ SG ++   + F       +D  TW +MI+G  QN L E+A  
Sbjct: 343 SFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPK--QDIVTWTSMISGCVQNELFEKALR 400

Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
            F++ + + + P++ T++SV+ AC  +     G+Q+   +I+Y  ++   +G S I M +
Sbjct: 401 LFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCA 460

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           +SG ++     F ++  ++ V+++ +I  + QHG +  AL +F  M    + P+ +TF+ 
Sbjct: 461 RSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLN 520

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VL+ACS+ GLVD+GL+ +++M+ EY + P+ +H  CV D+LGR G++ +A  F+++    
Sbjct: 521 VLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFH 580

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            + + +W SLL SCR+HG  E  ++VA ++++++  +S    +V+L N+Y + G      
Sbjct: 581 DDAV-VWRSLLASCRIHGDMERGQLVADQIMDLEPTSSAS--YVILYNMYLDAGELSLAS 637

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
           K R  M+ERG++KE G SWI++   V+ F + D+ HP+S+ IY+ L  +  ++    N  
Sbjct: 638 KTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTD 697

Query: 800 IQNSNVDA 807
             ++  D 
Sbjct: 698 NASTGSDG 705



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 157/611 (25%), Positives = 292/611 (47%), Gaps = 58/611 (9%)

Query: 22  PQLPQIHS-LSPPIPKLKTPTIRSRLSKICQ--EGRPHLARQLFDSITRPTTVIWNTIII 78
           P +  +H+ ++   P        S L+  C+   G P  A +L D + R   V +N +I 
Sbjct: 16  PHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLIS 75

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
            +    LP  A+  +++ + ++     D +TY++ L AC+   +LR GKAVH   +    
Sbjct: 76  SYSRAGLPGRALETFARARAAAGLR-VDRFTYAAALAACSRALDLRTGKAVHAMTVLDGL 134

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
               F+ NSL +MY++C    +A                   +VFD     + V+WN+++
Sbjct: 135 GNGVFLSNSLASMYASCGEMGEAR------------------RVFDAAEEHDDVSWNSLL 176

Query: 199 SWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS--ADVVYGLLVKLG 256
           S YV+     E ++ F +M   G+  ++ +  ++    +S  D     A+ V+G +VK G
Sbjct: 177 SGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAG 236

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV----- 311
            +   DLF+AS+ I MYA+ G    A  +F +  + N  V+N MI G+ ++   V     
Sbjct: 237 LD--ADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVS 294

Query: 312 -EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALP 364
            EA+ L+ + ++   +   + TF S L A +   E   G+Q+H  ++K      +++   
Sbjct: 295 REALSLYSE-MQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSA 353

Query: 365 VIVL--------------NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +I L               ++ ++D+V+W +MIS  VQN L ++ L L  E    G   D
Sbjct: 354 LIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPD 413

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFE 469
             T++++++A ++L     G+Q     +++G + F  M +  I M A+SG +    + F+
Sbjct: 414 LFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQ 473

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           + +S  RD  +W+A+I+ + Q+G   +A   F +M+   V PN VT  +VL AC+  G +
Sbjct: 474 EMES--RDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLV 531

Query: 530 ELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYA-ANVFAKIPEKNSVTYTTMIL 587
           + G + +      Y L   +   T ++D+  ++G +  A A +       ++V + +++ 
Sbjct: 532 DDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591

Query: 588 GYGQHGMSERA 598
               HG  ER 
Sbjct: 592 SCRIHGDMERG 602


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 191/570 (33%), Positives = 301/570 (52%), Gaps = 60/570 (10%)

Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
           +A  +F+   E N  +WNTM  G+  +  PV A++L+V ++ L  ++ +  TF   L + 
Sbjct: 15  YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLG-LLPNSYTFPFLLKSC 73

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------- 373
           ++L+    G Q+H +++K    L + V  ++I                            
Sbjct: 74  AKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYT 133

Query: 374 ------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                                   +DVVSWN MIS +V+ G   E L L  EM K     
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRP 193

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF 468
           D  T+  ++SA++   + ++G+Q H+++  HG      + + LID Y+K G ++TA  +F
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLF 253

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
                  +D  +WN +I GYT   L +EA + F++ML    +PN VT+ S+L AC  +G 
Sbjct: 254 LGLSY--KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311

Query: 529 IELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           I++G+ +H +  + L  +     + TSLIDMYSK G I  A  VF  +  K+   +  MI
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            G+  HG +  A  +F  M+   I+PD ITFV +LSACS+AG++D G  IF  M   YKI
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ EL E  A
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGV-IWCSLLKACKMHGNVELGEKFA 490

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
           + L +++  N  PG +VLLSNIYA  G W  V ++R  + ++G++K  GCS I++   V+
Sbjct: 491 QNLFKIEPNN--PGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVH 548

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
            F   D+ HP++ +IY MLE + + ++ AG
Sbjct: 549 EFIIGDKFHPRNREIYGMLEEMEVLLQEAG 578



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 228/524 (43%), Gaps = 85/524 (16%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           EG P+ A  +F++I  P  +IWNT+  G   +  P  A+ LY  M         ++YT+ 
Sbjct: 11  EGLPY-AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLP--NSYTFP 67

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+ +  + G  +H H ++       +V+ SL++MY       DA  V  +    
Sbjct: 68  FLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHR 127

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +               +FD +  ++VV+WN ++S YV+T  Y EA+  F+ M+
Sbjct: 128 DVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMM 187

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   + V V  A +  G  +    V+  +   G  + ++L + ++ I  Y++ G 
Sbjct: 188 KTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG--FGSNLKIVNALIDFYSKCGE 245

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F     ++   WN +IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 246 METACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESP-NDVTMLSILH 304

Query: 339 AVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIERDV 376
           A + L  +D+G+ +H YI K                        +     V N+++ + +
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ---- 432
            +WN MI  F  +G  +    +   M+K     D +T   LLSA S+    D+G+     
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRS 424

Query: 433 -THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            TH Y +   +   G    +ID+   SGL K A +                 MI+  T  
Sbjct: 425 MTHNYKITPKLEHYGC---MIDLLGHSGLFKEAEE-----------------MISTMT-- 462

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
                            + P+ V   S+L AC   GN+ELG++ 
Sbjct: 463 -----------------MEPDGVIWCSLLKACKMHGNVELGEKF 489



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 179/377 (47%), Gaps = 35/377 (9%)

Query: 359 NFVALP--VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
           +F  LP  + V   + E +++ WNTM      +      L L   M   G + +S T   
Sbjct: 9   HFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPF 68

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           LL + + L+    G Q H ++L+ G   +  + + LI MY ++  ++ A ++F+++   D
Sbjct: 69  LLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRD 128

Query: 476 -----------------------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
                                        +D  +WNAMI+GY + G  +EA   F++M++
Sbjct: 129 VVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMK 188

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
            NV P+  T+ +V+ A    G+IELG+Q+H +   +    N+ +  +LID YSK G +  
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
           A  +F  +  K+ +++  +I GY    + + AL LF+ M   G  P+ +T +++L AC++
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 627 AGLVDEGLQIFDLMQQEYK-IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
            G +D G  I   + +  K +  ++     + DM  + G +  A++    +  +   L  
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS--LPA 366

Query: 686 WGSLLGSCRLHGHSELA 702
           W +++    +HG +  A
Sbjct: 367 WNAMIFGFAMHGRANAA 383



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 183/402 (45%), Gaps = 34/402 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR +FD I     V WN +I G+V      EA+ L+ +M K++     D  T  +V+ A 
Sbjct: 148 ARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN--VRPDESTMVTVISAS 205

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A + ++ +G+ VH          +  + N+L++ YS C      EM             +
Sbjct: 206 ARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC-----GEM-------------E 247

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C +F  +  ++V++WN ++  Y     Y EA+  F+ MLR G  P+ ++ +++  A +
Sbjct: 248 TACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACA 307

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K      N   + +S I MY++ G  + A ++F++ L ++   W
Sbjct: 308 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAW 367

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  +     A ++F ++ + +EI  DD+TF+  LSA S    LDLG+ +   + 
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRK-NEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMT 426

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
            N+   P           +  +  MI     +GL  E   ++  M  +    D V   +L
Sbjct: 427 HNYKITP----------KLEHYGCMIDLLGHSGLFKEAEEMISTMTMEP---DGVIWCSL 473

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
           L A     N ++G++    L +   +  G    L ++YA +G
Sbjct: 474 LKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAG 515


>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 196/600 (32%), Positives = 323/600 (53%), Gaps = 61/600 (10%)

Query: 212 RQFRMMLRM----GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN------ 261
             F++++R      +    +SF N+  A ++LG +    VV+ +L+K  S+  +      
Sbjct: 100 HSFKLIIRWHFLNDVHSHVVSFYNL--ARTTLGSFNDL-VVFSILLKTASQLRDIVLTTK 156

Query: 262 -----------DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
                      D FV +S +  Y++ G    ARK+FD   +R+   W +MI  YVQN   
Sbjct: 157 LHCNILKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECA 216

Query: 311 VEAIELFVQVLE--LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA----LP 364
            E + LF ++ E  LD  VF   T  S ++A ++L  L  G+ +H Y+IKN +     L 
Sbjct: 217 EEGLMLFNRMREGFLDGNVF---TVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLA 273

Query: 365 VIVLNAVIE----------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             +LN  ++                       D+V W  MI  + Q G     L L  + 
Sbjct: 274 TSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDK 333

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIK 462
           +    + +SVT+ +LLSA + L N  +GK  H  ++++G+    + + L+DMYAK GLI 
Sbjct: 334 KWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIP 393

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            A  +F    + D+D  +WN++I+GY Q+G   EA   F +M   +  P+ VT+  VL A
Sbjct: 394 DAHYVFAT--TVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSA 451

Query: 523 CNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
           C  +G  ++G  LHGF+++Y L+  +++VGT+L++ Y+K G    A  VF  + EKN+VT
Sbjct: 452 CASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVT 511

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +  MI G G  G    +L+LFR M    + P+ + F  +L+ACS++G+V+EGL IFD M 
Sbjct: 512 WAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMC 571

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           +E    PS +HY C+ D+L R G + EA +F+ ++  +  V  ++G+ L  C LH + + 
Sbjct: 572 KELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGV-GVFGAFLHGCGLHSNFDF 630

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
            EV  +++LE+    +   Y+VL+SN+YA +G W  V +VR+ +++RGL K  G S +++
Sbjct: 631 GEVAIRRMLELHPDQAC--YYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEM 688



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 167/645 (25%), Positives = 295/645 (45%), Gaps = 57/645 (8%)

Query: 8   LPLPPPPPTATPPPPQLPQ-IHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSIT 66
           LP+P PP        + P  + +L   +     P   + +S     G    AR LF  + 
Sbjct: 36  LPVPLPPTIHLSRICKHPTTVKTLHASLIISGHPPDTTLISLYASFGFLRHARTLFHRLP 95

Query: 67  RPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIG 126
            PT   +  II     N++    +  Y+ + +++  +  D   +S +LK  ++ R++ + 
Sbjct: 96  SPTHHSFKLIIRWHFLNDVHSHVVSFYN-LARTTLGSFNDLVVFSILLKTASQLRDIVLT 154

Query: 127 KAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
             +HC+ ++  +  S FV  SL++ YS C    DA                   KVFD +
Sbjct: 155 TKLHCNILKSNAADS-FVLTSLVDAYSKCGKLRDAR------------------KVFDEI 195

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSAD 246
             R+VV+W +++  YV+ E   E +  F  M    +  +  +  ++  A + LG      
Sbjct: 196 PDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGK 255

Query: 247 VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD-----NCLERNTEV-WNTM 300
            V+G ++K G E +N  ++A+S + MY + G    AR +FD      C   +  V W  M
Sbjct: 256 WVHGYVIKNGIE-INS-YLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAM 313

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-- 358
           I GY Q  +P  A+ELF    +   I+ + VT  S LSA +QL+ + +G+ LH  ++K  
Sbjct: 314 IVGYTQRGYPQAALELFTDK-KWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYG 372

Query: 359 -----------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
                              +     V    +++DVVSWN++IS + Q+G   E L L   
Sbjct: 373 LDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM--ESYLIDMYAKSG 459
           M+ + F+ D+VTV  +LSA +++    +G   H + L++G+    +   + L++ YAK G
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCG 492

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
              +AR +F+    G+++  TW AMI G    G    +   FR ML+  + PN V   ++
Sbjct: 493 DATSARMVFD--GMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTL 550

Query: 520 LPACNPMGNIELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
           L AC+  G +E G  +  F  + L    ++     ++D+ +++G +  A +   K+P + 
Sbjct: 551 LAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQP 610

Query: 579 SV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            V  +   + G G H   +      R M    + PD   +  ++S
Sbjct: 611 GVGVFGAFLHGCGLHSNFDFGEVAIRRM--LELHPDQACYYVLIS 653


>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 186/563 (33%), Positives = 307/563 (54%), Gaps = 32/563 (5%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
           N LF+ +S + MY++ G F  A  +FD    R+T  WNTMI G+++N     + + F Q+
Sbjct: 75  NALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQM 134

Query: 321 LELDEIV--FDDVTFLSALSAVSQLQ---ELDLGQQLHAYIIKNFVALPVIVLNAVI--- 372
            E + +   FD  T  + LS    L+      + Q +H  +        + V NA+I   
Sbjct: 135 TESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSY 194

Query: 373 -----------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV-TV 414
                            ER+VV+W  +IS   QN   ++ L L  +M+  G +  +V T 
Sbjct: 195 FKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTY 254

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDS 473
            + L A S L+    G++ H  L + G+  +  +ES L+D+Y+K G +  A QIFE  + 
Sbjct: 255 LSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAE- 313

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
            + D  +   ++  + QNG  EEA   F +M+   +  +   +++VL        + LGK
Sbjct: 314 -ELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGK 372

Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           Q+H   I+    +N FVG  L++MYSK G ++ +  VF ++ +KNSV++ ++I  + +HG
Sbjct: 373 QIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHG 432

Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
              +AL  +  M+  G+ P  +TF+++L ACS+AGLV++G+++ + M  ++ I P +EHY
Sbjct: 433 DGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHY 492

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            CV DMLGR G + EA +F++ L E G VL +W +LLG+C +HG SE+ +  A +L    
Sbjct: 493 ACVVDMLGRAGHLNEAKKFIEGLPEHGGVL-VWQALLGACSIHGDSEMGKYAADRLFSAA 551

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQ 773
             +  P  +VL++NIY+ EGNW+      K M+E G+ KEVG SWI++   VN F   D+
Sbjct: 552 PASPAP--YVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDK 609

Query: 774 EHPQSHKIYEMLERLAMEMRNAG 796
            HP++  I+ +L  L   +++ G
Sbjct: 610 LHPEADVIFWVLSGLLKHLKDEG 632



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 252/562 (44%), Gaps = 82/562 (14%)

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYT-YSSVLKACAETRNLRIGKAVHCHFIRC-----F 137
           NLP+     +SQ    S   S  N+   +S+L  C   RNL +G ++H   I+      F
Sbjct: 10  NLPFNIKPPHSQYLFPSTTKSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDF 69

Query: 138 SNPSR---FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAW 194
               R   F++NSLL+MYS C                   ++     VFD M  R+ V+W
Sbjct: 70  DGSQRNALFIWNSLLSMYSKC------------------GEFRNAGNVFDYMPVRDTVSW 111

Query: 195 NTIVSWYVKTERYVEAVRQFRMML---RMGIRPSTISFVNVFPALSSLGDYKSADV---V 248
           NT++S +++   +  + + F+ M    R+  R    +   +      L    S  V   +
Sbjct: 112 NTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMI 171

Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
           +GL+   G E   ++ V ++ I  Y +  CF   RK+FD  +ERN   W  +I G  QN 
Sbjct: 172 HGLVFVGGFE--REITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNE 229

Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
              +++ LF Q+     +  + +T+LS+L A S LQ L  GQ++H  + K  +   + + 
Sbjct: 230 FYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIE 289

Query: 369 NAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
           +A++                    E D VS   ++ AF QNG ++E + +  +M   G  
Sbjct: 290 SALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGME 349

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI---HFEGMESYLIDMYAKSGLIKTAR 465
           +D+  V+A+L          +GKQ H+ +++       F G  + L++MY+K G +  + 
Sbjct: 350 VDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVG--NGLVNMYSKCGDLSDSL 407

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
            +F +     ++  +WN++IA + ++G   +A   + +M    V P  VT  S+L AC+ 
Sbjct: 408 LVFYQMT--QKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSH 465

Query: 526 MGNIELGKQL-------HGFSIR---YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
            G +E G +L       HG S R   Y           ++DM  ++G +N A      +P
Sbjct: 466 AGLVEKGMELLESMTNDHGISPRSEHY---------ACVVDMLGRAGHLNEAKKFIEGLP 516

Query: 576 EKNSVTYTTMILGYGQ-HGMSE 596
           E   V     +LG    HG SE
Sbjct: 517 EHGGVLVWQALLGACSIHGDSE 538



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 211/457 (46%), Gaps = 56/457 (12%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S LS   + G    A  +FD +    TV WNT+I GF+ N     +   + QM +S+   
Sbjct: 82  SLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNR-V 140

Query: 104 SC--DNYTYSSVLKACAETR---NLRIGKAVH-CHFIRCFSNPSRFVYNSLLNMYSTCLS 157
            C  D  T +++L  C   R   +  + + +H   F+  F      V N+L+  Y  C  
Sbjct: 141 CCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREIT-VGNALITSYFKC-- 197

Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
                             +    KVFD M  RNVV W  ++S   + E Y +++R F  M
Sbjct: 198 ----------------ECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQM 241

Query: 218 LRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
              G + P+ +++++   A S L   +    ++GLL KLG +  +DL + S+ + +Y++ 
Sbjct: 242 RCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQ--SDLCIESALMDLYSKC 299

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  D A +IF++  E +      ++  + QN    EAI++F +++ L   V  D   +SA
Sbjct: 300 GSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEV--DANMVSA 357

Query: 337 LSAVSQLQE-LDLGQQLHAYII-KNFVALP-------------------VIVLNAVIERD 375
           +  V  +   L LG+Q+H+ II KNF   P                   ++V   + +++
Sbjct: 358 VLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKN 417

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
            VSWN++I+AF ++G   + L    EM+ +G     VT  +LL A S+    + G +   
Sbjct: 418 SVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLE 477

Query: 436 YLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFE 469
            +   HGI     E Y  ++DM  ++G +  A++  E
Sbjct: 478 SMTNDHGISPRS-EHYACVVDMLGRAGHLNEAKKFIE 513


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 182/564 (32%), Positives = 309/564 (54%), Gaps = 31/564 (5%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           V+   V +G  +  DL + +  I MY +    D A  +FD  LERN   W  ++ GY+Q 
Sbjct: 26  VHAAAVNMGFGF--DLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQE 83

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
            +   ++ L  + +    +  ++ TF ++L A   L  ++ G Q+H   +K+      +V
Sbjct: 84  GNAKGSLALLCE-MGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVV 142

Query: 368 LNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
            NA I+                    R++VSWN MI+     G   + L+L   MQ QG 
Sbjct: 143 GNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGE 202

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTA 464
           + D  T T+ L A   L     G Q HA L+  G        + S ++D+YAK G +  A
Sbjct: 203 VPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEA 262

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
           +++F++ +   ++  +W+A+I G+ Q G L EA   FRQ+ E     +   ++ ++    
Sbjct: 263 QKVFDRIEQ--KNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFA 320

Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
            +  +E GKQ+H + ++     ++ V  S+IDMY K G+   A  +F+++  +N V++T 
Sbjct: 321 DLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTV 380

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI GYG+HG+ E+A+ LF  M+  GIE D + ++A+LSACS++GL+ E  + F  +   +
Sbjct: 381 MITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNH 440

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           +++P+ EHY C+ D+LGR G++ EA   ++ +  + N   IW +LL +CR+HG+ E+   
Sbjct: 441 QMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNE-GIWQTLLSACRVHGNLEIGRE 499

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
           V + L  MDT N  P  +V++SNIYAE G W+  ++VRK ++ +GL+KE G SW+++   
Sbjct: 500 VGEILFRMDTDN--PVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKE 557

Query: 765 VNRFASKDQEHPQSHKIYEMLERL 788
           ++ F   D  HP + KI+EML+ +
Sbjct: 558 IHFFYGGDDTHPLTEKIHEMLKEM 581



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/559 (23%), Positives = 248/559 (44%), Gaps = 91/559 (16%)

Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
           + +L+ C++      G  VH   +         + N L++MY  C               
Sbjct: 8   AKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKC--------------- 52

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
              S+ DL C VFD M  RNVV+W  ++  Y++      ++     M   G++P+  +F 
Sbjct: 53  ---SRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFS 109

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
               A  +LG  ++   ++G+ VK G E+V+   V ++ I MY++ G    A ++F+   
Sbjct: 110 TSLKACGALGVVENGMQIHGMCVKSGFEWVS--VVGNATIDMYSKCGRIGMAEQVFNKMP 167

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   WN MI G+    +  +++ LF Q ++    V D+ TF S L A   L  +  G 
Sbjct: 168 FRNLVSWNAMIAGHTHEGNGRKSLVLF-QRMQGQGEVPDEFTFTSTLKACGALGAIRGGT 226

Query: 351 QLHAYI--------IKNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQ 388
           Q+HA +        I+N +A  ++              V + + +++++SW+ +I  F Q
Sbjct: 227 QIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQ 286

Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR--HGIHFEG 446
            G   E + L  ++++    +D   ++ ++   ++L   + GKQ H Y+L+   G+    
Sbjct: 287 EGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISV 346

Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
             S +IDMY K GL + A ++F +     R+  +W  MI GY ++GL E+A   F +M  
Sbjct: 347 ANS-IIDMYLKCGLTEEAERLFSEMQV--RNVVSWTVMITGYGKHGLGEKAIHLFNRMQL 403

Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
             +  + V   ++L AC                                   S SG+I  
Sbjct: 404 DGIELDEVAYLALLSAC-----------------------------------SHSGLIRE 428

Query: 567 AANVFAKIPEKNSVT-----YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
           +   F+++   + +      Y  M+   G+ G  + A +L  +MK   ++P+   +  +L
Sbjct: 429 SQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMK---LKPNEGIWQTLL 485

Query: 622 SACSYAGLVDEGLQIFDLM 640
           SAC   G ++ G ++ +++
Sbjct: 486 SACRVHGNLEIGREVGEIL 504



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 219/506 (43%), Gaps = 83/506 (16%)

Query: 54  RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
           R  LA  +FD +     V W  ++ G++       ++ L  +M  S      + +T+S+ 
Sbjct: 54  RVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSG--VKPNEFTFSTS 111

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           LKAC     +  G  +H   ++        V N+ ++MYS C                  
Sbjct: 112 LKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKC------------------ 153

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
            +  +  +VF+ M  RN+V+WN +++ +       +++  F+ M   G  P   +F +  
Sbjct: 154 GRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTL 213

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
            A  +LG  +    ++  L+  G        +AS+ + +YA+ G    A+K+FD   ++N
Sbjct: 214 KACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKN 273

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
              W+ +I G+ Q  + +EA++LF Q+ E    V D       +   + L  ++ G+Q+H
Sbjct: 274 LISWSALIQGFAQEGNLLEAMDLFRQLRESVSNV-DGFVLSIMMGVFADLALVEQGKQMH 332

Query: 354 AYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
            YI+K    L + V N++I+                    R+VVSW  MI+ + ++GL +
Sbjct: 333 CYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGE 392

Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
           + + L   MQ  G  +D V   ALLSA S+                              
Sbjct: 393 KAIHLFNRMQLDGIELDEVAYLALLSACSH------------------------------ 422

Query: 454 MYAKSGLIKTARQIFEK---NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NV 509
               SGLI+ +++ F +   N     +   +  M+    + G L+EA    + ++E+  +
Sbjct: 423 ----SGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEA----KNLIENMKL 474

Query: 510 TPNVVTIASVLPACNPMGNIELGKQL 535
            PN     ++L AC   GN+E+G+++
Sbjct: 475 KPNEGIWQTLLSACRVHGNLEIGREV 500



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 180/417 (43%), Gaps = 38/417 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR  +A Q+F+ +     V WN +I G        ++++L+ +M+        D +T++S
Sbjct: 154 GRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVP--DEFTFTS 211

Query: 113 VLKACAETRNLRIGKAVHCHFI-RCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
            LKAC     +R G  +H   I R F    R  + ++++++Y+ C    +A+        
Sbjct: 212 TLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQ-------- 263

Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
                     KVFD + ++N+++W+ ++  + +    +EA+  FR +             
Sbjct: 264 ----------KVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLS 313

Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            +    + L   +    ++  ++K+ S    D+ VA+S I MY + G  + A ++F    
Sbjct: 314 IMMGVFADLALVEQGKQMHCYILKVPSGL--DISVANSIIDMYLKCGLTEEAERLFSEMQ 371

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
            RN   W  MI GY ++    +AI LF + ++LD I  D+V +L+ LSA S    +   Q
Sbjct: 372 VRNVVSWTVMITGYGKHGLGEKAIHLFNR-MQLDGIELDEVAYLALLSACSHSGLIRESQ 430

Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           +  + +  N    P          ++  +  M+    + G   E   L+  M+      +
Sbjct: 431 EYFSRLCNNHQMKP----------NIEHYACMVDILGRAGQLKEAKNLIENMK---LKPN 477

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
                 LLSA     N ++G++    L R           + ++YA++G  K   ++
Sbjct: 478 EGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERV 534



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 70/124 (56%)

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +A +L  C+  G  + G Q+H  ++      ++ +   LIDMY K   ++ A +VF ++ 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           E+N V++T ++ GY Q G ++ +L+L   M   G++P+  TF   L AC   G+V+ G+Q
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 636 IFDL 639
           I  +
Sbjct: 127 IHGM 130


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 202/634 (31%), Positives = 324/634 (51%), Gaps = 47/634 (7%)

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL---S 237
           ++F  M RR+   +NT+++ Y    R  +A+  FR +     RP + S+  +  AL   S
Sbjct: 128 RLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSI----PRPDSFSYNTLLHALGVSS 183

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           SL D      V  L  ++    V D    +  I  +A  G    AR  FD   E++   W
Sbjct: 184 SLAD------VRALFDEMP---VKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSW 234

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE------------ 345
           N M+  YV+N    EA ELF    E D I ++    ++     SQ++E            
Sbjct: 235 NGMLAAYVRNGRIQEARELFDSRTEWDAISWN--ALMAGYVQRSQIEEAQKMFNKMPQRD 292

Query: 346 -LDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            +     +  Y  +  +A    + +    RDV +W  ++S + QNG+ +E   +   M  
Sbjct: 293 VVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPD 352

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIK 462
           +    ++V+  A+++A    R  +  K+     L   +    + S+  ++  YA++G++ 
Sbjct: 353 K----NAVSWNAMMAAYVQRRMMEEAKE-----LFDAMPCRNVASWNTMLTGYAQAGMLD 403

Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
            AR IF       +D  +W AM+A Y+Q G  EE    F++M       N    A VL  
Sbjct: 404 EARAIFGMMPQ--KDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +  +E G QLH   I+       FVG +L+ MY K G +  A + F ++ E++ V++
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSW 521

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
            TMI GY +HG  + AL +F +M+    +PD IT V VL+ACS++GLV++G+  F  M +
Sbjct: 522 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 581

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
           ++ +    EHY C+ D+LGR G++ EA   +K++  E +   +WG+LLG+ R+H +SEL 
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDST-MWGALLGASRIHRNSELG 640

Query: 703 EVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG 762
              A+K+ E++  N+  G +VLLSNIYA  G W +VDK+R  M ERG++K  G SWI+V 
Sbjct: 641 RNAAEKIFELEPENA--GMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQ 698

Query: 763 GYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             V+ F+  D  HP+   IY  LE L + M+ AG
Sbjct: 699 NKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAG 732



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 146/605 (24%), Positives = 269/605 (44%), Gaps = 83/605 (13%)

Query: 21  PPQLPQIH---------SLSPPIP-------KLKTPTIRSR--LSKICQEGRPHLARQLF 62
           PP LP  H            PP P       K     IR    ++   + GR   A +LF
Sbjct: 71  PPMLPSRHLRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVPDAERLF 130

Query: 63  DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRN 122
            ++ R +T  +NT++ G+  N    +A+  +  + +       D+++Y+++L A   + +
Sbjct: 131 AAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRP------DSFSYNTLLHALGVSSS 184

Query: 123 LRIGKAV--------HCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA-EMVGLKYVEVDY 173
           L   +A+           +    S+ +     SL   Y       DA    G+    V  
Sbjct: 185 LADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRN 244

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
            +     ++FD+    + ++WN +++ YV+  +  EA + F  M +  +    +S+  + 
Sbjct: 245 GRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDV----VSWNTMV 300

Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
              +  GD   A  ++ +        + D+F  ++ +  YA+ G  + A+++FD   ++N
Sbjct: 301 SGYARRGDMAEARRLFDVAP------IRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKN 354

Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV-TFLSALSAVSQLQELDLGQQL 352
              WN M+  YVQ     EA ELF      D +   +V ++ + L+  +Q   LD  + +
Sbjct: 355 AVSWNAMMAAYVQRRMMEEAKELF------DAMPCRNVASWNTMLTGYAQAGMLDEARAI 408

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
                  F  +P        ++D VSW  M++A+ Q G  +E L L  EM + G  ++  
Sbjct: 409 -------FGMMP--------QKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRS 453

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFE 469
               +LS  +++   + G Q H+ L++ G     F G  + L+ MY K G ++ A   FE
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVG--NALLAMYFKCGSMEEAHSAFE 511

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
           + +  +RD  +WN MIAGY ++G  +EA   F  M + +  P+ +T+  VL AC+  G +
Sbjct: 512 EME--ERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTS------LIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
           E      G S  Y + ++  V T       +ID+  ++G ++ A N+   +P +   T  
Sbjct: 570 E-----KGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMW 624

Query: 584 TMILG 588
             +LG
Sbjct: 625 GALLG 629



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 214/466 (45%), Gaps = 47/466 (10%)

Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
           AI  +   G    A ++F     R+T  +NTM+ GY  N    +A+  F  +   D   +
Sbjct: 113 AITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSY 172

Query: 329 DDVTFLSALSAVSQLQE-------------LDLGQQLHAYIIKNFVALPVIVLNAVIERD 375
           +  T L AL   S L +             +     + ++     V+L     +   E+D
Sbjct: 173 N--TLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKD 230

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDVGKQTH 434
            VSWN M++A+V+NG   E   L     +     D+++  AL++      + ++  K  +
Sbjct: 231 AVSWNGMLAAYVRNGRIQEARELFDSRTEW----DAISWNALMAGYVQRSQIEEAQKMFN 286

Query: 435 AYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
               R  + +  M    +  YA+ G +  AR++F+   +  RD  TW A+++GY QNG+L
Sbjct: 287 KMPQRDVVSWNTM----VSGYARRGDMAEARRLFDV--APIRDVFTWTAIVSGYAQNGML 340

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           EEA   F  M +     N V+  +++ A      +E  K+L       +  +NV    ++
Sbjct: 341 EEAKRVFDAMPDK----NAVSWNAMMAAYVQRRMMEEAKEL----FDAMPCRNVASWNTM 392

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           +  Y+++G+++ A  +F  +P+K++V++  M+  Y Q G SE  L LF+ M  CG   + 
Sbjct: 393 LTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNR 452

Query: 615 ITFVAVLSACSYAGLVDEGLQIFD-LMQQEYKIQPSTEHYCCVAD----MLGRVGKVVEA 669
             F  VLS C+    ++ G+Q+   L++  Y +       C V +    M  + G + EA
Sbjct: 453 SAFACVLSTCADIAALECGMQLHSRLIKAGYGVG------CFVGNALLAMYFKCGSMEEA 506

Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTR 715
           +   +E+ EE +V+  W +++     HG  + A  V   + +  T+
Sbjct: 507 HSAFEEM-EERDVVS-WNTMIAGYARHGFGKEALEVFDTMRKTSTK 550



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           D  V      I  + ++G +  A  +FA +P +++ TY TM+ GY  +G   +ALS FRS
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
           +      PD+ ++  +L A   +  + +   +FD M
Sbjct: 164 IP----RPDSFSYNTLLHALGVSSSLADVRALFDEM 195


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 177/592 (29%), Positives = 328/592 (55%), Gaps = 32/592 (5%)

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L  L D K    ++  ++  G    ++ F+++S +  Y   G    A++IF +   +N  
Sbjct: 31  LRKLKDLKPLQQIHAQIITSG--LTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  +I G  +N+  VEAI++F +++ +     + VT  S L A + L  + + + +H +
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMI-MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            ++      V V  A++                    ER+VV+WN ++S +  +G  +E 
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEA 207

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           + L   M+++G ++D  T+ +L+ A+ ++    VG   H +++R G   +  +++ L+D+
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNV 513
           Y     +  A ++F  ++   +D A W  M+ G++     + A   F +ML   N+  + 
Sbjct: 268 YVSHNCVDDAHRVF--SEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           + +  +L +C+  G ++ G+++H  +I+     N+FVG+++IDMY+  G +  A   F  
Sbjct: 326 IALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + EK+ V +  MI G G +G    A+ LF  MKG G++PD  TFV+VL ACS+AG+V EG
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           LQIF  M +   + P+ +HY CV D+LGR G++  AY F+  +  + +  +++ +LLG+C
Sbjct: 446 LQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPD-FDVYSTLLGAC 504

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R+HG+ +L   +++K+ EM+  ++  GY+VLLSN+YA  GNWE V   R  +R + ++K+
Sbjct: 505 RIHGNIKLGHEISQKIFEMEPNDA--GYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKD 562

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
            G S I++   +  F + +++HPQ  KI  +L+ L ++++ AG   + N+NV
Sbjct: 563 PGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAG--YVPNTNV 612



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 258/580 (44%), Gaps = 89/580 (15%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++S+L+   + ++L+  + +H   I      + F+ NSL+N Y  C    DA+       
Sbjct: 27  HASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK------- 76

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                      ++F     +NVV+W  ++S   K + +VEA+  FR M+    +P+ ++ 
Sbjct: 77  -----------QIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTI 125

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V PA ++LG  + A  V+   V+ G E   ++FV ++ + MY++ GC   AR++F++ 
Sbjct: 126 SSVLPAFANLGLIRIAKSVHCFWVRGGFE--GNVFVETALVDMYSKFGCMGVARQLFESM 183

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            ERN   WN ++ GY  +    EAI+LF  ++    ++ D  T +S + A   +  L +G
Sbjct: 184 SERNVVTWNAIVSGYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242

Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
             +H +II+                    N V     V + +  +DV +W  M++ F   
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSG 302

Query: 390 GLDDEGLMLVYEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FE 445
              D  +    +M   Q   +DS+ +  +LS+ S+      G++ HA  ++       F 
Sbjct: 303 RHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFV 362

Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
           G  S +IDMYA  G ++ A++ F     G++D   WNAMIAG   NG   +A   F QM 
Sbjct: 363 G--SAVIDMYANCGNLEDAKRFFY--GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMK 418

Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
              + P+  T  SVL AC+  G +  G Q+                     M   S VI 
Sbjct: 419 GSGLDPDESTFVSVLYACSHAGMVYEGLQI------------------FYHMVKTSHVI- 459

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
                       N   Y  +I   G+ G  + A S   +M     +PD   +  +L AC 
Sbjct: 460 -----------PNLQHYACVIDILGRAGQLDAAYSFINNMP---FQPDFDVYSTLLGACR 505

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPS-TEHYCCVADMLGRVG 664
             G +  G +I    Q+ ++++P+   +Y  +++M    G
Sbjct: 506 IHGNIKLGHEI---SQKIFEMEPNDAGYYVLLSNMYALAG 542



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 217/498 (43%), Gaps = 76/498 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+Q+F        V W  +I G   N+   EAI ++ +M   +     +  T SSVL A 
Sbjct: 75  AKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGN--FKPNAVTISSVLPAF 132

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +RI K+VHC ++R     + FV  +L++MYS                   +    
Sbjct: 133 ANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSK------------------FGCMG 174

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +  ++F++M  RNVV WN IVS Y       EA+  F +M R G+     + +++ PA  
Sbjct: 175 VARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+G  +    ++G +++ G  Y ND  + ++ + +Y    C D A ++F     ++   W
Sbjct: 235 SVGCLQVGTGIHGFIIRTG--YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAW 292

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             M+ G+    H   AI+ F ++L +  +  D +  +  LS+ S    L  G+++HA  I
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAI 352

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K   A  + V +AVI                    E+DVV WN MI+    NG   + + 
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAID 412

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L  +M+  G   D  T  ++L A S           HA     G+ +EG++ +       
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACS-----------HA-----GMVYEGLQIFY------ 450

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
             ++KT+  I         +   +  +I    + G L+ A+     M      P+    +
Sbjct: 451 -HMVKTSHVI--------PNLQHYACVIDILGRAGQLDAAYSFINNM---PFQPDFDVYS 498

Query: 518 SVLPACNPMGNIELGKQL 535
           ++L AC   GNI+LG ++
Sbjct: 499 TLLGACRIHGNIKLGHEI 516



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 150/309 (48%), Gaps = 24/309 (7%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +ARQLF+S++    V WN I+ G+  +    EAI L++ M++       D YT  S++ A
Sbjct: 175 VARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV--DFYTIMSLIPA 232

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                 L++G  +H   IR      + +  +L+++Y                  V ++  
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY------------------VSHNCV 274

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPA 235
           D   +VF  M  ++V AW  +++ +     +  A++ F  ML +  ++  +I+ + +  +
Sbjct: 275 DDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSS 334

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S  G  +    V+ L +K  + + N++FV S+ I MYA  G  + A++ F    E++  
Sbjct: 335 CSHSGALQQGRRVHALAIK--TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI G   N +  +AI+LF+Q ++   +  D+ TF+S L A S    +  G Q+  +
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQ-MKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 356 IIKNFVALP 364
           ++K    +P
Sbjct: 452 MVKTSHVIP 460


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 221/763 (28%), Positives = 365/763 (47%), Gaps = 53/763 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LF  + +   V W  I++    N    EA++ Y +M+K      C+    ++V+  C
Sbjct: 98  AQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG--VMCNANALATVVSLC 155

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +   G  V  H +         V NSL+ M+       DAE               
Sbjct: 156 GALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAE--------------- 200

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++FD M  R+ ++WN ++S Y   E Y +       M    ++P   +  ++    +
Sbjct: 201 ---RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA 257

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++ L V  G      L   ++ + MY+  G  D A  +F N   R+   W
Sbjct: 258 SSDLVALGSGIHSLCVSSGLHCSVPLI--NALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMI  YVQ+N  VEA+E   Q+L+ DE   + +TF SAL A S  + L  G+ +HA I+
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375

Query: 358 KNFVALPVIVLNAVI------------ER--------DVVSWNTMISAFVQNGLDD-EGL 396
           +  +   +++ N+++            ER        DVVS N +   +    L+D    
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA--ALEDVANA 433

Query: 397 MLVYE-MQKQGFMIDSVTVTALLSAASNLRN-QDVGKQTHAYLLRHGI-HFEGMESYLID 453
           M V+  M+  G   + +T+  L     +L +    G   HAY+ + G+   E + + LI 
Sbjct: 434 MRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLIT 493

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYA  G ++++  IF + +  ++   +WNA+IA   ++G  EEA   F          + 
Sbjct: 494 MYATCGDLESSTGIFSRIN--NKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDR 551

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
             +A  L +   + ++E G QLHG S++  LD +  V  + +DMY K G ++        
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD 611

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              + +  + T+I GY ++G  + A   F+ M   G +PD +TFVA+LSACS+AGL+D+G
Sbjct: 612 PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  ++ M   + + P  +H  C+ D+LGR+GK  EA +F+ E+    N L IW SLL S 
Sbjct: 672 MDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDL-IWRSLLSSS 730

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R H + ++    AK LLE+D  +     +VLLSN+YA    W +VDK+R  M+   L K 
Sbjct: 731 RTHKNLDIGRKAAKNLLELDPFDD--SAYVLLSNLYATNARWVDVDKLRSHMKTIKLNKR 788

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ H  + KIY  L+ + +++R  G
Sbjct: 789 PACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVG 831



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 179/412 (43%), Gaps = 43/412 (10%)

Query: 40  PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
           P I + ++     G+   A  LF +++R   + WNT+I  +V +N   EA+    Q+ ++
Sbjct: 282 PLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQT 341

Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
                 ++ T+SS L AC+    L  G+ +H   ++        + NSLL MYS C S  
Sbjct: 342 DEGPP-NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSME 400

Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           D E                  +VF++M   +VV+ N +   Y   E    A+R F  M  
Sbjct: 401 DTE------------------RVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRG 442

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
            GI+P+ I+ +N+     SLGD  S  + ++  + + G   ++D ++ +S I MYA  G 
Sbjct: 443 TGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG--LLSDEYITNSLITMYATCGD 500

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + +  IF     ++   WN +I   V++    EAI+LF+          D       LS
Sbjct: 501 LESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGN-KLDRFCLAECLS 559

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVS 378
           + + L  L+ G QLH   +KN +     V+NA ++                    R    
Sbjct: 560 SSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQC 619

Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           WNT+IS + + G   E       M   G   D VT  ALLSA S+    D G
Sbjct: 620 WNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 206/468 (44%), Gaps = 30/468 (6%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R   +W T VS   +      A    R+M    +  S  +  ++  A    G  + A
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 246 D---VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                ++ L  + G   + ++++ ++ + +Y   G    A+++F    +RN   W  ++ 
Sbjct: 61  ACGAAIHALTHRAG--LMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMV 118

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
               N    EA+  + + +  + ++ +     + +S    L++   G Q+ A+++ + + 
Sbjct: 119 ALSSNGCMEEALVAY-RRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             V V N++I                    ERD +SWN MIS +    +  +  +++ +M
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +      D  T+ +L+S  ++     +G   H+  +  G+H    + + L++MY+ +G +
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT-PNVVTIASVL 520
             A  +F   +   RD  +WN MI+ Y Q+    EA     Q+L+ +   PN +T +S L
Sbjct: 298 DEAESLFR--NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSAL 355

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+    +  G+ +H   ++  L   + +G SL+ MYSK   +     VF  +P  + V
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVV 415

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           +   +  GY        A+ +F  M+G GI+P+ IT + +   C   G
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 148/324 (45%), Gaps = 9/324 (2%)

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD---V 429
            R   SW T +S   + GL+     L+  M+++   +    + +L++A  +   Q+    
Sbjct: 3   HRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAAC 62

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G   HA   R G+     + + L+ +Y   GL+  A+++F   +   R+  +W A++   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW--EMPQRNVVSWTAIMVAL 120

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           + NG +EEA VA+R+M +  V  N   +A+V+  C  + +   G Q+    +   L  +V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
            V  SLI M+     +  A  +F ++ E++ +++  MI  Y    +  +   +   M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
            ++PD  T  +++S C+ + LV  G  I  L      +  S      + +M    GK+ E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDE 299

Query: 669 AYEFVKELGEEGNVLEIWGSLLGS 692
           A    + +    +V+  W +++ S
Sbjct: 300 AESLFRNMSRR-DVIS-WNTMISS 321


>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
          Length = 587

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 181/569 (31%), Positives = 316/569 (55%), Gaps = 28/569 (4%)

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++ L ++  + Y  D FVA++ + MYA+      +   ++   E +  +  +M+ GY QN
Sbjct: 11  LHALAIRSCTAY-TDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQN 69

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
               EA+E F + +     +   VT +S +SA +QL+++  GQ  HA++I+N     +++
Sbjct: 70  RMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVL 129

Query: 368 LNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
           +NA++                    E+DVV+W+ M++ +VQ+G   E L    +M + G 
Sbjct: 130 VNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGI 189

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             ++VTV +++ A S   + + G++ H   ++ G   E  + + L+DMY K    + A Q
Sbjct: 190 KPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQ 249

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F +     +D   W  +I+G+TQNGL +E+   F+ ML     P+ VT+  VL AC+  
Sbjct: 250 LFCRMSK--KDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSES 307

Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           G +     LHG+ +       +FV  +L+D+YSK G +  A  VF    EK+ V +++MI
Sbjct: 308 GVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMI 367

Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKI 646
            GYG HG+ ++A+ LF+ M    ++P+++TFV+VLSACS++GLV EG +IF+ M Q Y +
Sbjct: 368 SGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGV 427

Query: 647 QPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVA 706
            P+  H+  + D+LGR G++ EA + +   G        W +LL +CR H  +E++EVVA
Sbjct: 428 VPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADA--HTWCALLAACRAHHDTEMSEVVA 485

Query: 707 KKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVN 766
            KLL++D  ++  GY+ LL+NIY  + NW +  + R  +R+RGL K  GCS +++   ++
Sbjct: 486 AKLLKLDPDHA--GYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVMH 543

Query: 767 RFASKDQEHPQSHKIYEMLERLAMEMRNA 795
            F + ++ H    KI  +L   +  ++  
Sbjct: 544 TFTAGERPHKDWEKISRLLREFSRTLKGG 572



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 215/452 (47%), Gaps = 54/452 (11%)

Query: 62  FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETR 121
           +++ + P  V+  +++ G+  N +  EA+  +S+      +      T  SV+ A A+ +
Sbjct: 48  YNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMP-SPVTLVSVISAAAQLK 106

Query: 122 NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
           ++  G+A H   IR        + N++L  Y             ++   V  ++     +
Sbjct: 107 DVLNGQACHAFVIRNNFEYDLVLVNAILGFY-------------MRIGAVQAAR-----R 148

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F+ M  ++VV W+ +V+ YV++    EA+  ++ M+  GI+P+ ++ V+V  A S   D
Sbjct: 149 LFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPD 208

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    V+ + VK+G E   ++ VA++ + MY +  C + A ++F    +++   W  +I
Sbjct: 209 IEEGRRVHDIAVKIGCEL--EMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVI 266

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII---- 357
            G+ QN  P E++ +F + +       D VT +  L+A S+   +     LH Y++    
Sbjct: 267 SGFTQNGLPDESMRVF-KCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGF 325

Query: 358 --KNFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYE 401
             K FVA  ++              V  + +E+DVV W++MIS +  +GL  + + L   
Sbjct: 326 CDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQM 385

Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQ-----THAY-LLRHGIHFEGMESYLIDMY 455
           M       +S+T  ++LSA S+      GK+     T  Y ++ + +H     S ++D+ 
Sbjct: 386 MVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVH----HSAMVDLL 441

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
            ++G ++ A ++   N  G  D  TW A++A 
Sbjct: 442 GRAGELQEAAKLLHGN--GRADAHTWCALLAA 471



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 185/387 (47%), Gaps = 37/387 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    AR+LF+ +T    V W+ ++ G+V +    EA+  Y +M ++      +  T  S
Sbjct: 141 GAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAG--IKPNAVTVVS 198

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V++AC+   ++  G+ VH   ++        V  +L++MY  C                 
Sbjct: 199 VVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKC----------------- 241

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
            S ++   ++F  M +++ VAW  ++S + +     E++R F+ ML  G  P  ++ V V
Sbjct: 242 -SCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKV 300

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S  G  + A  ++G LV  G  + + +FVA++ + +Y++ G    A ++F++ +E+
Sbjct: 301 LAACSESGVMRQAFCLHGYLVITG--FCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEK 358

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +  +W++MI GY  +    +A+ELF Q++    +  + +TF+S LSA S    +  G+++
Sbjct: 359 DVVLWSSMISGYGVHGLGQQAVELF-QMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRI 417

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSV 412
              + + +  +P          + V  + M+    + G   E   L++   +     D+ 
Sbjct: 418 FESMTQVYGVVP----------NAVHHSAMVDLLGRAGELQEAAKLLHGNGRA----DAH 463

Query: 413 TVTALLSAASNLRNQDVGKQTHAYLLR 439
           T  ALL+A     + ++ +   A LL+
Sbjct: 464 TWCALLAACRAHHDTEMSEVVAAKLLK 490



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 134/309 (43%), Gaps = 24/309 (7%)

Query: 18  TPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHL-ARQLFDSITRPTTVIWNTI 76
            P   +  ++H ++  I      T+ + L  +  +   H  A QLF  +++   V W  +
Sbjct: 206 APDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVV 265

Query: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           I GF  N LP E++ ++  M    P+   D  T   VL AC+E+  +R    +H + +  
Sbjct: 266 ISGFTQNGLPDESMRVFKCMLFGGPFP--DAVTMVKVLAACSESGVMRQAFCLHGYLVIT 323

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNT 196
                 FV  +L+++YS C                         +VF++   ++VV W++
Sbjct: 324 GFCDKIFVAAALVDLYSKC------------------GNLGCAVRVFESAMEKDVVLWSS 365

Query: 197 IVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLG 256
           ++S Y       +AV  F+MM+   ++P++++FV+V  A S  G  +    ++  + ++ 
Sbjct: 366 MISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVY 425

Query: 257 SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIEL 316
               N +   S+ + +    G    A K+       +   W  ++    + +H  E  E+
Sbjct: 426 GVVPNAVH-HSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAA-CRAHHDTEMSEV 483

Query: 317 F-VQVLELD 324
              ++L+LD
Sbjct: 484 VAAKLLKLD 492


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 196/601 (32%), Positives = 322/601 (53%), Gaps = 42/601 (6%)

Query: 224 PSTISFVNVFPAL-SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           P +    N F  L S  G   +A   + L     ++Y N +F  ++ I  YA+      A
Sbjct: 41  PPSTYLSNHFTLLYSKCGSLHNAQTSFHL-----TQYPN-VFSYNTLINAYAKHSLIHIA 94

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++FD   + +   +NT+I  Y         + LF +V EL  +  D  T    ++A   
Sbjct: 95  RRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVREL-RLGLDGFTLSGVITACGD 153

Query: 343 LQELDLGQQLHAYII--------------------KNFVALPVIVLNAVIE---RDVVSW 379
             ++ L +QLH +++                    K F++    V   + E   RD VSW
Sbjct: 154 --DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSW 211

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N MI A  Q+    E + L  EM ++G  +D  T+ ++L+A + +++   G+Q H  +++
Sbjct: 212 NAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIK 271

Query: 440 HGIHFEG-MESYLIDMYAK-SGLIKTARQIFEKNDSGDRDQATWNAMIAGYT-QNGLLEE 496
            G H    + S LID+Y+K +G +   R++FE+  + D     WN MI+G++    L E+
Sbjct: 272 SGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPD--LVLWNTMISGFSLYEDLSED 329

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLI 555
               FR+M  +   P+  +   V  AC+ + +  LGKQ+H  +I+  +  N V V  +L+
Sbjct: 330 GLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALV 389

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MYSK G ++ A  VF  +PE N+V+  +MI GY QHG+   +L LF  M    I P++I
Sbjct: 390 AMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSI 449

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+AVLSAC + G V+EG + F++M++ + I+P  EHY C+ D+LGR GK+ EA   ++ 
Sbjct: 450 TFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIET 509

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +      +E W +LLG+CR HG+ ELA   A + L ++  N+ P  +V+LSN+YA    W
Sbjct: 510 MPFNPGSIE-WATLLGACRKHGNVELAVKAANEFLRLEPYNAAP--YVMLSNMYASAARW 566

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           E    V++ MRERG++K+ GCSWI++   V+ F ++D  HP   +I+  + ++  +M+ A
Sbjct: 567 EEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQA 626

Query: 796 G 796
           G
Sbjct: 627 G 627



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/544 (28%), Positives = 265/544 (48%), Gaps = 71/544 (13%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG--L 166
           T+ ++LKAC   R+L  GK +H  + +    PS ++ N    +YS C S  +A+      
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 167 KYVEV--------DYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVK------TERYVE 209
           +Y  V         Y+K+ L+    +VFD + + ++V++NT+++ Y        T R  E
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV---NDLF-- 264
            VR+    LR+G+   T+S V     +++ GD    DV  GL+ +L    V   +D +  
Sbjct: 131 EVRE----LRLGLDGFTLSGV-----ITACGD----DV--GLVRQLHCFVVVCGHDCYAS 175

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLE---RNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           V ++ +  Y+  G    AR++F    E   R+   WN MI    Q+   +EA+ LF +++
Sbjct: 176 VNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMV 235

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI--------- 366
               +  D  T  S L+A + +++L  G+Q H  +IK      + V   +I         
Sbjct: 236 RRG-LKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGS 294

Query: 367 ------VLNAVIERDVVSWNTMISAF-VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
                 V   +   D+V WNTMIS F +   L ++GL    EMQ+ GF  D  +   + S
Sbjct: 295 MVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTS 354

Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           A SNL +  +GKQ HA  ++  + +    + + L+ MY+K G +  AR++F+     + +
Sbjct: 355 ACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP--EHN 412

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLH 536
             + N+MIAGY Q+G+  E+   F  MLE ++ PN +T  +VL AC   G +E G K  +
Sbjct: 413 TVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFN 472

Query: 537 GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMS 595
               R+ ++      + +ID+  ++G +  A  +   +P    S+ + T++    +HG  
Sbjct: 473 MMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNV 532

Query: 596 ERAL 599
           E A+
Sbjct: 533 ELAV 536



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 216/489 (44%), Gaps = 55/489 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H+AR++FD I +P  V +NT+I  +         + L+ ++++       D +T S V+ 
Sbjct: 92  HIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELR--LGLDGFTLSGVIT 149

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC +  ++ + + +HC  + C  +    V N++L  YS      +A              
Sbjct: 150 ACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEAR------------- 194

Query: 176 YDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                +VF  M     R+ V+WN ++    +    +EAV  FR M+R G++    +  +V
Sbjct: 195 -----RVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLE 291
             A + + D       +G+++K G  +  +  V S  I +Y++  G     RK+F+    
Sbjct: 250 LTAFTCVKDLVGGRQFHGMMIKSG--FHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA 307

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +  +WNTMI G+       E      + ++ +    DD +F+   SA S L    LG+Q
Sbjct: 308 PDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQ 367

Query: 352 LHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNG 390
           +HA  IK+ V    + +N  +                     E + VS N+MI+ + Q+G
Sbjct: 368 VHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHG 427

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGME- 448
           ++ E L L   M ++    +S+T  A+LSA  +    + G++    +  R  I  E    
Sbjct: 428 VEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHY 487

Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-- 506
           S +ID+  ++G +K A +I E     +     W  ++    ++G +E A  A  + L   
Sbjct: 488 SCMIDLLGRAGKLKEAERIIETMPF-NPGSIEWATLLGACRKHGNVELAVKAANEFLRLE 546

Query: 507 -HNVTPNVV 514
            +N  P V+
Sbjct: 547 PYNAAPYVM 555



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 37/215 (17%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  ++L AC    ++  GK LH    + L+  + ++      +YSK G ++ A   F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
              N  +Y T+I  Y +H +   A  +F  +     +PD +++  +++A +  G     L
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIP----QPDIVSYNTLIAAYADRGECGPTL 126

Query: 635 QIFD--------------------------LMQQEYKIQPSTEHYC------CVADMLGR 662
           ++F+                          L++Q +       H C       V     R
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFVVVCGHDCYASVNNAVLACYSR 186

Query: 663 VGKVVEAYEFVKELGEEGNVLEI-WGSLLGSCRLH 696
            G + EA    +E+GE G   E+ W +++ +C  H
Sbjct: 187 KGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 187/553 (33%), Positives = 300/553 (54%), Gaps = 31/553 (5%)

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLELD 324
           ++ + +YA+ G       +F+     +T V  W T+I    ++N P +A+  F + +   
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNR-MRTT 194

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN------FVALPVI------------ 366
            I  +  TF + L A +    L  GQQ+HA I K+      FVA  ++            
Sbjct: 195 GIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLA 254

Query: 367 --VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             V + +  R++VSWN+MI  FV+N L    + +  E+   G   D V+++++LSA + L
Sbjct: 255 ENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGL 312

Query: 425 RNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
              D GKQ H  +++ G +    +++ L+DMY K GL + A ++F     GDRD  TWN 
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLF--CGGGDRDVVTWNV 370

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           MI G  +    E+A   F+ M+   V P+  + +S+  A   +  +  G  +H   ++  
Sbjct: 371 MIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTG 430

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
             +N  + +SL+ MY K G +  A  VF +  E N V +T MI  + QHG +  A+ LF 
Sbjct: 431 HVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFE 490

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M   G+ P+ ITFV+VLSACS+ G +D+G + F+ M   + I+P  EHY C+ D+LGRV
Sbjct: 491 EMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRV 550

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G++ EA  F++ +  E + L +WG+LLG+C  H + E+   VA++L +++  N  PG ++
Sbjct: 551 GRLEEACRFIESMPFEPDSL-VWGALLGACGKHANVEMGREVAERLFKLEPDN--PGNYM 607

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIY   G  E  D+VR+ M   G+RKE GCSWIDV      F + D+ H ++ +IY 
Sbjct: 608 LLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYG 667

Query: 784 MLERLAMEMRNAG 796
           ML++L   ++  G
Sbjct: 668 MLQKLKELIKRRG 680



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 263/590 (44%), Gaps = 81/590 (13%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L   A+ ++L+    +H   +   ++ S    N+LL +Y+ C S        + +  + 
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGS--------IHHTLLL 154

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           ++ Y             NVV W T+++   ++ +  +A+  F  M   GI P+  +F  +
Sbjct: 155 FNTYP--------HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAI 206

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
            PA +          ++ L+ K    ++ND FVA++ + MYA+ G    A  +FD    R
Sbjct: 207 LPACAHAALLSEGQQIHALIHK--HCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR 264

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N   WN+MI G+V+N     AI +F +VL L     D V+  S LSA + L ELD G+Q+
Sbjct: 265 NLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP---DQVSISSVLSACAGLVELDFGKQV 321

Query: 353 HAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD 392
           H  I+K  +   V V N+++                    +RDVV+WN MI    +    
Sbjct: 322 HGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNF 381

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYL 451
           ++       M ++G   D  + ++L  A++++     G   H+++L+ G +    + S L
Sbjct: 382 EQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSL 441

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           + MY K G +  A Q+F   ++ + +   W AMI  + Q+G   EA   F +ML   V P
Sbjct: 442 VTMYGKCGSMLDAYQVFR--ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVP 499

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
             +T  SVL AC+  G I+ G        +Y                      N  ANV 
Sbjct: 500 EYITFVSVLSACSHTGKIDDG-------FKYF---------------------NSMANVH 531

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
              P      Y  M+   G+ G  E A     SM     EPD++ + A+L AC     V+
Sbjct: 532 NIKPGLEH--YACMVDLLGRVGRLEEACRFIESMP---FEPDSLVWGALLGACGKHANVE 586

Query: 632 EGLQIFDLMQQEYKIQPSTE-HYCCVADMLGRVGKVVEAYEFVKELGEEG 680
            G ++ + +   +K++P    +Y  ++++  R G + EA E  + +G  G
Sbjct: 587 MGREVAERL---FKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGING 633



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 224/469 (47%), Gaps = 54/469 (11%)

Query: 53  GRPHLARQLFDSITRPTT--VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
           G  H    LF++   P+T  V W T+I     +N P++A+  +++M+ +  Y   +++T+
Sbjct: 146 GSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYP--NHFTF 203

Query: 111 SSVLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           S++L ACA    L  G+ +H    + CF N   FV  +LL+MY+ C S L AE       
Sbjct: 204 SAILPACAHAALLSEGQQIHALIHKHCFLNDP-FVATALLDMYAKCGSMLLAE------- 255

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
                       VFD M  RN+V+WN+++  +VK + Y  A+  FR +L +G  P  +S 
Sbjct: 256 -----------NVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSI 302

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +V  A + L +      V+G +VK G   V  ++V +S + MY + G F+ A K+F   
Sbjct: 303 SSVLSACAGLVELDFGKQVHGSIVKRG--LVGLVYVKNSLVDMYCKCGLFEDATKLFCGG 360

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
            +R+   WN MI G  +  +  +A   F Q +  + +  D+ ++ S   A + +  L  G
Sbjct: 361 GDRDVVTWNVMIMGCFRCRNFEQACTYF-QAMIREGVEPDEASYSSLFHASASIAALTQG 419

Query: 350 QQLHAYIIK-----------NFVAL---------PVIVLNAVIERDVVSWNTMISAFVQN 389
             +H++++K           + V +            V     E +VV W  MI+ F Q+
Sbjct: 420 TMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQH 479

Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGME 448
           G  +E + L  EM  +G + + +T  ++LSA S+    D G K  ++    H I   G+E
Sbjct: 480 GCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIK-PGLE 538

Query: 449 SY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
            Y  ++D+  + G ++ A +  E     + D   W A++    ++  +E
Sbjct: 539 HYACMVDLLGRVGRLEEACRFIESMPF-EPDSLVWGALLGACGKHANVE 586



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 39/443 (8%)

Query: 26  QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
           QIH+L      L  P + + L  +  + G   LA  +FD +     V WN++I+GFV N 
Sbjct: 221 QIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280

Query: 85  LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
           L   AI ++ ++    P    D  + SSVL ACA    L  GK VH   ++       +V
Sbjct: 281 LYGRAIGVFREVLSLGP----DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYV 336

Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
            NSL++MY  C         GL         ++   K+F     R+VV WN ++    + 
Sbjct: 337 KNSLVDMYCKC---------GL---------FEDATKLFCGGGDRDVVTWNVMIMGCFRC 378

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
             + +A   F+ M+R G+ P   S+ ++F A +S+       +++  ++K G  +V +  
Sbjct: 379 RNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTG--HVKNSR 436

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           ++SS + MY + G    A ++F    E N   W  MI  + Q+    EAI+LF ++L  +
Sbjct: 437 ISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLN-E 495

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
            +V + +TF+S LSA S   ++D G        K F ++  +     I+  +  +  M+ 
Sbjct: 496 GVVPEYITFVSVLSACSHTGKIDDG-------FKYFNSMANV---HNIKPGLEHYACMVD 545

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              + G  +E    +  M    F  DS+   ALL A     N ++G++    L +     
Sbjct: 546 LLGRVGRLEEACRFIESMP---FEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDN 602

Query: 445 EGMESYLIDMYAKSGLIKTARQI 467
            G    L ++Y + G+++ A ++
Sbjct: 603 PGNYMLLSNIYIRHGMLEEADEV 625


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 191/562 (33%), Positives = 306/562 (54%), Gaps = 64/562 (11%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           F +A  +FD   E N  +WNTM  G+  ++ PV A++L++ ++ L  ++ D  TF   L 
Sbjct: 39  FPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLG-LLPDSYTFPFLLK 97

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------------- 373
           + ++ +    GQQ+H +++K    L + V  ++I                          
Sbjct: 98  SCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVS 157

Query: 374 --------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ-G 406
                                     +DVVSWN MIS +V+ G   E L L  EM     
Sbjct: 158 YTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTN 217

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTAR 465
              D  T+  ++SA +   + ++G+  H+++  HG      + + LID+Y+K G ++TA 
Sbjct: 218 VRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETAC 277

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
           ++F+     ++D  +WN +I GYT   L +EA + F++ML    TPN VT+ S+LPAC  
Sbjct: 278 ELFD--GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 335

Query: 526 MGNIELGKQLHGF---SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF-AKIPEKNSVT 581
           +G I++G+ +H +    ++ ++     + TSLIDMY+K G I+ A  VF + +  ++  T
Sbjct: 336 LGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLST 395

Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
           +  MI G+  HG +  A  +F  M+  GIEPD ITFV +LSACS++G++D G  IF  M 
Sbjct: 396 WNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMT 455

Query: 642 QEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL 701
           + Y+I P  EHY C+ D+LG  G   EA E +  +  E + + IW SLL +C++HG+ EL
Sbjct: 456 RGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGV-IWCSLLKACKIHGNLEL 514

Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV-GCSWID 760
            E  AKKL++++  NS  G +VLLSNIYA  G W  V K+R  + ++G++K+V GCS I+
Sbjct: 515 GESFAKKLIKIEPGNS--GSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIE 572

Query: 761 VGGYVNRFASKDQEHPQSHKIY 782
           +   V+ F   D+ HPQ+ +IY
Sbjct: 573 IDSVVHEFIIGDKLHPQNREIY 594



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/533 (26%), Positives = 266/533 (49%), Gaps = 71/533 (13%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           +  +     VFDT++  N++ WNT+   +  +   V A++ + +M+ +G+ P + +F  +
Sbjct: 36  FDGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFL 95

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             + +     K    ++G ++KLG +   D++V +S I MYA+ G  + ARK+FD    R
Sbjct: 96  LKSCAKSKIRKEGQQIHGHVLKLGFDL--DIYVHTSLISMYAQNGRLEDARKVFDISSHR 153

Query: 293 NT------------------------EV-------WNTMIGGYVQNNHPVEAIELFVQVL 321
           +                         E+       WN MI GYV+  +  EA+ELF +++
Sbjct: 154 DVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMM 213

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-------- 373
            +  +  D+ T ++ +SA +Q   ++LG+ +H++I  +  A  + ++NA+I+        
Sbjct: 214 MMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEV 273

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       +DV+SWNT+I  +    L  E L+L  EM + G   + VT+ ++L A 
Sbjct: 274 ETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 333

Query: 422 SNLRNQDVGKQTHAYLLR--HGI--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRD 477
           ++L   D+G+  H Y+ +   G+  +   +++ LIDMYAK G I  A+Q+F+ + S +R 
Sbjct: 334 AHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMS-NRS 392

Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-- 535
            +TWNAMI+G+  +G    AF  F +M  + + P+ +T   +L AC+  G ++LG+ +  
Sbjct: 393 LSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR 452

Query: 536 ---HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQ 591
               G+ I   L+        +ID+   SG+   A  +   +P E + V + +++     
Sbjct: 453 SMTRGYEITPKLEHY----GCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 508

Query: 592 HGMSERALSLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
           HG  E   S  + +    IEP ++ ++V + +  + AG  +E  +I  L+  +
Sbjct: 509 HGNLELGESFAKKL--IKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDK 559



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 258/583 (44%), Gaps = 90/583 (15%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +FD+I  P  +IWNT+  G   ++ P  A+ LY  M         D+YT+ 
Sbjct: 37  DGFPY-AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLP--DSYTFP 93

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++  + G+ +H H ++   +   +V+ SL++MY+      DA  V       
Sbjct: 94  FLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHR 153

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR-MM 217
           D   Y  +              K+FD +  ++VV+WN ++S YV+T  Y EA+  F+ MM
Sbjct: 154 DVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMM 213

Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
           +   +RP   + V V  A +     +    V+  +   G  + ++L + ++ I +Y++ G
Sbjct: 214 MMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHG--FASNLKIVNALIDLYSKFG 271

Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
             + A ++FD    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L
Sbjct: 272 EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP-NDVTMLSIL 330

Query: 338 SAVSQLQELDLGQQLHAYI-------IKNFVALPVIVLN-----------------AVIE 373
            A + L  +D+G+ +H YI       + N  +L   +++                 ++  
Sbjct: 331 PACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN 390

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
           R + +WN MIS F  +G  +    +   M+  G   D +T   LLSA S+    D+G+  
Sbjct: 391 RSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNI 450

Query: 434 HAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
              + R       +E Y  +ID+   SGL K A ++              N M       
Sbjct: 451 FRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMI-------------NTM------- 490

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLH--------GFSIRYL 543
                            + P+ V   S+L AC   GN+ELG+           G S  Y+
Sbjct: 491 ----------------PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYV 534

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
           L  N++      +  +K   +     +  K+P  +S+   +++
Sbjct: 535 LLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVV 577


>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 919

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 219/768 (28%), Positives = 372/768 (48%), Gaps = 40/768 (5%)

Query: 5   SVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRP-HLARQLFD 63
           S  L L     ++     + P +H L+     +   ++ + L  +  +G     A  +F 
Sbjct: 178 STTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFT 237

Query: 64  SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNL 123
            +     V WNTI+   + N  P  +++ +  M  S      DN T+S V+ AC+    L
Sbjct: 238 HMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQ--EADNVTFSCVISACSCLEEL 295

Query: 124 RIGKAVHCHFIRCFSNPSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCK 181
            +G+++H   I+   +P   V   NS+++MYS C     AE                   
Sbjct: 296 PLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAE------------------T 337

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLG 240
           VF+ +  ++V++WN I++       + EA    + M  +  I+P   + V++        
Sbjct: 338 VFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFC 397

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
             +    ++G  V+   +    L V +S I MY + G    A  +F     R+   WN+M
Sbjct: 398 LSREGRAIHGYTVRREMQS-RALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSM 456

Query: 301 IGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK- 358
           I  + QN    EA  LF +V+ E     F   T L+ L++      L  G+ +H ++ K 
Sbjct: 457 ISAFAQNGFTQEAKNLFREVVSEYTCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 516

Query: 359 NFVALPVIVLNAVIE-RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-FMIDSVTVTA 416
             +    ++L  + E RD+ SWN++I     +G   E L     M ++G    D +T+  
Sbjct: 517 GDLTSAFLLLEMIFETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 576

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
            +SA+ NLR    G+  H   ++     +  +++ LI MY +    ++A ++F      D
Sbjct: 577 TISASGNLRLVLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVF--GLISD 634

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
            +  +WN +I+  +QN    E F  FR +    + PN +T   +L A   +G+   G Q 
Sbjct: 635 PNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQA 691

Query: 536 HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMS 595
           H   IR     N FV  +L+DMYS  G++     VF     K+   + ++I  YG HGM 
Sbjct: 692 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMG 751

Query: 596 ERALSLFRSMKG--CGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
           E+A+ LF+ M     G+EP+  TF+++LSACS++G ++EGL+ ++ M++++ ++P TEH 
Sbjct: 752 EKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEHR 811

Query: 654 CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMD 713
            C+ DMLGR GK+ EAYEF+  +GE      +WG+LL +C  HG ++L   VA+ L EM+
Sbjct: 812 VCIVDMLGRAGKLKEAYEFIIGIGEPQKA-GVWGALLSACNYHGDTKLGTEVAEVLFEME 870

Query: 714 TRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
             N+   Y++ L+N Y   G W+   ++RK + +  L+K  G S IDV
Sbjct: 871 PDNA--SYYISLANTYVGLGGWDEAVRLRKIVEDNALKKLPGYSVIDV 916



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 120/468 (25%), Positives = 214/468 (45%), Gaps = 53/468 (11%)

Query: 259 YVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFV 318
           ++ DL  +S  + +Y   G    +  +F    E++  VWN+MI    QN   + A+ LFV
Sbjct: 108 FLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFV 167

Query: 319 QVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------ 372
           +++      FD  T L A+SA+S L        +H   I+  +     + NA++      
Sbjct: 168 EMIHKGN-EFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLCNALMNLYAKG 226

Query: 373 --------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
                          RD+VSWNT+++  + NG     L+    M   G   D+VT + ++
Sbjct: 227 EDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQEADNVTFSCVI 286

Query: 419 SAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGD 475
           SA S L    +G+  H  +++ G   E    + + +I MY+K G I+ A  +FE+     
Sbjct: 287 SACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAETVFEELLC-- 344

Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQ 534
           +D  +WNA++ G + NG+ EEAF   ++M     + P++ T+ S+   C        G+ 
Sbjct: 345 KDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDFCLSREGRA 404

Query: 535 LHGFSIRYLLDQNVF-VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
           +HG+++R  +      V  S+IDMY K G+   A  +F     ++ V++ +MI  + Q+G
Sbjct: 405 IHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNG 464

Query: 594 MSERALSLFR---SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
            ++ A +LFR   S   C  +    T +A+L++C  +  +  G  +   +Q         
Sbjct: 465 FTQEAKNLFREVVSEYTCS-KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ--------- 514

Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
                      ++G +  A+  + E+  E   L  W S++  C   GH
Sbjct: 515 -----------KLGDLTSAF-LLLEMIFETRDLTSWNSVIYGCASSGH 550



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 226/481 (46%), Gaps = 53/481 (11%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F  ++ ++V+ WN++++   +  RY+ AV  F  M+  G    + + +    ALSSL  
Sbjct: 134 LFGELKEKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHL 193

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            K   +V+ L ++ G   V+D  + ++ + +YA+      A  +F +   R+   WNT++
Sbjct: 194 SKKCPMVHCLAIETG--LVSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIM 251

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
              + N +P  ++  F  ++   +   D+VTF   +SA S L+EL LG+ LH  +IK+  
Sbjct: 252 TKCLANGYPRNSLIYFKSMIGSGQEA-DNVTFSCVISACSCLEELPLGESLHGLVIKSGY 310

Query: 362 A--LPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLV 399
           +    V V N++I                     +DV+SWN +++    NG+ +E   ++
Sbjct: 311 SPEAHVSVANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGIL 370

Query: 400 YEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYA 456
            EMQ       D  TV ++ S   +      G+  H Y +R  +    +E  + +IDMY 
Sbjct: 371 KEMQSVDKIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYG 430

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTP-NVV 514
           K GL   A  +F+   +  RD  +WN+MI+ + QNG  +EA   FR+++ E+  +  ++ 
Sbjct: 431 KCGLTTQAEFLFKT--TTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSKFSLS 488

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T+ ++L +C+   ++  GK +H +                     K G +  A  +   I
Sbjct: 489 TVLAILTSCDSSDSLIFGKSVHCW-------------------LQKLGDLTSAFLLLEMI 529

Query: 575 PEKNSVT-YTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDE 632
            E   +T + ++I G    G    +L  F++M   G I  D IT +  +SA     LV +
Sbjct: 530 FETRDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRLVLQ 589

Query: 633 G 633
           G
Sbjct: 590 G 590



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 8/335 (2%)

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           E+DV+ WN+MI+   QNG     + L  EM  +G   DS T+   +SA S+L        
Sbjct: 140 EKDVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPM 199

Query: 433 THAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQN 491
            H   +  G +    + + L+++YAK   + +A  +F   +   RD  +WN ++     N
Sbjct: 200 VHCLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHME--HRDIVSWNTIMTKCLAN 257

Query: 492 GLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVF 549
           G    + + F+ M+      + VT + V+ AC+ +  + LG+ LHG  I+  Y  + +V 
Sbjct: 258 GYPRNSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVS 317

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           V  S+I MYSK G I  A  VF ++  K+ +++  ++ G   +GM E A  + + M+   
Sbjct: 318 VANSIISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVD 377

Query: 610 -IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
            I+PD  T V++ S C    L  EG  I     +      + E    V DM G+ G   +
Sbjct: 378 KIQPDISTVVSITSICGDFCLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQ 437

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           A EF+ +     +++  W S++ +   +G ++ A+
Sbjct: 438 A-EFLFKTTTHRDLVS-WNSMISAFAQNGFTQEAK 470



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 158/343 (46%), Gaps = 19/343 (5%)

Query: 431 KQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           +  H + L+ G +      S L+ +Y ++G + ++  +F   +  ++D   WN+MI    
Sbjct: 97  RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLF--GELKEKDVIVWNSMITCLN 154

Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ---LHGFSIRYLLDQ 546
           QNG    A   F +M+      N     ++L A + + ++ L K+   +H  +I   L  
Sbjct: 155 QNGRYIAAVGLFVEMIHKG---NEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVS 211

Query: 547 NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
           +  +  +L+++Y+K   ++ A  VF  +  ++ V++ T++     +G    +L  F+SM 
Sbjct: 212 DSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMI 271

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL-MQQEYKIQPSTEHYCCVADMLGRVGK 665
           G G E D +TF  V+SACS    +  G  +  L ++  Y  +        +  M  + G 
Sbjct: 272 GSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGD 331

Query: 666 VVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLL 725
            +EA E V E     +V+  W ++L     +G  E A  + K++  +D         V +
Sbjct: 332 -IEAAETVFEELLCKDVIS-WNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSI 389

Query: 726 SNIYAE-----EGNWENVDKVRKEMRERGLRKEVGCSWIDVGG 763
           ++I  +     EG   +   VR+EM+ R L  EV  S ID+ G
Sbjct: 390 TSICGDFCLSREGRAIHGYTVRREMQSRAL--EVINSVIDMYG 430



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 51/96 (53%)

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
           E  + +H F+++    Q++   + L+ +Y ++G +  +  +F ++ EK+ + + +MI   
Sbjct: 94  ETPRSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCL 153

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            Q+G    A+ LF  M   G E D+ T +  +SA S
Sbjct: 154 NQNGRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALS 189


>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 191/553 (34%), Positives = 300/553 (54%), Gaps = 39/553 (7%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
           F F+R +F    + N   WN M   Y +++ P E I L+  +L  +  + D+ +F   L 
Sbjct: 77  FAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLR-NGTLPDNYSFPFVLK 135

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------------RDV 376
           A ++L  L  G+++H+  +K  V L V V NA+I                       RDV
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDV 195

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHA 435
           VSWN+MIS ++Q+   +  L + +E+   G +  D VT+ + LS    L   D+GK+ H 
Sbjct: 196 VSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHG 255

Query: 436 YLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
                G   +  + S LIDMY+K G I+ AR++F++     R+   W +MIAGY Q+ L 
Sbjct: 256 LFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIP--HRNTVCWTSMIAGYAQSDLF 313

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           +EA   FR+M       +  TIA VL AC   G +  G+ +H +  R  ++ ++    +L
Sbjct: 314 KEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNAL 373

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-IEPD 613
           I MYSK G I  A  +F  + + +  +++ +I G   +G S++AL LF  M+    I P+
Sbjct: 374 IGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPN 433

Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
            ITF+ VL AC++ G VD+GL  F+ M Q Y + P  EHY C+ D+LGR   +VEA +F+
Sbjct: 434 EITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFI 493

Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
           + L  + +V+ IW SLL +CR HG+ ELAE  AK++ E++ R    G  VLLSN+YA   
Sbjct: 494 RTLPIQPDVV-IWRSLLFACRNHGNIELAEFAAKQIEELEPRRC--GARVLLSNVYASAS 550

Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
            W +V +VRK+M  + ++K+ GCS++++ G V+     D+ HP+   IYE +  +     
Sbjct: 551 RWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISI----- 605

Query: 794 NAGNKTIQNSNVD 806
              NK +Q+   D
Sbjct: 606 ---NKALQSKGFD 615



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 249/541 (46%), Gaps = 56/541 (10%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIRSRL--SKICQEGRPHLARQLFDSITRPTTVIWNTIII 78
           P    QI S +      + P + S+L    +  +     +R LF  I +P    WN +  
Sbjct: 41  PRSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFR 100

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
            +  ++ P E I LY+ M ++   T  DNY++  VLKACA    L  G+ +H   ++   
Sbjct: 101 AYSRSSFPAETIALYNLMLRNG--TLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGV 158

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
           +   FV N+L++ +S+C +           VE   + +D++  +      R+VV+WN+++
Sbjct: 159 HLDVFVQNALISAFSSCGA-----------VEAARAVFDMLPALV-----RDVVSWNSMI 202

Query: 199 SWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           S Y+++ RY  A++ F  +L  G + P  ++ V+       LG       ++GL    GS
Sbjct: 203 SGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFT--GS 260

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            +V D+FV SS I MY++ G  + ARK+FD    RNT  W +MI GY Q++   EAIELF
Sbjct: 261 GFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELF 320

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----- 372
            + +++     D  T    LSA      L  G+ +H Y  +N + + +   NA+I     
Sbjct: 321 RE-MQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSK 379

Query: 373 ---------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFMIDSVTVTA 416
                          + D+ SW+ +IS    NG  D+ L L  +M+       + +T   
Sbjct: 380 CGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLG 439

Query: 417 LLSAASNLRNQDVG-----KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKN 471
           +L A ++    D G       T  Y L  GI   G    ++D+  ++ L+  A + F + 
Sbjct: 440 VLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGC---MVDLLGRANLLVEAEK-FIRT 495

Query: 472 DSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNI 529
                D   W +++     +G +E A  A +Q+  LE       V +++V  + +  G++
Sbjct: 496 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 555

Query: 530 E 530
           +
Sbjct: 556 K 556


>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  315 bits (806), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 298/533 (55%), Gaps = 29/533 (5%)

Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ 344
           +FD        +WNT+I G+  ++ P   +  + + L    ++ D  TF   L A S+L+
Sbjct: 60  LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSR-LRNHGVIPDRHTFPLLLKAFSKLR 118

Query: 345 ELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMIS 384
             +   Q +A+I+K  +     V N+++                    ++DVVSW  +I+
Sbjct: 119 NEN-PFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALIN 177

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG--I 442
             ++NG   E L    EM+  G  +D VT+ ++L AA+ LR+   G+  H + +  G  I
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
               + S L+DMY+K G    A ++F  N+   R+  +W A+IAGY Q    +EA   F+
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVF--NEMPTRNLVSWGALIAGYVQCNRYKEALKVFQ 295

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           +M+   + PN  T+ S L AC  +G+++ G+ LH +  R  L  N  +GT+L+DMYSK G
Sbjct: 296 EMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCG 355

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            ++ A  VF K+P K+   +T MI G    G +  +L+LF  M    ++P+ +TF+ VLS
Sbjct: 356 CVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLS 415

Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
           AC++ GLVDEGL++F LM  +Y+++P+ +HY C+ D+LGR G++ EA +F++ +  E   
Sbjct: 416 ACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTP 475

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
             +WG+L   C +H   EL E +   L+++   +S  G ++LL+N+Y+    WE    VR
Sbjct: 476 -GVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHS--GRYILLANLYSRCQKWEAAANVR 532

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           + M+ +G+ K  GCSWI+V G ++ F + D+ H +S  +Y MLE ++ +++ A
Sbjct: 533 RLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLKLA 585



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 29/417 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD +    +  WNTI+  +  + +    +  +  +   G+ P   +F  +  A S L +
Sbjct: 60  LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            ++    Y  +VK G ++  D FV +S +  +A  G  D +R++F    +++   W  +I
Sbjct: 120 -ENPFQFYAHIVKFGLDF--DAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALI 176

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-- 359
            G ++N   VEA+E FV+ +    +  D+VT +S L A + L+++  G+ +H + +++  
Sbjct: 177 NGCLRNGRAVEALECFVE-MRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGR 235

Query: 360 -------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
                              +    V V N +  R++VSW  +I+ +VQ     E L +  
Sbjct: 236 VIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQ 295

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
           EM  +G   +  TVT+ L+A + L + D G+  H Y+ R  +     + + L+DMY+K G
Sbjct: 296 EMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCG 355

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +  A  +FEK  +  +D   W AMI G    G    +   F QM+   V PN VT   V
Sbjct: 356 CVDEALLVFEKLPA--KDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGV 413

Query: 520 LPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           L AC   G ++ G +L    I  Y L+ NV     ++D+  ++G +  A      +P
Sbjct: 414 LSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMP 470



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 208/449 (46%), Gaps = 46/449 (10%)

Query: 61  LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET 120
           LFD +  P   +WNTII GF  ++ P   ++ YS+++        D +T+  +LKA ++ 
Sbjct: 60  LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIP--DRHTFPLLLKAFSKL 117

Query: 121 RNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
           RN    +  + H ++   +   FV NSL++ ++ C               VD S+     
Sbjct: 118 RNENPFQ-FYAHIVKFGLDFDAFVQNSLVSAFAHC-------------GYVDCSR----- 158

Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
           ++F    +++VV+W  +++  ++  R VEA+  F  M   G+    ++ V+V  A + L 
Sbjct: 159 RLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLR 218

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D      V+G  V+ G   + D++V S+ + MY++ G  D A K+F+    RN   W  +
Sbjct: 219 DVWFGRWVHGFYVESG-RVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGAL 277

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           I GYVQ N   EA+++F Q + ++ I  +  T  SAL+A +QL  LD G+ LH Y+ ++ 
Sbjct: 278 IAGYVQCNRYKEALKVF-QEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSK 336

Query: 361 VAL--------------------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           + L                     ++V   +  +DV  W  MI+     G     L L  
Sbjct: 337 LGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFS 396

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKS 458
           +M +     + VT   +LSA ++    D G +    ++        ++ Y  ++D+  ++
Sbjct: 397 QMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRA 456

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           G ++ A +  E     +     W A+ +G
Sbjct: 457 GRLEEAIKFIESMPM-EPTPGVWGALFSG 484



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 213/513 (41%), Gaps = 73/513 (14%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S +S     G    +R+LF    +   V W  +I G + N    EA+  + +M+ S    
Sbjct: 143 SLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSG--V 200

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYN-----SLLNMYSTCLSS 158
             D  T  SVL A A  R++  G+ VH  ++       R +++     +L++MYS C   
Sbjct: 201 EVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVE----SGRVIWDVYVGSALVDMYSKCGYC 256

Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
            DA                   KVF+ M  RN+V+W  +++ YV+  RY EA++ F+ M+
Sbjct: 257 DDA------------------VKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVY--------GLLVKLGSEYVNDLFVASSAI 270
             GI P+  +  +   A + LG       ++        GL  KLG+  V+         
Sbjct: 299 IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVD--------- 349

Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
            MY++ GC D A  +F+    ++   W  MI G       + ++ LF Q++    +  + 
Sbjct: 350 -MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIR-SRVQPNG 407

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
           VTFL  LSA +    +D G +L   +I ++           +E +V  +  M+    + G
Sbjct: 408 VTFLGVLSACAHGGLVDEGLELFRLMICDY----------RLEPNVDHYGCMVDLLGRAG 457

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
             +E +  +  M  +          AL S     +  ++G+    +L++   H  G    
Sbjct: 458 RLEEAIKFIESMPMEP---TPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYIL 514

Query: 451 LIDMYAKSGLIKTA---RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
           L ++Y++    + A   R++ +          +W  +      NG++ E F+AF +   H
Sbjct: 515 LANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEV------NGVIHE-FIAFDK--SH 565

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
             + NV  +   + A   +    L   L  F+I
Sbjct: 566 TESINVYMMLESVSAQLKLATYALDSNLLTFTI 598


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/531 (35%), Positives = 313/531 (58%), Gaps = 38/531 (7%)

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH--- 353
           WN++I    ++    EA+  F  + +L  +     +F  A+ A S L ++  G+Q H   
Sbjct: 44  WNSVIADLARSGDSAEALLAFSSMRKL-SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQA 102

Query: 354 ---AYIIKNFVALPVIVL--------------NAVIERDVVSWNTMISAFVQNG--LDDE 394
               Y    FV+  +IV+              + + +R++VSW +MI  +  NG  LD  
Sbjct: 103 FVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162

Query: 395 GL---MLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-- 448
            L   +LV E      M +DS+ + +++SA S +  + + +  H+++++ G    G+   
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD-RGVSVG 221

Query: 449 SYLIDMYAKSGL--IKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           + L+D YAK G   +  AR+IF++    D+D+ ++N++++ Y Q+G+  EAF  FR++++
Sbjct: 222 NTLLDAYAKGGEGGVAVARKIFDQ--IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279

Query: 507 HNV-TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
           + V T N +T+++VL A +  G + +GK +H   IR  L+ +V VGTS+IDMY K G + 
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            A   F ++  KN  ++T MI GYG HG + +AL LF +M   G+ P+ ITFV+VL+ACS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           +AGL  EG + F+ M+  + ++P  EHY C+ D+LGR G + +AY+ ++ +  + + + I
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSI-I 458

Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
           W SLL +CR+H + ELAE+   +L E+D+ N   GY++LLS+IYA+ G W++V++VR  M
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFELDSSNC--GYYMLLSHIYADAGRWKDVERVRMIM 516

Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + RGL K  G S +++ G V+ F   D+EHPQ  KIYE L  L  ++  AG
Sbjct: 517 KNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAG 567



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 229/443 (51%), Gaps = 37/443 (8%)

Query: 188 RRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
           + +V +WN++++   ++    EA+  F  M ++ + P+  SF     A SSL D  S   
Sbjct: 38  KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
            +      G  Y +D+FV+S+ I MY+  G  + ARK+FD   +RN   W +MI GY  N
Sbjct: 98  THQQAFVFG--YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFL------SALSAVSQLQELDLGQQLHAYIIK--- 358
            + ++A+ LF  +L +DE   DD  FL      S +SA S++    L + +H+++IK   
Sbjct: 156 GNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214

Query: 359 -------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
                                VA+   + + ++++D VS+N+++S + Q+G+ +E   + 
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274

Query: 400 YEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLIDMYAK 457
             + K   +  +++T++ +L A S+     +GK  H  ++R G+  + +  + +IDMY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
            G ++TAR+ F++    +++  +W AMIAGY  +G   +A   F  M++  V PN +T  
Sbjct: 335 CGRVETARKAFDRMK--NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392

Query: 518 SVLPACNPMG-NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
           SVL AC+  G ++E  +  +    R+ ++  +     ++D+  ++G +  A ++  ++  
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452

Query: 577 K-NSVTYTTMILGYGQHGMSERA 598
           K +S+ +++++     H   E A
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELA 475



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 205/442 (46%), Gaps = 45/442 (10%)

Query: 371 VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
           V + DV SWN++I+   ++G   E L+    M+K        +    + A S+L +   G
Sbjct: 36  VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95

Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
           KQTH      G   +  + S LI MY+  G ++ AR++F+  +   R+  +W +MI GY 
Sbjct: 96  KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD--EIPKRNIVSWTSMIRGYD 153

Query: 490 QNGLLEEAFVAFRQML------EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
            NG   +A   F+ +L      +  +  + + + SV+ AC+ +    L + +H F I+  
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213

Query: 544 LDQNVFVGTSLIDMYSKSGV--INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
            D+ V VG +L+D Y+K G   +  A  +F +I +K+ V+Y +++  Y Q GMS  A  +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273

Query: 602 FRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD---LMQQEYKIQPSTEHYCCVA 657
           FR + K   +  +AIT   VL A S++G +  G  I D    M  E  +   T     + 
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTS----II 329

Query: 658 DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNS 717
           DM  + G+V  A +    +  +   +  W +++    +HGH+  A  +   +++   R  
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKN--VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR-- 385

Query: 718 MPGYHVLLS--------NIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            P Y   +S         ++ E   W N  K R  + E GL +  GC  +D+ G      
Sbjct: 386 -PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV-EPGL-EHYGC-MVDLLGRAGFL- 440

Query: 770 SKDQEHPQSHKIYEMLERLAME 791
                     K Y++++R+ M+
Sbjct: 441 ---------QKAYDLIQRMKMK 453



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 228/506 (45%), Gaps = 65/506 (12%)

Query: 42  IRSRLSKICQEGR-----PHLARQ----LFDSITRPTTVI-WNTIIIGFVCNNLPYEAIL 91
           +RS+ +  C   R      H  RQ    LF+     T V  WN++I     +    EA+L
Sbjct: 3   VRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62

Query: 92  LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNM 151
            +S M+K S Y +    ++   +KAC+   ++  GK  H            FV ++L+ M
Sbjct: 63  AFSSMRKLSLYPT--RSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120

Query: 152 YSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAV 211
           YSTC    DA                   KVFD + +RN+V+W +++  Y      ++AV
Sbjct: 121 YSTCGKLEDAR------------------KVFDEIPKRNIVSWTSMIRGYDLNGNALDAV 162

Query: 212 RQFRMML------RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
             F+ +L         +   ++  V+V  A S +      + ++  ++K G  +   + V
Sbjct: 163 SLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG--FDRGVSV 220

Query: 266 ASSAIFMYAE--LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
            ++ +  YA+   G    ARKIFD  ++++   +N+++  Y Q+    EA E+F ++++ 
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---------- 373
             + F+ +T  + L AVS    L +G+ +H  +I+  +   VIV  ++I+          
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340

Query: 374 ----------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                     ++V SW  MI+ +  +G   + L L   M   G   + +T  ++L+A S+
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400

Query: 424 LRNQDVG-KQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
                 G +  +A   R G+   G+E Y  ++D+  ++G ++ A  + ++      D   
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVE-PGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM-KPDSII 458

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLE 506
           W++++A    +  +E A ++  ++ E
Sbjct: 459 WSSLLAACRIHKNVELAEISVARLFE 484


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/627 (29%), Positives = 336/627 (53%), Gaps = 71/627 (11%)

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN--VFPALSSLGDYKSADVVYG 250
           A+  +V   V+T    +A R    M     +P T SF++  +    +  G  + A  ++ 
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQP-TDSFLHNQLLHLYAKFGKLRDAQNLFD 82

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            ++K       D+F  ++ +  YA+ G     +  FD    R++  +NT I G+  N+ P
Sbjct: 83  KMLK------RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLN 369
            E++ELF + ++ +     + T +S L+A +QL +L  G+Q+H  II +NF+   V + N
Sbjct: 137 QESLELF-KRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLG-NVFIWN 194

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           A+ +                    +++VSWN MIS + +NG  ++ + L+++M+  G M 
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D VT++ +++A                                  Y + G +  AR++F 
Sbjct: 255 DQVTMSTIIAA----------------------------------YCQCGRVDEARRVF- 279

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
            ++  ++D   W AM+ GY +NG  E+A + F +ML  ++ P+  T++SV+ +C  + ++
Sbjct: 280 -SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G+ +HG SI   L+ N+ V ++LIDMYSK G I+ A +VF  +P +N V++  MI+G 
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGC 398

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            Q+G  + AL LF +M     +PD +TF+ +LSAC +   +++G + FD +  ++ + P+
Sbjct: 399 AQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPT 458

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ ++LGR G++ +A   +K +  + + L IW +LL  C   G    AEV A+ L
Sbjct: 459 LDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFL-IWSTLLSICSTKGDIVNAEVAARHL 517

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            E+D   ++P  +++LSN+YA  G W++V  VR  M+ + ++K  G SWI++   V+RF 
Sbjct: 518 FELDPTIAVP--YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFT 575

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S+D+ HP+S  IYE L  L  +++  G
Sbjct: 576 SEDRTHPESEDIYEKLNMLIGKLQEEG 602



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 245/535 (45%), Gaps = 68/535 (12%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTCLSSLDAEMVGLK 167
            Y+ ++  C  T  +   K +  H       P+  F++N LL++Y+      DA+ +  K
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83

Query: 168 YVEVDYSKYDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
            ++ D   ++ +                FD M  R+ V++NT ++ +       E++  F
Sbjct: 84  MLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           + M R G  P+  + V++  A + L D +    ++G ++     ++ ++F+ ++   MYA
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIV--RNFLGNVFIWNALTDMYA 201

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G  + AR +FD   ++N   WN MI GY +N  P + I L  Q + L   + D VT  
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ-MRLSGHMPDQVTMS 260

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           + ++A  Q   +D  ++               V +   E+D+V W  M+  + +NG +++
Sbjct: 261 TIIAAYCQCGRVDEARR---------------VFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
            L+L  EM  +    DS T+++++S+ + L +   G+  H   +  G++   +  S LID
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I  AR +F  N    R+  +WNAMI G  QNG  ++A   F  ML+    P+ 
Sbjct: 366 MYSKCGFIDDARSVF--NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT   +L AC     IE G++                  S+ + +  +  +++       
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYF---------------DSITNQHGMTPTLDH------- 461

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
                   Y  M+   G+ G  E+A++L ++M     +PD + +  +LS CS  G
Sbjct: 462 --------YACMVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKG 505



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 180/435 (41%), Gaps = 63/435 (14%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G     +  FD +    +V +NT I GF  N+ P E++ L+ +M++     + 
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT- 154

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------- 155
             YT  S+L A A+  +LR GK +H   I      + F++N+L +MY+ C          
Sbjct: 155 -EYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF 213

Query: 156 -----------------------------------LSSLDAEMVGLKYVEVDY---SKYD 177
                                              LS    + V +  +   Y    + D
Sbjct: 214 DCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVD 273

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF   + +++V W  ++  Y K  R  +A+  F  ML   I P + +  +V  + +
Sbjct: 274 EARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCA 333

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        V+G  +  G    N+L V+S+ I MY++ G  D AR +F+    RN   W
Sbjct: 334 KLASLHHGQAVHGKSILAGLN--NNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G  QN H  +A+ELF  +L+  +   D+VTF+  LSA      ++ GQ+    I 
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSACLHCNWIEQGQEYFDSIT 450

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                 P +   A           M++   + G  ++ + L+  M      +   T+ ++
Sbjct: 451 NQHGMTPTLDHYAC----------MVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSI 500

Query: 418 LSAASNLRNQDVGKQ 432
            S   ++ N +V  +
Sbjct: 501 CSTKGDIVNAEVAAR 515



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 20/195 (10%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+ + ++  CQ GR   AR++F        V W  +++G+  N    +A+LL+++M    
Sbjct: 258 TMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE- 316

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
            +   D+YT SSV+ +CA+  +L  G+AVH   I    N +  V ++L++MYS C    D
Sbjct: 317 -HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDD 375

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                    VF+ M  RNVV+WN ++    +     +A+  F  ML+ 
Sbjct: 376 AR------------------SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 221 GIRPSTISFVNVFPA 235
             +P  ++F+ +  A
Sbjct: 418 KFKPDNVTFIGILSA 432


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 213/715 (29%), Positives = 361/715 (50%), Gaps = 65/715 (9%)

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           Y   L++CA   +L    AVH H  R   +PS F+ N+LL  Y   L + D         
Sbjct: 16  YLHHLRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCR-LGAGDTHQAR---- 67

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTIS 228
                      ++ D M RRN V++N ++  Y +  +  E++  F    R   ++    +
Sbjct: 68  -----------RLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFT 116

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           +     A S  G  K   VV+ L V  G      +FV++S + MYA  G    AR++FD 
Sbjct: 117 YAAALAACSRAGRLKEGKVVHALAVLEG--LAEGVFVSNSLVSMYARCGDMGEARRVFDV 174

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALS--AVSQ 342
             ER+   WN+++ GY++     E + +F  +    + L+      V    +    +V  
Sbjct: 175 TEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRG 234

Query: 343 LQELDLGQQLHA---------------YIIKNFVALPVIVLNAVIERDVVSWNTMIS--- 384
           + E   G  + A               Y  +  ++  V +  +V++ +VV +N MI+   
Sbjct: 235 IAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLC 294

Query: 385 ---AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
              A V   +  E L L  E+Q +G      T ++++ A +   + + GKQ H  +L+H 
Sbjct: 295 RDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHC 354

Query: 442 IHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
             F+G   + S LID+Y  S  ++   + F       +D  TW AMI+G  QN L E A 
Sbjct: 355 --FQGDDFIGSALIDLYFNSACMEDGFRCFRSVPK--QDVVTWTAMISGCVQNELFERAL 410

Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
             F ++L   + P+  TI+SV+ AC  +  +  G+Q+  F+ +   D+   +G S I MY
Sbjct: 411 ALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMY 470

Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
           ++SG +  A   F ++   + V+++ +I  + QHG + +AL  F  M G  + P+ ITF+
Sbjct: 471 ARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFL 530

Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE-LG 677
            VL+ACS+ GLVDEGL+ +++M+ EY + P+ +H  CV D+LGR G++ +A  F+++ + 
Sbjct: 531 GVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIF 590

Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
            +  V  +W SLLGSCR+H   E  ++VA +++E+   +S  G +V L N+Y + G    
Sbjct: 591 HDEPV--VWQSLLGSCRIHRDMERGQLVADRIMELQPASS--GCYVNLYNMYLDAGELSL 646

Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY----EMLERL 788
             K+R  M+ERG++KE G SWI++   ++ F + D+ HP+ + IY    EML ++
Sbjct: 647 GSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKI 701



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 281/576 (48%), Gaps = 62/576 (10%)

Query: 24  LPQIHSLSPPIPKLK-TPTIRSR---LSKICQ--EGRPHLARQLFDSITRPTTVIWNTII 77
           LPQ  ++   I +   +P++  R   L+  C+   G  H AR+L D + R   V +N +I
Sbjct: 26  LPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLI 85

Query: 78  IGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
             +       E++  +    +++   + D +TY++ L AC+    L+ GK VH   +   
Sbjct: 86  DAYSRAGQTEESLETFLHAHRAAEVKA-DRFTYAAALAACSRAGRLKEGKVVHALAVLEG 144

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
                FV NSL++MY+ C    +A                   +VFD    R+ V+WN++
Sbjct: 145 LAEGVFVSNSLVSMYARCGDMGEAR------------------RVFDVTEERDDVSWNSL 186

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS---ADVVYGLLVK 254
           VS Y++   + E +R F +M R  +  ++ +  +V    S  GD      A+ V+G +VK
Sbjct: 187 VSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSG-GDGSVRGIAEAVHGCVVK 245

Query: 255 LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV--- 311
            G +   DLF+AS+ + MYA+ G    A  +F + L+ N  V+N MI G  ++   V   
Sbjct: 246 AGLD--TDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKE 303

Query: 312 ---EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVA 362
              EA+ L+ + L+   +   + TF S + A +   +++ G+Q+H  ++K      +F+ 
Sbjct: 304 VVREALSLYSE-LQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG 362

Query: 363 LPVIVL--------------NAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
             +I L               +V ++DVV+W  MIS  VQN L +  L L +E+   G  
Sbjct: 363 SALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLK 422

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQI 467
            D  T++++++A ++L     G+Q   +  + G   F  M +  I MYA+SG ++ A Q 
Sbjct: 423 PDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQR 482

Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
           F++ +S   D  +W+A+I+ + Q+G   +A   F +M+   V PN +T   VL AC+  G
Sbjct: 483 FQEMES--HDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGG 540

Query: 528 NIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSG 562
            ++ G + +    + Y L   V   T ++D+  ++G
Sbjct: 541 LVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAG 576


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/558 (33%), Positives = 300/558 (53%), Gaps = 60/558 (10%)

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
             +A  IF+   E N  +WNTM  G+  N+  V A++L+V ++ L  ++ +  +F   L 
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLG-LLPNSYSFPFLLK 73

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------------- 373
           + ++ + L  GQQ+H +++K    L + V  ++I                          
Sbjct: 74  SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133

Query: 374 --------------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
                                     +DVVSWN MIS +V+     E L L  +M K   
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193

Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
             D  T+  ++SA +   + ++G+Q H+++  HG      + + LID+Y+K G ++TA  
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
           +F+      +D  +WN +I G+T   L +EA + F++ML    +PN VT+ SVLPAC  +
Sbjct: 254 LFQ--GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311

Query: 527 GNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
           G I++G+ +H +  + L  +     + TSLIDMY+K G I  A  VF  +  ++  ++  
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371

Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
           MI G+  HG +  A  LF  M+  GI+PD ITFV +LSACS++G++D G  IF  M Q+Y
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 431

Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
           KI P  EHY C+ D+LG  G   EA E ++ +  E + + IW SLL +C++H + EL E 
Sbjct: 432 KITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGV-IWCSLLKACKMHNNVELGES 490

Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
            A+ L++++  N  PG +VLLSNIYA  G W+ V K+R  + ++G++K  GCS I++   
Sbjct: 491 YAQNLIKIEPEN--PGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSV 548

Query: 765 VNRFASKDQEHPQSHKIY 782
           V+ F   D+ HP++ +IY
Sbjct: 549 VHEFIIGDKFHPRNREIY 566



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 256/559 (45%), Gaps = 106/559 (18%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +F+T++  N++ WNT+   +      V A++ +  M+ +G+ P++ SF  +  + +    
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-------CFDF------------- 281
                 ++G ++KLG  Y  D++V +S I MYA+ G        FD              
Sbjct: 81  LIEGQQIHGHVLKLG--YDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALI 138

Query: 282 -----------ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
                      ARK+FD    ++   WN MI GYV+  +  EA+EL+  +++ + +  D+
Sbjct: 139 TGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN-VKPDE 197

Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------------- 373
            T ++ +SA +Q   ++LG+QLH++I  +     + ++N +I+                 
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257

Query: 374 ---RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
              +DV+SWNT+I       L  E L+L  EM + G   + VT+ ++L A ++L   D+G
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317

Query: 431 KQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           +  H Y+   L+   +   + + LIDMYAK G I+ A+Q+F+   +  R  ++WNAMI G
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLT--RSLSSWNAMIFG 375

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           +  +G    AF  F +M ++ + P+ +T   +L AC+  G ++LG+              
Sbjct: 376 FAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH------------- 422

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTTMILGYGQHGMSERALSLF 602
                                 +F  + +   +T     Y  MI   G  G+ + A  + 
Sbjct: 423 ----------------------IFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMI 460

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTE-HYCCVADMLG 661
           R+M    +EPD + + ++L AC     V+ G       Q   KI+P     Y  ++++  
Sbjct: 461 RTMP---MEPDGVIWCSLLKACKMHNNVELGES---YAQNLIKIEPENPGSYVLLSNIYA 514

Query: 662 RVGKVVEAYEFVKELGEEG 680
             G+  +  +    L ++G
Sbjct: 515 TAGRWDQVAKIRTLLNDKG 533



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 229/521 (43%), Gaps = 83/521 (15%)

Query: 55  PHL-----ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
           PH      A  +F++I  P  +IWNT+  G   N+    A+ LY  M         ++Y+
Sbjct: 10  PHFDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLP--NSYS 67

Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           +  +LK+CA+++ L  G+ +H H ++   +   +V  SL++MY+      DA  V  +  
Sbjct: 68  FPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSS 127

Query: 170 EVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                 Y  +              K+FD +  ++VV+WN ++S YV+T  + EA+  ++ 
Sbjct: 128 HRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKD 187

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
           M++  ++P   + V V  A +  G  +    ++  +   G  + +++ + +  I +Y++ 
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG--FGSNIKIVNVLIDLYSKC 245

Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSA 336
           G  + A  +F    +++   WNT+IGG+   N   EA+ LF ++L   E   +DVT LS 
Sbjct: 246 GEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP-NDVTMLSV 304

Query: 337 LSAVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIER 374
           L A + L  +D+G+ +H YI K                        +     V ++++ R
Sbjct: 305 LPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTR 364

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
            + SWN MI  F  +G  +    L  +M+K G   D +T   LLSA S+    D+G+   
Sbjct: 365 SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF 424

Query: 435 AYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
             + +       +E Y  +ID+    GL K A+++                         
Sbjct: 425 RSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM------------------------- 459

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
                    R M    + P+ V   S+L AC    N+ELG+
Sbjct: 460 --------IRTM---PMEPDGVIWCSLLKACKMHNNVELGE 489



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 38/404 (9%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD I+    V WN +I G+V      EA+ LY  M K++     D  T  +V+ AC
Sbjct: 150 ARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN--VKPDESTMVTVVSAC 207

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A++ ++ +G+ +H          +  + N L+++YS C                   + +
Sbjct: 208 AQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC------------------GEVE 249

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
             C +F  + +++V++WNT++  +     Y EA+  F+ MLR G  P+ ++ ++V PA +
Sbjct: 250 TACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 309

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            LG       ++  + K      N   + +S I MYA+ G  + A+++FD+ L R+   W
Sbjct: 310 HLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSW 369

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI G+  +     A +LF ++ + + I  DD+TF+  LSA S    LDLG+ +   + 
Sbjct: 370 NAMIFGFAMHGKANAAFDLFSKMRK-NGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS 428

Query: 358 KNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
           +++   P           +  +  MI      GL  E   ++  M  +    D V   +L
Sbjct: 429 QDYKITP----------KLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEP---DGVIWCSL 475

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLI--DMYAKSG 459
           L A     N ++G+     L++  I  E   SY++  ++YA +G
Sbjct: 476 LKACKMHNNVELGESYAQNLIK--IEPENPGSYVLLSNIYATAG 517



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 24/191 (12%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G    A  LF  + +   + WNT+I G    NL  EA+LL+ +M +S    S ++ T  S
Sbjct: 246 GEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE--SPNDVTMLS 303

Query: 113 VLKACAETRNLRIGKAVHCHF---IRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           VL ACA    + IG+ +H +    ++  +N S  +  SL++MY+ C              
Sbjct: 304 VLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLL-TSLIDMYAKC-------------G 349

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
           +++ +K     +VFD+M  R++ +WN ++  +    +   A   F  M + GI P  I+F
Sbjct: 350 DIEAAK-----QVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 404

Query: 230 VNVFPALSSLG 240
           V +  A S  G
Sbjct: 405 VGLLSACSHSG 415


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 321/610 (52%), Gaps = 70/610 (11%)

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFD---FARKIF 286
           P+LS L + K   S  +++  ++K G    N    A S +  +  L   FD   +A  +F
Sbjct: 4   PSLSLLHNCKTLQSLRMIHAQMIKTGLHNTN---YALSKLIEFCVLSPHFDGLPYAISVF 60

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           +   E N  +WNTM  G+  ++ PV A+ L+V ++ L  ++ +  TF   L + ++ +  
Sbjct: 61  ETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG-LLPNCYTFPFLLKSCAKSKAF 119

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------------------- 373
             GQQ+H +++K    L + V  ++I                                  
Sbjct: 120 REGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGY 179

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             +DVVSWN MIS + + G + E L L  EM K     D  T+ 
Sbjct: 180 ASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMV 239

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSG 474
           +++SA +   + ++G+Q H+++  HG      + + LID+Y K G ++TA  +FE     
Sbjct: 240 SVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY- 298

Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
            +D  +WN +I GYT   L +EA + F++ML    +PN VT+ S+LPAC  +G IE+G+ 
Sbjct: 299 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357

Query: 535 LHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
           +H +  + L  +       TSLIDMY+K G I  A  VF  I  ++  ++  MI G+  H
Sbjct: 358 IHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMH 417

Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH 652
           G +  A  +F  M+   IEPD ITFV +LSACS++G++D G  IF  M+++YKI P  EH
Sbjct: 418 GRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEH 477

Query: 653 YCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEM 712
           Y C+ D+LG  G   EA E +  +  E + + IW SLL +C+++ + EL E  A+ L+++
Sbjct: 478 YGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-IWCSLLKACKMYANVELGESYAQNLIKI 536

Query: 713 DTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKD 772
           + +N  PG +VLLSNIYA  G W  V K+R  + ++G++K  GCS I++   V+ F   D
Sbjct: 537 EPKN--PGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 594

Query: 773 QEHPQSHKIY 782
           + HP++ +IY
Sbjct: 595 KFHPRNREIY 604



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/634 (24%), Positives = 285/634 (44%), Gaps = 124/634 (19%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGL 166
           N+   S+L  C   ++LR+   +H   I+   + + +  + L+     C+  L     GL
Sbjct: 2   NHPSLSLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEF---CV--LSPHFDGL 53

Query: 167 KYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
            Y             VF+T++  N++ WNT+   +  +   V A+  +  M+ +G+ P+ 
Sbjct: 54  PYA----------ISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNC 103

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
            +F  +  + +    ++    ++G ++KLG  Y  DL+V +S I MY + G  + ARK+F
Sbjct: 104 YTFPFLLKSCAKSKAFREGQQIHGHVLKLG--YDLDLYVHTSLISMYVQNGRLEDARKVF 161

Query: 287 DNCLERNT------------------------EV-------WNTMIGGYVQNNHPVEAIE 315
           D    R+                         E+       WN MI GY +  +  EA+E
Sbjct: 162 DQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALE 221

Query: 316 LFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE-- 373
           LF ++++ + +  D+ T +S +SA +Q   ++LG+Q+H++I  +     + ++NA+I+  
Sbjct: 222 LFKEMMKTN-VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLY 280

Query: 374 ------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
                             +DV+SWNT+I  +    L  E L+L  EM + G   + VT+ 
Sbjct: 281 IKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTML 340

Query: 416 ALLSAASNLRNQDVGKQTHAYL---LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKND 472
           ++L A ++L   ++G+  H Y+   L+   +     + LIDMYAK G I+ A+Q+F+   
Sbjct: 341 SILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD--S 398

Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
             +R  ++WNAMI G+  +G    AF  F +M ++ + P+ +T   +L AC+  G ++LG
Sbjct: 399 ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG 458

Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTTMIL 587
           +                                    +F  + E   +T     Y  MI 
Sbjct: 459 RH-----------------------------------IFRSMKEDYKITPKLEHYGCMID 483

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
             G  G+ + A  +  +M+   +EPD + + ++L AC     V+ G       Q   KI+
Sbjct: 484 LLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMYANVELGES---YAQNLIKIE 537

Query: 648 PSTE-HYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           P     Y  ++++    G+  E  +    L ++G
Sbjct: 538 PKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKG 571



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 247/563 (43%), Gaps = 80/563 (14%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           +G P+ A  +F++I  P  +IWNT+  G   ++ P  A+ LY  M       +C  YT+ 
Sbjct: 51  DGLPY-AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNC--YTFP 107

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
            +LK+CA+++  R G+ +H H ++   +   +V+ SL++MY       DA  V  +    
Sbjct: 108 FLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHR 167

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D   Y  +              K+FD +  ++VV+WN ++S Y +T    EA+  F+ M+
Sbjct: 168 DVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMM 227

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
           +  +RP   + V+V  A +     +    V+  +   G  + ++L + ++ I +Y + G 
Sbjct: 228 KTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG--FGSNLKIVNALIDLYIKCGE 285

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
            + A  +F+    ++   WNT+IGGY   N   EA+ LF ++L   E   +DVT LS L 
Sbjct: 286 VETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP-NDVTMLSILP 344

Query: 339 AVSQLQELDLGQQLHAYIIKNF----------------------VALPVIVLNAVIERDV 376
           A + L  +++G+ +H YI K                        +     V ++++ R +
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404

Query: 377 VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAY 436
            SWN MI  F  +G  +    +   M+K     D +T   LLSA S+    D+G+     
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464

Query: 437 LLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +         +E Y  +ID+   SGL K A ++              N M          
Sbjct: 465 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMI-------------NTM---------- 501

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
                         + P+ V   S+L AC    N+ELG+      I+ +  +N      L
Sbjct: 502 -------------EMEPDGVIWCSLLKACKMYANVELGESYAQNLIK-IEPKNPGSYVLL 547

Query: 555 IDMYSKSGVINYAANVFAKIPEK 577
            ++Y+ +G  N  A + A + +K
Sbjct: 548 SNIYATAGRWNEVAKIRALLNDK 570


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/765 (26%), Positives = 388/765 (50%), Gaps = 53/765 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD +     V W  ++  +  N    +A+   S+M         +  T+ +++  C
Sbjct: 112 AEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKP--NQVTFVTIVDVC 169

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A+ R L +G+ +H   I     P   + N+L++MY +C S                  +D
Sbjct: 170 AKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGS------------------FD 211

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
            +  VF  M + +V+ W T+++   +  +Y E +  FR M   G++ + ++++++     
Sbjct: 212 DMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCR 271

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           +L   K  +++   +++  S + +   +A+S I +Y + G  D A+ + ++  +R+   W
Sbjct: 272 NLDAVKEGEMIDARILE--SPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAW 329

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N M+    QN    EAI L ++ ++++    + VT+LS L A + L+ L  G+++HA ++
Sbjct: 330 NAMVTACAQNGDNWEAIHL-LRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVL 388

Query: 358 K-NFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
               +   V V N+VI                     +D VSWN +I+A V N    + L
Sbjct: 389 LCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDAL 448

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDM 454
            L + M+ +G   +  T+ +LL A   L +  + +Q HA     G   +   + + +++M
Sbjct: 449 ELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNM 508

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ--NGLLEEAFVAFRQMLEHNVTPN 512
           YA+ G +  A++ F+  +  ++    W+ ++A Y Q  +G    AF  F++M    + P 
Sbjct: 509 YARCGSLLDAKKAFDSLE--EKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPG 566

Query: 513 VVTIASVLPACNPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
            VT  S L AC  M  +E G+ +H   +    ++ ++ +G ++I+MY K G  + A  VF
Sbjct: 567 EVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVF 626

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            ++PEK  +++ ++I+ Y  +G +  ALS  + M   G +PD+ T V++L   S+AGL++
Sbjct: 627 DQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLE 686

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
            G++ F    Q++ ++PS+    C+ D+L R G +  A E +            W +LL 
Sbjct: 687 RGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLA 746

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +C+ +G  +     A+++ E++ ++S  G  V+L+N+YA  G W +  ++RK M    ++
Sbjct: 747 ACKSYGDPQRGIRCAERVFELEPQHS--GSFVVLANLYASVGRWSDASRIRKMMERMSVK 804

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           KE GCSWI++ G V+ F S + +HP+  +I E LE+L + MR AG
Sbjct: 805 KEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAG 849



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 168/667 (25%), Positives = 306/667 (45%), Gaps = 52/667 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A  +FD I+      W  ++  +  N    EA+ L+++M+     T  D   +   L AC
Sbjct: 11  ALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEG--TRPDKVVFVIALDAC 68

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A +  L  G+ +H   +      +  + NSL+NMY  C     AE               
Sbjct: 69  AASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAE--------------- 113

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              KVFD M  R+VV+W  +++ Y +   + +A+     M   G++P+ ++FV +    +
Sbjct: 114 ---KVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCA 170

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        ++  ++  G E   D  + ++ + MY   G FD  + +F    + +  +W
Sbjct: 171 KLRLLDLGRKIHHRIINEGLE--PDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLW 228

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            TMI G  QN    E + +F + ++L+ +  ++VT++S +     L  +  G+ + A I+
Sbjct: 229 TTMIAGCSQNGQYEEGLLVFRK-MDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARIL 287

Query: 358 KN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
           ++       +A  +I              +L  + +RDVV+WN M++A  QNG + E + 
Sbjct: 288 ESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIH 347

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMY 455
           L+  M  +GF  + VT  ++L A +NL     G++ HA +L  G+      + + +I MY
Sbjct: 348 LLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMY 407

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
            K G  + A  +FE      +D  +WNA+I     N   ++A   F  M    +  N  T
Sbjct: 408 GKCGQTEAAMSVFEAMPR--KDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFT 465

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKI 574
           + S+L AC  + +++L +Q+H  +       N   VG S+++MY++ G +  A   F  +
Sbjct: 466 LLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSL 525

Query: 575 PEKNSVTYTTMILGYGQH--GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
            EK  V ++ ++  Y Q   G   RA   F+ M+  GI+P  +TFV+ L AC+    ++ 
Sbjct: 526 EEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEH 585

Query: 633 GLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGS 692
           G  +         ++ S      + +M G+ G   +A     ++ E+   L  W SL+ +
Sbjct: 586 GRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEK--CLISWNSLIVA 643

Query: 693 CRLHGHS 699
              +GH+
Sbjct: 644 YAHNGHA 650



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 204/438 (46%), Gaps = 36/438 (8%)

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY +      A  +FD    +N   W  M+  Y QN H  EA+ELF + ++ +    D V
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTR-MQWEGTRPDKV 59

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------ 373
            F+ AL A +   ELD G+Q+H+ ++ + +   +I+ N+++                   
Sbjct: 60  VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119

Query: 374 --RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
             RDVVSW  M++ + QNG   + L  +  M  +G   + VT   ++   + LR  D+G+
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
           + H  ++  G+  +G + + L+ MY   G     + +F +   G      W  MIAG +Q
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSR--MGQSSVLLWTTMIAGCSQ 237

Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           NG  EE  + FR+M    V  N VT  S++  C  +  ++ G+ +    +      +  +
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLL 297

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
            TSLI +Y + G+++ A  +   + +++ V +  M+    Q+G +  A+ L R M   G 
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGF 357

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIF------DLMQQEYKIQPSTEHYCCVADMLGRVG 664
             + +T+++VL AC+    + +G +I        L+Q+E  +  S      V  M G+ G
Sbjct: 358 GANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNS------VITMYGKCG 411

Query: 665 KVVEAYEFVKELGEEGNV 682
           +   A    + +  + +V
Sbjct: 412 QTEAAMSVFEAMPRKDDV 429


>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
           chloroplastic-like [Vitis vinifera]
          Length = 635

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/630 (32%), Positives = 335/630 (53%), Gaps = 81/630 (12%)

Query: 171 VDYSKYDLVCKVFDTMRRR--NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
           V++++Y  + + F    R+  N   WN I+  +   E   EA   F +ML  G+     S
Sbjct: 65  VEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFS 124

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  V  A S LG  K    ++GLL ++  E  +D+F+ +  + +Y   GC   AR++FD 
Sbjct: 125 FSLVLKACSRLGLIKEGMQIHGLLGRM--EIGSDVFLQNCLMCLYLRCGCLGIARQLFDR 182

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
            ++R++  +N+MI GYV++     A ELF  V+ +++                       
Sbjct: 183 MMKRDSVSFNSMIDGYVKHGMVKSARELF-DVMPMEQ----------------------- 218

Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
                                    ++++SWN+MIS + ++   +EGL + +E+ ++   
Sbjct: 219 -------------------------KNLISWNSMISGYARS---EEGLRVAWELFEEMPK 250

Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQ 466
            D ++  +++           GK  +A+ L + +    + S+  ++D YAK G I  AR 
Sbjct: 251 RDLISWNSMIDGCVK-----CGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARG 305

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNP 525
           +F+  +  +RD  + NAM+AGY QNG L EA   F  ML    + P+  T+   L A   
Sbjct: 306 LFD--EMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQ 363

Query: 526 MGNIELGKQLH------GFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           +G+ + G  LH      GFS+   L      G +LIDMY+K G I+ A +VF  I +K+ 
Sbjct: 364 LGHFDEGVALHCYIEDNGFSLSEKL------GVALIDMYAKCGSIDNALSVFEDIDDKSI 417

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
             +  +I G   HG+ E A  LF  M+   ++PD ITF+ VL+AC++AGLV EGL  F+L
Sbjct: 418 DHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFEL 477

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M++ +K++P  +HY C+ D+LGR G V EA +FV+++  E N + +W +LL +CR H + 
Sbjct: 478 MRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDV-VWRTLLSACRNHENF 536

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
            + E VAK L+ +D+ N  P  +VLLSNIYA  G W +V ++R  M++R L+K  GCS I
Sbjct: 537 TIGEPVAKHLISVDSYN--PSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQI 594

Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           ++ G V+ F  +D+ HPQ  +IY ML+ L+
Sbjct: 595 ELEGNVHEFFVRDKSHPQVREIYSMLDSLS 624



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 130/531 (24%), Positives = 226/531 (42%), Gaps = 84/531 (15%)

Query: 2   ASSSVPLPLPPPPPTATPPPPQLP---QIHSLSPPIPKLKTPTIRSRL----SKICQEGR 54
           A+S+ P     P     P    L    QIHS       +  P++ +R+    S    +  
Sbjct: 5   ATSNQPWNSTHPTLILLPKSKTLHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPL 64

Query: 55  PHLARQLFDSI-------TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDN 107
              AR LF S         +    +WN II  F     P EA ++++ M ++      D 
Sbjct: 65  VEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENG--VCVDK 122

Query: 108 YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           +++S VLKAC+    ++ G  +H    R       F+ N L+ +Y  C     A  +  +
Sbjct: 123 FSFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDR 182

Query: 168 YVEVD----------YSKYDLVC---KVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVR 212
            ++ D          Y K+ +V    ++FD M   ++N+++WN+++S Y ++E   E +R
Sbjct: 183 MMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSE---EGLR 239

Query: 213 QFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
               +     +   IS+ ++       G  ++A  ++  + K       D+   ++ +  
Sbjct: 240 VAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPK------RDVVSWANMVDG 293

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           YA+LG  D AR +FD   ER+    N M+ GYVQN H +EA+  F  +L   E+  D+ T
Sbjct: 294 YAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNAT 353

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVAL--------------------PVIVLNAVI 372
            L  LSA++QL   D G  LH YI  N  +L                     + V   + 
Sbjct: 354 LLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDID 413

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
           ++ +  WN +I     +GL +    L  EM+K     D +T   +L+A +          
Sbjct: 414 DKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACN---------- 463

Query: 433 THAYLLRHGIH-FEGMESY------------LIDMYAKSGLIKTARQIFEK 470
            HA L++ G+  FE M               ++D+  ++G ++ A++  EK
Sbjct: 464 -HAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEK 513



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 153/300 (51%), Gaps = 32/300 (10%)

Query: 432 QTHAYLLRHG-IHFEGMESYLIDMYAKSG---LIKTARQIFEKNDSGDRDQAT-----WN 482
           Q H+ L+  G I+   + + +I  ++ S    L++ AR +F     G + +       WN
Sbjct: 32  QIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDNPFLWN 91

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           A+I  ++      EAFV F  MLE+ V  +  + + VL AC+ +G I+ G Q+HG   R 
Sbjct: 92  AIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLGRM 151

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            +  +VF+   L+ +Y + G +  A  +F ++ +++SV++ +MI GY +HGM + A  LF
Sbjct: 152 EIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELF 211

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI----FDLMQQEYKIQPSTEHYCCVAD 658
             M     + + I++ +++S  + +   +EGL++    F+ M +   I  ++    CV  
Sbjct: 212 DVMP--MEQKNLISWNSMISGYARS---EEGLRVAWELFEEMPKRDLISWNSMIDGCV-- 264

Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV-VAKKLL-EMDTRN 716
              + GK+  A+    ++ +   V   W +++      G+++L E+ +A+ L  EM  R+
Sbjct: 265 ---KCGKMENAHHLFNQMPKRDVV--SWANMVD-----GYAKLGEIDIARGLFDEMPERD 314



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/338 (21%), Positives = 133/338 (39%), Gaps = 61/338 (18%)

Query: 23  QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
           ++   H L   +PK    +  + +    + G   +AR LFD +     +  N ++ G+V 
Sbjct: 268 KMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQ 327

Query: 83  NNLPYEAILLYSQM---KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
           N    EA+  +  M   K+  P    DN T    L A A+  +   G A+HC+      +
Sbjct: 328 NGHLMEALNFFHDMLSRKELFP----DNATLLITLSAIAQLGHFDEGVALHCYIEDNGFS 383

Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
            S  +  +L++MY+ C S                   D    VF+ +  +++  WN I+ 
Sbjct: 384 LSEKLGVALIDMYAKCGS------------------IDNALSVFEDIDDKSIDHWNAIIG 425

Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
                     A   F  M ++ ++P  I+F+ V  A +  G           LVK G   
Sbjct: 426 GLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAG-----------LVKEG--- 471

Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
                           L CF+  R++    +E   + +  M+    +  H VE  + FV+
Sbjct: 472 ----------------LMCFELMRRVHK--VEPKLQHYGCMVDILGRAGH-VEEAKKFVE 512

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
            + ++    +DV + + LSA    +   +G+ +  ++I
Sbjct: 513 KMPIEP---NDVVWRTLLSACRNHENFTIGEPVAKHLI 547


>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 611

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 198/653 (30%), Positives = 334/653 (51%), Gaps = 50/653 (7%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+ C+  ++L  GK +H            F+   L+ MY+ C     A+          
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQ---------- 50

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++FD M + NV AW  I  +Y++   Y + V+ +  M    + P    F  V
Sbjct: 51  --------RLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKV 102

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A + L  ++    ++  ++  G E  ++L V +S I MY + G    AR +F+   ER
Sbjct: 103 LRACTQLLWFEGGIWIHKDVIVCGCE--SNLQVCNSLIDMYVKCGNARSARLVFEEMEER 160

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN+MI GYV N     A+EL +  + LD    D VT+ + + A  Q+   D   + 
Sbjct: 161 DLFSWNSMISGYVSNGLADLAVEL-LNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWE- 218

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ-KQGFMIDS 411
                         VL  + + +++SW T+IS++ + G  D  L +  +M  ++    D 
Sbjct: 219 --------------VLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDL 264

Query: 412 VTVTALLSAASNLRNQDVGKQTHAY---LLRHGIHFEGMESYLIDMYAKSGLIKTARQIF 468
             + ++L +  ++     GK+ H Y   +  + + +    + L+ MYAK G I+ A  +F
Sbjct: 265 DCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVF 324

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           E  D  D    TWNAMI G+ +  L ++A   FR+M   ++  +  TI+++LP C+    
Sbjct: 325 ELMDKSD--IVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD---- 378

Query: 529 IELGKQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
           ++ G  +H +  + + L   V V  ++I MY K G +  A  +F  +P K+ V++ TMI 
Sbjct: 379 LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIG 438

Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
           G+G HG  + AL L + M   GI P++ TF +VLSACS++GLVDEG ++F  M ++Y I 
Sbjct: 439 GFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSIT 498

Query: 648 PSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAK 707
           P  EHY C+ DML R G+  +A  F+ ++  E +   IWG+LL +CR + + +   + A+
Sbjct: 499 PRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDK-SIWGALLAACRAYQNLDFGRLAAE 557

Query: 708 KLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           +L+ M+ + +  G++V LSNIYA  G W++  +VRKE+  +GL K  G S I+
Sbjct: 558 QLIRMEPKCA--GHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIE 608



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 229/537 (42%), Gaps = 84/537 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILL-YSQMKKSSPYTSCDNYTYSSVLKA 116
           A++LFD + +P    W T I GF   +  Y+  +  Y  MK S      DNY +  VL+A
Sbjct: 49  AQRLFDKMPQPNVYAW-TAIFGFYLRHGMYDKCVQNYGFMKYSDVLP--DNYVFPKVLRA 105

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C +      G  +H   I C    +  V NSL++MY  C ++  A +V  +  E D   +
Sbjct: 106 CTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSW 165

Query: 177 -------------DLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEA--------- 210
                        DL  ++ + MR      +VV WNT++  Y +  R+ EA         
Sbjct: 166 NSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQ 225

Query: 211 ----------------------VRQFR-MMLRMGIRPSTISFVNVFPALSSLGDYKSADV 247
                                 +R F+ M++R  + P      +V  +   +G  +S   
Sbjct: 226 PNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKE 285

Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
           ++G   K+ +  V      ++ + MYA+ G    A  +F+   + +   WN MI G+V+ 
Sbjct: 286 IHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVEL 345

Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI- 366
           +   +AIE F ++  +D  + +D T +S +  V  LQ    G  +HAY+ K+     V+ 
Sbjct: 346 DLGKQAIECFREMQRMD--IKNDQTTISTILPVCDLQ---YGNPIHAYVRKSITLSSVVT 400

Query: 367 VLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
           V NAVI                     +DVVSWNTMI  F  +G     L L+ EM   G
Sbjct: 401 VWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSG 460

Query: 407 FMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTA 464
              +S T T++LSA S+    D G +    +         ME Y  ++DM A++G    A
Sbjct: 461 IFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADA 520

Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASV 519
                K    + D++ W A++A       L+   +A  Q+  +E     + VT++++
Sbjct: 521 VTFIHKMPL-EPDKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNI 576



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 182/436 (41%), Gaps = 54/436 (12%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM---K 97
           T  + +   CQ GR   A ++   I +P  + W T+I  +        ++ ++  M   +
Sbjct: 199 TWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIRE 258

Query: 98  KSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF--VYNSLLNMYSTC 155
             SP   C      SVL +C     LR GK +H +  +  +N   +     +LL MY+ C
Sbjct: 259 VVSPDLDC----LCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKC 314

Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
               DA                    VF+ M + ++V WN ++  +V+ +   +A+  FR
Sbjct: 315 GRIQDA------------------INVFELMDKSDIVTWNAMILGFVELDLGKQAIECFR 356

Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG----LLVKLGSEYVNDLFVASSAIF 271
            M RM I+    +   + P           D+ YG      V+      + + V ++ I 
Sbjct: 357 EMQRMDIKNDQTTISTILPV---------CDLQYGNPIHAYVRKSITLSSVVTVWNAVIH 407

Query: 272 MYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDV 331
           MY + GC   A  IF +   ++   WNTMIGG+  + H   A++L  +++ L  I  +  
Sbjct: 408 MYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMI-LSGIFPNST 466

Query: 332 TFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGL 391
           TF S LSA S    +D G +L   + +++   P           +  ++ ++    + G 
Sbjct: 467 TFTSVLSACSHSGLVDEGFRLFRSMTEDYSITP----------RMEHYSCIVDMLARAGQ 516

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYL 451
             + +  +++M  +    D     ALL+A    +N D G+     L+R      G    L
Sbjct: 517 FADAVTFIHKMPLEP---DKSIWGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTL 573

Query: 452 IDMYAKSGLIKTARQI 467
            ++YA++G    A ++
Sbjct: 574 SNIYARAGRWDDAGRV 589


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/673 (30%), Positives = 343/673 (50%), Gaps = 52/673 (7%)

Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
           L ACA   +L     +H   +R       FV   L+ + ++  +  D     ++Y     
Sbjct: 24  LDACASRAHL---AELHGRLVRAHLTSDSFVAGRLIALLASPAARHD-----MRYAR--- 72

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
                  KVFD M + N   WN ++  Y   E   +A+  FR M R G+ P   +   V 
Sbjct: 73  -------KVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVV 125

Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
            A ++    K   + D ++ L+ ++G  + +D+FV S  +  Y        A K+F+   
Sbjct: 126 SASAAFAGLKWRSNGDAIHALVRRIG--FTSDVFVMSGLVNYYGAFRSVKEASKVFEEMY 183

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ER+   W +MI    Q  H  + +++  + ++ + I+ + VT +S LSA  Q Q +D G+
Sbjct: 184 ERDVVSWTSMISACAQCGHWDKVLKMLSE-MQAEGIIPNKVTIISLLSACGQTQAVDEGR 242

Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
            ++  + K  +   V + NA+I                     R   SWNT+I  FVQN 
Sbjct: 243 WVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNH 302

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MES 449
              E L +  EM   G   D +T+ ++LSA + L     G   H+Y+  +GI  +  + +
Sbjct: 303 EHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTN 362

Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
            LI+MYAK G +  A ++F+      +D  +W  M+ GY +      AF  F +M    V
Sbjct: 363 SLINMYAKCGDMAAAERVFQTMTK--KDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEV 420

Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
             + + + S+L AC+ +G ++ G+++H +     + +++ + ++L+DMY+K G I+ A+ 
Sbjct: 421 VAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASE 480

Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAG 628
           +F K+  K ++++  MI G   +G  + A+ LF  M +    +PD IT  AVL AC++ G
Sbjct: 481 IFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVG 540

Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
           +VDEGL+ F LM     + P TEHY C+ D+LGR G + EA+ F+K++  E N + IWGS
Sbjct: 541 MVDEGLRYFYLMSS-LGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPV-IWGS 598

Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
           LL +CR+H   +L +V+ + ++ +   +   G HVL+SN++AEE  W++V+ VR  M  R
Sbjct: 599 LLAACRVHHRMDLGKVIGQHIVNVAPND--VGVHVLVSNLHAEESQWDDVEHVRGLMGSR 656

Query: 749 GLRKEVGCSWIDV 761
           G+ K  G S + V
Sbjct: 657 GIEKTPGHSSVQV 669



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 271/560 (48%), Gaps = 61/560 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD + +P   +WN +I G+     P +A+ ++ +M++     S DNYT ++V+ A 
Sbjct: 71  ARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRG--VSPDNYTMAAVVSAS 128

Query: 118 AETRNLRI---GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
           A    L+    G A+H    R       FV + L+N Y    S  +A             
Sbjct: 129 AAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEAS------------ 176

Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
                 KVF+ M  R+VV+W +++S   +   + + ++    M   GI P+ ++ +++  
Sbjct: 177 ------KVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLS 230

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A            VY  + K G E   D+ + ++ I MY + GC   A + F     R T
Sbjct: 231 ACGQTQAVDEGRWVYNQVGKFGIE--ADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
           + WNT+I G+VQN+   EA+ +F ++L L  +  D +T +S LSA +QL EL  G  +H+
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEML-LHGVTPDGITLVSVLSACAQLGELRKGMHVHS 347

Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
           YI  N +    I+ N++I                    ++DVVSW  M+  +V+      
Sbjct: 348 YIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTM 407

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLID 453
              L  EM+    +   + + +LLSA S L   D G++ H+Y+    +  +  +ES L+D
Sbjct: 408 AFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVD 467

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPN 512
           MYAK G I TA +IF K     +   +WNAMI G   NG  +EA   F QMLE  +  P+
Sbjct: 468 MYAKCGCIDTASEIFRKMQH--KQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPD 525

Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS-----LIDMYSKSGVINYA 567
            +T+ +VL AC  +G ++      G    YL+     V  +     ++D+  ++G+++ A
Sbjct: 526 GITLKAVLGACAHVGMVD-----EGLRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEA 580

Query: 568 ANVFAKIP-EKNSVTYTTMI 586
            +   K+P E N V + +++
Sbjct: 581 FHFIKKMPIEPNPVIWGSLL 600


>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
 gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 178/537 (33%), Positives = 297/537 (55%), Gaps = 36/537 (6%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
           A K+FD   E N  +WN M  GY QN    + I LF Q+  LD ++ +  TF   L +  
Sbjct: 4   AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLD-VMPNCFTFPVILKSCV 62

Query: 342 QLQELDLGQQLHAYIIKN------FVALPVI--------------VLNAVIERDVVSWNT 381
           ++  L  G+++H ++IK+      FVA  +I              V   +IER+V++W  
Sbjct: 63  KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV-GKQTHAYLLRH 440
           MI+ ++          L     ++  ++ +  ++  + A   +R +++  K  +  ++  
Sbjct: 123 MINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSW 182

Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
                G        YA +G +    ++FE  +  +R+  +WNA+I GYT+NG   E   A
Sbjct: 183 NTVLNG--------YASNGDVMACERLFE--EMPERNVFSWNALIGGYTRNGCFSEVLSA 232

Query: 501 FRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           F++ML +  V PN  T+ +VL AC  +G ++LGK +H ++  +    NV+V  +L+DMY+
Sbjct: 233 FKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYA 292

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K GV+  A +VF  +  K+ +++ T+I G   HG    AL+LF  MK  G  PD ITF+ 
Sbjct: 293 KCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIG 352

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           +L AC++ GLV++G   F  M  +Y I P  EHY C+ D+LGR G +  A +F++++  E
Sbjct: 353 ILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIE 412

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            + + IW +LLG+CR++ + ELAE+  +KL+E + +N  P  +V+LSNIY + G W++V 
Sbjct: 413 ADAV-IWAALLGACRVYKNVELAELALEKLIEFEPKN--PANYVMLSNIYGDFGRWKDVA 469

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +++  MR+ G +K  GCS I+V  Y+  F S D+ HP+  +IY  L  L   +R++G
Sbjct: 470 RLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSG 526



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 208/476 (43%), Gaps = 63/476 (13%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A ++FD I  P   IWN +  G+  N    + I+L+ QMK      +C  +T+  +LK+C
Sbjct: 4   AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNC--FTFPVILKSC 61

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
            +   L+ G+ VHC  I+     + FV  +L++MY++  +           +   Y    
Sbjct: 62  VKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGA-----------IHAAY---- 106

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF  M  RNV+AW  +++ Y+     V A R F +     I         V     
Sbjct: 107 ---RVFGEMIERNVIAWTAMINGYITCCDLVTARRLFDLAPERDI---------VLWNTM 154

Query: 238 SLGDYKSADVVYG--LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
             G  ++ DV+    L  K+ ++   D+   ++ +  YA  G      ++F+   ERN  
Sbjct: 155 ISGYIEAKDVIRARELFDKMPNK---DVMSWNTVLNGYASNGDVMACERLFEEMPERNVF 211

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN +IGGY +N    E +  F ++L    +V +D T ++ LSA ++L  LDLG+ +H Y
Sbjct: 212 SWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVY 271

Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
              +     V V NA+++                    +D++SWNT+I     +G   + 
Sbjct: 272 AESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADA 331

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-----KQTHAYLLRHGIHFEGMESY 450
           L L   M+  G   D +T   +L A +++   + G       T  Y +   I   G    
Sbjct: 332 LNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGC--- 388

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
           ++D+  ++GL+  A     K    + D   W A++        +E A +A  +++E
Sbjct: 389 IVDLLGRAGLLAHAVDFIRKMPI-EADAVIWAALLGACRVYKNVELAELALEKLIE 443



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 109/288 (37%), Gaps = 47/288 (16%)

Query: 30  LSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEA 89
           L   +P     +  + L+     G      +LF+ +       WN +I G+  N    E 
Sbjct: 170 LFDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEV 229

Query: 90  ILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLL 149
           +  + +M         D  T  +VL ACA    L +GK VH +        + +V N+L+
Sbjct: 230 LSAFKRMLVDGTVVPNDA-TLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALM 288

Query: 150 NMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVE 209
           +MY+ C         G+    +D         VF +M  +++++WNTI+          +
Sbjct: 289 DMYAKC---------GVVETALD---------VFKSMDNKDLISWNTIIGGLAVHGHGAD 330

Query: 210 AVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           A+  F  M   G  P  I+F+ +  A + +G           LV+ G  Y   +    S 
Sbjct: 331 ALNLFSHMKIAGENPDGITFIGILCACTHMG-----------LVEDGFSYFKSMTDDYSI 379

Query: 270 IFMYAELGCF--------------DFARKIFDNCLERNTEVWNTMIGG 303
           +      GC               DF RK+    +E +  +W  ++G 
Sbjct: 380 VPRIEHYGCIVDLLGRAGLLAHAVDFIRKM---PIEADAVIWAALLGA 424


>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
 gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
           Group]
 gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
 gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
          Length = 651

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 176/521 (33%), Positives = 288/521 (55%), Gaps = 55/521 (10%)

Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------- 373
           D +TF   L A ++L+E   G    A++++  +   V V+NA                  
Sbjct: 124 DHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLF 183

Query: 374 -----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRN 426
                RD+VSWNT+I  +V+ G   E L L + M  +  ++  D VT+ A +S    +R+
Sbjct: 184 DRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRD 243

Query: 427 QDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK--------------- 470
            ++G++ H ++   G+     + + L+DMY K G ++ A+ +FE+               
Sbjct: 244 LELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVG 303

Query: 471 --------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
                         ++  +RD   WNA++ GY Q    +EA   F +M E +V P+ +T+
Sbjct: 304 FAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITM 363

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
            ++L AC+ +G +E+G  +H +  ++ L  +V +GTSLIDMY+K G I  A ++F +IPE
Sbjct: 364 VNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPE 423

Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           KN++T+T MI G   HG +  A+  FR+M   G +PD ITF+ VLSAC +AGLV EG + 
Sbjct: 424 KNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREF 483

Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
           F LM+ +Y ++   +HY C+ D+LGR G + EA + V  +  E + + +WG++  +CR+ 
Sbjct: 484 FSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAV-VWGAIFFACRMQ 542

Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
           G+  L E  A KL+E+D  +S  G +VLL+N+YAE    +  DKVR  MR  G+ K  GC
Sbjct: 543 GNISLGEKAAMKLVEIDPSDS--GIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGC 600

Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
           S I++ G V+ F  KD+ H  SH IY+ L  + +++++  +
Sbjct: 601 SCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKHTAD 641



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 193/424 (45%), Gaps = 31/424 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+LFD       V WNT+I G+V    P EA+ L+ +M         D  T  + +  C
Sbjct: 179 ARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGC 238

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE------- 170
            + R+L +G+ +H        + +  + N+L++MY  C  SL+      + +E       
Sbjct: 239 GQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKC-GSLEMAKSVFERIEHRTVVSW 297

Query: 171 ----VDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
               V ++K+ L+    KVFD M  R+V  WN +++ YV+ ++  EA+  F  M    + 
Sbjct: 298 TTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVV 357

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
           P  I+ VN+  A S LG  +    V+  + K     V  + + +S I MYA+ G  + A 
Sbjct: 358 PDEITMVNLLTACSQLGALEMGMWVHRYIEK--HRLVFSVALGTSLIDMYAKCGNIEKAI 415

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
            IF    E+N   W  MI G   + H  EAIE F  ++EL +   D++TF+  LSA    
Sbjct: 416 HIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKP-DEITFIGVLSACCHA 474

Query: 344 QELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
             +  G++  + +   +           +ER +  ++ MI    + G  DE   LV  M 
Sbjct: 475 GLVKEGREFFSLMETKY----------HLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMP 524

Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKT 463
            +    D+V   A+  A     N  +G++    L+       G+   L +MYA++ + K 
Sbjct: 525 MEP---DAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKK 581

Query: 464 ARQI 467
           A ++
Sbjct: 582 ADKV 585



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 201/510 (39%), Gaps = 116/510 (22%)

Query: 79  GFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFS 138
           G V   LP    LL S   +       D+ T+  +LKACA  R    G A   H +R   
Sbjct: 103 GVVRRCLPLYRALLRSGTARP------DHLTFPFLLKACARLREWGYGDAALAHVLRLGL 156

Query: 139 NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV 198
           +   FV N+  +  S      DA                   ++FD    R++V+WNT++
Sbjct: 157 DSDVFVVNAATHFLSIRGPMEDAR------------------RLFDRSPVRDLVSWNTLI 198

Query: 199 SWYVKTERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLL---- 252
             YV+     EA+  F  M+     +RP  ++ +        + D +    ++G +    
Sbjct: 199 GGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDG 258

Query: 253 ---------------VKLGS--------EYVNDLFVAS--SAIFMYAELGCFDFARKIFD 287
                          +K GS        E +    V S  + I  +A+ G  D ARK+FD
Sbjct: 259 VSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFD 318

Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
              ER+   WN ++ GYVQ     EA+ LF ++ E   +V D++T ++ L+A SQL  L+
Sbjct: 319 EMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEA-SVVPDEITMVNLLTACSQLGALE 377

Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
           +G  +H YI K+ +   V +  ++I                    E++ ++W  MI    
Sbjct: 378 MGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLA 437

Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
            +G  +E +     M + G   D +T   +LSA  +                        
Sbjct: 438 NHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCH------------------------ 473

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSG---DRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
                     +GL+K  R+ F   ++    +R    ++ MI    + G L+EA      M
Sbjct: 474 ----------AGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTM 523

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
               + P+ V   ++  AC   GNI LG++
Sbjct: 524 ---PMEPDAVVWGAIFFACRMQGNISLGEK 550



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 51/231 (22%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGF-----------VCNNLP--------------- 86
           G   +A+ +F+ I   T V W T+I+GF           V + +P               
Sbjct: 277 GSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYV 336

Query: 87  -----YEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS 141
                 EA+ L+ +M+++S     D  T  ++L AC++   L +G  VH +  +     S
Sbjct: 337 QCKQCKEALSLFHEMQEASVVP--DEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFS 394

Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
             +  SL++MY+ C                     +    +F  +  +N + W  ++   
Sbjct: 395 VALGTSLIDMYAKC------------------GNIEKAIHIFKEIPEKNALTWTAMICGL 436

Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLL 252
                  EA+  FR M+ +G +P  I+F+ V  A    G  K     + L+
Sbjct: 437 ANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLM 487



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 15/157 (9%)

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT-PNVVTIASVLPACNPMGNI 529
           +D GDR              +G++      +R +L      P+ +T   +L AC  +   
Sbjct: 94  SDDGDRHG------------HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREW 141

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G       +R  LD +VFV  +     S  G +  A  +F + P ++ V++ T+I GY
Sbjct: 142 GYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGY 201

Query: 590 GQHGMSERALSLFRSM--KGCGIEPDAITFVAVLSAC 624
            + G    AL LF  M  +   + PD +T +A +S C
Sbjct: 202 VRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGC 238


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/602 (30%), Positives = 324/602 (53%), Gaps = 37/602 (6%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           VFD   R +  ++  ++   V+TER+ +AV     M R   RP   +  +   +L+    
Sbjct: 119 VFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRR--RPCPEAQDDFVLSLALKAC 176

Query: 242 YKSADVVYGL-----LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
            +SA+  YG       +K+G     D FV +S + MYA+    + ARK+F+   +RN   
Sbjct: 177 IRSAEYSYGRSLHCDAIKVGGA---DGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVS 233

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W +MI G VQN    + + LF ++ + D +   + T  + ++A S L  L  G+ +H  +
Sbjct: 234 WTSMISGCVQNGFASDGLLLFNKMRQ-DNVPPSEYTIATVITACSALFGLHQGRWMHGSV 292

Query: 357 IK------NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
           IK      +F++  ++              V + +   D+V W TMI  + QNG   + L
Sbjct: 293 IKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDAL 352

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMY 455
            L  + +      +SVT   +LSA++ LR+  +GK  H   ++ G + +  + + L+DMY
Sbjct: 353 RLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMY 412

Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
           AK   +  A +IF +    ++D   WN+MI+GY +N + ++A + F+QM     +P+ ++
Sbjct: 413 AKCQAVSEADRIFGR--ISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAIS 470

Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           + + L A   +G++ +GK +HG+++++    N++V T+L+++Y+K G +  A  VF ++ 
Sbjct: 471 VVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMN 530

Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQ 635
           ++NSVT+  MI GYG  G S  ++ LF  M   G+ P+ I F ++LS CS++G+V  G +
Sbjct: 531 DRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKR 590

Query: 636 IFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRL 695
            FD M Q + I PS +HY C+ D+L R G + +A EF+  +  + +   +WG+ L  C L
Sbjct: 591 YFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADT-SVWGAFLHGCEL 649

Query: 696 HGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVG 755
           H   + AE   K+++ +      P  +VL+SN+Y   G W+    +R+ M+E+GL K  G
Sbjct: 650 HSRLQFAEEAIKRMMVLHPER--PDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLPG 707

Query: 756 CS 757
           CS
Sbjct: 708 CS 709



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/613 (26%), Positives = 297/613 (48%), Gaps = 55/613 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-DNYTYSSVLKA 116
           AR +FD   RP    +  ++   V      +A+ L+  M++  P     D++  S  LKA
Sbjct: 116 ARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKA 175

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           C  +     G+++HC  I+       FV NSL++MY+       AE              
Sbjct: 176 CIRSAEYSYGRSLHCDAIK-VGGADGFVMNSLVDMYAK------AE-------------- 214

Query: 177 DLVC--KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
           DL C  KVF+ +  RNVV+W +++S  V+     + +  F  M +  + PS  +   V  
Sbjct: 215 DLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVIT 274

Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
           A S+L        ++G ++K G   +++ F++++ + MY + G  D AR +FD     + 
Sbjct: 275 ACSALFGLHQGRWMHGSVIKQG--LMSNSFISAALLDMYVKCGELDHARCVFDELSYIDL 332

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
            +W TMI GY QN +P++A+ LF+       I  + VT  + LSA +QL++L LG+ +H 
Sbjct: 333 VLWTTMIVGYTQNGNPLDALRLFLDK-RFANIAPNSVTTATVLSASAQLRDLSLGKSIHG 391

Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDE 394
             +K  +    +V NA+++                    +DVV+WN+MIS + +N + D+
Sbjct: 392 LAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDD 451

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
            LML  +M  QG   D+++V   LSA+  L +  +GK  H Y ++H  +    +++ L++
Sbjct: 452 ALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLN 511

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           +Y K G + +AR++F++ +  DR+  TW AMI GY   G    +   F +ML+  V PN 
Sbjct: 512 LYNKCGDLLSARRVFDEMN--DRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPND 569

Query: 514 VTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
           +   S+L  C+  G +  GK+     +  + +  ++     ++D+ +++G +  A     
Sbjct: 570 IAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFID 629

Query: 573 KIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIE-PDAITFVAVLSACSYAGLV 630
            +P + ++  +   + G   H   + A    + M     E PD    ++ L   +  G+ 
Sbjct: 630 NMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSN--GMW 687

Query: 631 DEGLQIFDLMQQE 643
           D+ L I   MQ++
Sbjct: 688 DKSLAIRRWMQEK 700


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/707 (28%), Positives = 348/707 (49%), Gaps = 75/707 (10%)

Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV-- 164
           NY YS+ +K C      R  K +H + IR   +P  F++N++++ Y+   SS+ A  V  
Sbjct: 4   NY-YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFD 62

Query: 165 --------GLKYVEVDYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
                       + + YSK   +    + F+ +  R+ V WN ++  Y  +     AV+ 
Sbjct: 63  GIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 122

Query: 214 FRMMLR-MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFM 272
           +  M++      + ++ + +    SS G       ++G ++KLG E  + L V S  + M
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE--SYLLVGSPLLDM 180

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y+++GC   A+K+F    +RNT ++NT+                                
Sbjct: 181 YSKVGCISDAKKVFYGLDDRNTVMYNTL-------------------------------- 208

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
            +  L A   +++                    + L   +E+D VSW+ MI    QNG++
Sbjct: 209 -MGGLLACGMIED-------------------ALQLFRGMEKDSVSWSAMIKGLAQNGME 248

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E +    EM+ +G  +D     ++L A   L   + G+Q HA ++R  +     + S L
Sbjct: 249 KEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSAL 308

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           IDMY K   +  A+ +F++     ++  +W AM+ GY Q G   EA   F  M    + P
Sbjct: 309 IDMYCKCKCLHYAKTVFDRMKQ--KNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDP 366

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T+   + AC  + ++E G Q HG +I   L   + V  SL+ +Y K G I+ +  +F
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLF 426

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
            ++  ++ V++T M+  Y Q G +  A+ LF  M   G++PD +T   V+SACS AGLV+
Sbjct: 427 NEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVE 486

Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
           +G + F+LM  EY I PS  HY C+ D+  R G++ EA  F+  +    + +  W +LL 
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIG-WTTLLS 545

Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
           +CR  G+ E+ +  A+ L+E+D  +  P  + LLS+IYA +G W+ V ++R+ M+E+ +R
Sbjct: 546 ACRNKGNLEIGKWAAESLIELDPHH--PAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVR 603

Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNK 798
           KE G SWI   G ++ F++ D+  P S +IY  LE L  ++ + G K
Sbjct: 604 KEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYK 650



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/556 (23%), Positives = 236/556 (42%), Gaps = 81/556 (14%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           + F+ +     V WN +I G+  + L   A+  Y+ M K    ++    T  ++LK  + 
Sbjct: 90  RTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDFS-SNLTRVTLMTMLKLSSS 148

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD-- 177
             ++ +GK +H   I+        V + LL+MYS      DA+ V     + +   Y+  
Sbjct: 149 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTL 208

Query: 178 ----LVC-------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPST 226
               L C       ++F  M + + V+W+ ++    +     EA+  FR M   G++   
Sbjct: 209 MGGLLACGMIEDALQLFRGMEK-DSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQ 267

Query: 227 ISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
             F +V PA   LG       ++  +++  +   + ++V S+ I MY +  C  +A+ +F
Sbjct: 268 YPFGSVLPACGGLGAINDGRQIHACIIR--TNLQDHIYVGSALIDMYCKCKCLHYAKTVF 325

Query: 287 DNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
           D   ++N   W  M+ GY Q     EA+++F+  ++   I  D  T   A+SA + +  L
Sbjct: 326 DRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLD-MQRSGIDPDHYTLGQAISACANISSL 384

Query: 347 DLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAF 386
           + G Q H   I   +   + V N+++                     RD VSW  M+SA+
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            Q G   E + L  +M + G   D VT+T ++SA S                        
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACS------------------------ 480

Query: 447 MESYLIDMYAKSGLIKTARQIFEK--NDSGD-RDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
                     ++GL++  ++ FE   N+ G       ++ MI  ++++G +EEA      
Sbjct: 481 ----------RAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFING 530

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLI-DMYSKSG 562
           M      P+ +   ++L AC   GN+E+GK      I   LD +   G +L+  +Y+  G
Sbjct: 531 M---PFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIE--LDPHHPAGYTLLSSIYASKG 585

Query: 563 VINYAANVFAKIPEKN 578
             +  A +   + EKN
Sbjct: 586 KWDCVAQLRRGMKEKN 601



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 20/198 (10%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           H A+ +FD + +   V W  +++G+       EA+ ++  M++S      D+YT    + 
Sbjct: 319 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSG--IDPDHYTLGQAIS 376

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           ACA   +L  G   H   I         V NSL+ +Y  C                    
Sbjct: 377 ACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC------------------GD 418

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
            D   ++F+ M  R+ V+W  +VS Y +  R VEA++ F  M+++G++P  ++   V  A
Sbjct: 419 IDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISA 478

Query: 236 LSSLGDYKSADVVYGLLV 253
            S  G  +     + L++
Sbjct: 479 CSRAGLVEKGQRYFELMI 496


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 198/573 (34%), Positives = 316/573 (55%), Gaps = 56/573 (9%)

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC-----FDFARKIFDNCLE 291
           +SL   K A   + L+++ G  ++ D ++A S +  YA +       F+ + ++FD   +
Sbjct: 46  TSLHHLKQA---HALILRTG--HLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRK 100

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            N  +WN MI   ++NN P +AI L+ +++ +     +  T+ + L A S    +  G Q
Sbjct: 101 PNVFLWNCMIKVCIENNEPFKAILLYYEMV-VAHSRPNKYTYPAVLKACSDSGVVAEGVQ 159

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           +HA+++K+ +     +L++ I R   S+  ++ A  +  LDD           +G  +D+
Sbjct: 160 VHAHLVKHGLGGDGHILSSAI-RMYASFGRLVEA--RRILDD-----------KGGEVDA 205

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--------SYLIDMYAKSGLIKT 463
           V   A++         +  ++           FEGM         + +I  +++ G+++ 
Sbjct: 206 VCWNAMIDGYLRFGEVEAAREL----------FEGMPDRSMISTWNAMISGFSRCGMVEV 255

Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
           AR+ F  ++  +RD+ +W+AMI GY Q G   EA   F QM +  + P    + SVL AC
Sbjct: 256 AREFF--DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSAC 313

Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
             +G ++ G+ +H ++ R  +  +  +GTSL+DMY+K G I+ A  VF K+  K   ++ 
Sbjct: 314 ANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWN 373

Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            MI G   HG +E A+ LF  M    I P+ ITFV VL+AC++ GLV +GL IF+ M++E
Sbjct: 374 AMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 430

Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAE 703
           Y ++P  EHY C+ D+LGR G + EA + V  +  E     +WG+LLG+CR HG+ EL E
Sbjct: 431 YGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE-PTPAVWGALLGACRKHGNVELGE 489

Query: 704 VVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVG- 762
            V K LLE++ +NS  G + LLSNIYA+ G WE V +VRK M+ERG++   G S ID+G 
Sbjct: 490 RVGKILLELEPQNS--GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGR 547

Query: 763 GYVNRFASKDQEHPQSHKIYEML----ERLAME 791
           G V++F   D  HPQ   IY+ML    ERL ME
Sbjct: 548 GEVHKFIIGDGSHPQVKDIYQMLDKVKERLQME 580



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 233/512 (45%), Gaps = 67/512 (13%)

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
           Y  ++   +VFD +R+ NV  WN ++   ++     +A+  +  M+    RP+  ++  V
Sbjct: 85  YLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAV 144

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN-CLE 291
             A S  G       V+  LVK G     D  + SSAI MYA  G    AR+I D+   E
Sbjct: 145 LKACSDSGVVAEGVQVHAHLVKHG--LGGDGHILSSAIRMYASFGRLVEARRILDDKGGE 202

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +   WN MI GY++      A ELF  + +   I     T+ + +S  S+   +++ ++
Sbjct: 203 VDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMI----STWNAMISGFSRCGMVEVARE 258

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
                            + + ERD +SW+ MI  ++Q G   E L + ++MQK+      
Sbjct: 259 F---------------FDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRK 303

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEK 470
             + ++LSA +NL   D G+  H Y  R+ I  +G + + L+DMYAK G I  A ++FEK
Sbjct: 304 FVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEK 363

Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
               +++ ++WNAMI G   +G  E+A   F +M   ++ PN +T   VL AC   G ++
Sbjct: 364 --MSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQ 418

Query: 531 LGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
            G  + +     Y ++  +     ++D+  ++G++  A  V + IP              
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIP-------------- 464

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP- 648
                                EP    + A+L AC   G V+ G ++  ++    +++P 
Sbjct: 465 --------------------TEPTPAVWGALLGACRKHGNVELGERVGKIL---LELEPQ 501

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
           ++  Y  ++++  + G+  E  E  K + E G
Sbjct: 502 NSGRYTLLSNIYAKAGRWEEVGEVRKLMKERG 533



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/446 (21%), Positives = 194/446 (43%), Gaps = 67/446 (15%)

Query: 60  QLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAE 119
           ++FD + +P   +WN +I   + NN P++AILLY +M  +  ++  + YTY +VLKAC++
Sbjct: 93  RVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVA--HSRPNKYTYPAVLKACSD 150

Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV--------------- 164
           +  +  G  VH H ++        + +S + MY++    ++A  +               
Sbjct: 151 SGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNA 210

Query: 165 ----GLKYVEVDYSK---------------------------YDLVCKVFDTMRRRNVVA 193
                L++ EV+ ++                            ++  + FD M+ R+ ++
Sbjct: 211 MIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEIS 270

Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
           W+ ++  Y++   ++EA+  F  M +  IRP      +V  A ++LG       ++    
Sbjct: 271 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330

Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
           +   +   D  + +S + MYA+ G  D A ++F+    +    WN MIGG   +    +A
Sbjct: 331 RNSIQL--DGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDA 388

Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
           I+LF ++    +I  +++TF+  L+A +    +  G  +   + K +           +E
Sbjct: 389 IDLFSKM----DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEY----------GVE 434

Query: 374 RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT 433
             +  +  ++    + GL  E   +V  +  +          ALL A     N ++G++ 
Sbjct: 435 PQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEP---TPAVWGALLGACRKHGNVELGERV 491

Query: 434 HAYLLRHGIHFEGMESYLIDMYAKSG 459
              LL       G  + L ++YAK+G
Sbjct: 492 GKILLELEPQNSGRYTLLSNIYAKAG 517



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T  + +S   + G   +AR+ FD +     + W+ +I G++      EA+ ++ QM+K  
Sbjct: 239 TWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEK 298

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
                  +   SVL ACA    L  G+ +H +  R        +  SL++MY+ C     
Sbjct: 299 --IRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKC----- 351

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                         + DL  +VF+ M  + V +WN ++       R  +A+  F    +M
Sbjct: 352 -------------GRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFS---KM 395

Query: 221 GIRPSTISFVNVFPALSSLG 240
            I P+ I+FV V  A +  G
Sbjct: 396 DIYPNEITFVGVLNACAHGG 415


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 281/495 (56%), Gaps = 22/495 (4%)

Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
            +N   +EA     +++ +D  +  DVT L+ L              ++AY    FV L 
Sbjct: 64  ARNGAVMEAKACHGKIIRID--LEGDVTLLNVL--------------INAYSKCGFVELA 107

Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
             V + ++ER +VSWNTMI  + +N ++ E L +  EM+ +GF     T++++LSA    
Sbjct: 108 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVN 167

Query: 425 RNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
            +    K+ H   ++  I     + + L+D+YAK G+IK A Q+FE     D+   TW++
Sbjct: 168 CDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ--DKSSVTWSS 225

Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
           M+AGY QN   EEA + +R+    ++  N  T++SV+ AC+ +  +  GKQ+H    +  
Sbjct: 226 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 285

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
              NVFV +S +DMY+K G +  +  +F+++ EKN   + T+I G+ +H   +  + LF 
Sbjct: 286 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 345

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  G+ P+ +TF ++LS C + GLV+EG + F LM+  Y + P+  HY C+ D+LGR 
Sbjct: 346 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 405

Query: 664 GKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHV 723
           G + EAYE +K +  +     IWGSLL SCR++ + ELAEV A+KL E++  N+  G HV
Sbjct: 406 GLLSEAYELIKSIPFDPTA-SIWGSLLASCRVYKNLELAEVAAEKLFELEPENA--GNHV 462

Query: 724 LLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYE 783
           LLSNIYA    WE + K RK +R+  ++K  G SWID+   V+ F+  +  HP+  +I  
Sbjct: 463 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 522

Query: 784 MLERLAMEMRNAGNK 798
            L+ L ++ R  G K
Sbjct: 523 TLDNLVIKFRKFGYK 537



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 179/358 (50%), Gaps = 27/358 (7%)

Query: 240 GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
           G    A   +G ++++  E   D+ + +  I  Y++ G  + AR++FD  LER+   WNT
Sbjct: 67  GAVMEAKACHGKIIRIDLE--GDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 124

Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
           MIG Y +N    EA+++F++ +  +   F + T  S LSA     +    ++LH   +K 
Sbjct: 125 MIGLYTRNRMESEALDIFLE-MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT 183

Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
            + L + V  A++                    ++  V+W++M++ +VQN   +E L+L 
Sbjct: 184 CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLY 243

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKS 458
              Q+     +  T+++++ A SNL     GKQ HA + + G      + S  +DMYAK 
Sbjct: 244 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 303

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           G ++ +  IF  ++  +++   WN +I+G+ ++   +E  + F +M +  + PN VT +S
Sbjct: 304 GSLRESYIIF--SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 361

Query: 519 VLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
           +L  C   G +E G++        Y L  NV   + ++D+  ++G+++ A  +   IP
Sbjct: 362 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP 419



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 172/347 (49%), Gaps = 33/347 (9%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LARQ+FD +   + V WNT+I  +  N +  EA+ ++ +M+      S   +T SS
Sbjct: 102 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFS--EFTISS 159

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           VL AC    +    K +HC  ++   + + +V  +LL++Y+ C    DA           
Sbjct: 160 VLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDA----------- 208

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   +VF++M+ ++ V W+++V+ YV+ + Y EA+  +R   RM +  +  +  +V
Sbjct: 209 -------VQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 261

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A S+L        ++ ++ K G  + +++FVASSA+ MYA+ G    +  IF    E+
Sbjct: 262 ICACSNLAALIEGKQMHAVICKSG--FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK 319

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           N E+WNT+I G+ ++  P E + LF + ++ D +  ++VTF S LS       ++ G++ 
Sbjct: 320 NLELWNTIISGFAKHARPKEVMILF-EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 378

Query: 353 HAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
              +   +   P          +VV ++ M+    + GL  E   L+
Sbjct: 379 FKLMRTTYGLSP----------NVVHYSCMVDILGRAGLLSEAYELI 415



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 232/513 (45%), Gaps = 68/513 (13%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +L+ CA    +   KA H   IR        + N L+N YS C            +VE  
Sbjct: 59  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC-----------GFVE-- 105

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                L  +VFD M  R++V+WNT++  Y +     EA+  F  M   G + S  +  +V
Sbjct: 106 -----LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 160

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
             A     D      ++ L VK   +   +L+V ++ + +YA+ G    A ++F++  ++
Sbjct: 161 LSACGVNCDALECKKLHCLSVKTCIDL--NLYVGTALLDLYAKCGMIKDAVQVFESMQDK 218

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELF--VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           ++  W++M+ GYVQN +  EA+ L+   Q + L++  F   T  S + A S L  L  G+
Sbjct: 219 SSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQF---TLSSVICACSNLAALIEGK 275

Query: 351 QLHAYIIKN------FVALPV--------------IVLNAVIERDVVSWNTMISAFVQNG 390
           Q+HA I K+      FVA                 I+ + V E+++  WNT+IS F ++ 
Sbjct: 276 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 335

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK------QTHAYLLRHGIHF 444
              E ++L  +MQ+ G   + VT ++LLS   +    + G+      +T   L  + +H+
Sbjct: 336 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 395

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
               S ++D+  ++GL+  A ++  K+   D   + W +++A       LE A VA  ++
Sbjct: 396 ----SCMVDILGRAGLLSEAYELI-KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKL 450

Query: 505 --LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV--FVGTSLIDMYSK 560
             LE     N V ++++  A      I   ++L       L D +V    G S ID+  K
Sbjct: 451 FELEPENAGNHVLLSNIYAANKQWEEIAKSRKL-------LRDCDVKKVRGKSWIDIKDK 503

Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
               +   +   +I E  S T   +++ + + G
Sbjct: 504 VHTFSVGESGHPRIREICS-TLDNLVIKFRKFG 535



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 7/186 (3%)

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
           N   N   +  +L  C   G +   K  HG  IR  L+ +V +   LI+ YSK G +  A
Sbjct: 48  NEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELA 107

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
             VF  + E++ V++ TMI  Y ++ M   AL +F  M+  G +    T  +VLSAC   
Sbjct: 108 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC--- 164

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEI 685
           G+  + L+   L     K       Y   A  D+  + G + +A +  + + ++ +V   
Sbjct: 165 GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV--T 222

Query: 686 WGSLLG 691
           W S++ 
Sbjct: 223 WSSMVA 228


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/627 (29%), Positives = 325/627 (51%), Gaps = 33/627 (5%)

Query: 211 VRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSA 269
           V +F R M   GI  +  S+  +F    +LG      + +  L ++ +   ++ F+ +  
Sbjct: 64  VHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRMAN---SNKFIDNCI 120

Query: 270 IFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFD 329
           + MY +   F  A + FD  ++R+   W T+I  Y +     EA+ LF+++L+L  I+ +
Sbjct: 121 LQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLG-IIPN 179

Query: 330 DVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV--------------------IVLN 369
              F + + + +    LDLG+Q+H+ +I+   A  +                    +  N
Sbjct: 180 FSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATN 239

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
            +  +  V+   ++  + Q   + + L+L  +M  +G  +D    + +L A + L +   
Sbjct: 240 KMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYT 299

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           GKQ H+Y ++ G+  E  + + L+D Y K    + ARQ FE     + +  +W+A+IAGY
Sbjct: 300 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIH--EPNDFSWSALIAGY 357

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
            Q+G  + A   F+ +    V  N     ++  AC+ + ++  G Q+H  +I+  L   +
Sbjct: 358 CQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYL 417

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
              +++I MYSK G ++YA   F  I + ++V +T +I  +  HG +  AL LF+ M+G 
Sbjct: 418 SGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGS 477

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
           G+ P+ +TF+ +L+ACS++GLV EG Q  D M  +Y + P+ +HY C+ D+  R G ++E
Sbjct: 478 GVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLE 537

Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNI 728
           A E ++ +  E +V+  W SLLG C    + E+  + A  +  +D  +S    +V++ N+
Sbjct: 538 ALEVIRSMPFEPDVMS-WKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSAT--YVIMFNL 594

Query: 729 YAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
           YA  G W+   + RK M ER LRKEV CSWI V G V+RF   D+ HPQ+ +IY  L+ L
Sbjct: 595 YALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL 654

Query: 789 AMEMRNAGNKTI--QNSNVDATPRFDE 813
            +  +    + +  +N+  D T R D+
Sbjct: 655 NVSFKKGEERLLNEENALCDFTERKDQ 681



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 260/567 (45%), Gaps = 68/567 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y  + K C     L  GK  H    R  +N ++F+ N +L MY  C S   AE      
Sbjct: 82  SYEYLFKMCGTLGALSDGKLFHNRLQR-MANSNKFIDNCILQMYCDCKSFTAAE------ 134

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       + FD +  R++ +W TI+S Y +  R  EAV  F  ML +GI P+   
Sbjct: 135 ------------RFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSI 182

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           F  +  + +          ++  L+++  E+  D+ + +    MY + G  D A ++  N
Sbjct: 183 FSTLIMSFADPSMLDLGKQIHSQLIRI--EFAADISIETLISNMYVKCGWLDGA-EVATN 239

Query: 289 CLERNTEVWNT-MIGGYVQNNHPVEAIELFVQVL----ELDEIVFDDVTFLSALSAVSQL 343
            + R + V  T ++ GY Q     +A+ LF +++    ELD  VF  +     L A + L
Sbjct: 240 KMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSII-----LKACAAL 294

Query: 344 QELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMI 383
            +L  G+Q+H+Y IK        V  P++                 ++ E +  SW+ +I
Sbjct: 295 GDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALI 354

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-I 442
           + + Q+G  D  L +   ++ +G +++S     +  A S + +   G Q HA  ++ G +
Sbjct: 355 AGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLV 414

Query: 443 HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR 502
            +   ES +I MY+K G +  A Q F   D    D   W A+I  +  +G   EA   F+
Sbjct: 415 AYLSGESAMITMYSKCGKVDYAHQAFLAIDKP--DTVAWTAIICAHAYHGKASEALRLFK 472

Query: 503 QMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKS 561
           +M    V PNVVT   +L AC+  G ++ GKQ L   + +Y ++  +     +ID+YS++
Sbjct: 473 EMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRA 532

Query: 562 GVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE----RALSLFRSMKGCGIEP-DAI 615
           G++  A  V   +P E + +++ +++ G       E     A ++FR      ++P D+ 
Sbjct: 533 GLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFR------LDPLDSA 586

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           T+V + +  + AG  DE  Q   +M +
Sbjct: 587 TYVIMFNLYALAGKWDEAAQFRKMMAE 613



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 225/544 (41%), Gaps = 84/544 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT-YSSVLKA 116
           A + FD I       W TII  +       EA+ L+ +M          N++ +S+++ +
Sbjct: 133 AERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIP---NFSIFSTLIMS 189

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A+   L +GK +H   IR        +   + NMY  C   LD   V            
Sbjct: 190 FADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKC-GWLDGAEVAT---------- 238

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                  + M R++ VA   ++  Y +  R  +A+  F  M+  G+      F  +  A 
Sbjct: 239 -------NKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKAC 291

Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
           ++LGD  +   ++   +KLG E  +++ V +  +  Y +   F+ AR+ F++  E N   
Sbjct: 292 AALGDLYTGKQIHSYCIKLGLE--SEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFS 349

Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
           W+ +I GY Q+     A+E+F + +    ++ +   + +   A S + +L  G Q+HA  
Sbjct: 350 WSALIAGYCQSGKFDRALEVF-KTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADA 408

Query: 357 IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGL 396
           IK  +   +   +A+I                    + D V+W  +I A   +G   E L
Sbjct: 409 IKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEAL 468

Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
            L  EMQ  G   + VT   LL+A S           H+ L++ G  F      L  M  
Sbjct: 469 RLFKEMQGSGVRPNVVTFIGLLNACS-----------HSGLVKEGKQF------LDSMTD 511

Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
           K G+  T                 +N MI  Y++ GLL EA    R M      P+V++ 
Sbjct: 512 KYGVNPTIDH--------------YNCMIDIYSRAGLLLEALEVIRSM---PFEPDVMSW 554

Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
            S+L  C    N+E+G  +   +I  L  LD   +V   + ++Y+ +G  + AA     +
Sbjct: 555 KSLLGGCWSRRNLEIG-MIAADNIFRLDPLDSATYV--IMFNLYALAGKWDEAAQFRKMM 611

Query: 575 PEKN 578
            E+N
Sbjct: 612 AERN 615



 Score = 41.2 bits (95), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G+   A Q F +I +P TV W  II     +    EA+ L+ +M+ S    +    T+  
Sbjct: 431 GKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNV--VTFIG 488

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFS-----NPSRFVYNSLLNMYS 153
           +L AC+ +  ++ GK     F+   +     NP+   YN ++++YS
Sbjct: 489 LLNACSHSGLVKEGK----QFLDSMTDKYGVNPTIDHYNCMIDIYS 530


>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 748

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 205/729 (28%), Positives = 384/729 (52%), Gaps = 61/729 (8%)

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
           D +T+ S+LKAC   + L  G ++H   +    +   ++ +SL+N+Y+            
Sbjct: 45  DTFTFPSLLKACTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYA------------ 92

Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
            K+  + +++     KVFD MR R+VV W  ++  Y +   + EA    + M   GI+PS
Sbjct: 93  -KFGLLGHAR-----KVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPS 146

Query: 226 TISFVNVFPALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
            ++F+ +   +S +   +   +  +VYG        +  D+ V +S + +Y +      A
Sbjct: 147 PVTFLEMLSGISEITQLQCLHAFALVYG--------FECDIAVMNSMLNLYCKCDRVGDA 198

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           +++FD   +R+   WNTMI G+    +  E ++L  ++ + D +  D  TF ++LS    
Sbjct: 199 KELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRD-DGLRPDQQTFGASLSVSGT 257

Query: 343 LQELDLGQQLHAYIIKN--------FVALPVI------------VLNAVIERDVVSWNTM 382
           + +L++G+ LH  I+            AL  +            VL  + ++DVV W  M
Sbjct: 258 MCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVM 317

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           IS  ++ G  ++ L++  EM   G  + S  + +++++ + L + D+G   H Y+LR G 
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGY 377

Query: 443 HFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
             +   + S+ I MYAK G +  +  +FE+ +  +RD  +WNA+I+G+ Q+G L +A + 
Sbjct: 378 TLDTPALNSF-ITMYAKCGHLDKSLILFERMN--ERDLVSWNAIISGHAQHGDLCKALLL 434

Query: 501 FRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
           F +M    V   + +T+ S+L AC+  G + +G+ +H   IR  +     V T+L+DMYS
Sbjct: 435 FEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYS 494

Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
           K G +  A   F  I  K+ V++ T+I GYG HG  + AL ++      G++P+ + F+A
Sbjct: 495 KCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLA 554

Query: 620 VLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEE 679
           VLS+CS+ G+V +GL+IF  M +++ ++P+ EH  CV D+L R  +V +A++F KE    
Sbjct: 555 VLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTR 614

Query: 680 GNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVD 739
            ++ ++ G +L +   +G +E+ +++ + ++E+   ++  G++V L + +A    W++V 
Sbjct: 615 PSI-DVLGIILDASHANGKTEVEDIICRDMIELKPVDA--GHYVRLGHSFAAMKRWDDVS 671

Query: 740 KVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
           +   +MR  GL+K  G S I++ G    F      H  S +   +L+ L+ EM   G+K 
Sbjct: 672 ESWNQMRSLGLKKLPGWSKIEINGKTTTFFMNHTSH--SDETVSLLKLLSREMMQFGSKN 729

Query: 800 IQNSNVDAT 808
           + + + + T
Sbjct: 730 LCDHSNNVT 738



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 186/406 (45%), Gaps = 29/406 (7%)

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +T+ +N+ I     +    + +  F  +L  ++++ D  TF S L A + LQ L  G  +
Sbjct: 10  STKYFNSHINHLSSHGDHKQVLSTFSSMLA-NKLLPDTFTFPSLLKACTSLQLLSFGLSI 68

Query: 353 HAYIIKN--------------------FVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
           H  ++ N                     +     V + + +RDVV W  MI  + + G+ 
Sbjct: 69  HQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIF 128

Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
            E   LV EM+ QG     VT   +LS  S +         HA+ L +G   +  + + +
Sbjct: 129 GEACSLVKEMRFQGIKPSPVTFLEMLSGISEITQLQC---LHAFALVYGFECDIAVMNSM 185

Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
           +++Y K   +  A+++F++ +   RD  +WN MI+G+     + E      +M +  + P
Sbjct: 186 LNLYCKCDRVGDAKELFDQMEQ--RDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRP 243

Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
           +  T  + L     M ++E+G+ LH   +    D ++ + T+LI MY K G    +  V 
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVL 303

Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
             IP+K+ V +T MI G  + G +E+AL +F  M   G +  +    +V+++C+  G  D
Sbjct: 304 ETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFD 363

Query: 632 EGLQIFD-LMQQEYKIQ-PSTEHYCCVADMLGRVGKVVEAYEFVKE 675
            G  +   +++Q Y +  P+   +  +    G + K +  +E + E
Sbjct: 364 LGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNE 409



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 189/441 (42%), Gaps = 49/441 (11%)

Query: 10  LPPPPPT------ATPPPPQLPQIHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLF 62
           + P P T            QL  +H+ +     +     + S L+  C+  R   A++LF
Sbjct: 143 IKPSPVTFLEMLSGISEITQLQCLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELF 202

Query: 63  DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRN 122
           D + +   V WNT+I GF       E + L  +M+        D  T+ + L       +
Sbjct: 203 DQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRP--DQQTFGASLSVSGTMCD 260

Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
           L +G+ +HC  +    +    +  +L+ MY  C              E  Y       +V
Sbjct: 261 LEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEE-----------EASY-------RV 302

Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
            +T+  ++VV W  ++S  ++  R  +A+  F  ML  G   S+ +  +V  + + LG +
Sbjct: 303 LETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSF 362

Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                V+G +++ G  Y  D    +S I MYA+ G  D +  +F+   ER+   WN +I 
Sbjct: 363 DLGASVHGYVLRQG--YTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIIS 420

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G+ Q+    +A+ LF ++        D +T +S L A S    L +G+ +H  +I++F+ 
Sbjct: 421 GHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIR 480

Query: 363 LPVIV--------------------LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
              +V                     N++  +DVVSW T+I+ +  +G  D  L +  E 
Sbjct: 481 PCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEF 540

Query: 403 QKQGFMIDSVTVTALLSAASN 423
              G   + V   A+LS+ S+
Sbjct: 541 LHFGMKPNHVIFLAVLSSCSH 561



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 19/218 (8%)

Query: 37  LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
           L TP + S ++   + G    +  LF+ +     V WN II G   +    +A+LL+ +M
Sbjct: 379 LDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEM 438

Query: 97  KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
           K  +     D+ T  S+L+AC+    L +G+ +HC  IR F  P   V  +L++MYS C 
Sbjct: 439 KFKT-VQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKC- 496

Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
                      Y+E          + F+++  ++VV+W T+++ Y    +   A+  +  
Sbjct: 497 ----------GYLEAAQ-------RCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSE 539

Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
            L  G++P+ + F+ V  + S  G  +    ++  +V+
Sbjct: 540 FLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577


>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/583 (34%), Positives = 311/583 (53%), Gaps = 64/583 (10%)

Query: 260 VNDLFVASS--AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
           +N +F AS   A    ++ G   +A  IFD     N   WNTMI GY + NHP      F
Sbjct: 81  MNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFF 140

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            Q++  +   FD  +F+ AL A  Q  E  +G  +H+ I K      + V N +I+    
Sbjct: 141 RQMIR-NRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVE 199

Query: 374 ----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
                           +DVV+W TMI+ + +N   DE + L   M       + VT+ AL
Sbjct: 200 TGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIAL 259

Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIF---EKND- 472
           LSA S   + ++GK  H ++ R  I     + + ++DMY K G + TAR+IF   E+ D 
Sbjct: 260 LSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDV 319

Query: 473 ------------SGD-------------RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
                       +GD             R+  +WNAMIAGY+QN    EA   F  M++ 
Sbjct: 320 FSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDV 379

Query: 508 -NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVIN 565
             + P   T+  VL A   +G +E+G+++H   +  +  Q ++ +  +++DMY+K G I+
Sbjct: 380 VGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSID 439

Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
            AA +F  +PEKN V++ +MI  Y  +G +++AL+LF  M G G++PD ITF+ VLSACS
Sbjct: 440 AAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACS 499

Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL---GEEGNV 682
           Y G V EG   F+ M+  + ++P  EHY C+ D+L RVG + EAYE +  +     EG  
Sbjct: 500 YGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGG- 558

Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
              WG+LL +CR HG+ E+A++  +KLLE+D  +S  G + LL+NI A+   W++V  VR
Sbjct: 559 ---WGALLDACRKHGNVEMAKLAGEKLLELDPEDS--GIYSLLANICADGKKWKDVRMVR 613

Query: 743 KEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEML 785
           + MRERG++K  G S I++ G  + F   D  H +S +IY ++
Sbjct: 614 RMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSSEIYRVV 656



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 236/542 (43%), Gaps = 98/542 (18%)

Query: 44  SRLSKIC---QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           SRL   C     G  H A  +FD    P    WNT+I G+   N P      + QM ++ 
Sbjct: 88  SRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNR 147

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
                D+ ++   LKAC +     +G AVH    +   +   FV N L+  Y        
Sbjct: 148 --AEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNY-------- 197

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
                     V+        ++FD    ++VV W T+++ Y +     EA+  F  ML  
Sbjct: 198 ----------VETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSS 247

Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVY-------------------GLLVKLGS---- 257
            ++P+ ++ + +  A S  GD +    ++                    + VK G     
Sbjct: 248 DVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTA 307

Query: 258 -EYVN-----DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
            E  N     D+F  +S +  YA+ G    ARK+FD   ERN   WN MI GY QN+ P+
Sbjct: 308 REIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPM 367

Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA-YIIKNFVALPVIVLNA 370
           EA+ELF  ++++  +V  + T +  LSA  QL  L++GQ++H  ++ K  + + +I+ NA
Sbjct: 368 EALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNA 427

Query: 371 VI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
           V+                    E+++VSWN+MISA+   G   + L L  +M   G   D
Sbjct: 428 VMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPD 487

Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME------------SYLIDMYAKS 458
            +T   +LSA S             ++     HFE ME            + ++D+ ++ 
Sbjct: 488 HITFIGVLSACS----------YGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRV 537

Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
           GL+K A ++  +    +  +  W A++    ++G +E A +A  ++LE  + P    I S
Sbjct: 538 GLLKEAYELISRMPM-EASEGGWGALLDACRKHGNVEMAKLAGEKLLE--LDPEDSGIYS 594

Query: 519 VL 520
           +L
Sbjct: 595 LL 596


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 197/601 (32%), Positives = 317/601 (52%), Gaps = 42/601 (6%)

Query: 224 PSTISFVNVFPAL-SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA 282
           P +    N F  L S  G   +A   + L     ++Y N +F  ++ I  YA+      A
Sbjct: 41  PPSTYLSNHFTLLYSKCGSLHNAQTSFDL-----TQYPN-VFSYNTLINAYAKHSLIHLA 94

Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQ 342
           R++FD   + +   +NT+I  Y        A+ LF +V EL     D  T    + A   
Sbjct: 95  RQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVREL-RFGLDGFTLSGVIIACGD 153

Query: 343 LQELDLGQQLHAYIIKNFVALPVIVLNAVIE-----------------------RDVVSW 379
             ++ L +QLH +++         V NAV+                        RD VSW
Sbjct: 154 --DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSW 211

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
           N MI A  Q+    E + L  EM ++G  +D  T+ ++L+A + +++   G Q H  +++
Sbjct: 212 NAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIK 271

Query: 440 HGIHFEG-MESYLIDMYAK-SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ-NGLLEE 496
            G H    + S LID+Y+K +G +   R++FE  +    D   WN MI+G++Q   L E+
Sbjct: 272 SGFHGNSHVGSGLIDLYSKCAGGMVECRKVFE--EIAAPDLVLWNTMISGFSQYEDLSED 329

Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLI 555
               FR+M  +   P+  +   V  AC+ + +  +GKQ+H  +I+  +  N V V  +L+
Sbjct: 330 GIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALV 389

Query: 556 DMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAI 615
            MYSK G ++ A  VF  +PE N V+  +MI GY QHG+   +L LF  M    I P+ I
Sbjct: 390 AMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTI 449

Query: 616 TFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE 675
           TF+AVLSAC + G V+EG + F++M++ ++I+P  EHY C+ D+LGR GK+ EA   ++ 
Sbjct: 450 TFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIET 509

Query: 676 LGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +      +E W +LLG+CR HG+ ELA   A + L+++  N+ P  +V+LSN+YA    W
Sbjct: 510 MPFNPGSIE-WATLLGACRKHGNVELAVKAANEFLQLEPYNAAP--YVMLSNMYASAARW 566

Query: 736 ENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
           E    V++ MRERG++K+ GCSWI++   V+ F ++D  HP   +I+  +  +  +M+ A
Sbjct: 567 EEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQA 626

Query: 796 G 796
           G
Sbjct: 627 G 627



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 261/540 (48%), Gaps = 63/540 (11%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG--L 166
           T+ ++LKAC   R+L  GK +H  + +    PS ++ N    +YS C S  +A+      
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 167 KYVEV--------DYSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
           +Y  V         Y+K+ L+    +VFD + + ++V++NT+++ Y        A+R F 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 216 MM--LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV---NDLF--VASS 268
            +  LR G+   T+S V +     + GD    DV  GL+ +L    V    D +  V ++
Sbjct: 131 EVRELRFGLDGFTLSGVII-----ACGD----DV--GLVRQLHCFVVVCGYDCYASVNNA 179

Query: 269 AIFMYAELGCFDFARKIFDNCLE---RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
            +  Y+  G  + AR++F    E   R+   WN MI    Q+   +EA+ELF +++    
Sbjct: 180 VLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRG- 238

Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVI------------- 366
           +  D  T  S L+A + +++L  G Q H  +IK      + V   +I             
Sbjct: 239 LKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVEC 298

Query: 367 --VLNAVIERDVVSWNTMISAFVQ-NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
             V   +   D+V WNTMIS F Q   L ++G+    EMQ  GF  D  +   + SA SN
Sbjct: 299 RKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSN 358

Query: 424 LRNQDVGKQTHAYLLRHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           L +  VGKQ HA  ++  I +    + + L+ MY+K G +  AR++F+     + +  + 
Sbjct: 359 LSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMP--EHNMVSL 416

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSI 540
           N+MIAGY Q+G+  E+   F  ML+ ++ PN +T  +VL AC   G +E G K  +    
Sbjct: 417 NSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKE 476

Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERAL 599
           R+ ++      + +ID+  ++G +  A  +   +P    S+ + T++    +HG  E A+
Sbjct: 477 RFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAV 536



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 222/490 (45%), Gaps = 57/490 (11%)

Query: 56  HLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLK 115
           HLARQ+FD I +P  V +NT+I  +        A+ L++++++       D +T S V+ 
Sbjct: 92  HLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELR--FGLDGFTLSGVII 149

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
           AC +  ++ + + +HC  + C  +    V N++L  YS      +A              
Sbjct: 150 ACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEAR------------- 194

Query: 176 YDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                +VF  M     R+ V+WN ++    +    +EAV  FR M+R G++    +  +V
Sbjct: 195 -----RVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASV 249

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-GCFDFARKIFDNCLE 291
             A + + D       +G+++K G  +  +  V S  I +Y++  G     RK+F+    
Sbjct: 250 LTAFTCVKDLVGGMQFHGMMIKSG--FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA 307

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +  +WNTMI G+ Q     E      + ++ +    DD +F+   SA S L    +G+Q
Sbjct: 308 PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQ 367

Query: 352 LHAYIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNG 390
           +HA  IK+ +    + +N  +                     E ++VS N+MI+ + Q+G
Sbjct: 368 VHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHG 427

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
           ++ E L L   M ++    +++T  A+LSA  +    + G Q +  +++     E   E 
Sbjct: 428 VEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEG-QKYFNMMKERFRIEPEAEH 486

Query: 450 Y--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA---FRQM 504
           Y  +ID+  ++G +K A +I E     +     W  ++    ++G +E A  A   F Q+
Sbjct: 487 YSCMIDLLGRAGKLKEAERIIETMPF-NPGSIEWATLLGACRKHGNVELAVKAANEFLQL 545

Query: 505 LEHNVTPNVV 514
             +N  P V+
Sbjct: 546 EPYNAAPYVM 555



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 4/123 (3%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T  ++L AC    ++  GK LH    + L+  + ++      +YSK G ++ A   F   
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
              N  +Y T+I  Y +H +   A  +F  +     +PD +++  +++A +  G     L
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADRGECRPAL 126

Query: 635 QIF 637
           ++F
Sbjct: 127 RLF 129


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 221/758 (29%), Positives = 369/758 (48%), Gaps = 59/758 (7%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+       P TV WN++I G+     P     L++ +++S    S D ++ SS++K C
Sbjct: 74  ARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRRSG--LSPDEFSLSSLVKGC 131

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
                  +   V C  +   +    FV + LL+ Y+             K  +VD ++  
Sbjct: 132 GVLEQNEVAHGV-CLKMGLLNG---FVVSGLLDGYA-------------KLGDVDSAE-- 172

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM--LRMGIRPSTISFVNVFPA 235
              K F      + V W  +V  +V    + +    F  M  L +G+  +  S  +V  A
Sbjct: 173 ---KCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGA 229

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           LS   D +  + V+GL VK+G      + + ++ + MY+  G    A K+FD   E +  
Sbjct: 230 LS---DVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVV 286

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W   IG        +EA ELF  VL    +  ++   ++ LSA+ + + L  G+Q+   
Sbjct: 287 SWTERIGAAYD---AIEAFELFRLVLS-GNMEVNEYMLINVLSAMREPKLLKSGRQIQGL 342

Query: 356 IIKNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEG 395
             K    L   V NA+I                      D VSWN++I+ + +NGL  + 
Sbjct: 343 CQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQA 402

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDM 454
           L +  +M+      +  T+ ++L  A+N    +   Q H+Y+++ G I  + M S LI  
Sbjct: 403 LKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITA 462

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
           Y K  +I  +++++  +D    +    NAM A     G   +A   F+     +   + +
Sbjct: 463 YGKCNMICESKRVY--SDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCI 520

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
           T++ VL AC  + ++E G+ +H  +++  + Q+ FV +++ID+Y K G ++ AA  F  +
Sbjct: 521 TLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNV 580

Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGL 634
            + N V +  M++GY QHG       LF  M   GI+PD IT++ VL++C +AGLV+E  
Sbjct: 581 SKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAH 640

Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
                M + + + P  EHY C+ D+ GRVG + +A   + ++    +  +IW  LL  C 
Sbjct: 641 TYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDA-QIWQILLSGCN 699

Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
           +HG+ +L EV AKKL+E+   N     +VLLSN+YA  G W  V K+R+ M+++ + KE 
Sbjct: 700 IHGNVDLGEVAAKKLIELQPENDSA--YVLLSNLYASAGRWNAVGKLRRVMKKKIICKEP 757

Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G SWI V G V+ F + D  HP+S +IY  L+RL  EM
Sbjct: 758 GSSWIQVRGSVHYFFASDTSHPESKEIYMKLQRLYEEM 795



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 195/417 (46%), Gaps = 42/417 (10%)

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
           D  Y L +K G  +  D F++S  +  +A  G F  AR+   +    +T  WN++I GY 
Sbjct: 40  DQSYALFLKSG--FALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYA 97

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQ--ELDLGQQLHAYIIKNFVAL 363
           +   P    +LF   L    +  D+ +  S +     L+  E+  G  L   ++  FV  
Sbjct: 98  RFRQPGPVFDLF-NGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVS 156

Query: 364 PVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
            ++                      D V W  M+  FV NG  ++G  +  EM+  G  +
Sbjct: 157 GLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGL 216

Query: 410 D--SVTVTALLSAASNLRNQDVGKQTHAYLLRHG------IHFEGMESYLIDMYAKSGLI 461
           +    ++T++L A S++R    G+Q     ++ G      IH   + + L++MY++ G  
Sbjct: 217 ELNEFSLTSVLGALSDVRE---GEQVFGLSVKMGLLCGCSIH---LNNALMNMYSRCGSK 270

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
             A ++F+  +  + D  +W   I G   + +  EAF  FR +L  N+  N   + +VL 
Sbjct: 271 SDAIKMFD--EMTEPDVVSWTERI-GAAYDAI--EAFELFRLVLSGNMEVNEYMLINVLS 325

Query: 522 ACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           A      ++ G+Q+ G   +  YLL  +  V  +LI MY K G +  A ++F ++   +S
Sbjct: 326 AMREPKLLKSGRQIQGLCQKAGYLLVAS--VNNALIFMYGKCGEMVAARHIFDEMLCGDS 383

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
           V++ ++I GY ++G+ ++AL +F  M+   ++P+  T  ++L   + +   ++ +QI
Sbjct: 384 VSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQI 440


>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 611

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/557 (34%), Positives = 302/557 (54%), Gaps = 33/557 (5%)

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           +A++ I  Y E G  + AR +FD   ER+   W  MI GY  +N+   A E F ++ +  
Sbjct: 47  LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------NFVALPVIVLNA 370
               ++ T  S L +   ++ L  G  +H  ++K              N  A   + + A
Sbjct: 107 RSP-NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEA 165

Query: 371 --VIERDV-----VSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
             +I RD+     V+W T+I+ F   G    GL +  +M  +   +    +T  + A+++
Sbjct: 166 AFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASAS 225

Query: 424 LRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
           + +   GKQ HA +++ G   +   M S ++D Y + G +  A++ F + +  D+D  TW
Sbjct: 226 IDSVTTGKQIHASVVKRGFQSNLPVMNS-ILDFYCRCGYLSEAKRYFHEME--DKDLITW 282

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
           N +I+   ++    EA + F++       PN  T  S++ AC  +  +  G+QLHG   R
Sbjct: 283 NTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYR 341

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMILGYGQHGMSERALS 600
              ++NV +  +LIDMY+K G I  +  VF +I E+ N V++T+M++GYG HG    A+ 
Sbjct: 342 RGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVE 401

Query: 601 LFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
           LF  M   GI PD I F+AVLSAC +AGLV++GL+ F++M+ EY I P  + Y CV D+L
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461

Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSEL-AEVVAKKLLEMDTRNSMP 719
           GR GK+ EAYE V+ +  + +    WG++LG+C+ H H+ L + + AKK++E+  R  M 
Sbjct: 462 GRAGKIGEAYELVERMPFKPDE-STWGAILGACKAHKHTGLISRLAAKKVMELKPR--MV 518

Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
           G +V+LS IYA EG W    +VRK MR  G +KE G SWI+V   V  FA  D+  P + 
Sbjct: 519 GTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNAS 578

Query: 780 KIYEMLERLAMEMRNAG 796
            +Y +L  L  E + AG
Sbjct: 579 SVYSVLGLLIEETKEAG 595



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/526 (23%), Positives = 226/526 (42%), Gaps = 84/526 (15%)

Query: 18  TPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTII 77
           T  PP  P+ H +      L T  I S   K    G    AR LFD +     V W  +I
Sbjct: 34  TESPPYKPKKHHI------LATNLIVSYFEK----GLVEEARSLFDEMPERDVVAWTAMI 83

Query: 78  IGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF 137
            G+  +N    A   + +M K     S + +T SSVLK+C   + L  G  VH   ++  
Sbjct: 84  TGYASSNYNSCAWECFHEMFKQG--RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG 141

Query: 138 SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
              S +V N+L+NMY+TC  +++A  +                 +F  ++ +N V W T+
Sbjct: 142 MEGSLYVDNALMNMYATCSVTMEAAFL-----------------IFRDIKVKNDVTWTTL 184

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           ++ +      +  ++ ++ ML      +         A +S+    +   ++  +VK G 
Sbjct: 185 ITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRG- 243

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
            + ++L V +S +  Y   G    A++ F    +++   WNT+I   ++ +   EA+ +F
Sbjct: 244 -FQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISE-LERSDSSEALLMF 301

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE---- 373
            Q  E    V +  TF S ++A + +  L+ GQQLH  I +      V + NA+I+    
Sbjct: 302 -QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAK 360

Query: 374 -----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
                            R++VSW +M+  +  +G   E + L  +M   G   D +   A
Sbjct: 361 CGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420

Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMES------------YLIDMYAKSGLIKT 463
           +LSA             HA L+  G+ +F  MES             ++D+  ++G I  
Sbjct: 421 VLSACR-----------HAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGE 469

Query: 464 ARQIFEKNDSGDRDQATWNAMIA---GYTQNGLLEEAFVAFRQMLE 506
           A ++ E+      D++TW A++     +   GL+    +A ++++E
Sbjct: 470 AYELVERMPF-KPDESTWGAILGACKAHKHTGLISR--LAAKKVME 512


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/544 (35%), Positives = 293/544 (53%), Gaps = 58/544 (10%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y+  G    AR IFD  LE+N   +N MI  YV NN  VEA+ +F QV+       D  T
Sbjct: 81  YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYT 139

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------- 373
           F   L A S L  L +G Q+H  I+K  +   + + NA++                    
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199

Query: 374 -RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            RDVVSWN+M++ + Q+G  D+ L +  EM       DS+ +           N D G  
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEM-------DSLNL-----------NHDAGTM 241

Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
                L   + +  +E+           ++    +FE+     ++  +WN MIA Y  N 
Sbjct: 242 AS---LSPVVCYTSLEN-----------VQYIHNMFERMTK--KNLISWNVMIAIYVNNS 285

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           +  EA   F QM E  + P+ VTIAS+LPAC  +  + LG++LH +  +  L  N+ +  
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLEN 345

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  A +VF K+  ++ V++T+M+  YG+ G    A++LF  M   G  P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D+I FV+VLSACS+ GL+D+G   F +M ++Y I P  EH+ C+ D+ GR G+V EAY F
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSF 465

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +K++  E N   +WG+LL +CR+H   ++  V A  L ++  + S  GY+VLLSNIYA+ 
Sbjct: 466 IKQMPMEPNE-RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQS--GYYVLLSNIYAKA 522

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W++V  VR  M++ G++K  G S +++ G V+ F + DQ HPQ+  IY  L+ L  +M
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKM 582

Query: 793 RNAG 796
           +  G
Sbjct: 583 KELG 586



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 240/486 (49%), Gaps = 58/486 (11%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD    +NVV +N ++  YV    YVEA+  F++ML     P   +F  V  A S L +
Sbjct: 93  IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    V+  +VK+G +   +LF+ ++ + MY + GC   ARK+ D    R+   WN+M+
Sbjct: 153 LRVGLQVHDAIVKVGLD--TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFD-DVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
            GY Q+    +A+E+     E+D +  + D   +++LS V     L+  Q +H       
Sbjct: 211 AGYAQSGQFDDALEI---CKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHN------ 261

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                 +   + +++++SWN MI+ +V N + +E + L  +M++ G   D+VT+ +LL A
Sbjct: 262 ------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
             +L    +G++ H Y+ +  +     +E+ L+DMYAK G ++ AR +F+K     RD  
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL--RDVV 373

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +W +M++ Y ++G   +A   F +ML+    P+ +   SVL AC+  G ++ G+  H F 
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR--HYF- 430

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            R + +Q                        +  +P      +  M+  +G+ G  E A 
Sbjct: 431 -RMMTEQ------------------------YGIVPRIEH--FACMVDLFGRAGEVEEAY 463

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS-TEHYCCVAD 658
           S  + M    +EP+   + A+LSAC     +D GL   DL+   +++ P  + +Y  +++
Sbjct: 464 SFIKQMP---MEPNERVWGALLSACRVHSKMDIGLVAADLL---FQLAPKQSGYYVLLSN 517

Query: 659 MLGRVG 664
           +  + G
Sbjct: 518 IYAKAG 523



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 212/496 (42%), Gaps = 70/496 (14%)

Query: 19  PPPPQLPQIHSLSPPIPKLKT-PTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTI 76
           P    L ++HS       L+  PT+  +L +    +G   +AR +FD       V +N +
Sbjct: 49  PGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVM 108

Query: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           I  +V NNL  EA+ ++ Q+  S  +   D+YT+  VLKAC+   NLR+G  VH   ++ 
Sbjct: 109 IRSYVNNNLYVEALSIF-QVMLSCAFNP-DHYTFPCVLKACSGLDNLRVGLQVHDAIVKV 166

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKYVEV-----------DYSKYD---LVC 180
             + + F+ N+L+ MY  C    +A  V   + Y +V              ++D    +C
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226

Query: 181 K----------------------------------VFDTMRRRNVVAWNTIVSWYVKTER 206
           K                                  +F+ M ++N+++WN +++ YV    
Sbjct: 227 KEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSM 286

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
             EAV  F  M   G++P  ++  ++ PA   L        ++  + K       +L + 
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK--GNLRPNLLLE 344

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ + MYA+ GC + AR +FD    R+   W +M+  Y ++    +A+ LF ++L+  + 
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
             D + F+S LSA S    LD G+     + + +  +P I            +  M+  F
Sbjct: 405 P-DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRI----------EHFACMVDLF 453

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            + G  +E    + +M  +    +     ALLSA       D+G      L +      G
Sbjct: 454 GRAGEVEEAYSFIKQMPMEP---NERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSG 510

Query: 447 MESYLIDMYAKSGLIK 462
               L ++YAK+G+ K
Sbjct: 511 YYVLLSNIYAKAGMWK 526



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 170/363 (46%), Gaps = 43/363 (11%)

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           + AY  +   ++   + +  +E++VV +N MI ++V N L  E L +   M    F  D 
Sbjct: 78  MRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDH 137

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIF 468
            T   +L A S L N  VG Q H  +++ G+    F G  + L+ MY K G ++ AR++ 
Sbjct: 138 YTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG--NALVAMYGKCGCLREARKVL 195

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++     RD  +WN+M+AGY Q+G  ++A    ++M   N+  +  T+AS+ P       
Sbjct: 196 DQMPY--RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSP------- 246

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
                              V   TSL +       + Y  N+F ++ +KN +++  MI  
Sbjct: 247 -------------------VVCYTSLEN-------VQYIHNMFERMTKKNLISWNVMIAI 280

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y  + M   A+SLF  M+ CG++PDA+T  ++L AC     +  G ++   +++   ++P
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG-NLRP 339

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           +      + DM  + G + EA +   ++     V   W S++ +    G    A  +  K
Sbjct: 340 NLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV--SWTSMMSAYGRSGQGYDAVALFAK 397

Query: 709 LLE 711
           +L+
Sbjct: 398 MLD 400



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 10/169 (5%)

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +   L+  YS  G  + A  +F +  EKN V +  MI  Y  + +   ALS+F+ M  C 
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKVV 667
             PD  TF  VL ACS    +  GLQ+ D +    K+   T  +    +  M G+ G + 
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAI---VKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
           EA + + ++     V   W S++      G  + A  + K   EMD+ N
Sbjct: 190 EARKVLDQMPYRDVV--SWNSMVAGYAQSGQFDDALEICK---EMDSLN 233


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/546 (32%), Positives = 292/546 (53%), Gaps = 27/546 (4%)

Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
           F+ +S + MY + G    ARK+FD   ERN   WNT+I  Y +N    +   +F  +LEL
Sbjct: 46  FLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLEL 105

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--------------------FVAL 363
            E   +  T++  L ++     L++G+Q+H++ I++                    ++  
Sbjct: 106 -ETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEG 164

Query: 364 PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
             +V   + E++ V+W  ++  + Q     + L L  +M  +G  +D    + +L A + 
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAG 224

Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
           L   + G+Q H ++++ G+  E  + + L+D Y K   +++A + FE     + +  +W+
Sbjct: 225 LEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEW--ISEPNDVSWS 282

Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
           A+I GY Q G  EEA   F  +   +V  N  T  S+  AC+ + +   G Q H  +I+ 
Sbjct: 283 ALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS 342

Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
            L       +++I MYS+ G ++YA  VF  I + ++V +T +I GY   G +  AL LF
Sbjct: 343 SLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLF 402

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
           R M+ CG+ P+A+TF+AVL+ACS++GLV EG Q  + M   Y +  + +HY C+ D+  R
Sbjct: 403 RRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSR 462

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            G + EA E ++ +    + +  W  LLG C  + + E+ E+ A+ L ++D  ++  GY 
Sbjct: 463 AGFLQEALELIRSMPFSPDAMS-WKCLLGGCWTYRNLEIGELAAENLFQLDPEDT-AGY- 519

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
           +L+ N+YA  G W+    VRK M ER LRKE+ CSWI V G V+RF   D+ HPQ+ +IY
Sbjct: 520 ILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIY 579

Query: 783 EMLERL 788
             LE L
Sbjct: 580 SKLEAL 585



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 270/598 (45%), Gaps = 93/598 (15%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +Y  + +AC + ++L  G+  H    R   NP  F+ NS+L MY  C S  DA       
Sbjct: 12  SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADAR------ 65

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       KVFD MR RN+V+WNTI+S Y +   + +    F  ML +  +P+  +
Sbjct: 66  ------------KVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGST 113

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
           ++    +L +    +    ++   ++ G    ++  V ++   MY + G  + A  +F+ 
Sbjct: 114 YIGFLRSLLNPSGLEIGKQIHSHAIRSG--LGSNASVNTAISNMYVKCGWLEGAELVFEK 171

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQV----LELDEIVFDDVTFLSALSAVSQLQ 344
             E+N   W  ++ GY Q    ++A+ LF ++    +ELDE VF  V     L A + L+
Sbjct: 172 MSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIV-----LKACAGLE 226

Query: 345 ELDLGQQLHAYIIK------NFVALPVI--------------VLNAVIERDVVSWNTMIS 384
           EL+ G+Q+H +I+K        V  P++                  + E + VSW+ +I+
Sbjct: 227 ELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALIT 286

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IH 443
            + Q G  +E L     ++ +   I+S T T++  A S L + + G Q HA  ++   + 
Sbjct: 287 GYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVA 346

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
           ++  ES +I MY++ G +  A ++FE  D  D D   W A+IAGY   G   EA   FR+
Sbjct: 347 YQHGESAMITMYSRCGRLDYATRVFESID--DPDAVAWTAIIAGYAYQGNAPEALKLFRR 404

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           M +  V PN VT  +VL AC+  G +  G+Q L   S  Y +   +     ++D+YS++G
Sbjct: 405 MQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 464

Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
            +                               + AL L RSM      PDA+++  +L 
Sbjct: 465 FL-------------------------------QEALELIRSMP---FSPDAMSWKCLLG 490

Query: 623 ACSYAGLVDEGLQIFDLMQQE-YKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGE 678
            C         L+I +L  +  +++ P  T  Y  + ++    GK  EA    K + E
Sbjct: 491 GC----WTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAE 544



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 230/555 (41%), Gaps = 78/555 (14%)

Query: 44  SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           S L   C+ G    AR++FD +     V WNTII  +  N +  +   ++S M +    T
Sbjct: 50  SVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELE--T 107

Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
             +  TY   L++      L IGK +H H IR     +  V  ++ NMY  C     AE+
Sbjct: 108 KPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAEL 167

Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
           V                  F+ M  +N VAW  I+  Y + ER ++A+  F  M+  G+ 
Sbjct: 168 V------------------FEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVE 209

Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
                F  V  A + L +      ++G +VKLG E  +++ V +  +  Y +    + A 
Sbjct: 210 LDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLE--SEVSVGTPLVDFYVKCSNLESAT 267

Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
           K F+   E N   W+ +I GY Q     EA++ F + L    +  +  T+ S   A S L
Sbjct: 268 KAFEWISEPNDVSWSALITGYCQMGEFEEALKTF-ESLRTRSVDINSFTYTSIFQACSAL 326

Query: 344 QELDLGQQLHAYIIKNFVA--------------------LPVIVLNAVIERDVVSWNTMI 383
            + + G Q HA  IK+ +                         V  ++ + D V+W  +I
Sbjct: 327 ADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAII 386

Query: 384 SAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH 443
           + +   G   E L L   MQ  G   ++VT  A+L+A S+                 G+ 
Sbjct: 387 AGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSH----------------SGLV 430

Query: 444 FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
            EG + YL  M +  G+  T                 ++ M+  Y++ G L+EA    R 
Sbjct: 431 IEGRQ-YLESMSSNYGVATTIDH--------------YDCMVDIYSRAGFLQEALELIRS 475

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
           M     +P+ ++   +L  C    N+E+G +L   ++  L  ++      + ++Y+  G 
Sbjct: 476 M---PFSPDAMSWKCLLGGCWTYRNLEIG-ELAAENLFQLDPEDTAGYILMFNLYASFGK 531

Query: 564 INYAANVFAKIPEKN 578
              AANV   + E+N
Sbjct: 532 WKEAANVRKMMAERN 546


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 191/544 (35%), Positives = 293/544 (53%), Gaps = 58/544 (10%)

Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
           Y+  G    AR IFD  LE+N   +N MI  YV NN  VEA+ +F QV+       D  T
Sbjct: 81  YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIF-QVMLSCAFNPDHYT 139

Query: 333 FLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE------------------- 373
           F   L A S L  L +G Q+H  I+K  +   + + NA++                    
Sbjct: 140 FPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMP 199

Query: 374 -RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
            RDVVSWN+M++ + Q+G  D+ L +  EM       DS+ +           N D G  
Sbjct: 200 YRDVVSWNSMVAGYAQSGQFDDALEICKEM-------DSLNL-----------NHDAGTM 241

Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
                L   + +  +E+           ++    +FE+     ++  +WN MIA Y  N 
Sbjct: 242 AS---LSPVVCYTSLEN-----------VQYIHNMFERMTK--KNLISWNVMIAIYVNNS 285

Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
           +  EA   F QM E  + P+ VTIAS+LPAC  +  + LG++LH +  +  L  N+ +  
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLEN 345

Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
           +L+DMY+K G +  A +VF K+  ++ V++T+M+  YG+ G    A++LF  M   G  P
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNP 405

Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
           D+I FV+VLSACS+ GL+D+G   F +M ++Y I P  EH+ C+ D+ GR G+V EAY F
Sbjct: 406 DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSF 465

Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
           +K++  E N   +WG+LL +CR+H   ++  V A  L ++  + S  GY+VLLSNIYA+ 
Sbjct: 466 IKQMPMEPNE-RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQS--GYYVLLSNIYAKA 522

Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
           G W++V  VR  M++ G++K  G S +++ G V+ F + DQ HPQ+  IY  L+ L  +M
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKM 582

Query: 793 RNAG 796
           +  G
Sbjct: 583 KELG 586



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 240/486 (49%), Gaps = 58/486 (11%)

Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
           +FD    +NVV +N ++  YV    YVEA+  F++ML     P   +F  V  A S L +
Sbjct: 93  IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152

Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
            +    V+  +VK+G +   +LF+ ++ + MY + GC   ARK+ D    R+   WN+M+
Sbjct: 153 LRVGLQVHDAIVKVGLD--TNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMV 210

Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFD-DVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
            GY Q+    +A+E+     E+D +  + D   +++LS V     L+  Q +H       
Sbjct: 211 AGYAQSGQFDDALEI---CKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHN------ 261

Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
                 +   + +++++SWN MI+ +V N + +E + L  +M++ G   D+VT+ +LL A
Sbjct: 262 ------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315

Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
             +L    +G++ H Y+ +  +     +E+ L+DMYAK G ++ AR +F+K     RD  
Sbjct: 316 CGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL--RDVV 373

Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
           +W +M++ Y ++G   +A   F +ML+    P+ +   SVL AC+  G ++ G+  H F 
Sbjct: 374 SWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR--HYF- 430

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            R + +Q                        +  +P      +  M+  +G+ G  E A 
Sbjct: 431 -RMMTEQ------------------------YGIVPRIEH--FACMVDLFGRAGEVEEAY 463

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS-TEHYCCVAD 658
           S  + M    +EP+   + A+LSAC     +D GL   DL+   +++ P  + +Y  +++
Sbjct: 464 SFIKQMP---MEPNERVWGALLSACRVHSKMDIGLVAADLL---FQLAPKQSGYYVLLSN 517

Query: 659 MLGRVG 664
           +  + G
Sbjct: 518 IYAKAG 523



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 212/496 (42%), Gaps = 70/496 (14%)

Query: 19  PPPPQLPQIHSLSPPIPKLKT-PTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTI 76
           P    L ++HS       L+  PT+  +L +    +G   +AR +FD       V +N +
Sbjct: 49  PGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVM 108

Query: 77  IIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC 136
           I  +V NNL  EA+ ++ Q+  S  +   D+YT+  VLKAC+   NLR+G  VH   ++ 
Sbjct: 109 IRSYVNNNLYVEALSIF-QVMLSCAFNP-DHYTFPCVLKACSGLDNLRVGLQVHDAIVKV 166

Query: 137 FSNPSRFVYNSLLNMYSTCLSSLDAEMV--GLKYVEV-----------DYSKYD---LVC 180
             + + F+ N+L+ MY  C    +A  V   + Y +V              ++D    +C
Sbjct: 167 GLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEIC 226

Query: 181 K----------------------------------VFDTMRRRNVVAWNTIVSWYVKTER 206
           K                                  +F+ M ++N+++WN +++ YV    
Sbjct: 227 KEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSM 286

Query: 207 YVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVA 266
             EAV  F  M   G++P  ++  ++ PA   L        ++  + K       +L + 
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK--GNLQPNLLLE 344

Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
           ++ + MYA+ GC + AR +FD    R+   W +M+  Y ++    +A+ LF ++L+  + 
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404

Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAF 386
             D + F+S LSA S    LD G+     + + +  +P I            +  M+  F
Sbjct: 405 P-DSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRI----------EHFACMVDLF 453

Query: 387 VQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG 446
            + G  +E    + +M  +    +     ALLSA       D+G      L +      G
Sbjct: 454 GRAGEVEEAYSFIKQMPMEP---NERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSG 510

Query: 447 MESYLIDMYAKSGLIK 462
               L ++YAK+G+ K
Sbjct: 511 YYVLLSNIYAKAGMWK 526



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 170/363 (46%), Gaps = 43/363 (11%)

Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
           + AY  +   ++   + +  +E++VV +N MI ++V N L  E L +   M    F  D 
Sbjct: 78  MRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDH 137

Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIF 468
            T   +L A S L N  VG Q H  +++ G+    F G  + L+ MY K G ++ AR++ 
Sbjct: 138 YTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIG--NALVAMYGKCGCLREARKVL 195

Query: 469 EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGN 528
           ++     RD  +WN+M+AGY Q+G  ++A    ++M   N+  +  T+AS+ P       
Sbjct: 196 DQMPY--RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSP------- 246

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
                              V   TSL +       + Y  N+F ++ +KN +++  MI  
Sbjct: 247 -------------------VVCYTSLEN-------VQYIHNMFERMTKKNLISWNVMIAI 280

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
           Y  + M   A+SLF  M+ CG++PDA+T  ++L AC     +  G ++   +++   +QP
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKG-NLQP 339

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
           +      + DM  + G + EA +   ++     V   W S++ +    G    A  +  K
Sbjct: 340 NLLLENALLDMYAKCGCLEEARDVFDKMRLRDVV--SWTSMMSAYGRSGQGYDAVALFAK 397

Query: 709 LLE 711
           +L+
Sbjct: 398 MLD 400



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 10/169 (5%)

Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG 609
           +   L+  YS  G  + A  +F +  EKN V +  MI  Y  + +   ALS+F+ M  C 
Sbjct: 73  LAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYC--CVADMLGRVGKVV 667
             PD  TF  VL ACS    +  GLQ+ D +    K+   T  +    +  M G+ G + 
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAI---VKVGLDTNLFIGNALVAMYGKCGCLR 189

Query: 668 EAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
           EA + + ++     V   W S++      G  + A  + K   EMD+ N
Sbjct: 190 EARKVLDQMPYRDVV--SWNSMVAGYAQSGQFDDALEICK---EMDSLN 233


>gi|147797310|emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]
          Length = 666

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/544 (34%), Positives = 303/544 (55%), Gaps = 42/544 (7%)

Query: 282 ARKIFDNCLER---NTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFD----DVTF 333
           AR++FD   E    N   W+ +I GY QN+ P +A+ +F ++  E DE+         T 
Sbjct: 123 ARELFDRMREAHLANDVTWSAVIAGYAQNSRPKDALFVFKEMRGECDEMGSPLSPMSHTI 182

Query: 334 LSALSAVSQLQELDLGQQLHAYIIK----------------------NFVALPVIVLNAV 371
            S  SA  QL+++ LG+Q+H Y++K                       F  L   V  ++
Sbjct: 183 TSVFSACGQLRDVILGEQIHGYVMKISSYVENDAFVGSVVVDMYGKCGFEELARFVFYSI 242

Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
           +++ VV W  +I+++V N      + +  EM  +G   + VT+++L+SA S + +  +GK
Sbjct: 243 VDKCVVVWTALIASYVCNECPCPAIEVFREMIYEGMEPNCVTLSSLISACSQIPDLMLGK 302

Query: 432 QTHAYLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT--WNAMIA 486
           + H ++ R          + + LIDMY K   +    +IFEK+ +  R   T  WNA IA
Sbjct: 303 EIHGFITRRRAATTPDVFISTSLIDMYGKCNYMVYGHRIFEKDKTYPRCNTTALWNATIA 362

Query: 487 GYTQNGLLEEAFVAFRQMLE-HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           GY +N  + +A+  FR +     + PN VT++ VLP C     +  GK++H +++R  LD
Sbjct: 363 GYMENNFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQLLSGKEIHCYALRNGLD 422

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKI-PEKNSVTYTTMILGYGQHGMSERALSLFRS 604
           Q +FV   LIDMYSK G +  A N F ++  EKN +++T+MI G+G HG  E A+ +F S
Sbjct: 423 QEIFVSNGLIDMYSKCGKLKLAENQFNRMMNEKNRISWTSMIDGHGIHGDGEGAIRVFES 482

Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
           M    ++PD ITFVA++SACS+AGL+++GL+ F+ M +EY I P  E+Y  V D+L R G
Sbjct: 483 MVREEVKPDHITFVALISACSHAGLLEQGLRYFEEMSREYGIVPVEENYGTVVDLLARAG 542

Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVL 724
           +  EA + ++ +  +     +WG+LLG+CR+HG+ + AE+ A  L +++ ++S  G+  L
Sbjct: 543 RFKEARDLIERMPIKPGA-NVWGALLGACRIHGNVKEAELAAHCLQKLEPKDS--GFQKL 599

Query: 725 LSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY-- 782
           L++IY E G  EN + +R +MRE G+ K  G SW++    +      D+  P + + +  
Sbjct: 600 LASIYLEAGRRENAEDLRSQMREMGMEKRQGFSWLETKEEIYESIDSDKHIPDTTETWSP 659

Query: 783 EMLE 786
           E LE
Sbjct: 660 EQLE 663



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 236/515 (45%), Gaps = 73/515 (14%)

Query: 135 RCFSNPSRFVYNSLLNMYSTCLSSLDAE----------------MVGLKYVEVDYSKYDL 178
           R F +   FV N LL +YS C S   A                 M+   + E   S    
Sbjct: 66  RGFVSSDPFVTNDLLTVYSRCGSPQSARKMFDEIPVPGPFCWNTMISCYFRE---SHCGA 122

Query: 179 VCKVFDTMRRR---NVVAWNTIVSWYVKTERYVEAVRQFRMML----RMG--IRPSTISF 229
             ++FD MR     N V W+ +++ Y +  R  +A+  F+ M      MG  + P + + 
Sbjct: 123 ARELFDRMREAHLANDVTWSAVIAGYAQNSRPKDALFVFKEMRGECDEMGSPLSPMSHTI 182

Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
            +VF A   L D    + ++G ++K+ S   ND FV S  + MY + G  + AR +F + 
Sbjct: 183 TSVFSACGQLRDVILGEQIHGYVMKISSYVENDAFVGSVVVDMYGKCGFEELARFVFYSI 242

Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
           +++   VW  +I  YV N  P  AIE+F +++  + +  + VT  S +SA SQ+ +L LG
Sbjct: 243 VDKCVVVWTALIASYVCNECPCPAIEVFREMI-YEGMEPNCVTLSSLISACSQIPDLMLG 301

Query: 350 QQLHAYIIKN--------FVALPVIVL----------NAVIERD--------VVSWNTMI 383
           +++H +I +         F++  +I +          + + E+D           WN  I
Sbjct: 302 KEIHGFITRRRAATTPDVFISTSLIDMYGKCNYMVYGHRIFEKDKTYPRCNTTALWNATI 361

Query: 384 SAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
           + +++N    +   +   +   +G   ++VT++ +L   +       GK+ H Y LR+G+
Sbjct: 362 AGYMENNFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQLLSGKEIHCYALRNGL 421

Query: 443 HFEGMESY-LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
             E   S  LIDMY+K G +K A   F +    ++++ +W +MI G+  +G  E A   F
Sbjct: 422 DQEIFVSNGLIDMYSKCGKLKLAENQFNRM-MNEKNRISWTSMIDGHGIHGDGEGAIRVF 480

Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT--------S 553
             M+   V P+ +T  +++ AC+  G +E G       +RY  + +   G         +
Sbjct: 481 ESMVREEVKPDHITFVALISACSHAGLLEQG-------LRYFEEMSREYGIVPVEENYGT 533

Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
           ++D+ +++G    A ++  ++P K        +LG
Sbjct: 534 VVDLLARAGRFKEARDLIERMPIKPGANVWGALLG 568



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 150/319 (47%), Gaps = 27/319 (8%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G   LAR +F SI     V+W  +I  +VCN  P  AI ++ +M       +C   T SS
Sbjct: 230 GFEELARFVFYSIVDKCVVVWTALIASYVCNECPCPAIEVFREMIYEGMEPNC--VTLSS 287

Query: 113 VLKACAETRNLRIGKAVHCHFI---RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
           ++ AC++  +L +GK +H  FI   R  + P  F+  SL++MY  C    +  + G +  
Sbjct: 288 LISACSQIPDLMLGKEIH-GFITRRRAATTPDVFISTSLIDMYGKC----NYMVYGHRIF 342

Query: 170 EVDYSKYDLVCKVFDTMRRRNVVA-WNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTI 227
           E D            T  R N  A WN  ++ Y++     +A   FR +    GI P+T+
Sbjct: 343 EKD-----------KTYPRCNTTALWNATIAGYMENNFVSDAWDVFRSITHGEGINPNTV 391

Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
           +   V P  +      S   ++   ++ G +   ++FV++  I MY++ G    A   F+
Sbjct: 392 TMSIVLPLCARSSQLLSGKEIHCYALRNGLD--QEIFVSNGLIDMYSKCGKLKLAENQFN 449

Query: 288 NCL-ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQEL 346
             + E+N   W +MI G+  +     AI +F  ++  +E+  D +TF++ +SA S    L
Sbjct: 450 RMMNEKNRISWTSMIDGHGIHGDGEGAIRVFESMVR-EEVKPDHITFVALISACSHAGLL 508

Query: 347 DLGQQLHAYIIKNFVALPV 365
           + G +    + + +  +PV
Sbjct: 509 EQGLRYFEEMSREYGIVPV 527



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 3/164 (1%)

Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSI 540
           NA++  Y++ G   E    + Q+ +    PN  T +S+L   +   +  L  Q LH  + 
Sbjct: 5   NALLILYSEQGKWRELTAFYHQIRKQGFEPNSFTFSSLLKCLSSSQSPLLHAQPLHADAA 64

Query: 541 -RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
            R  +  + FV   L+ +YS+ G    A  +F +IP      + TMI  Y +      A 
Sbjct: 65  KRGFVSSDPFVTNDLLTVYSRCGSPQSARKMFDEIPVPGPFCWNTMISCYFRESHCGAAR 124

Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
            LF  M+   +  D +T+ AV++  +      + L +F  M+ E
Sbjct: 125 ELFDRMREAHLAND-VTWSAVIAGYAQNSRPKDALFVFKEMRGE 167


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 221/763 (28%), Positives = 365/763 (47%), Gaps = 53/763 (6%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A++LF  + +   V W  I++    N    EA++ Y +M+K      C+    ++V+  C
Sbjct: 98  AQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEG--VMCNANALATVVSLC 155

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
               +   G  V  H +         V NSL+ M+       DAE               
Sbjct: 156 GALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAE--------------- 200

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              ++FD M  R+ ++WN ++S Y   E Y +       M    ++P   +  ++    +
Sbjct: 201 ---RLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA 257

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S         ++ L V  G      L   ++ + MY+  G  D A  +F N   R+   W
Sbjct: 258 SSDLVALGSGIHSLCVSSGLHCSVPLI--NALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           NTMI  YVQ+N  VEA+E   Q+L+ DE   + +TF SAL A S  + L  G+ +HA I+
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMIL 375

Query: 358 KNFVALPVIVLNAVI------------ER--------DVVSWNTMISAFVQNGLDD-EGL 396
           +  +   +++ N+++            ER        DVVS N +   +    L+D    
Sbjct: 376 QRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA--ALEDVANA 433

Query: 397 MLVYE-MQKQGFMIDSVTVTALLSAASNLRN-QDVGKQTHAYLLRHGI-HFEGMESYLID 453
           M V+  M+  G   + +T+  L     +L +    G   HAY+ + G+   E + + LI 
Sbjct: 434 MRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLIT 493

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MYA  G ++++  IF + +  ++   +WNA+IA   ++G  EEA   F          + 
Sbjct: 494 MYATCGDLESSTGIFSRIN--NKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDR 551

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
             +A  L +   + ++E G QLHG S++  LD +  V  + +DMY K G ++        
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD 611

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
              + +  + T+I GY ++G  + A   F+ M   G +PD +TFVA+LSACS+AGL+D+G
Sbjct: 612 PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           +  ++ M   + + P  +H  C+ D+LGR+GK  EA +F+ E+    N L IW SLL S 
Sbjct: 672 MDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDL-IWRSLLSSS 730

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R H + ++    AK LLE+D  +     +VLLSN+YA    W +VDK+R  M+   L K 
Sbjct: 731 RTHKNLDIGRKAAKNLLELDPFDDSA--YVLLSNLYATNARWVDVDKLRSHMKTIKLNKR 788

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             CSW+ +   V+ F   D+ H  + KIY  L+ + +++R  G
Sbjct: 789 PACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVG 831



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 183/426 (42%), Gaps = 44/426 (10%)

Query: 27  IHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
           IHSL          P I + ++     G+   A  LF +++R   + WNT+I  +V +N 
Sbjct: 268 IHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNS 327

Query: 86  PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
             EA+    Q+ ++      ++ T+SS L AC+    L  G+ +H   ++        + 
Sbjct: 328 CVEALETLGQLLQTDEGPP-NSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIG 386

Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
           NSLL MYS C S  D E                  +VF++M   +VV+ N +   Y   E
Sbjct: 387 NSLLTMYSKCNSMEDTE------------------RVFESMPCYDVVSCNVLTGGYAALE 428

Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLF 264
               A+R F  M   GI+P+ I+ +N+     SLGD  S  + ++  + + G   ++D +
Sbjct: 429 DVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTG--LLSDEY 486

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
           + +S I MYA  G  + +  IF     ++   WN +I   V++    EAI+LF+      
Sbjct: 487 ITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAG 546

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE----------- 373
               D       LS+ + L  L+ G QLH   +KN +     V+NA ++           
Sbjct: 547 N-KLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCM 605

Query: 374 ---------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
                    R    WNT+IS + + G   E       M   G   D VT  ALLSA S+ 
Sbjct: 606 LKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHA 665

Query: 425 RNQDVG 430
              D G
Sbjct: 666 GLIDKG 671



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 206/468 (44%), Gaps = 30/468 (6%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M  R   +W T VS   +      A    R+M    +  S  +  ++  A    G  + A
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 246 D---VVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
                ++ L  + G   + ++++ ++ + +Y   G    A+++F    +RN   W  ++ 
Sbjct: 61  ACGAAIHALTHRAG--LMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMV 118

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
               N    EA+  + + +  + ++ +     + +S    L++   G Q+ A+++ + + 
Sbjct: 119 ALSSNGCMEEALVAY-RRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL 177

Query: 363 LPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEM 402
             V V N++I                    ERD +SWN MIS +    +  +  +++ +M
Sbjct: 178 THVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 403 QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLI 461
           +      D  T+ +L+S  ++     +G   H+  +  G+H    + + L++MY+ +G +
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT-PNVVTIASVL 520
             A  +F   +   RD  +WN MI+ Y Q+    EA     Q+L+ +   PN +T +S L
Sbjct: 298 DEAESLFR--NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSAL 355

Query: 521 PACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
            AC+    +  G+ +H   ++  L   + +G SL+ MYSK   +     VF  +P  + V
Sbjct: 356 GACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVV 415

Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
           +   +  GY        A+ +F  M+G GI+P+ IT + +   C   G
Sbjct: 416 SCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 148/324 (45%), Gaps = 9/324 (2%)

Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQD---V 429
            R   SW T +S   + GL+     L+  M+++   +    + +L++A  +   Q+    
Sbjct: 3   HRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAAC 62

Query: 430 GKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G   HA   R G+     + + L+ +Y   GL+  A+++F   +   R+  +W A++   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFW--EMPQRNVVSWTAIMVAL 120

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNV 548
           + NG +EEA VA+R+M +  V  N   +A+V+  C  + +   G Q+    +   L  +V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 549 FVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGC 608
            V  SLI M+     +  A  +F ++ E++ +++  MI  Y    +  +   +   M+  
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 609 GIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVE 668
            ++PD  T  +++S C+ + LV  G  I  L      +  S      + +M    GK+ E
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSS-GLHCSVPLINALVNMYSTAGKLDE 299

Query: 669 AYEFVKELGEEGNVLEIWGSLLGS 692
           A    + +    +V+  W +++ S
Sbjct: 300 AESLFRNMSRR-DVIS-WNTMISS 321


>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
          Length = 528

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 171/426 (40%), Positives = 259/426 (60%), Gaps = 17/426 (3%)

Query: 380 NTMISAFVQNGLDDEGLMLVYEM--QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYL 437
             M S +V+N L    L L   M       ++D        SA++ + ++ V    HA +
Sbjct: 19  TAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALI 78

Query: 438 LRHGIHFE---GMESYLIDMYAKSGL--IKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
            + G  FE   G+ + ++D YAK G   ++ AR++F   D+ +RD  +WN+MIA Y QNG
Sbjct: 79  AKIG--FERNAGVVNTMLDSYAKGGSRDLEVARKVF---DTMERDVVSWNSMIALYAQNG 133

Query: 493 LLEEAFVAFRQMLE--HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
           +  EA   + +ML     +  N V +++VL AC   G I+ GK +H   +R  L++NV+V
Sbjct: 134 MSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYV 193

Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
           GTS++DMYSK G +  A+  F KI EKN ++++ MI GYG HG  + AL +F  MK  G+
Sbjct: 194 GTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGL 253

Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAY 670
            P+ ITF++VL+ACS+AGL+DEG   ++ M+QE+ I+   EHY C+ D+LGR G + EAY
Sbjct: 254 RPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAY 313

Query: 671 EFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
             +KE+  + +   IWG+LL +CR+H + ELAE+  K+L E+D  NS  GY+VLLSNIYA
Sbjct: 314 SLIKEMKVKPDA-AIWGALLSACRIHKNVELAEMSVKRLFELDASNS--GYYVLLSNIYA 370

Query: 731 EEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAM 790
           E G W++V+++R  ++ R + K  G S  ++ G +  F   D+ HPQ  +IY  LE+L  
Sbjct: 371 EAGMWKDVERIRLLVKTRRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLE 430

Query: 791 EMRNAG 796
            M+ AG
Sbjct: 431 RMQEAG 436



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 64/370 (17%)

Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI-VFDDVTFLSALSAV 340
           AR+ FD   + N  +   M  GYV+NN    ++ELF  ++  D   V D+   L A SA 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------------------ERDVVSW 379
           +++ +  +   LHA I K        V+N ++                     ERDVVSW
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTMERDVVSW 122

Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMI--DSVTVTALLSAASNLRNQDVGKQTHAYL 437
           N+MI+ + QNG+  E + L  +M   G  I  ++V ++A+L A ++      GK  H  +
Sbjct: 123 NSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQV 182

Query: 438 LRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           +R G+    + G  + ++DMY+K G ++ A + F K    +++  +W+AMI GY  +G  
Sbjct: 183 VRMGLEENVYVG--TSIVDMYSKCGRVEMASRAFRKIK--EKNILSWSAMITGYGMHGRG 238

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           +EA   F +M    + PN +T  SVL AC+  G ++ G        RY  +         
Sbjct: 239 QEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG--------RYWYNA-------- 282

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
             M  + G+            E     Y  M+   G+ G  + A SL + MK   ++PDA
Sbjct: 283 --MKQEFGI------------EAGVEHYGCMVDLLGRAGCLDEAYSLIKEMK---VKPDA 325

Query: 615 ITFVAVLSAC 624
             + A+LSAC
Sbjct: 326 AIWGALLSAC 335



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 189/412 (45%), Gaps = 35/412 (8%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR+ FD I  P  VI   +  G+V NNL Y ++ L+  M  S   +  D         A 
Sbjct: 3   ARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSAS 62

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A   +  +  ++H    +     +  V N++L+ Y+    S D E+              
Sbjct: 63  ARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKG-GSRDLEVAR------------ 109

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM--GIRPSTISFVNVFPA 235
              KVFDTM  R+VV+WN++++ Y +     EA+  +  ML +  GI+ + ++   V  A
Sbjct: 110 ---KVFDTM-ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLA 165

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            +  G  ++   ++  +V++G E   +++V +S + MY++ G  + A + F    E+N  
Sbjct: 166 CAHAGAIQTGKHIHNQVVRMGLE--ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNIL 223

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W+ MI GY  +    EA+E+F + ++   +  + +TF+S L+A S    LD G+  +  
Sbjct: 224 SWSAMITGYGMHGRGQEALEIFTE-MKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNA 282

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           + + F           IE  V  +  M+    + G  DE   L+ EM+ +    D+    
Sbjct: 283 MKQEF----------GIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKP---DAAIWG 329

Query: 416 ALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQI 467
           ALLSA    +N ++ + +   L        G    L ++YA++G+ K   +I
Sbjct: 330 ALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERI 381



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 33/275 (12%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +AR++FD++ R   V WN++I  +  N +  EAI LYS+M        C+    S+VL A
Sbjct: 107 VARKVFDTMERDV-VSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLA 165

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
           CA    ++ GK +H   +R     + +V  S+++MYS C                   + 
Sbjct: 166 CAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKC------------------GRV 207

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           ++  + F  ++ +N+++W+ +++ Y    R  EA+  F  M R G+RP+ I+F++V  A 
Sbjct: 208 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 267

Query: 237 SSLGDYKSADVVYGLL-----VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-L 290
           S  G        Y  +     ++ G E+   +      + +    GC D A  +     +
Sbjct: 268 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCM------VDLLGRAGCLDEAYSLIKEMKV 321

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELD 324
           + +  +W  ++    + +  VE  E+ V+ L ELD
Sbjct: 322 KPDAAIWGALLSA-CRIHKNVELAEMSVKRLFELD 355


>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/569 (32%), Positives = 311/569 (54%), Gaps = 61/569 (10%)

Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
           +G   +A +IF+        ++N +I  + +N    +A+ LF Q+ E + +  D+ T+  
Sbjct: 79  IGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLRE-EGLSPDNFTYPF 137

Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
              A+  L E+  G++++ +++K+ +     V N+++                    +RD
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRD 197

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTH 434
           VVSWN +IS +V+    ++ + +   MQ+Q  +  +  TV + LSA   L+  ++GK+ H
Sbjct: 198 VVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH 257

Query: 435 AYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKND--------------------- 472
            Y+ R  + F   + + L+DMY K G +  AR+IF  ND                     
Sbjct: 258 RYV-REQLGFTIKIGNALVDMYCKCGHLSIAREIF--NDMPIKTVICWTSMVSGYVNCGQ 314

Query: 473 ----------SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
                     S  RD   W AMI GY Q    ++A   FR+M    V+P+  T+ ++L  
Sbjct: 315 LDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTG 374

Query: 523 CNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTY 582
           C  +G +E GK +HG+     +  +  VGT+LI+MY+K G I  +  +F  + EK++ ++
Sbjct: 375 CAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASW 434

Query: 583 TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQ 642
           T++I G   +G + +AL LF  M   G++PD ITF+ VLSACS+ GLV+EG + F  M  
Sbjct: 435 TSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTA 494

Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN--VLEIWGSLLGSCRLHGHSE 700
            Y+I+P  EHY C+ D+LGR G++ EA E +++     N  ++ ++G+LL +CR HG+ E
Sbjct: 495 VYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVE 554

Query: 701 LAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWID 760
           + E VAK+L+ +++ +S    H LL+NIYA    WE+V KVR++M++ G++K  GCS ++
Sbjct: 555 MGERVAKRLVGIESGDS--SVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVE 612

Query: 761 VGGYVNRFASKDQEHPQSHKIYEMLERLA 789
           V G V+ F   D  HP+  +IY ML+ +A
Sbjct: 613 VNGIVHEFLVGDASHPEMREIYSMLDSIA 641



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 248/545 (45%), Gaps = 84/545 (15%)

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           +LK C   ++L   K +    +R   + S       LN +  C +  D  +  L Y E  
Sbjct: 38  LLKNCKSMQHL---KQIQTQILRTGFHQS----GDTLNKFMVCCT--DPSIGNLHYAE-- 86

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
                   ++F+ +    +  +N ++  + K   + +AV  FR +   G+ P   ++  V
Sbjct: 87  --------RIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFV 138

Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
           F A+  LG+ +  + VYG +VK G E+  D +V +S + MYAE+G     R++F+   +R
Sbjct: 139 FKAIGCLGEVREGEKVYGFVVKSGLEF--DTYVCNSLMDMYAEVGRVQNLRQVFEEMPQR 196

Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
           +   WN +I GYV+     +A+++F ++ +   +  ++ T +S LSA   L+ L+LG+++
Sbjct: 197 DVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEI 256

Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------------------------- 373
           H Y ++  +   + + NA+++                                       
Sbjct: 257 HRY-VREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQL 315

Query: 374 ------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
                       RDVV W  MI+ +VQ    D+ + L  EMQ +    D  T+ ALL+  
Sbjct: 316 DEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGC 375

Query: 422 SNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
           + L   + GK  H Y+  + I  +  + + LI+MYAK G I+ + +IF  N   ++D A+
Sbjct: 376 AQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIF--NGLKEKDTAS 433

Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFS 539
           W ++I G   NG   +A   F +M++  V P+ +T   VL AC+  G +E G K     +
Sbjct: 434 WTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMT 493

Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT----YTTMILGYGQHG-- 593
             Y ++  +     LID+  ++G ++ A  +  K P  N+      Y  ++     HG  
Sbjct: 494 AVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNV 553

Query: 594 -MSER 597
            M ER
Sbjct: 554 EMGER 558



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 215/481 (44%), Gaps = 94/481 (19%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           G  H A ++F+ I  P   I+N +I  F  N    +A+LL+ Q+++     S DN+TY  
Sbjct: 80  GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEG--LSPDNFTYPF 137

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
           V KA      +R G+ V+   ++       +V NSL++MY+                  +
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYA------------------E 179

Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVN 231
             +   + +VF+ M +R+VV+WN ++S YVK  RY +AV  FR M +   +RP+  + V+
Sbjct: 180 VGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVS 239

Query: 232 VFPALSSLGDYKSADVVY-------GLLVKLGS----------------EYVNDLFVA-- 266
              A  +L   +    ++       G  +K+G+                E  ND+ +   
Sbjct: 240 TLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTV 299

Query: 267 ---SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
              +S +  Y   G  D AR++F+    R+  +W  MI GYVQ N   +A+ LF + +++
Sbjct: 300 ICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFRE-MQI 358

Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
             +  D  T ++ L+  +QL  L+ G+ +H YI +N + +  +V  A+I           
Sbjct: 359 KRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEK 418

Query: 373 ---------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
                    E+D  SW ++I     NG   + L L  EM + G   D +T   +LSA S 
Sbjct: 419 SLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACS- 477

Query: 424 LRNQDVGKQTHAYLLRHG-IHFEGM----------ESY--LIDMYAKSGLIKTARQIFEK 470
                     H  L+  G  HF  M          E Y  LID+  ++G +  A ++ EK
Sbjct: 478 ----------HGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEK 527

Query: 471 N 471
           +
Sbjct: 528 S 528



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 196/419 (46%), Gaps = 28/419 (6%)

Query: 53  GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
           GR    RQ+F+ + +   V WN +I G+V      +A+ ++ +M++ S     +  T  S
Sbjct: 181 GRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRP-NEATVVS 239

Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS-SLDAEMVG---LKY 168
            L AC   + L +GK +H  ++R     +  + N+L++MY  C   S+  E+     +K 
Sbjct: 240 TLSACIALKMLELGKEIH-RYVREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKT 298

Query: 169 V---------EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
           V          V+  + D   ++F+    R+VV W  +++ YV+  R+ +AV  FR M  
Sbjct: 299 VICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQI 358

Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
             + P   + V +    + LG  +    ++G + +  ++ + D  V ++ I MYA+ G  
Sbjct: 359 KRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDE--NKIMIDAVVGTALIEMYAKCGFI 416

Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
           + + +IF+   E++T  W ++I G   N    +A+ELF ++++   +  DD+TF+  LSA
Sbjct: 417 EKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTG-VKPDDITFIGVLSA 475

Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
            S    ++ G+       K+F ++  +     IE  +  +  +I    + G  DE   L+
Sbjct: 476 CSHGGLVEEGR-------KHFRSMTAVYQ---IEPKLEHYGCLIDLLGRAGQLDEAEELI 525

Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKS 458
            +       +      ALLSA     N ++G++    L+        + + L ++YA +
Sbjct: 526 EKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 584



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 431 KQTHAYLLRHGIHFEG--MESYLIDMYAKS-GLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           KQ    +LR G H  G  +  +++     S G +  A +IF   D        +N +I  
Sbjct: 49  KQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDI--PGLFIYNLVIKA 106

Query: 488 YTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQN 547
           +T+NG   +A + FRQ+ E  ++P+  T   V  A   +G +  G++++GF ++  L+ +
Sbjct: 107 FTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFD 166

Query: 548 VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-K 606
            +V  SL+DMY++ G +     VF ++P+++ V++  +I GY +    E A+ +FR M +
Sbjct: 167 TYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQ 226

Query: 607 GCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
              + P+  T V+ LSAC    +++ G +I   ++++
Sbjct: 227 QSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQ 263


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 194/571 (33%), Positives = 302/571 (52%), Gaps = 65/571 (11%)

Query: 252 LVKLGSEYVNDLF------VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
           L KL  + +ND +      V    + +YA  G    AR IFD   ++N   +N MI  YV
Sbjct: 37  LKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYV 96

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
            NNH  +   L  + +     V D  T+   L A S+   L +G Q+H  ++K  + L +
Sbjct: 97  -NNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNL 155

Query: 366 IVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
            V N +I                     RDVVSWN+M+S + QNG  ++ L L  EM+  
Sbjct: 156 YVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEAL 215

Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTAR 465
               +  T+ +LL A +N  + +V                        +Y K   +K  +
Sbjct: 216 NLKPNDCTMASLLPAVTNTTSDNV------------------------LYVKEMFLKLTK 251

Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
                     +   +WN MIA Y  N + +EA V + QM  + V P+VV+I SVLPA   
Sbjct: 252 ----------KSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGD 301

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  + LG+++H F+ R  L  N+ +  +LIDMY+K G +  A  VF ++  ++ V++T++
Sbjct: 302 LSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSI 361

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I  YG+ G    A+++F  M+  G+ PD+I FV+VL+ACS+AGL+D+G   F+LM  E  
Sbjct: 362 ISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM-AECG 420

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I P  EH+ CV D+LGR GK+ EAY F++++  E +   +WG LL +CR++ +  +  + 
Sbjct: 421 ITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDE-RVWGPLLSACRVYSNMNIGILA 479

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A KLL ++  +S  GY+VLLSNIYA+ G W +V  +R  M  +G++K  G S +++   V
Sbjct: 480 ADKLLMLNPEHS--GYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGV 537

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           + F + D  HPQS KIYE L+ L  +M+  G
Sbjct: 538 HTFLAGDHSHPQSKKIYEELDVLVGKMKELG 568



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 220/478 (46%), Gaps = 93/478 (19%)

Query: 39  TPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK 97
            P++  +L ++    G P LAR +FD IT    V +N +I  +V N+L  +A+L+Y  M 
Sbjct: 53  NPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTM- 111

Query: 98  KSSPYTSC---DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
               YT     D YTY  VLKA + + +L +G  +H   ++   + + +V N L+ MY  
Sbjct: 112 ----YTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGK 167

Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
           C S  +A+                  +V D +  R+VV+WN++VS Y +  R+ +A+   
Sbjct: 168 CKSLKEAQ------------------QVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELC 209

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R M  + ++P+  +  ++ PA++   +  S +V+Y                         
Sbjct: 210 REMEALNLKPNDCTMASLLPAVT---NTTSDNVLY------------------------- 241

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
                   +++F    +++   WN MI  YV N+ P EA+ L+ Q +E + +  D V+ +
Sbjct: 242 -------VKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQ-MEANGVEPDVVSIV 293

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------R 374
           S L A   L  L LG+++H +  +  +   +++ NA+I+                    R
Sbjct: 294 SVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR 353

Query: 375 DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTH 434
           DVVSW ++ISA+ + G   + + +  EM+  G   DS+   ++L+A S+    D G+   
Sbjct: 354 DVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYF 413

Query: 435 AYLLRHGI-----HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
             +   GI     HF    + ++D+  ++G I  A   F +    + D+  W  +++ 
Sbjct: 414 NLMAECGITPKLEHF----ACVVDLLGRAGKIDEAYG-FIRQMPLEPDERVWGPLLSA 466


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/627 (29%), Positives = 335/627 (53%), Gaps = 71/627 (11%)

Query: 193 AWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN--VFPALSSLGDYKSADVVYG 250
           A+  +V   V+T    +A R    M     +P T SF++  +    +  G  + A  ++ 
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQP-TDSFLHNQLLHLYAKFGKLRDAQNLFD 82

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
            ++K       D F  ++ +  YA+ G     +  FD    R++  +NT I G+  N+ P
Sbjct: 83  KMLK------RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCP 136

Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLN 369
            E++ELF + ++ +     + T +S L+A +QL +L  G+Q+H  II +NF+   V + N
Sbjct: 137 QESLELF-KRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLG-NVFIWN 194

Query: 370 AVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
           A+ +                    +++VSWN MIS + +NG  ++ + L+++M+  G M 
Sbjct: 195 ALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMP 254

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE 469
           D VT++ +++A                                  Y + G +  AR++F 
Sbjct: 255 DQVTMSTIIAA----------------------------------YCQCGRVDEARRVF- 279

Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
            ++  ++D   W AM+ GY +NG  E+A + F +ML  ++ P+  T++SV+ +C  + ++
Sbjct: 280 -SEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
             G+ +HG SI   L+ N+ V ++LIDMYSK G I+ A +VF  +P +N V++  MI+G 
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGC 398

Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
            Q+G  + AL LF +M     +PD +TF+ +LSAC +   +++G + FD +  ++ + P+
Sbjct: 399 AQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPT 458

Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
            +HY C+ ++LGR G++ +A   +K +  + + L IW +LL  C   G    AEV A+ L
Sbjct: 459 LDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFL-IWSTLLSICSTKGDIVNAEVAARHL 517

Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
            E+D   ++P  +++LSN+YA  G W++V  VR  M+ + ++K  G SWI++   V+RF 
Sbjct: 518 FELDPTIAVP--YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFT 575

Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
           S+D+ HP+S  IYE L  L  +++  G
Sbjct: 576 SEDRTHPESEDIYEKLNMLIGKLQEEG 602



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 245/535 (45%), Gaps = 68/535 (12%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPS-RFVYNSLLNMYSTCLSSLDAEMVGLK 167
            Y+ ++  C  T  +   K +  H       P+  F++N LL++Y+      DA+ +  K
Sbjct: 24  AYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDK 83

Query: 168 YVEVDYSKYDLVCK-------------VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
            ++ D   ++ +                FD M  R+ V++NT ++ +       E++  F
Sbjct: 84  MLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELF 143

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           + M R G  P+  + V++  A + L D +    ++G ++     ++ ++F+ ++   MYA
Sbjct: 144 KRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIV--RNFLGNVFIWNALTDMYA 201

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G  + AR +FD   ++N   WN MI GY +N  P + I L  Q + L   + D VT  
Sbjct: 202 KCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQ-MRLSGHMPDQVTMS 260

Query: 335 SALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDE 394
           + ++A  Q   +D  ++               V +   E+D+V W  M+  + +NG +++
Sbjct: 261 TIIAAYCQCGRVDEARR---------------VFSEFKEKDIVCWTAMMVGYAKNGREED 305

Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYLID 453
            L+L  EM  +    DS T+++++S+ + L +   G+  H   +  G++   +  S LID
Sbjct: 306 ALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALID 365

Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
           MY+K G I  AR +F  N    R+  +WNAMI G  QNG  ++A   F  ML+    P+ 
Sbjct: 366 MYSKCGFIDDARSVF--NLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDN 423

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           VT   +L AC     IE G++                  S+ + +  +  +++       
Sbjct: 424 VTFIGILSACLHCNWIEQGQEYF---------------DSISNQHGMTPTLDH------- 461

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
                   Y  M+   G+ G  E+A++L ++M     +PD + +  +LS CS  G
Sbjct: 462 --------YACMVNLLGRTGRIEQAVALIKNMAH---DPDFLIWSTLLSICSTKG 505



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 153/354 (43%), Gaps = 53/354 (14%)

Query: 46  LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
           LS   + G     +  FD +    +V +NT I GF  N+ P E++ L+ +M++     + 
Sbjct: 96  LSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT- 154

Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------- 155
             YT  S+L A A+  +LR GK +H   I      + F++N+L +MY+ C          
Sbjct: 155 -EYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF 213

Query: 156 -----------------------------------LSSLDAEMVGLKYVEVDY---SKYD 177
                                              LS    + V +  +   Y    + D
Sbjct: 214 DCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVD 273

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
              +VF   + +++V W  ++  Y K  R  +A+  F  ML   I P + +  +V  + +
Sbjct: 274 EARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCA 333

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
            L        V+G  +  G    N+L V+S+ I MY++ G  D AR +F+    RN   W
Sbjct: 334 KLASLHHGQAVHGKSILAGLN--NNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSW 391

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
           N MI G  QN H  +A+ELF  +L+  +   D+VTF+  LSA      ++ GQ+
Sbjct: 392 NAMIVGCAQNGHDKDALELFENMLQ-QKFKPDNVTFIGILSACLHCNWIEQGQE 444



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 20/195 (10%)

Query: 41  TIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS 100
           T+ + ++  CQ GR   AR++F        V W  +++G+  N    +A+LL+++M    
Sbjct: 258 TMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLE- 316

Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLD 160
            +   D+YT SSV+ +CA+  +L  G+AVH   I    N +  V ++L++MYS C    D
Sbjct: 317 -HIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDD 375

Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
           A                    VF+ M  RNVV+WN ++    +     +A+  F  ML+ 
Sbjct: 376 AR------------------SVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 221 GIRPSTISFVNVFPA 235
             +P  ++F+ +  A
Sbjct: 418 KFKPDNVTFIGILSA 432


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 175/529 (33%), Positives = 287/529 (54%), Gaps = 30/529 (5%)

Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
           +RN   W  MI G  QN+   EAI  F  +    E+      F SA+ A + L  +++G+
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVP-TQFAFSSAIRACASLGSIEMGK 61

Query: 351 QLHAYIIKNFVALPVIV----------LNAVIE----------RDVVSWNTMISAFVQNG 390
           Q+H   +K  +   + V            A+ +          +D VSW  MI  + + G
Sbjct: 62  QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 121

Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGM 447
             +E L+   +M  +   ID   + + L A   L+    G+  H+ +++ G     F G 
Sbjct: 122 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG- 180

Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
            + L DMY+K+G +++A  +F   DS  R+  ++  +I GY +   +E+    F ++   
Sbjct: 181 -NALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
            + PN  T +S++ AC     +E G QLH   ++   D++ FV + L+DMY K G++  A
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 298

Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
              F +I +   + + +++  +GQHG+ + A+ +F  M   G++P+AITF+++L+ CS+A
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 358

Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
           GLV+EGL  F  M + Y + P  EHY CV D+LGR G++ EA EF+  +  E N    W 
Sbjct: 359 GLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG-WC 417

Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
           S LG+CR+HG  E+ ++ A+KL++++ +NS  G  VLLSNIYA E  WE+V  VR  MR+
Sbjct: 418 SFLGACRIHGDKEMGKLAAEKLVKLEPKNS--GALVLLSNIYANERQWEDVRSVRMRMRD 475

Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
             ++K  G SW+DVG   + F ++D  HP+   IYE L+ L  +++ AG
Sbjct: 476 GNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 524



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 217/442 (49%), Gaps = 43/442 (9%)

Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
           M +RN+V+W  ++S   +  ++ EA+R F  M   G  P+  +F +   A +SLG  +  
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
             ++ L +K G    ++LFV S+   MY++ G    A K+F+    ++   W  MI GY 
Sbjct: 61  KQMHCLALKFG--IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 118

Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
           +     EA+  F ++++ +E+  D     S L A   L+    G+ +H+ ++K      +
Sbjct: 119 KIGEFEEALLAFKKMID-EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 177

Query: 366 IVLNAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
            V NA+ +                     R+VVS+  +I  +V+    ++GL +  E+++
Sbjct: 178 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 237

Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG---MESYLIDMYAKSGLI 461
           QG   +  T ++L+ A +N    + G Q HA +++  I+F+    + S L+DMY K GL+
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMK--INFDEDPFVSSILVDMYGKCGLL 295

Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
           + A Q F  ++ GD  +  WN++++ + Q+GL ++A   F +M++  V PN +T  S+L 
Sbjct: 296 EQAIQAF--DEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLT 353

Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVG------TSLIDMYSKSGVINYAANVFAKIP 575
            C+  G +E      G    Y +D+   V       + +ID+  ++G +  A     ++P
Sbjct: 354 GCSHAGLVE-----EGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP 408

Query: 576 -EKNSVTYTTMILGYGQHGMSE 596
            E N+  + + +     HG  E
Sbjct: 409 FEPNAFGWCSFLGACRIHGDKE 430



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 196/443 (44%), Gaps = 73/443 (16%)

Query: 71  VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVH 130
           V W  +I G   N+   EAI  +  M+      +   + +SS ++ACA   ++ +GK +H
Sbjct: 7   VSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPT--QFAFSSAIRACASLGSIEMGKQMH 64

Query: 131 CHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRN 190
           C  ++       FV ++L +MYS C +  DA                  CKVF+ M  ++
Sbjct: 65  CLALKFGIGSELFVGSNLEDMYSKCGAMFDA------------------CKVFEEMPCKD 106

Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
            V+W  ++  Y K   + EA+  F+ M+   +        +   A  +L   K    V+ 
Sbjct: 107 EVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHS 166

Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTEVWNTMIGGYVQNNH 309
            +VKLG E  +D+FV ++   MY++ G  + A  +F    E RN   +  +I GYV+   
Sbjct: 167 SVVKLGFE--SDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQ 224

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI-- 366
             + + +FV+ L    I  ++ TF S + A +    L+ G QLHA ++K NF   P +  
Sbjct: 225 IEKGLSVFVE-LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSS 283

Query: 367 -----------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                              + + +   ++WN+++S F Q+GL  + + +   M  +G   
Sbjct: 284 ILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKP 343

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-----------EGMESY--LIDMYA 456
           +++T  +LL+  S           HA L+  G+ +            G E Y  +ID+  
Sbjct: 344 NAITFISLLTGCS-----------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLG 392

Query: 457 KSGLIKTARQI-----FEKNDSG 474
           ++G +K A++      FE N  G
Sbjct: 393 RAGRLKEAKEFINRMPFEPNAFG 415



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           +P++N V++T MI G  Q+     A+  F  M+ CG  P    F + + AC+  G ++ G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
            Q+  L  + + I         + DM  + G + +A +  +E+  +  V   W +++   
Sbjct: 61  KQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV--SWTAMIDGY 117

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYA 730
              G  E A +  KK+++ +        HVL S + A
Sbjct: 118 SKIGEFEEALLAFKKMIDEEVTIDQ---HVLCSTLGA 151


>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 939

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 205/686 (29%), Positives = 346/686 (50%), Gaps = 107/686 (15%)

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
           S L +CA + ++  G+ +H   ++   + + F+ NS+LNMY+ C   +DAE V   + ++
Sbjct: 300 SALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAHAKL 359

Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
           D + ++++              K+FD M  R+ V++ T++  Y +  ++ EA+  FR M 
Sbjct: 360 DSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 419

Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
            +GI  + ++   V  A S LG      +++ L +KL  +  + +F +++ + MY    C
Sbjct: 420 NLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLD--DRVFASTNLLLMYCICSC 477

Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
              ARK+FD   ERN   WN M+ GY +     +A ELF Q+ E D              
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKD-------------- 523

Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
                                                +VSW TMI   ++    DE L+ 
Sbjct: 524 -------------------------------------IVSWGTMIDGCLRKNQLDEALVY 546

Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-----------IHFEGM 447
             EM ++G     V +  LLSA++       G Q H  +++ G           IHF  +
Sbjct: 547 YTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCYDFLQATIIHFYAV 606

Query: 448 ---------------------ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
                                 + LI  + K+G+++ AR++F++  + D+D  +WNAM++
Sbjct: 607 SNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQ--TRDKDIFSWNAMMS 664

Query: 487 GYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
           GY Q+   + A   FR+M+  + V P+ +T+ SV  A + +G++E GK+ H +  R  + 
Sbjct: 665 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIP 724

Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT---YTTMILGYGQHGMSERALSLF 602
            N  +  ++I+MY+K G I  A N+F +     S T   +  +I G   HG ++ AL L+
Sbjct: 725 PNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLY 784

Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
             ++   I+P++ITFV VLSAC +AGLV+ G   F+ M+ ++ I+P  +HY C+ D+LG+
Sbjct: 785 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 844

Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
            GK+ EA E +K +  + +V+ IWG LL + R+HG+ E+AE+ A +L  +D   S  G  
Sbjct: 845 SGKLEEAKEMIKNMPVKADVM-IWGMLLSASRIHGNVEIAELAAAELAAIDP--SHGGCK 901

Query: 723 VLLSNIYAEEGNWENVDKVRKEMRER 748
           V+LSN+YA+ G WE+V  VR+ MR R
Sbjct: 902 VMLSNVYADAGRWEDVALVREVMRTR 927



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 227/506 (44%), Gaps = 78/506 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A +LFD +   + V + T+I G+  NN   EA+ L+ +M+        +  T ++V+ AC
Sbjct: 380 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG--IMLNEVTLATVISAC 437

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE----------MVGLK 167
           +    +   K +H   I+   +   F   +LL MY  C    DA           +V   
Sbjct: 438 SHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICSCLKDARKLFDEMPERNLVTWN 497

Query: 168 YVEVDYSKYDLV---CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
            +   YSK  L+    ++FD +  +++V+W T++   ++  +  EA+  +  MLR G++P
Sbjct: 498 VMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRRGMKP 557

Query: 225 STISFVNVFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA--------- 274
           S +  V++  A + S+G  K   + +G +VK+G +  +  F+ ++ I  YA         
Sbjct: 558 SEVMMVDLLSASARSVGSSKGLQL-HGTIVKMGFDCYD--FLQATIIHFYAVSNNLKLAL 614

Query: 275 ----------------------ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
                                 + G  + AR++FD   +++   WN M+ GY Q+  P  
Sbjct: 615 QQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSWNAMMSGYAQSLSPQL 674

Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI 372
           A+ LF +++   ++  D +T +S  SA+S L  L+ G++ H Y+ ++ +     ++ A+I
Sbjct: 675 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLNRSSIPPNDNLIAAII 734

Query: 373 E------------------RDVVS-----WNTMISAFVQNGLDDEGLMLVYEMQKQGFMI 409
                              +++ S     WN +I     +G     L L  ++Q      
Sbjct: 735 NMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKP 794

Query: 410 DSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQ 466
           +S+T   +LSA  +    ++GK     +   HGI  + ++ Y  ++D+  KSG ++ A++
Sbjct: 795 NSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD-IKHYGCMVDLLGKSGKLEEAKE 853

Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNG 492
           +  KN     D   W  +++    +G
Sbjct: 854 MI-KNMPVKADVMIWGMLLSASRIHG 878



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 175/415 (42%), Gaps = 41/415 (9%)

Query: 24  LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
           L     L   +P+    T    L+   + G    A++LFD IT    V W T+I G +  
Sbjct: 478 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMIDGCLRK 537

Query: 84  NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
           N   EA++ Y++M +     S        +L A A +     G  +H   ++   +   F
Sbjct: 538 NQLDEALVYYTEMLRRGMKPS--EVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCYDF 595

Query: 144 VYNSLLNMYSTC-----------------LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
           +  ++++ Y+                   ++S +A + G     V     +   +VFD  
Sbjct: 596 LQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGF----VKNGMVEQAREVFDQT 651

Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSA 245
           R +++ +WN ++S Y ++     A+  FR M+    ++P  I+ V+VF A+SSLG  +  
Sbjct: 652 RDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 711

Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF---DNCLERNTEVWNTMIG 302
              +  L +  S   ND  +A + I MYA+ G  + A  IF    N        WN +I 
Sbjct: 712 KRAHEYLNR-SSIPPNDNLIA-AIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIIC 769

Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
           G   + H   A++L+  +  L  I  + +TF+  LSA      ++LG+     +  +   
Sbjct: 770 GSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH-- 826

Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ-KQGFMIDSVTVTA 416
                    IE D+  +  M+    ++G  +E   ++  M  K   MI  + ++A
Sbjct: 827 --------GIEPDIKHYGCMVDLLGKSGKLEEAKEMIKNMPVKADVMIWGMLLSA 873



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 31/145 (21%)

Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF--- 571
            + S L +C    ++  G+Q+HG  ++   D N F+  S+++MY+K  ++  A +VF   
Sbjct: 297 ALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAH 356

Query: 572 AKI----------------------------PEKNSVTYTTMILGYGQHGMSERALSLFR 603
           AK+                            PE++ V+YTT+I GY Q+     A+ LFR
Sbjct: 357 AKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 416

Query: 604 SMKGCGIEPDAITFVAVLSACSYAG 628
            M+  GI  + +T   V+SACS+ G
Sbjct: 417 EMRNLGIMLNEVTLATVISACSHLG 441


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 218/748 (29%), Positives = 356/748 (47%), Gaps = 126/748 (16%)

Query: 110 YSSVLKACAETR--NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLK 167
           Y++ L+ C   R  +L++ +AVH + I     P   + N L+++Y  C SS   E+   +
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVY--CKSS---ELNYAR 69

Query: 168 YVEVDYSKYDLV---------CKVFD-TMRR----------RNVVAWNTIVSWYVKTERY 207
            +  + S+ D +         C   D T+ R          R+ V +N +++ +      
Sbjct: 70  QLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG 129

Query: 208 VEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADV-VYGLLVKLGSEYVNDLFVA 266
             A+  F  M   G +P   +F +V   L+ + D +   V  +   +K G+ Y+    V+
Sbjct: 130 YSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITS--VS 187

Query: 267 SSAIFMYAELGC----FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
           ++ + +Y++          ARK+FD  LE++   W TM+ GYV+N +             
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY------------- 234

Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTM 382
                                   DLG++L   +  N                +V++N M
Sbjct: 235 -----------------------FDLGEELLEGMDDNM--------------KLVAYNAM 257

Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH-- 440
           IS +V  G   E L +V  M   G  +D  T  +++ A +      +GKQ HAY+LR   
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317

Query: 441 -GIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
              HF+   + L+ +Y K G    AR IFEK  +  +D  +WNA+++GY  +G + EA +
Sbjct: 318 FSFHFD---NSLVSLYYKCGKFDEARAIFEKMPA--KDLVSWNALLSGYVSSGHIGEAKL 372

Query: 500 AFRQMLEHNVTPNVVTIASV-------------------------------LPACNPMGN 528
            F++M E N+   ++ I+ +                               + +C  +G 
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432

Query: 529 IELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
              G+Q H   ++   D ++  G +LI MY+K GV+  A  VF  +P  +SV++  +I  
Sbjct: 433 YCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAA 492

Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP 648
            GQHG    A+ ++  M   GI PD IT + VL+ACS+AGLVD+G + FD M+  Y+I P
Sbjct: 493 LGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPP 552

Query: 649 STEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKK 708
             +HY  + D+L R GK  +A   ++ L  +    EIW +LL  CR+HG+ EL  + A K
Sbjct: 553 GADHYARLIDLLCRSGKFSDAESVIESLPFKPTA-EIWEALLSGCRVHGNMELGIIAADK 611

Query: 709 LLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRF 768
           L  +   +   G ++LLSN++A  G WE V +VRK MR+RG++KEV CSWI++   V+ F
Sbjct: 612 LFGLIPEHD--GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTF 669

Query: 769 ASKDQEHPQSHKIYEMLERLAMEMRNAG 796
              D  HP++  +Y  L+ L  EMR  G
Sbjct: 670 LVDDTSHPEAEAVYIYLQDLGKEMRRLG 697



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 259/592 (43%), Gaps = 84/592 (14%)

Query: 46  LSKICQEGRPHLARQLFDS--ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
           +S  C  G   LAR +F+   +    TV++N +I GF  NN  Y AI L+ +MK      
Sbjct: 87  VSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG--F 144

Query: 104 SCDNYTYSSVLKACA-ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSS---- 158
             DN+T++SVL   A    + +     H   ++  +     V N+L+++YS C SS    
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204

Query: 159 LDAEMVGLKYVEVD----------YSK---YDLVCKVFDTMRRR-NVVAWNTIVSWYVKT 204
             A  V  + +E D          Y K   +DL  ++ + M     +VA+N ++S YV  
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNR 264

Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
             Y EA+   R M+  GI     ++ +V  A ++ G  +    V+  +++          
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED---FSFH 321

Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
             +S + +Y + G FD AR IF+    ++   WN ++ GYV + H  EA  +F ++ E  
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE-- 379

Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMIS 384
                                                            ++++SW  MIS
Sbjct: 380 -------------------------------------------------KNILSWMIMIS 390

Query: 385 AFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF 444
              +NG  +EGL L   M+++GF       +  + + + L     G+Q HA LL+ G   
Sbjct: 391 GLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS 450

Query: 445 E-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQ 503
                + LI MYAK G+++ ARQ+F        D  +WNA+IA   Q+G   EA   + +
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPC--LDSVSWNALIAALGQHGHGAEAVDVYEE 508

Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSG 562
           ML+  + P+ +T+ +VL AC+  G ++ G++        Y +         LID+  +SG
Sbjct: 509 MLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSG 568

Query: 563 VINYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
             + A +V   +P K +   +  ++ G   HG  E  L +  + K  G+ P+
Sbjct: 569 KFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME--LGIIAADKLFGLIPE 618


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 186/571 (32%), Positives = 286/571 (50%), Gaps = 88/571 (15%)

Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
           D FVASS +  Y   G    AR + D    R    W+ +I  +  +     A  L     
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGL----- 108

Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNT 381
            L+ +  D V                                         E +V++WN 
Sbjct: 109 -LERMRSDGV-----------------------------------------EPNVITWNG 126

Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
           ++S   ++G   + ++ +  M  +GF+ D+  V+  LSA  ++ +  VG+Q H Y+++ G
Sbjct: 127 LVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAG 186

Query: 442 IHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA--- 497
              +  + + LIDMY K G      ++F+  +S   D A+ NA++AG ++N  + EA   
Sbjct: 187 CRLDACVATALIDMYGKCGRADEIVRVFD--ESSHMDVASCNALVAGLSRNAQVSEALRL 244

Query: 498 ---FVA-----------------------------FRQMLEHNVTPNVVTIASVLPACNP 525
              FV                              FR+M    + PN VTI  VLPA   
Sbjct: 245 FREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFAN 304

Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
           +  +  G+  H FS+R     +++VG++L+DMY+K G +  A  +F  +P +N V++  M
Sbjct: 305 IAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAM 364

Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
           I GY  HG +E A+ LFRSM+    +PD +TF  VL ACS AG  +EG   F+ MQ ++ 
Sbjct: 365 IGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHG 424

Query: 646 IQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVV 705
           I P  EHY C+  +LGR GK+ +AY+ + ++  E +   IWGSLLGSCR+HG+  LAEV 
Sbjct: 425 ISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGC-IWGSLLGSCRVHGNVVLAEVA 483

Query: 706 AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYV 765
           A+ L +++  N+  G +VLLSNIYA +  W+ V+++R  M+  GL+KE GCSWI++   V
Sbjct: 484 AENLFQLEPENA--GNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKV 541

Query: 766 NRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
           +   + D  HP    I E L+ L MEMR  G
Sbjct: 542 HMLLAGDSSHPMMAAITEKLKHLTMEMRRLG 572



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 180/413 (43%), Gaps = 66/413 (15%)

Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
           NV+ WN +VS   ++ R  +AV     M   G  P          A+  +GD    + ++
Sbjct: 120 NVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVAVGEQLH 179

Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
           G +VK G     D  VA++ I MY + G  D   ++FD     +    N ++ G  +N  
Sbjct: 180 GYVVKAGCRL--DACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALVAGLSRNAQ 237

Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
             EA+ LF                                        + FV        
Sbjct: 238 VSEALRLF----------------------------------------REFVGRG----- 252

Query: 370 AVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
             IE +VVSW ++++  VQNG D E + L  EMQ +G   +SVT+  +L A +N+     
Sbjct: 253 --IELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMH 310

Query: 430 GKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGY 488
           G+  H + LR G H +  + S L+DMYAK G ++ AR IFE      R+  +WNAMI GY
Sbjct: 311 GRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPY--RNVVSWNAMIGGY 368

Query: 489 TQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL-------HGFSIR 541
             +G  E A   FR M      P++VT   VL AC+  G  E G+         HG S R
Sbjct: 369 AMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPR 428

Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHG 593
             ++        ++ +  ++G ++ A ++  ++P E +   + +++     HG
Sbjct: 429 --MEHY----ACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHG 475



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 22/308 (7%)

Query: 52  EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
           EG   L  ++      P  + WN ++ G   +    +A+L   +M         D    S
Sbjct: 103 EGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLP--DATGVS 160

Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------------- 155
             L A  +  ++ +G+ +H + ++        V  +L++MY  C                
Sbjct: 161 CALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHM 220

Query: 156 -LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
            ++S +A + GL           L  +        NVV+W +IV+  V+  R +EAV  F
Sbjct: 221 DVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLF 280

Query: 215 RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA 274
           R M   GI P++++   V PA +++         +   ++ G  + +D++V S+ + MYA
Sbjct: 281 REMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKG--FHHDIYVGSALVDMYA 338

Query: 275 ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFL 334
           + G    AR IF+    RN   WN MIGGY  +     A+ LF + ++  +   D VTF 
Sbjct: 339 KCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLF-RSMQSSKEKPDLVTFT 397

Query: 335 SALSAVSQ 342
             L A SQ
Sbjct: 398 CVLGACSQ 405



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 20/184 (10%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           L R+          V W +I+   V N    EA+ L+ +M+  S     ++ T   VL A
Sbjct: 244 LFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQ--SEGIEPNSVTIPCVLPA 301

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
            A    L  G++ HC  +R   +   +V ++L++MY+ C    DA M             
Sbjct: 302 FANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARM------------- 348

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
                +F+ M  RNVV+WN ++  Y        AVR FR M     +P  ++F  V  A 
Sbjct: 349 -----IFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGAC 403

Query: 237 SSLG 240
           S  G
Sbjct: 404 SQAG 407



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)

Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
           + ++ FV +SL+  Y + G    A +V   +P +  V ++ +I  +  HG +E A  L  
Sbjct: 51  VSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLE 110

Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRV 663
            M+  G+EP+ IT+  ++S  + +G   + +     M  E    P      C    +G V
Sbjct: 111 RMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGE-GFLPDATGVSCALSAVGDV 169

Query: 664 GKVV 667
           G V 
Sbjct: 170 GDVA 173


>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
 gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
          Length = 657

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 178/516 (34%), Positives = 294/516 (56%), Gaps = 31/516 (6%)

Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
           D  +A  ++GL V  G  Y  D FVAS+   +Y +L   D ARK+FD     +T +WNT+
Sbjct: 129 DAAAARTLHGLSVAAG--YAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTL 186

Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
           + G   +     A+E FV+++E+  +  D  T  S+L A ++   + +G+ +H Y +K  
Sbjct: 187 LAGLPGS----VALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCG 242

Query: 361 VALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVY 400
           +A    V+  ++                    + D+V++N +IS +  NG+ +  + L  
Sbjct: 243 LAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFK 302

Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-LIDMYAKSG 459
           E+    +  +S T+ A++   S   ++ + +  HA++++  +  + + S  L  +Y +  
Sbjct: 303 ELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLN 362

Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
            +++AR IF+     ++   +WNAMI+GY QNGL E A   F+ M E NV PN  TI+S 
Sbjct: 363 DMESARSIFDAMP--EKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISST 420

Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
           L AC  +G + LG  +H    +  L+ NV+V T+LIDMY+K G I  A ++F ++  KN 
Sbjct: 421 LSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480

Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
           V++  MI GYG HG    AL L++SM    I P + TF++VL ACS+ GLVDEG ++F +
Sbjct: 481 VSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRV 540

Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
           M  EY+I P  EH  C+ D+LGR GK+ EA + + E  +      +WG+LL +C +H +S
Sbjct: 541 MTNEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNS 600

Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNW 735
           +LA++ ++KL E+D+ N+  GY+VLLSN+Y  + ++
Sbjct: 601 DLAKLASQKLFELDSENA--GYYVLLSNLYTSKKHY 634



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 206/455 (45%), Gaps = 54/455 (11%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           AR++FD++  P T++WNT++ G    ++  EA +   ++ +  P    D+ T +S L+A 
Sbjct: 168 ARKVFDAVPSPDTILWNTLLAGLP-GSVALEAFVRMVEVGRVRP----DSTTLASSLRAA 222

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           AE  ++ +G+ VH + ++C       V   L+++YS C                     D
Sbjct: 223 AEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKC------------------GDMD 264

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
               +FD M   ++VA+N ++S Y        +V  F+ +     RP++ + V V P  S
Sbjct: 265 CARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYS 324

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
             G    A  ++  +VK  +    D  V+++   +Y  L   + AR IFD   E+  E W
Sbjct: 325 PFGHELLARCLHAFVVK--ARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESW 382

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
           N MI GY QN     A+ELF  + EL+ +  +  T  S LSA +QL  L LG  +H  I 
Sbjct: 383 NAMISGYAQNGLTEMAVELFQLMQELN-VQPNPTTISSTLSACAQLGALSLGTWVHRIIA 441

Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
           K  + L V V+ A+I+                    ++VVSWN MIS +  +G   E L 
Sbjct: 442 KENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALK 501

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ-----THAYLLRHGIHFEGMESYLI 452
           L   M     +  S T  ++L A S+    D G++     T+ Y +  GI      + ++
Sbjct: 502 LYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEH---CTCMV 558

Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
           D+  ++G +  A  +  +          W A+++ 
Sbjct: 559 DLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSA 593



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 208/427 (48%), Gaps = 34/427 (7%)

Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNV 232
           SK D   KVFD +   + + WNT+++    +     A+  F  M+ +G +RP + +  + 
Sbjct: 163 SKVDDARKVFDAVPSPDTILWNTLLAGLPGS----VALEAFVRMVEVGRVRPDSTTLASS 218

Query: 233 FPALSSLGDYKSADVVYGLLVKLG-SEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
             A +          V+G  VK G +E+ +   V +  + +Y++ G  D AR +FD   +
Sbjct: 219 LRAAAEASHVAMGRCVHGYGVKCGLAEHEH---VVTGLMSLYSKCGDMDCARSLFDRMED 275

Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
            +   +N +I GY  N     ++ELF + L   +   +  T ++ +   S      L + 
Sbjct: 276 PDLVAYNALISGYSVNGMVESSVELFKE-LAASDWRPNSSTLVAVIPVYSPFGHELLARC 334

Query: 352 LHAYIIKNFV--------ALPVI------------VLNAVIERDVVSWNTMISAFVQNGL 391
           LHA+++K  +        AL  +            + +A+ E+ + SWN MIS + QNGL
Sbjct: 335 LHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQNGL 394

Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESY 450
            +  + L   MQ+     +  T+++ LSA + L    +G   H  + +  +     + + 
Sbjct: 395 TEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTA 454

Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
           LIDMYAK G I  AR IF++ D  +++  +WNAMI+GY  +G   EA   ++ ML+  + 
Sbjct: 455 LIDMYAKCGSIAEARSIFDRMD--NKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACIL 512

Query: 511 PNVVTIASVLPACNPMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
           P   T  SVL AC+  G ++ G+++    +  Y +   +   T ++D+  ++G +N A +
Sbjct: 513 PTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEALD 572

Query: 570 VFAKIPE 576
           + ++ P+
Sbjct: 573 LISEFPQ 579



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 163/376 (43%), Gaps = 39/376 (10%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSS--PYTSCDNYTYSSVLK 115
           AR LFD +  P  V +N +I G+  N +   ++ L+ ++  S   P +S    T  +V+ 
Sbjct: 266 ARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSS----TLVAVIP 321

Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
             +   +  + + +H   ++   +    V  +L  +Y              +  +++ ++
Sbjct: 322 VYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYC-------------RLNDMESAR 368

Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
                 +FD M  + + +WN ++S Y +      AV  F++M  + ++P+  +  +   A
Sbjct: 369 -----SIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSA 423

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            + LG       V+ ++ K   E   +++V ++ I MYA+ G    AR IFD    +N  
Sbjct: 424 CAQLGALSLGTWVHRIIAKENLEL--NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVV 481

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI GY  +    EA++L+  +L+   I+    TFLS L A S    +D GQ++   
Sbjct: 482 SWNAMISGYGLHGRGAEALKLYKSMLD-ACILPTSSTFLSVLYACSHGGLVDEGQKVFRV 540

Query: 356 IIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVT 415
           +   +   P           +     M+    + G  +E L L+ E  +    I      
Sbjct: 541 MTNEYRISP----------GIEHCTCMVDLLGRAGKLNEALDLISEFPQSA--IGPGVWG 588

Query: 416 ALLSAASNLRNQDVGK 431
           ALLSA    +N D+ K
Sbjct: 589 ALLSACMVHKNSDLAK 604


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 179/592 (30%), Positives = 326/592 (55%), Gaps = 32/592 (5%)

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
           L  L D K    ++  ++  G    ++ F+++S +  Y   G    A++IF +   +N  
Sbjct: 31  LRKLKDLKPLQQIHAQIITSG--LTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            W  +I G  +N+  VEAI++F + + +     + VT  S L A + L  + + + +H +
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFRE-MTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCF 147

Query: 356 IIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEG 395
            ++      V V  A++                    ER+VVSWN ++S +  +G  +E 
Sbjct: 148 WVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEA 207

Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
           + L   M+++G ++D  T+ +L+ A+ ++    VG   H +++R G   +  +++ L+D+
Sbjct: 208 IDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDI 267

Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE-HNVTPNV 513
           Y     +  A ++F  ++   +D A W  M+ G++     + A   F +ML   N+  + 
Sbjct: 268 YVSHNCVDDAHRVF--SEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDS 325

Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
           + +  +L +C+  G ++ G+++H  +I+     N+FVG+++IDMY+  G +  A   F  
Sbjct: 326 IVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYG 385

Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
           + EK+ V +  MI G G +G    A+ LF  MKG G++PD  TFV+VL ACS+AG+V EG
Sbjct: 386 MGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEG 445

Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
           LQIF  M +     P+ +HY CV D+LGR G++  AY F+  +  + +  +++ +LLG+C
Sbjct: 446 LQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPD-FDVYSTLLGAC 504

Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
           R+HG+ +L   +++K+ EM+  ++  GY+VLLSN+YA  GNWE V   R  +R + L+K+
Sbjct: 505 RIHGNIKLGHEISQKIFEMEPNDA--GYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKD 562

Query: 754 VGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKTIQNSNV 805
            G S I++   +  F + +++HPQ  KI  +L+ L ++++ AG   + N+NV
Sbjct: 563 PGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAG--YVPNTNV 612



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 253/540 (46%), Gaps = 56/540 (10%)

Query: 109 TYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
           +++S+L+   + ++L+  + +H   I      + F+ NSL+N Y  C    DA+      
Sbjct: 26  SHASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAK------ 76

Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
                       ++F     +NVV+W  ++S   K + +VEA+  FR M     +P+ ++
Sbjct: 77  ------------QIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVT 124

Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
             +V PA ++LG  + A  V+   V+ G E   ++FV ++ + MY++ GC   AR++F++
Sbjct: 125 ISSVLPAFANLGLIRIAKSVHCFWVRGGFE--GNVFVETALVDMYSKFGCMGVARQLFES 182

Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
             ERN   WN ++ GY  +    EAI+LF  ++    ++ D  T +S + A   +  L +
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQV 241

Query: 349 GQQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
           G  +H +II+                    N V     V + +  +DV +W  M++ F  
Sbjct: 242 GTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSS 301

Query: 389 NGLDDEGLMLVYEMQK-QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---F 444
               D  +    +M   Q   +DS+ +  +LS+ S+      G++ HA  ++       F
Sbjct: 302 GRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIF 361

Query: 445 EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
            G  S +IDMYA  G ++ A++ F     G++D   WNAMIAG   NG   +A   F QM
Sbjct: 362 VG--SAVIDMYANCGNLEDAKRFFY--GMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417

Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD-QNVFVGTSLIDMYSKSGV 563
               + P+  T  SVL AC+  G +  G Q+    ++   D  N+     +ID+  ++G 
Sbjct: 418 KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQ 477

Query: 564 INYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
           ++ A +    +P + +   Y+T++     HG  +    +  S K   +EP+   +  +LS
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI--SQKIFEMEPNDAGYYVLLS 535



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 218/498 (43%), Gaps = 76/498 (15%)

Query: 58  ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
           A+Q+F        V W  +I G   N+   EAI ++ +M   +     +  T SSVL A 
Sbjct: 75  AKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGN--FKPNAVTISSVLPAF 132

Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
           A    +RI K+VHC ++R     + FV  +L++MYS                   +    
Sbjct: 133 ANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSK------------------FGCMG 174

Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
           +  ++F++M  RNVV+WN IVS Y       EA+  F +M R G+     + +++ PA  
Sbjct: 175 VARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234

Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
           S+G  +    ++G +++ G  Y ND  + ++ + +Y    C D A ++F     ++   W
Sbjct: 235 SVGCLQVGTGIHGFIIRTG--YENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAW 292

Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
             M+ G+    H   AI+ F ++L +  +  D +  +  LS+ S    L  G+++HA  I
Sbjct: 293 TLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAI 352

Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
           K   A  + V +AVI                    E+DVV WN MI+    NG   + + 
Sbjct: 353 KTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAID 412

Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
           L  +M+  G   D  T  ++L A S           HA     G+ +EG++ +       
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACS-----------HA-----GMVYEGLQIFY------ 450

Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
             ++KT+  I         +   +  +I    + G L+ A+     M      P+    +
Sbjct: 451 -HMVKTSHDI--------PNLQHYACVIDILGRAGQLDAAYSFINNM---PFQPDFDVYS 498

Query: 518 SVLPACNPMGNIELGKQL 535
           ++L AC   GNI+LG ++
Sbjct: 499 TLLGACRIHGNIKLGHEI 516



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 149/309 (48%), Gaps = 24/309 (7%)

Query: 57  LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
           +ARQLF+S++    V WN I+ G+  +    EAI L++ M++       D YT  S++ A
Sbjct: 175 VARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLV--DFYTIMSLIPA 232

Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
                 L++G  +H   IR      + +  +L+++Y                  V ++  
Sbjct: 233 SLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY------------------VSHNCV 274

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRPSTISFVNVFPA 235
           D   +VF  M  ++V AW  +++ +     +  A++ F  ML +  ++  +I  + +  +
Sbjct: 275 DDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSS 334

Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
            S  G  +    V+ L +K  + + N++FV S+ I MYA  G  + A++ F    E++  
Sbjct: 335 CSHSGALQQGRRVHALAIK--TCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
            WN MI G   N +  +AI+LF+Q ++   +  D+ TF+S L A S    +  G Q+  +
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQ-MKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451

Query: 356 IIKNFVALP 364
           ++K    +P
Sbjct: 452 MVKTSHDIP 460


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 301/542 (55%), Gaps = 43/542 (7%)

Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN-NHPVEAIELFVQ 319
           N++  ++  I  Y   G  D A ++F++   ++T  WN+++  + +   H   A +LF +
Sbjct: 39  NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEK 98

Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN----FVALPVIVLNAVIERD 375
           + + + + ++                + L    H   + +    F ++P+        +D
Sbjct: 99  IPQPNTVSYN----------------IMLACHWHHLGVHDARGFFDSMPL--------KD 134

Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQT-H 434
           V SWNTMISA  Q GL  E   L   M ++    + V+ +A++S      + D   +  +
Sbjct: 135 VASWNTMISALAQVGLMGEARRLFSAMPEK----NCVSWSAMVSGYVACGDLDAAVECFY 190

Query: 435 AYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
           A  +R  I +  M    I  Y K G ++ A ++F+  +   R   TWNAMIAGY +NG  
Sbjct: 191 AAPMRSVITWTAM----ITGYMKFGRVELAERLFQ--EMSMRTLVTWNAMIAGYVENGRA 244

Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
           E+    FR MLE  V PN +++ SVL  C+ +  ++LGKQ+H    +  L  +   GTSL
Sbjct: 245 EDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSL 304

Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
           + MYSK G +  A  +F +IP K+ V +  MI GY QHG  ++AL LF  MK  G++PD 
Sbjct: 305 VSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDW 364

Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVK 674
           ITFVAVL AC++AGLVD G+Q F+ M++++ I+   EHY C+ D+LGR GK+ EA + +K
Sbjct: 365 ITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIK 424

Query: 675 ELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGN 734
            +  + +   I+G+LLG+CR+H +  LAE  AK LLE+D   ++   +V L+N+YA +  
Sbjct: 425 SMPFKPHP-AIYGTLLGACRIHKNLNLAEFAAKNLLELDP--TIATGYVQLANVYAAQNR 481

Query: 735 WENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
           W++V  +R+ M++  + K  G SWI++   V+ F S D+ HP+   I+E L+ L  +M+ 
Sbjct: 482 WDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKL 541

Query: 795 AG 796
           AG
Sbjct: 542 AG 543



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 202/415 (48%), Gaps = 38/415 (9%)

Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
           D   +VF+ M+ ++ V WN+I++ + K   + E  RQ   +     +P+T+S+ N+  A 
Sbjct: 58  DSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQ---LFEKIPQPNTVSY-NIMLAC 113

Query: 237 --SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
               LG + +      + +K       D+   ++ I   A++G    AR++F    E+N 
Sbjct: 114 HWHHLGVHDARGFFDSMPLK-------DVASWNTMISALAQVGLMGEARRLFSAMPEKNC 166

Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
             W+ M+ GYV       A+E F         +   +T+ + ++   +   ++L ++L  
Sbjct: 167 VSWSAMVSGYVACGDLDAAVECFYAA-----PMRSVITWTAMITGYMKFGRVELAERL-- 219

Query: 355 YIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTV 414
                           +  R +V+WN MI+ +V+NG  ++GL L   M + G   +++++
Sbjct: 220 -------------FQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266

Query: 415 TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME-SYLIDMYAKSGLIKTARQIFEKNDS 473
           T++L   SNL    +GKQ H  + +  +  +    + L+ MY+K G +K A ++F +   
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPR 326

Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
             +D   WNAMI+GY Q+G  ++A   F +M +  + P+ +T  +VL ACN  G ++LG 
Sbjct: 327 --KDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGV 384

Query: 534 QLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK-NSVTYTTMI 586
           Q      R + ++        ++D+  ++G ++ A ++   +P K +   Y T++
Sbjct: 385 QYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLL 439



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 150/343 (43%), Gaps = 37/343 (10%)

Query: 21  PPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGF 80
           P        L   IP+  T +    L+        H AR  FDS+       WNT+I   
Sbjct: 86  PGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISAL 145

Query: 81  VCNNLPYEAILLYSQMKKSSPYTSCDNYT-YSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
               L  EA  L+S M    P  +C +++   S   AC +     +  AV C +    + 
Sbjct: 146 AQVGLMGEARRLFSAM----PEKNCVSWSAMVSGYVACGD-----LDAAVECFY----AA 192

Query: 140 PSRFV--YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTI 197
           P R V  + +++  Y                  + + + +L  ++F  M  R +V WN +
Sbjct: 193 PMRSVITWTAMITGY------------------MKFGRVELAERLFQEMSMRTLVTWNAM 234

Query: 198 VSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGS 257
           ++ YV+  R  + +R FR ML  G++P+ +S  +V    S+L   +    V+ L+ K   
Sbjct: 235 IAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK--C 292

Query: 258 EYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF 317
              +D    +S + MY++ G    A ++F     ++   WN MI GY Q+    +A+ LF
Sbjct: 293 PLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLF 352

Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
            + ++ + +  D +TF++ L A +    +DLG Q    + ++F
Sbjct: 353 DE-MKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDF 394


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.135    0.403 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,619,180,513
Number of Sequences: 23463169
Number of extensions: 535941842
Number of successful extensions: 3460760
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9492
Number of HSP's successfully gapped in prelim test: 3021
Number of HSP's that attempted gapping in prelim test: 3153306
Number of HSP's gapped (non-prelim): 104293
length of query: 813
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 662
effective length of database: 8,816,256,848
effective search space: 5836362033376
effective search space used: 5836362033376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)