BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046631
(813 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/791 (63%), Positives = 633/791 (80%), Gaps = 32/791 (4%)
Query: 23 QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
Q + SPP +TP+IRSRLSKICQ+G P LARQLFD+I +PTTV+WNTIIIGF+C
Sbjct: 23 QTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFIC 82
Query: 83 NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
NNLP+EA+L YS+MKK++P+T+CD YTYSS LKACAET+NL+ GKAVHCH IRC N SR
Sbjct: 83 NNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSR 142
Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
V+NSL+NMY +CL++ D +YD+V KVFD MRR+NVVAWNT++SWYV
Sbjct: 143 VVHNSLMNMYVSCLNAPDC------------FEYDVVRKVFDNMRRKNVVAWNTLISWYV 190
Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
KT R EA RQF +M+RM ++PS +SFVNVFPA+S K A+V YGL++KLG EYV D
Sbjct: 191 KTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKD 250
Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
LFV SSAI MYAELG + +R++FD+C+ERN EVWNTMIG YVQN+ VE+IELF++ +
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
EIV D+VT+L A SAVS LQ+++LG+Q H ++ KNF LP++++N+++
Sbjct: 311 SKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF ID +TVTALLSAAS
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
NLRN+++GKQTHA+L+R GI FEGM SYLIDMY+KSGLI+ ++++FE + +RDQATWN
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
+MI+GYTQNG E+ F+ FR+MLE N+ PN VT+AS+LPAC+ +G+++LGKQLHGFSIR
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550
Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
LDQNVFV ++L+DMYSK+G I YA ++F++ E+NSVTYTTMILGYGQHGM ERA+SLF
Sbjct: 551 YLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLF 610
Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
SM+ GI+PDAITFVAVLSACSY+GL+DEGL+IF+ M++ Y IQPS+EHYCC+ DMLGR
Sbjct: 611 LSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGR 670
Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
VG+V EAYEFVK LGEEGN+ E+WGSLLGSC+LHG ELAE V+++L + D + GY
Sbjct: 671 VGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYE 730
Query: 723 VLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIY 782
VLLSN+YAEE W++VDKVR+ MRE+GL+KEVG S I++ GYVN F S+DQEHP S +IY
Sbjct: 731 VLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Query: 783 EMLERLAMEMR 793
++++ LA +MR
Sbjct: 791 DVIDGLAKDMR 801
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/833 (32%), Positives = 446/833 (53%), Gaps = 77/833 (9%)
Query: 5 SVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDS 64
S PL P+ P P QL P TPT + G P +F S
Sbjct: 2 SCPLAFTFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAP----SIFIS 57
Query: 65 ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
+R + W ++ V +NL EA+L Y M DNY + ++LKA A+ +++
Sbjct: 58 QSR-SPEWWIDLLRSKVRSNLLREAVLTYVDMIVLG--IKPDNYAFPALLKAVADLQDME 114
Query: 125 IGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVF 183
+GK +H H + + S V N+L+N+Y C + V KVF
Sbjct: 115 LGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC------------------GDFGAVYKVF 156
Query: 184 DTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSL---- 239
D + RN V+WN+++S E++ A+ FR ML + PS+ + V+V A S+L
Sbjct: 157 DRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 240 GDYKSADV-VYGLLV-KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
G V YGL +L S F+ ++ + MY +LG ++ + + R+ W
Sbjct: 217 GLMMGKQVHAYGLRKGELNS------FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
NT++ QN +EA+E +++ + L+ + D+ T S L A S L+ L G++LHAY +
Sbjct: 271 NTVLSSLCQNEQLLEALE-YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 358 KN-------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
KN FV ++ V + + +R + WN MI+ + QN D E L
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 397 MLVYEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDM 454
+L M++ G + +S T+ ++ A + H ++++ G+ + +++ L+DM
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDM 449
Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVT-- 510
Y++ G I A +IF K + DRD TWN MI GY + E+A + +M LE V+
Sbjct: 450 YSRLGKIDIAMRIFGKME--DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKG 507
Query: 511 -------PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
PN +T+ ++LP+C + + GK++H ++I+ L +V VG++L+DMY+K G
Sbjct: 508 ASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGC 567
Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
+ + VF +IP+KN +T+ +I+ YG HG + A+ L R M G++P+ +TF++V +A
Sbjct: 568 LQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAA 627
Query: 624 CSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVL 683
CS++G+VDEGL+IF +M+ +Y ++PS++HY CV D+LGR G++ EAY+ + + + N
Sbjct: 628 CSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKA 687
Query: 684 EIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRK 743
W SLLG+ R+H + E+ E+ A+ L++++ ++ ++VLL+NIY+ G W+ +VR+
Sbjct: 688 GAWSSLLGASRIHNNLEIGEIAAQNLIQLEP--NVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 744 EMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
M+E+G+RKE GCSWI+ G V++F + D HPQS K+ LE L MR G
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEG 798
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/756 (31%), Positives = 412/756 (54%), Gaps = 48/756 (6%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A ++FD + T WNT+I +V N P A+ LY M+ ++ ++LKAC
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS--SFPALLKAC 192
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A+ R++R G +H ++ + + F+ N+L++MY+ K ++ ++
Sbjct: 193 AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA-------------KNDDLSAAR-- 237
Query: 178 LVCKVFDTMRRR-NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
++FD + + + V WN+I+S Y + + +E + FR M G P++ + V+ A
Sbjct: 238 ---RLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
K ++ ++K S + ++L+V ++ I MY G A +I +
Sbjct: 295 DGFSYAKLGKEIHASVLK-SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353
Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
WN++I GYVQN EA+E F ++ D+V+ S ++A +L L G +LHAY+
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKS-DEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 357 IKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGL 396
IK+ + V N +I+ +D++SW T+I+ + QN E L
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
L ++ K+ ID + + ++L A+S L++ + K+ H ++LR G+ +++ L+D+Y
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532
Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
K + A ++FE +D +W +MI+ NG EA FR+M+E ++ + V +
Sbjct: 533 KCRNMGYATRVFESIKG--KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVAL 590
Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
+L A + + G+++H + +R + +++DMY+ G + A VF +I
Sbjct: 591 LCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
K + YT+MI YG HG + A+ LF M+ + PD I+F+A+L ACS+AGL+DEG
Sbjct: 651 KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 710
Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
+M+ EY+++P EHY C+ DMLGR VVEA+EFVK + E E+W +LL +CR H
Sbjct: 711 LKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA-EVWCALLAACRSH 769
Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
E+ E+ A++LLE++ +N PG VL+SN++AE+G W +V+KVR +M+ G+ K GC
Sbjct: 770 SEKEIGEIAAQRLLELEPKN--PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGC 827
Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
SWI++ G V++F ++D+ HP+S +IYE L + ++
Sbjct: 828 SWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKL 863
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 196/385 (50%), Gaps = 26/385 (6%)
Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
F+A +FMY + G D A K+FD +R WNTMIG YV N P A+ L+ + +
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN-MRV 175
Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------- 372
+ + +F + L A ++L+++ G +LH+ ++K ++NA++
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 373 ----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
+ D V WN+++S++ +G E L L EM G +S T+ + L+A
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 423 NLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
+GK+ HA +L+ H + + LI MY + G + A +I + ++ D T
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNA--DVVT 353
Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
WN++I GY QN + +EA F M+ + V++ S++ A + N+ G +LH + I
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI 413
Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
++ D N+ VG +LIDMYSK + Y F ++ +K+ +++TT+I GY Q+ AL
Sbjct: 414 KHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 601 LFRSMKGCGIEPDAITFVAVLSACS 625
LFR + +E D + ++L A S
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASS 498
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 166/342 (48%), Gaps = 45/342 (13%)
Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
+NN PVEA F VLEL AVSQ G+QLH+ I K F + +
Sbjct: 75 ENNSPVEA---FAYVLEL----------CGKRRAVSQ------GRQLHSRIFKTFPSFEL 115
Query: 366 ---------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
V + + +R +WNTMI A+V NG L L + M+
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175
Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKT 463
+G + + ALL A + LR+ G + H+ L++ G H G + + L+ MYAK+ +
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 464 ARQIFEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
AR++F+ + G D WN++++ Y+ +G E FR+M PN TI S L A
Sbjct: 236 ARRLFDGFQEKG--DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA 293
Query: 523 CNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT 581
C+ +LGK++H ++ + ++V +LI MY++ G + A + ++ + VT
Sbjct: 294 CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVT 353
Query: 582 YTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
+ ++I GY Q+ M + AL F M G + D ++ ++++A
Sbjct: 354 WNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 217/480 (45%), Gaps = 55/480 (11%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G+ A ++ + V WN++I G+V N + EA+ +S M + + D + +S
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS--DEVSMTS 391
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
++ A NL G +H + I+ + + V N+L++MYS C
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC----------------- 434
Query: 173 YSKYDLVC---KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
+L C + F M +++++W T+++ Y + + +VEA+ FR + + + +
Sbjct: 435 ----NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMIL 490
Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
++ A S L KS +V + + + + D + + + +Y + +A ++F++
Sbjct: 491 GSILRASSVL---KSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESI 547
Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
++ W +MI N + EA+ELF +++E + D V L LSA + L L+ G
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLSALNKG 606
Query: 350 QQLHAYII-KNF-----VALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
+++H Y++ K F +A+ V+ V + + + ++ + +MI+A+ +
Sbjct: 607 REIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMH 666
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
G + L +M+ + D ++ ALL A S+ D G+ ++ H E
Sbjct: 667 GCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR-GFLKIMEHEYELEPWPE 725
Query: 450 Y---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
+ L+DM ++ + A + F K + W A++A + E +A +++LE
Sbjct: 726 HYVCLVDMLGRANCVVEAFE-FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/720 (33%), Positives = 395/720 (54%), Gaps = 62/720 (8%)
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN-----MYSTCLSSLD 160
D T SVL+ CA++++L+ GK V +FIR + FV +S L MY+ C +
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVD-NFIR----GNGFVIDSNLGSKLSLMYTNCGDLKE 147
Query: 161 AEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM 220
A +VFD ++ + WN +++ K+ + ++ F+ M+
Sbjct: 148 AS------------------RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 221 GIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFD 280
G+ + +F V + SSL + ++G ++K G N V +S + Y + D
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVD 247
Query: 281 FARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
ARK+FD ER+ WN++I GYV N + + +FVQ+L + I D T +S +
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGC 306
Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWN 380
+ + + LG+ +H+ +K + N ++ +R VVS+
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
+MI+ + + GL E + L EM+++G D TVTA+L+ + R D GK+ H ++ +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 441 GIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
+ F+ + + L+DMYAK G ++ A +F + +D +WN +I GY++N EA
Sbjct: 427 DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV--KDIISWNTIIGGYSKNCYANEALS 484
Query: 500 AFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLID 556
F +LE +P+ T+A VLPAC + + G+++HG+ +R Y D++ V SL+D
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH--VANSLVD 542
Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
MY+K G + A +F I K+ V++T MI GYG HG + A++LF M+ GIE D I+
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
FV++L ACS++GLVDEG + F++M+ E KI+P+ EHY C+ DML R G +++AY F++ +
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
+ IWG+LL CR+H +LAE VA+K+ E++ N+ GY+VL++NIYAE WE
Sbjct: 663 PIPPDAT-IWGALLCGCRIHHDVKLAEKVAEKVFELEPENT--GYYVLMANIYAEAEKWE 719
Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
V ++RK + +RGLRK GCSWI++ G VN F + D +P++ I L ++ M G
Sbjct: 720 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 155/649 (23%), Positives = 294/649 (45%), Gaps = 90/649 (13%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A ++FD + + WN ++ + +I L+ +M S D+YT+S V K+
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSG--VEMDSYTFSCVSKSF 205
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ R++ G+ +H ++ V NSL+ Y LK VD ++
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY-------------LKNQRVDSAR-- 250
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
KVFD M R+V++WN+I++ YV + + F ML GI + V+VF +
Sbjct: 251 ---KVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
V+ + VK + + + ++ + MY++ G D A+ +F +R+ +
Sbjct: 308 DSRLISLGRAVHSIGVK--ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
+MI GY + EA++LF + +E + I D T + L+ ++ + LD G+++H +I
Sbjct: 366 TSMIAGYAREGLAGEAVKLF-EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
+N + + V NA+++ +D++SWNT+I + +N +E L
Sbjct: 425 ENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALS 484
Query: 398 LV-YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMY 455
L ++++ F D TV +L A ++L D G++ H Y++R+G + + + L+DMY
Sbjct: 485 LFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMY 544
Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
AK G + A +F+ D +D +W MIAGY +G +EA F QM + + + ++
Sbjct: 545 AKCGALLLAHMLFD--DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 516 IASVLPACNPMGNIELGKQLHGFSI---RYLLDQNVFVGTSLIDMYSKSGVINYAANVFA 572
S+L AC+ G ++ G + F+I ++ V ++DM +++G + A
Sbjct: 603 FVSLLYACSHSGLVDEGWRF--FNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 573 KIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE 632
+P I PDA + A+L C V
Sbjct: 661 NMP----------------------------------IPPDATIWGALLCGCRIHHDVKL 686
Query: 633 GLQIFDLMQQEYKIQP-STEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
++ ++ ++++P +T +Y +A++ K + K +G+ G
Sbjct: 687 AEKV---AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 57 LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
LA LFD I V W +I G+ + EAI L++QM+++ D ++ S+L A
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAG--IEADEISFVSLLYA 609
Query: 117 CAET 120
C+ +
Sbjct: 610 CSHS 613
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 247/758 (32%), Positives = 403/758 (53%), Gaps = 58/758 (7%)
Query: 65 ITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLR 124
+ R + WN+II FV N L +A+ Y +M S D T+ ++KAC +N +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFG--VSPDVSTFPCLVKACVALKNFK 155
Query: 125 ----IGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
+ V + C + FV +SL+ Y ++Y K D+
Sbjct: 156 GIDFLSDTVSSLGMDC----NEFVASSLIKAY------------------LEYGKIDVPS 193
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
K+FD + +++ V WN +++ Y K ++ F +M I P+ ++F V +S
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
++GL+V G ++ + +S + MY++ G FD A K+F +T WN M
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
I GYVQ+ E++ F +++ ++ D +TF S L +VS+ + L+ +Q+H YI+++
Sbjct: 312 ISGYVQSGLMEESLTFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 361 VALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVY 400
++L + + +A+I+ DVV + MIS ++ NGL + L +
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSG 459
+ K + +T+ ++L L +G++ H ++++ G + +IDMYAK G
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
+ A +IFE+ RD +WN+MI Q+ A FRQM + + V+I++
Sbjct: 491 RMNLAYEIFER--LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAA 548
Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
L AC + + GK +HGF I++ L +V+ ++LIDMY+K G + A NVF + EKN
Sbjct: 549 LSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNI 608
Query: 580 VTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
V++ ++I G HG + +L LF M + GI PD ITF+ ++S+C + G VDEG++ F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
M ++Y IQP EHY CV D+ GR G++ EAYE VK + + +WG+LLG+CRLH +
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA-GVWGTLLGACRLHKN 727
Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
ELAEV + KL+++D NS GY+VL+SN +A WE+V KVR M+ER ++K G SW
Sbjct: 728 VELAEVASSKLMDLDPSNS--GYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
I++ + F S D HP+S IY +L L E+R G
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 301/608 (49%), Gaps = 45/608 (7%)
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
S +L+AC+ LR GK VH I + + +L MY+ C S D G +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC---GKMFYR 95
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
+D +RR ++ WN+I+S +V+ +A+ + ML G+ P +F
Sbjct: 96 LD-------------LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFP 142
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
+ A +L ++K D + + LG + N+ FVASS I Y E G D K+FD L
Sbjct: 143 CLVKACVALKNFKGIDFLSDTVSSLGMD-CNE-FVASSLIKAYLEYGKIDVPSKLFDRVL 200
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
+++ +WN M+ GY + I+ F V+ +D+I + VTF LS + +DLG
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGF-SVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
QLH ++ + V + N+++ D V+WN MIS +VQ+G
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
L +E L YEM G + D++T ++LL + S N + KQ H Y++RH I + + S
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
LID Y K + A+ IF + +S D + AMI+GY NGL ++ FR +++ +
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNS--VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
+PN +T+ S+LP + ++LG++LHGF I+ D +G ++IDMY+K G +N A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
+F ++ +++ V++ +MI Q A+ +FR M GI D ++ A LSAC+
Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPS 557
Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
G I M + + + + DM + G + A K + +E N++ W S+
Sbjct: 558 ESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVS-WNSI 614
Query: 690 LGSCRLHG 697
+ +C HG
Sbjct: 615 IAACGNHG 622
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 264/546 (48%), Gaps = 48/546 (8%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G+ + +LFD + + VIWN ++ G+ I +S M+ S + T+
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ--ISPNAVTFDC 244
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
VL CA + +G +H + + + NSLL+MYS C
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC----------------- 287
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
++D K+F M R + V WN ++S YV++ E++ F M+ G+ P I+F ++
Sbjct: 288 -GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
P++S + + ++ +++ D+F+ S+ I Y + A+ IF C
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISL--DIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ V+ MI GY+ N ++++E+F ++++ +I +++T +S L + L L LG++L
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGREL 463
Query: 353 HAYIIKNF------VALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLD 392
H +IIK + VI + + +RD+VSWN+MI+ Q+
Sbjct: 464 HGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNP 523
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
+ + +M G D V+++A LSA +NL ++ GK H ++++H + + ES L
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VT 510
IDMYAK G +K A +F+ +++ +WN++IA +G L+++ F +M+E + +
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMK--EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 511 PNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
P+ +T ++ +C +G+++ G + + Y + ++D++ ++G + A
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 701
Query: 570 VFAKIP 575
+P
Sbjct: 702 TVKSMP 707
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 237/487 (48%), Gaps = 49/487 (10%)
Query: 44 SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
S LS + GR A +LF ++R TV WN +I G+V + L E++ + +M S
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
D T+SS+L + ++ NL K +HC+ +R + F+ ++L++ Y C A+
Sbjct: 339 --DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ- 395
Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
+F +VV + ++S Y+ Y++++ FR ++++ I
Sbjct: 396 -----------------NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
P+ I+ V++ P + L K ++G ++K G + N + + I MYA+ G + A
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
+IF+ +R+ WN+MI Q+++P AI++F Q + + I +D V+ +ALSA + L
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQ-MGVSGICYDCVSISAALSACANL 555
Query: 344 QELDLGQQLHAYIIKNFVALPVI--------------------VLNAVIERDVVSWNTMI 383
G+ +H ++IK+ +A V V + E+++VSWN++I
Sbjct: 556 PSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSII 615
Query: 384 SAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HG 441
+A +G + L L +EM +K G D +T ++S+ ++ + D G + + +G
Sbjct: 616 AACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYG 675
Query: 442 IHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
I + E Y ++D++ ++G + A + K+ D W ++ + +E A V
Sbjct: 676 IQPQ-QEHYACVVDLFGRAGRLTEAYETV-KSMPFPPDAGVWGTLLGACRLHKNVELAEV 733
Query: 500 AFRQMLE 506
A ++++
Sbjct: 734 ASSKLMD 740
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 3/229 (1%)
Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
++ LL A SN GKQ HA+L+ + I + + ++ MYA G ++F + D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
WN++I+ + +NGLL +A + +ML V+P+V T ++ AC + N + G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-G 156
Query: 533 KQLHGFSIRYL-LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
++ L +D N FV +SLI Y + G I+ + +F ++ +K+ V + M+ GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 592 HGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
G + + F M+ I P+A+TF VLS C+ L+D G+Q+ L+
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 237/719 (32%), Positives = 390/719 (54%), Gaps = 53/719 (7%)
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
D+ T+SS+LK+C R+ R+GK VH I P +YNSL+++YS S AE
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAE--- 117
Query: 166 LKYVEVDYSKYDLVCKVFDTMRR---RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
VF+TMRR R+VV+W+ +++ Y R ++A++ F L +G+
Sbjct: 118 ---------------DVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 223 RPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE-LGCFDF 281
P+ + V A S+ V G L+K G + +D+ V S I M+ + F+
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG-HFESDVCVGCSLIDMFVKGENSFEN 221
Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
A K+FD E N W MI +Q P EAI F+ ++ L D T S SA +
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACA 280
Query: 342 QLQELDLGQQLHAYIIKNFVALPV---------------------IVLNAVIERDVVSWN 380
+L+ L LG+QLH++ I++ + V V + + + V+SW
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 381 TMISAFVQN-GLDDEGLMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
+I+ +++N L E + L EM QG + + T ++ A NL + VGKQ
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 439 RHGIHF-EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
+ G+ + + +I M+ KS ++ A++ FE +++ ++N + G +N E+A
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFES--LSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
F ++ E + + T AS+L +G+I G+Q+H ++ L N V +LI M
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
YSK G I+ A+ VF + +N +++T+MI G+ +HG + R L F M G++P+ +T+
Sbjct: 519 YSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTY 578
Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
VA+LSACS+ GLV EG + F+ M +++KI+P EHY C+ D+L R G + +A+EF+ +
Sbjct: 579 VAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP 638
Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
+ +VL +W + LG+CR+H ++EL ++ A+K+LE+D P ++ LSNIYA G WE
Sbjct: 639 FQADVL-VWRTFLGACRVHSNTELGKLAARKILELDPNE--PAAYIQLSNIYACAGKWEE 695
Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
++R++M+ER L KE GCSWI+VG +++F D HP +H+IY+ L+RL E++ G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCG 754
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 51/480 (10%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A ++FD ++ V W +I + P EAI + M S + D +T SSV AC
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES--DKFTLSSVFSAC 279
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
AE NL +GK +H IR S V SL++MY+ C S D + D
Sbjct: 280 AELENLSLGKQLHSWAIR--SGLVDDVECSLVDMYAKC--SADGSV-------------D 322
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKT-ERYVEAVRQFRMMLRMG-IRPSTISFVNVFPA 235
KVFD M +V++W +++ Y+K EA+ F M+ G + P+ +F + F A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
+L D + V G K G ++ VA+S I M+ + + A++ F++ E+N
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRG--LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
+NT + G +N + +A +L ++ E E+ TF S LS V+ + + G+Q+H+
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
++K ++ V NA+I R+V+SW +MI+ F ++G
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG-KQTHAYLLRHGIHFEGMESY--LI 452
L +M ++G + VT A+LSA S++ G + ++ H I ME Y ++
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK-PKMEHYACMV 618
Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
D+ ++GL+ A + F D W + + E +A R++LE + PN
Sbjct: 619 DLLCRAGLLTDAFE-FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPN 675
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
+DSVT ++LL + R+ +GK HA L+ I + + + LI +Y+KSG A +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 468 FEK-NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM 526
FE G RD +W+AM+A Y NG +A F + LE + PN +V+ AC+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 527 GNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKS-GVINYAANVFAKIPEKNSVTYTT 584
+ +G+ GF ++ + +V VG SLIDM+ K A VF K+ E N VT+T
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
MI Q G A+ F M G E D T +V SAC+
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 150/299 (50%), Gaps = 25/299 (8%)
Query: 47 SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSC 105
+K +G R++FD + + + W +I G++ N NL EAI L+S+M + +
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM-ITQGHVEP 371
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCH-FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
+++T+SS KAC + R+GK V F R ++ S V NS+++M+ DA+
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS-VANSVISMFVKSDRMEDAQ-- 428
Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
+ F+++ +N+V++NT + + + +A + + +
Sbjct: 429 ----------------RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 225 STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARK 284
S +F ++ ++++G + + ++ +VKLG V ++ I MY++ G D A +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP--VCNALISMYSKCGSIDTASR 530
Query: 285 IFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
+F+ RN W +MI G+ ++ + +E F Q++E + + ++VT+++ LSA S +
Sbjct: 531 VFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE-EGVKPNEVTYVAILSACSHV 588
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 22/198 (11%)
Query: 44 SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYE-AILLYSQMKKSSPY 102
S +S + R A++ F+S++ V +NT + G C NL +E A L S++ +
Sbjct: 413 SVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG-TCRNLNFEQAFKLLSEITERELG 471
Query: 103 TSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE 162
S +T++S+L A ++R G+ +H ++ + ++ V N+L++MYS C S
Sbjct: 472 VSA--FTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS----- 524
Query: 163 MVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI 222
D +VF+ M RNV++W ++++ + K + + F M+ G+
Sbjct: 525 -------------IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 223 RPSTISFVNVFPALSSLG 240
+P+ +++V + A S +G
Sbjct: 572 KPNEVTYVAILSACSHVG 589
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/738 (32%), Positives = 373/738 (50%), Gaps = 88/738 (11%)
Query: 73 WNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCH 132
WN++I + N + + L+ M S +T DNYT+ V KAC E ++R G++ H
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLS-WTP-DNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 133 FIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV 192
+ + FV N+L+ MYS C S DA KVFD M +VV
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRSLSDAR------------------KVFDEMSVWDVV 194
Query: 193 AWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
+WN+I+ Y K + A+ F RM G RP I+ VNV P +SLG + ++
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
V SE + ++FV + + MYA+ G D A +F N ++ WN M+ GY Q
Sbjct: 255 AVT--SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
+A+ LF ++QE
Sbjct: 313 DAVRLF-----------------------EKMQE------------------------EK 325
Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
I+ DVV+W+ IS + Q GL E L + +M G + VT+ ++LS +++ GK
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 432 QTHAYLLRHGIHF----EGMESY----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNA 483
+ H Y +++ I G E+ LIDMYAK + TAR +F+ +RD TW
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 484 MIAGYTQNGLLEEAFVAFRQMLEHNVT--PNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
MI GY+Q+G +A +M E + PN TI+ L AC + + +GKQ+H +++R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 542 YLLDQN---VFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
QN +FV LIDMY+K G I+ A VF + KN VT+T+++ GYG HG E A
Sbjct: 506 N--QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
L +F M+ G + D +T + VL ACS++G++D+G++ F+ M+ + + P EHY C+ D
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
+LGR G++ A ++E+ E + +W + L CR+HG EL E A+K+ E+ + +
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHD- 681
Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
G + LLSN+YA G W++V ++R MR +G++K GCSW++ F D+ HP +
Sbjct: 682 -GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740
Query: 779 HKIYEMLERLAMEMRNAG 796
+IY++L +++ G
Sbjct: 741 KEIYQVLLDHMQRIKDIG 758
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 223/466 (47%), Gaps = 59/466 (12%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC--DNYTYSSVLK 115
AR++FD ++ V WN+II + P A+ ++S+M C DN T +VL
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE---FGCRPDNITLVNVLP 237
Query: 116 ACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC---------LSSLDA-EMVG 165
CA +GK +HC + + FV N L++MY+ C S++ ++V
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 166 LKYVEVDYS---KYDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
+ YS +++ ++F+ M+ + +VV W+ +S Y + EA+ R ML
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKL-----GSEYVNDLFVASSAIFMY 273
GI+P+ ++ ++V +S+G ++ +K + + ++ V + I MY
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 274 AELGCFDFARKIFDNC--LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD-EIVFDD 330
A+ D AR +FD+ ER+ W MIGGY Q+ +A+EL ++ E D + +
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFV-ALPVIVLNAVIE---------------- 373
T AL A + L L +G+Q+HAY ++N A+P+ V N +I+
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 374 ----RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDV 429
++ V+W ++++ + +G +E L + EM++ GF +D VT+ +L A S+ D
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 430 GKQTHAYLLRHGIHF---EGMESY--LIDMYAKSGLIKTARQIFEK 470
G + Y R F G E Y L+D+ ++G + A ++ E+
Sbjct: 598 GME---YFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640
Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 173/386 (44%), Gaps = 49/386 (12%)
Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
V WN++I ++ NG ++ L L M + D+ T + A + + G+ HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 436 YLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
L G I + + L+ MY++ + AR++F++ D +WN++I Y + G
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV--WDVVSWNSIIESYAKLGKP 209
Query: 495 EEAFVAFRQML-EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
+ A F +M E P+ +T+ +VLP C +G LGKQLH F++ + QN+FVG
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF----------- 602
L+DMY+K G+++ A VF+ + K+ V++ M+ GY Q G E A+ LF
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 603 ------------------------RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI-- 636
R M GI+P+ +T ++VLS C+ G + G +I
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 637 ------FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
DL + + + + + DM + KV A L + + W ++
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRN 716
G HG + A + ++ E D +
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQT 473
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 136/322 (42%), Gaps = 5/322 (1%)
Query: 431 KQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
K H LL GI + S+LI Y G + A + + D WN++I Y
Sbjct: 45 KLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104
Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
NG + F M + TP+ T V AC + ++ G+ H S+ NVFV
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKG-CG 609
G +L+ MYS+ ++ A VF ++ + V++ ++I Y + G + AL +F M G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 610 IEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEA 669
PD IT V VL C+ G G Q+ IQ C V DM + G + EA
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV-DMYAKCGMMDEA 283
Query: 670 YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
+ + V W +++ G E A + +K+ E + + + +S Y
Sbjct: 284 NTVFSNMSVKDVV--SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG-Y 340
Query: 730 AEEGNWENVDKVRKEMRERGLR 751
A+ G V ++M G++
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIK 362
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 176/457 (38%), Gaps = 53/457 (11%)
Query: 51 QEGRPHLARQLFDSI----TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCD 106
Q GR A +LF+ + + V W+ I G+ L YEA+ + QM S +
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG--IKPN 364
Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRC-------FSNPSRFVYNSLLNMYSTCLSSL 159
T SVL CA L GK +HC+ I+ V N L++MY+ C
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC---- 420
Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTM--RRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
K D +FD++ + R+VV W ++ Y + +A+ M
Sbjct: 421 --------------KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 218 LR--MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
RP+ + A +SL + ++ ++ V LFV++ I MYA+
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV-PLFVSNCLIDMYAK 525
Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
G AR +FDN + +N W +++ GY + + EA+ +F ++ + D VT L
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLV 584
Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
L A S +D G + + F P + ++ + G +
Sbjct: 585 VLYACSHSGMIDQGMEYFNRMKTVFGVSP----------GPEHYACLVDLLGRAGRLNAA 634
Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMY 455
L L+ EM + V A LS ++G+ + + +G + L ++Y
Sbjct: 635 LRLIEEMPMEP---PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 456 AKSGLIKTA---RQIFEKNDSGDRDQATWNAMIAGYT 489
A +G K R + R +W I G T
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT 728
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 371/639 (58%), Gaps = 35/639 (5%)
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
++F M +R++ WNT++ + +++ E + F M R +P + A L
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 241 DYKSADVVYGLL---VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
+ ++++G + V LGS DL+V SS I+MY + G A ++FD + + W
Sbjct: 75 EVNYGEMIHGFVKKDVTLGS----DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
++M+ G+ +N P +A+E F +++ ++ D VT ++ +SA ++L LG+ +H ++I
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 358 KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
+ + + ++N+++ E+DV+SW+T+I+ +VQNG E L+
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
+ +M G + TV +L A + + + G++TH +R G+ E + + L+DMY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML-EHNVTPNVVT 515
K + A +F + +D +W A+I+G+T NG+ + F ML E+N P+ +
Sbjct: 311 KCFSPEEAYAVFSRIPR--KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 516 IASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
+ VL +C+ +G +E K H + I+Y D N F+G SL+++YS+ G + A+ VF I
Sbjct: 369 MVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 576 EKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITFVAVLSACSYAGLVDEGL 634
K++V +T++I GYG HG +AL F M K ++P+ +TF+++LSACS+AGL+ EGL
Sbjct: 429 LKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGL 488
Query: 635 QIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
+IF LM +Y++ P+ EHY + D+LGRVG + A E K + +I G+LLG+CR
Sbjct: 489 RIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM-PFSPTPQILGTLLGACR 547
Query: 695 LHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEV 754
+H + E+AE VAKKL E+++ ++ GY++L+SN+Y +G WENV+K+R +++RG++K +
Sbjct: 548 IHQNGEMAETVAKKLFELESNHA--GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 755 GCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
S I++ V+RF + D+ HP+ +Y +L+ L + M+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 214/440 (48%), Gaps = 30/440 (6%)
Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
AR++F +R+ WNT++ + E + F + DE D+ T AL A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACG 71
Query: 342 QLQELDLGQQLHAYIIKN-------FVALPVI--------------VLNAVIERDVVSWN 380
+L+E++ G+ +H ++ K+ +V +I + + + + D+V+W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 381 TMISAFVQNGLDDEGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
+M+S F +NG + + M D VT+ L+SA + L N +G+ H +++R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 440 HGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
G + + + L++ YAKS K A +F+ ++D +W+ +IA Y QNG EA
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKM--IAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
+ F M++ PNV T+ VL AC ++E G++ H +IR L+ V V T+L+DMY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSM-KGCGIEPDAITF 617
K A VF++IP K+ V++ +I G+ +GM+ R++ F M PDAI
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
V VL +CS G +++ + F +Y + + ++ R G + A + +
Sbjct: 370 VKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIA 428
Query: 678 EEGNVLEIWGSLLGSCRLHG 697
+ V +W SL+ +HG
Sbjct: 429 LKDTV--VWTSLITGYGIHG 446
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/550 (24%), Positives = 258/550 (46%), Gaps = 63/550 (11%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
ARQ+F +T+ + WNT++ E + +S M + DN+T LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKP--DNFTLPVALKAC 70
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSR-FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
E R + G+ +H + + S +V +SL+ MY C ++A
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEA--------------- 115
Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPA 235
++FD + + ++V W+++VS + K +AV F RM++ + P ++ + + A
Sbjct: 116 ---LRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA 172
Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
+ L + + V+G +++ G + NDL + +S + YA+ F A +F E++
Sbjct: 173 CTKLSNSRLGRCVHGFVIRRG--FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230
Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
W+T+I YVQN EA+ +F +++ D + T L L A + +L+ G++ H
Sbjct: 231 SWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289
Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL---- 391
I+ + V V A+++ +DVVSW +IS F NG+
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRS 349
Query: 392 -DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGM 447
++ +ML+ + D++ + +L + S L + K H+Y++++G F G
Sbjct: 350 IEEFSIMLLENNTRP----DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG- 404
Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
+ L+++Y++ G + A ++F N +D W ++I GY +G +A F M++
Sbjct: 405 -ASLVELYSRCGSLGNASKVF--NGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS 461
Query: 508 N-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIR-YLLDQNVFVGTSLIDMYSKSGVIN 565
+ V PN VT S+L AC+ G I G ++ + Y L N+ L+D+ + G ++
Sbjct: 462 SEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLD 521
Query: 566 YAANVFAKIP 575
A + ++P
Sbjct: 522 TAIEITKRMP 531
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 203/455 (44%), Gaps = 72/455 (15%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
GR A ++FD + +P V W++++ GF N PY+A+ + +M +S T D T +
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP-DRVTLIT 168
Query: 113 VLKACAETRNLRIGKAVHCHFI-RCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
++ AC + N R+G+ VH I R FSN V NSLLN Y+ + +A
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV-NSLLNCYAKSRAFKEA---------- 217
Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
+F + ++V++W+T+++ YV+ EA+ F M+ G P+ + +
Sbjct: 218 --------VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLC 269
Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF--DFARKIFDNC 289
V A ++ D + + L ++ G E ++ V+++ + MY + CF + A +F
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLE--TEVKVSTALVDMY--MKCFSPEEAYAVFSRI 325
Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
++ W +I G+ N +IE F +L + D + + L + S+L L+
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 350 QQLHAYIIK-NFVALPVI-------------------VLNAVIERDVVSWNTMISAFVQN 389
+ H+Y+IK F + P I V N + +D V W ++I+ + +
Sbjct: 386 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 390 GLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF---- 444
G + L M K + + VT ++LSA S HA L+ G+
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGLRIFKLM 494
Query: 445 -------EGMESY--LIDMYAKSGLIKTARQIFEK 470
+E Y L+D+ + G + TA +I ++
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 529
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 241/746 (32%), Positives = 391/746 (52%), Gaps = 50/746 (6%)
Query: 72 IWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHC 131
+WN+II F N L EA+ Y ++++S S D YT+ SV+KACA + +G V+
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESK--VSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 132 HFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNV 191
+ FV N+L++MYS +GL +VFD M R++
Sbjct: 131 QILDMGFESDLFVGNALVDMYSR---------MGL---------LTRARQVFDEMPVRDL 172
Query: 192 VAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGL 251
V+WN+++S Y Y EA+ + + I P + + +V PA +L K ++G
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
+K S + + V + + MY + AR++FD R++ +NTMI GY++
Sbjct: 233 ALK--SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
E++ +F++ LD+ D +T S L A L++L L + ++ Y++K L V N +
Sbjct: 291 ESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 372 IE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
I+ +D VSWN++IS ++Q+G E + L M D
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEK 470
+T L+S ++ L + GK H+ ++ GI + + + LIDMYAK G + + +IF
Sbjct: 409 ITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSS 468
Query: 471 NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIE 530
+GD TWN +I+ + G QM + V P++ T LP C +
Sbjct: 469 MGTGD--TVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 526
Query: 531 LGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYG 590
LGK++H +R+ + + +G +LI+MYSK G + ++ VF ++ ++ VT+T MI YG
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 586
Query: 591 QHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPST 650
+G E+AL F M+ GI PD++ F+A++ ACS++GLVDEGL F+ M+ YKI P
Sbjct: 587 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 646
Query: 651 EHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLL 710
EHY CV D+L R K+ +A EF++ + + + IW S+L +CR G E AE V+++++
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDA-SIWASVLRACRTSGDMETAERVSRRII 705
Query: 711 EMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFAS 770
E++ + PGY +L SN YA W+ V +RK ++++ + K G SWI+VG V+ F+S
Sbjct: 706 ELNPDD--PGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763
Query: 771 KDQEHPQSHKIYEMLERLAMEMRNAG 796
D PQS IY+ LE L M G
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEG 789
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 289/595 (48%), Gaps = 52/595 (8%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
ARQ+FD + V WN++I G+ + EA+ +Y ++K S + D++T SSVL A
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS--WIVPDSFTVSSVLPAF 217
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
++ G+ +H ++ N V N L+ MY DA
Sbjct: 218 GNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR--------------- 262
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
+VFD M R+ V++NT++ Y+K E E+VR F L +P ++ +V A
Sbjct: 263 ---RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACG 318
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
L D A +Y ++K G +V + V + I +YA+ G AR +F++ ++T W
Sbjct: 319 HLRDLSLAKYIYNYMLKAG--FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSW 376
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
N++I GY+Q+ +EA++LF ++ ++E D +T+L +S ++L +L G+ LH+ I
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQA-DHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 358 KNFVALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLM 397
K+ + + + V NA+I+ D V+WNT+ISA V+ G GL
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYA 456
+ +M+K + D T L ++L + +GK+ H LLR G E + + LI+MY+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
K G ++ + ++FE+ RD TW MI Y G E+A F M + + P+ V
Sbjct: 556 KCGCLENSSRVFERMSR--RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 517 ASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
+++ AC+ G ++ G Y +D + ++D+ S+S I+ A +P
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 576 EK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
K ++ + +++ G E A + R + + PD + ++L++ +YA L
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRI--IELNPDDPGY-SILASNAYAAL 725
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 235/458 (51%), Gaps = 27/458 (5%)
Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
+NV WN+I+ + K + EA+ + + + P +F +V A + L D + D+V
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
Y ++ +G E +DLFV ++ + MY+ +G AR++FD R+ WN++I GY +
Sbjct: 129 YEQILDMGFE--SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK---------- 358
+ EA+E++ + L+ IV D T S L A L + GQ LH + +K
Sbjct: 187 YYEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 359 -NFVALPVI---------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
VA+ + V + + RD VS+NTMI +++ + +E + + E Q F
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FK 304
Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQI 467
D +TV+++L A +LR+ + K + Y+L+ G E + + LID+YAK G + TAR +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMG 527
F N +D +WN++I+GY Q+G L EA F+ M+ + +T ++ +
Sbjct: 365 F--NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
+++ GK LH I+ + ++ V +LIDMY+K G + + +F+ + ++VT+ T+I
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
+ G L + M+ + PD TF+ L C+
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 227/478 (47%), Gaps = 49/478 (10%)
Query: 54 RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY-SQMKKSSPYTSCDNYTYSS 112
RP AR++FD + +V +NT+I G++ + E++ ++ + + P D T SS
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKP----DLLTVSS 312
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
VL+AC R+L + K ++ + ++ V N L+++Y+ C +M+ +
Sbjct: 313 VLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC-----GDMITAR----- 362
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
VF++M ++ V+WN+I+S Y+++ +EA++ F+MM+ M + I+++ +
Sbjct: 363 --------DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
+ L D K ++ +K G DL V+++ I MYA+ G + KIF +
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSG--ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+T WNT+I V+ +++ Q + E+V D TFL L + L LG+++
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQ-MRKSEVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 353 HAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLD 392
H +++ + + NA+IE RDVV+W MI A+ G
Sbjct: 532 HCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEG 591
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY-- 450
++ L +M+K G + DSV A++ A S+ D G + H +E Y
Sbjct: 592 EKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYAC 651
Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
++D+ ++S I A + F + D + W +++ +G +E A R+++E N
Sbjct: 652 VVDLLSRSQKISKAEE-FIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELN 708
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 522 ACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI-PEKNSV 580
A + N+ +++H I LD + F LID YS + +VF ++ P KN
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLM 640
+ ++I + ++G+ AL + ++ + PD TF +V+ AC AGL D ++ DL+
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDA--EMGDLV 128
Query: 641 -QQEYKIQPSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHG 697
+Q + ++ + + DM R+G + A + E+ L W SL+ HG
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRD--LVSWNSLISGYSSHG 186
Query: 698 HSELA 702
+ E A
Sbjct: 187 YYEEA 191
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 362/638 (56%), Gaps = 34/638 (5%)
Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR-MGIRPSTISFVNVFPALSSLG 240
+F +++R +V +N ++ + E ++ F + + ++P++ ++ A S
Sbjct: 74 IFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFR 133
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
D ++ V++G V G + ++L + S+ + MY + + ARK+FD E++T +WNTM
Sbjct: 134 DDRAGRVIHGQAVVDGCD--SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA------ 354
I GY +N VE+I++F ++ D T L L AV++LQEL LG Q+H+
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTG 251
Query: 355 -----YIIKNFVAL----PVIVLNAVIER-----DVVSWNTMISAFVQNGLDDEGLMLVY 400
Y++ F++L I + + + R D+V++N MI + NG + L L
Sbjct: 252 CYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFK 311
Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSG 459
E+ G + S T+ +L+ + +L + H Y L+ + + + L +Y+K
Sbjct: 312 ELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLN 368
Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
I++AR++F ++S ++ +WNAMI+GYTQNGL E+A FR+M + +PN VTI +
Sbjct: 369 EIESARKLF--DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCI 426
Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
L AC +G + LGK +H + +++V T+LI MY+K G I A +F + +KN
Sbjct: 427 LSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNE 486
Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
VT+ TMI GYG HG + AL++F M GI P +TF+ VL ACS+AGLV EG +IF+
Sbjct: 487 VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNS 546
Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG-EEGNVLEIWGSLLGSCRLHGH 698
M Y +PS +HY C+ D+LGR G + A +F++ + E G+ +W +LLG+CR+H
Sbjct: 547 MIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGS--SVWETLLGACRIHKD 604
Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
+ LA V++KL E+D N GYHVLLSNI++ + N+ VR+ ++R L K G +
Sbjct: 605 TNLARTVSEKLFELDPDN--VGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662
Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
I++G + F S DQ HPQ +IYE LE+L +MR AG
Sbjct: 663 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Score = 202 bits (514), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 163/609 (26%), Positives = 292/609 (47%), Gaps = 61/609 (10%)
Query: 44 SRLSKICQE----GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
S L+K+ Q G + AR +F S+ RP ++N ++ GF N P+ ++ +++ ++KS
Sbjct: 53 SLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKS 112
Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
+ ++ TY+ + A + R+ R G+ +H + + + ++++ MY
Sbjct: 113 TDLKP-NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMY------- 164
Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
K+ V+ ++ KVFD M ++ + WNT++S Y K E YVE+++ FR ++
Sbjct: 165 ------FKFWRVEDAR-----KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLIN 213
Query: 220 MG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
R T + +++ PA++ L + + ++ L K G Y +D +V + I +Y++ G
Sbjct: 214 ESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC-YSHD-YVLTGFISLYSKCGK 271
Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
+F + + +N MI GY N ++ LF +++ L T +S +
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSLVP 330
Query: 339 AVSQLQELDLGQQLHAYIIK-NFV-------ALPVI------------VLNAVIERDVVS 378
L L +H Y +K NF+ AL + + + E+ + S
Sbjct: 331 VSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 379 WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL 438
WN MIS + QNGL ++ + L EMQK F + VT+T +LSA + L +GK H L
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD--L 445
Query: 439 RHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
FE + + LI MYAK G I AR++F+ +++ TWN MI+GY +G +
Sbjct: 446 VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTK--KNEVTWNTMISGYGLHGQGQ 503
Query: 496 EAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI-RYLLDQNVFVGTSL 554
EA F +ML +TP VT VL AC+ G ++ G ++ I RY + +V +
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 555 IDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
+D+ ++G + A + E S + T++ H + A ++ S K ++PD
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV--SEKLFELDPD 621
Query: 614 AITFVAVLS 622
+ + +LS
Sbjct: 622 NVGYHVLLS 630
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/772 (31%), Positives = 400/772 (51%), Gaps = 55/772 (7%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G P +R +FD++ WN +I + N L E + + +M ++ D++TY
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP-DHFTYPC 192
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
V+KACA ++ IG AVH ++ FV N+L++ Y T DA
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDA----------- 241
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM----GIRPSTIS 228
++FD M RN+V+WN+++ + E+ M+ P +
Sbjct: 242 -------LQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVAT 294
Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
V V P + + V+G VKL + +L + ++ + MY++ GC A+ IF
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLD--KELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIV-FDDVTFLSALSAVSQLQELD 347
+N WNTM+GG+ ++ Q+L E V D+VT L+A+ L
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLP 412
Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
++LH Y +K +V NA + + V SWN +I
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
Q+ L +M+ G + DS TV +LLSA S L++ +GK+ H +++R+ + + +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD-L 531
Query: 448 ESYL--IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
YL + +Y G + T + +F+ + D+ +WN +I GY QNG + A FRQM+
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAME--DKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
+ + +++ V AC+ + ++ LG++ H +++++LL+ + F+ SLIDMY+K+G I
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 649
Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
++ VF + EK++ ++ MI+GYG HG+++ A+ LF M+ G PD +TF+ VL+AC+
Sbjct: 650 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 709
Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV-KELGEEGNVLE 684
++GL+ EGL+ D M+ + ++P+ +HY CV DMLGR G++ +A V +E+ EE +V
Sbjct: 710 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV-G 768
Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
IW SLL SCR+H + E+ E VA KL E++ P +VLLSN+YA G WE+V KVR+
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK--PENYVLLSNLYAGLGKWEDVRKVRQR 826
Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
M E LRK+ GCSWI++ V F ++ +I + L M++ G
Sbjct: 827 MNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 196/401 (48%), Gaps = 29/401 (7%)
Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
LV + ND + + I MYA G D +R +FD +N WN +I Y +N
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168
Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
E +E F++++ +++ D T+ + A + + ++ +G +H ++K + V V NA+
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228
Query: 372 I--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ----GF 407
+ ER++VSWN+MI F NG +E +L+ EM ++ F
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQ 466
M D T+ +L + R +GK H + ++ + E + + L+DMY+K G I A+
Sbjct: 289 MPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQM 348
Query: 467 IFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE--HNVTPNVVTIASVLPACN 524
IF+ N+ +++ +WN M+ G++ G F RQML +V + VTI + +P C
Sbjct: 349 IFKMNN--NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
+ K+LH +S++ N V + + Y+K G ++YA VF I K ++
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
+I G+ Q +L MK G+ PD+ T ++LSACS
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 225/638 (35%), Positives = 352/638 (55%), Gaps = 39/638 (6%)
Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM-MLRMGIRPSTISFVNVFPALSSLGD 241
FD ++ R+V AWN ++S Y + E +R F + ML G+ P +F +V A ++ D
Sbjct: 109 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 168
Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
+ ++ L +K G ++ D++VA+S I +Y+ AR +FD R+ WN MI
Sbjct: 169 ---GNKIHCLALKFG--FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
GY Q+ + EA+ L + +D VT +S LSA ++ + + G +H+Y IK+ +
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAMDS-----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 362 ALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVYE 401
+ V N +I+ RD++SWN++I A+ N + L E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMYAKSG 459
M+ D +T+ +L S S L + + + LR G E + + ++ MYAK G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIAS 518
L+ +AR +F N + D +WN +I+GY QNG EA + M E + N T S
Sbjct: 399 LVDSARAVF--NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
VLPAC+ G + G +LHG ++ L +VFV TSL DMY K G + A ++F +IP N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFD 638
SV + T+I +G HG E+A+ LF+ M G++PD ITFV +LSACS++GLVDEG F+
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 639 LMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGH 698
+MQ +Y I PS +HY C+ DM GR G++ A +F+K + + + IWG+LL +CR+HG+
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA-SIWGALLSACRVHGN 635
Query: 699 SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSW 758
+L ++ ++ L E++ + GYHVLLSN+YA G WE VD++R +GLRK G S
Sbjct: 636 VDLGKIASEHLFEVEPEH--VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSS 693
Query: 759 IDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
++V V F + +Q HP ++Y L L +++ G
Sbjct: 694 MEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIG 731
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 178/674 (26%), Positives = 301/674 (44%), Gaps = 112/674 (16%)
Query: 36 KLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYS 94
+++ I ++L + C G LAR FD I WN +I G+ E I +S
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141
Query: 95 QMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYST 154
SS T D T+ SVLKAC R + G +HC ++ +V SL+++YS
Sbjct: 142 LFMLSSGLTP-DYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYS- 196
Query: 155 CLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF 214
+Y V ++ +FD M R++ +WN ++S Y ++ EA
Sbjct: 197 ------------RYKAVGNARI-----LFDEMPVRDMGSWNAMISGYCQSGNAKEA---- 235
Query: 215 RMMLRMGIRP-STISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
+ L G+R +++ V++ A + GD+ ++ +K G E ++LFV++ I +Y
Sbjct: 236 -LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE--SELFVSNKLIDLY 292
Query: 274 AELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
AE G +K+FD R+ WN++I Y N P+ AI LF Q + L I D +T
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF-QEMRLSRIQPDCLTL 351
Query: 334 LSALSAVSQLQELDLGQQLHAYII-KNFVALPVIVLNAVI-------------------- 372
+S S +SQL ++ + + + + K + + + NAV+
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG-FMIDSVTVTALLSAASNLRNQDVGK 431
DV+SWNT+IS + QNG E + + M+++G + T ++L A S G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 432 QTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
+ H LL++G++ + + + L DMY K G ++ A +F + + WN +IA +
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR--VNSVPWNTLIACHGF 529
Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
+G E+A + F++ML+ V P+ +T ++L AC
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC--------------------------- 562
Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVT-----YTTMILGYGQHGMSERALSLFRSM 605
S SG+++ F + +T Y M+ YG+ G E AL +SM
Sbjct: 563 --------SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 606 KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH---YCCVADMLGR 662
++PDA + A+LSAC G VD G + E+ + EH + +++M
Sbjct: 615 S---LQPDASIWGALLSACRVHGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 663 VGKVVEAYEFVKEL 676
GK +E V E+
Sbjct: 667 AGK----WEGVDEI 676
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 260/520 (50%), Gaps = 37/520 (7%)
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
+ +SA ++ LV S+ + ++ +++ + +Y LG AR FD+ R+ WN M
Sbjct: 66 NLQSAKCLHARLVV--SKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE--------LDLGQQL 352
I GY + + E I F + + D TF S L A + + L G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW 183
Query: 353 HAYIIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
Y+ + + L I+ + + RD+ SWN MIS + Q+G E L L ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
+DSVTV +LLSA + + + G H+Y ++HG+ E + + LID+YA+ G ++
Sbjct: 244 A----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLR 299
Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
+++F++ RD +WN++I Y N A F++M + P+ +T+ S+
Sbjct: 300 DCQKVFDRMYV--RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASI 357
Query: 523 CNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSV 580
+ +G+I + + GF++R + L +++ +G +++ MY+K G+++ A VF +P + +
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFL-EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 581 TYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
++ T+I GY Q+G + A+ ++ M+ G I + T+V+VL ACS AG + +G+++
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
+ + + +ADM G+ G++ +A ++ +V W +L+ HGH
Sbjct: 477 LLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV--PWNTLIACHGFHGHG 533
Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNI----YAEEGNW 735
E A ++ K++L+ + + LLS +EG W
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 196/435 (45%), Gaps = 39/435 (8%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
GR +++FD + + WN+II + N P AI L+ +M+ S C T S
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC--LTLIS 353
Query: 113 VLKACAETRNLRIGKAVHCHFIR-CFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
+ ++ ++R ++V +R + + N+++ MY+ +GL V
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK---------LGL----V 400
Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFV 230
D ++ VF+ + +V++WNTI+S Y + EA+ + +M G I + ++V
Sbjct: 401 DSAR-----AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
+V PA S G + ++G L+K G Y+ D+FV +S MY + G + A +F
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGL-YL-DVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
N+ WNT+I + + H +A+ LF ++L+ + + D +TF++ LSA S +D GQ
Sbjct: 514 RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD-EGVKPDHITFVTLLSACSHSGLVDEGQ 572
Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
+ ++ P + + M+ + + G + L + M Q D
Sbjct: 573 WCFEMMQTDYGITP----------SLKHYGCMVDMYGRAGQLETALKFIKSMSLQP---D 619
Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFE- 469
+ ALLSA N D+GK +L G L +MYA +G + +I
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 470 KNDSGDRDQATWNAM 484
+ G R W++M
Sbjct: 680 AHGKGLRKTPGWSSM 694
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 240/766 (31%), Positives = 391/766 (51%), Gaps = 55/766 (7%)
Query: 54 RPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSV 113
R + A LFD + +++ GF + EA L+ + + C +SSV
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS--IFSSV 99
Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
LK A + G+ +HC I+ L+ S S +D M G
Sbjct: 100 LKVSATLCDELFGRQLHCQCIKF----------GFLDDVSVGTSLVDTYMKG-------- 141
Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF 233
S + KVFD M+ RNVV W T++S Y + E + F M G +P++ +F
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
Query: 234 PALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
L+ G V+ ++VK G + + V++S I +Y + G AR +FD ++
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLD--KTIPVSNSLINLYLKCGNVRKARILFDKTEVKS 259
Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
WN+MI GY N +EA+ +F + L+ + + +F S + + L+EL +QLH
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYS-MRLNYVRLSESSFASVIKLCANLKELRFTEQLH 318
Query: 354 AYIIK-NFV-------ALPVIVLNAVIERD-------------VVSWNTMISAFVQNGLD 392
++K F+ AL V D VVSW MIS F+QN
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYL 451
+E + L EM+++G + T + +L+A + +V HA +++ + + L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTAL 434
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
+D Y K G ++ A ++F D D+D W+AM+AGY Q G E A F ++ + + P
Sbjct: 435 LDAYVKLGKVEEAAKVFSGID--DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKP 492
Query: 512 NVVTIASVLPACNPM-GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
N T +S+L C ++ GKQ HGF+I+ LD ++ V ++L+ MY+K G I A V
Sbjct: 493 NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV 552
Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
F + EK+ V++ +MI GY QHG + +AL +F+ MK ++ D +TF+ V +AC++AGLV
Sbjct: 553 FKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV 612
Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
+EG + FD+M ++ KI P+ EH C+ D+ R G++ +A + ++ + IW ++L
Sbjct: 613 EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-TIWRTIL 671
Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
+CR+H +EL + A+K++ M +S +VLLSN+YAE G+W+ KVRK M ER +
Sbjct: 672 AACRVHKKTELGRLAAEKIIAMKPEDSAA--YVLLSNMYAESGDWQERAKVRKLMNERNV 729
Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
+KE G SWI+V F + D+ HP +IY LE L+ +++ G
Sbjct: 730 KKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 146/579 (25%), Positives = 258/579 (44%), Gaps = 91/579 (15%)
Query: 26 QIHSLSPPIPKLKT-PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
Q+H++ KT P S ++ + G AR LFD + V WN++I G+ N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 85 LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
L EA+ ++ M+ + Y +++SV+K CA + LR + +HC ++ + +
Sbjct: 275 LDLEALGMFYSMRLN--YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
+L+ YS C + LDA L+ + ++ C NVV+W ++S +++
Sbjct: 333 RTALMVAYSKCTAMLDA----LRLFK------EIGCV-------GNVVSWTAMISGFLQN 375
Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
+ EAV F M R G+RP+ ++ + AL + S V+ +VK + Y
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVK--TNYERSST 429
Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV---- 320
V ++ + Y +LG + A K+F +++ W+ M+ GY Q AI++F ++
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------- 372
++ +E F + + A + S Q G+Q H + IK+ + + V +A++
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQ----GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGN 545
Query: 373 ------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
E+D+VSWN+MIS + Q+G + L + EM+K+ +D VT + +A
Sbjct: 546 IESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAA 605
Query: 421 ASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQAT 480
THA L+ G E Y M + T E N
Sbjct: 606 C-----------THAGLVEEG------EKYFDIMVRDCKIAPTK----EHN--------- 635
Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI-ASVLPACNPMGNIELGKQLHGFS 539
+ M+ Y++ G LE+A +++E+ P TI ++L AC ELG+ L
Sbjct: 636 -SCMVDLYSRAGQLEKAM----KVIENMPNPAGSTIWRTILAACRVHKKTELGR-LAAEK 689
Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
I + ++ L +MY++SG A V + E+N
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 728
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/765 (30%), Positives = 388/765 (50%), Gaps = 51/765 (6%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G+ AR LF ++ P V WN +I G AI + M+KSS ++ T S
Sbjct: 275 GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST--RSTLGS 332
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
VL A NL +G VH I+ + +V +SL++MYS C
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC----------------- 375
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
K + KVF+ + +N V WN ++ Y + + F M G +F ++
Sbjct: 376 -EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
++ D + + +++K + +LFV ++ + MYA+ G + AR+IF+ +R
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIK--KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR 492
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ WNT+IG YVQ+ + EA +LF + + L IV D S L A + + L G+Q+
Sbjct: 493 DNVTWNTIIGSYVQDENESEAFDLF-KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 353 HAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLD 392
H +K + V +++ E VVS N +I+ + QN L+
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE 611
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG--MESY 450
E ++L EM +G +T ++ A + +G Q H + + G EG +
Sbjct: 612 -EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
L+ MY S + A +F + S + W M++G++QNG EEA +++M V
Sbjct: 671 LLGMYMNSRGMTEACALFSELSS-PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
P+ T +VL C+ + ++ G+ +H D + +LIDMY+K G + ++ V
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789
Query: 571 FAKIPEK-NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
F ++ + N V++ ++I GY ++G +E AL +F SM+ I PD ITF+ VL+ACS+AG
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
V +G +IF++M +Y I+ +H C+ D+LGR G + EA +F++ + + +W SL
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDA-RLWSSL 908
Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
LG+CR+HG E+ A+KL+E++ +NS +VLLSNIYA +G WE + +RK MR+RG
Sbjct: 909 LGACRIHGDDIRGEISAEKLIELEPQNSSA--YVLLSNIYASQGCWEKANALRKVMRDRG 966
Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRN 794
++K G SWIDV + FA+ D+ H + KI LE L M++
Sbjct: 967 VKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 171/590 (28%), Positives = 270/590 (45%), Gaps = 87/590 (14%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A + FD + + T WN+++ + P + + + + ++ + + +T+S VL C
Sbjct: 114 AEKQFDFLEKDVTA-WNSMLSMYSSIGKPGKVLRSFVSLFENQIFP--NKFTFSIVLSTC 170
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A N+ G+ +HC I+ + + +L++MY+ C DA
Sbjct: 171 ARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR--------------- 215
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
+VF+ + N V W + S YVK EAV F M G RP ++FV V
Sbjct: 216 ---RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
LG K A +++G E+ D W
Sbjct: 273 RLGKLKDARLLFG------------------------EMSSPDVV-------------AW 295
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
N MI G+ + AIE F + + T S LSA+ + LDLG +HA I
Sbjct: 296 NVMISGHGKRGCETVAIEYFFN-MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 358 KNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLM 397
K +A + V A+ E++ V WN MI + NG + +
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVME 414
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDM 454
L +M+ G+ ID T T+LLS + + ++G Q H+ +++ + F G + L+DM
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVG--NALVDM 472
Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
YAK G ++ ARQIFE+ DRD TWN +I Y Q+ EAF F++M + +
Sbjct: 473 YAKCGALEDARQIFER--MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
+AS L AC + + GKQ+H S++ LD+++ G+SLIDMYSK G+I A VF+ +
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
PE + V+ +I GY Q+ + E A+ LF+ M G+ P ITF ++ AC
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEAC 639
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 248/515 (48%), Gaps = 40/515 (7%)
Query: 123 LRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKV 182
LRIGKAVH + + + N+++++Y+ C +V Y++ K
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKC-------------AQVSYAE-----KQ 117
Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
FD + + +V AWN+++S Y + + +R F + I P+ +F V + +
Sbjct: 118 FDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIG 302
+ ++ ++K+G E + + + + MYA+ AR++F+ ++ NT W +
Sbjct: 177 EFGRQIHCSMIKMGLE--RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVA 362
GYV+ P EA+ +F ++ + D + F++ ++ + LG+ A ++ ++
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRP-DHLAFVTVINTY-----IRLGKLKDARLLFGEMS 288
Query: 363 LPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
P DVV+WN MIS + G + + + M+K T+ ++LSA
Sbjct: 289 SP----------DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 423 NLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
+ N D+G HA ++ G+ + S L+ MY+K ++ A ++FE + +++ W
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE--EKNDVFW 396
Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
NAMI GY NG + F M + T S+L C ++E+G Q H I+
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
L +N+FVG +L+DMY+K G + A +F ++ ++++VT+ T+I Y Q A L
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
F+ M CGI D + L AC++ + +G Q+
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 205/448 (45%), Gaps = 61/448 (13%)
Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
+ ++ + +YA+ +A K FD LE++ WN+M+ Y P + + FV + E +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-N 154
Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALP 364
+I + TF LS ++ ++ G+Q+H +IK + ++
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDA 214
Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
V +++ + V W + S +V+ GL +E +++ M+ +G D + +
Sbjct: 215 RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------- 267
Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
I+ Y + G +K AR +F + S D WN M
Sbjct: 268 ---------------------------INTYIRLGKLKDARLLFGEMSS--PDVVAWNVM 298
Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
I+G+ + G A F M + +V T+ SVL A + N++LG +H +I+ L
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGL 358
Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRS 604
N++VG+SL+ MYSK + AA VF + EKN V + MI GY +G S + + LF
Sbjct: 359 ASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMD 418
Query: 605 MKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVG 664
MK G D TF ++LS C+ + ++ G Q ++ ++ K+ + + DM + G
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCG 477
Query: 665 KVVEAYEFVKELGEEGNVLEIWGSLLGS 692
+ +A + + + + NV W +++GS
Sbjct: 478 ALEDARQIFERMCDRDNV--TWNTIIGS 503
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/735 (31%), Positives = 378/735 (51%), Gaps = 64/735 (8%)
Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
+P+TS T L ++ RNL G+AVH IR ++ N L+N Y+ C
Sbjct: 11 NPHTS----TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC---- 62
Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT---ERYVEAVRQFRM 216
K +F+ + ++VV+WN++++ Y + ++ FR
Sbjct: 63 --------------GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE 108
Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL 276
M I P+ + +F A SSL + L+VK+ S D++V +S + MY +
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSS--FGDIYVDTSLVGMYCKA 166
Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVTFLS 335
G + K+F ERNT W+TM+ GY EAI++F L E +E D F +
Sbjct: 167 GLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTA 226
Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
LS+++ + LG+Q+H IKN + V + NA++ +R+
Sbjct: 227 VLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRN 286
Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHA 435
++W+ M++ + QNG E + L M G T+ +L+A S++ + GKQ H+
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
Query: 436 YLLRHGIHFEG---MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
+LL+ G FE + L+DMYAK+G + AR+ F+ +RD A W ++I+GY QN
Sbjct: 347 FLLKLG--FERHLFATTALVDMYAKAGCLADARKGFDCLQ--ERDVALWTSLISGYVQNS 402
Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
EEA + +R+M + PN T+ASVL AC+ + +ELGKQ+HG +I++ V +G+
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
+L MYSK G + VF + P K+ V++ MI G +G + AL LF M G+EP
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
D +TFV ++SACS+ G V+ G F++M + + P +HY C+ D+L R G++ EA EF
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Query: 673 VKELGEEGNV---LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIY 729
+ E N+ L +W LL +C+ HG EL +KL+ + +R S +V LS IY
Sbjct: 583 I----ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST--YVQLSGIY 636
Query: 730 AEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLA 789
G +V++V K MR G+ KEVGCSWI++ + F D HP + +++ ++
Sbjct: 637 TALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVS 696
Query: 790 MEMRNAGNKTIQNSN 804
+M G T+ +S+
Sbjct: 697 RQMIEEGFVTVLDSS 711
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 243/540 (45%), Gaps = 67/540 (12%)
Query: 26 QIHSLSPPIPKLKTPTIRSRLSKI-CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
Q H+L + + + L + C+ G ++F + T W+T++ G+
Sbjct: 139 QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRG 198
Query: 85 LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
EAI +++ + S +Y +++VL + A T + +G+ +HC I+ +
Sbjct: 199 RVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
N+L+ MYS C S +A CK+FD+ RN + W+ +V+ Y +
Sbjct: 259 SNALVTMYSKCESLNEA------------------CKMFDSSGDRNSITWSAMVTGYSQN 300
Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
+EAV+ F M GI+PS + V V A S + + ++ L+KLG E LF
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE--RHLF 358
Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELD 324
++ + MYA+ GC ARK FD ER+ +W ++I GYVQN+ EA+ L+ + ++
Sbjct: 359 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY-RRMKTA 417
Query: 325 EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV------------------- 365
I+ +D T S L A S L L+LG+Q+H + IK+ L V
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDG 477
Query: 366 -IVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
+V +DVVSWN MIS NG DE L L EM +G D VT ++SA S+
Sbjct: 478 NLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSH- 536
Query: 425 RNQDVGKQTHAYLLRHGIHFEGME------------SYLIDMYAKSGLIKTARQIFEKND 472
++ R +F M + ++D+ +++G +K A++ E +
Sbjct: 537 ---------KGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESAN 587
Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM--LEHNVTPNVVTIASVLPACNPMGNIE 530
D W +++ +G E A ++ L + V ++ + A M ++E
Sbjct: 588 I-DHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVE 646
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/645 (33%), Positives = 353/645 (54%), Gaps = 29/645 (4%)
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
Y D +VF+ + + V ++T++ + K +A++ F M + P +F +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
+ + ++GLLVK G + DLF + MYA+ + ARK+FD ER
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSG--FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ WNT++ GY QN A+E+ + E + + +T +S L AVS L+ + +G+++
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCE-ENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 353 HAYIIKN-FVALPVI-------------------VLNAVIERDVVSWNTMISAFVQNGLD 392
H Y +++ F +L I + + ++ER+VVSWN+MI A+VQN
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
E +++ +M +G V+V L A ++L + + G+ H + G+ + + L
Sbjct: 319 KEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL 378
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
I MY K + TA +F K S R +WNAMI G+ QNG +A F QM V P
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQS--RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP 436
Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
+ T SV+ A + K +HG +R LD+NVFV T+L+DMY+K G I A +F
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
+ E++ T+ MI GYG HG + AL LF M+ I+P+ +TF++V+SACS++GLV+
Sbjct: 497 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE 556
Query: 632 EGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLG 691
GL+ F +M++ Y I+ S +HY + D+LGR G++ EA++F+ ++ + V ++G++LG
Sbjct: 557 AGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV-NVYGAMLG 615
Query: 692 SCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLR 751
+C++H + AE A++L E++ + GYHVLL+NIY WE V +VR M +GLR
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDG--GYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 752 KEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
K GCS +++ V+ F S HP S KIY LE+L ++ AG
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 165/573 (28%), Positives = 284/573 (49%), Gaps = 57/573 (9%)
Query: 46 LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
+S C+ G A ++F+ I V+++T++ GF + +A+ + +M+
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
N+TY +LK C + LR+GK +H ++ + F L NMY+ C +A
Sbjct: 136 YNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR--- 190
Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
KVFD M R++V+WNTIV+ Y + A+ + M ++PS
Sbjct: 191 ---------------KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
I+ V+V PA+S+L ++G ++ G + + + ++++ + MYA+ G + AR++
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN--ISTALVDMYAKCGSLETARQL 293
Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
FD LERN WN+MI YVQN +P EA+ +F ++L+ + + DV+ + AL A + L +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGD 352
Query: 346 LDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISA 385
L+ G+ +H ++ + V V+N++I R +VSWN MI
Sbjct: 353 LERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILG 412
Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
F QNG + L +M+ + D+ T ++++A + L K H ++R +
Sbjct: 413 FAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKN 472
Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
+ + L+DMYAK G I AR IF+ +R TWNAMI GY +G + A F +M
Sbjct: 473 VFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS------LIDMY 558
+ + PN VT SV+ AC+ G +E G L F Y++ +N + S ++D+
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAG--LKCF---YMMKENYSIELSMDHYGAMVDLL 585
Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQ 591
++G +N A + ++P K +V +LG Q
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 240/461 (52%), Gaps = 29/461 (6%)
Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
F + + ++ G D A ++F+ + +++TM+ G+ + + +A++ FV++
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 324 D-EIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVI---------------- 366
D E V + T+L L EL +G+++H ++K+ +L +
Sbjct: 130 DVEPVVYNFTYL--LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVN 187
Query: 367 ----VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
V + + ERD+VSWNT+++ + QNG+ L +V M ++ +T+ ++L A S
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 423 NLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
LR VGK+ H Y +R G + + L+DMYAK G ++TARQ+F+ +R+ +W
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD--GMLERNVVSW 305
Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIR 541
N+MI Y QN +EA + F++ML+ V P V++ L AC +G++E G+ +H S+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 542 YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSL 601
LD+NV V SLI MY K ++ AA++F K+ + V++ MILG+ Q+G AL+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 602 FRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLG 661
F M+ ++PD T+V+V++A + + I ++ + + + + DM
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDKNVFVTTALVDMYA 484
Query: 662 RVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
+ G ++ A + ++ E +V W +++ HG + A
Sbjct: 485 KCGAIMIA-RLIFDMMSERHV-TTWNAMIDGYGTHGFGKAA 523
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Query: 27 IHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
IH LS + + S +S C+ A +F + T V WN +I+GF N
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 86 PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
P +A+ +SQM+ S D +TY SV+ A AE K +H +R + + FV
Sbjct: 419 PIDALNYFSQMR--SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
+L++MY+ C + + A + +FD M R+V WN ++ Y
Sbjct: 477 TALVDMYAKCGAIMIARL------------------IFDMMSERHVTTWNAMIDGYGTHG 518
Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
A+ F M + I+P+ ++F++V A S G
Sbjct: 519 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
A +L C+ + + +Q+ + L Q F T L+ ++ + G ++ AA VF I
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
K +V Y TM+ G+ + ++AL F M+ +EP F +L C + G +I
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 637 FDLMQQEYKIQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCR 694
L+ K S + + +M + +V EA + + E L W +++
Sbjct: 158 HGLL---VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD--LVSWNTIVAGYS 212
Query: 695 LHGHSELAEVVAKKLLEMDTRNS 717
+G + +A + K + E + + S
Sbjct: 213 QNGMARMALEMVKSMCEENLKPS 235
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 233/708 (32%), Positives = 376/708 (53%), Gaps = 49/708 (6%)
Query: 112 SVLKACA-ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
S+L+ C T++LR K VH + + SL+N+Y TC A V
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHV------ 61
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISF 229
+ +D+ R +V WN+++S Y K + + + F+ +L I P + +F
Sbjct: 62 --FENFDI---------RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTF 110
Query: 230 VNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC 289
NV A +LG +++ L+VK G YV D+ VASS + MYA+ F+ + ++FD
Sbjct: 111 PNVIKAYGALGREFLGRMIHTLVVKSG--YVCDVVVASSLVGMYAKFNLFENSLQVFDEM 168
Query: 290 LERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
ER+ WNT+I + Q+ +A+ELF + +E + V+ A+SA S+L L+ G
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGR-MESSGFEPNSVSLTVAISACSRLLWLERG 227
Query: 350 QQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQN 389
+++H +K L V +A+++ + +V+WN+MI +V
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
G + ++ M +G T+T++L A S RN GK H Y++R ++ + +
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
LID+Y K G A +F K +D A +WN MI+ Y G +A + QM+
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQ---KDVAESWNVMISSYISVGNWFKAVEVYDQMVSV 404
Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
V P+VVT SVLPAC+ + +E GKQ+H L+ + + ++L+DMYSK G A
Sbjct: 405 GVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYA 627
+F IP+K+ V++T MI YG HG AL F M+ G++PD +T +AVLSAC +A
Sbjct: 465 FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA 524
Query: 628 GLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWG 687
GL+DEGL+ F M+ +Y I+P EHY C+ D+LGR G+++EAYE +++ E + E+
Sbjct: 525 GLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLS 584
Query: 688 SLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRE 747
+L +C LH L + +A+ L+E + + Y VL N+YA +W+ +VR +M+E
Sbjct: 585 TLFSACCLHLEHSLGDRIARLLVE-NYPDDASTYMVLF-NLYASGESWDAARRVRLKMKE 642
Query: 748 RGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNA 795
GLRK+ GCSWI++ V F ++D+ H ++ +YE L L+ M +
Sbjct: 643 MGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHMESG 690
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 256/542 (47%), Gaps = 47/542 (8%)
Query: 58 ARQLFDSI-TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
AR +F++ R IWN+++ G+ N++ ++ + ++ ++ S D++T+ +V+KA
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP-DSFTFPNVIKA 116
Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
+G+ +H ++ V +SL+ MY+ ++ +
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK------------------FNLF 158
Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
+ +VFD M R+V +WNT++S + ++ +A+ F M G P+++S A
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
S L + ++ VK G E D +V S+ + MY + C + AR++F ++
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFEL--DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
WN+MI GYV +E+ +++ ++ T S L A S+ + L G+ +H Y+
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Query: 357 IKNFVALPVIVLNAVI-------------------ERDVV-SWNTMISAFVQNGLDDEGL 396
I++ V + V ++I ++DV SWN MIS+++ G + +
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAV 395
Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMY 455
+ +M G D VT T++L A S L + GKQ H + + E + S L+DMY
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
+K G K A +IF N +D +W MI+ Y +G EA F +M + + P+ VT
Sbjct: 456 SKCGNEKEAFRIF--NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 516 IASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
+ +VL AC G I+ G K +Y ++ + + +ID+ ++G + A + +
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 575 PE 576
PE
Sbjct: 574 PE 575
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 23/310 (7%)
Query: 57 LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
+AR++F + R + V WN++I G+V + + ++M S T +S+L A
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS--QTTLTSILMA 318
Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
C+ +RNL GK +H + IR N +V SL+++Y C +
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC------------------GEA 360
Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
+L VF ++ +WN ++S Y+ + +AV + M+ +G++P ++F +V PA
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
S L + ++ L S D + S+ + MY++ G A +IF++ +++
Sbjct: 421 SQLAALEKGKQIH--LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYI 356
W MI Y + P EA+ F ++ + + D VT L+ LSA +D G + + +
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 357 IKNFVALPVI 366
+ P+I
Sbjct: 538 RSKYGIEPII 547
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 20/188 (10%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G +LA +F + WN +I ++ ++A+ +Y QM S D T++S
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM--VSVGVKPDVVTFTS 415
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
VL AC++ L GK +H + ++LL+MYS C + +A
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA----------- 464
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
++F+++ +++VV+W ++S Y + EA+ QF M + G++P ++ + V
Sbjct: 465 -------FRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 233 FPALSSLG 240
A G
Sbjct: 518 LSACGHAG 525
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 235/758 (31%), Positives = 400/758 (52%), Gaps = 52/758 (6%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G P +R +F++ P + ++ +I V +L AI LY ++ S T + + S
Sbjct: 48 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL--VSETTQISKFVFPS 105
Query: 113 VLKACAETR-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
VL+ACA +R +L +G VH I+ + + SLL MY + DAE
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE--------- 156
Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
KVFD M R++VAW+T+VS ++ V+A+R F+ M+ G+ P ++ ++
Sbjct: 157 ---------KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMIS 207
Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
V + LG + A V+G + + + D + +S + MY++ G + +IF+ +
Sbjct: 208 VVEGCAELGCLRIARSVHGQITR--KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAK 265
Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
+N W MI Y + +A+ F ++++ I + VT S LS+ + + G+
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 352 LHAYIIK-----NFVALPV----------------IVLNAVIERDVVSWNTMISAFVQNG 390
+H + ++ N+ +L + VL V +R++V+WN++IS + G
Sbjct: 325 VHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRG 384
Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESY 450
+ + L L +M Q D+ T+ + +SA N +GKQ H +++R + E +++
Sbjct: 385 MVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNS 444
Query: 451 LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVT 510
LIDMY+KSG + +A +F N R TWN+M+ G++QNG EA F M +
Sbjct: 445 LIDMYSKSGSVDSASTVF--NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE 502
Query: 511 PNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
N VT +V+ AC+ +G++E GK +H I L +++F T+LIDMY+K G +N A V
Sbjct: 503 MNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETV 561
Query: 571 FAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLV 630
F + ++ V++++MI YG HG A+S F M G +P+ + F+ VLSAC ++G V
Sbjct: 562 FRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSV 621
Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
+EG F+LM+ + + P++EH+ C D+L R G + EAY +KE+ + +WGSL+
Sbjct: 622 EEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA-SVWGSLV 679
Query: 691 GSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGL 750
CR+H ++ + + L ++ T ++ GY+ LLSNIYAEEG WE ++R M+ L
Sbjct: 680 NGCRIHQKMDIIKAIKNDLSDIVTDDT--GYYTLLSNIYAEEGEWEEFRRLRSAMKSSNL 737
Query: 751 RKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
+K G S I++ V RF + ++ Q+ +IY L L
Sbjct: 738 KKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 249/546 (45%), Gaps = 47/546 (8%)
Query: 51 QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
Q G A ++FD + V W+T++ + N +A+ ++ M D T
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG--VEPDAVTM 205
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
SV++ CAE LRI ++VH R + + NSLL MYS C L +E
Sbjct: 206 ISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSE-------- 257
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
++F+ + ++N V+W ++S Y + E +A+R F M++ GI P+ ++
Sbjct: 258 ----------RIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 231 NVFPALSSLGDYKSADVVYGLLVK--LGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
+V + +G + V+G V+ L Y + ++ + + +YAE G +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYES---LSLALVELYAECGKLSDCETVLRV 364
Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
+RN WN++I Y ++A+ LF Q++ I D T S++SA + L
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT-QRIKPDAFTLASSISACENAGLVPL 423
Query: 349 GQQLHAYIIKN-----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQN 389
G+Q+H ++I+ FV +I V N + R VV+WN+M+ F QN
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMES 449
G E + L M ++ VT A++ A S++ + + GK H L+ G+ ++
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDT 543
Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
LIDMYAK G + A +F S R +W++MI Y +G + A F QM+E
Sbjct: 544 ALIDMYAKCGDLNAAETVFRAMSS--RSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
PN V +VL AC G++E GK + + N ID+ S+SG + A
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 570 VFAKIP 575
++P
Sbjct: 662 TIKEMP 667
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 31/293 (10%)
Query: 51 QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
+ G A +F+ I + V WN+++ GF N EAI L+ M S Y + T+
Sbjct: 451 KSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS--YLEMNEVTF 508
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
+V++AC+ +L GK VH H + F +L++MY+ C AE
Sbjct: 509 LAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAE-------- 559
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
VF M R++V+W+++++ Y R A+ F M+ G +P+ + F+
Sbjct: 560 ----------TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFA-RKIFDNC 289
NV A G + + L+ G ++ F + I + + G A R I +
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHF--ACFIDLLSRSGDLKEAYRTIKEMP 667
Query: 290 LERNTEVWNTMIGG--YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAV 340
+ VW +++ G Q ++AI+ +L +IV DD + + LS +
Sbjct: 668 FLADASVWGSLVNGCRIHQKMDIIKAIK-----NDLSDIVTDDTGYYTLLSNI 715
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 327/603 (54%), Gaps = 60/603 (9%)
Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCF---DFARKIFDNCLERNTEVWNTMIGGY 304
+G +++ G+ +D + AS +F A L F ++ARK+FD + N+ WNT+I Y
Sbjct: 49 THGHMIRTGT--FSDPYSASK-LFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAY 105
Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
PV +I F+ ++ + + TF + A +++ L LGQ LH +K+ V
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSD 165
Query: 365 VIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
V V N++I E+DVVSWN+MI+ FVQ G D+ L L +M+
Sbjct: 166 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 225
Query: 405 QGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKT 463
+ VT+ +LSA + +RN + G+Q +Y+ + ++ + + ++DMY K G I+
Sbjct: 226 EDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 285
Query: 464 ARQIFEKNDSGD-----------------------------RDQATWNAMIAGYTQNGLL 494
A+++F+ + D +D WNA+I+ Y QNG
Sbjct: 286 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKP 345
Query: 495 EEAFVAFRQM-LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
EA + F ++ L+ N+ N +T+ S L AC +G +ELG+ +H + ++ + N V ++
Sbjct: 346 NEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSA 405
Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
LI MYSK G + + VF + +++ ++ MI G HG A+ +F M+ ++P+
Sbjct: 406 LIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFV 673
+TF V ACS+ GLVDE +F M+ Y I P +HY C+ D+LGR G + +A +F+
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 674 KELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEG 733
+ + + +WG+LLG+C++H + LAE+ +LLE++ RN G HVLLSNIYA+ G
Sbjct: 526 EAMPIPPST-SVWGALLGACKIHANLNLAEMACTRLLELEPRND--GAHVLLSNIYAKLG 582
Query: 734 NWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
WENV ++RK MR GL+KE GCS I++ G ++ F S D HP S K+Y L + +++
Sbjct: 583 KWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Query: 794 NAG 796
+ G
Sbjct: 643 SNG 645
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 151/545 (27%), Positives = 255/545 (46%), Gaps = 83/545 (15%)
Query: 101 PYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSS 158
P T+ + + S+++ C R L K H H IR FS+P YS S
Sbjct: 24 PTTNNERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDP-----------YSA--SK 67
Query: 159 LDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMM 217
L A + ++Y++ KVFD + + N AWNT++ Y V ++ F M+
Sbjct: 68 LFAMAALSSFASLEYAR-----KVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG 277
P+ +F + A + + ++G+ VK S +D+FVA+S I Y G
Sbjct: 123 SESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK--SAVGSDVFVANSLIHCYFSCG 180
Query: 278 CFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSAL 337
D A K+F E++ WN+MI G+VQ P +A+ELF + +E +++ VT + L
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELF-KKMESEDVKASHVTMVGVL 239
Query: 338 SAVSQLQELDLGQQLHAYIIKNFVALPVI------------------------------- 366
SA ++++ L+ G+Q+ +YI +N V + +
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 367 --------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 406
VLN++ ++D+V+WN +ISA+ QNG +E L++ +E+Q Q
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 407 FM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
M ++ +T+ + LSA + + ++G+ H+Y+ +HGI + S LI MY+K G ++ +
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
R++F N RD W+AMI G +G EA F +M E NV PN VT +V AC+
Sbjct: 420 REVF--NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 525 PMGNIELGKQL-HGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
G ++ + L H Y + ++D+ +SG + A +P S +
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537
Query: 584 TMILG 588
+LG
Sbjct: 538 GALLG 542
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/583 (23%), Positives = 247/583 (42%), Gaps = 104/583 (17%)
Query: 3 SSSVPLPLPPPPPTATPPPP--------------------QLPQIHSLSPPIPKLKTPTI 42
S++ PL LP P + P P QL Q H P
Sbjct: 5 STAQPLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS 64
Query: 43 RSRL---SKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
S+L + + AR++FD I +P + WNT+I + P +I + M
Sbjct: 65 ASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 100 SPYTSC--DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLS 157
S C + YT+ ++KA AE +L +G+++H ++ FV NSL++ Y +C
Sbjct: 125 S---QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC-- 179
Query: 158 SLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMM 217
D CKVF T++ ++VV+WN++++ +V+ +A+ F+ M
Sbjct: 180 ----------------GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 218 LRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN-DLFVASSAIFMYAEL 276
++ S ++ V V A + + + + V + + VN +L +A++ + MY +
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE---NRVNVNLTLANAMLDMYTKC 280
Query: 277 GCFDFARKIFDNCLERNTEVWNTMIGGYV------------------------------- 305
G + A+++FD E++ W TM+ GY
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYE 340
Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-----NF 360
QN P EA+ +F ++ + + +T +S LSA +Q+ L+LG+ +H+YI K NF
Sbjct: 341 QNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400
Query: 361 VALPVI---------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
+ V N+V +RDV W+ MI +G +E + + Y+MQ+
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQT-HAYLLRHGIHFEGME-SYLIDMYAKSGLIKT 463
+ VT T + A S+ D + H +GI E + ++D+ +SG ++
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520
Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
A + E + W A++ + L A +A ++LE
Sbjct: 521 AVKFIEAMPIPP-STSVWGALLGACKIHANLNLAEMACTRLLE 562
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 358 bits (920), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 223/753 (29%), Positives = 386/753 (51%), Gaps = 46/753 (6%)
Query: 66 TRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRI 125
T T + N I +N EA+ + +K+S + TY S++ AC+ +R+L
Sbjct: 27 TIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSF-KIRLRTYISLICACSSSRSLAQ 85
Query: 126 GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDT 185
G+ +H H + + N +L+MY C S DA +VFD
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAR------------------EVFDF 127
Query: 186 MRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSA 245
M RN+V++ ++++ Y + + EA+R + ML+ + P +F ++ A +S D
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYV 305
++ ++KL E + L ++ I MY A ++F ++ W+++I G+
Sbjct: 188 KQLHAQVIKL--ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 306 QNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPV 365
Q EA+ ++L ++ F S+L A S L D G Q+H IK+ +A
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 366 IV-------------LNAV------IER-DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
I LN+ IER D SWN +I+ NG DE + + +M+
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
GF+ D++++ +LL A + G Q H+Y+++ G + + + L+ MY +
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
+FE + + D +WN ++ Q+ E F+ ML P+ +T+ ++L C
Sbjct: 426 FNLFE-DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCV 484
Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
+ +++LG Q+H +S++ L F+ LIDMY+K G + A +F + ++ V+++T
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
+I+GY Q G E AL LF+ MK GIEP+ +TFV VL+ACS+ GLV+EGL+++ MQ E+
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
I P+ EH CV D+L R G++ EA F+ E+ E +V+ +W +LL +C+ G+ LA+
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV-VWKTLLSACKTQGNVHLAQK 663
Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
A+ +L++D NS HVLL +++A GNWEN +R M++ ++K G SWI++
Sbjct: 664 AAENILKIDPFNSTA--HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
++ F ++D HP+ IY +L + +M + N
Sbjct: 722 IHIFFAEDIFHPERDDIYTVLHNIWSQMLDECN 754
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 155/563 (27%), Positives = 270/563 (47%), Gaps = 54/563 (9%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
AR++FD + V + ++I G+ N EAI LY +M + D + + S++KAC
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP--DQFAFGSIIKAC 178
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A + ++ +GK +H I+ S+ N+L+ MY V +++
Sbjct: 179 ASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY------------------VRFNQMS 220
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGI-RPSTISFVNVFPAL 236
+VF + +++++W++I++ + + EA+ + ML G+ P+ F + A
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 237 SSL--GDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
SSL DY S ++GL +K SE + S MYA G + AR++FD +T
Sbjct: 281 SSLLRPDYGSQ--IHGLCIK--SELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
WN +I G N + EA+ +F Q + + D ++ S L A ++ L G Q+H+
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQ-MRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 355 YIIKNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDD 393
YIIK + V N+++ D VSWNT+++A +Q+
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
E L L M D +T+ LL + + +G Q H Y L+ G+ E +++ LI
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
DMYAK G + AR+IF+ D +RD +W+ +I GY Q+G EEA + F++M + PN
Sbjct: 516 DMYAKCGSLGQARRIFDSMD--NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPN 573
Query: 513 VVTIASVLPACNPMGNIELGKQLHG-FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
VT VL AC+ +G +E G +L+ + + + ++D+ +++G +N A
Sbjct: 574 HVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFI 633
Query: 572 AKIP-EKNSVTYTTMILGYGQHG 593
++ E + V + T++ G
Sbjct: 634 DEMKLEPDVVVWKTLLSACKTQG 656
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 357 bits (916), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 233/747 (31%), Positives = 368/747 (49%), Gaps = 36/747 (4%)
Query: 83 NNLPYEAILLYSQMKKSSPYTSCDNYTYSS-VLKACAETRNLRIGKAVHCHFIRCFSNPS 141
N + + Q+++ SP T D + ++K +T R V R + +
Sbjct: 8 NEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAA 67
Query: 142 RFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
R VY+ + + + +++ + V V S DL FD M R VV W ++ WY
Sbjct: 68 RKVYDEMPHKNTVSTNTMISGHVKTGDVS---SARDL----FDAMPDRTVVTWTILMGWY 120
Query: 202 VKTERYVEAVRQFRMMLRMG--IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
+ + EA + FR M R P ++F + P + + V+ VKLG +
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
L V++ + Y E+ D A +F+ E+++ +NT+I GY ++ E+I LF++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLK 240
Query: 320 VLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------- 372
+ + D TF L AV L + LGQQLHA + + V N ++
Sbjct: 241 MRQSGHQP-SDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
E D VS+N +IS++ Q + L EMQ GF + +LS
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 420 AASNLRNQDVGKQTHAY-LLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
A+NL + +G+Q H LL + + L+DMYAK + + A IF+ R
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS--LPQRTT 417
Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
+W A+I+GY Q GL F +M N+ + T A+VL A ++ LGKQLH F
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
IR +NVF G+ L+DMY+K G I A VF ++P++N+V++ +I + +G E A
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
+ F M G++PD+++ + VL+ACS+ G V++G + F M Y I P +HY C+ D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
+LGR G+ EA + + E+ E + + +W S+L +CR+H + LAE A+KL M+
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEPDEI-MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDA 656
Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
Y V +SNIYA G WE V V+K MRERG++K SW++V ++ F+S DQ HP
Sbjct: 657 AAY-VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 779 HKIYEMLERLAMEMRNAGNKTIQNSNV 805
+I + L E+ G K +S V
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVV 742
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 169/639 (26%), Positives = 294/639 (46%), Gaps = 64/639 (10%)
Query: 23 QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
Q+ + +P T + + +S + G AR LFD++ T V W TI++G+
Sbjct: 63 QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTW-TILMGWYA 121
Query: 83 NNLPY-EAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCF--SN 139
N + EA L+ QM +SS T D+ T++++L C + VH ++ +N
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
P V N LL Y + + DL C +F+ + ++ V +NT+++
Sbjct: 182 PFLTVSNVLLKSY------------------CEVRRLDLACVLFEEIPEKDSVTFNTLIT 223
Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
Y K Y E++ F M + G +PS +F V A+ L D+ ++ L V G +
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG--F 281
Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELF-- 317
D V + + Y++ R +FD E + +N +I Y Q + ++ F
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 318 VQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA-----------YIIKNFVAL--- 363
+Q + D F F + LS + L L +G+QLH ++ + V +
Sbjct: 342 MQCMGFDRRNF---PFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK 398
Query: 364 ------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTAL 417
++ ++ +R VSW +IS +VQ GL GL L +M+ D T +
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458
Query: 418 LSAASNLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSG 474
L A+++ + +GKQ HA+++R G F G S L+DMYAK G IK A Q+FE +
Sbjct: 459 LKASASFASLLLGKQLHAFIIRSGNLENVFSG--SGLVDMYAKCGSIKDAVQVFE--EMP 514
Query: 475 DRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQ 534
DR+ +WNA+I+ + NG E A AF +M+E + P+ V+I VL AC+ G +E G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 535 -LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILG---Y 589
S Y + ++D+ ++G A + ++P E + + +++++ +
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
++ERA SM+ DA +V++ + + AG
Sbjct: 635 KNQSLAERAAEKLFSMEKL---RDAAAYVSMSNIYAAAG 670
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 356 bits (914), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 228/767 (29%), Positives = 382/767 (49%), Gaps = 49/767 (6%)
Query: 51 QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
+ G LAR++FD + W +I G N EAI L+ M + Y +
Sbjct: 234 RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPT--PYAF 291
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
SSVL AC + +L IG+ +H ++ + +V N+L+++Y + + AE
Sbjct: 292 SSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE-------- 343
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
+F M +R+ V +NT+++ + +A+ F+ M G+ P + +
Sbjct: 344 ----------HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
++ A S+ G ++ KLG + ++ + + + +YA+ + A F
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLG--FASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
N +WN M+ Y + + +F Q ++++EIV + T+ S L +L +L+LG+
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQ-MQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 351 QLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNG 390
Q+H+ IIK L V + +I+ +DVVSW TMI+ + Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
DD+ L +M +G D V +T +SA + L+ G+Q HA G + ++
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
L+ +Y++ G I+ + FE+ ++GD WNA+++G+ Q+G EEA F +M +
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGD--NIAWNALVSGFQQSGNNEEALRVFVRMNREGI 688
Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
N T S + A + N++ GKQ+H + D V +LI MY+K G I+ A
Sbjct: 689 DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEK 748
Query: 570 VFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGL 629
F ++ KN V++ +I Y +HG AL F M + P+ +T V VLSACS+ GL
Sbjct: 749 QFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGL 808
Query: 630 VDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSL 689
VD+G+ F+ M EY + P EHY CV DML R G + A EF++E+ + + L +W +L
Sbjct: 809 VDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL-VWRTL 867
Query: 690 LGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERG 749
L +C +H + E+ E A LLE++ +S +VLLSN+YA W+ D R++M+E+G
Sbjct: 868 LSACVVHKNMEIGEFAAHHLLELEPEDSAT--YVLLSNLYAVSKKWDARDLTRQKMKEKG 925
Query: 750 LRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
++KE G SWI+V ++ F DQ HP + +I+E + L G
Sbjct: 926 VKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIG 972
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 255/549 (46%), Gaps = 40/549 (7%)
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
KVFD M R + WN ++ E F M+ + P+ +F V A G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR--G 198
Query: 241 DYKSADVVYGLLVKLGSEYVND-LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
+ DVV + ++ + + D V + I +Y+ G D AR++FD ++ W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
MI G +N EAI LF + L I+ F S LSA +++ L++G+QLH ++K
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
+ V NA++ +RD V++NT+I+ Q G ++ + L
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKS 458
M G DS T+ +L+ A S G+Q HAY + G +E L+++YAK
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 459 GLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIAS 518
I+TA F + + + WN M+ Y L +F FRQM + PN T S
Sbjct: 438 ADIETALDYFLETEV--ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 519 VLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKN 578
+L C +G++ELG+Q+H I+ N +V + LIDMY+K G ++ A ++ + K+
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 579 SVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI-- 636
V++TTMI GY Q+ ++AL+ FR M GI D + +SAC+ + EG QI
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 637 ---FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
+ Q + + + R GK+ E+Y E E G+ + W +L+
Sbjct: 616 QACVSGFSSDLPFQNA------LVTLYSRCGKIEESY-LAFEQTEAGDNIA-WNALVSGF 667
Query: 694 RLHGHSELA 702
+ G++E A
Sbjct: 668 QQSGNNEEA 676
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 175/671 (26%), Positives = 309/671 (46%), Gaps = 56/671 (8%)
Query: 52 EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYS 111
+G + A ++FD + T WN +I NL E L+ +M S + + T+S
Sbjct: 133 KGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM--VSENVTPNEGTFS 190
Query: 112 SVLKAC-AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
VL+AC + + + +H + S V N L+++YS
Sbjct: 191 GVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---------------- 234
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
DL +VFD +R ++ +W ++S K E EA+R F M +GI P+ +F
Sbjct: 235 --NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
+V A + + + ++GL++KLG + +D +V ++ + +Y LG A IF N
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLG--FSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
+R+ +NT+I G Q + +A+ELF + + LD + D T S + A S L GQ
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELF-KRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 351 QLHAYIIKNFVA---------LPVIVLNAVIE-----------RDVVSWNTMISAFVQNG 390
QLHAY K A L + A IE +VV WN M+ A+ G
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY---G 466
Query: 391 LDDE---GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG- 446
L D+ + +MQ + + + T ++L L + ++G+Q H+ +++
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 447 MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
+ S LIDMYAK G + TA I + +D +W MIAGYTQ ++A FRQML+
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
+ + V + + + AC + ++ G+Q+H + ++ +L+ +YS+ G I
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEE 644
Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
+ F + +++ + ++ G+ Q G +E AL +F M GI+ + TF + + A S
Sbjct: 645 SYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASE 704
Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIW 686
+ +G Q+ ++ + TE + M + G + +A + E+ + V W
Sbjct: 705 TANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEV--SW 761
Query: 687 GSLLGSCRLHG 697
+++ + HG
Sbjct: 762 NAIINAYSKHG 772
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 236/532 (44%), Gaps = 49/532 (9%)
Query: 221 GIRPSTISFVNVFPA-LSSLGDYKSADVVYGLLVKLG-------SEYVNDLFVASSAIFM 272
GIRP+ + + L + G ++ ++KLG SE + D ++ ++
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY- 137
Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
G F K+FD ER WN MI N E LFV+++ + + ++ T
Sbjct: 138 ----GAF----KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGT 188
Query: 333 FLSALSAVSQLQ-ELDLGQQLHAYII--------------------KNFVALPVIVLNAV 371
F L A D+ +Q+HA I+ FV L V + +
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGK 431
+D SW MIS +N + E + L +M G M +++LSA + + ++G+
Sbjct: 249 RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE 308
Query: 432 QTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQ 490
Q H +L+ G + + + L+ +Y G + +A IF ++ RD T+N +I G +Q
Sbjct: 309 QLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIF--SNMSQRDAVTYNTLINGLSQ 366
Query: 491 NGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFV 550
G E+A F++M + P+ T+AS++ AC+ G + G+QLH ++ + N +
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426
Query: 551 GTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGI 610
+L+++Y+K I A + F + +N V + M++ YG + +FR M+ I
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 611 EPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCC--VADMLGRVGKVVE 668
P+ T+ ++L C G ++ G QI Q K Y C + DM ++GK+
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 669 AYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
A++ + G + W +++ + + A +++L+ R+ G
Sbjct: 544 AWDILIRFA--GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 227/776 (29%), Positives = 403/776 (51%), Gaps = 67/776 (8%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A F+ + V WN+++ G++ N ++I ++ M + D T++ +LK C
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG--IEFDGRTFAIILKVC 190
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ + +G +H +R + ++LL+MY+ G ++VE
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK----------GKRFVES------ 234
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
+VF + +N V+W+ I++ V+ A++ F+ M ++ S + +V + +
Sbjct: 235 --LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
+L + + ++ +K S++ D V ++ + MYA+ A+ +FDN N + +
Sbjct: 293 ALSELRLGGQLHAHALK--SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
N MI GY Q H +A+ LF +++ + FD+++ A + ++ L G Q++ I
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
K+ ++L V V NA I+ RD VSWN +I+A QNG E L
Sbjct: 410 KSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGMESYLIDMYA 456
L M + D T ++L A + + G + H+ +++ G+ + LIDMY+
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYS 528
Query: 457 KSGLIKTARQIFEK-----NDSGDRDQ-------------ATWNAMIAGYTQNGLLEEAF 498
K G+I+ A +I + N SG ++ +WN++I+GY E+A
Sbjct: 529 KCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQ 588
Query: 499 VAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMY 558
+ F +M+E +TP+ T A+VL C + + LGKQ+H I+ L +V++ ++L+DMY
Sbjct: 589 MLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 559 SKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFV 618
SK G ++ + +F K ++ VT+ MI GY HG E A+ LF M I+P+ +TF+
Sbjct: 649 SKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFI 708
Query: 619 AVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGE 678
++L AC++ GL+D+GL+ F +M+++Y + P HY + D+LG+ GKV A E ++E+
Sbjct: 709 SILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPF 768
Query: 679 EGNVLEIWGSLLGSCRLHGHS-ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
E + + IW +LLG C +H ++ E+AE LL +D ++S + LLSN+YA+ G WE
Sbjct: 769 EADDV-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA--YTLLSNVYADAGMWEK 825
Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
V +R+ MR L+KE GCSW+++ ++ F D+ HP+ +IYE L + EM+
Sbjct: 826 VSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 179/666 (26%), Positives = 306/666 (45%), Gaps = 70/666 (10%)
Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
S +S V K CA+ L +GK H H I P+ FV N LL +Y+ + A M
Sbjct: 45 SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 104
Query: 164 VGLKYVEVD----------YSKYDLVCKV---FDTMRRRNVVAWNTIVSWYVKTERYVEA 210
V K D YSK + + K F+ M R+VV+WN+++S Y++ +++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
+ F M R GI +F + S L D ++G++V++G + D+ AS+ +
Sbjct: 165 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCD--TDVVAASALL 222
Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
MYA+ F + ++F E+N+ W+ +I G VQNN A++ F ++ +++ V
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS 282
Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER---------------- 374
+ + S L + + L EL LG QLHA+ +K+ A IV A ++
Sbjct: 283 I-YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 375 ----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVG 430
+ S+N MI+ + Q + L+L + + G D ++++ + A + ++ G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 431 KQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYT 489
Q + ++ + + + + IDMY K + A ++F++ RD +WNA+IA +
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR--RDAVSWNAIIAAHE 459
Query: 490 QNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVF 549
QNG E F ML + P+ T S+L AC G++ G ++H ++ + N
Sbjct: 460 QNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS 518
Query: 550 VGTSLIDMYSKSGVINYAANVFAKIPEKNS--------------------VTYTTMILGY 589
VG SLIDMYSK G+I A + ++ ++ + V++ ++I GY
Sbjct: 519 VGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
SE A LF M GI PD T+ VL C+ G QI Q K +
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH---AQVIKKELQ 635
Query: 650 TEHYCC--VADMLGRVGKVVEA-YEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA-EVV 705
++ Y C + DM + G + ++ F K L + W +++ HG E A ++
Sbjct: 636 SDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD---FVTWNAMICGYAHHGKGEEAIQLF 692
Query: 706 AKKLLE 711
+ +LE
Sbjct: 693 ERMILE 698
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG-----------FSIRYLL- 544
+F F L + + + V C G +ELGKQ H F + LL
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 545 ---DQNVFVGTSL----------------IDMYSKSGVINYAANVFAKIPEKNSVTYTTM 585
+ FV S+ I+ YSKS + A + F +P ++ V++ +M
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 586 ILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYK 645
+ GY Q+G S +++ +F M GIE D TF +L CS+ G+QI ++ +
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV---VR 208
Query: 646 IQPSTEHYCCVA--DMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
+ T+ A DM + + VE+ + + E+ +V W +++ C
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV--SWSAIIAGC 256
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
G H +R +F+ R V WN +I G+ + EAI L+ +M + P ++ T+
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKP----NHVTF 707
Query: 111 SSVLKACA 118
S+L+ACA
Sbjct: 708 ISILRACA 715
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 231/726 (31%), Positives = 382/726 (52%), Gaps = 58/726 (7%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAIL-LYSQMKKSSPYTSCDNYTYSSVLKA 116
A ++F WNTII G + N Y A+ L+ +M + D+YTYSSVL A
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGAL-RNQNYGAVFDLFHEM--CVGFQKPDSYTYSSVLAA 260
Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKY 176
CA LR GK V I+C + FV +++++Y+ C +A
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAM-------------- 305
Query: 177 DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPAL 236
+VF + +VV+W ++S Y K+ A+ F+ M G+ + + +V A
Sbjct: 306 ----EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE-RNTE 295
A V+ + K G + D VA++ I MY++ G D + ++F++ + +
Sbjct: 362 GRPSMVCEASQVHAWVFKSG--FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQN 419
Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
+ N MI + Q+ P +AI LF ++L+ + + D+ + S LS L L+LG+Q+H Y
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQ-EGLRTDEFSVCSLLSV---LDCLNLGKQVHGY 475
Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
+K+ + L + V +++ +D W +MIS F + G E
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREA 535
Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLID 453
+ L EM G D T+ A+L+ S+ + GK+ H Y LR GI +GM+ S L++
Sbjct: 536 IGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGID-KGMDLGSALVN 594
Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
MY+K G +K ARQ++++ + D + +++I+GY+Q+GL+++ F+ FR M+ T +
Sbjct: 595 MYSKCGSLKLARQVYDRLP--ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 514 VTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK 573
I+S+L A LG Q+H + + L VG+SL+ MYSK G I+ F++
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 574 IPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEG 633
I + + +T +I Y QHG + AL ++ MK G +PD +TFV VLSACS+ GLV+E
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 634 LQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSC 693
+ M ++Y I+P HY C+ D LGR G++ EA F+ + + + L +WG+LL +C
Sbjct: 773 YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDAL-VWGTLLAAC 831
Query: 694 RLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
++HG EL +V AKK +E++ ++ G ++ LSNI AE G W+ V++ RK M+ G++KE
Sbjct: 832 KIHGEVELGKVAAKKAIELEPSDA--GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 754 VGCSWI 759
G S +
Sbjct: 890 PGWSSV 895
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 185/709 (26%), Positives = 333/709 (46%), Gaps = 68/709 (9%)
Query: 23 QLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVC 82
++ Q H L + +S LS G A +LFD+I +P V N +I G+
Sbjct: 68 KILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQ 127
Query: 83 NNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR 142
+ L E++ +S+M + +Y SV+ AC+ + + V CH I+
Sbjct: 128 HRLFEESLRFFSKMHFLG--FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE 185
Query: 143 FVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYV 202
V ++L++++S L DA KVF NV WNTI++ +
Sbjct: 186 VVESALIDVFSKNLRFEDAY------------------KVFRDSLSANVYCWNTIIAGAL 227
Query: 203 KTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVND 262
+ + Y F M +P + ++ +V A +SL + VV ++K G+E D
Sbjct: 228 RNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE---D 284
Query: 263 LFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLE 322
+FV ++ + +YA+ G A ++F + W M+ GY ++N A+E+F + +
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE-MR 343
Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI---------- 372
+ ++ T S +SA + + Q+HA++ K+ L V A+I
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 373 -------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
+++V N MI++F Q+ + + L M ++G D +V +LLS
Sbjct: 404 LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
L ++GKQ H Y L+ G+ + + S L +Y+K G ++ + ++F+ +D
Sbjct: 462 VLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPF--KDN 516
Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
A W +MI+G+ + G L EA F +ML+ +P+ T+A+VL C+ ++ GK++HG+
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
++R +D+ + +G++L++MYSK G + A V+ ++PE + V+ +++I GY QHG+ +
Sbjct: 577 TLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDG 636
Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDE---GLQIFDLMQQEYKIQPSTEHYC- 654
LFR M G D+ ++L A A L DE G Q+ + KI TE
Sbjct: 637 FLLFRDMVMSGFTMDSFAISSILKA---AALSDESSLGAQVHAYIT---KIGLCTEPSVG 690
Query: 655 -CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
+ M + G + + + ++ G L W +L+ S HG + A
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQI--NGPDLIAWTALIASYAQHGKANEA 737
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 262/528 (49%), Gaps = 52/528 (9%)
Query: 122 NLRIGKAVHCHFIRCFSNP-SRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVC 180
NLR K + H +R + P F+ SLL+ YS S DA
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAA------------------ 104
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
K+FDT+ + +VV+ N ++S Y + + E++R F M +G + IS+ +V A S+L
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
+++V +K+G Y V S+ I ++++ F+ A K+F + L N WNT+
Sbjct: 165 APLFSELVCCHTIKMG--YFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI 222
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVF---DDVTFLSALSAVSQLQELDLGQQLHAYII 357
I G ++N + +LF ++ + F D T+ S L+A + L++L G+ + A +I
Sbjct: 223 IAGALRNQNYGAVFDLFHEMC----VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 358 KN-----FVALPVIVLNA----------VIER----DVVSWNTMISAFVQNGLDDEGLML 398
K FV ++ L A V R VVSW M+S + ++ L +
Sbjct: 279 KCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEI 338
Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAK 457
EM+ G I++ TVT+++SA Q HA++ + G + + + + LI MY+K
Sbjct: 339 FKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSK 398
Query: 458 SGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIA 517
SG I + Q+FE D R Q N MI ++Q+ +A F +ML+ + + ++
Sbjct: 399 SGDIDLSEQVFEDLDDIQR-QNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVC 457
Query: 518 SVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
S+L + + LGKQ+HG++++ L ++ VG+SL +YSK G + + +F IP K
Sbjct: 458 SLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK 514
Query: 578 NSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
++ + +MI G+ ++G A+ LF M G PD T AVL+ CS
Sbjct: 515 DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 352 bits (903), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 232/740 (31%), Positives = 383/740 (51%), Gaps = 109/740 (14%)
Query: 105 CDNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
C N SV K+ N R + VHC I+ S ++ N+L+N+YS +L A
Sbjct: 16 CTNLLQKSVNKS-----NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 164 V----------GLKYVEVDYSK---YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
+ V YSK D C+ FD + +R+ V+W T++ Y +Y +A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
+R M++ GI P+ + NV ++++ ++ V+ +VKLG ++ V++S +
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR--GNVSVSNSLL 188
Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
MYA+ G A+ +FD + R+ WN MI L +QV ++D
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA-------------LHMQVGQMD------ 229
Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNG 390
A++Q +++ ERD+V+WN+MIS F Q G
Sbjct: 230 -------LAMAQFEQM-------------------------AERDIVTWNSMISGFNQRG 257
Query: 391 LDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME- 448
D L + +M + + D T+ ++LSA +NL +GKQ H++++ G G+
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGD-------------------------------RD 477
+ LI MY++ G ++TAR++ E+ + D RD
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 478 QATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHG 537
W AMI GY Q+G EA FR M+ PN T+A++L + + ++ GKQ+HG
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 538 FSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSE 596
+++ +V V +LI MY+K+G I A+ F I E+++V++T+MI+ QHG +E
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 597 RALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCV 656
AL LF +M G+ PD IT+V V SAC++AGLV++G Q FD+M+ KI P+ HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 657 ADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRN 716
D+ GR G + EA EF++++ E +V+ WGSLL +CR+H + +L +V A++LL ++ N
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVV-TWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 717 SMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHP 776
S G + L+N+Y+ G WE K+RK M++ ++KE G SWI+V V+ F +D HP
Sbjct: 617 S--GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Query: 777 QSHKIYEMLERLAMEMRNAG 796
+ ++IY ++++ E++ G
Sbjct: 675 EKNEIYMTMKKIWDEIKKMG 694
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 202/441 (45%), Gaps = 35/441 (7%)
Query: 51 QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
Q G+ LA F+ + V WN++I GF A+ ++S+M + S S D +T
Sbjct: 224 QVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS-LLSPDRFTL 282
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC------------LSS 158
+SVL ACA L IGK +H H + + S V N+L++MYS C +
Sbjct: 283 ASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGT 342
Query: 159 LDAEMVGLKYVEVDYSKY---DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
D ++ G + Y K + +F +++ R+VVAW ++ Y + Y EA+ FR
Sbjct: 343 KDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
M+ G RP++ + + SSL ++G VK G Y + V+++ I MYA+
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY--SVSVSNALITMYAK 460
Query: 276 LGCFDFARKIFD--NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTF 333
G A + FD C ER+T W +MI Q+ H EA+ELF +L ++ + D +T+
Sbjct: 461 AGNITSASRAFDLIRC-ERDTVSWTSMIIALAQHGHAEEALELFETML-MEGLRPDHITY 518
Query: 334 LSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
+ SA + ++ G+Q + +P + + M+ F + GL
Sbjct: 519 VGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTL----------SHYACMVDLFGRAGLLQ 568
Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID 453
E + +M + D VT +LLSA +N D+GK LL G S L +
Sbjct: 569 EAQEFIEKMPIEP---DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALAN 625
Query: 454 MYAKSGLIKTARQIFEKNDSG 474
+Y+ G + A +I + G
Sbjct: 626 LYSACGKWEEAAKIRKSMKDG 646
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 152/596 (25%), Positives = 242/596 (40%), Gaps = 114/596 (19%)
Query: 46 LSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC 105
LS + G + FD + + +V W T+I+G+ ++AI + M K +
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT- 145
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
+T ++VL + A TR + GK VH ++ + V NSLLNMY+ C + A+ V
Sbjct: 146 -QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 166 LKYVEVDYSKY-------------DLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVR 212
+ V D S + DL F+ M R++V WN+++S + + + A+
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 213 QFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF 271
F MLR + P + +V A ++L ++ +V G + V ++ I
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG--IVLNALIS 322
Query: 272 MYAELGCFDFARK---------------------------------IFDNCLERNTEVWN 298
MY+ G + AR+ IF + +R+ W
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 299 TMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK 358
MI GY Q+ EAI LF ++ + + T + LS S L L G+Q+H +K
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRP-NSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 359 NFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGLM 397
+ V V NA+I ERD VSW +MI A Q+G +E L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALE 501
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAK 457
L M +G D +T + SA THA
Sbjct: 502 LFETMLMEGLRPDHITYVGVFSAC-----------THA---------------------- 528
Query: 458 SGLIKTARQIFEKNDSGDRDQAT---WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
GL+ RQ F+ D+ T + M+ + + GLL+EA +M + P+VV
Sbjct: 529 -GLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVV 584
Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANV 570
T S+L AC NI+LGK + + L +N ++L ++YS G AA +
Sbjct: 585 TWGSLLSACRVHKNIDLGK-VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKI 639
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 37 LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
LK + L + G + A+ +F S+ V W +I+G+ + EAI L+ M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 97 KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
++YT +++L + +L GK +H ++ S V N+L+ MY+
Sbjct: 405 VGGGQRP--NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMR-RRNVVAWNTIVSWYVKTERYVEAVRQFR 215
+ A + FD +R R+ V+W +++ + EA+ F
Sbjct: 463 NITSAS------------------RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 216 MMLRMGIRPSTISFVNVFPALSSLG 240
ML G+RP I++V VF A + G
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAG 529
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 351 bits (900), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 330/618 (53%), Gaps = 60/618 (9%)
Query: 183 FDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDY 242
F T++ V+AW +++ + + +A+ F M G P F +V + + + D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 243 KSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE---LGCFDFARKIFDNCLERNTEVWNT 299
+ + V+G +V+LG + DL+ ++ + MYA+ +G +FD +R +
Sbjct: 122 RFGESVHGFIVRLGMDC--DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSN---- 175
Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
+ V+A E + +D + +
Sbjct: 176 ------SGDEDVKA-ETCIMPFGIDSVR------------------------------RV 198
Query: 360 FVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLS 419
F +P +DVVS+NT+I+ + Q+G+ ++ L +V EM DS T++++L
Sbjct: 199 FEVMP--------RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 420 AASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQ 478
S + GK+ H Y++R GI + + S L+DMYAKS I+ + ++F + RD
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYC--RDG 308
Query: 479 ATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGF 538
+WN+++AGY QNG EA FRQM+ V P V +SV+PAC + + LGKQLHG+
Sbjct: 309 ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERA 598
+R N+F+ ++L+DMYSK G I A +F ++ + V++T +I+G+ HG A
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 599 LSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVAD 658
+SLF MK G++P+ + FVAVL+ACS+ GLVDE F+ M + Y + EHY VAD
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 659 MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSM 718
+LGR GK+ EAY F+ ++ E +W +LL SC +H + ELAE VA+K+ +D+ N
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTG-SVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENM- 546
Query: 719 PGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQS 778
G +VL+ N+YA G W+ + K+R MR++GLRK+ CSWI++ + F S D+ HP
Sbjct: 547 -GAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSM 605
Query: 779 HKIYEMLERLAMEMRNAG 796
KI E L+ + +M G
Sbjct: 606 DKINEFLKAVMEQMEKEG 623
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 144/601 (23%), Positives = 263/601 (43%), Gaps = 80/601 (13%)
Query: 1 MASSSVPLPLPPPPPTATPPPPQLPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQ 60
M+SS + PT Q Q+H+ L + +S H A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60
Query: 61 LFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-DNYTYSSVLKACAE 119
LF ++ P + W ++I F +L +A+ + +M+ S C D+ + SVLK+C
Sbjct: 61 LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG---RCPDHNVFPSVLKSCTM 117
Query: 120 TRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK---- 175
+LR G++VH +R + + N+L+NMY+ L VG + E+
Sbjct: 118 MMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSG 177
Query: 176 --------------YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG 221
D V +VF+ M R++VV++NTI++ Y ++ Y +A+R R M
Sbjct: 178 DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD 237
Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
++P + + +V P S D ++G +++ G + +D+++ SS + MYA+ +
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID--SDVYIGSSLVDMYAKSARIED 295
Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
+ ++F R+ WN+++ GYVQN EA+ LF Q++ ++ V F S + A +
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACA 354
Query: 342 QLQELDLGQQLHAYIIKNFVALPVIVLNAVIER--------------------DVVSWNT 381
L L LG+QLH Y+++ + + +A+++ D VSW
Sbjct: 355 HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
+I +G E + L EM++QG + V A+L+A S+ VG A+
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH-----VGLVDEAW----- 464
Query: 442 IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAF 501
Y M GL +++ + A+ + G LEEA+
Sbjct: 465 -------GYFNSMTKVYGL--------------NQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 502 RQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKS 561
+M V P +++L +C+ N+EL +++ I + +N+ + +MY+ +
Sbjct: 504 SKMC---VEPTGSVWSTLLSSCSVHKNLELAEKV-AEKIFTVDSENMGAYVLMCNMYASN 559
Query: 562 G 562
G
Sbjct: 560 G 560
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
+ L+ + ++++ KQ HA +R S +I +Y L+ A +F+ S
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKS 67
Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGK 533
W ++I +T L +A +F +M P+ SVL +C M ++ G+
Sbjct: 68 PP--VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSK-----------------------SG-------- 562
+HGF +R +D +++ G +L++MY+K SG
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 563 -----VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
I+ VF +P K+ V+Y T+I GY Q GM E AL + R M ++PD+ T
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 618 VAVL 621
+VL
Sbjct: 246 SSVL 249
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 207/598 (34%), Positives = 325/598 (54%), Gaps = 67/598 (11%)
Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
+++ +S + +LG D A +F + ER+ WN+M+ G+ Q++ EA+ F ++
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA-MM 143
Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------- 372
+ V ++ +F S LSA S L +++ G Q+H+ I K+ V + +A++
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 373 -----------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
+R+VVSWN++I+ F QNG E L + M + D VT+ +++SA
Sbjct: 204 NDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 422 SNLRNQDVGKQTHAYL-----LRHGIHFEGMESYLIDMYAKSGLIKTARQIFEK------ 470
++L VG++ H + LR+ I + + +DMYAK IK AR IF+
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDII---LSNAFVDMYAKCSRIKEARFIFDSMPIRNV 320
Query: 471 -----------------------NDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
+R+ +WNA+IAGYTQNG EEA F +
Sbjct: 321 IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE 380
Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQL------HGFSIRYLLDQNVFVGTSLIDMYSKS 561
+V P + A++L AC + + LG Q HGF + + ++FVG SLIDMY K
Sbjct: 381 SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKC 440
Query: 562 GVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVL 621
G + VF K+ E++ V++ MI+G+ Q+G AL LFR M G +PD IT + VL
Sbjct: 441 GCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVL 500
Query: 622 SACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGN 681
SAC +AG V+EG F M +++ + P +HY C+ D+LGR G + EA ++E+ + +
Sbjct: 501 SACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPD 560
Query: 682 VLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
+ IWGSLL +C++H + L + VA+KLLE++ NS P +VLLSN+YAE G WE+V V
Sbjct: 561 SV-IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGP--YVLLSNMYAELGKWEDVMNV 617
Query: 742 RKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
RK MR+ G+ K+ GCSWI + G+ + F KD+ HP+ +I+ +L+ L EMR + T
Sbjct: 618 RKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHT 675
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 170/667 (25%), Positives = 296/667 (44%), Gaps = 151/667 (22%)
Query: 106 DNYTYSSVLKACAETRNLRI-GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMV 164
D+ ++ +L +C +++ I + VH I+ + F+ N L++ YS C S D
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR-- 75
Query: 165 GLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIV-------------------------S 199
+VFD M +RN+ WN++V +
Sbjct: 76 ----------------QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCT 119
Query: 200 W------YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
W + + +R EA+ F MM + G + SF +V A S L D V+ L+
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
K S +++D+++ S+ + MY++ G + A+++FD +RN WN++I + QN VEA
Sbjct: 180 K--SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN-------------- 359
+++F +LE + D+VT S +SA + L + +GQ++H ++KN
Sbjct: 238 LDVFQMMLE-SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 360 ---------------FVALPV-----------------------IVLNAVIERDVVSWNT 381
F ++P+ ++ + ER+VVSWN
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
+I+ + QNG ++E L L ++++ + +L A ++L +G Q H ++L+HG
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 442 IHFEGME-------SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLL 494
F+ E + LIDMY K G ++ +F K +RD +WNAMI G+ QNG
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYG 474
Query: 495 EEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSL 554
EA FR+MLE P+ +T+ VL AC G +E G+ H FS
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HYFS--------------- 517
Query: 555 IDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDA 614
M GV P ++ YT M+ G+ G E A S+ M ++PD+
Sbjct: 518 -SMTRDFGV----------APLRDH--YTCMVDLLGRAGFLEEAKSMIEEMP---MQPDS 561
Query: 615 ITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEH-YCCVADMLGRVGKVVEAYEFV 673
+ + ++L+AC + G + ++ +++PS Y +++M +GK +
Sbjct: 562 VIWGSLLAACKVHRNITLGKYV---AEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 674 KELGEEG 680
K + +EG
Sbjct: 619 KSMRKEG 625
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 239/558 (42%), Gaps = 115/558 (20%)
Query: 34 IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
+P+ T S ++ + + G A LF S+ WN+++ GF ++ EA+ +
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 94 SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS 153
+ M K + Y+++SVL AC+ ++ G VH + ++ ++L++MYS
Sbjct: 141 AMMHKEGFVL--NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 154 TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ 213
C + DA+ +VFD M RNVV+WN++++ + + VEA+
Sbjct: 199 KCGNVNDAQ------------------RVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 214 FRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMY 273
F+MML + P ++ +V A +SL K V+G +VK + ND+ ++++ + MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK-NDKLRNDIILSNAFVDMY 299
Query: 274 AELGCFDFARKIFDN-------------------------------CLERNTEVWNTMIG 302
A+ AR IFD+ ERN WN +I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN--- 359
GY QN EA+ LF +L+ + + +F + L A + L EL LG Q H +++K+
Sbjct: 360 GYTQNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 360 ---------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
FV +I V ++ERD VSWN MI F QNG +E L
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
L EM + G D +T+ +LSA HA + G H Y M
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACG-----------HAGFVEEGRH------YFSSMTR 521
Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVT 515
G+ RD T M+ + G LEEA + M+E + P+ V
Sbjct: 522 DFGVAPL------------RDHYT--CMVDLLGRAGFLEEA----KSMIEEMPMQPDSVI 563
Query: 516 IASVLPACNPMGNIELGK 533
S+L AC NI LGK
Sbjct: 564 WGSLLAACKVHRNITLGK 581
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 212/455 (46%), Gaps = 39/455 (8%)
Query: 26 QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
Q+HSL P L I S L + + G + A+++FD + V WN++I F N
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 85 LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSR-- 142
EA+ ++ M +S D T +SV+ ACA +++G+ VH ++ ++ R
Sbjct: 233 PAVEALDVFQMMLESR--VEPDEVTLASVISACASLSAIKVGQEVHGRVVK--NDKLRND 288
Query: 143 -FVYNSLLNMYSTCLSSLDAEMV----GLKYVEVD---YSKYDLVCK------VFDTMRR 188
+ N+ ++MY+ C +A + ++ V + S Y + +F M
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
RNVV+WN +++ Y + EA+ F ++ R + P+ SF N+ A + L +
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 249 YGLLVKLGSEYV----NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGY 304
+ ++K G ++ +D+FV +S I MY + GC + +F +ER+ WN MI G+
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGF 468
Query: 305 VQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP 364
QN + EA+ELF ++LE E D +T + LSA ++ G+ + + ++F P
Sbjct: 469 AQNGYGNEALELFREMLESGEKP-DHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAP 527
Query: 365 VIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL 424
+ RD + M+ + G +E ++ EM Q DSV +LL+A
Sbjct: 528 L--------RD--HYTCMVDLLGRAGFLEEAKSMIEEMPMQP---DSVIWGSLLAACKVH 574
Query: 425 RNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSG 459
RN +GK LL G L +MYA+ G
Sbjct: 575 RNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/572 (33%), Positives = 322/572 (56%), Gaps = 32/572 (5%)
Query: 248 VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQN 307
++ L+ LG ++ F+ + I + G FAR++FD+ WN +I GY +N
Sbjct: 40 IHARLLVLGLQFSG--FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 308 NHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV 367
NH +A+ ++ ++L + D TF L A S L L +G+ +HA + + V V
Sbjct: 98 NHFQDALLMYSN-MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 368 LNAVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 405
N +I ER +VSW ++SA+ QNG E L + +M+K
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTA 464
D V + ++L+A + L++ G+ HA +++ G+ E + L MYAK G + TA
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
+ +F+K S + WNAMI+GY +NG EA F +M+ +V P+ ++I S + AC
Sbjct: 277 KILFDKMKSPN--LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
+G++E + ++ + R +VF+ ++LIDM++K G + A VF + +++ V ++
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
MI+GYG HG + A+SL+R+M+ G+ P+ +TF+ +L AC+++G+V EG F+ M ++
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADH 453
Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
KI P +HY CV D+LGR G + +AYE +K + + V +WG+LL +C+ H H EL E
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV-TVWGALLSACKKHRHVELGEY 512
Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
A++L +D N+ G++V LSN+YA W+ V +VR M+E+GL K+VGCSW++V G
Sbjct: 513 AAQQLFSIDPSNT--GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570
Query: 765 VNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
+ F D+ HP+ +I +E + ++ G
Sbjct: 571 LEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/549 (26%), Positives = 251/549 (45%), Gaps = 91/549 (16%)
Query: 57 LARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKA 116
ARQ+FD + RP WN II G+ NN +A+L+YS M+ + S D++T+ +LKA
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR--VSPDSFTFPHLLKA 128
Query: 117 CAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC--LSSLDAEMVGLKYVEVDYS 174
C+ +L++G+ VH R + FV N L+ +Y+ C L S GL E
Sbjct: 129 CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE---- 184
Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
R +V+W IVS Y + +EA+ F M +M ++P ++ V+V
Sbjct: 185 --------------RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
A + L D K ++ +VK+G E DL ++ + MYA+ G A+ +FD N
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT--MYAKCGQVATAKILFDKMKSPNL 288
Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
+WN MI GY +N + EAI++F +++ D + D ++ SA+SA +Q+ L+ + ++
Sbjct: 289 ILWNAMISGYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 355 YIIKN------FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
Y+ ++ F++ +I V + ++RDVV W+ MI + +G E
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRARE 407
Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLID 453
+ L M++ G + VT LL A + H+ ++R G F M + I
Sbjct: 408 AISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMVREGWWFFNRMADHKI- 455
Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 513
+ Q + +I + G L++A+ + M V P V
Sbjct: 456 ---------------------NPQQQHYACVIDLLGRAGHLDQAYEVIKCM---PVQPGV 491
Query: 514 VTIASVLPACNPMGNIELG----KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAAN 569
++L AC ++ELG +QL FSI N L ++Y+ + + + A
Sbjct: 492 TVWGALLSACKKHRHVELGEYAAQQL--FSID---PSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 570 VFAKIPEKN 578
V ++ EK
Sbjct: 547 VRVRMKEKG 555
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 24/313 (7%)
Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQ 466
+IDS T A L KQ HA LL G+ F G + + LI + G I ARQ
Sbjct: 27 LIDSATHKAQL------------KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 467 IFEKNDSGDRDQA-TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
+F D R Q WNA+I GY++N ++A + + M V+P+ T +L AC+
Sbjct: 75 VF---DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 526 MGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAK--IPEKNSVTYT 583
+ ++++G+ +H R D +VFV LI +Y+K + A VF +PE+ V++T
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIF-DLMQQ 642
++ Y Q+G AL +F M+ ++PD + V+VL+A + + +G I +++
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 643 EYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELA 702
+I+P + M + G+V A ++ +L W +++ +G++ A
Sbjct: 252 GLEIEPDL--LISLNTMYAKCGQVATAKILFDKMKSPNLIL--WNAMISGYAKNGYAREA 307
Query: 703 EVVAKKLLEMDTR 715
+ +++ D R
Sbjct: 308 IDMFHEMINKDVR 320
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM--KKSSPYTSCDNYTY 110
G+ A+ LFD + P ++WN +I G+ N EAI ++ +M K P D +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP----DTISI 326
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
+S + ACA+ +L ++++ + R F+ ++L++M++ C S A +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL------- 379
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
VFD R+VV W+ ++ Y R EA+ +R M R G+ P+ ++F+
Sbjct: 380 -----------VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 231 NVFPALSSLG 240
+ A + G
Sbjct: 429 GLLMACNHSG 438
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 246/768 (32%), Positives = 410/768 (53%), Gaps = 61/768 (7%)
Query: 62 FDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS-VLKACAET 120
F I +V WN+II + A ++S M+ + YT+ S V AC+ T
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT--EYTFGSLVTTACSLT 220
Query: 121 R-NLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLV 179
++R+ + + C + FV + L++ ++ K + Y++
Sbjct: 221 EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFA-------------KSGSLSYAR---- 263
Query: 180 CKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRM-GIRP-STISFVNVFP--A 235
KVF+ M RN V N ++ V+ + EA + F M M + P S + ++ FP +
Sbjct: 264 -KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYS 322
Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVA--SSAIFMYAELGCFDFARKIFDNCLERN 293
L+ K V+G ++ G + D V + + MYA+ G AR++F +++
Sbjct: 323 LAEEVGLKKGREVHGHVITTG---LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLH 353
+ WN+MI G QN +EA+E + + + +I+ T +S+LS+ + L+ LGQQ+H
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERY-KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 354 AYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLD- 392
+K + L V V NA++ E D VSWN++I A ++
Sbjct: 439 GESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSL 498
Query: 393 DEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM-ESYL 451
E ++ Q+ G ++ +T +++LSA S+L ++GKQ H L++ I E E+ L
Sbjct: 499 PEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENAL 558
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
I Y K G + +IF + + RD TWN+MI+GY N LL +A ML+
Sbjct: 559 IACYGKCGEMDGCEKIFSRM-AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRL 617
Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
+ A+VL A + +E G ++H S+R L+ +V VG++L+DMYSK G ++YA F
Sbjct: 618 DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFF 677
Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCG-IEPDAITFVAVLSACSYAGLV 630
+P +NS ++ +MI GY +HG E AL LF +MK G PD +TFV VLSACS+AGL+
Sbjct: 678 NTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLL 737
Query: 631 DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
+EG + F+ M Y + P EH+ C+AD+LGR G++ + +F++++ + NVL IW ++L
Sbjct: 738 EEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVL-IWRTVL 796
Query: 691 GS-CRLHGH-SELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
G+ CR +G +EL + A+ L +++ N++ +VLL N+YA G WE++ K RK+M++
Sbjct: 797 GACCRANGRKAELGKKAAEMLFQLEPENAVN--YVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
++KE G SW+ + V+ F + D+ HP + IY+ L+ L +MR+AG
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 181/707 (25%), Positives = 319/707 (45%), Gaps = 70/707 (9%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
AR++FD + V W I+ G+ N EA++ M K ++ + Y + SVL+AC
Sbjct: 55 ARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFS--NQYAFVSVLRAC 112
Query: 118 AETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSK 175
E ++ I G+ +H + V N L++MY C+ S+ + +EV
Sbjct: 113 QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV---- 168
Query: 176 YDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
+N V+WN+I+S Y + A R F M G RP+ +F ++
Sbjct: 169 -------------KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTT 215
Query: 236 LSSLG--DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERN 293
SL D + + + + K G + DLFV S + +A+ G +ARK+F+ RN
Sbjct: 216 ACSLTEPDVRLLEQIMCTIQKSG--LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 294 TEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD-VTFLSALSAVSQLQELDL--GQ 350
N ++ G V+ EA +LF+ + + ++ + V LS+ S +E+ L G+
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 351 QLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQN 389
++H ++I V V + N ++ ++D VSWN+MI+ QN
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GME 448
G E + M++ + S T+ + LS+ ++L+ +G+Q H L+ GI +
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-LEEAFVAFRQMLEH 507
+ L+ +YA++G + R+IF + + DQ +WN++I ++ L EA V F
Sbjct: 454 NALMTLYAETGYLNECRKIF--SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
N +T +SVL A + + ELGKQ+HG +++ + +LI Y K G ++
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 568 ANVFAKIPE-KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSY 626
+F+++ E +++VT+ +MI GY + + +AL L M G D+ + VLSA +
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 627 AGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKELGEEGNV 682
++ G+++ ++ E V DM + G++ A F + +
Sbjct: 632 VATLERGMEV-----HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 686
Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLE-MDTRNSMPGYHVLLSNI 728
W S++ HG E A KL E M P HV +
Sbjct: 687 --SWNSMISGYARHGQGE----EALKLFETMKLDGQTPPDHVTFVGV 727
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 38/408 (9%)
Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
D+++ ++ I Y E G ARK+FD RN W ++ GY +N EA+ +F++ +
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VFLRDM 93
Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDL--GQQLHAYIIKNFVALPVIVLNAVIE------ 373
+ I + F+S L A ++ + + G+Q+H + K A+ +V N +I
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 374 ---------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALL 418
++ VSWN++IS + Q G + MQ G T +L+
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 419 SAASNLRNQDVG--KQTHAYLLRHGI---HFEGMESYLIDMYAKSGLIKTARQIFEKNDS 473
+ A +L DV +Q + + G+ F G S L+ +AKSG + AR++F + ++
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG--SGLVSAFAKSGSLSYARKVFNQMET 271
Query: 474 GDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH-NVTP-NVVTIASVLPACNPMGNIEL 531
R+ T N ++ G + EEA F M +V+P + V + S P + + L
Sbjct: 272 --RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL 329
Query: 532 --GKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILG 588
G+++HG I L+D V +G L++MY+K G I A VF + +K+SV++ +MI G
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 589 YGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
Q+G A+ ++SM+ I P + T ++ LS+C+ G QI
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 59/418 (14%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
AR++F +T +V WN++I G N EA+ Y M++ ++T S L +C
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG--SFTLISSLSSC 425
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A + ++G+ +H ++ + + V N+L+ +Y+ E Y +
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA----------------ETGY--LN 467
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYV-EAVRQFRMMLRMGIRPSTISFVNVFPAL 236
K+F +M + V+WN+I+ ++ER + EAV F R G + + I+F +V A+
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 237 SSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEV 296
SSL + ++GL +K + ++ ++ I Y + G D KIF ER V
Sbjct: 528 SSLSFGELGKQIHGLALK--NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 297 -WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
WN+MI GY+ N +A++L +L+ + + D + + LSA + + L+ G ++HA
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQRL-DSFMYATVLSAFASVATLERGMEVHAC 644
Query: 356 IIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEG 395
++ + V+V +A+++ R+ SWN+MIS + ++G +E
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 396 LMLVYEMQKQGFM-IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGM-ESY 450
L L M+ G D VT +LSA S HA LL G HFE M +SY
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACS-----------HAGLLEEGFKHFESMSDSY 751
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
LD++V++ +LI+ Y ++G A VF ++P +N V++ ++ GY ++G + AL R
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVD--EGLQIFDLM 640
M GI + FV+VL AC G V G QI LM
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
GR A + F+++ + WN++I G+ + EA+ L+ MK T D+ T+
Sbjct: 668 GRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ-TPPDHVTFVG 726
Query: 113 VLKACAETRNLRIG 126
VL AC+ L G
Sbjct: 727 VLSACSHAGLLEEG 740
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 340/661 (51%), Gaps = 86/661 (13%)
Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
+Y+ ++ V ++ + ++++++ K + + +++ F M G+ P + N
Sbjct: 62 NYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPN 121
Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
+F + L +K ++ + G + D FV S MY G ARK+FD +
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDM--DAFVQGSMFHMYMRCGRMGDARKVFDRMSD 179
Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
++ + ++ Y + E + + L E++
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRI--------------------------LSEME---- 209
Query: 352 LHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDS 411
++ IE ++VSWN ++S F ++G E +++ ++ GF D
Sbjct: 210 -----------------SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 412 VTVTALLSAASNLRNQDVGKQTHAYLLRHGI----------------------------H 443
VTV+++L + + ++G+ H Y+++ G+
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 444 FEGMESYLIDMY----AKSGLIKTARQIFE--KNDSGDRDQATWNAMIAGYTQNGLLEEA 497
FE ME+ + + Y +++GL+ A ++FE K + + + +W ++IAG QNG EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
FR+M V PN VTI S+LPAC + + G+ HGF++R L NV VG++LIDM
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
Y+K G IN + VF +P KN V + +++ G+ HG ++ +S+F S+ ++PD I+F
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISF 492
Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
++LSAC GL DEG + F +M +EY I+P EHY C+ ++LGR GK+ EAY+ +KE+
Sbjct: 493 TSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
E + +WG+LL SCRL + +LAE+ A+KL ++ N PG +VLLSNIYA +G W
Sbjct: 553 FEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN--PGTYVLLSNIYAAKGMWTE 609
Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
VD +R +M GL+K GCSWI V V + D+ HPQ +I E ++ ++ EMR +G+
Sbjct: 610 VDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGH 669
Query: 798 K 798
+
Sbjct: 670 R 670
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 213/505 (42%), Gaps = 86/505 (17%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A + SI PT ++++I L ++I ++S+M D++ ++ K C
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIP--DSHVLPNLFKVC 126
Query: 118 AETRNLRIGKAVHCHFIRCFS--NPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD--- 172
AE ++GK +HC + C S + FV S+ +MY C DA V + + D
Sbjct: 127 AELSAFKVGKQIHC--VSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 173 -------YSK---YDLVCKVFDTMR----RRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
Y++ + V ++ M N+V+WN I+S + ++ + EAV F+ +
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAEL-- 276
+G P ++ +V P++ +++G ++K G + D V S+ I MY +
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG--LLKDKCVISAMIDMYGKSGH 302
Query: 277 -----------------------------GCFDFARKIF----DNCLERNTEVWNTMIGG 303
G D A ++F + +E N W ++I G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 304 YVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK----- 358
QN +EA+ELF + +++ + + VT S L A + L G+ H + ++
Sbjct: 363 CAQNGKDIEALELFRE-MQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 359 ---------------NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 403
+ L IV N + +++V WN++++ F +G E + + +
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 404 KQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLL-RHGIHFEGMESY--LIDMYAKSGL 460
+ D ++ T+LLSA + D G + + +GI +E Y ++++ ++G
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIK-PRLEHYSCMVNLLGRAGK 540
Query: 461 IKTARQIFEKNDSGDRDQATWNAMI 485
++ A + K + D W A++
Sbjct: 541 LQEAYDLI-KEMPFEPDSCVWGALL 564
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 48 KICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSC-D 106
K C E + ++ S V WN I+ GF + EA++++ +K C D
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF---QKIHHLGFCPD 251
Query: 107 NYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYS---------TCLS 157
T SSVL + ++ L +G+ +H + I+ + V +++++MY + +
Sbjct: 252 QVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN 311
Query: 158 SLDAEMVGL--KYVEVDYSKYDLVCK---VFDTMRRR----NVVAWNTIVSWYVKTERYV 208
+ G+ Y+ S+ LV K +F+ + + NVV+W +I++ + + +
Sbjct: 312 QFEMMEAGVCNAYI-TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
EA+ FR M G++P+ ++ ++ PA ++ +G V++ ++++ V S+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV--HLLDNVHVGSA 428
Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
I MYA+ G + ++ +F+ +N WN+++ G+ + E + +F ++ +
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR-TRLKP 487
Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQ 388
D ++F S LSA Q+ D G + + + + P + ++ M++ +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP----------RLEHYSCMVNLLGR 537
Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME 448
G E L+ EM F DS ALL++ N D+ + L G
Sbjct: 538 AGKLQEAYDLIKEMP---FEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDS 473
L ++YA G+ I K +S
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMES 619
Score = 33.1 bits (74), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 42/103 (40%)
Query: 534 QLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
Q H ++ + ++ LI YS N A V IP+ +++++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
+ +++ +F M G+ PD+ + C+ G QI
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQI 138
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 226/766 (29%), Positives = 390/766 (50%), Gaps = 93/766 (12%)
Query: 56 HLARQLFDSITRPTTVIWNTIIIGFVCN-NLPYEAILLYSQMKKSSPYTSCDNYTYSSVL 114
+A LF + W IIG C L A++ + +M ++ + DN+ +V
Sbjct: 124 EIAEVLFSKLRVRNVFSW-AAIIGVKCRIGLCEGALMGFVEMLENEIFP--DNFVVPNVC 180
Query: 115 KACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
KAC + R G+ VH + ++ FV +SL +MY C DA
Sbjct: 181 KACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDAS------------ 228
Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
KVFD + RN VAWN ++ YV+ + EA+R F M + G+ P+ ++
Sbjct: 229 ------KVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
A +++G + + + + G E D + +S + Y ++G ++A +FD E++
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMEL--DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDV 340
Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
WN +I GYVQ +AI + Q++ L+++ +D VT + +SA ++ + L LG+++
Sbjct: 341 VTWNLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQC 399
Query: 355 YIIKNFVALPVI--------------------VLNAVIERDVVSWNTMISAFVQNGLDDE 394
Y I++ ++ V ++ +E+D++ WNT+++A+ ++GL E
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGE 459
Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDM 454
L L Y MQ +G + +T ++ S LRN V + +L M+S
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLII--LSLLRNGQVDEAKDMFL--------QMQS----- 504
Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
SG+I + +W M+ G QNG EEA + R+M E + PN
Sbjct: 505 ---SGIIP--------------NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQN-VFVGTSLIDMYSKSGVINYAANVF-- 571
+I L AC + ++ +G+ +HG+ IR L + V + TSL+DMY+K G IN A VF
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 572 ---AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
+++P N+ MI Y +G + A++L+RS++G G++PD IT VLSAC++AG
Sbjct: 608 KLYSELPLSNA-----MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAG 662
Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
+++ ++IF + + ++P EHY + D+L G+ +A ++E+ + + I S
Sbjct: 663 DINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQ-S 721
Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
L+ SC +EL + +++KLLE + NS G +V +SN YA EG+W+ V K+R+ M+ +
Sbjct: 722 LVASCNKQRKTELVDYLSRKLLESEPENS--GNYVTISNAYAVEGSWDEVVKMREMMKAK 779
Query: 749 GLRKEVGCSWIDVGGY--VNRFASKDQEHPQSHKIYEMLERLAMEM 792
GL+K+ GCSWI + G V+ F + D+ H + ++I ML L +M
Sbjct: 780 GLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 264/525 (50%), Gaps = 29/525 (5%)
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
D + ++ ++K G Y + ++ + + YA+ + A +F RN W +
Sbjct: 85 DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN- 359
IG + A+ FV++LE +EI D+ + A L+ G+ +H Y++K+
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 360 -----FVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVY 400
FVA + V + + +R+ V+WN ++ +VQNG ++E + L
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSG 459
+M+KQG VTV+ LSA++N+ + GKQ+HA + +G+ + + + L++ Y K G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
LI+ A +F++ ++D TWN +I+GY Q GL+E+A + M + + VT+A++
Sbjct: 324 LIEYAEMVFDR--MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
+ A N++LGK++ + IR+ + ++ + ++++DMY+K G I A VF EK+
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
+ + T++ Y + G+S AL LF M+ G+ P+ IT+ ++ + G VDE +F L
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-L 500
Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG---NVLEIWGSLLGSCRLH 696
Q I P+ + + + + + G EA F++++ E G N I + L +C
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVA-LSACAHL 559
Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKV 741
+ + ++ +S+ L ++YA+ G+ +KV
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 159 bits (403), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 36/376 (9%)
Query: 344 QELDLGQQLHAYIIKN--------FVALPVIVLNAVIE--------------RDVVSWNT 381
++L G+Q+HA I+KN ++ +++ A + R+V SW
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
+I + GL + LM EM + D+ V + A L+ G+ H Y+++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
+ + S L DMY K G++ A ++F+ + DR+ WNA++ GY QNG EEA
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFD--EIPDRNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
F M + V P VT+++ L A MG +E GKQ H +I ++ + +GTSL++ Y K
Sbjct: 262 FSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCK 321
Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
G+I YA VF ++ EK+ VT+ +I GY Q G+ E A+ + + M+ ++ D +T +
Sbjct: 322 VGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATL 381
Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVA----DMLGRVGKVVEAYEFVKEL 676
+SA + + G ++ Q Y I+ S E +A DM + G +V+A +
Sbjct: 382 MSAAARTENLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 677 GEEGNVLEIWGSLLGS 692
E+ +L W +LL +
Sbjct: 437 VEKDLIL--WNTLLAA 450
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 5/256 (1%)
Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
+S+ +NG E L LV EM + I +L R+ GKQ HA +L++G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 443 HF---EGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFV 499
+ E +E+ L+ YAK ++ A +F K R+ +W A+I + GL E A +
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRV--RNVFSWAAIIGVKCRIGLCEGALM 159
Query: 500 AFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYS 559
F +MLE+ + P+ + +V AC + G+ +HG+ ++ L+ VFV +SL DMY
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYG 219
Query: 560 KSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVA 619
K GV++ A+ VF +IP++N+V + +++GY Q+G +E A+ LF M+ G+EP +T
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 620 VLSACSYAGLVDEGLQ 635
LSA + G V+EG Q
Sbjct: 280 CLSASANMGGVEEGKQ 295
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 195/450 (43%), Gaps = 77/450 (17%)
Query: 44 SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
S L+ C+ G A +FD + V WN II G+V L +AI + M+
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
C T ++++ A A T NL++GK V C+ IR + +++++MY+ C S +DA+
Sbjct: 374 DC--VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK- 430
Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR 223
KVFD+ ++++ WNT+++ Y ++ EA+R F M G+
Sbjct: 431 -----------------KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVP 473
Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFAR 283
P+ I++ + +L G A ++ L + SS I
Sbjct: 474 PNVITWNLIILSLLRNGQVDEAKDMF-------------LQMQSSGII------------ 508
Query: 284 KIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQL 343
N W TM+ G VQN EAI LF++ ++ + + + ALSA + L
Sbjct: 509 --------PNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 344 QELDLGQQLHAYIIKNFVALPVI---------------------VLNAVIERDVVSWNTM 382
L +G+ +H YII+N ++ V + + ++ N M
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM 619
Query: 383 ISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI 442
ISA+ G E + L ++ G D++T+T +LSA ++ + + + ++
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679
Query: 443 HFEGMESY--LIDMYAKSGLIKTARQIFEK 470
+E Y ++D+ A +G + A ++ E+
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEE 709
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 218/692 (31%), Positives = 357/692 (51%), Gaps = 54/692 (7%)
Query: 129 VHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRR 188
HC+ I+C S +V N +L+ Y +K+ + Y+ +FD M +
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSY-------------IKFGFLGYANM-----LFDEMPK 63
Query: 189 RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVV 248
R+ V+WNT++S Y + +A F M R G SF + ++S+ + + V
Sbjct: 64 RDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQV 123
Query: 249 YGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNN 308
+GL++K G Y +++V SS + MYA+ + A + F E N+ WN +I G+VQ
Sbjct: 124 HGLVIKGG--YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVR 181
Query: 309 HPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVL 368
A L + + D TF L+ + +L +Q+HA ++K + + +
Sbjct: 182 DIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITIC 241
Query: 369 NAVIE---------------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
NA+I +D++SWN+MI+ F ++ L + L +MQ+
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESYLIDMYAK--SGLIKTA 464
D T T LLSA S +Q GK H +++ G+ + LI MY + +G ++ A
Sbjct: 302 ETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDA 361
Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACN 524
+FE S +D +WN++I G+ Q GL E+A F + + + +++L +C+
Sbjct: 362 LSLFESLKS--KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419
Query: 525 PMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS-VTYT 583
+ ++LG+Q+H + + N FV +SLI MYSK G+I A F +I K+S V +
Sbjct: 420 DLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
MILGY QHG+ + +L LF M ++ D +TF A+L+ACS+ GL+ EGL++ +LM+
Sbjct: 480 AMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPV 539
Query: 644 YKIQPSTEHYCCVADMLGRVGKVVEAYEFVKE--LGEEGNVLEIWGSLLGSCRLHGHSEL 701
YKIQP EHY D+LGR G V +A E ++ L + VL+ + LG CR G E+
Sbjct: 540 YKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLK---TFLGVCRACGEIEM 596
Query: 702 AEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDV 761
A VA LLE++ + +V LS++Y++ WE V+K M+ERG++K G SWI++
Sbjct: 597 ATQVANHLLEIEPEDHFT--YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Query: 762 GGYVNRFASKDQEHPQSHKIYEMLERLAMEMR 793
V F ++D+ +P IY M++ L EM+
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 193 bits (490), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 261/547 (47%), Gaps = 56/547 (10%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A LFD + + +V WNT+I G+ +A L++ MK+S + D Y++S +LK
Sbjct: 54 ANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSG--SDVDGYSFSRLLKGI 111
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A + +G+ VH I+ + +V +SL++MY+ C DA
Sbjct: 112 ASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDA---------------- 155
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVF-PAL 236
+ F + N V+WN +++ +V+ A F ++ M ++ + F P L
Sbjct: 156 --FEAFKEISEPNSVSWNALIAGFVQVRDIKTA---FWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 237 SSLGDYKSADV---VYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNC-LER 292
+ L D ++ V+ ++KLG ++ ++ + ++ I YA+ G A+++FD +
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQH--EITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ WN+MI G+ ++ A ELF+Q ++ + D T+ LSA S + G+ L
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQ-MQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 353 HAYIIKNFVALPVIVLNAVI----------------------ERDVVSWNTMISAFVQNG 390
H +IK + NA+I +D++SWN++I+ F Q G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-IHFEGMES 449
L ++ + ++ +D +ALL + S+L +G+Q HA + G + E + S
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 450 YLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNV 509
LI MY+K G+I++AR+ F++ S WNAMI GY Q+GL + + F QM NV
Sbjct: 448 SLIVMYSKCGIIESARKCFQQI-SSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 510 TPNVVTIASVLPACNPMGNIELGKQLHGF-SIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
+ VT ++L AC+ G I+ G +L Y + + + +D+ ++G++N A
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 569 NVFAKIP 575
+ +P
Sbjct: 567 ELIESMP 573
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 341 bits (874), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/558 (34%), Positives = 310/558 (55%), Gaps = 29/558 (5%)
Query: 264 FVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLEL 323
F+A+ I MY++L + AR + RN W ++I G QN H A+ F + +
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRR 101
Query: 324 DEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIV---------------- 367
+ +V +D TF A AV+ L+ G+Q+HA +K L V V
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 368 ----LNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
+ + ER++ +WN IS V +G E + E ++ +S+T A L+A S+
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 424 LRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWN 482
+ ++G Q H +LR G + + + LID Y K I+++ IF + G ++ +W
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF--TEMGTKNAVSWC 279
Query: 483 AMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY 542
+++A Y QN E+A V + + + V + I+SVL AC M +ELG+ +H +++
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 543 LLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLF 602
+++ +FVG++L+DMY K G I + F ++PEKN VT ++I GY G + AL+LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 603 RSM--KGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADML 660
M +GCG P+ +TFV++LSACS AG V+ G++IFD M+ Y I+P EHY C+ DML
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 661 GRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPG 720
GR G V AYEF+K++ + + +WG+L +CR+HG +L + A+ L ++D ++S G
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTI-SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS--G 516
Query: 721 YHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHK 780
HVLLSN +A G W + VR+E++ G++K G SWI V V+ F +KD+ H + +
Sbjct: 517 NHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKE 576
Query: 781 IYEMLERLAMEMRNAGNK 798
I L +L EM AG K
Sbjct: 577 IQTTLAKLRNEMEAAGYK 594
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 243/497 (48%), Gaps = 54/497 (10%)
Query: 113 VLKACAETRNLRIGKAVHCHFIRCF-SNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
+LK ++R+G+ VH ++ S P F+ N L+NMYS A +V L+
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV-LRLTPA 70
Query: 172 DYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVN 231
RNVV+W +++S + + A+ +F M R G+ P+ +F
Sbjct: 71 -----------------RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPC 113
Query: 232 VFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLE 291
F A++SL + ++ L VK G + D+FV SA MY + D ARK+FD E
Sbjct: 114 AFKAVASLRLPVTGKQIHALAVKCGR--ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 171
Query: 292 RNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQ 351
RN E WN I V + P EAIE F++ +D + +TF + L+A S L+LG Q
Sbjct: 172 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQ 230
Query: 352 LHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGL 391
LH ++++ V V N +I+ ++ VSW ++++A+VQN
Sbjct: 231 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 290
Query: 392 DDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH---FEGME 448
D++ +L +K ++++LSA + + ++G+ HA+ ++ + F G
Sbjct: 291 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG-- 348
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
S L+DMY K G I+ + Q F+ + +++ T N++I GY G ++ A F +M
Sbjct: 349 SALVDMYGKCGCIEDSEQAFD--EMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 509 V--TPNVVTIASVLPACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVI 564
TPN +T S+L AC+ G +E G ++ S+R Y ++ + ++DM ++G++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 565 NYAANVFAKIPEKNSVT 581
A K+P + +++
Sbjct: 466 ERAYEFIKKMPIQPTIS 482
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 197/465 (42%), Gaps = 53/465 (11%)
Query: 31 SPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAI 90
SPP P L I + SK+ P AR + V W ++I G N A+
Sbjct: 38 SPPPPFLANYLI-NMYSKL---DHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTAL 93
Query: 91 LLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLN 150
+ + +M++ +++T+ KA A R GK +H ++C FV S +
Sbjct: 94 VEFFEMRREGVVP--NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFD 151
Query: 151 MYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEA 210
MY DA K+FD + RN+ WN +S V R EA
Sbjct: 152 MYCKTRLRDDAR------------------KLFDEIPERNLETWNAFISNSVTDGRPREA 193
Query: 211 VRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAI 270
+ F R+ P++I+F A S ++GL+++ G + D+ V + I
Sbjct: 194 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG--FDTDVSVCNGLI 251
Query: 271 FMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDD 330
Y + + IF +N W +++ YVQN+ +A L+++ + D + D
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRK-DIVETSD 310
Query: 331 VTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI------------------ 372
S LSA + + L+LG+ +HA+ +K V + V +A++
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 373 --ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF--MIDSVTVTALLSAASNLRNQD 428
E+++V+ N++I + G D L L EM +G + +T +LLSA S +
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 429 VGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTARQIFEK 470
G + + +GI G E Y ++DM ++G+++ A + +K
Sbjct: 431 NGMKIFDSMRSTYGIE-PGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 143/334 (42%), Gaps = 24/334 (7%)
Query: 21 PPQLPQIHSLSPPIPKLKTPTIR-SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIG 79
P QIH+L+ ++ + S C+ AR+LFD I WN I
Sbjct: 124 PVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN 183
Query: 80 FVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSN 139
V + P EAI + + ++ + ++ T+ + L AC++ +L +G +H +R +
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 140 PSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVS 199
V N L++ Y C +E+ +F M +N V+W ++V+
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEI------------------IFTEMGTKNAVSWCSLVA 283
Query: 200 WYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEY 259
YV+ +A + + + S +V A + + + ++ VK E
Sbjct: 284 AYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 260 VNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQ 319
+FV S+ + MY + GC + + + FD E+N N++IGGY A+ LF +
Sbjct: 344 T--IFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 320 VLELD-EIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ + +TF+S LSA S+ ++ G ++
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 339 bits (869), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 220/794 (27%), Positives = 397/794 (50%), Gaps = 84/794 (10%)
Query: 59 RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMK-KSSPYTSCDNYTYSSVLKAC 117
+++F + V+WN ++ G + E + + M P S + T++ VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPS--SVTFAIVLPLC 132
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ GK++H + I+ V N+L++MY+ K+ + Y
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYA-------------KFGFIFPDAY- 178
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
FD + ++VV+WN I++ + + +A R F +ML+ P+ + NV P +
Sbjct: 179 ---TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 238 SLGD---YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
S+ +S ++ +V+ S +FV +S + Y +G + A +F ++
Sbjct: 236 SMDKNIACRSGRQIHSYVVQR-SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294
Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
WN +I GY N +A +LF ++ ++ D VT +S L +QL +L G+++H+
Sbjct: 295 VSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 355 YIIKN-FVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDD 393
YI+++ ++ V NA+I +D++SWN ++ AF +
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414
Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME----S 449
+ L L++ + + +DSVT+ +LL N++ K+ H Y ++ G+ + E +
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN 474
Query: 450 YLIDMYAKSGLIKTARQIF----EKN-------------DSGDRDQA------------- 479
L+D YAK G ++ A +IF E+ +SG D A
Sbjct: 475 ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLT 534
Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
TW+ M+ Y ++ EA FR++ + PN VTI ++LP C + ++ L +Q HG+
Sbjct: 535 TWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594
Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
IR L GT L+D+Y+K G + +A +VF ++ V +T M+ GY HG + AL
Sbjct: 595 IRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653
Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADM 659
++ M I+PD + +L+AC +AGL+ +GLQI+D ++ + ++P+ E Y C D+
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDL 713
Query: 660 LGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMP 719
+ R G++ +AY FV ++ E N IWG+LL +C + +L VA LL+ ++ ++
Sbjct: 714 IARGGRLDDAYSFVTQMPVEPNA-NIWGTLLRACTTYNRMDLGHSVANHLLQAESDDT-- 770
Query: 720 GYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSH 779
G HVL+SN+YA + WE V ++R M+++ ++K GCSW++V G N F S D HP+
Sbjct: 771 GNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRD 830
Query: 780 KIYEMLERLAMEMR 793
I++++ L ++M+
Sbjct: 831 SIFDLVNALYLQMK 844
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 248/533 (46%), Gaps = 57/533 (10%)
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
D+ + V+KACA +L G+A+H + V S+LNMY+ C D +
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ--- 76
Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY-VKTERYVEAVRQFRMM-LRMGIR 223
K+F M + V WN +++ V R E +R F+ M +
Sbjct: 77 ---------------KMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPK 119
Query: 224 PSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELG-CFDFA 282
PS+++F V P LGD + ++ ++K G E D V ++ + MYA+ G F A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLE--KDTLVGNALVSMYAKFGFIFPDA 177
Query: 283 RKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL-ELDEIVFDDVT-FLSALSAV 340
FD +++ WN +I G+ +NN +A F +L E E + + L +++
Sbjct: 178 YTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASM 237
Query: 341 SQLQELDLGQQLHAYII-KNFVALPVIVLNAVI--------------------ERDVVSW 379
+ G+Q+H+Y++ ++++ V V N+++ +D+VSW
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMI-DSVTVTALLSAASNLRNQDVGKQTHAYLL 438
N +I+ + N + L + + +G + DSVT+ ++L + L + GK+ H+Y+L
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 439 RHGIHFE--GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEE 496
RH E + + LI YA+ G A F + +D +WNA++ + + +
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST--KDIISWNAILDAFADSPKQFQ 415
Query: 497 AFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL---DQNVFVGTS 553
+L +T + VTI S+L C + I K++HG+S++ L ++ +G +
Sbjct: 416 FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 554 LIDMYSKSGVINYAANVFAKIPEKNS-VTYTTMILGYGQHGMSERALSLFRSM 605
L+D Y+K G + YA +F + E+ + V+Y +++ GY G + A LF M
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 336 bits (862), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 227/774 (29%), Positives = 384/774 (49%), Gaps = 59/774 (7%)
Query: 58 ARQLFDSITRPTT-------VIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
A Q+FD ++ + +WN++I G+ E + + +M D ++
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFG--VRPDAFSL 171
Query: 111 SSVLKACAETRNLRI--GKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKY 168
S V+ + N R GK +H +R + F+ +L++MY S+DA V +
Sbjct: 172 SIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRV---F 228
Query: 169 VEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTIS 228
VE++ + NVV WN ++ + + ++ + + ++ + S
Sbjct: 229 VEIE--------------DKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTS 274
Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
F A S + ++ +VK+G ND +V +S + MY++ G A +F
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLH--NDPYVCTSLLSMYSKCGMVGEAETVFSC 332
Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
+++ E+WN M+ Y +N++ A++LF + ++ D T + +S S L +
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLF-GFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 349 GQQLHAYIIKNFV--------AL------------PVIVLNAVIERDVVSWNTMISAFVQ 388
G+ +HA + K + AL +V ++ E+D+V+W ++IS +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 389 NGLDDEGLMLVYEMQKQ--GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE- 445
NG E L + +M+ DS +T++ +A + L G Q H +++ G+
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 446 GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
+ S LID+Y+K GL + A ++F + + WN+MI+ Y++N L E + F ML
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMST--ENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVIN 565
+ P+ V+I SVL A + ++ GK LHG+++R + + + +LIDMY K G
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 566 YAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
YA N+F K+ K+ +T+ MI GYG HG ALSLF MK G PD +TF++++SAC+
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 626 YAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEI 685
++G V+EG IF+ M+Q+Y I+P+ EHY + D+LGR G + EAY F+K + E + I
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS-SI 748
Query: 686 WGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEM 745
W LL + R H + EL + A+KLL M+ +V L N+Y E G K+ M
Sbjct: 749 WLCLLSASRTHHNVELGILSAEKLLRMEPERGST--YVQLINLYMEAGLKNEAAKLLGLM 806
Query: 746 RERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGNKT 799
+E+GL K+ GCSWI+V N F S P +I+ +L RL M + T
Sbjct: 807 KEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDEDKAT 860
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 164/599 (27%), Positives = 288/599 (48%), Gaps = 48/599 (8%)
Query: 56 HLARQLF---DSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
H+ R L DS P ++ N+ I + +A+ LYS+ SSP+ + +T+ S
Sbjct: 9 HIRRGLCCVADSYISPASI--NSGIRALIQKGEYLQALHLYSKHDGSSPFWT-SVFTFPS 65
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
+LKAC+ NL GK +H + F+ SL+NMY C +++
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKC-----------GFLDYA 114
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
+D + + R+V WN+++ Y K R+ E V FR ML G+RP S V
Sbjct: 115 VQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV 174
Query: 233 FPALSSLGDYK--SADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
+ G+++ ++G +++ + D F+ ++ I MY + G A ++F
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLR--NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIE 232
Query: 291 ER-NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLG 349
++ N +WN MI G+ + +++L++ + + + + +F AL A SQ + G
Sbjct: 233 DKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFG 291
Query: 350 QQLHAYIIK--------------------NFVALPVIVLNAVIERDVVSWNTMISAFVQN 389
+Q+H ++K V V + V+++ + WN M++A+ +N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-ME 448
L L M+++ + DS T++ ++S S L + GK HA L + I +E
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
S L+ +Y+K G A +F+ + ++D W ++I+G +NG +EA F M + +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSME--EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 509 --VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
+ P+ + SV AC + + G Q+HG I+ L NVFVG+SLID+YSK G+
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
Query: 567 AANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACS 625
A VF + +N V + +MI Y ++ + E ++ LF M GI PD+++ +VL A S
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 244/563 (43%), Gaps = 94/563 (16%)
Query: 44 SRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYT 103
S LS + G A +F + IWN ++ + N+ Y A+ L+ M++ S
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 104 SCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEM 163
D++T S+V+ C+ GK+VH + + + ++LL +YS C DA +
Sbjct: 372 --DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 164 VGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML--RMG 221
VF +M +++VAW +++S K ++ EA++ F M
Sbjct: 430 ------------------VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 222 IRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDF 281
++P + +V A + L + V+G ++K G V ++FV SS I +Y++ G +
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG--LVLNVFVGSSLIDLYSKCGLPEM 529
Query: 282 ARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF-DDVTFLSALSAV 340
A K+F + N WN+MI Y +NN P +I+LF L L + +F D V+ S L A+
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF--NLMLSQGIFPDSVSITSVLVAI 587
Query: 341 SQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSWN 380
S L G+ LH Y ++ + + NA+I+ + +++WN
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
MI + +G L L EM+K G D VT +L+SA ++
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNH----------------- 690
Query: 441 GIHFEGMESYLIDMYAKSGLIKTARQIFE--KNDSG-DRDQATWNAMIAGYTQNGLLEEA 497
SG ++ + IFE K D G + + + M+ + GLLEEA
Sbjct: 691 -----------------SGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEA 733
Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS---L 554
+ + M + + +L A N+ELG S LL G++ L
Sbjct: 734 YSFIKAM---PIEADSSIWLCLLSASRTHHNVELGI----LSAEKLLRMEPERGSTYVQL 786
Query: 555 IDMYSKSGVINYAANVFAKIPEK 577
I++Y ++G+ N AA + + EK
Sbjct: 787 INLYMEAGLKNEAAKLLGLMKEK 809
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 11/188 (5%)
Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
+V T S+L AC+ + N+ GK +HG + + F+ TSL++MY K G ++YA VF
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 572 -------AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
+ + ++ + +MI GY + + + FR M G+ PDA + V+S
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 625 SYAGLV--DEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
G +EG QI M + + + + DM + G ++A+ E+ ++ NV
Sbjct: 179 CKEGNFRREEGKQIHGFMLRN-SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNV 237
Query: 683 LEIWGSLL 690
+ +W ++
Sbjct: 238 V-LWNVMI 244
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/630 (29%), Positives = 344/630 (54%), Gaps = 37/630 (5%)
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
++FD M + + WN ++ + Y+EAV+ + M+ G++ T ++ V +++ +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
+ ++ +++KLG +V+D++V +S I +Y +LGC A K+F+ ER+ WN+M
Sbjct: 145 SLEEGKKIHAMVIKLG--FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
I GY+ ++ LF ++L+ D + +SAL A S + +G+++H + +++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 361 VALPVI---------------------VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLV 399
+ + + N +I+R++V+WN MI + +NG + +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 400 YEMQKQ-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI--HFEGMESYLIDMYA 456
+M +Q G D +T LL A++ L G+ H Y +R G H +E+ LIDMY
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMV-LETALIDMYG 376
Query: 457 KSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTI 516
+ G +K+A IF++ +++ +WN++IA Y QNG A F+++ + ++ P+ TI
Sbjct: 377 ECGQLKSAEVIFDR--MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
AS+LPA ++ G+++H + ++ N + SL+ MY+ G + A F I
Sbjct: 435 ASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
K+ V++ ++I+ Y HG ++ LF M + P+ TF ++L+ACS +G+VDEG +
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554
Query: 637 FDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLH 696
F+ M++EY I P EHY C+ D++GR G A F++E+ IWGSLL + R H
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA-RIWGSLLNASRNH 613
Query: 697 GHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGC 756
+AE A+++ +M+ N+ G +VLL N+YAE G WE+V++++ M +G+ +
Sbjct: 614 KDITIAEFAAEQIFKMEHDNT--GCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671
Query: 757 SWIDVGGYVNRFASKDQEHPQSHKIYEMLE 786
S ++ G + F + D+ H ++KIYE+L+
Sbjct: 672 STVEAKGKSHVFTNGDRSHVATNKIYEVLD 701
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 259/541 (47%), Gaps = 51/541 (9%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A QLFD + + +WN +I GF L EA+ YS+M + D +TY V+K+
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG--VKADTFTYPFVIKSV 140
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A +L GK +H I+ +V NSL+++Y + DAE
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE--------------- 185
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
KVF+ M R++V+WN+++S Y+ ++ F+ ML+ G +P S ++ A S
Sbjct: 186 ---KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
+ K ++ V+ E D+ V +S + MY++ G +A +IF+ ++RN W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIE-TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAW 301
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
N MIG Y +N +A F ++ E + + D +T ++ L A + L+ G+ +H Y +
Sbjct: 302 NVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAM 357
Query: 358 KNFVALPVIVLNAVI---------------------ERDVVSWNTMISAFVQNGLDDEGL 396
+ LP +VL + E++V+SWN++I+A+VQNG + L
Sbjct: 358 RRGF-LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMY 455
L E+ + DS T+ ++L A + + G++ HAY+++ + + L+ MY
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVT 515
A G ++ AR+ F N +D +WN++I Y +G + F +M+ V PN T
Sbjct: 477 AMCGDLEDARKCF--NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 516 IASVLPACNPMGNIELGKQ-LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
AS+L AC+ G ++ G + Y +D + ++D+ ++G + A ++
Sbjct: 535 FASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Query: 575 P 575
P
Sbjct: 595 P 595
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 209/393 (53%), Gaps = 30/393 (7%)
Query: 267 SSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEI 326
+ A+ +A+ + A ++FD + + +WN MI G+ +EA++ + +++ +
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV-FAGV 126
Query: 327 VFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI-------------- 372
D T+ + +V+ + L+ G+++HA +IK V V N++I
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 373 ------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
ERD+VSWN+MIS ++ G LML EM K GF D + + L A S++ +
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 427 QDVGKQTHAYLLRHGIHFEG--MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
+GK+ H + +R I + + ++DMY+K G + A +IF N R+ WN M
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF--NGMIQRNIVAWNVM 304
Query: 485 IAGYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYL 543
I Y +NG + +AF+ F++M E N + P+V+T ++LPA I G+ +HG+++R
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRG 360
Query: 544 LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFR 603
++ + T+LIDMY + G + A +F ++ EKN +++ ++I Y Q+G + AL LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 604 SMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
+ + PD+ T ++L A + + + EG +I
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G+ A +FD + + WN+II +V N Y A+ L+ ++ SS D+ T +S
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP--DSTTIAS 436
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
+L A AE+ +L G+ +H + ++ + + NSL++MY+ C DA
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDAR---------- 486
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
K F+ + ++VV+WN+I+ Y +V F M+ + P+ +F ++
Sbjct: 487 --------KCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASL 538
Query: 233 FPALSSLG 240
A S G
Sbjct: 539 LAACSISG 546
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 334 bits (856), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 225/760 (29%), Positives = 385/760 (50%), Gaps = 64/760 (8%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A+ F++I + + V T +G L Y + Q K T+ D+ Y + +
Sbjct: 7 AKTFFNNIAQDSLVTLITKRVG-----LGYRFLSSLCQPKN----TALDSEGYKILFQTA 57
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
A++ ++ +GK H H I+ NP ++ N+LLNMY C E+ +++
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCR-------------ELGFAR-- 102
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
++FD M RN++++N+++S Y + Y +A+ F ++ ++
Sbjct: 103 ---QLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
D ++++GL+V G +F+ + I MY++ G D A +FD C ER+ W
Sbjct: 160 ERCDLDLGELLHGLVVVNG--LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS-QLQE--LDLGQQLHA 354
N++I GYV+ E + L + + D + S L A L E ++ G +H
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAK-MHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 355 YIIKNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQ-----N 389
Y K + ++V A+++ ++VV++N MIS F+Q +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 390 GLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHF-EGME 448
E L +MQ++G T + +L A S + + G+Q HA + ++ E +
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
S LI++YA G + Q F + +D A+W +MI + QN LE AF FRQ+ +
Sbjct: 397 SALIELYALMGSTEDGMQCFAS--TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
+ P T++ ++ AC + G+Q+ G++I+ +D V TS I MY+KSG + A
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLAN 514
Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
VF ++ + TY+ MI QHG + AL++F SMK GI+P+ F+ VL AC + G
Sbjct: 515 QVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
LV +GL+ F M+ +Y+I P+ +H+ C+ D+LGR G++ +A + G + + + W +
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV-TWRA 633
Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
LL SCR++ S + + VA++L+E++ S G +VLL NIY + G + ++VR+ MR+R
Sbjct: 634 LLSSCRVYKDSVIGKRVAERLMELEPEAS--GSYVLLHNIYNDSGVNSSAEEVRELMRDR 691
Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERL 788
G++KE SWI +G + FA D HP S IY MLE +
Sbjct: 692 GVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 251/551 (45%), Gaps = 55/551 (9%)
Query: 50 CQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYT 109
C+ ARQLFD + + +N++I G+ +A+ L+ + ++++ D +T
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN--LKLDKFT 150
Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
Y+ L C E +L +G+ +H + + F+ N L++MYS C
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC-------------- 196
Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISF 229
K D +FD R+ V+WN+++S YV+ E + M R G+ +T +
Sbjct: 197 ----GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYAL 252
Query: 230 VNVFPALS---SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF 286
+V A + G + ++ KLG E+ D+ V ++ + MYA+ G A K+F
Sbjct: 253 GSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF--DIVVRTALLDMYAKNGSLKEAIKLF 310
Query: 287 DNCLERNTEVWNTMIGGYVQ-----NNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVS 341
+N +N MI G++Q + EA +LF+ ++ + TF L A S
Sbjct: 311 SLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMD-MQRRGLEPSPSTFSVVLKACS 369
Query: 342 QLQELDLGQQLHAYIIKN------FVALPVIVLNAVI--------------ERDVVSWNT 381
+ L+ G+Q+HA I KN F+ +I L A++ ++D+ SW +
Sbjct: 370 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 429
Query: 382 MISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG 441
MI VQN + L ++ + TV+ ++SA ++ G+Q Y ++ G
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 442 IH-FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
I F +++ I MYAKSG + A Q+F + + D AT++AMI+ Q+G EA
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVF--IEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 501 FRQMLEHNVTPNVVTIASVLPACNPMGNIELG-KQLHGFSIRYLLDQNVFVGTSLIDMYS 559
F M H + PN VL AC G + G K Y ++ N T L+D+
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLG 607
Query: 560 KSGVINYAANV 570
++G ++ A N+
Sbjct: 608 RTGRLSDAENL 618
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 348/657 (52%), Gaps = 60/657 (9%)
Query: 194 WNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLV 253
+N+++ Y + EA+ F M+ GI P +F A + + ++GL+V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 254 KLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEA 313
K+G Y DLFV +S + YAE G D ARK+FD ERN W +MI GY + + +A
Sbjct: 162 KMG--YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 314 IELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE 373
++LF +++ +E+ + VT + +SA ++L++L+ G++++A+I + + + ++++A+++
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 374 R-------DVVS-------------WNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVT 413
DV N M S +V+ GL E L + M G D ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIH-FEGMESYLIDMYAKSGLIKTARQIFEKND 472
+ + +S+ S LRN GK H Y+LR+G ++ + + LIDMY K TA +IF++
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR-- 397
Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN------------------------ 508
++ TWN+++AGY +NG ++ A+ F M E N
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 509 --------VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSK 560
V + VT+ S+ AC +G ++L K ++ + + + +V +GT+L+DM+S+
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 561 SGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAV 620
G A ++F + ++ +T I G +ERA+ LF M G++PD + FV
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 621 LSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEG 680
L+ACS+ GLV +G +IF M + + + P HY C+ D+LGR G + EA + ++++ E
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 681 NVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDK 740
N + IW SLL +CR+ G+ E+A A+K+ + + G +VLLSN+YA G W ++ K
Sbjct: 638 NDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERT--GSYVLLSNVYASAGRWNDMAK 694
Query: 741 VRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
VR M+E+GLRK G S I + G + F S D+ HP+ I ML+ ++ + G+
Sbjct: 695 VRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 170/624 (27%), Positives = 293/624 (46%), Gaps = 97/624 (15%)
Query: 41 TIRSRLSKICQEGRPH---LARQLFD-SITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
TI +++ C+ G A+++F+ S + T ++N++I G+ + L EAILL+ +M
Sbjct: 66 TITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRM 125
Query: 97 KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
S S D YT+ L ACA++R G +H ++ FV NSL++ Y+ C
Sbjct: 126 MNSG--ISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC- 182
Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQ-FR 215
E+D ++ KVFD M RNVV+W +++ Y + + +AV FR
Sbjct: 183 ------------GELDSAR-----KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFR 225
Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
M+ + P++++ V V A + L D ++ + VY + G E VNDL V S+ + MY +
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE-VNDLMV-SALVDMYMK 283
Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
D A+++FD N ++ N M YV+ EA+ +F +++ + D ++ LS
Sbjct: 284 CNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMD-SGVRPDRISMLS 342
Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI----------------------- 372
A+S+ SQL+ + G+ H Y+++N + NA+I
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 373 ----------------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 404
E+++VSWNT+IS VQ L +E + + MQ
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 405 Q-GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIK 462
Q G D VT+ ++ SA +L D+ K + Y+ ++GI + + + L+DM+++ G +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 463 TARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPA 522
+A IF N +RD + W A I G E A F M+E + P+ V L A
Sbjct: 523 SAMSIF--NSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 523 CNPMGNIELGKQ-------LHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP 575
C+ G ++ GK+ LHG S ++V G ++D+ ++G++ A + +P
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVS-----PEDVHYGC-MVDLLGRAGLLEEAVQLIEDMP 634
Query: 576 -EKNSVTYTTMILGYGQHGMSERA 598
E N V + +++ G E A
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMA 658
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 138/570 (24%), Positives = 241/570 (42%), Gaps = 77/570 (13%)
Query: 26 QIHSLSPPIPKLKTPTIRSRLSKICQE-GRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
QIH L + K +++ L E G AR++FD ++ V W ++I G+ +
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 85 LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFV 144
+A+ L+ +M + T ++ T V+ ACA+ +L G+ V+ + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTP-NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 145 YNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKT 204
++L++MY C + D+ ++FD N+ N + S YV+
Sbjct: 274 VSALVDMYMKC------------------NAIDVAKRLFDEYGASNLDLCNAMASNYVRQ 315
Query: 205 ERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLF 264
EA+ F +M+ G+RP IS ++ + S L + +G +++ G E +++
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 265 VASSAIFM-----------------------------YAELGCFDFARKIFDNCLERNTE 295
A ++M Y E G D A + F+ E+N
Sbjct: 376 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
WNT+I G VQ + EAIE+F + + + D VT +S SA L LDL + ++ Y
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 356 IIKNFVALPV--------------------IVLNAVIERDVVSWNTMISAFVQNGLDDEG 395
I KN + L V + N++ RDV +W I A G +
Sbjct: 496 IEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 396 LMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGME-SYLID 453
+ L +M +QG D V L+A S+ GK+ +L+ HG+ E + ++D
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFR--QMLEHNVTP 511
+ ++GL++ A Q+ E D WN+++A G +E A A Q+L T
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPND-VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTG 674
Query: 512 NVVTIASVLPAC---NPMGNIELGKQLHGF 538
+ V +++V + N M + L + G
Sbjct: 675 SYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 332 bits (852), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 339/648 (52%), Gaps = 62/648 (9%)
Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
++ WN +S Y++T R EA+R F+ M R S++S+ + G+++ A ++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLF 118
Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
+ + DL + I Y AR++F+ ER+ WNTM+ GY QN
Sbjct: 119 DEMPE------RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-------------LDLGQQLHAYI 356
+A +F ++ E +++ ++ LSA S+++E + L ++
Sbjct: 173 VDDARSVFDRMPEKNDVSWN--ALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 357 IKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
K + +++ RDVVSWNT+I+ + Q+G DE L E Q D T TA
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTA 286
Query: 417 LLSAASNLRNQDVGKQ-----------THAYLLRHGIHFEGME----------------- 448
++S R + ++ + +L + E ME
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
+ +I YA+ G I A+ +F+K RD +W AMIAGY+Q+G EA F QM
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPK--RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAA 568
N + +S L C + +ELGKQLHG ++ + FVG +L+ MY K G I A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 569 NVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAG 628
++F ++ K+ V++ TMI GY +HG E AL F SMK G++PD T VAVLSACS+ G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 629 LVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGS 688
LVD+G Q F M Q+Y + P+++HY C+ D+LGR G + +A+ +K + E + IWG+
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA-AIWGT 583
Query: 689 LLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRER 748
LLG+ R+HG++ELAE A K+ M+ NS G +VLLSN+YA G W +V K+R MR++
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENS--GMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 749 GLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
G++K G SWI++ + F+ D+ HP+ +I+ LE L + M+ AG
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 232/527 (44%), Gaps = 76/527 (14%)
Query: 34 IPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLY 93
+P+ + + +S + G LAR+LFD + V WN +I G+V N +A L+
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF 149
Query: 94 SQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMY- 152
M + D +++++L A+ + ++V F R + +N+LL+ Y
Sbjct: 150 EIMPER------DVCSWNTMLSGYAQNGCVDDARSV---FDR-MPEKNDVSWNALLSAYV 199
Query: 153 ------STCL---SSLDAEMVGLKYVEVDYSKYDLVCKV---FDTMRRRNVVAWNTIVSW 200
C+ S + +V + + K + + FD+M R+VV+WNTI++
Sbjct: 200 QNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITG 259
Query: 201 YVKTERYVEAVRQF-----------RMMLRMGIRPSTISFVN-VFPALSSLGDYKSADVV 248
Y ++ + EA + F M+ I+ + +F + + ++
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML 319
Query: 249 YGLLVKLGSEYVNDLF---------VASSAIFMYAELGCFDFARKIFDNCLERNTEVWNT 299
G + E +LF ++ I YA+ G A+ +FD +R+ W
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAA 379
Query: 300 MIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKN 359
MI GY Q+ H EA+ LFVQ +E + + +F SALS + + L+LG+QLH ++K
Sbjct: 380 MIAGYSQSGHSFEALRLFVQ-MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 360 FVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDEGLMLV 399
V NA++ +D+VSWNTMI+ + ++G + L
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 400 YEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ-----THAY-LLRHGIHFEGMESYLID 453
M+++G D T+ A+LSA S+ D G+Q T Y ++ + H+ M +D
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM----VD 554
Query: 454 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVA 500
+ ++GL++ A + KN + D A W ++ +G E A A
Sbjct: 555 LLGRAGLLEDAHNLM-KNMPFEPDAAIWGTLLGASRVHGNTELAETA 600
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 222/483 (45%), Gaps = 76/483 (15%)
Query: 252 LVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPV 311
L+K G + + VA S+ Y G + A ++F ++ +N MI GY++N
Sbjct: 56 LLKCGDSDIKEWNVAISS---YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFE 112
Query: 312 EAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAV 371
A +LF ++ E D + ++ + ++ +LG+ + I +P
Sbjct: 113 LARKLFDEMPERDLVSWN-------VMIKGYVRNRNLGKARELFEI-----MP------- 153
Query: 372 IERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA-ASNLRNQDV- 429
ERDV SWNTM+S + QNG D+ + M ++ + V+ ALLSA N + ++
Sbjct: 154 -ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEAC 208
Query: 430 -------------------GKQTHAYLLRHGIHFEGME-------SYLIDMYAKSGLIKT 463
G ++ F+ M + +I YA+SG I
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE 268
Query: 464 ARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPAC 523
ARQ+F+ +S +D TW AM++GY QN ++EEA F +M E N V+ ++L
Sbjct: 269 ARQLFD--ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGY 322
Query: 524 NPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYT 583
+E+ K+L F + + +NV ++I Y++ G I+ A N+F K+P+++ V++
Sbjct: 323 VQGERMEMAKEL--FDV--MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 584 TMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQE 643
MI GY Q G S AL LF M+ G + +F + LS C+ ++ G Q+ +
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL--- 435
Query: 644 YKIQPSTEHYCCVAD----MLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
++ E C V + M + G + EA + KE+ G + W +++ HG
Sbjct: 436 --VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA--GKDIVSWNTMIAGYSRHGFG 491
Query: 700 ELA 702
E+A
Sbjct: 492 EVA 494
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 332 bits (850), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 348/650 (53%), Gaps = 34/650 (5%)
Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQF-RMMLRMGIRPSTISFVNVFPALSSLG 240
VF M RN+ +WN +V Y K + EA+ + RM+ G++P +F V +
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
D V+ +V+ G E D+ V ++ I MY + G AR +FD R+ WN M
Sbjct: 211 DLARGKEVHVHVVRYGYEL--DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
I GY +N E +ELF + L + D +T S +SA L + LG+ +HAY+I
Sbjct: 269 ISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 361 VALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLMLVY 400
A+ + V N++ + +D+VSW TMIS + N L D+ +
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 401 EMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESYLIDMYAKSG 459
M + D +TV A+LSA + L + D G + H ++ I + + + LI+MY+K
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447
Query: 460 LIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASV 519
I A IF ++ ++ +W ++IAG N EA + RQM + + PN +T+ +
Sbjct: 448 CIDKALDIF--HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAA 504
Query: 520 LPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
L AC +G + GK++H +R + + F+ +L+DMY + G +N A + F +K+
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDV 563
Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
++ ++ GY + G + LF M + PD ITF+++L CS + +V +GL F
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623
Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
M+ +Y + P+ +HY CV D+LGR G++ EA++F++++ + +WG+LL +CR+H
Sbjct: 624 ME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP-AVWGALLNACRIHHKI 681
Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
+L E+ A+ + E+D ++ GY++LL N+YA+ G W V KVR+ M+E GL + GCSW+
Sbjct: 682 DLGELSAQHIFELDKKS--VGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWV 739
Query: 760 DVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG-NKTIQNSNVDAT 808
+V G V+ F S D+ HPQ+ +I +LE +M G K ++S++D T
Sbjct: 740 EVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDET 789
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 206/399 (51%), Gaps = 25/399 (6%)
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIF--MYAELGCFDFARKIFDN 288
+VF AL L ++K A + + ++ L V F M+ G A +F
Sbjct: 95 DVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
ERN WN ++GGY + + EA+ L+ ++L + + D TF L + +L
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 349 GQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQ 388
G+++H ++++ L + V+NA+I RD++SWN MIS + +
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFE 274
Query: 389 NGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GM 447
NG+ EGL L + M+ D +T+T+++SA L ++ +G+ HAY++ G + +
Sbjct: 275 NGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISV 334
Query: 448 ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEH 507
+ L MY +G + A ++F + + +D +W MI+GY N L ++A +R M +
Sbjct: 335 CNSLTQMYLNAGSWREAEKLFSRMER--KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 508 NVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYA 567
+V P+ +T+A+VL AC +G+++ G +LH +I+ L V V +LI+MYSK I+ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 568 ANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMK 606
++F IP KN +++T++I G + AL R MK
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 168/308 (54%), Gaps = 8/308 (2%)
Query: 336 ALSAVSQLQELDLGQQLHAYIIK--NFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDD 393
ALS++S L ++LG A ++ N V V + ER++ SWN ++ + + G D
Sbjct: 120 ALSSMSSLG-VELGNAFLAMFVRFGNLVD-AWYVFGKMSERNLFSWNVLVGGYAKQGYFD 177
Query: 394 EGLMLVYEM-QKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYL 451
E + L + M G D T +L + + GK+ H +++R+G + + + L
Sbjct: 178 EAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNAL 237
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTP 511
I MY K G +K+AR +F++ RD +WNAMI+GY +NG+ E F M +V P
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPR--RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 512 NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF 571
+++T+ SV+ AC +G+ LG+ +H + I ++ V SL MY +G A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
+++ K+ V++TTMI GY + + ++A+ +R M ++PD IT AVLSAC+ G +D
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLD 415
Query: 632 EGLQIFDL 639
G+++ L
Sbjct: 416 TGVELHKL 423
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 215/459 (46%), Gaps = 67/459 (14%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
AR LFD + R + WN +I G+ N + +E + L+ M+ S D T +SV+ AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLS--VDPDLMTLTSVISAC 307
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ R+G+ +H + I V NSL MY S +AE
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE--------------- 352
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
K+F M R+++V+W T++S Y +A+ +RMM + ++P I+ V A +
Sbjct: 353 ---KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA 409
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
+LGD + ++ L +K + ++ + VA++ I MY++ C D A IF N +N W
Sbjct: 410 TLGDLDTGVELHKLAIK--ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISW 467
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
++I G NN EA+ +F++ +++ + + +T +AL+A +++ L G+++HA+++
Sbjct: 468 TSIIAGLRLNNRCFEAL-IFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVL 525
Query: 358 KNFVALPVIVLNAVIE-------------------RDVVSWNTMISAFVQNGLDDEGLML 398
+ V L + NA+++ +DV SWN +++ + + G + L
Sbjct: 526 RTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVEL 585
Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGI-HFEGMESY------- 450
M K D +T +LL S + ++R G+ +F ME Y
Sbjct: 586 FDRMVKSRVRPDEITFISLLCGCSK-----------SQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 451 ----LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
++D+ ++G ++ A + +K D A W A++
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTP-DPAVWGALL 672
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 331/627 (52%), Gaps = 29/627 (4%)
Query: 191 VVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYG 250
++ N +S Y+ + +Y ++ F M+ + ++F+ + + V+
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 251 LLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHP 310
+ +KLG + + L V++S I MY +L F FAR +FDN ER+ WN++I G QN
Sbjct: 340 MALKLGLDLM--LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLE 397
Query: 311 VEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE-LDLGQQLHAYIIK------NFVAL 363
VEA+ LF+Q+L + D T S L A S L E L L +Q+H + IK +FV+
Sbjct: 398 VEAVCLFMQLLRCG-LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 364 PVI----------VLNAVIER---DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
+I + ER D+V+WN M++ + Q+ + L L M KQG D
Sbjct: 457 ALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516
Query: 411 SVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFE 469
T+ + L + GKQ HAY ++ G + + S ++DMY K G + A+ F+
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 470 KNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI 529
D W MI+G +NG E AF F QM V P+ TIA++ A + + +
Sbjct: 577 SIPVPD--DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 530 ELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGY 589
E G+Q+H +++ + FVGTSL+DMY+K G I+ A +F +I N + M++G
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 590 GQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPS 649
QHG + L LF+ MK GI+PD +TF+ VLSACS++GLV E + M +Y I+P
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 650 TEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKL 709
EHY C+AD LGR G V +A ++ + E + ++ +LL +CR+ G +E + VA KL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASA-SMYRTLLAACRVQGDTETGKRVATKL 813
Query: 710 LEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFA 769
LE++ +S +VLLSN+YA W+ + R M+ ++K+ G SWI+V ++ F
Sbjct: 814 LELEPLDSSA--YVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV 871
Query: 770 SKDQEHPQSHKIYEMLERLAMEMRNAG 796
D+ + Q+ IY ++ + +++ G
Sbjct: 872 VDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 174/689 (25%), Positives = 310/689 (44%), Gaps = 94/689 (13%)
Query: 42 IRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGF------VCNNLPYEAILLYSQ 95
I + +S + G AR++FD + V WN+I+ + V N+ +A LL+
Sbjct: 77 INNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQ-QAFLLFRI 135
Query: 96 MKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTC 155
+++ YTS T S +LK C + + ++ H + + + FV +L+N+Y
Sbjct: 136 LRQDVVYTS--RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY--- 190
Query: 156 LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFR 215
LK+ +V K +F+ M R+VV WN ++ Y++ EA+
Sbjct: 191 ----------LKFGKVKEGKV-----LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 216 MMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAE 275
G+ P+ I+ + + +S GD A V + V+++ + + Y
Sbjct: 236 AFHSSGLNPNEIT-LRLLARIS--GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH 292
Query: 276 LGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLS 335
G + K F + +E + E D VTF+
Sbjct: 293 SGQYSALLKCFADMVESDVEC--------------------------------DQVTFIL 320
Query: 336 ALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVI--------------------ERD 375
L+ ++ L LGQQ+H +K + L + V N++I ERD
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 376 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNL-RNQDVGKQTH 434
++SWN++I+ QNGL+ E + L ++ + G D T+T++L AAS+L + KQ H
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 435 AYLLR-HGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGL 493
+ ++ + + + + LID Y+++ +K A +FE+++ D WNAM+AGYTQ+
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHD 497
Query: 494 LEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS 553
+ F M + + T+A+V C + I GKQ+H ++I+ D +++V +
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 554 LIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPD 613
++DMY K G ++ A F IP + V +TTMI G ++G ERA +F M+ G+ PD
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 614 AITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY--CCVADMLGRVGKVVEAYE 671
T + A S +++G QI K+ + + + + DM + G + +AY
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 672 FVKELGEEGNVLEIWGSLLGSCRLHGHSE 700
K + E + W ++L HG +
Sbjct: 675 LFKRI--EMMNITAWNAMLVGLAQHGEGK 701
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 154/591 (26%), Positives = 276/591 (46%), Gaps = 63/591 (10%)
Query: 87 YEAIL-LYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
Y A+L ++ M +S CD T+ +L + +L +G+ VHC ++ + V
Sbjct: 296 YSALLKCFADMVESD--VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
NSL+NMY K+ VFD M R++++WN++++ +
Sbjct: 354 NSLINMY------------------CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKS-ADVVYGLLVKLGSEYVNDLF 264
VEAV F +LR G++P + +V A SSL + S + V+ +K+ + V+D F
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSF 453
Query: 265 VASSAIFMYAELGCFDFARKIFDNCLERNTEV--WNTMIGGYVQNNHPVEAIELFVQVLE 322
V+++ I Y+ C A +F+ N ++ WN M+ GY Q++ + ++LF + +
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE---RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 323 LDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIER-------- 374
E DD T + L ++ G+Q+HAY IK+ L + V + +++
Sbjct: 511 QGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 375 ------------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAAS 422
D V+W TMIS ++NG ++ + +M+ G + D T+ L A+S
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 423 NLRNQDVGKQTHAYLLRHGIH---FEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
L + G+Q HA L+ F G + L+DMYAK G I A +F++ + +
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM--MNIT 685
Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNI-ELGKQLHGF 538
WNAM+ G Q+G +E F+QM + P+ VT VL AC+ G + E K +
Sbjct: 686 AWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Query: 539 SIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIP-EKNSVTYTTMILGYGQHGMSER 597
Y + + + L D ++G++ A N+ + E ++ Y T++ G +E
Sbjct: 746 HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTET 805
Query: 598 ALSLFRSMKGCGIEP-DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
+ + K +EP D+ +V + + + A DE +++ M + +K++
Sbjct: 806 GKRV--ATKLLELEPLDSSAYVLLSNMYAAASKWDE-MKLARTMMKGHKVK 853
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 250/530 (47%), Gaps = 43/530 (8%)
Query: 114 LKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDY 173
L+ + +L +GK H + NP RF+ N+L++MYS C S L Y
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGS--------LTYAR--- 94
Query: 174 SKYDLVCKVFDTMRRRNVVAWNTIVSWYVK-TERYVEAVRQ----FRMMLRMGIRPSTIS 228
+VFD M R++V+WN+I++ Y + +E VE ++Q FR++ + + S ++
Sbjct: 95 -------RVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 229 FVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDN 288
+ G +++ +G K+G + D FVA + + +Y + G + +F+
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLD--GDEFVAGALVNIYLKFGKVKEGKVLFEE 205
Query: 289 CLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDL 348
R+ +WN M+ Y++ EAI+L + +++T L L+ +S + D
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEIT-LRLLARISG-DDSDA 262
Query: 349 GQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFM 408
GQ +K+F +A +++ N +S ++ +G L +M +
Sbjct: 263 GQ------VKSFANGN----DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVE 312
Query: 409 IDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQI 467
D VT +L+ A + + +G+Q H L+ G+ + + LI+MY K AR +
Sbjct: 313 CDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 468 FEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPM- 526
F+ + +RD +WN++IAG QNGL EA F Q+L + P+ T+ SVL A + +
Sbjct: 373 FD--NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 527 GNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMI 586
+ L KQ+H +I+ + FV T+LID YS++ + A +F + + V + M+
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMM 489
Query: 587 LGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
GY Q + L LF M G D T V C + +++G Q+
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV 539
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 212/475 (44%), Gaps = 62/475 (13%)
Query: 26 QIHSLSPPIP-KLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNN 84
Q+H ++ + L S ++ C+ + AR +FD+++ + WN++I G N
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 85 LPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAET-RNLRIGKAVHCHFIRCFSNPSRF 143
L EA+ L+ Q+ + D YT +SVLKA + L + K VH H I+ + F
Sbjct: 396 LEVEAVCLFMQLLRCG--LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 144 VYNSLLNMYS--TCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWY 201
V +L++ YS C +K E+ + +++ ++VAWN +++ Y
Sbjct: 454 VSTALIDAYSRNRC----------MKEAEILFERHNF-----------DLVAWNAMMAGY 492
Query: 202 VKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVN 261
++ + ++ F +M + G R + VF L V+ +K G Y
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG--YDL 550
Query: 262 DLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVL 321
DL+V+S + MY + G A+ FD+ + W TMI G ++N A +F Q +
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ-M 609
Query: 322 ELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK------NFVALPVIVLNA----- 370
L ++ D+ T + A S L L+ G+Q+HA +K FV ++ + A
Sbjct: 610 RLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 371 -----VIER----DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAA 421
+ +R ++ +WN M+ Q+G E L L +M+ G D VT +LSA
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 422 SNLRNQDVGKQTHAYLLRHGIHFE-GME------SYLIDMYAKSGLIKTARQIFE 469
S+ G + AY +H + G++ S L D ++GL+K A + E
Sbjct: 730 SH-----SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIE 779
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 24/221 (10%)
Query: 406 GFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLID----MYAKSGLI 461
GF+ +++T + L+ +GK THA +L E E +LI+ MY+K G +
Sbjct: 44 GFLRNAITSSDLM----------LGKCTHARILTFE---ENPERFLINNLISMYSKCGSL 90
Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGL-----LEEAFVAFRQMLEHNVTPNVVTI 516
AR++F+K DRD +WN+++A Y Q+ +++AF+ FR + + V + +T+
Sbjct: 91 TYARRVFDKMP--DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTL 148
Query: 517 ASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPE 576
+ +L C G + + HG++ + LD + FV +L+++Y K G + +F ++P
Sbjct: 149 SPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY 208
Query: 577 KNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
++ V + M+ Y + G E A+ L + G+ P+ IT
Sbjct: 209 RDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 329/601 (54%), Gaps = 31/601 (5%)
Query: 182 VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGD 241
VFD + + W ++ Y + VE V+ + ++++ G R I F A + L D
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 242 YKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMI 301
+ ++ LVK+ S D V + + MYA+ G A K+F++ RN W +MI
Sbjct: 158 LDNGKKIHCQLVKVPS---FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 302 GGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFV 361
GYV+N+ E + LF ++ E + ++ ++ T+ + + A ++L L G+ H ++K+ +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 362 ALPVIVLNAVIER--------------------DVVSWNTMISAFVQNGLDDEGLMLVYE 401
L ++ ++++ D+V W MI + NG +E L L +
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK 333
Query: 402 MQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYAKSGLI 461
M+ + VT+ ++LS + N ++G+ H ++ GI + + L+ MYAK
Sbjct: 334 MKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQN 393
Query: 462 KTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLP 521
+ A+ +FE ++D WN++I+G++QNG + EA F +M +VTPN VT+AS+
Sbjct: 394 RDAKYVFEMES--EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFS 451
Query: 522 ACNPMGNIELGKQLHGFSIR--YLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNS 579
AC +G++ +G LH +S++ +L +V VGT+L+D Y+K G A +F I EKN+
Sbjct: 452 ACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
Query: 580 VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDL 639
+T++ MI GYG+ G + +L LF M +P+ TF ++LSAC + G+V+EG + F
Sbjct: 512 ITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSS 571
Query: 640 MQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHS 699
M ++Y PST+HY C+ DML R G++ +A + ++++ + +V +G+ L C +H
Sbjct: 572 MYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV-RCFGAFLHGCGMHSRF 630
Query: 700 ELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWI 759
+L E+V KK+L++ ++ Y+VL+SN+YA +G W +VR M++RGL K G S +
Sbjct: 631 DLGEIVIKKMLDLHPDDA--SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Query: 760 D 760
+
Sbjct: 689 E 689
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 178/621 (28%), Positives = 288/621 (46%), Gaps = 75/621 (12%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQ-MKKSSPYTSCDNYTYSSVLKA 116
AR +FD I P +W ++ + N E + LY MK Y D+ +S LKA
Sbjct: 95 ARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRY---DDIVFSKALKA 151
Query: 117 CAETRNLRIGKAVHCHFIRC--FSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYS 174
C E ++L GK +HC ++ F N V LL+MY+ C A
Sbjct: 152 CTELQDLDNGKKIHCQLVKVPSFDN---VVLTGLLDMYAKCGEIKSAH------------ 196
Query: 175 KYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFP 234
KVF+ + RNVV W ++++ YVK + E + F M + + ++ +
Sbjct: 197 ------KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 235 ALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNT 294
A + L +G LVK G E + L +S + MY + G AR++F+ +
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCL--VTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 295 EVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHA 354
+W MI GY N EA+ LF Q ++ EI + VT S LS ++ L+LG+ +H
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLF-QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 355 YIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
IK + V NA++ E+D+V+WN++IS F QNG E
Sbjct: 368 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG------IHFEGME 448
L L + M + + VTV +L SA ++L + VG HAY ++ G +H +
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVH---VG 483
Query: 449 SYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHN 508
+ L+D YAK G ++AR IF+ + +++ TW+AMI GY + G + F +ML+
Sbjct: 484 TALLDFYAKCGDPQSARLIFDTIE--EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ 541
Query: 509 VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTS----LIDMYSKSGVI 564
PN T S+L AC G + GK+ FS Y D N T ++DM +++G +
Sbjct: 542 QKPNESTFTSILSACGHTGMVNEGKKY--FSSMY-KDYNFTPSTKHYTCMVDMLARAGEL 598
Query: 565 NYAANVFAKIPEKNSV-TYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
A ++ K+P + V + + G G H + + + M + PD ++ ++S
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM--LDLHPDDASYYVLVSN 656
Query: 624 CSYA--GLVDEGLQIFDLMQQ 642
YA G ++ ++ +LM+Q
Sbjct: 657 L-YASDGRWNQAKEVRNLMKQ 676
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 245/502 (48%), Gaps = 35/502 (6%)
Query: 233 FPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLER 292
F LS + S +G+L G+ + D+ +A+ + +Y G AR +FD E
Sbjct: 48 FLLLSKCTNIDSLRQSHGVLT--GNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 293 NTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQL 352
+ +W M+ Y N VE ++L+ +L +DD+ F AL A ++LQ+LD G+++
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 353 HAYIIK-----NFVALPVI--------------VLNAVIERDVVSWNTMISAFVQNGLDD 393
H ++K N V ++ V N + R+VV W +MI+ +V+N L +
Sbjct: 165 HCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 394 EGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLI 452
EGL+L M++ + + T L+ A + L GK H L++ GI + + L+
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 453 DMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPN 512
DMY K G I AR++F N+ D W AMI GYT NG + EA F++M + PN
Sbjct: 285 DMYVKCGDISNARRVF--NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 513 VVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLIDMYSKSGVINYAANVF 571
VTIASVL C + N+ELG+ +HG SI+ + D N V +L+ MY+K A VF
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVF 400
Query: 572 AKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVD 631
EK+ V + ++I G+ Q+G AL LF M + P+ +T ++ SAC+ G +
Sbjct: 401 EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLA 460
Query: 632 EGLQIFDLMQQEYKIQPSTEHY-CCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
G + + + S+ H + D + G A + + EE N + W +++
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTI-TWSAMI 518
Query: 691 GSCRLHGHS----ELAEVVAKK 708
G G + EL E + KK
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKK 540
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 226/505 (44%), Gaps = 49/505 (9%)
Query: 26 QIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNL 85
+IH +P + L + G A ++F+ IT V W ++I G+V N+L
Sbjct: 163 KIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 86 PYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVY 145
E ++L+++M++++ + YTY +++ AC + L GK H ++ S +
Sbjct: 223 CEEGLVLFNRMRENNVLG--NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 146 NSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTE 205
SLL+MY C +A +VF+ ++V W ++ Y
Sbjct: 281 TSLLDMYVKCGDISNAR------------------RVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 206 RYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFV 265
EA+ F+ M + I+P+ ++ +V + + + V+GL +K+G + D V
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG---IWDTNV 379
Query: 266 ASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDE 325
A++ + MYA+ A+ +F+ E++ WN++I G+ QN EA+ LF + +
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF-HRMNSES 438
Query: 326 IVFDDVTFLSALSAVSQLQELDLGQQLHAYIIK-NFVALPVI------------------ 366
+ + VT S SA + L L +G LHAY +K F+A +
Sbjct: 439 VTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 367 ---VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
+ + + E++ ++W+ MI + + G L L EM K+ + T T++LSA +
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGH 558
Query: 424 LRNQDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATW 481
+ GK+ + + + + Y ++DM A++G ++ A I EK D +
Sbjct: 559 TGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPI-QPDVRCF 617
Query: 482 NAMIAGYTQNGLLEEAFVAFRQMLE 506
A + G + + + ++ML+
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLD 642
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 330 bits (845), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/626 (32%), Positives = 333/626 (53%), Gaps = 34/626 (5%)
Query: 190 NVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVY 249
+V AWN + V VE++ FR M R G P+ +F V A + L D ++V+
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 250 GLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNH 309
L+K S + +D+FV ++ + M+ + D+A K+F+ ER+ WN M+ G+ Q+ H
Sbjct: 76 AHLIK--SPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 310 PVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLN 369
+A LF + + L+EI D VT ++ + + S + L L + +HA I+ V + V V N
Sbjct: 134 TDKAFSLFRE-MRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 370 AVI----------------------ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
I +R VVSWN+M A+ G + L M ++ F
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIH--FEGMESYLIDMYAKSGLIKTAR 465
D T L ++ N G+ H++ + G E + ++ I MY+KS +AR
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF-ISMYSKSEDTCSAR 311
Query: 466 QIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNP 525
+F+ S R +W MI+GY + G ++EA F M++ P++VT+ S++ C
Sbjct: 312 LLFDIMTS--RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 526 MGNIELGKQLHGFSIRYLLDQ-NVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTT 584
G++E GK + + Y + NV + +LIDMYSK G I+ A ++F PEK VT+TT
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 585 MILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEY 644
MI GY +G+ AL LF M +P+ ITF+AVL AC+++G +++G + F +M+Q Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 645 KIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEV 704
I P +HY C+ D+LGR GK+ EA E ++ + + + IWG+LL +C++H + ++AE
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDA-GIWGALLNACKIHRNVKIAEQ 548
Query: 705 VAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGY 764
A+ L ++ + + P +V ++NIYA G W+ ++R M++R ++K G S I V G
Sbjct: 549 AAESLFNLEPQMAAP--YVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Query: 765 VNRFASKDQEHPQSHKIYEMLERLAM 790
+ F + H ++ IY L L++
Sbjct: 607 NHSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 269/590 (45%), Gaps = 82/590 (13%)
Query: 59 RQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACA 118
R+L+ + WN I V N P E++LL+ +MK+ +N+T+ V KACA
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGG--FEPNNFTFPFVAKACA 63
Query: 119 ETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDL 178
++ + VH H I+ FV + ++M+ C S VDY+
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS-------------VDYA---- 106
Query: 179 VCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSS 238
KVF+ M R+ WN ++S + ++ +A FR M I P +++ + + + S
Sbjct: 107 -AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 239 LGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD--NCLERNTEV 296
K + ++ + ++LG + + VA++ I Y + G D A+ +F+ + +R
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDV--QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVS 223
Query: 297 WNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY- 355
WN+M Y +A L+ +L +E D TF++ ++ + L G+ +H++
Sbjct: 224 WNSMFKAYSVFGEAFDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 356 ----------IIKNFVAL---------PVIVLNAVIERDVVSWNTMISAFVQNGLDDEGL 396
I F+++ ++ + + R VSW MIS + + G DE L
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 397 MLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDM 454
L + M K G D VT+ +L+S + + GK A +G + + + LIDM
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDM 402
Query: 455 YAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVV 514
Y+K G I AR IF+ ++ ++ TW MIAGY NG+ EA F +M++ + PN +
Sbjct: 403 YSKCGSIHEARDIFD--NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHI 460
Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKI 574
T +VL AC G++E G+ +++ Q +Y+ S +++
Sbjct: 461 TFLAVLQACAHSGSLE-----KGWEYFHIMKQ----------VYNISPGLDH-------- 497
Query: 575 PEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
Y+ M+ G+ G E AL L R+M +PDA + A+L+AC
Sbjct: 498 -------YSCMVDLLGRKGKLEEALELIRNMSA---KPDAGIWGALLNAC 537
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 206/454 (45%), Gaps = 51/454 (11%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A ++F+ + WN ++ GF + +A L+ +M+ + + D+ T +++++
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE--ITPDSVTVMTLIQSA 163
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ ++L++ +A+H IR + V N+ ++ Y C LD+ +
Sbjct: 164 SFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC-GDLDSAKL------------- 209
Query: 178 LVCKVFDTMRR--RNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPA 235
VF+ + R R VV+WN++ Y +A + +MLR +P +F+N+ +
Sbjct: 210 ----VFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 236 LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTE 295
+ +++ + LG++ D+ ++ I MY++ AR +FD R
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTD--QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCV 323
Query: 296 VWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAY 355
W MI GY + EA+ LF +++ E D VT LS +S + L+ G+ + A
Sbjct: 324 SWTVMISGYAEKGDMDEALALFHAMIKSGEKP-DLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 356 I-IKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNGLDDE 394
I V++ NA+I E+ VV+W TMI+ + NG+ E
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442
Query: 395 GLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESY--L 451
L L +M + + +T A+L A ++ + + G + + ++++ + G++ Y +
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHYSCM 501
Query: 452 IDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMI 485
+D+ + G ++ A ++ +N S D W A++
Sbjct: 502 VDLLGRKGKLEEALELI-RNMSAKPDAGIWGALL 534
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 4/169 (2%)
Query: 473 SGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELG 532
SG WN I E+ + FR+M PN T V AC + ++
Sbjct: 12 SGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCC 71
Query: 533 KQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQH 592
+ +H I+ +VFVGT+ +DM+ K ++YAA VF ++PE+++ T+ M+ G+ Q
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 593 GMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQ 641
G +++A SLFR M+ I PD++T + ++ + S+ ++ L++ + M
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF----EKSLKLLEAMH 176
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G H AR +FD+ T V W T+I G+ N + EA+ L+S+M ++ T+ +
Sbjct: 407 GSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD--YKPNHITFLA 464
Query: 113 VLKACAETRNLRIG 126
VL+ACA + +L G
Sbjct: 465 VLQACAHSGSLEKG 478
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 202/679 (29%), Positives = 353/679 (51%), Gaps = 54/679 (7%)
Query: 110 YSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYV 169
Y S+L A T+++ KA+HCH I S + ++L Y+ C
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVI-TGGRVSGHILSTLSVTYALC-------------G 63
Query: 170 EVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIR--PSTI 227
+ Y++ K+F+ M + +++++N ++ YV+ Y +A+ F M+ G++ P
Sbjct: 64 HITYAR-----KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 228 SFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFD 287
++ V A L K VV+G +++ S + D +V ++ + MY G + AR +FD
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILR--SWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
R+ WNTMI GY +N + +A+ +F ++ + + D T +S L L++L+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-ESVDLDHATIVSMLPVCGHLKDLE 235
Query: 348 LGQQLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFV 387
+G+ +H + + + + V NA++ RDV++W MI+ +
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 388 QNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGM 447
++G + L L MQ +G ++VT+ +L+S + + GK H + +R ++ + +
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 448 -ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLE 506
E+ LI MYAK + ++F + + W+A+IAG QN L+ +A F++M
Sbjct: 356 IETSLISMYAKCKRVDLCFRVF--SGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 507 HNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINY 566
+V PN+ T+ S+LPA + ++ +H + + ++ T L+ +YSK G +
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 567 AANVFAKIPEKNS----VTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
A +F I EK+ V + +I GYG HG AL +F M G+ P+ ITF + L+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 623 ACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNV 682
ACS++GLV+EGL +F M + YK + HY C+ D+LGR G++ EAY + + E
Sbjct: 534 ACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS 593
Query: 683 LEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVR 742
+WG+LL +C H + +L E+ A KL E++ N+ G +VLL+NIYA G W++++KVR
Sbjct: 594 -TVWGALLAACVTHENVQLGEMAANKLFELEPENT--GNYVLLANIYAALGRWKDMEKVR 650
Query: 743 KEMRERGLRKEVGCSWIDV 761
M GLRK+ G S I++
Sbjct: 651 SMMENVGLRKKPGHSTIEI 669
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 155/645 (24%), Positives = 296/645 (45%), Gaps = 97/645 (15%)
Query: 53 GRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSS 112
G AR+LF+ + + + + +N +I +V L ++AI ++ +M D YTY
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 113 VLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVD 172
V KA E +++++G VH +R + ++V N+LL MY ++
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMY------------------MN 164
Query: 173 YSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNV 232
+ K ++ VFD M+ R+V++WNT++S Y + +A+ F M+ + + V++
Sbjct: 165 FGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSM 224
Query: 233 FPALSSLGDYKSADVVYGLL--VKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
P L D + V+ L+ +LG + + V ++ + MY + G D AR +FD
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLG----DKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
R+ W MI GY ++ A+EL ++++ + + + VT S +S +++ G+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALEL-CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Query: 351 QLHAYIIKNFVALPVIVLNAVI--------------------ERDVVSWNTMISAFVQNG 390
LH + ++ V +I+ ++I + W+ +I+ VQN
Sbjct: 340 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399
Query: 391 LDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMES 449
L + L L M+++ + T+ +LL A + L + H YL + G +
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 450 YLIDMYAKSGLIKTARQIF----EKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQML 505
L+ +Y+K G +++A +IF EK+ S +D W A+I+GY +G A F +M+
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKS--KDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 506 EHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY---LLDQNVFVGTSLIDMYSKSG 562
VTPN +T S L AC+ G +E G L F + + L N + T ++D+ ++G
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY--TCIVDLLGRAG 575
Query: 563 VINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLS 622
++ A N+ IP EP + + A+L+
Sbjct: 576 RLDEAYNLITTIP----------------------------------FEPTSTVWGALLA 601
Query: 623 ACSYAGLVDEGLQIFDLMQQE-YKIQP-STEHYCCVADMLGRVGK 665
AC + E +Q+ ++ + ++++P +T +Y +A++ +G+
Sbjct: 602 AC----VTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 326/625 (52%), Gaps = 72/625 (11%)
Query: 234 PALSSLGDYK---SADVVYGLLVKLGSEYVNDLFVASSAI---FMYAELGCFDFARKIFD 287
P+LS L + K S +++ ++K+G N + S I + +A +F
Sbjct: 35 PSLSLLHNCKTLQSLRIIHAQMIKIGLHNTN--YALSKLIEFCILSPHFEGLPYAISVFK 92
Query: 288 NCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELD 347
E N +WNTM G+ ++ PV A++L+V ++ L ++ + TF L + ++ +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLKSCAKSKAFK 151
Query: 348 LGQQLHAYIIKNFVALPVIVLNAVIE---------------------------------- 373
GQQ+H +++K L + V ++I
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 374 -----------------RDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTA 416
+DVVSWN MIS + + G E L L +M K D T+
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 417 LLSAASNLRNQDVGKQTHAYLLRHGIHFE-GMESYLIDMYAKSGLIKTARQIFEKNDSGD 475
++SA + + ++G+Q H ++ HG + + LID+Y+K G ++TA +FE+
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-- 329
Query: 476 RDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQL 535
+D +WN +I GYT L +EA + F++ML TPN VT+ S+LPAC +G I++G+ +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 536 HGFSIRYL--LDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHG 593
H + + L + + TSLIDMY+K G I A VF I K+ ++ MI G+ HG
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 594 MSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHY 653
++ + LF M+ GI+PD ITFV +LSACS++G++D G IF M Q+YK+ P EHY
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 654 CCVADMLGRVG--KVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLE 711
C+ D+LG G K E + E+ +G IW SLL +C++HG+ EL E A+ L++
Sbjct: 510 GCMIDLLGHSGLFKEAEEMINMMEMEPDG---VIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 712 MDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASK 771
++ N PG +VLLSNIYA G W V K R + ++G++K GCS I++ V+ F
Sbjct: 567 IEPEN--PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 772 DQEHPQSHKIYEMLERLAMEMRNAG 796
D+ HP++ +IY MLE + + + AG
Sbjct: 625 DKFHPRNREIYGMLEEMEVLLEKAG 649
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 161/633 (25%), Positives = 270/633 (42%), Gaps = 101/633 (15%)
Query: 3 SSSVPLPLPP----PPPTATPPPPQLPQIHS---------LSPPIPKLKTPTIRSRLSKI 49
SSS P P PP + P L +H+ + + K+ LSK+
Sbjct: 12 SSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL 71
Query: 50 CQ--------EGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSP 101
+ EG P+ A +F +I P +IWNT+ G ++ P A+ LY M
Sbjct: 72 IEFCILSPHFEGLPY-AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGL 130
Query: 102 YTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDA 161
++YT+ VLK+CA+++ + G+ +H H ++ + +V+ SL++MY DA
Sbjct: 131 LP--NSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 162 EMVGLKYVEVDYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYV 208
V K D Y + K+FD + ++VV+WN ++S Y +T Y
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 209 EAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASS 268
EA+ F+ M++ +RP + V V A + G + V+ + G + ++L + ++
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG--FGSNLKIVNA 306
Query: 269 AIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVF 328
I +Y++ G + A +F+ ++ WNT+IGGY N EA+ LF ++L E
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP- 365
Query: 329 DDVTFLSALSAVSQLQELDLGQQLHAYIIKNF----------------------VALPVI 366
+DVT LS L A + L +D+G+ +H YI K +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 367 VLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRN 426
V N+++ + + SWN MI F +G D L M+K G D +T LLSA S+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 427 QDVGKQTHAYLLRHGIHFEGMESY--LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAM 484
D+G+ + + +E Y +ID+ SGL K A +
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE------------------ 527
Query: 485 IAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLL 544
+ + P+ V S+L AC GN+ELG+ I+ +
Sbjct: 528 ------------------MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK-IE 568
Query: 545 DQNVFVGTSLIDMYSKSGVINYAANVFAKIPEK 577
+N L ++Y+ +G N A A + +K
Sbjct: 569 PENPGSYVLLSNIYASAGRWNEVAKTRALLNDK 601
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 322 bits (826), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 210/720 (29%), Positives = 371/720 (51%), Gaps = 65/720 (9%)
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
D +T+ S+LKACA + L G ++H + + ++ +SL+N+Y+
Sbjct: 45 DTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYA------------ 92
Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
K+ + +++ KVF+ MR R+VV W ++ Y + EA M GI+P
Sbjct: 93 -KFGLLAHAR-----KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 226 TISFVNVFPA------LSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
++ + + L L D+ V+YG + D+ V +S + +Y +
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFA---VIYG--------FDCDIAVMNSMLNLYCKCDHV 195
Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
A+ +FD +R+ WNTMI GY + E ++L + + D + D TF ++LS
Sbjct: 196 GDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYR-MRGDGLRPDQQTFGASLSV 254
Query: 340 VSQLQELDLGQQLHAYIIKNF--------VALPVI------------VLNAVIERDVVSW 379
+ +L++G+ LH I+K AL + VL + +DVV W
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLR 439
MIS ++ G ++ L++ EM + G + S + +++++ + L + D+G H Y+LR
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 440 HGIHFEG-MESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAF 498
HG + + LI MYAK G + + IFE+ + +RD +WNA+I+GY QN L +A
Sbjct: 375 HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN--ERDLVSWNAIISGYAQNVDLCKAL 432
Query: 499 VAFRQMLEHNVTP-NVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDM 557
+ F +M V + T+ S+L AC+ G + +GK +H IR + V T+L+DM
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDM 492
Query: 558 YSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITF 617
YSK G + A F I K+ V++ +I GYG HG + AL ++ G+EP+ + F
Sbjct: 493 YSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIF 552
Query: 618 VAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELG 677
+AVLS+CS+ G+V +GL+IF M +++ ++P+ EH CV D+L R ++ +A++F KE
Sbjct: 553 LAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENF 612
Query: 678 EEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWEN 737
++ ++ G +L +CR +G +E+ +++ + ++E+ ++ G++V L + +A W++
Sbjct: 613 TRPSI-DVLGIILDACRANGKTEVEDIICEDMIELKPGDA--GHYVKLGHSFAAMKRWDD 669
Query: 738 VDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAGN 797
V + +MR GL+K G S I++ G F H S +L+ L+ EM G+
Sbjct: 670 VSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFGS 727
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 177/404 (43%), Gaps = 42/404 (10%)
Query: 40 PTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKS 99
+ S L+ C+ A+ LFD + + V WNT+I G+ E + L +M+
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 100 SPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSL 159
D T+ + L +L +G+ +HC ++ + + +L+ MY C
Sbjct: 240 GLRP--DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC---- 293
Query: 160 DAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLR 219
K + +V +T+ ++VV W ++S ++ R +A+ F ML+
Sbjct: 294 --------------GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 220 MGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCF 279
G S+ + +V + + LG + V+G +++ G Y D +S I MYA+ G
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG--YTLDTPALNSLITMYAKCGHL 397
Query: 280 DFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSA 339
D + IF+ ER+ WN +I GY QN +A+ LF ++ D T +S L A
Sbjct: 398 DKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQA 457
Query: 340 VSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIE--------------------RDVVSW 379
S L +G+ +H +I++F+ +V A+++ +DVVSW
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSW 517
Query: 380 NTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASN 423
+I+ + +G D L + E G + V A+LS+ S+
Sbjct: 518 GILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSH 561
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 19/218 (8%)
Query: 37 LKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQM 96
L TP + S ++ + G + +F+ + V WN II G+ N +A+LL+ +M
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 97 KKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCL 156
K + D++T S+L+AC+ L +GK +HC IR F P V +L++MYS C
Sbjct: 439 KFKT-VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKC- 496
Query: 157 SSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRM 216
Y+E + FD++ ++VV+W +++ Y + A+ +
Sbjct: 497 ----------GYLEAAQ-------RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSE 539
Query: 217 MLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVK 254
L G+ P+ + F+ V + S G + ++ +V+
Sbjct: 540 FLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%)
Query: 481 WNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSI 540
+N+ I + +G ++ F ML + + P+ T S+L AC + + G +H +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 541 RYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALS 600
+ ++ +SL+++Y+K G++ +A VF ++ E++ V +T MI Y + G+ A S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 601 LFRSMKGCGIEPDAITFVAVLSA 623
L M+ GI+P +T + +LS
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG 156
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 83/237 (35%), Gaps = 62/237 (26%)
Query: 578 NSVTY-TTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQI 636
NS Y + I HG ++ LS F SM + PD TF ++L AC+ + GL I
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 637 -------------------------FDLMQQEYKI-----QPSTEHYCCVADMLGRVGKV 666
F L+ K+ + H+ + R G V
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 667 VEAYEFVKELGEEG------NVLEIWGSLLGSCRLHGHSELAEVV--------------- 705
EA V E+ +G +LE+ +L +L + A +
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 706 ---------AKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKEMRERGLRKE 753
AK L + + M ++ ++S YA GN + K+ MR GLR +
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISG-YASVGNMSEILKLLYRMRGDGLRPD 244
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 321 bits (822), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 210/712 (29%), Positives = 372/712 (52%), Gaps = 51/712 (7%)
Query: 106 DNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVG 165
D++ Y ++L+ C + + KA+HC ++ S F N LLN
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLN--------------- 92
Query: 166 LKYVEVDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPS 225
YV+ + K L +FD M RN V++ T+ Y + + + + R G +
Sbjct: 93 -AYVKAGFDKDAL--NLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELN 145
Query: 226 TISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKI 285
F + SL + ++ +VKLG Y ++ FV ++ I Y+ G D AR +
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLG--YDSNAFVGAALINAYSVCGSVDSARTV 203
Query: 286 FDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQE 345
F+ L ++ VW ++ YV+N + ++++L + + + + ++ TF +AL A L
Sbjct: 204 FEGILCKDIVVWAGIVSCYVENGYFEDSLKL-LSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 346 LDLGQQLHAYIIKN-FVALPVI-------------------VLNAVIERDVVSWNTMISA 385
D + +H I+K +V P + V N + + DVV W+ MI+
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 386 FVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFE 445
F QNG +E + L M++ + + T++++L+ + + +G+Q H +++ G +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 446 -GMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQM 504
+ + LID+YAK + TA ++F + S +++ +WN +I GY G +AF FR+
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSS--KNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 505 LEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVI 564
L + V+ VT +S L AC + +++LG Q+HG +I+ + V V SLIDMY+K G I
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDI 500
Query: 565 NYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSAC 624
+A +VF ++ + ++ +I GY HG+ +AL + MK +P+ +TF+ VLS C
Sbjct: 501 KFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGC 560
Query: 625 SYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKELGEEGNVLE 684
S AGL+D+G + F+ M +++ I+P EHY C+ +LGR G++ +A + ++ + E +V+
Sbjct: 561 SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM- 619
Query: 685 IWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWENVDKVRKE 744
IW ++L + + E A A+++L+++ ++ +VL+SN+YA W NV +RK
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDE--ATYVLVSNMYAGAKQWANVASIRKS 677
Query: 745 MRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMRNAG 796
M+E G++KE G SWI+ G V+ F+ +HP I MLE L M+ AG
Sbjct: 678 MKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 186/407 (45%), Gaps = 38/407 (9%)
Query: 51 QEGRPHLARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTY 110
Q G A ++F+ + + V W+ +I F N EA+ L+ +M+++ + + +T
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA--FVVPNEFTL 351
Query: 111 SSVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVE 170
SS+L CA + +G+ +H ++ + +V N+L+++Y+ C
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC--------------- 396
Query: 171 VDYSKYDLVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFV 230
K D K+F + +N V+WNT++ Y +A FR LR + + ++F
Sbjct: 397 ---EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFS 453
Query: 231 NVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCL 290
+ A +SL V+GL +K + + V++S I MYA+ G FA+ +F+
Sbjct: 454 SALGACASLASMDLGVQVHGLAIK--TNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 291 ERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
+ WN +I GY + +A+ + + +++ + + +TFL LS S +D GQ
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRI-LDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 351 QLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMID 410
+ +I++ P + + M+ ++G D+ + L+ + +
Sbjct: 571 ECFESMIRDHGIEPCL----------EHYTCMVRLLGRSGQLDKAMKLIEGIPYE----P 616
Query: 411 SVTV-TALLSAASNLRNQDVGKQTHAYLLRHGIHFEGMESYLIDMYA 456
SV + A+LSA+ N N++ +++ +L+ E + +MYA
Sbjct: 617 SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 283/544 (52%), Gaps = 58/544 (10%)
Query: 273 YAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVT 332
YA L ARK+FD ERN + N MI YV N E +++F + + + D T
Sbjct: 84 YASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYT 142
Query: 333 FLSALSAVSQLQELDLGQQLHAYIIK--------------------NFVALPVIVLNAVI 372
F L A S + +G+++H K F++ +VL+ +
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 373 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQ 432
RDVVSWN+++ + QN D+ L + EM+ D+ T+ +LL A SN ++V
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV--- 259
Query: 433 THAYLLRHGIHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNG 492
Y+ DM+ K G + +WN MI Y +N
Sbjct: 260 ----------------MYVKDMFFKMG---------------KKSLVSWNVMIGVYMKNA 288
Query: 493 LLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGT 552
+ EA + +M P+ V+I SVLPAC + LGK++HG+ R L N+ +
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 553 SLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEP 612
+LIDMY+K G + A +VF + ++ V++T MI YG G A++LF ++ G+ P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 613 DAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEF 672
D+I FV L+ACS+AGL++EG F LM YKI P EH C+ D+LGR GKV EAY F
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 673 VKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEE 732
++++ E N +WG+LLG+CR+H +++ + A KL ++ S GY+VLLSNIYA+
Sbjct: 469 IQDMSMEPNE-RVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS--GYYVLLSNIYAKA 525
Query: 733 GNWENVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEM 792
G WE V +R M+ +GL+K G S ++V ++ F D+ HPQS +IY L+ L +M
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 793 RNAG 796
+ G
Sbjct: 586 KELG 589
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 56/487 (11%)
Query: 181 KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLG 240
KVFD + RNV+ N ++ YV Y E V+ F M +RP +F V A S G
Sbjct: 95 KVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 241 DYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTM 300
++G K+G + LFV + + MY + G AR + D R+ WN++
Sbjct: 155 TIVIGRKIHGSATKVG--LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 301 IGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNF 360
+ GY QN +A+E+ + +E +I D T S L AVS ++ Y+ F
Sbjct: 213 VVGYAQNQRFDDALEV-CREMESVKISHDAGTMASLLPAVSNTTTENV-----MYVKDMF 266
Query: 361 VALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSA 420
+ ++ +VSWN MI +++N + E + L M+ GF D+V++T++L A
Sbjct: 267 FKMG--------KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 421 ASNLRNQDVGKQTHAYLLRHG-IHFEGMESYLIDMYAKSGLIKTARQIFEKNDSGDRDQA 479
+ +GK+ H Y+ R I +E+ LIDMYAK G ++ AR +FE S RD
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKS--RDVV 376
Query: 480 TWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFS 539
+W AMI+ Y +G +A F ++ + + P+ + + L AC+ G +E G+
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL- 435
Query: 540 IRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERAL 599
+ D Y + + + A M+ G+ G + A
Sbjct: 436 --------------MTDHYKITPRLEHLA---------------CMVDLLGRAGKVKEA- 465
Query: 600 SLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQP-STEHYCCVAD 658
+R ++ +EP+ + A+L AC D GL D + +++ P + +Y +++
Sbjct: 466 --YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL---FQLAPEQSGYYVLLSN 520
Query: 659 MLGRVGK 665
+ + G+
Sbjct: 521 IYAKAGR 527
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 206/452 (45%), Gaps = 79/452 (17%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
AR++FD I +I N +I +V N E + ++ M + D+YT+ VLKAC
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN--VRPDHYTFPCVLKAC 150
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYD 177
+ + + IG+ +H + + + FV N L++MY C +A +
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL-------------- 196
Query: 178 LVCKVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALS 237
V D M RR+VV+WN++V Y + +R+ +A+ R M + I + ++ PA+S
Sbjct: 197 ----VLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS 252
Query: 238 SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVW 297
+ + +V+ YV D+F F +K + W
Sbjct: 253 ---NTTTENVM----------YVKDMF--------------FKMGKKSLVS--------W 277
Query: 298 NTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYII 357
N MIG Y++N PVEA+EL+ + +E D D V+ S L A L LG+++H YI
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSR-MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIE 336
Query: 358 KNFVALPVIVLNAVIE--------------------RDVVSWNTMISAFVQNGLDDEGLM 397
+ + +++ NA+I+ RDVVSW MISA+ +G + +
Sbjct: 337 RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVA 396
Query: 398 LVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHGIHFEGME--SYLIDMY 455
L ++Q G + DS+ L+A S+ + G+ + H +E + ++D+
Sbjct: 397 LFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 456
Query: 456 AKSGLIKTARQIFEKNDSGDRDQATWNAMIAG 487
++G +K A + F ++ S + ++ W A++
Sbjct: 457 GRAGKVKEAYR-FIQDMSMEPNERVWGALLGA 487
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 7/165 (4%)
Query: 528 NIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVTYTTMIL 587
+I + +H I L N +G L+ Y+ + A VF +IPE+N + MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 588 GYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQ 647
Y +G + +F +M GC + PD TF VL ACS +G + G +I K+
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG---SATKVG 170
Query: 648 PSTEHYC--CVADMLGRVGKVVEAYEFVKELGEEGNVLEIWGSLL 690
S+ + + M G+ G + EA + E+ V W SL+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVV--SWNSLV 213
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 320 bits (819), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 213/721 (29%), Positives = 353/721 (48%), Gaps = 88/721 (12%)
Query: 87 YEAILLYSQMKKSSPYTSCDN---YTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
++A +S ++ S D+ ++ +S+L AC + R G VH H I S
Sbjct: 20 HDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCI-----SSGV 74
Query: 144 VYNSLLNMYSTCLSSLDAEMVGLKYVEVDYSKYDLVCKVFDTMRRRNVV---AWNTIVSW 200
Y+S+L + + YS ++L + + +++ WN +++
Sbjct: 75 EYHSVL----------------VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIAS 118
Query: 201 YVKTERYVEAVRQFRMMLRMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYV 260
Y K E + E + ++ M+ GIRP ++ +V A D VV+G + S Y
Sbjct: 119 YAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEV--SSYK 176
Query: 261 NDLFVASSAIFMYAELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQV 320
+ L+V ++ I MY AR++FD ER+ WN +I Y EA ELF
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELF--- 233
Query: 321 LELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWN 380
D++ F V E V++WN
Sbjct: 234 ---DKMWFSGV-----------------------------------------EVSVITWN 249
Query: 381 TMISAFVQNGLDDEGLMLVYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRH 440
+ +Q G L L+ M+ +D V + L A S + +GK+ H +
Sbjct: 250 IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHS 309
Query: 441 GIHFEGMESY---LIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEA 497
++G+++ LI MY+K ++ A +F + + + TWN++I+GY Q EEA
Sbjct: 310 S--YDGIDNVRNTLITMYSKCKDLRHALIVFRQTE--ENSLCTWNSIISGYAQLNKSEEA 365
Query: 498 FVAFRQMLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRY-LLDQNVFVGTSLID 556
R+ML PN +T+AS+LP C + N++ GK+ H + +R + SL+D
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 557 MYSKSGVINYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAIT 616
+Y+KSG I A V + +++ VTYT++I GYG G AL+LF+ M GI+PD +T
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 617 FVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGRVGKVVEAYEFVKEL 676
VAVLSACS++ LV EG ++F MQ EY I+P +H+ C+ D+ GR G + +A + + +
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNM 545
Query: 677 GEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYHVLLSNIYAEEGNWE 736
+ + W +LL +C +HG++++ + A+KLLEM N PGY+VL++N+YA G+W
Sbjct: 546 PYKPSG-ATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN--PGYYVLIANMYAAAGSWS 602
Query: 737 NVDKVRKEMRERGLRKEVGCSWIDVGGYVNRFASKDQEHPQSHKIYEMLERLAMEMR-NA 795
+ +VR MR+ G++K+ GC+WID + F+ D P++ Y +L+ L M+ NA
Sbjct: 603 KLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNA 662
Query: 796 G 796
G
Sbjct: 663 G 663
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 319 bits (817), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 208/686 (30%), Positives = 345/686 (50%), Gaps = 107/686 (15%)
Query: 112 SVLKACAETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAEMVGLKYVEV 171
S L +CA + ++ G+ +HC ++ + + ++ NS+LNMY+ C DAE V + ++
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 172 DYSKYDLVC-------------KVFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMML 218
D + ++++ K+FD M R+ V++ T++ Y + ++ EA+ FR M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 219 RMGIRPSTISFVNVFPALSSLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYAELGC 278
+GI + ++ V A S LG ++ L +KL E +FV+++ + MY C
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLE--GRVFVSTNLLHMYCLCLC 223
Query: 279 FDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALS 338
ARK+FD ERN WN M+ GY + +A ELF Q+ E D
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD-------------- 269
Query: 339 AVSQLQELDLGQQLHAYIIKNFVALPVIVLNAVIERDVVSWNTMISAFVQNGLDDEGLML 398
+VSW TMI ++ DE L+
Sbjct: 270 -------------------------------------IVSWGTMIDGCLRKNQLDEALVY 292
Query: 399 VYEMQKQGFMIDSVTVTALLSAASNLRNQDVGKQTHAYLLRHG-----------IHFEGM 447
EM + G V + LLSA++ G Q H +++ G IHF +
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAV 352
Query: 448 ---------------------ESYLIDMYAKSGLIKTARQIFEKNDSGDRDQATWNAMIA 486
+ LI + K+G+++ AR++F++ + D+D +WNAMI+
Sbjct: 353 SNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ--THDKDIFSWNAMIS 410
Query: 487 GYTQNGLLEEAFVAFRQMLEHN-VTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLD 545
GY Q+ + A FR+M+ + V P+ +T+ SV A + +G++E GK+ H + +
Sbjct: 411 GYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP 470
Query: 546 QNVFVGTSLIDMYSKSGVINYAANVFAKIPEKNSVT---YTTMILGYGQHGMSERALSLF 602
N + ++IDMY+K G I A N+F + +S T + +I G HG ++ AL L+
Sbjct: 471 PNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530
Query: 603 RSMKGCGIEPDAITFVAVLSACSYAGLVDEGLQIFDLMQQEYKIQPSTEHYCCVADMLGR 662
++ I+P++ITFV VLSAC +AGLV+ G F+ M+ ++ I+P +HY C+ D+LG+
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 663 VGKVVEAYEFVKELGEEGNVLEIWGSLLGSCRLHGHSELAEVVAKKLLEMDTRNSMPGYH 722
G++ EA E +K++ + +V+ IWG LL + R HG+ E+AE+ A +L +D S G
Sbjct: 591 AGRLEEAKEMIKKMPVKADVM-IWGMLLSASRTHGNVEIAELAATELAAIDP--SHGGCK 647
Query: 723 VLLSNIYAEEGNWENVDKVRKEMRER 748
V+LSN+YA+ G WE+V VR+EMR R
Sbjct: 648 VMLSNVYADAGRWEDVALVREEMRTR 673
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 227/511 (44%), Gaps = 82/511 (16%)
Query: 58 ARQLFDSITRPTTVIWNTIIIGFVCNNLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKAC 117
A +LFD + + V + T+I G+ NN EA+ L+ +M+ + T ++V+ AC
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIML--NEVTLATVISAC 183
Query: 118 AETRNLRIGKAVHCHFIRCFSNPSRFVYNSLLNMYSTCLSSLDAE----------MVGLK 167
+ + + + I+ FV +LL+MY CL DA +V
Sbjct: 184 SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWN 243
Query: 168 YVEVDYSKYDLVCK---VFDTMRRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMGIRP 224
+ YSK L+ + +FD + +++V+W T++ ++ + EA+ + MLR G++P
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKP 303
Query: 225 STISFVNVFPALS-SLGDYKSADVVYGLLVKLGSEYVNDLFVASSAIFMYA--------- 274
S + V++ A + S+G K + +G +VK G + + F+ ++ I YA
Sbjct: 304 SEVMMVDLLSASARSVGSSKGLQL-HGTIVKRGFDCYD--FLQATIIHFYAVSNDIKLAL 360
Query: 275 ----------------------ELGCFDFARKIFDNCLERNTEVWNTMIGGYVQNNHPVE 312
+ G + AR++FD +++ WN MI GY Q+ P
Sbjct: 361 QQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQL 420
Query: 313 AIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQQLHAYIIKNFVALP-------- 364
A+ LF +++ ++ D +T +S SA+S L L+ G++ H Y+ NF +P
Sbjct: 421 ALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPNDNLTAA 478
Query: 365 VIVLNA-----------------VIERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 407
+I + A + + WN +I +G L L ++Q
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPI 538
Query: 408 MIDSVTVTALLSAASNLRNQDVGKQTHAYLLR-HGIHFEGMESY--LIDMYAKSGLIKTA 464
+S+T +LSA + ++GK + HGI + ++ Y ++D+ K+G ++ A
Sbjct: 539 KPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPD-IKHYGCMVDLLGKAGRLEEA 597
Query: 465 RQIFEKNDSGDRDQATWNAMIAGYTQNGLLE 495
+++ +K D W +++ +G +E
Sbjct: 598 KEMIKKMPV-KADVMIWGMLLSASRTHGNVE 627
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 414 VTALLSAASNLRNQDVGKQTHAYLLRHGIHFEG-MESYLIDMYAKSGLIKTARQIFEKND 472
V+AL S AS+ + G+Q H +L+ G+ G + + +++MYAK L+ A +F +
Sbjct: 45 VSALGSCASS-NDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 473 SGD------------RDQATWNAM-----------------IAGYTQNGLLEEAFVAFRQ 503
D R + W+A+ I GY QN EA FR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 504 MLEHNVTPNVVTIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGV 563
M + N VT+A+V+ AC+ +G I + L +I+ L+ VFV T+L+ MY
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 564 INYAANVFAKIPEKNSVTYTTMILGYGQHGMSERALSLFRSMKGCGIEPDAITFVAVLSA 623
+ A +F ++PE+N VT+ M+ GY + G+ E+A LF + E D +++ ++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI----TEKDIVSWGTMIDG 279
Query: 624 CSYAGLVDEGL 634
C +DE L
Sbjct: 280 CLRKNQLDEAL 290
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 147/348 (42%), Gaps = 30/348 (8%)
Query: 24 LPQIHSLSPPIPKLKTPTIRSRLSKICQEGRPHLARQLFDSITRPTTVIWNTIIIGFVCN 83
L L +P+ T L+ + G A +LFD IT V W T+I G +
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 84 NLPYEAILLYSQMKKSSPYTSCDNYTYSSVLKACAETRNLRIGKAVHCHFIRCFSNPSRF 143
N EA++ Y++M + S +L A A + G +H ++ + F
Sbjct: 284 NQLDEALVYYTEMLRCGMKPS--EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 144 VYNSLLNMYSTC-----------------LSSLDAEMVGLKYVEVDYSKYDLVCKVFDTM 186
+ ++++ Y+ ++S +A + G V + +VFD
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF----VKNGMVEQAREVFDQT 397
Query: 187 RRRNVVAWNTIVSWYVKTERYVEAVRQFRMMLRMG-IRPSTISFVNVFPALSSLGDYKSA 245
+++ +WN ++S Y ++ A+ FR M+ ++P I+ V+VF A+SSLG +
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 246 DVVYGLLVKLGSEYVNDLFVASSAIFMYAELGCFDFARKIF---DNCLERNTEVWNTMIG 302
+ L + ND A + I MYA+ G + A IF N WN +I
Sbjct: 458 KRAHDYL-NFSTIPPNDNLTA-AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 303 GYVQNNHPVEAIELFVQVLELDEIVFDDVTFLSALSAVSQLQELDLGQ 350
G + H A++L+ + L I + +TF+ LSA ++LG+
Sbjct: 516 GSATHGHAKLALDLYSDLQSL-PIKPNSITFVGVLSACCHAGLVELGK 562
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 31/145 (21%)
Query: 515 TIASVLPACNPMGNIELGKQLHGFSIRYLLDQNVFVGTSLIDMYSKSGVINYAANVF--- 571
+ S L +C ++ G+Q+H ++ LD N ++ S+++MY+K ++ A +VF
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 572 AKI----------------------------PEKNSVTYTTMILGYGQHGMSERALSLFR 603
AK+ PE++ V+YTT+I GY Q+ A+ LFR
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 604 SMKGCGIEPDAITFVAVLSACSYAG 628
M+ GI + +T V+SACS+ G
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLG 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 299,146,983
Number of Sequences: 539616
Number of extensions: 12748901
Number of successful extensions: 87414
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 63134
Number of HSP's gapped (non-prelim): 11510
length of query: 813
length of database: 191,569,459
effective HSP length: 126
effective length of query: 687
effective length of database: 123,577,843
effective search space: 84897978141
effective search space used: 84897978141
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)