Query 046633
Match_columns 176
No_of_seqs 171 out of 323
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 04:22:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046633.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046633hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fro_A GLGA glycogen synthase; 99.0 6.5E-09 2.2E-13 86.7 13.0 44 7-50 1-47 (439)
2 3c48_A Predicted glycosyltrans 98.8 3E-08 1E-12 83.7 10.9 123 5-139 17-157 (438)
3 2r60_A Glycosyl transferase, g 98.7 5E-08 1.7E-12 84.7 10.4 43 8-50 7-62 (499)
4 2x6q_A Trehalose-synthase TRET 98.7 1.7E-08 5.8E-13 85.1 6.4 44 5-48 37-80 (416)
5 2iuy_A Avigt4, glycosyltransfe 98.7 8.4E-08 2.9E-12 78.8 9.7 98 7-137 2-113 (342)
6 2iw1_A Lipopolysaccharide core 98.6 3.5E-07 1.2E-11 75.0 11.1 88 9-110 1-89 (374)
7 2gek_A Phosphatidylinositol ma 98.5 4E-07 1.4E-11 75.4 9.0 46 5-50 17-64 (406)
8 3okp_A GDP-mannose-dependent a 98.5 4.9E-07 1.7E-11 74.4 8.6 112 7-139 3-122 (394)
9 1f0k_A MURG, UDP-N-acetylgluco 98.4 7E-07 2.4E-11 73.5 8.3 113 9-127 7-124 (364)
10 1rzu_A Glycogen synthase 1; gl 98.4 3E-07 1E-11 79.2 5.0 40 9-48 1-44 (485)
11 2qzs_A Glycogen synthase; glyc 98.3 6.3E-07 2.1E-11 77.1 6.2 40 9-48 1-44 (485)
12 3otg_A CALG1; calicheamicin, T 98.2 2.8E-06 9.6E-11 71.2 7.8 123 3-138 15-162 (412)
13 4fzr_A SSFS6; structural genom 98.2 3.3E-06 1.1E-10 71.2 7.7 124 3-139 10-156 (398)
14 3oti_A CALG3; calicheamicin, T 98.2 3.7E-06 1.3E-10 71.0 7.6 41 4-46 16-56 (398)
15 2iyf_A OLED, oleandomycin glyc 98.2 6.3E-06 2.1E-10 70.0 8.7 41 6-48 5-45 (430)
16 3ia7_A CALG4; glycosysltransfe 98.1 1.1E-05 3.9E-10 66.9 8.2 113 7-127 3-129 (402)
17 3rsc_A CALG2; TDP, enediyne, s 98.0 2.3E-05 7.9E-10 66.0 8.1 114 6-127 18-145 (415)
18 2jjm_A Glycosyl transferase, g 97.9 2.9E-05 1E-09 64.7 8.4 106 20-139 26-137 (394)
19 2iya_A OLEI, oleandomycin glyc 97.8 7.6E-05 2.6E-09 63.4 9.3 41 6-48 10-50 (424)
20 3tsa_A SPNG, NDP-rhamnosyltran 97.8 7.3E-05 2.5E-09 62.4 8.7 38 8-47 1-38 (391)
21 2p6p_A Glycosyl transferase; X 97.8 0.00015 5.1E-09 60.6 10.2 37 9-47 1-37 (384)
22 4amg_A Snogd; transferase, pol 97.7 0.0004 1.4E-08 57.8 10.9 39 7-47 21-59 (400)
23 3oy2_A Glycosyltransferase B73 97.6 4.4E-05 1.5E-09 63.9 4.8 40 9-49 1-41 (413)
24 2x0d_A WSAF; GT4 family, trans 97.5 6.1E-05 2.1E-09 65.7 3.7 44 5-48 43-89 (413)
25 2yjn_A ERYCIII, glycosyltransf 97.4 0.00071 2.4E-08 58.1 9.6 41 5-47 17-57 (441)
26 2vsy_A XCC0866; transferase, g 97.3 0.00042 1.4E-08 60.8 7.3 43 6-48 203-247 (568)
27 2hy7_A Glucuronosyltransferase 96.6 0.0074 2.5E-07 51.8 8.6 37 7-47 13-52 (406)
28 1rrv_A Glycosyltransferase GTF 96.5 0.0055 1.9E-07 52.0 7.1 37 9-47 1-37 (416)
29 1iir_A Glycosyltransferase GTF 96.4 0.012 4.3E-07 49.9 8.5 38 9-48 1-38 (415)
30 3s2u_A UDP-N-acetylglucosamine 96.3 0.0097 3.3E-07 50.6 7.2 103 9-117 3-108 (365)
31 3h4t_A Glycosyltransferase GTF 96.1 0.023 8E-07 48.4 8.9 37 9-47 1-37 (404)
32 3vue_A GBSS-I, granule-bound s 95.7 0.013 4.6E-07 53.0 5.9 49 1-49 1-54 (536)
33 2pq6_A UDP-glucuronosyl/UDP-gl 95.6 0.028 9.7E-07 49.6 7.3 46 1-48 1-46 (482)
34 3s28_A Sucrose synthase 1; gly 95.5 0.11 3.6E-06 50.2 11.6 42 7-48 277-341 (816)
35 4dzz_A Plasmid partitioning pr 95.1 0.14 4.9E-06 38.6 9.0 85 9-112 1-86 (206)
36 2acv_A Triterpene UDP-glucosyl 94.2 0.22 7.6E-06 43.8 9.3 40 7-48 8-49 (463)
37 2vch_A Hydroquinone glucosyltr 94.1 0.4 1.4E-05 42.5 10.7 39 8-48 6-45 (480)
38 3end_A Light-independent proto 92.8 0.73 2.5E-05 37.6 9.5 41 7-48 39-79 (307)
39 3fkq_A NTRC-like two-domain pr 91.3 0.86 3E-05 38.9 8.6 41 7-47 141-181 (373)
40 1v4v_A UDP-N-acetylglucosamine 90.5 0.15 5.1E-06 41.9 2.9 37 7-46 4-41 (376)
41 3la6_A Tyrosine-protein kinase 90.0 1.7 5.6E-05 36.2 9.0 41 8-48 91-131 (286)
42 3beo_A UDP-N-acetylglucosamine 88.3 0.23 8E-06 40.3 2.4 38 7-47 7-46 (375)
43 2c1x_A UDP-glucose flavonoid 3 87.3 2.5 8.4E-05 37.1 8.7 43 1-46 1-45 (456)
44 2a5l_A Trp repressor binding p 87.1 1 3.4E-05 34.2 5.3 41 7-48 4-44 (200)
45 2zki_A 199AA long hypothetical 85.7 1.1 3.8E-05 34.0 4.9 39 7-47 3-41 (199)
46 1ydg_A Trp repressor binding p 85.5 1.6 5.5E-05 33.6 5.8 41 7-48 5-45 (211)
47 3f6r_A Flavodoxin; FMN binding 85.2 1.2 4.2E-05 32.3 4.8 39 8-47 1-39 (148)
48 2xci_A KDO-transferase, 3-deox 84.0 0.98 3.4E-05 38.2 4.3 33 12-47 43-75 (374)
49 3q9l_A Septum site-determining 82.5 2.5 8.5E-05 32.9 5.8 40 9-48 2-41 (260)
50 2xj4_A MIPZ; replication, cell 82.1 2.3 8E-05 34.5 5.6 41 8-48 3-43 (286)
51 3mc3_A DSRE/DSRF-like family p 81.7 2.8 9.5E-05 31.0 5.5 40 7-47 14-55 (134)
52 3ea0_A ATPase, para family; al 81.3 2 7E-05 33.1 4.8 42 7-48 2-44 (245)
53 1g3q_A MIND ATPase, cell divis 81.3 3.1 0.00011 31.9 5.9 39 9-47 2-40 (237)
54 3hbm_A UDP-sugar hydrolase; PS 81.1 2.5 8.5E-05 35.4 5.6 108 9-143 1-114 (282)
55 1vgv_A UDP-N-acetylglucosamine 81.0 1.6 5.3E-05 35.6 4.2 35 9-46 1-36 (384)
56 3kjh_A CO dehydrogenase/acetyl 80.9 1.5 5.1E-05 33.6 3.9 38 9-48 1-38 (254)
57 1g5t_A COB(I)alamin adenosyltr 80.9 13 0.00046 29.8 9.7 97 12-115 31-134 (196)
58 3b6i_A Flavoprotein WRBA; flav 80.5 2.8 9.7E-05 31.5 5.3 39 8-47 1-40 (198)
59 3hly_A Flavodoxin-like domain; 80.3 3 0.0001 31.3 5.4 38 9-47 1-38 (161)
60 2ph1_A Nucleotide-binding prot 80.0 3.4 0.00012 32.9 5.9 41 7-47 16-56 (262)
61 4b4o_A Epimerase family protei 79.8 2.1 7.1E-05 34.3 4.5 37 9-51 1-37 (298)
62 3hbf_A Flavonoid 3-O-glucosylt 79.6 13 0.00043 33.1 10.0 38 8-47 13-52 (454)
63 1wcv_1 SOJ, segregation protei 78.7 2.5 8.6E-05 33.5 4.7 41 8-48 5-45 (257)
64 1hyq_A MIND, cell division inh 78.2 3.4 0.00012 32.5 5.3 39 9-47 2-40 (263)
65 3jy6_A Transcriptional regulat 78.1 3.7 0.00013 32.0 5.4 48 1-49 1-48 (276)
66 2ark_A Flavodoxin; FMN, struct 77.7 3.6 0.00012 31.3 5.2 40 7-47 3-43 (188)
67 3l18_A Intracellular protease 77.1 11 0.00037 27.9 7.6 39 7-48 1-39 (168)
68 2hna_A Protein MIOC, flavodoxi 77.1 4.1 0.00014 29.7 5.1 36 9-45 2-37 (147)
69 1f4p_A Flavodoxin; electron tr 76.9 3 0.0001 30.1 4.3 38 9-47 1-38 (147)
70 3ty2_A 5'-nucleotidase SURE; s 76.9 3.5 0.00012 35.0 5.3 48 1-52 4-51 (261)
71 2phj_A 5'-nucleotidase SURE; S 76.7 11 0.00039 31.5 8.3 88 8-107 1-91 (251)
72 3rpe_A MDAB, modulator of drug 76.5 3 0.0001 33.9 4.6 43 5-47 22-69 (218)
73 4gi5_A Quinone reductase; prot 76.4 4 0.00014 34.4 5.5 40 6-47 20-62 (280)
74 3zqu_A Probable aromatic acid 75.6 5.4 0.00018 32.4 5.9 38 8-48 4-41 (209)
75 3fni_A Putative diflavin flavo 74.9 7.4 0.00025 29.2 6.2 39 8-47 4-42 (159)
76 3egc_A Putative ribose operon 74.1 5.6 0.00019 31.1 5.5 47 3-49 3-49 (291)
77 2vzf_A NADH-dependent FMN redu 73.8 5.7 0.0002 30.5 5.4 40 8-47 2-43 (197)
78 1jx7_A Hypothetical protein YC 73.5 5.8 0.0002 27.5 5.0 38 9-47 2-43 (117)
79 3k9g_A PF-32 protein; ssgcid, 73.3 5.3 0.00018 31.5 5.2 41 7-48 25-65 (267)
80 3s40_A Diacylglycerol kinase; 73.1 6.1 0.00021 32.7 5.8 42 6-47 6-48 (304)
81 3gbv_A Putative LACI-family tr 73.1 6.3 0.00022 30.7 5.6 49 1-49 1-51 (304)
82 1ykg_A SIR-FP, sulfite reducta 72.9 2.3 7.9E-05 32.0 2.9 42 5-47 6-47 (167)
83 3bfv_A CAPA1, CAPB2, membrane 72.5 7.3 0.00025 31.8 6.0 41 7-47 80-120 (271)
84 1rw7_A YDR533CP; alpha-beta sa 71.3 35 0.0012 27.1 9.8 41 8-48 3-52 (243)
85 4hb9_A Similarities with proba 71.2 3.1 0.00011 34.0 3.5 32 8-46 1-32 (412)
86 3zq6_A Putative arsenical pump 71.1 7.1 0.00024 32.5 5.8 41 8-48 12-52 (324)
87 3lqk_A Dipicolinate synthase s 70.6 4.9 0.00017 32.4 4.5 41 7-49 6-46 (201)
88 2fb6_A Conserved hypothetical 69.8 4 0.00014 30.0 3.5 38 7-47 6-48 (117)
89 3cs3_A Sugar-binding transcrip 69.7 14 0.00047 28.7 6.8 46 5-50 5-50 (277)
90 3l49_A ABC sugar (ribose) tran 69.7 8.4 0.00029 29.9 5.6 43 8-50 5-47 (291)
91 2ab0_A YAJL; DJ-1/THIJ superfa 69.6 22 0.00076 27.4 8.0 38 8-48 2-39 (205)
92 1d4a_A DT-diaphorase, quinone 69.5 13 0.00043 30.5 6.9 41 8-48 2-43 (273)
93 2ejb_A Probable aromatic acid 69.4 8.4 0.00029 30.6 5.6 37 9-48 2-38 (189)
94 3qjg_A Epidermin biosynthesis 68.8 5.7 0.0002 31.4 4.4 39 9-50 6-44 (175)
95 2q62_A ARSH; alpha/beta, flavo 68.5 10 0.00036 31.0 6.1 42 6-47 32-74 (247)
96 4dgk_A Phytoene dehydrogenase; 68.3 2.4 8.2E-05 36.4 2.3 46 8-60 1-47 (501)
97 2xxa_A Signal recognition part 68.1 26 0.00088 30.9 9.0 39 9-48 100-139 (433)
98 2bw0_A 10-FTHFDH, 10-formyltet 68.0 8.7 0.0003 32.9 5.8 37 7-50 21-57 (329)
99 3ug7_A Arsenical pump-driving 67.6 8 0.00027 32.8 5.4 42 7-48 23-64 (349)
100 1t5b_A Acyl carrier protein ph 67.5 7.6 0.00026 29.1 4.7 40 8-47 1-44 (201)
101 1sqs_A Conserved hypothetical 67.3 8.3 0.00028 30.5 5.2 40 8-47 1-42 (242)
102 3gyb_A Transcriptional regulat 66.9 11 0.00038 29.1 5.7 44 7-51 4-47 (280)
103 2hy5_A Putative sulfurtransfer 66.9 14 0.00048 26.8 6.0 38 9-47 1-41 (130)
104 3jx9_A Putative phosphoheptose 66.8 6.7 0.00023 30.9 4.5 30 22-51 88-118 (170)
105 3p0r_A Azoreductase; structura 66.7 13 0.00043 29.2 6.1 48 8-55 4-56 (211)
106 3g85_A Transcriptional regulat 66.6 9.3 0.00032 29.7 5.2 46 6-51 9-55 (289)
107 4fu0_A D-alanine--D-alanine li 66.0 4.3 0.00015 34.2 3.3 37 7-46 2-43 (357)
108 3kke_A LACI family transcripti 65.9 13 0.00044 29.5 6.0 44 7-50 14-57 (303)
109 1lss_A TRK system potassium up 65.8 9.3 0.00032 26.4 4.6 33 8-47 4-36 (140)
110 3rfo_A Methionyl-tRNA formyltr 65.6 6.3 0.00022 33.7 4.4 38 6-50 2-39 (317)
111 1sbz_A Probable aromatic acid 65.2 10 0.00035 30.5 5.3 37 9-48 1-38 (197)
112 3l6u_A ABC-type sugar transpor 65.2 11 0.00037 29.3 5.4 46 5-50 5-50 (293)
113 3dhn_A NAD-dependent epimerase 65.0 9.9 0.00034 28.7 5.0 37 8-50 4-40 (227)
114 4fbl_A LIPS lipolytic enzyme; 64.9 4.5 0.00015 31.8 3.1 33 11-46 54-86 (281)
115 3f67_A Putative dienelactone h 64.3 11 0.00039 27.6 5.1 34 10-46 34-67 (241)
116 3ouz_A Biotin carboxylase; str 64.3 12 0.0004 32.3 5.8 38 8-52 6-43 (446)
117 1cp2_A CP2, nitrogenase iron p 64.1 8.2 0.00028 30.3 4.5 37 10-48 3-39 (269)
118 3cio_A ETK, tyrosine-protein k 64.1 11 0.00038 31.1 5.5 41 7-47 102-142 (299)
119 3e61_A Putative transcriptiona 64.0 9.6 0.00033 29.5 4.8 46 5-50 5-50 (277)
120 2afh_E Nitrogenase iron protei 63.7 9.3 0.00032 30.6 4.8 39 9-48 2-40 (289)
121 2d1p_A TUSD, hypothetical UPF0 63.5 18 0.00063 27.2 6.2 41 7-47 11-53 (140)
122 2hpv_A FMN-dependent NADH-azor 63.3 10 0.00036 28.8 4.9 40 8-47 1-45 (208)
123 1hdo_A Biliverdin IX beta redu 63.3 13 0.00044 27.2 5.2 34 9-48 4-37 (206)
124 2gt1_A Lipopolysaccharide hept 63.1 41 0.0014 27.1 8.7 37 9-47 1-39 (326)
125 3miz_A Putative transcriptiona 63.0 15 0.0005 28.9 5.8 44 6-49 11-55 (301)
126 2x4g_A Nucleoside-diphosphate- 62.8 12 0.00042 29.9 5.4 35 7-47 12-46 (342)
127 1psw_A ADP-heptose LPS heptosy 62.1 31 0.0011 27.7 7.8 37 9-47 1-39 (348)
128 3m9w_A D-xylose-binding peripl 61.9 17 0.00058 28.7 6.1 42 8-49 2-43 (313)
129 3pg5_A Uncharacterized protein 61.8 8.5 0.00029 32.6 4.5 40 9-48 1-40 (361)
130 2wtm_A EST1E; hydrolase; 1.60A 61.8 12 0.00039 28.4 4.8 34 10-46 29-64 (251)
131 1g63_A Epidermin modifying enz 61.7 8.4 0.00029 30.5 4.1 39 9-50 3-41 (181)
132 4e08_A DJ-1 beta; flavodoxin-l 61.6 49 0.0017 24.9 8.8 37 9-48 6-42 (190)
133 2rjn_A Response regulator rece 61.2 20 0.00067 25.0 5.7 63 1-73 1-63 (154)
134 3sty_A Methylketone synthase 1 61.1 10 0.00035 28.1 4.3 34 10-46 14-47 (267)
135 3tem_A Ribosyldihydronicotinam 61.0 18 0.0006 29.0 6.0 40 9-48 2-42 (228)
136 3tb6_A Arabinose metabolism tr 61.0 20 0.00069 27.6 6.2 43 8-50 15-57 (298)
137 3e8x_A Putative NAD-dependent 61.0 12 0.00042 28.6 4.9 36 7-48 20-55 (236)
138 2q9u_A A-type flavoprotein; fl 60.9 15 0.0005 31.0 5.8 40 7-47 255-294 (414)
139 3pfb_A Cinnamoyl esterase; alp 60.3 21 0.0007 26.6 6.0 36 11-47 49-84 (270)
140 3hs3_A Ribose operon repressor 60.2 15 0.00051 28.7 5.4 45 5-49 7-52 (277)
141 1mvl_A PPC decarboxylase athal 59.9 11 0.00037 30.6 4.6 39 7-49 18-56 (209)
142 1iow_A DD-ligase, DDLB, D-ALA\ 59.8 12 0.00043 29.6 4.9 35 8-47 2-43 (306)
143 3gpi_A NAD-dependent epimerase 59.6 16 0.00053 28.8 5.4 33 8-47 3-35 (286)
144 3r6w_A FMN-dependent NADH-azor 59.5 16 0.00056 28.1 5.4 41 8-48 1-45 (212)
145 2q1s_A Putative nucleotide sug 59.5 14 0.00048 30.6 5.3 37 5-47 29-66 (377)
146 3g1w_A Sugar ABC transporter; 59.2 13 0.00044 29.2 4.8 38 8-45 4-41 (305)
147 2g1u_A Hypothetical protein TM 59.1 15 0.00051 26.7 4.9 34 7-47 18-51 (155)
148 3d7l_A LIN1944 protein; APC893 59.1 14 0.00048 27.4 4.8 34 7-47 2-35 (202)
149 2fzv_A Putative arsenical resi 58.9 17 0.00058 30.6 5.8 42 6-47 56-98 (279)
150 1e4e_A Vancomycin/teicoplanin 58.6 8.2 0.00028 32.0 3.7 37 8-47 3-44 (343)
151 2rgy_A Transcriptional regulat 58.6 16 0.00056 28.5 5.4 45 6-50 6-50 (290)
152 4hs4_A Chromate reductase; tri 58.4 8.3 0.00029 30.2 3.6 42 6-47 4-46 (199)
153 4f0j_A Probable hydrolytic enz 58.4 14 0.00046 27.8 4.6 35 10-47 48-82 (315)
154 2rk3_A Protein DJ-1; parkinson 58.3 49 0.0017 25.0 8.0 38 8-48 3-40 (197)
155 3ew7_A LMO0794 protein; Q8Y8U8 58.2 15 0.00052 27.2 4.9 27 21-47 7-33 (221)
156 3cnb_A DNA-binding response re 58.1 17 0.00058 24.6 4.8 39 1-45 1-41 (143)
157 3uug_A Multiple sugar-binding 57.7 23 0.00078 28.0 6.1 44 7-50 2-45 (330)
158 3mcu_A Dipicolinate synthase, 57.5 11 0.00037 30.6 4.2 42 7-50 4-45 (207)
159 3ot5_A UDP-N-acetylglucosamine 57.5 13 0.00043 31.9 4.8 42 4-48 23-67 (403)
160 1rpn_A GDP-mannose 4,6-dehydra 57.3 17 0.00057 29.1 5.3 37 5-47 11-47 (335)
161 2fep_A Catabolite control prot 57.2 18 0.00061 28.4 5.4 45 5-49 13-57 (289)
162 1bvy_F Protein (cytochrome P45 56.9 11 0.00038 29.4 4.1 40 7-47 20-59 (191)
163 4id9_A Short-chain dehydrogena 56.6 14 0.00048 29.8 4.7 35 7-47 18-52 (347)
164 3k4h_A Putative transcriptiona 56.4 14 0.00049 28.6 4.6 45 4-48 4-53 (292)
165 3iqw_A Tail-anchored protein t 56.2 16 0.00056 31.0 5.3 41 7-48 14-54 (334)
166 2ew2_A 2-dehydropantoate 2-red 55.9 13 0.00045 29.5 4.4 34 7-47 2-35 (316)
167 3c3k_A Alanine racemase; struc 55.8 21 0.00071 27.8 5.5 45 5-49 5-49 (285)
168 3qit_A CURM TE, polyketide syn 55.8 15 0.00051 26.9 4.4 34 10-46 28-61 (286)
169 1p3y_1 MRSD protein; flavoprot 55.6 9.8 0.00034 30.4 3.6 39 8-49 8-46 (194)
170 3kkj_A Amine oxidase, flavin-c 55.5 8.3 0.00028 27.5 2.9 21 28-48 15-35 (336)
171 3io3_A DEHA2D07832P; chaperone 55.2 18 0.00061 31.0 5.4 40 7-47 16-57 (348)
172 4g65_A TRK system potassium up 55.1 6.5 0.00022 34.9 2.7 34 7-47 2-35 (461)
173 2pk3_A GDP-6-deoxy-D-LYXO-4-he 55.1 18 0.00063 28.6 5.2 36 6-47 10-45 (321)
174 3dkr_A Esterase D; alpha beta 54.9 12 0.00041 27.1 3.7 35 9-46 23-57 (251)
175 4gdh_A DJ-1, uncharacterized p 54.7 21 0.00072 27.6 5.3 39 6-48 2-41 (194)
176 3clk_A Transcription regulator 54.5 22 0.00075 27.7 5.5 44 6-49 6-50 (290)
177 3dbi_A Sugar-binding transcrip 54.4 28 0.00094 28.0 6.2 44 7-50 60-105 (338)
178 2dzd_A Pyruvate carboxylase; b 54.2 14 0.00047 31.9 4.5 36 8-50 6-41 (461)
179 2hy5_B Intracellular sulfur ox 54.1 26 0.0009 26.1 5.6 40 8-47 5-45 (136)
180 2zay_A Response regulator rece 54.1 7.3 0.00025 27.0 2.3 38 1-44 1-38 (147)
181 3o74_A Fructose transport syst 54.1 25 0.00084 26.8 5.6 42 8-49 2-43 (272)
182 3q0i_A Methionyl-tRNA formyltr 54.0 15 0.0005 31.4 4.6 37 7-50 6-42 (318)
183 3h5o_A Transcriptional regulat 53.9 27 0.00092 28.1 6.1 44 7-50 61-104 (339)
184 2ohh_A Type A flavoprotein FPR 53.9 22 0.00076 29.5 5.7 40 7-47 255-294 (404)
185 3l4b_C TRKA K+ channel protien 53.8 17 0.00058 27.9 4.6 32 9-47 1-32 (218)
186 3h2s_A Putative NADH-flavin re 53.5 16 0.00054 27.4 4.3 27 21-47 7-33 (224)
187 3eag_A UDP-N-acetylmuramate:L- 53.5 20 0.00069 29.8 5.4 35 7-47 3-37 (326)
188 2orv_A Thymidine kinase; TP4A 53.3 49 0.0017 27.3 7.6 43 7-50 17-59 (234)
189 2vrn_A Protease I, DR1199; cys 53.0 30 0.001 26.0 5.8 41 5-48 6-46 (190)
190 3bbl_A Regulatory protein of L 52.9 25 0.00084 27.5 5.5 43 8-50 4-50 (287)
191 1lld_A L-lactate dehydrogenase 52.8 16 0.00055 29.7 4.5 37 3-46 2-40 (319)
192 3ez2_A Plasmid partition prote 52.8 25 0.00087 29.7 5.9 42 6-47 105-152 (398)
193 4huj_A Uncharacterized protein 52.7 12 0.0004 29.2 3.6 34 7-47 22-55 (220)
194 3trd_A Alpha/beta hydrolase; c 52.5 30 0.001 24.9 5.6 38 10-47 33-72 (208)
195 3qvo_A NMRA family protein; st 52.3 14 0.00048 28.5 3.9 28 21-48 30-58 (236)
196 3awd_A GOX2181, putative polyo 51.9 29 0.00099 26.7 5.7 27 21-47 20-46 (260)
197 3brq_A HTH-type transcriptiona 51.9 22 0.00076 27.4 5.1 43 7-49 18-62 (296)
198 1dbq_A Purine repressor; trans 51.8 18 0.00063 27.9 4.6 43 7-49 6-48 (289)
199 2iks_A DNA-binding transcripti 51.8 28 0.00095 27.2 5.6 42 7-48 19-60 (293)
200 2dwc_A PH0318, 433AA long hypo 51.7 26 0.00089 29.8 5.9 35 7-48 18-52 (433)
201 1kjn_A MTH0777; hypotethical p 51.3 37 0.0013 26.9 6.2 41 7-47 5-45 (157)
202 3i6i_A Putative leucoanthocyan 51.2 14 0.00048 30.1 4.0 36 7-48 9-44 (346)
203 3u7q_B Nitrogenase molybdenum- 51.2 59 0.002 29.5 8.4 121 7-163 363-509 (523)
204 1byi_A Dethiobiotin synthase; 51.2 25 0.00087 26.5 5.2 33 11-44 4-36 (224)
205 2fuk_A XC6422 protein; A/B hyd 51.1 31 0.0011 24.9 5.5 40 8-47 37-78 (220)
206 1ehi_A LMDDL2, D-alanine:D-lac 51.0 13 0.00044 31.6 3.8 37 8-47 3-45 (377)
207 2b8t_A Thymidine kinase; deoxy 50.9 37 0.0013 27.2 6.4 41 9-50 12-52 (223)
208 1oi4_A Hypothetical protein YH 50.7 36 0.0012 25.9 6.0 40 6-49 21-61 (193)
209 1kjq_A GART 2, phosphoribosylg 50.7 28 0.00096 28.8 5.8 35 7-48 10-44 (391)
210 2d1p_B TUSC, hypothetical UPF0 50.6 31 0.0011 24.6 5.4 39 9-47 2-41 (119)
211 3bjr_A Putative carboxylestera 50.6 44 0.0015 25.5 6.5 40 9-48 50-90 (283)
212 1fmt_A Methionyl-tRNA FMet for 50.2 30 0.001 29.3 6.0 37 7-50 2-38 (314)
213 1t0i_A YLR011WP; FMN binding p 50.1 36 0.0012 25.4 5.8 39 9-47 1-46 (191)
214 3svl_A Protein YIEF; E. coli C 50.1 6.7 0.00023 30.6 1.7 41 7-47 3-44 (193)
215 1yb4_A Tartronic semialdehyde 49.9 14 0.00048 29.4 3.7 32 7-45 2-33 (295)
216 2dri_A D-ribose-binding protei 49.9 21 0.00072 27.6 4.6 41 9-49 2-42 (271)
217 2pzm_A Putative nucleotide sug 49.8 24 0.0008 28.5 5.1 35 7-47 19-53 (330)
218 3r6d_A NAD-dependent epimerase 49.8 24 0.00082 26.6 4.8 36 7-47 3-39 (221)
219 2oze_A ORF delta'; para, walke 49.6 24 0.00082 28.1 5.1 41 9-49 35-76 (298)
220 3lte_A Response regulator; str 49.5 29 0.001 23.2 4.8 33 7-45 5-37 (132)
221 2rh8_A Anthocyanidin reductase 49.4 18 0.00063 28.9 4.3 26 21-46 16-41 (338)
222 3auf_A Glycinamide ribonucleot 49.4 94 0.0032 25.1 8.7 39 6-49 20-60 (229)
223 1qzu_A Hypothetical protein MD 49.4 16 0.00053 29.5 3.9 40 7-49 18-58 (206)
224 3vps_A TUNA, NAD-dependent epi 49.0 17 0.00057 28.7 3.9 36 7-48 6-41 (321)
225 1e5d_A Rubredoxin\:oxygen oxid 49.0 31 0.0011 28.6 5.8 39 8-47 252-290 (402)
226 3q2o_A Phosphoribosylaminoimid 48.9 37 0.0013 28.5 6.3 41 1-48 7-47 (389)
227 3kjx_A Transcriptional regulat 48.4 35 0.0012 27.5 5.9 44 7-50 67-110 (344)
228 3eod_A Protein HNR; response r 48.4 40 0.0014 22.5 5.4 58 6-72 5-62 (130)
229 3g79_A NDP-N-acetyl-D-galactos 48.2 13 0.00044 33.6 3.5 39 4-49 14-54 (478)
230 1gsa_A Glutathione synthetase; 48.2 20 0.00069 28.3 4.3 39 9-47 2-41 (316)
231 3nbm_A PTS system, lactose-spe 48.1 57 0.0019 23.5 6.4 57 5-68 3-60 (108)
232 3hdv_A Response regulator; PSI 47.7 31 0.0011 23.2 4.8 38 1-45 1-38 (136)
233 1zi8_A Carboxymethylenebutenol 47.7 41 0.0014 24.4 5.7 33 11-46 31-63 (236)
234 3doj_A AT3G25530, dehydrogenas 47.7 31 0.001 28.3 5.5 38 4-48 17-54 (310)
235 1ka9_H Imidazole glycerol phos 47.7 28 0.00097 26.6 5.0 31 9-45 3-33 (200)
236 5nul_A Flavodoxin; electron tr 47.7 14 0.00049 26.1 3.1 28 20-47 9-36 (138)
237 3dqp_A Oxidoreductase YLBE; al 47.6 22 0.00076 26.7 4.3 28 21-48 7-34 (219)
238 3rm3_A MGLP, thermostable mono 47.5 17 0.00057 27.1 3.6 35 9-46 41-75 (270)
239 4dll_A 2-hydroxy-3-oxopropiona 47.4 26 0.00088 28.9 5.0 35 6-47 29-63 (320)
240 1ycg_A Nitric oxide reductase; 47.4 34 0.0012 28.3 5.8 39 8-47 251-289 (398)
241 4ffl_A PYLC; amino acid, biosy 47.1 32 0.0011 28.4 5.6 34 8-48 1-34 (363)
242 4ea9_A Perosamine N-acetyltran 47.1 30 0.001 26.7 5.1 36 4-46 8-43 (220)
243 3f2v_A General stress protein 47.0 14 0.0005 29.0 3.3 37 8-47 1-39 (192)
244 2b69_A UDP-glucuronate decarbo 46.9 28 0.00094 28.1 5.0 35 7-47 26-60 (343)
245 1xp8_A RECA protein, recombina 46.7 43 0.0015 28.8 6.5 40 10-50 75-114 (366)
246 1u9c_A APC35852; structural ge 46.6 55 0.0019 25.2 6.6 41 9-49 6-53 (224)
247 3dm5_A SRP54, signal recogniti 46.6 1.3E+02 0.0045 26.8 9.8 36 10-47 102-137 (443)
248 3uk7_A Class I glutamine amido 46.5 77 0.0026 26.8 8.0 38 7-47 11-48 (396)
249 2qjw_A Uncharacterized protein 46.5 29 0.001 24.1 4.6 36 10-46 6-41 (176)
250 3dqz_A Alpha-hydroxynitrIle ly 46.4 15 0.00052 26.9 3.1 35 10-47 6-40 (258)
251 3kht_A Response regulator; PSI 46.4 66 0.0023 21.8 6.8 60 7-73 4-63 (144)
252 2o20_A Catabolite control prot 46.3 35 0.0012 27.3 5.6 43 7-49 62-104 (332)
253 3rp8_A Flavoprotein monooxygen 46.2 15 0.00051 30.6 3.4 35 7-48 22-56 (407)
254 1bg6_A N-(1-D-carboxylethyl)-L 46.1 24 0.0008 28.8 4.5 33 8-47 4-36 (359)
255 1zoi_A Esterase; alpha/beta hy 45.8 24 0.00083 26.7 4.3 34 10-46 24-57 (276)
256 3gv0_A Transcriptional regulat 45.8 24 0.00081 27.6 4.4 45 5-49 5-51 (288)
257 1a8s_A Chloroperoxidase F; hal 45.5 19 0.00066 27.0 3.7 34 10-46 21-54 (273)
258 2h78_A Hibadh, 3-hydroxyisobut 45.4 26 0.0009 28.2 4.7 34 7-47 2-35 (302)
259 1mxh_A Pteridine reductase 2; 45.4 27 0.00092 27.4 4.7 26 21-46 18-43 (276)
260 3e3m_A Transcriptional regulat 45.3 30 0.001 28.1 5.1 43 7-49 69-111 (355)
261 3ghy_A Ketopantoate reductase 45.3 27 0.00093 28.9 4.9 32 8-46 3-34 (335)
262 3ctp_A Periplasmic binding pro 45.1 35 0.0012 27.3 5.4 42 7-48 59-100 (330)
263 2i87_A D-alanine-D-alanine lig 45.1 12 0.00041 31.3 2.6 37 8-47 3-44 (364)
264 2z04_A Phosphoribosylaminoimid 44.9 26 0.00088 28.9 4.7 32 9-47 2-33 (365)
265 3o1i_D Periplasmic protein TOR 44.8 30 0.001 26.8 4.8 42 7-48 4-45 (304)
266 1a8q_A Bromoperoxidase A1; hal 44.6 25 0.00085 26.4 4.2 34 10-46 21-54 (274)
267 3grc_A Sensor protein, kinase; 44.5 44 0.0015 22.6 5.2 33 7-45 5-37 (140)
268 3kto_A Response regulator rece 44.2 71 0.0024 21.6 6.4 58 7-73 5-62 (136)
269 1a88_A Chloroperoxidase L; hal 44.1 27 0.00092 26.2 4.3 34 10-46 23-56 (275)
270 3dzc_A UDP-N-acetylglucosamine 44.0 20 0.0007 30.4 4.0 42 4-48 21-64 (396)
271 3h75_A Periplasmic sugar-bindi 43.8 29 0.001 28.0 4.7 42 8-49 3-45 (350)
272 2qs7_A Uncharacterized protein 43.7 55 0.0019 24.3 6.0 36 9-47 8-45 (144)
273 2hsg_A Glucose-resistance amyl 43.6 33 0.0011 27.4 5.0 43 7-49 59-101 (332)
274 2r8r_A Sensor protein; KDPD, P 43.6 56 0.0019 26.8 6.4 39 7-47 5-43 (228)
275 3d7n_A Flavodoxin, WRBA-like p 43.5 11 0.00038 28.7 2.1 35 6-41 4-38 (193)
276 3gt7_A Sensor protein; structu 43.5 51 0.0017 23.0 5.5 58 7-73 6-63 (154)
277 1fjh_A 3alpha-hydroxysteroid d 43.1 31 0.0011 26.5 4.6 27 21-47 8-34 (257)
278 3u7i_A FMN-dependent NADH-azor 43.1 45 0.0015 26.4 5.7 43 6-48 2-51 (223)
279 1ks9_A KPA reductase;, 2-dehyd 43.1 29 0.001 27.1 4.5 32 9-47 1-32 (291)
280 2wqk_A 5'-nucleotidase SURE; S 43.0 1E+02 0.0034 25.4 8.0 87 9-107 2-91 (251)
281 3rht_A (gatase1)-like protein; 42.9 14 0.00049 30.7 2.8 54 7-69 3-58 (259)
282 2c20_A UDP-glucose 4-epimerase 42.9 27 0.00092 27.8 4.3 27 21-47 8-34 (330)
283 3hdg_A Uncharacterized protein 42.8 34 0.0012 23.1 4.3 38 1-45 1-38 (137)
284 2i3d_A AGR_C_3351P, hypothetic 42.7 38 0.0013 25.4 5.0 38 10-47 49-88 (249)
285 2z1m_A GDP-D-mannose dehydrata 42.6 35 0.0012 27.0 5.0 34 8-47 3-36 (345)
286 2r85_A PURP protein PF1517; AT 42.6 23 0.00079 28.4 3.9 33 8-48 2-34 (334)
287 1ihu_A Arsenical pump-driving 42.4 56 0.0019 29.2 6.8 41 7-48 6-46 (589)
288 2fn9_A Ribose ABC transporter, 42.3 34 0.0012 26.4 4.7 40 9-48 3-42 (290)
289 3i42_A Response regulator rece 42.2 39 0.0013 22.5 4.5 33 7-45 2-34 (127)
290 3cg4_A Response regulator rece 42.0 50 0.0017 22.3 5.1 59 6-73 5-63 (142)
291 3orf_A Dihydropteridine reduct 41.9 35 0.0012 26.6 4.8 34 9-47 22-55 (251)
292 2bi7_A UDP-galactopyranose mut 41.9 41 0.0014 28.4 5.5 53 8-68 3-58 (384)
293 2dkn_A 3-alpha-hydroxysteroid 41.8 33 0.0011 25.9 4.5 27 21-47 8-34 (255)
294 3r5x_A D-alanine--D-alanine li 41.8 19 0.00065 28.8 3.3 38 7-47 2-44 (307)
295 3tov_A Glycosyl transferase fa 41.4 53 0.0018 27.4 6.1 40 6-47 6-47 (349)
296 1tqh_A Carboxylesterase precur 41.4 30 0.001 26.2 4.2 34 10-46 18-51 (247)
297 2vns_A Metalloreductase steap3 41.4 30 0.001 26.8 4.3 34 7-47 27-60 (215)
298 3pid_A UDP-glucose 6-dehydroge 41.3 17 0.00058 32.4 3.1 36 4-47 32-67 (432)
299 3enk_A UDP-glucose 4-epimerase 41.2 37 0.0013 27.1 4.9 27 21-47 12-38 (341)
300 1hkh_A Gamma lactamase; hydrol 41.1 20 0.00068 27.1 3.2 34 10-46 25-58 (279)
301 2j9r_A Thymidine kinase; TK1, 41.1 53 0.0018 26.6 5.8 43 7-50 26-68 (214)
302 3fvw_A Putative NAD(P)H-depend 41.0 42 0.0014 25.6 5.1 40 8-47 2-41 (192)
303 3i4f_A 3-oxoacyl-[acyl-carrier 41.0 39 0.0013 26.2 5.0 34 8-46 6-39 (264)
304 2dtx_A Glucose 1-dehydrogenase 40.9 38 0.0013 26.7 4.9 27 21-47 15-41 (264)
305 3jvd_A Transcriptional regulat 40.9 33 0.0011 27.7 4.6 41 7-47 63-103 (333)
306 2q1w_A Putative nucleotide sug 40.9 39 0.0013 27.2 5.0 35 7-47 20-54 (333)
307 4g6h_A Rotenone-insensitive NA 40.7 17 0.00058 32.2 3.1 35 5-46 39-73 (502)
308 2qv7_A Diacylglycerol kinase D 40.6 51 0.0018 27.3 5.9 38 10-47 26-64 (337)
309 3c1o_A Eugenol synthase; pheny 40.6 23 0.0008 28.1 3.6 35 7-47 3-37 (321)
310 3ruf_A WBGU; rossmann fold, UD 40.3 20 0.00067 28.9 3.1 35 7-47 24-58 (351)
311 3g0o_A 3-hydroxyisobutyrate de 40.3 33 0.0011 27.9 4.5 34 7-47 6-39 (303)
312 1jx6_A LUXP protein; protein-l 40.2 84 0.0029 24.9 6.9 40 6-45 41-81 (342)
313 3snk_A Response regulator CHEY 40.2 69 0.0023 21.6 5.6 58 7-73 13-71 (135)
314 2c5a_A GDP-mannose-3', 5'-epim 39.9 55 0.0019 26.9 6.0 35 7-47 28-62 (379)
315 1byk_A Protein (trehalose oper 39.8 42 0.0014 25.4 4.9 41 9-49 3-43 (255)
316 3ic5_A Putative saccharopine d 39.8 50 0.0017 21.8 4.8 33 8-47 5-38 (118)
317 3hn2_A 2-dehydropantoate 2-red 39.7 27 0.00093 28.6 4.0 31 9-46 3-33 (312)
318 3oh8_A Nucleoside-diphosphate 39.7 34 0.0012 30.0 4.8 35 8-48 147-181 (516)
319 1jay_A Coenzyme F420H2:NADP+ o 39.6 40 0.0014 25.3 4.7 33 9-47 1-33 (212)
320 3kkl_A Probable chaperone prot 39.4 56 0.0019 26.4 5.8 40 8-47 3-51 (244)
321 3cwq_A Para family chromosome 39.4 38 0.0013 25.9 4.6 36 10-47 2-37 (209)
322 3ax6_A Phosphoribosylaminoimid 39.2 51 0.0017 27.3 5.6 32 9-47 2-33 (380)
323 1qpz_A PURA, protein (purine n 39.2 46 0.0016 26.7 5.3 43 7-49 57-99 (340)
324 1ycd_A Hypothetical 27.3 kDa p 39.1 50 0.0017 24.6 5.1 37 9-47 6-45 (243)
325 2woo_A ATPase GET3; tail-ancho 39.0 33 0.0011 28.5 4.5 40 8-48 18-57 (329)
326 1xq6_A Unknown protein; struct 39.0 55 0.0019 24.5 5.4 34 8-47 4-39 (253)
327 1xv5_A AGT, DNA alpha-glucosyl 38.9 80 0.0027 27.1 6.8 39 9-47 2-41 (401)
328 3c24_A Putative oxidoreductase 38.5 42 0.0014 26.8 4.9 34 8-47 11-44 (286)
329 1imj_A CIB, CCG1-interacting f 38.5 75 0.0026 22.5 5.8 35 9-46 33-69 (210)
330 1rtt_A Conserved hypothetical 38.3 26 0.00089 26.4 3.4 40 7-47 5-45 (193)
331 3ihm_A Styrene monooxygenase A 38.3 38 0.0013 28.8 4.8 20 28-47 35-54 (430)
332 3slg_A PBGP3 protein; structur 38.1 31 0.0011 28.1 4.0 36 7-48 23-59 (372)
333 1orr_A CDP-tyvelose-2-epimeras 38.1 35 0.0012 27.1 4.3 26 21-46 8-33 (347)
334 2dpo_A L-gulonate 3-dehydrogen 37.8 33 0.0011 28.9 4.3 38 1-47 1-38 (319)
335 2rjo_A Twin-arginine transloca 37.8 43 0.0015 26.7 4.8 42 8-49 5-46 (332)
336 2an1_A Putative kinase; struct 37.7 35 0.0012 27.7 4.3 37 8-46 5-42 (292)
337 1rkx_A CDP-glucose-4,6-dehydra 37.7 54 0.0018 26.4 5.4 36 7-48 8-43 (357)
338 3i83_A 2-dehydropantoate 2-red 37.6 22 0.00077 29.2 3.1 31 9-46 3-33 (320)
339 3hr4_A Nitric oxide synthase, 37.6 23 0.00078 28.8 3.1 39 7-47 39-77 (219)
340 2pn1_A Carbamoylphosphate synt 37.6 40 0.0014 27.1 4.6 33 7-47 3-37 (331)
341 2qyt_A 2-dehydropantoate 2-red 37.6 25 0.00086 28.1 3.4 33 7-46 7-45 (317)
342 4e7p_A Response regulator; DNA 37.6 98 0.0033 21.2 6.3 62 5-73 17-78 (150)
343 1uxo_A YDEN protein; hydrolase 37.4 44 0.0015 23.7 4.4 37 10-47 6-42 (192)
344 1sb8_A WBPP; epimerase, 4-epim 37.4 49 0.0017 26.7 5.1 35 7-47 26-60 (352)
345 4e12_A Diketoreductase; oxidor 37.2 43 0.0015 27.0 4.8 33 8-47 4-36 (283)
346 3jte_A Response regulator rece 37.1 61 0.0021 21.9 5.0 33 7-45 2-34 (143)
347 2vpq_A Acetyl-COA carboxylase; 37.1 53 0.0018 28.0 5.5 25 26-50 12-36 (451)
348 3ksr_A Putative serine hydrola 37.0 15 0.00051 27.9 1.8 34 10-46 30-63 (290)
349 3qk7_A Transcriptional regulat 36.9 43 0.0015 26.2 4.6 41 7-47 5-49 (294)
350 1y1p_A ARII, aldehyde reductas 36.7 56 0.0019 25.8 5.3 34 7-46 10-43 (342)
351 2rir_A Dipicolinate synthase, 36.7 49 0.0017 26.9 5.1 32 6-44 5-36 (300)
352 1f0y_A HCDH, L-3-hydroxyacyl-C 36.7 47 0.0016 26.9 4.9 34 7-47 14-47 (302)
353 3lcm_A SMU.1420, putative oxid 36.6 72 0.0025 24.4 5.8 39 9-48 1-40 (196)
354 2o2g_A Dienelactone hydrolase; 36.5 68 0.0023 22.7 5.3 36 10-46 37-72 (223)
355 2vk2_A YTFQ, ABC transporter p 36.5 47 0.0016 26.1 4.8 42 8-49 2-43 (306)
356 3pdi_B Nitrogenase MOFE cofact 36.4 1.5E+02 0.0052 26.1 8.6 118 8-160 313-436 (458)
357 3ktd_A Prephenate dehydrogenas 36.3 23 0.0008 30.3 3.1 34 6-47 6-40 (341)
358 3l77_A Short-chain alcohol deh 36.3 42 0.0014 25.5 4.4 27 21-47 9-35 (235)
359 3d8u_A PURR transcriptional re 36.3 38 0.0013 25.9 4.1 42 8-49 3-44 (275)
360 3vot_A L-amino acid ligase, BL 36.3 20 0.00069 30.4 2.7 35 8-49 5-39 (425)
361 2qu7_A Putative transcriptiona 36.2 43 0.0015 25.9 4.4 41 6-47 6-46 (288)
362 3ia2_A Arylesterase; alpha-bet 36.1 37 0.0013 25.4 3.9 35 9-46 20-54 (271)
363 2c29_D Dihydroflavonol 4-reduc 36.1 47 0.0016 26.5 4.8 27 20-46 11-37 (337)
364 2qr3_A Two-component system re 35.8 59 0.002 21.8 4.7 33 7-45 2-34 (140)
365 2bc0_A NADH oxidase; flavoprot 35.6 60 0.002 28.1 5.7 35 7-48 193-227 (490)
366 3bil_A Probable LACI-family tr 35.5 47 0.0016 26.9 4.8 42 8-49 66-107 (348)
367 1ufo_A Hypothetical protein TT 35.5 12 0.00041 27.0 1.0 34 10-46 26-59 (238)
368 1ryi_A Glycine oxidase; flavop 35.4 26 0.00088 28.4 3.1 20 28-47 30-49 (382)
369 1u94_A RECA protein, recombina 35.4 72 0.0025 27.2 6.1 39 10-49 64-102 (356)
370 3ez9_A Para; DNA binding, wing 35.3 30 0.001 29.3 3.6 42 6-47 108-155 (403)
371 3vis_A Esterase; alpha/beta-hy 35.2 41 0.0014 26.6 4.2 34 11-47 99-132 (306)
372 2ahr_A Putative pyrroline carb 35.2 37 0.0013 26.5 4.0 34 7-47 2-35 (259)
373 1yde_A Retinal dehydrogenase/r 35.1 60 0.0021 25.7 5.2 26 21-46 16-41 (270)
374 3huu_A Transcription regulator 35.0 22 0.00076 28.0 2.6 44 6-49 20-68 (305)
375 3k9c_A Transcriptional regulat 35.0 62 0.0021 25.2 5.3 43 7-50 11-53 (289)
376 3edm_A Short chain dehydrogena 34.9 61 0.0021 25.4 5.2 26 21-46 15-40 (259)
377 2ae2_A Protein (tropinone redu 34.8 56 0.0019 25.4 4.9 26 21-46 16-41 (260)
378 1brt_A Bromoperoxidase A2; hal 34.7 35 0.0012 25.9 3.7 34 10-46 25-58 (277)
379 2fvy_A D-galactose-binding per 34.6 60 0.0021 25.1 5.1 41 9-49 3-44 (309)
380 3pdu_A 3-hydroxyisobutyrate de 34.5 30 0.001 27.8 3.3 34 8-48 1-34 (287)
381 3tqq_A Methionyl-tRNA formyltr 34.5 29 0.00099 29.5 3.4 36 8-50 2-37 (314)
382 1i3c_A Response regulator RCP1 34.5 68 0.0023 22.1 4.9 36 1-42 1-36 (149)
383 3guy_A Short-chain dehydrogena 34.5 34 0.0012 26.1 3.6 27 21-47 8-34 (230)
384 3fwz_A Inner membrane protein 34.4 33 0.0011 24.5 3.3 34 8-48 7-40 (140)
385 3ko8_A NAD-dependent epimerase 34.3 47 0.0016 26.1 4.5 27 21-47 7-33 (312)
386 1z82_A Glycerol-3-phosphate de 34.3 46 0.0016 27.3 4.5 33 8-47 14-46 (335)
387 3cky_A 2-hydroxymethyl glutara 34.3 51 0.0018 26.2 4.7 33 7-46 3-35 (301)
388 3pe6_A Monoglyceride lipase; a 34.2 49 0.0017 24.3 4.3 33 11-46 45-77 (303)
389 1n7h_A GDP-D-mannose-4,6-dehyd 34.2 49 0.0017 27.0 4.7 27 21-47 35-61 (381)
390 3m2p_A UDP-N-acetylglucosamine 34.2 47 0.0016 26.3 4.4 33 9-47 3-35 (311)
391 1vl0_A DTDP-4-dehydrorhamnose 34.1 26 0.0009 27.3 2.9 34 7-46 11-44 (292)
392 1i24_A Sulfolipid biosynthesis 34.1 43 0.0015 27.4 4.3 34 7-46 10-43 (404)
393 3dtt_A NADP oxidoreductase; st 34.1 53 0.0018 25.8 4.8 36 7-49 18-53 (245)
394 3k96_A Glycerol-3-phosphate de 34.1 40 0.0014 28.7 4.2 33 8-47 29-61 (356)
395 1jye_A Lactose operon represso 33.7 68 0.0023 25.9 5.4 41 8-48 61-101 (349)
396 3dfu_A Uncharacterized protein 33.6 41 0.0014 27.5 4.0 34 6-46 4-37 (232)
397 3of5_A Dethiobiotin synthetase 33.4 76 0.0026 25.1 5.6 38 8-45 3-40 (228)
398 3ot1_A 4-methyl-5(B-hydroxyeth 33.3 79 0.0027 24.3 5.6 37 8-47 9-45 (208)
399 3uk7_A Class I glutamine amido 33.3 1.5E+02 0.005 25.0 7.7 39 6-47 203-241 (396)
400 3ksm_A ABC-type sugar transpor 33.2 43 0.0015 25.4 4.0 37 10-46 2-38 (276)
401 2obb_A Hypothetical protein; s 33.2 25 0.00085 26.6 2.5 22 27-48 29-50 (142)
402 3op4_A 3-oxoacyl-[acyl-carrier 33.1 68 0.0023 24.9 5.2 32 10-46 10-41 (248)
403 3dk9_A Grase, GR, glutathione 33.0 63 0.0021 27.7 5.3 34 8-48 187-220 (478)
404 1ihu_A Arsenical pump-driving 32.9 67 0.0023 28.7 5.7 39 10-48 327-365 (589)
405 3n7t_A Macrophage binding prot 32.9 90 0.0031 25.3 6.1 40 8-47 9-57 (247)
406 1id1_A Putative potassium chan 32.9 36 0.0012 24.5 3.3 33 8-47 3-35 (153)
407 2ioy_A Periplasmic sugar-bindi 32.8 53 0.0018 25.4 4.5 41 9-49 2-42 (283)
408 1qyd_A Pinoresinol-lariciresin 32.8 35 0.0012 26.8 3.5 34 8-47 4-37 (313)
409 3tpc_A Short chain alcohol deh 32.8 1.7E+02 0.0058 22.5 8.6 27 21-47 14-40 (257)
410 2fz5_A Flavodoxin; alpha/beta 32.7 82 0.0028 21.6 5.1 28 20-47 10-37 (137)
411 4gud_A Imidazole glycerol phos 32.7 53 0.0018 25.0 4.4 30 10-45 4-33 (211)
412 1ges_A Glutathione reductase; 32.6 65 0.0022 27.5 5.4 33 8-47 167-199 (450)
413 3fwy_A Light-independent proto 32.6 79 0.0027 26.4 5.8 37 10-47 49-85 (314)
414 3ius_A Uncharacterized conserv 32.4 54 0.0019 25.4 4.5 34 8-48 5-38 (286)
415 3brs_A Periplasmic binding pro 32.4 39 0.0013 26.0 3.6 39 8-46 5-45 (289)
416 2x6t_A ADP-L-glycero-D-manno-h 32.4 51 0.0018 26.6 4.5 34 8-47 46-80 (357)
417 1auo_A Carboxylesterase; hydro 32.4 35 0.0012 24.4 3.1 33 10-45 16-50 (218)
418 3u7r_A NADPH-dependent FMN red 32.4 58 0.002 25.4 4.7 39 9-47 3-41 (190)
419 2hqm_A GR, grase, glutathione 32.4 65 0.0022 27.8 5.4 35 7-48 184-218 (479)
420 2jae_A L-amino acid oxidase; o 32.3 85 0.0029 26.6 6.1 38 5-49 8-45 (489)
421 1vl8_A Gluconate 5-dehydrogena 32.3 60 0.0021 25.6 4.8 34 9-47 21-54 (267)
422 3hxk_A Sugar hydrolase; alpha- 32.3 53 0.0018 24.7 4.3 38 10-47 45-82 (276)
423 1udb_A Epimerase, UDP-galactos 32.0 63 0.0022 25.7 4.9 26 21-46 7-32 (338)
424 2wyu_A Enoyl-[acyl carrier pro 31.9 34 0.0012 26.8 3.3 21 26-46 22-42 (261)
425 1yo6_A Putative carbonyl reduc 31.6 1.2E+02 0.0039 22.7 6.1 28 21-48 10-39 (250)
426 2gas_A Isoflavone reductase; N 31.6 33 0.0011 26.9 3.1 34 8-47 2-35 (307)
427 3llv_A Exopolyphosphatase-rela 31.6 40 0.0014 23.7 3.3 33 8-47 6-38 (141)
428 1w6u_A 2,4-dienoyl-COA reducta 31.6 88 0.003 24.6 5.7 27 21-47 33-59 (302)
429 4dim_A Phosphoribosylglycinami 31.6 38 0.0013 28.2 3.6 33 7-46 6-38 (403)
430 2rdm_A Response regulator rece 31.4 97 0.0033 20.4 5.2 58 7-73 4-62 (132)
431 3i1j_A Oxidoreductase, short c 31.3 93 0.0032 23.7 5.6 28 20-47 20-47 (247)
432 1vhq_A Enhancing lycopene bios 31.3 95 0.0032 24.3 5.8 41 8-48 6-48 (232)
433 2zat_A Dehydrogenase/reductase 31.2 76 0.0026 24.6 5.2 27 21-47 21-47 (260)
434 1zmd_A Dihydrolipoyl dehydroge 31.2 71 0.0024 27.3 5.4 34 8-48 178-211 (474)
435 1zk4_A R-specific alcohol dehy 31.2 86 0.0029 23.8 5.4 27 21-47 13-39 (251)
436 2r6j_A Eugenol synthase 1; phe 31.2 44 0.0015 26.5 3.8 22 26-47 23-44 (318)
437 3lk7_A UDP-N-acetylmuramoylala 31.1 51 0.0018 28.6 4.5 33 7-46 8-40 (451)
438 4e3z_A Putative oxidoreductase 31.0 68 0.0023 25.1 4.9 33 9-46 26-58 (272)
439 1rsg_A FMS1 protein; FAD bindi 30.9 63 0.0022 28.0 5.1 58 7-72 7-67 (516)
440 1gpw_B Amidotransferase HISH; 30.9 51 0.0017 25.0 4.0 31 9-45 1-36 (201)
441 2pln_A HP1043, response regula 30.8 1.1E+02 0.0036 20.5 5.4 34 6-45 16-49 (137)
442 3obb_A Probable 3-hydroxyisobu 30.8 59 0.002 26.9 4.7 34 7-47 2-35 (300)
443 1yxm_A Pecra, peroxisomal tran 30.8 85 0.0029 24.8 5.5 27 21-47 25-51 (303)
444 1db3_A GDP-mannose 4,6-dehydra 30.8 62 0.0021 26.1 4.7 27 21-47 8-34 (372)
445 2b9w_A Putative aminooxidase; 30.8 78 0.0027 26.1 5.4 47 7-60 5-53 (424)
446 2woj_A ATPase GET3; tail-ancho 30.7 55 0.0019 27.7 4.5 40 8-48 17-58 (354)
447 3dff_A Teicoplanin pseudoaglyc 30.7 87 0.003 25.6 5.6 36 7-49 6-46 (273)
448 2x7x_A Sensor protein; transfe 30.6 63 0.0022 25.7 4.7 41 8-49 6-47 (325)
449 3lua_A Response regulator rece 30.5 1.2E+02 0.0042 20.3 7.2 57 7-72 3-61 (140)
450 2raf_A Putative dinucleotide-b 30.4 61 0.0021 24.9 4.4 33 7-46 18-50 (209)
451 2r9z_A Glutathione amide reduc 30.4 74 0.0025 27.3 5.4 34 8-48 166-199 (463)
452 1e6u_A GDP-fucose synthetase; 30.3 44 0.0015 26.4 3.6 33 8-46 3-35 (321)
453 8abp_A L-arabinose-binding pro 30.1 52 0.0018 25.5 4.0 39 8-46 2-40 (306)
454 3i28_A Epoxide hydrolase 2; ar 30.1 35 0.0012 28.2 3.1 35 10-47 260-294 (555)
455 3hv2_A Response regulator/HD d 30.0 88 0.003 21.6 4.9 33 7-45 13-45 (153)
456 2a8x_A Dihydrolipoyl dehydroge 30.0 77 0.0026 27.0 5.4 35 7-48 170-204 (464)
457 1v59_A Dihydrolipoamide dehydr 29.8 78 0.0027 27.0 5.4 34 8-48 183-216 (478)
458 1oc2_A DTDP-glucose 4,6-dehydr 29.7 60 0.002 25.9 4.4 34 8-47 4-39 (348)
459 2zr9_A Protein RECA, recombina 29.7 1.8E+02 0.0061 24.5 7.6 29 21-49 72-100 (349)
460 3s2y_A Chromate reductase; ura 35.8 11 0.00038 29.4 0.0 41 6-47 4-46 (199)
461 3h5i_A Response regulator/sens 29.6 91 0.0031 21.1 4.8 58 7-73 4-62 (140)
462 3f9i_A 3-oxoacyl-[acyl-carrier 29.3 95 0.0033 23.7 5.4 28 20-47 20-47 (249)
463 3er6_A Putative transcriptiona 29.3 37 0.0013 26.4 3.0 47 1-48 1-52 (209)
464 2wfl_A Polyneuridine-aldehyde 29.3 40 0.0014 25.7 3.1 35 9-46 11-45 (264)
465 2ywr_A Phosphoribosylglycinami 29.2 1.1E+02 0.0038 24.2 5.9 37 8-49 1-39 (216)
466 2a35_A Hypothetical protein PA 29.2 59 0.002 23.9 4.0 34 8-47 5-40 (215)
467 4e21_A 6-phosphogluconate dehy 29.0 61 0.0021 27.7 4.5 33 8-47 22-54 (358)
468 1lvl_A Dihydrolipoamide dehydr 28.9 63 0.0022 27.7 4.7 35 7-48 170-204 (458)
469 1qkk_A DCTD, C4-dicarboxylate 28.9 95 0.0032 21.4 4.9 58 7-73 2-59 (155)
470 1ek6_A UDP-galactose 4-epimera 28.8 76 0.0026 25.3 4.9 26 21-46 9-34 (348)
471 3ic9_A Dihydrolipoamide dehydr 28.7 78 0.0027 27.5 5.3 35 7-48 173-207 (492)
472 3fse_A Two-domain protein cont 28.6 93 0.0032 27.0 5.7 46 1-49 2-48 (365)
473 1mv8_A GMD, GDP-mannose 6-dehy 28.5 62 0.0021 27.9 4.6 32 9-47 1-32 (436)
474 1qyc_A Phenylcoumaran benzylic 28.3 37 0.0013 26.6 2.9 34 8-47 4-37 (308)
475 3rxy_A NIF3 protein; structura 28.2 48 0.0017 28.4 3.7 57 6-69 193-250 (278)
476 3rot_A ABC sugar transporter, 28.0 64 0.0022 25.1 4.2 40 8-47 3-42 (297)
477 3sxp_A ADP-L-glycero-D-mannohe 28.0 1.1E+02 0.0036 24.8 5.7 35 7-47 9-45 (362)
478 3hwr_A 2-dehydropantoate 2-red 27.9 65 0.0022 26.4 4.4 31 7-44 18-48 (318)
479 1wma_A Carbonyl reductase [NAD 27.9 86 0.003 23.8 4.9 27 21-47 11-38 (276)
480 2h0a_A TTHA0807, transcription 27.8 65 0.0022 24.5 4.1 40 10-49 1-40 (276)
481 3d1c_A Flavin-containing putat 27.7 90 0.0031 24.9 5.1 33 8-47 166-198 (369)
482 1czn_A Flavodoxin; FMN binding 27.7 75 0.0026 23.0 4.3 37 9-47 1-37 (169)
483 2p5y_A UDP-glucose 4-epimerase 27.7 54 0.0019 25.8 3.8 26 21-46 7-32 (311)
484 3ktb_A Arsenical resistance op 27.7 91 0.0031 22.9 4.7 49 7-56 3-60 (106)
485 3cg0_A Response regulator rece 27.6 80 0.0027 21.1 4.2 32 6-43 7-38 (140)
486 1zmt_A Haloalcohol dehalogenas 27.2 39 0.0013 26.3 2.8 21 26-46 13-33 (254)
487 2q7v_A Thioredoxin reductase; 27.2 89 0.0031 24.6 5.0 46 1-53 1-46 (325)
488 2qxy_A Response regulator; reg 27.1 96 0.0033 20.8 4.6 57 7-73 3-59 (142)
489 4gvo_A LMO2349 protein; struct 27.1 39 0.0013 25.6 2.7 43 21-65 29-73 (243)
490 4dad_A Putative pilus assembly 27.1 91 0.0031 21.1 4.5 36 5-46 17-53 (146)
491 4dmm_A 3-oxoacyl-[acyl-carrier 27.1 98 0.0033 24.4 5.2 27 20-46 34-60 (269)
492 3ioy_A Short-chain dehydrogena 27.0 69 0.0024 26.2 4.4 27 21-47 15-41 (319)
493 3dfi_A Pseudoaglycone deacetyl 27.0 1.3E+02 0.0045 24.4 6.1 36 7-49 6-46 (270)
494 2iuf_A Catalase; oxidoreductas 27.0 1E+02 0.0034 29.5 6.0 59 7-69 528-592 (688)
495 3hcw_A Maltose operon transcri 26.9 29 0.001 27.2 2.0 44 5-48 4-52 (295)
496 4eso_A Putative oxidoreductase 26.9 1E+02 0.0036 24.0 5.3 26 21-46 15-40 (255)
497 1xu9_A Corticosteroid 11-beta- 26.8 1E+02 0.0036 24.2 5.3 27 21-47 35-61 (286)
498 3orq_A N5-carboxyaminoimidazol 26.6 1E+02 0.0036 25.7 5.6 35 7-48 11-45 (377)
499 2ehd_A Oxidoreductase, oxidore 26.5 61 0.0021 24.5 3.7 28 20-47 11-38 (234)
500 2qae_A Lipoamide, dihydrolipoy 26.5 96 0.0033 26.4 5.4 34 7-47 173-206 (468)
No 1
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.98 E-value=6.5e-09 Score=86.66 Aligned_cols=44 Identities=27% Similarity=0.504 Sum_probs=39.4
Q ss_pred CCceEEEEeCC---CCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPD---LGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpd---LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++|||+++.+. ...||+|+.+.++|++|+++||+|+++|...+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 47999999988 567999999999999999999999999976543
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.80 E-value=3e-08 Score=83.70 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=69.3
Q ss_pred cCCCceEEEEeCCC---------CCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC-cccccccCCceeEEEeCCc----
Q 046633 5 RSSKLNVAIIHPDL---------GIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR-RCFEETVNGTFPVTVYGDF---- 70 (176)
Q Consensus 5 ~~~~~kI~~~hpdL---------giGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~-hcF~Et~~G~l~V~v~Gd~---- 70 (176)
.++||||+++.++. +.||+|+.+.++|++|+++||+|+++|...+.. ....+..+| +++......
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-v~v~~~~~~~~~~ 95 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAEN-LRVINIAAGPYEG 95 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETT-EEEEEECCSCSSS
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCC-eEEEEecCCCccc
Confidence 45789999999643 579999999999999999999999999875422 223344455 666654321
Q ss_pred ccc-hhhhhHHHHHHHHHHHHHHHHHHHh-cCCCcEEEEcCCCccchh--eecccCceeeccccccccccchh
Q 046633 71 LPR-HFFYRLHALCAYLRCLFVALCVLLR-SSSYDVIIADQVSVVIPV--LKLRSSTKVFMLNIARYMQILEL 139 (176)
Q Consensus 71 lPr-~i~gr~~alcA~lR~l~~~~~~~~~-~~~~DVvi~Dqvs~~iP~--l~l~~~~~vlf~~~~~YcHFPd~ 139 (176)
++. .+.. .+.+..+.+. ...++ ..+||+|.+......... ++...+.|+++ .+|-+..
T Consensus 96 ~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~-----~~h~~~~ 157 (438)
T 3c48_A 96 LSKEELPT---QLAAFTGGML---SFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIH-----TAHTLAA 157 (438)
T ss_dssp CCGGGGGG---GHHHHHHHHH---HHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEE-----ECSSCHH
T ss_pred cchhHHHH---HHHHHHHHHH---HHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEE-----EecCCcc
Confidence 111 1111 1122222221 21122 235999997653221111 12223678888 8887654
No 3
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.74 E-value=5e-08 Score=84.71 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=38.1
Q ss_pred CceEEEEeCC-------------CCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPD-------------LGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpd-------------LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+|||+++.+. .+.||+|+.+.++|++|+++||+|+++|...+.
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~ 62 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKD 62 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCB
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCc
Confidence 5899999975 368999999999999999999999999986543
No 4
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.71 E-value=1.7e-08 Score=85.10 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=40.2
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
..++|||+++.+.+..||+|+.+.++|++|+++||+|++++...
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~ 80 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEG 80 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Confidence 34679999999999999999999999999999999999998763
No 5
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.68 E-value=8.4e-08 Score=78.77 Aligned_cols=98 Identities=22% Similarity=0.294 Sum_probs=63.0
Q ss_pred CCceEEEEeCC--------------CCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCccc
Q 046633 7 SKLNVAIIHPD--------------LGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLP 72 (176)
Q Consensus 7 ~~~kI~~~hpd--------------LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lP 72 (176)
++|||+++.+. ...||+|+.+.++|++|+++||+|++++....... .++ +++.....|
T Consensus 2 ~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-----~~~-~~~~~~~~~-- 73 (342)
T 2iuy_A 2 RPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-----RPG-LTVVPAGEP-- 73 (342)
T ss_dssp -CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC-----STT-EEECSCCSH--
T ss_pred CccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC-----CCc-ceeccCCcH--
Confidence 47999999998 36799999999999999999999999997643321 133 333221110
Q ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEEcCCCccchheecccCceeeccccccccccc
Q 046633 73 RHFFYRLHALCAYLRCLFVALCVLLRSSSYDVIIADQVSVVIPVLKLRSSTKVFMLNIARYMQIL 137 (176)
Q Consensus 73 r~i~gr~~alcA~lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l~l~~~~~vlf~~~~~YcHFP 137 (176)
+ .+ .-.+++.+||+|.+-......+..+ ..+.| ++ .+|-+
T Consensus 74 --------------~---~l-~~~l~~~~~Dvi~~~~~~~~~~~~~-~~~~p-v~-----~~h~~ 113 (342)
T 2iuy_A 74 --------------E---EI-ERWLRTADVDVVHDHSGGVIGPAGL-PPGTA-FI-----SSHHF 113 (342)
T ss_dssp --------------H---HH-HHHHHHCCCSEEEECSSSSSCSTTC-CTTCE-EE-----EEECS
T ss_pred --------------H---HH-HHHHHhcCCCEEEECCchhhHHHHh-hcCCC-EE-----EecCC
Confidence 0 11 1134556899999877544433322 34566 66 56654
No 6
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.60 E-value=3.5e-07 Score=74.98 Aligned_cols=88 Identities=17% Similarity=0.202 Sum_probs=55.9
Q ss_pred ceEEEEeCC-CCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccchhhhhHHHHHHHHH
Q 046633 9 LNVAIIHPD-LGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPRHFFYRLHALCAYLR 87 (176)
Q Consensus 9 ~kI~~~hpd-LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA~lR 87 (176)
|||+++.++ ...||+|+.+.++|++|+++||+|+++|...+.. ..+| +++.... ..-...........+
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~-----~~~~-~~v~~~~----~~~~~~~~~~~~~~~ 70 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGD-----CPKA-FELIQVP----VKSHTNHGRNAEYYA 70 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEECSC-----CCTT-CEEEECC----CCCSSHHHHHHHHHH
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCCCCC-----CCCC-cEEEEEc----cCcccchhhHHHHHH
Confidence 799999887 4679999999999999999999999999874321 2234 6666543 211111111111122
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCC
Q 046633 88 CLFVALCVLLRSSSYDVIIADQV 110 (176)
Q Consensus 88 ~l~~~~~~~~~~~~~DVvi~Dqv 110 (176)
.+ .-.+++.+||+|++-+.
T Consensus 71 ~l----~~~i~~~~~Dvv~~~~~ 89 (374)
T 2iw1_A 71 WV----QNHLKEHPADRVVGFNK 89 (374)
T ss_dssp HH----HHHHHHSCCSEEEESSC
T ss_pred HH----HHHHhccCCCEEEEecC
Confidence 21 22345678999997664
No 7
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.50 E-value=4e-07 Score=75.42 Aligned_cols=46 Identities=24% Similarity=0.403 Sum_probs=37.8
Q ss_pred cCCCceEEEEeCCC--CCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 5 RSSKLNVAIIHPDL--GIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 5 ~~~~~kI~~~hpdL--giGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
..+||||+++.+.. ..||+|+.+.+++++|+++||+|++++.....
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 34679999999876 34999999999999999999999999987544
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.47 E-value=4.9e-07 Score=74.37 Aligned_cols=112 Identities=12% Similarity=0.198 Sum_probs=68.4
Q ss_pred CCceEEEEeCCCC--CCchHHHHHHHHHHHHHCCCeEEEEEeecCCC--cccccccCCceeEEEeCCcccchhhhhHHHH
Q 046633 7 SKLNVAIIHPDLG--IGGAERLIVDAAVELVSHGHNVHVFTAHHDKR--RCFEETVNGTFPVTVYGDFLPRHFFYRLHAL 82 (176)
Q Consensus 7 ~~~kI~~~hpdLg--iGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~--hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~al 82 (176)
++|||+++.+... .||+|+.+.++|++| +||+|+++|...+.. ..+++ ..| +++.....+.....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~------- 71 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK-TLD-YEVIRWPRSVMLPT------- 71 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT-TCS-SEEEEESSSSCCSC-------
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc-ccc-eEEEEccccccccc-------
Confidence 5789999998765 899999999999999 699999999875543 22222 233 66666544221111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEcCCCccchhee----cccCceeeccccccccccchh
Q 046633 83 CAYLRCLFVALCVLLRSSSYDVIIADQVSVVIPVLK----LRSSTKVFMLNIARYMQILEL 139 (176)
Q Consensus 83 cA~lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l~----l~~~~~vlf~~~~~YcHFPd~ 139 (176)
...++.+. . .+.+.+||+|++.... ...++. .....++++ .+|-.+.
T Consensus 72 ~~~~~~l~---~-~~~~~~~Dvv~~~~~~-~~~~~~~~~~~~~~~~~i~-----~~h~~~~ 122 (394)
T 3okp_A 72 PTTAHAMA---E-IIREREIDNVWFGAAA-PLALMAGTAKQAGASKVIA-----STHGHEV 122 (394)
T ss_dssp HHHHHHHH---H-HHHHTTCSEEEESSCT-TGGGGHHHHHHTTCSEEEE-----ECCSTHH
T ss_pred hhhHHHHH---H-HHHhcCCCEEEECCcc-hHHHHHHHHHhcCCCcEEE-----Eeccchh
Confidence 11122222 2 3456789999975542 222222 222236888 8885543
No 9
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.42 E-value=7e-07 Score=73.49 Aligned_cols=113 Identities=14% Similarity=0.081 Sum_probs=65.0
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCccccccc-CCceeEEEeCC-cccch-hhhhHHHHHHH
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETV-NGTFPVTVYGD-FLPRH-FFYRLHALCAY 85 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~-~G~l~V~v~Gd-~lPr~-i~gr~~alcA~ 85 (176)
|||+++.. |.||+|+.+.++|++|+++||+|+++|...... .++.. .| +++..... .+++. ...++......
T Consensus 7 mkIl~~~~--~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (364)
T 1f0k_A 7 KRLMVMAG--GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVPKHG-IEIDFIRISGLRGKGIKALIAAPLRI 81 (364)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGGGGT-CEEEECCCCCCTTCCHHHHHTCHHHH
T ss_pred cEEEEEeC--CCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhccccC-CceEEecCCccCcCccHHHHHHHHHH
Confidence 89999974 578999999999999999999999999763211 11222 23 66554432 12221 11122222223
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCccchhe--ecccCceeec
Q 046633 86 LRCLFVALCVLLRSSSYDVIIADQVSVVIPVL--KLRSSTKVFM 127 (176)
Q Consensus 86 lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l--~l~~~~~vlf 127 (176)
++.+..+.. .+++.+||+|+++......|.. ....+.|++.
T Consensus 82 ~~~~~~l~~-~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~ 124 (364)
T 1f0k_A 82 FNAWRQARA-IMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVL 124 (364)
T ss_dssp HHHHHHHHH-HHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHH-HHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEE
Confidence 333333322 3456689999998754334422 2233556555
No 10
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.36 E-value=3e-07 Score=79.17 Aligned_cols=40 Identities=18% Similarity=0.352 Sum_probs=36.7
Q ss_pred ceEEEEeCCC----CCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDL----GIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdL----giGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||+++.+.. ..||+|+.+.++|++|+++||+|+++|...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 7999999876 579999999999999999999999999764
No 11
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.33 E-value=6.3e-07 Score=77.15 Aligned_cols=40 Identities=15% Similarity=0.307 Sum_probs=36.7
Q ss_pred ceEEEEeCCC----CCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDL----GIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdL----giGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||+++.+.. ..||+|+.+.++|++|+++||+|+++|...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 7999999876 579999999999999999999999999764
No 12
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.22 E-value=2.8e-06 Score=71.21 Aligned_cols=123 Identities=13% Similarity=0.091 Sum_probs=69.7
Q ss_pred cccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccc--cCCceeEEEeCCc----cc----
Q 046633 3 QRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEET--VNGTFPVTVYGDF----LP---- 72 (176)
Q Consensus 3 ~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et--~~G~l~V~v~Gd~----lP---- 72 (176)
+++..+|||+|+-+. .+|...-+..+|++|+++||+|+++|... +.+. ..| +++...... ++
T Consensus 15 ~~~~~~MrIl~~~~~--~~Gh~~~~~~la~~L~~~GheV~v~~~~~-----~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 15 HIEGRHMRVLFASLG--THGHTYPLLPLATAARAAGHEVTFATGEG-----FAGTLRKLG-FEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp ---CCSCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEECGG-----GHHHHHHTT-CEEEECCCCHHHHHHHHHH
T ss_pred CcccceeEEEEEcCC--CcccHHHHHHHHHHHHHCCCEEEEEccHH-----HHHHHHhcC-CceeecCcccccchhhhhh
Confidence 345567999999855 77888888899999999999999999752 2221 234 666655420 00
Q ss_pred -------------chhhhhHHHHHHH--HHHHHHHHHHHHhcCCCcEEEEcCCCccchheecccCceeeccccccccccc
Q 046633 73 -------------RHFFYRLHALCAY--LRCLFVALCVLLRSSSYDVIIADQVSVVIPVLKLRSSTKVFMLNIARYMQIL 137 (176)
Q Consensus 73 -------------r~i~gr~~alcA~--lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l~l~~~~~vlf~~~~~YcHFP 137 (176)
..........+.. .+.....+.-.+++.+||+|++|....+.++.....+.|+++ +.|-+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~-----~~~~~ 161 (412)
T 3otg_A 87 IRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTIC-----HGVGR 161 (412)
T ss_dssp HHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEE-----ECCSC
T ss_pred hhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEE-----ecccc
Confidence 0101111111111 111111112234566899999997555445444344667777 66654
Q ss_pred h
Q 046633 138 E 138 (176)
Q Consensus 138 d 138 (176)
.
T Consensus 162 ~ 162 (412)
T 3otg_A 162 D 162 (412)
T ss_dssp C
T ss_pred c
Confidence 4
No 13
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.20 E-value=3.3e-06 Score=71.15 Aligned_cols=124 Identities=17% Similarity=0.122 Sum_probs=67.0
Q ss_pred cccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccc--cCCceeEEEeCC-c---------
Q 046633 3 QRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEET--VNGTFPVTVYGD-F--------- 70 (176)
Q Consensus 3 ~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et--~~G~l~V~v~Gd-~--------- 70 (176)
++++.+|||+|+... .+|-..-++.+|.+|+++||+|+++|... +.+. ..| +++...+. .
T Consensus 10 ~~~~~~MrIl~~~~~--~~gh~~~~~~La~~L~~~GheV~v~~~~~-----~~~~~~~~G-~~~~~~~~~~~~~~~~~~~ 81 (398)
T 4fzr_A 10 VPRGSHMRILVIAGC--SEGFVMPLVPLSWALRAAGHEVLVAASEN-----MGPTVTGAG-LPFAPTCPSLDMPEVLSWD 81 (398)
T ss_dssp -----CCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEEEGG-----GHHHHHHTT-CCEEEEESSCCHHHHHSBC
T ss_pred CCCCCceEEEEEcCC--CcchHHHHHHHHHHHHHCCCEEEEEcCHH-----HHHHHHhCC-CeeEecCCccchHhhhhhh
Confidence 455677999999764 66777778899999999999999998631 2221 133 55444431 0
Q ss_pred -------ccchhhhhHHHHHHHH----HHHHHHHHHHHhcCCCcEEEEcCCCccchheecccCceeeccccccccccchh
Q 046633 71 -------LPRHFFYRLHALCAYL----RCLFVALCVLLRSSSYDVIIADQVSVVIPVLKLRSSTKVFMLNIARYMQILEL 139 (176)
Q Consensus 71 -------lPr~i~gr~~alcA~l----R~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l~l~~~~~vlf~~~~~YcHFPd~ 139 (176)
+|+........+...+ ......+.-.+++.+||+|++|..+.+-++.....+.|++. ++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~-----~~~~~~~ 156 (398)
T 4fzr_A 82 REGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIE-----QSIRLAS 156 (398)
T ss_dssp TTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEE-----ECCSSCC
T ss_pred ccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEE-----eccCCCC
Confidence 1111101111111111 11111122234567899999997555445554444567776 7776643
No 14
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=98.18 E-value=3.7e-06 Score=71.03 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=33.6
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..+++|||+|+-+. .+|-..-++.+|.+|+++||+|+++|.
T Consensus 16 ~~~~~MrIl~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~ 56 (398)
T 3oti_A 16 IEGRHMRVLFVSSP--GIGHLFPLIQLAWGFRTAGHDVLIAVA 56 (398)
T ss_dssp ---CCCEEEEECCS--SHHHHGGGHHHHHHHHHTTCEEEEEES
T ss_pred hhhhcCEEEEEcCC--CcchHhHHHHHHHHHHHCCCEEEEecc
Confidence 44567999999765 677777788999999999999999997
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=98.16 E-value=6.3e-06 Score=69.98 Aligned_cols=41 Identities=20% Similarity=0.300 Sum_probs=32.9
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++|||+|+ + .+.+|..+-++.+|++|+++||+|+++|...
T Consensus 5 m~m~kIl~~-~-~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~ 45 (430)
T 2iyf_A 5 TTPAHIAMF-S-IAAHGHVNPSLEVIRELVARGHRVTYAIPPV 45 (430)
T ss_dssp ---CEEEEE-C-CSCHHHHGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred cccceEEEE-e-CCCCccccchHHHHHHHHHCCCeEEEEeCHH
Confidence 346899987 4 3678888889999999999999999998763
No 16
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=98.06 E-value=1.1e-05 Score=66.93 Aligned_cols=113 Identities=16% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccc--cCCceeEEEeCCcccc----------h
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEET--VNGTFPVTVYGDFLPR----------H 74 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et--~~G~l~V~v~Gd~lPr----------~ 74 (176)
+||||+|+-.. ..|-=.-++.+|++|+++||+|+++|... +.+. ..| +++...+..+|. +
T Consensus 3 ~M~~il~~~~~--~~Ghv~~~~~La~~L~~~GheV~v~~~~~-----~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 3 RQRHILFANVQ--GHGHVYPSLGLVSELARRGHRITYVTTPL-----FADEVKAAG-AEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CCCEEEEECCS--SHHHHHHHHHHHHHHHHTTCEEEEEECHH-----HHHHHHHTT-CEEEECCCGGGTSSSSSSSCCTT
T ss_pred CCCEEEEEeCC--CCcccccHHHHHHHHHhCCCEEEEEcCHH-----HHHHHHHcC-CEEEecccccccccccccccccc
Confidence 46699988654 44555566799999999999999999642 2221 234 666665543321 1
Q ss_pred hhhhHHH-HHHHHHHHHHHHHHHHhcCCCcEEEEc-CCCccchheecccCceeec
Q 046633 75 FFYRLHA-LCAYLRCLFVALCVLLRSSSYDVIIAD-QVSVVIPVLKLRSSTKVFM 127 (176)
Q Consensus 75 i~gr~~a-lcA~lR~l~~~~~~~~~~~~~DVvi~D-qvs~~iP~l~l~~~~~vlf 127 (176)
....+.. +....+.....+.-.+...+||+|++| ..+.+.++.....+-|+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~ 129 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVR 129 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEE
Confidence 1111111 112212222222223456799999999 5544344443334556666
No 17
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=97.95 E-value=2.3e-05 Score=66.00 Aligned_cols=114 Identities=20% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccc--cCCceeEEEeCCcccch---------
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEET--VNGTFPVTVYGDFLPRH--------- 74 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et--~~G~l~V~v~Gd~lPr~--------- 74 (176)
.+||||+|+-.. ..|-=.-++.+|++|+++||+|+++|... +.+. ..| +++...+..+|..
T Consensus 18 ~~m~rIl~~~~~--~~GHv~p~l~La~~L~~~Gh~V~v~~~~~-----~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 18 RHMAHLLIVNVA--SHGLILPTLTVVTELVRRGHRVSYVTAGG-----FAEPVRAAG-ATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp -CCCEEEEECCS--CHHHHGGGHHHHHHHHHTTCEEEEEECGG-----GHHHHHHTT-CEEEECCCSTTTCCHHHHHHSS
T ss_pred ccCCEEEEEeCC--CccccccHHHHHHHHHHCCCEEEEEeCHH-----HHHHHHhcC-CEEEeccccccccccchhhccc
Confidence 467899988753 55655667799999999999999999431 2221 234 6666665433321
Q ss_pred -hhhhHHH-HHHHHHHHHHHHHHHHhcCCCcEEEEc-CCCccchheecccCceeec
Q 046633 75 -FFYRLHA-LCAYLRCLFVALCVLLRSSSYDVIIAD-QVSVVIPVLKLRSSTKVFM 127 (176)
Q Consensus 75 -i~gr~~a-lcA~lR~l~~~~~~~~~~~~~DVvi~D-qvs~~iP~l~l~~~~~vlf 127 (176)
....+.. +....+.....+.-.++..+||+|++| ..+.+.++.....+-|++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~ 145 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVR 145 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEE
Confidence 1111111 111111111122223456789999999 6554445544334556666
No 18
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.93 E-value=2.9e-05 Score=64.74 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=56.1
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc-hhhhhHHHHHHHHHHHHHHHHHHHh
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR-HFFYRLHALCAYLRCLFVALCVLLR 98 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr-~i~gr~~alcA~lR~l~~~~~~~~~ 98 (176)
.||+|+.+.++|++|+++||+|+++|...+.. ..+..+| +.+.... .++ ..+.+........+++. . .++
T Consensus 26 ~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~~~-i~~~~~~--~~~~~~~~~~~~~~~~~~~l~---~-~l~ 96 (394)
T 2jjm_A 26 VGGSGVVGTELGKQLAERGHEIHFITSGLPFR--LNKVYPN-IYFHEVT--VNQYSVFQYPPYDLALASKMA---E-VAQ 96 (394)
T ss_dssp -CHHHHHHHHHHHHHHHTTCEEEEECSSCC------CCCTT-EEEECCC--CC----CCSCCHHHHHHHHHH---H-HHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc--ccccCCc-eEEEecc--cccccccccccccHHHHHHHH---H-HHH
Confidence 89999999999999999999999999753211 1233333 4444322 111 01111000111122222 1 235
Q ss_pred cCCCcEEEEcCCCc-cch--heeccc--Cceeeccccccccccchh
Q 046633 99 SSSYDVIIADQVSV-VIP--VLKLRS--STKVFMLNIARYMQILEL 139 (176)
Q Consensus 99 ~~~~DVvi~Dqvs~-~iP--~l~l~~--~~~vlf~~~~~YcHFPd~ 139 (176)
+.+||||++..... ..+ +.+.+. +.|+++ .+|-.+.
T Consensus 97 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~-----~~h~~~~ 137 (394)
T 2jjm_A 97 RENLDILHVHYAIPHAICAYLAKQMIGERIKIVT-----TLHGTDI 137 (394)
T ss_dssp HHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEE-----ECCHHHH
T ss_pred HcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEE-----EEecCcc
Confidence 56899999754321 111 122222 478888 8887654
No 19
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=97.83 E-value=7.6e-05 Score=63.44 Aligned_cols=41 Identities=17% Similarity=0.209 Sum_probs=32.6
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++|||+|+ | .+..|==.-.+.+|.+|+++||+|+++|...
T Consensus 10 m~~~~Il~~-~-~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~ 50 (424)
T 2iya_A 10 VTPRHISFF-N-IPGHGHVNPSLGIVQELVARGHRVSYAITDE 50 (424)
T ss_dssp -CCCEEEEE-C-CSCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred cccceEEEE-e-CCCCcccchHHHHHHHHHHCCCeEEEEeCHH
Confidence 356899997 3 3456777778899999999999999999753
No 20
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=97.81 E-value=7.3e-05 Score=62.44 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=33.2
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+|+-.. .+|-..-++.+|.+|+++||+|++++..
T Consensus 1 ~MrIl~~~~~--~~gh~~~~~~la~~L~~~GheV~v~~~~ 38 (391)
T 3tsa_A 1 HMRVLVVPLP--YPTHLMAMVPLCWALQASGHEVLIAAPP 38 (391)
T ss_dssp CCEEEEECCS--CHHHHHTTHHHHHHHHHTTCEEEEEECH
T ss_pred CcEEEEEcCC--CcchhhhHHHHHHHHHHCCCEEEEecCh
Confidence 4899998875 7788888899999999999999999853
No 21
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.78 E-value=0.00015 Score=60.55 Aligned_cols=37 Identities=14% Similarity=0.208 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++ +. +.+|-..-++.+|++|+++||+|++++..
T Consensus 1 MrIl~~-~~-~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~ 37 (384)
T 2p6p_A 1 MRILFV-AA-GSPATVFALAPLATAARNAGHQVVMAANQ 37 (384)
T ss_dssp CEEEEE-CC-SSHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CEEEEE-eC-CccchHhHHHHHHHHHHHCCCEEEEEeCH
Confidence 689998 33 56889999999999999999999999865
No 22
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=97.66 E-value=0.0004 Score=57.82 Aligned_cols=39 Identities=21% Similarity=0.075 Sum_probs=28.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.|||+|+ |. +..|==.=++.+|++|+++||+|+++|..
T Consensus 21 ~~MRIL~~-~~-p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~ 59 (400)
T 4amg_A 21 QSMRALFI-TS-PGLSHILPTVPLAQALRALGHEVRYATGG 59 (400)
T ss_dssp CCCEEEEE-CC-SSHHHHGGGHHHHHHHHHTTCEEEEEECS
T ss_pred CCCeEEEE-CC-CchhHHHHHHHHHHHHHHCCCEEEEEeCc
Confidence 56999987 32 22232233568999999999999999864
No 23
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.64 E-value=4.4e-05 Score=63.90 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=35.7
Q ss_pred ceEEEEeCCC-CCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHPDL-GIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdL-giGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
|||+++.|.. ..||+|+++.++|++|+++ |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 7999998866 4699999999999999999 99999997644
No 24
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.48 E-value=6.1e-05 Score=65.73 Aligned_cols=44 Identities=5% Similarity=0.091 Sum_probs=38.3
Q ss_pred cCCCceEEEEeCCCCCC---chHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 5 RSSKLNVAIIHPDLGIG---GAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiG---GAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.++|||+++.|.+.-| |+++.+.++|++|+++||+|+++|...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 35679999999999754 777889999999999999999999763
No 25
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.42 E-value=0.00071 Score=58.13 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=32.3
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+..+|||+|+ ..|.+|==.-.+.+|++|+++||+|++++..
T Consensus 17 ~~~~mrIl~~--~~~~~GHv~p~l~la~~L~~~GheV~~~~~~ 57 (441)
T 2yjn_A 17 RGSHMRVVFS--SMASKSHLFGLVPLAWAFRAAGHEVRVVASP 57 (441)
T ss_dssp --CCCEEEEE--CCSCHHHHTTTHHHHHHHHHTTCEEEEEECG
T ss_pred cCCccEEEEE--cCCCcchHhHHHHHHHHHHHCCCeEEEEeCc
Confidence 4467999999 3356676666789999999999999999964
No 26
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.34 E-value=0.00042 Score=60.84 Aligned_cols=43 Identities=16% Similarity=0.192 Sum_probs=39.2
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHH--HHHCCCeEEEEEeec
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVE--LVSHGHNVHVFTAHH 48 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~--l~~~Gh~V~l~T~~~ 48 (176)
.++|||+++.++++.||+|+++.+++++ +.+.||+|++++...
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~ 247 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATSG 247 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESSC
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECCC
Confidence 4679999999999999999999999999 888999999998753
No 27
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=96.61 E-value=0.0074 Score=51.85 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=27.1
Q ss_pred CCceEEEEeCC-C--CCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPD-L--GIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpd-L--giGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+++.+. . +.+|. ...++++|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p~~~~~~---~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFRTPRRAN---IHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTTSSSCCH---HHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCCChhhhh---HhHHHHHHHhCC-ceEEEEec
Confidence 46999999876 3 33443 346788888999 99999643
No 28
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=96.53 E-value=0.0055 Score=52.04 Aligned_cols=37 Identities=19% Similarity=0.190 Sum_probs=29.5
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+|+ + .|.+|==.-.+.+|++|+++||+|+++|..
T Consensus 1 MrIl~~-~-~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~ 37 (416)
T 1rrv_A 1 MRVLLS-V-CGTRGDVEIGVALADRLKALGVQTRMCAPP 37 (416)
T ss_dssp CEEEEE-E-ESCHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEE-e-cCCCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 689888 3 335565556679999999999999999975
No 29
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=96.39 E-value=0.012 Score=49.91 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||+|+ | .|.+|==.-.+.+|.+|+++||+|+++|+..
T Consensus 1 M~Il~~-~-~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~ 38 (415)
T 1iir_A 1 MRVLLA-T-CGSRGDTEPLVALAVRVRDLGADVRMCAPPD 38 (415)
T ss_dssp CEEEEE-C-CSCHHHHHHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CeEEEE-c-CCCchhHHHHHHHHHHHHHCCCeEEEEcCHH
Confidence 688887 4 3556666667899999999999999999764
No 30
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=96.26 E-value=0.0097 Score=50.59 Aligned_cols=103 Identities=22% Similarity=0.186 Sum_probs=53.9
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC-CcccccccCCceeEEEeC-Ccccc-hhhhhHHHHHHH
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK-RRCFEETVNGTFPVTVYG-DFLPR-HFFYRLHALCAY 85 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~-~hcF~Et~~G~l~V~v~G-d~lPr-~i~gr~~alcA~ 85 (176)
+||++. .=|-||==.=.+.+|++|+++||+|.++++.... ..-.++ .| ++++..- .-+++ .....+..++..
T Consensus 3 ~~i~i~--~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--~g-~~~~~i~~~~~~~~~~~~~~~~~~~~ 77 (365)
T 3s2u_A 3 GNVLIM--AGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--AG-LPLHLIQVSGLRGKGLKSLVKAPLEL 77 (365)
T ss_dssp CEEEEE--CCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--GT-CCEEECC--------------CHHHH
T ss_pred CcEEEE--cCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--cC-CcEEEEECCCcCCCCHHHHHHHHHHH
Confidence 467763 2133442222578999999999999999865221 000011 12 3333211 01232 122334445555
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCccchhe
Q 046633 86 LRCLFVALCVLLRSSSYDVIIADQVSVVIPVL 117 (176)
Q Consensus 86 lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l 117 (176)
++-++.+++ ++++.+||+|+.|....+.|..
T Consensus 78 ~~~~~~~~~-~l~~~~PDvVi~~g~~~s~p~~ 108 (365)
T 3s2u_A 78 LKSLFQALR-VIRQLRPVCVLGLGGYVTGPGG 108 (365)
T ss_dssp HHHHHHHHH-HHHHHCCSEEEECSSSTHHHHH
T ss_pred HHHHHHHHH-HHHhcCCCEEEEcCCcchHHHH
Confidence 666655544 4577799999999876676653
No 31
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=96.13 E-value=0.023 Score=48.36 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.2
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+|+-.. ..|-=.=++.+|.+|+++||+|+++|..
T Consensus 1 MrIli~~~g--t~Ghv~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 1 MGVLITGCG--SRGDTEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp -CEEEEEES--SHHHHHHHHHHHHHHHHTTCCEEEEECG
T ss_pred CeEEEEeCC--CCccHHHHHHHHHHHHHCCCeEEEEeCH
Confidence 688877433 3444444568999999999999999864
No 32
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.73 E-value=0.013 Score=53.00 Aligned_cols=49 Identities=20% Similarity=0.429 Sum_probs=36.8
Q ss_pred Cccc-cCCCceEEEEeCCC----CCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 1 MEQR-RSSKLNVAIIHPDL----GIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 1 m~~~-~~~~~kI~~~hpdL----giGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
||+. +...|||+|+-+.. -.||--.++-.|+.+|+++||+|.+++..++
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~ 54 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYD 54 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCS
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCch
Confidence 4443 34569999997654 3699999999999999999999999997543
No 33
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=95.58 E-value=0.028 Score=49.58 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=29.9
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|....+++++|+++ |-. ..|==--++.+|+.|+++||+|+++|+..
T Consensus 1 ~~~~~~~~~~vl~~-p~p-~~GHi~P~l~La~~L~~rG~~VT~v~t~~ 46 (482)
T 2pq6_A 1 MGNFANRKPHVVMI-PYP-VQGHINPLFKLAKLLHLRGFHITFVNTEY 46 (482)
T ss_dssp -------CCEEEEE-CCS-SHHHHHHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCcccCCCCEEEEe-cCc-cchhHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 44444455677766 432 35555667899999999999999999864
No 34
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=95.53 E-value=0.11 Score=50.23 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=32.7
Q ss_pred CCceEEEEeCCC-----------CCCchHHHHHH--------HHHHHHHCCCeEE----EEEeec
Q 046633 7 SKLNVAIIHPDL-----------GIGGAERLIVD--------AAVELVSHGHNVH----VFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdL-----------giGGAERlvvd--------lA~~l~~~Gh~V~----l~T~~~ 48 (176)
..++|+++.|.- -.||-+..|++ +|.+|+++||+|+ ++|...
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~ 341 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLL 341 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECC
T ss_pred ceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCC
Confidence 347899987642 15999999995 7777788999887 888764
No 35
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=95.12 E-value=0.14 Score=38.63 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=52.6
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcc-cccccCCceeEEEeCCcccchhhhhHHHHHHHHH
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRC-FEETVNGTFPVTVYGDFLPRHFFYRLHALCAYLR 87 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hc-F~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA~lR 87 (176)
|||..+...-|+=|---+.+++|..|+++|++|.++-.....+-. +.+..+..+++...+. ..++
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~--------------~~l~ 66 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS--------------EKDV 66 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS--------------HHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc--------------HHHH
Confidence 566666666677788999999999999999999998654322211 1222233355554432 1122
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCCCc
Q 046633 88 CLFVALCVLLRSSSYDVIIADQVSV 112 (176)
Q Consensus 88 ~l~~~~~~~~~~~~~DVvi~Dqvs~ 112 (176)
.+... ...+||+||+|--+.
T Consensus 67 ~~l~~-----l~~~yD~viiD~~~~ 86 (206)
T 4dzz_A 67 YGIRK-----DLADYDFAIVDGAGS 86 (206)
T ss_dssp HTHHH-----HTTTSSEEEEECCSS
T ss_pred HHHHH-----hcCCCCEEEEECCCC
Confidence 22111 235699999997543
No 36
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=94.24 E-value=0.22 Score=43.83 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=30.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~~ 48 (176)
++++|+++ |-. ..|==.=++++|+.|+++ ||+|+++|+..
T Consensus 8 ~~~~vv~~-p~p-~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 8 KNSELIFI-PAP-GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp HCEEEEEE-CCS-STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCCEEEEE-cCc-ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 45677766 554 455556677999999999 99999998764
No 37
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=94.12 E-value=0.4 Score=42.48 Aligned_cols=39 Identities=33% Similarity=0.274 Sum_probs=29.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~ 48 (176)
+++|+++ |- +..|==.-++.+|++|+++ ||+|+++|...
T Consensus 6 ~~~vl~~-p~-p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 6 TPHVAII-PS-PGMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp CCEEEEE-CC-SCHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CcEEEEe-cC-cchhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4676666 43 3455556678999999998 99999999764
No 38
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=92.78 E-value=0.73 Score=37.62 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=32.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++||..+. .-|+=|---+++++|.+|+++|+.|.++-...
T Consensus 39 ~~~~vI~v~-~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 39 TGAKVFAVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp -CCEEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CCceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345555555 56777889999999999999999999997653
No 39
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=91.35 E-value=0.86 Score=38.87 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=34.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|+..+...-|+=|---+++++|.+|+++|++|.++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 45677777776777789999999999999999999998754
No 40
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=90.55 E-value=0.15 Score=41.88 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=26.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~ 46 (176)
.||||+++.......|+ +..++.+|.++ ||+|.++++
T Consensus 4 ~mmkIl~v~~~~~~~~~---~~~l~~~L~~~~g~~v~~~~~ 41 (376)
T 1v4v_A 4 GMKRVVLAFGTRPEATK---MAPVYLALRGIPGLKPLVLLT 41 (376)
T ss_dssp CCEEEEEEECSHHHHHH---HHHHHHHHHTSTTEEEEEEEC
T ss_pred CceEEEEEEeccHHHHH---HHHHHHHHHhCCCCceEEEEc
Confidence 46899999865422222 35778899998 899877654
No 41
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=89.99 E-value=1.7 Score=36.21 Aligned_cols=41 Identities=12% Similarity=0.056 Sum_probs=33.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.|+..+...-|.=|.--+.+++|..|++.|..|.++-...
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 44666666666667889999999999999999999996543
No 42
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=88.25 E-value=0.23 Score=40.34 Aligned_cols=38 Identities=18% Similarity=0.105 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-C-CeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-G-HNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-G-h~V~l~T~~ 47 (176)
++|||+++....+-+|+ +..++.+|+++ | |+|.++++.
T Consensus 7 ~~mkIl~v~~~~~~~~~---~~~l~~~L~~~~~~~~v~~~~~~ 46 (375)
T 3beo_A 7 ERLKVMTIFGTRPEAIK---MAPLVLELQKHPEKIESIVTVTA 46 (375)
T ss_dssp SCEEEEEEECSHHHHHH---HHHHHHHHTTCTTTEEEEEEECC
T ss_pred cCceEEEEecCcHHHHH---HHHHHHHHHhCCCCCCeEEEEcC
Confidence 45899999865432222 33667777776 4 888766643
No 43
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=87.35 E-value=2.5 Score=37.08 Aligned_cols=43 Identities=14% Similarity=0.223 Sum_probs=26.3
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeE--EEEEe
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNV--HVFTA 46 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V--~l~T~ 46 (176)
|+. .+++++|+++ |-. ..|==.-++++|+.|+++||+| +++++
T Consensus 1 m~~-~~~~~hvv~~-p~p-~~GHi~P~l~la~~L~~rGh~v~vt~~~t 45 (456)
T 2c1x_A 1 MSQ-TTTNPHVAVL-AFP-FSTHAAPLLAVVRRLAAAAPHAVFSFFST 45 (456)
T ss_dssp -------CCEEEEE-CCC-SSSSHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred CCC-CCCCCEEEEE-cCc-ccchHHHHHHHHHHHHhCCCCeEEEEEeC
Confidence 554 3345677665 553 4566667889999999998776 54554
No 44
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=87.10 E-value=1 Score=34.16 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=34.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+||||+++.-+. .|..|+++-.++..+.+.|++|.++....
T Consensus 4 ~M~kilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 4 SSPYILVLYYSR-HGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp -CCEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CcceEEEEEeCC-CChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 467998887774 68899999999999999999999887653
No 45
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=85.74 E-value=1.1 Score=34.02 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=33.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+||||+++.-+ -|..|+++-.++.++.+.|++|.++...
T Consensus 3 ~mmkilii~~S--~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG--YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC--SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC--ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 46899988888 7889999999999999999999988664
No 46
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=85.46 E-value=1.6 Score=33.62 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=34.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||+++.-+. .|..++++-.++.++.+.|++|.++....
T Consensus 5 ~mmkilii~~S~-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 5 APVKLAIVFYSS-TGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp CCCEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCeEEEEEECC-CChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 478999887776 68899999999999999999999887653
No 47
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=85.22 E-value=1.2 Score=32.33 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=32.2
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||||+++--+ .-|.+|+++-.+|..+.+.|++|.++...
T Consensus 1 M~ki~I~y~S-~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGS-STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEEC-SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEEC-CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 3678777655 37999999999999999999999988765
No 48
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=84.00 E-value=0.98 Score=38.22 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=26.8
Q ss_pred EEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 12 AIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 12 ~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
..+|.- ..|.++.+..++++|.++| +|.+.+..
T Consensus 43 iwih~~--s~G~~~~~~~L~~~L~~~~-~v~v~~~~ 75 (374)
T 2xci_A 43 LWVHTA--SIGEFNTFLPILKELKREH-RILLTYFS 75 (374)
T ss_dssp EEEECS--SHHHHHHHHHHHHHHHHHS-CEEEEESC
T ss_pred EEEEcC--CHHHHHHHHHHHHHHHhcC-CEEEEEcC
Confidence 567775 5788999999999999999 88766554
No 49
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=82.47 E-value=2.5 Score=32.91 Aligned_cols=40 Identities=15% Similarity=0.145 Sum_probs=33.2
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+||..+...-|+=|.--+++++|.+|+++|+.|.++-...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 5677776666777899999999999999999999986553
No 50
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=82.05 E-value=2.3 Score=34.51 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=33.2
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|+|+..+...-|.=|---+.+++|.+|+++|++|.++=...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 56777777666777899999999999999999999885543
No 51
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=81.69 E-value=2.8 Score=31.03 Aligned_cols=40 Identities=18% Similarity=0.079 Sum_probs=29.6
Q ss_pred CCceEEEEeCCCCCCchHH--HHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAER--LIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAER--lvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|++|+..+ |.=+.|| ....+|++.++.||+|.++-..
T Consensus 14 ~~~kl~ii~~s-gP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 14 QXXXILIVVTH-GPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCCEEEEEECC-CGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccceEEEEEcc-CCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45789998887 2114554 5677888889999999988755
No 52
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=81.29 E-value=2 Score=33.11 Aligned_cols=42 Identities=14% Similarity=0.047 Sum_probs=33.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~ 48 (176)
+++||..+...-|+=|.--+.+++|.+|+++ |+.|.++-...
T Consensus 2 ~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 2 NAKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp -CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 3566666666667778899999999999999 99999997653
No 53
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=81.26 E-value=3.1 Score=31.93 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|+..+...-|.=|.--+.+++|.+|+++|++|.++-..
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 466666666676788999999999999999999998654
No 54
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=81.07 E-value=2.5 Score=35.43 Aligned_cols=108 Identities=17% Similarity=0.243 Sum_probs=70.2
Q ss_pred ceEEEEe---CCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccchhhhhHHHHHHH
Q 046633 9 LNVAIIH---PDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPRHFFYRLHALCAY 85 (176)
Q Consensus 9 ~kI~~~h---pdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA~ 85 (176)
|||+|.- |+.|.|=--|.. .+|++|+ +|.+++... +++-.++. | .+|..... ...
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl-~LA~~l~----~v~F~~~~~-~~~~~~~~--g-~~v~~l~~---~d~---------- 58 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDL-VLAKQYS----DVSFACLPL-EGSLIDEI--P-YPVYELSS---ESI---------- 58 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHH-HHHTTCS----SEEEEECCC-TTCCGGGC--C-SCEEECSS---SCH----------
T ss_pred CEEEEEEecCCCccccHHHHHH-HHHHHHH----hCEEEEecC-cHhHHHHC--C-CeEEEcCc---cCH----------
Confidence 5677654 556777778877 7888888 899887654 33333333 3 66665431 011
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEcCCCccchheeccc---Cceeeccccccccccchhhccc
Q 046633 86 LRCLFVALCVLLRSSSYDVIIADQVSVVIPVLKLRS---STKVFMLNIARYMQILELLLFE 143 (176)
Q Consensus 86 lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP~l~l~~---~~~vlf~~~~~YcHFPd~Ll~~ 143 (176)
..+.. .+...++|++|+|.........+.+. ..|+++.-|..--|+-|.++-+
T Consensus 59 -~~~~~----~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~~~~~~Dllin~ 114 (282)
T 3hbm_A 59 -YELIN----LIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIKPHHCDILLNV 114 (282)
T ss_dssp -HHHHH----HHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSCCCCCCSEEEEC
T ss_pred -HHHHH----HHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCCCcccCCEEEeC
Confidence 11111 12345899999999988777777542 4688888888778888888775
No 55
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=81.00 E-value=1.6 Score=35.59 Aligned_cols=35 Identities=9% Similarity=0.040 Sum_probs=23.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCC-eEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGH-NVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh-~V~l~T~ 46 (176)
|||+++-... .+ -..+..++++|+++|+ +|.++.+
T Consensus 1 mkIl~v~~~~--~~-~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVFGTR--PE-AIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEECSH--HH-HHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred CeEEEEeccc--HH-HHHHHHHHHHHHhCCCCceEEEEc
Confidence 6898875431 11 2335689999999995 8876543
No 56
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=80.90 E-value=1.5 Score=33.61 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=30.8
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||+| -. -|+=|.--+++++|.+|+++|++|.++-...
T Consensus 1 mkI~v-s~-kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAV-AG-KGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEE-EC-SSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEE-ec-CCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68888 43 4555778899999999999999999987654
No 57
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=80.90 E-value=13 Score=29.81 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=56.4
Q ss_pred EEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC-----CcccccccCCceeEEEeCC-cccch-hhhhHHHHHH
Q 046633 12 AIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK-----RRCFEETVNGTFPVTVYGD-FLPRH-FFYRLHALCA 84 (176)
Q Consensus 12 ~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~-----~hcF~Et~~G~l~V~v~Gd-~lPr~-i~gr~~alcA 84 (176)
+.++.+-| =|=-..+.-+|.+.+.+|+.|.++..-... ...++.. + +++...|. |.-+. -... --+
T Consensus 31 i~v~tG~G-kGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L--~-v~~~~~g~gf~~~~~~~~~---~~~ 103 (196)
T 1g5t_A 31 IIVFTGNG-KGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH--G-VEFQVMATGFTWETQNREA---DTA 103 (196)
T ss_dssp EEEEESSS-SCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG--T-CEEEECCTTCCCCGGGHHH---HHH
T ss_pred EEEECCCC-CCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC--C-cEEEEcccccccCCCCcHH---HHH
Confidence 34444434 677788888899999999999999654321 1223333 2 77888887 32111 1000 112
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCCCccch
Q 046633 85 YLRCLFVALCVLLRSSSYDVIIADQVSVVIP 115 (176)
Q Consensus 85 ~lR~l~~~~~~~~~~~~~DVvi~Dqvs~~iP 115 (176)
..+.-|....-.+.+.+||++|.|.+..+++
T Consensus 104 ~a~~~l~~a~~~l~~~~yDlvILDEi~~al~ 134 (196)
T 1g5t_A 104 ACMAVWQHGKRMLADPLLDMVVLDELTYMVA 134 (196)
T ss_dssp HHHHHHHHHHHHTTCTTCSEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeCCCcccc
Confidence 2233333333334567899999999866544
No 58
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=80.46 E-value=2.8 Score=31.53 Aligned_cols=39 Identities=18% Similarity=0.087 Sum_probs=32.5
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHH-CCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVS-HGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~-~Gh~V~l~T~~ 47 (176)
||||+++.-+ ..|..|+++-.++..+.+ .|++|.++...
T Consensus 1 Mmkilii~~S-~~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYS-MYGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECC-SSSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeC-CCcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 4688888777 468899999999999998 99999998765
No 59
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=80.31 E-value=3 Score=31.32 Aligned_cols=38 Identities=24% Similarity=0.190 Sum_probs=31.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++--+. -|.+|+++-.+|.++.+.|.+|.++...
T Consensus 1 Mkv~IvY~S~-tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLSD-YGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECTT-STTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEECC-ChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 5777776664 5999999999999999999999888654
No 60
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=79.99 E-value=3.4 Score=32.88 Aligned_cols=41 Identities=17% Similarity=0.162 Sum_probs=33.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|+..+...-|.=|---+++++|.+|+++|++|.++-..
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45677777766677788899999999999999999988654
No 61
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=79.79 E-value=2.1 Score=34.27 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=28.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR 51 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~ 51 (176)
|||++ .||+=.+=-.++.+|.++||+|+.++-+.++.
T Consensus 1 MkILV------TGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 1 MRVLV------GGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp CEEEE------ETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred CEEEE------ECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 67765 36666777889999999999999987654443
No 62
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=79.61 E-value=13 Score=33.09 Aligned_cols=38 Identities=11% Similarity=0.018 Sum_probs=28.5
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCC--CeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHG--HNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G--h~V~l~T~~ 47 (176)
+.+| ++.|-.+.|=. -=++++|+.|+++| +.|+++|+.
T Consensus 13 ~~hv-v~~P~p~~GHi-~P~l~Lak~L~~~g~~~~vT~~~t~ 52 (454)
T 3hbf_A 13 LLHV-AVLAFPFGTHA-APLLSLVKKIATEAPKVTFSFFCTT 52 (454)
T ss_dssp CCEE-EEECCCSSSSH-HHHHHHHHHHHHHCTTSEEEEEECH
T ss_pred CCEE-EEEcCCcccHH-HHHHHHHHHHHhCCCCEEEEEEeCH
Confidence 3455 55577666654 34569999999999 999999975
No 63
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=78.74 E-value=2.5 Score=33.51 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=32.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+||+..+...-|.=|---+++++|.+|+++|++|.++-...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45666665555666788899999999999999999986543
No 64
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=78.20 E-value=3.4 Score=32.46 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=31.0
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|+..+...-|.=|.--+++++|.+|+++|++|.++-..
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 455555555566688899999999999999999998654
No 65
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=78.08 E-value=3.7 Score=32.03 Aligned_cols=48 Identities=23% Similarity=0.155 Sum_probs=35.9
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
||. +++..+|+++.|++...--.+++-.+..++.++|+++.++....+
T Consensus 1 ~s~-~~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 48 (276)
T 3jy6_A 1 MSL-TQSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDANAD 48 (276)
T ss_dssp -----CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECTTC
T ss_pred CCc-CCCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 565 445678999999986666677887888888999999999876644
No 66
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=77.68 E-value=3.6 Score=31.29 Aligned_cols=40 Identities=18% Similarity=0.149 Sum_probs=33.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHH-CCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVS-HGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~-~Gh~V~l~T~~ 47 (176)
.||||+++.-+ ..|..|+++-.++..+.+ .|++|.++...
T Consensus 3 ~M~kiliiy~S-~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 3 AMGKVLVIYDT-RTGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CCEEEEEEECC-SSSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCCEEEEEEEC-CCcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 46789888777 568899999999999999 99999988654
No 67
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=77.14 E-value=11 Score=27.87 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=29.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||+++..+ |=.+-=+......|.+.|++|.+++...
T Consensus 1 ~~~ki~il~~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 1 ASMKVLFLSAD---GFEDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCCEEEEECCT---TBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCC---CccHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 35799999887 4444446677888999999999998753
No 68
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=77.12 E-value=4.1 Score=29.68 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=29.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
|||+++--+ .-|.+|+++-.+|.++.+.|++|.++.
T Consensus 2 ~ki~I~Y~S-~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISGS-TLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECCT-TSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEEC-CchHHHHHHHHHHHHHHHCCCceEEec
Confidence 567666544 459999999999999999999998764
No 69
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=76.95 E-value=3 Score=30.10 Aligned_cols=38 Identities=24% Similarity=0.162 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++--+. -|.+|+++-.+|..+.+.|++|.++...
T Consensus 1 mki~iiy~S~-~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGST-TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEECS-SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEECC-cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 5777666553 4899999999999999999999888654
No 70
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=76.90 E-value=3.5 Score=34.98 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=29.6
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCc
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRR 52 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~h 52 (176)
|+..++++|||++-=-| |+ ..-=+-.|+++|++ +|+|+++....+.+-
T Consensus 4 ~~~~~~~~m~ILlTNDD-Gi--~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDD-GV--YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -------CCEEEEECSS-CT--TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hhhccCCCCeEEEEcCC-CC--CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 55566778998665444 55 33446688889888 899999998766543
No 71
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=76.68 E-value=11 Score=31.55 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=48.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC---cccccccCCceeEEEeCCcccchhhhhHHHHHH
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR---RCFEETVNGTFPVTVYGDFLPRHFFYRLHALCA 84 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~---hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA 84 (176)
+|||++-=-| |+ ..-=+-.|+++|++.| +|+++....+.+ |++.-. ..+.+....+-++-.+-| .
T Consensus 1 ~M~ILlTNDD-Gi--~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~--~pl~~~~~~~~~~~~v~G------T 68 (251)
T 2phj_A 1 MPTFLLVNDD-GY--FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFT--EPLKMRKIDTDFYTVIDG------T 68 (251)
T ss_dssp -CEEEEECSS-CT--TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCS--SCEEEEEEETTEEEETTC------C
T ss_pred CCEEEEECCC-CC--CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecC--CCeEEEEecCCCeEEECC------C
Confidence 4787655444 55 3344668899999998 999999876654 443222 235555443211111222 1
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEE
Q 046633 85 YLRCLFVALCVLLRSSSYDVIIA 107 (176)
Q Consensus 85 ~lR~l~~~~~~~~~~~~~DVvi~ 107 (176)
---++.+++.-++...+||+|+.
T Consensus 69 PaDCV~lal~~l~~~~~PDLVvS 91 (251)
T 2phj_A 69 PADCVHLGYRVILEEKKPDLVLS 91 (251)
T ss_dssp HHHHHHHHHHTTTTTCCCSEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCEEEE
Confidence 12344455443333368999993
No 72
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=76.50 E-value=3 Score=33.90 Aligned_cols=43 Identities=30% Similarity=0.308 Sum_probs=28.2
Q ss_pred cCCCceEEEE--eCCCC--CCchH-HHHHHHHHHHHHCCCeEEEEEee
Q 046633 5 RSSKLNVAII--HPDLG--IGGAE-RLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 5 ~~~~~kI~~~--hpdLg--iGGAE-RlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.++||||+++ ||+.+ -|+.- +++-.++..+.+.||+|.++-..
T Consensus 22 ~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 22 SNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp --CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred cccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 4567898877 67653 34444 44444566677899999987765
No 73
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=76.44 E-value=4 Score=34.39 Aligned_cols=40 Identities=28% Similarity=0.284 Sum_probs=26.9
Q ss_pred CCCceEEEE--eCCCCCCc-hHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAII--HPDLGIGG-AERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~--hpdLgiGG-AERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|||++| ||+ -++ ...+.-.++.++++.||+|+++-.+
T Consensus 20 m~~MKiLII~aHP~--~~S~n~aL~~~~~~~l~~~G~eV~v~DLy 62 (280)
T 4gi5_A 20 FQSMKVLLIYAHPE--PRSLNGALKNFAIRHLQQAGHEVQVSDLY 62 (280)
T ss_dssp --CCEEEEEECCSC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred hhCCeEEEEEeCCC--CccHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 456898766 787 333 2344445667888999999988664
No 74
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=75.62 E-value=5.4 Score=32.43 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=31.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++||++-..+ .-||=+ ..++.+.|++.|++|.++.+..
T Consensus 4 ~k~IllgvTG--aiaa~k-~~~ll~~L~~~g~eV~vv~T~~ 41 (209)
T 3zqu_A 4 PERITLAMTG--ASGAQY-GLRLLDCLVQEEREVHFLISKA 41 (209)
T ss_dssp CSEEEEEECS--SSCHHH-HHHHHHHHHHTTCEEEEEECHH
T ss_pred CCEEEEEEEC--HHHHHH-HHHHHHHHHHCCCEEEEEECcc
Confidence 4689988876 667766 7799999999999999998764
No 75
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=74.89 E-value=7.4 Score=29.24 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=32.5
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+||+++--+. -|..|+++-.+|.++.+.|++|.++...
T Consensus 4 ~~kv~IvY~S~-~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYVSE-YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEECTT-STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEECC-ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 34777776664 5999999999999999999999988665
No 76
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=74.11 E-value=5.6 Score=31.13 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=35.2
Q ss_pred cccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 3 QRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 3 ~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
-++.+..+|+++.|++...=-..++-.+-.++.+.|+++.++....+
T Consensus 3 L~~~~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 49 (291)
T 3egc_A 3 LRSKRSNVVGLIVSDIENVFFAEVASGVESEARHKGYSVLLANTAED 49 (291)
T ss_dssp ----CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CccCCCcEEEEEECCCcchHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 34556678999999977666677777888888999999999876544
No 77
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=73.76 E-value=5.7 Score=30.46 Aligned_cols=40 Identities=10% Similarity=0.026 Sum_probs=32.3
Q ss_pred CceEEEEeCCCCC-CchHHHHHHHHHH-HHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGI-GGAERLIVDAAVE-LVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgi-GGAERlvvdlA~~-l~~~Gh~V~l~T~~ 47 (176)
||||+++.-+..- |-.++++-.++.. +.+.|++|.++-..
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 5799999888753 5577887778888 99999999988765
No 78
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=73.47 E-value=5.8 Score=27.51 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCCCchH--HHHHHHHHHHHHC-CC-eEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAE--RLIVDAAVELVSH-GH-NVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAE--RlvvdlA~~l~~~-Gh-~V~l~T~~ 47 (176)
||++|+..+--- |.| +-..++|.++.++ || +|.++-..
T Consensus 2 ~k~~ii~~~~p~-~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANGAPY-GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECCCTT-TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcCCCC-CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 578888776311 223 3367889999999 99 99888765
No 79
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=73.31 E-value=5.3 Score=31.54 Aligned_cols=41 Identities=17% Similarity=0.089 Sum_probs=33.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++||..+...-|+=|.--+++++|.+|+ +|++|.++-...
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 45677777777677789999999999999 999999986643
No 80
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=73.12 E-value=6.1 Score=32.74 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=32.8
Q ss_pred CCCceEE-EEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVA-IIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~-~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+++|+. ++-|.-|.|-+++..-.+...|.+.|.++.++.+.
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~ 48 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK 48 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 3467776 55676677778888888889999999999988765
No 81
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=73.07 E-value=6.3 Score=30.68 Aligned_cols=49 Identities=14% Similarity=0.067 Sum_probs=34.3
Q ss_pred CccccCCCceEEEEeCCC-CCCchHHHHHHHHHHHHHC-CCeEEEEEeecC
Q 046633 1 MEQRRSSKLNVAIIHPDL-GIGGAERLIVDAAVELVSH-GHNVHVFTAHHD 49 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdL-giGGAERlvvdlA~~l~~~-Gh~V~l~T~~~d 49 (176)
|+-++.+..+|+++.|++ ...=-.+++-.+-.+..+. |++|.+.....+
T Consensus 1 ~~L~~~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~ 51 (304)
T 3gbv_A 1 MSLASNKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYD 51 (304)
T ss_dssp ------CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEEC
T ss_pred CCcccCCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 455666778999999998 6666677777777788888 999999876543
No 82
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=72.91 E-value=2.3 Score=32.02 Aligned_cols=42 Identities=21% Similarity=0.269 Sum_probs=29.4
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
..++|||+++--+ .-|.+|+++-.+|..+.+.|++|.++...
T Consensus 6 ~~~~~ki~I~Y~S-~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 6 AAEMPGITIISAS-QTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp ------CEEEEEC-SSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CCCCCeEEEEEEC-CchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 3455677666544 35999999999999999999999887654
No 83
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=72.49 E-value=7.3 Score=31.78 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=33.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|+..+...-|.=|---+.+++|..|++.|..|.++-..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45677777666566688899999999999999999998654
No 84
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=71.29 E-value=35 Score=27.11 Aligned_cols=41 Identities=10% Similarity=0.045 Sum_probs=28.9
Q ss_pred CceEEEEeCCCC----C----CchH-HHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLG----I----GGAE-RLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLg----i----GGAE-RlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|+||+++..+-+ - =|.| -=++.....|.+.|++|++++...
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 568999998633 1 1333 334456778889999999998754
No 85
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=71.24 E-value=3.1 Score=33.97 Aligned_cols=32 Identities=38% Similarity=0.603 Sum_probs=24.5
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.|||+++ +=|+.| ..+|..|+++|++|+|+-.
T Consensus 1 sm~V~IV--GaGpaG-----l~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 1 SMHVGII--GAGIGG-----TCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CCEEEEE--CCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEE--CcCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 3788887 334445 4789999999999999954
No 86
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=71.13 E-value=7.1 Score=32.51 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=32.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.||+.++...-|+=|---+.+++|.+++++|++|.++....
T Consensus 12 gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 12 GKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp TBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 34555555556677888999999999999999999998654
No 87
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.57 E-value=4.9 Score=32.39 Aligned_cols=41 Identities=17% Similarity=0.117 Sum_probs=33.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+++||++-..+ .+||=...+++.+.|++.|++|.++.+...
T Consensus 6 ~~k~I~lgiTG--s~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 6 AGKHVGFGLTG--SHCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TTCEEEEECCS--CGGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEEEEEC--hHHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 45789998887 566664678999999999999999988754
No 88
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=69.79 E-value=4 Score=30.00 Aligned_cols=38 Identities=8% Similarity=0.209 Sum_probs=29.5
Q ss_pred CCceEEEEeCCCCCCchHH---HHHHHHHHHHHCC--CeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAER---LIVDAAVELVSHG--HNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAER---lvvdlA~~l~~~G--h~V~l~T~~ 47 (176)
..||++|+..+ |=.|. .+...|+...++| |+|.++-.-
T Consensus 6 ~~~K~~ivi~s---~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 6 ANDKLTILWTT---DNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TTSEEEEEECC---CCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred cCCeEEEEEEc---CChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 34899999988 43444 4788899999999 799998753
No 89
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=69.73 E-value=14 Score=28.73 Aligned_cols=46 Identities=13% Similarity=0.083 Sum_probs=35.4
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+.+..+|+++.|++...--..++-.+..++.++|+++.++....++
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 50 (277)
T 3cs3_A 5 RRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVCSGKKSH 50 (277)
T ss_dssp CCCCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEEESTTTT
T ss_pred ccCCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 3455689999999876666777777788888999999987765443
No 90
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=69.66 E-value=8.4 Score=29.94 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=34.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
..+|+++.|++...--..++-.+..++.+.|+++.++....+.
T Consensus 5 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 47 (291)
T 3l49_A 5 GKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDAGRND 47 (291)
T ss_dssp TCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcCCCCH
Confidence 3589999999765555677778888889999999998766543
No 91
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=69.61 E-value=22 Score=27.41 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=27.2
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++||+++..+ |=.+-=+......|.+.|++|.+++...
T Consensus 2 ~~kV~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 2 SASALVCLAP---GSEETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcEEEEEEcC---CCcHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3589998887 2233334456678889999999998754
No 92
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=69.54 E-value=13 Score=30.51 Aligned_cols=41 Identities=15% Similarity=-0.015 Sum_probs=29.9
Q ss_pred CceEEEEeCCCCCCc-hHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGG-AERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGG-AERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
||||+++.-+...+| ..+++-.++.++.+.|++|.++-...
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL~~ 43 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYA 43 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTT
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEccc
Confidence 679988876665555 45555556777888999999988763
No 93
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=69.41 E-value=8.4 Score=30.60 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=30.7
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+||++-..+ .-||- ...++.+.|++.|++|.++.+..
T Consensus 2 k~IllgvTG--s~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 2 QKIALCITG--ASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp CEEEEEECS--STTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEEC--HHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 578888876 66777 56799999999999999998764
No 94
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=68.84 E-value=5.7 Score=31.36 Aligned_cols=39 Identities=23% Similarity=0.155 Sum_probs=32.8
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+||++...+ ..||-+ ..++.+.|++.|++|.++.+....
T Consensus 6 k~IllgvTG--s~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCG--SVNSIN-ISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECS--SGGGGG-HHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeC--HHHHHH-HHHHHHHHHHCCCEEEEEECcCHH
Confidence 589988887 777775 779999999999999999887543
No 95
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=68.50 E-value=10 Score=30.95 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=32.3
Q ss_pred CCCceEEEEeCCCCCCch-HHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGA-ERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGA-ERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+|||+++.-+...+|. ++++-.++.++.+.|++|.++-..
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 456899999988876664 555555777888899999988764
No 96
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=68.32 E-value=2.4 Score=36.36 Aligned_cols=46 Identities=22% Similarity=0.367 Sum_probs=27.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC-cccccccCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR-RCFEETVNG 60 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~-hcF~Et~~G 60 (176)
|+||++| +=|++| ..+|..|+++|++|+++-.+...+ +|-...++|
T Consensus 1 Mk~VvVI--GaG~~G-----L~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G 47 (501)
T 4dgk_A 1 MKPTTVI--GAGFGG-----LALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQG 47 (501)
T ss_dssp CCCEEEE--CCHHHH-----HHHHHHHHHTTCCEEEECCC-------CEEEETT
T ss_pred CCCEEEE--CCcHHH-----HHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCC
Confidence 4567776 333445 468889999999999998775443 333333444
No 97
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=68.10 E-value=26 Score=30.94 Aligned_cols=39 Identities=18% Similarity=0.111 Sum_probs=29.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~ 48 (176)
.++..+. +.|+-|==-++.++|.+++++ |+.|.++....
T Consensus 100 ~~vI~iv-G~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~ 139 (433)
T 2xxa_A 100 PAVVLMA-GLQGAGKTTSVGKLGKFLREKHKKKVLVVSADV 139 (433)
T ss_dssp SEEEEEE-CSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCC
T ss_pred CeEEEEE-CCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCC
Confidence 3444443 456667778899999999999 99999987643
No 98
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=68.04 E-value=8.7 Score=32.90 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=27.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
.+|||+|+ ||. ...+.+.++|.+.||+|..+.+.+|+
T Consensus 21 ~~mrIvf~------G~~-~fa~~~L~~L~~~~~~i~~Vvt~pd~ 57 (329)
T 2bw0_A 21 QSMKIAVI------GQS-LFGQEVYCHLRKEGHEVVGVFTVPDK 57 (329)
T ss_dssp CCCEEEEE------CCH-HHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred CCCEEEEE------cCc-HHHHHHHHHHHHCCCeEEEEEeCCCc
Confidence 34899998 454 45556678888999999877776664
No 99
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=67.60 E-value=8 Score=32.75 Aligned_cols=42 Identities=17% Similarity=0.155 Sum_probs=33.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++||+.++...-|+=|---+.+++|.+++++|++|.++....
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345555666666777888899999999999999999998654
No 100
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=67.49 E-value=7.6 Score=29.09 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=32.0
Q ss_pred CceEEEEeCCCCC--CchHHHHHHHHHHHHHCC--CeEEEEEee
Q 046633 8 KLNVAIIHPDLGI--GGAERLIVDAAVELVSHG--HNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgi--GGAERlvvdlA~~l~~~G--h~V~l~T~~ 47 (176)
||||+++.-+... |-.++++-.++.++.+.| ++|.++-..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4789888777764 667888888899999887 999888765
No 101
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=67.35 E-value=8.3 Score=30.52 Aligned_cols=40 Identities=8% Similarity=-0.081 Sum_probs=31.8
Q ss_pred CceEEEEeCCCCC-CchHHHHHHHHHHHHHC-CCeEEEEEee
Q 046633 8 KLNVAIIHPDLGI-GGAERLIVDAAVELVSH-GHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgi-GGAERlvvdlA~~l~~~-Gh~V~l~T~~ 47 (176)
||||+++.-+... |-.++++-.++.++.+. |++|.++...
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 4789999887765 55777777788889888 9999988755
No 102
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=66.93 E-value=11 Score=29.12 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=36.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR 51 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~ 51 (176)
+..+|+++.|++...=-.+++-.+..++.+.|+++.++... +..
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-~~~ 47 (280)
T 3gyb_A 4 RTQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGYRLSVIDSL-TSQ 47 (280)
T ss_dssp CCCEEEEEESCTTSGGGHHHHHHHHHHHGGGTCEEEEECSS-SSC
T ss_pred ccCEEEEEeCCCCChHHHHHHHHHHHHHHHCCCEEEEEeCC-Cch
Confidence 45689999999877777888888888999999999999887 543
No 103
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=66.86 E-value=14 Score=26.80 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=28.2
Q ss_pred ceEEEEeCCCCCCchH--HHHHHHHHHHHHCCCeE-EEEEee
Q 046633 9 LNVAIIHPDLGIGGAE--RLIVDAAVELVSHGHNV-HVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAE--RlvvdlA~~l~~~Gh~V-~l~T~~ 47 (176)
||++|+..+--. |.| +-..++|.++.++||+| .++-..
T Consensus 1 mk~~iiv~~~p~-~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINEGPY-QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECSCTT-TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeCCCC-CcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 578888766323 333 45689999999999999 888765
No 104
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=66.82 E-value=6.7 Score=30.90 Aligned_cols=30 Identities=3% Similarity=-0.018 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHHHHCCCeEEEEEe-ecCCC
Q 046633 22 GAERLIVDAAVELVSHGHNVHVFTA-HHDKR 51 (176)
Q Consensus 22 GAERlvvdlA~~l~~~Gh~V~l~T~-~~d~~ 51 (176)
|..-+++++|..++++|+.|..+|+ .+..+
T Consensus 88 g~n~~~ie~A~~ake~G~~vIaITs~~~~~~ 118 (170)
T 3jx9_A 88 TERSDLLASLARYDAWHTPYSIITLGDVTET 118 (170)
T ss_dssp SCCHHHHHHHHHHHHHTCCEEEEESSCCCTT
T ss_pred CCCHHHHHHHHHHHHCCCcEEEEeCcchhcc
Confidence 6777889999999999999999999 65543
No 105
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=66.71 E-value=13 Score=29.21 Aligned_cols=48 Identities=6% Similarity=-0.015 Sum_probs=33.6
Q ss_pred CceEEEEeCCCC--CCc-hHHHHHHHHHHHHHC--CCeEEEEEeecCCCcccc
Q 046633 8 KLNVAIIHPDLG--IGG-AERLIVDAAVELVSH--GHNVHVFTAHHDKRRCFE 55 (176)
Q Consensus 8 ~~kI~~~hpdLg--iGG-AERlvvdlA~~l~~~--Gh~V~l~T~~~d~~hcF~ 55 (176)
||||+++.-+.- -++ ..+++-.++.++.+. |++|+++-....+-.|+.
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~ 56 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVG 56 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCC
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCC
Confidence 689999977765 566 455665667777777 999999887644334443
No 106
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=66.57 E-value=9.3 Score=29.73 Aligned_cols=46 Identities=17% Similarity=0.231 Sum_probs=35.7
Q ss_pred CCCceEEEEeC-CCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCC
Q 046633 6 SSKLNVAIIHP-DLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKR 51 (176)
Q Consensus 6 ~~~~kI~~~hp-dLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~ 51 (176)
.+..+|+++.| ++...--.+++-.+..++.+.|+++.++....+..
T Consensus 9 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~ 55 (289)
T 3g85_A 9 QSKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVICPYKTD 55 (289)
T ss_dssp --CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CCCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEecCCCch
Confidence 34578999999 77666677888888889999999999887765543
No 107
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=65.99 E-value=4.3 Score=34.23 Aligned_cols=37 Identities=11% Similarity=0.163 Sum_probs=27.6
Q ss_pred CCceEEEEeCCCCCCchHHHHH-----HHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIV-----DAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvv-----dlA~~l~~~Gh~V~l~T~ 46 (176)
+++||+++ .|+-.+||-|. .++++|.+.||+|+.+-.
T Consensus 2 ~kkkv~vl---~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 2 QNKKIAVI---FGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp CCEEEEEE---EECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCEEEEE---ECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 35689988 45556898664 357889999999988743
No 108
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=65.89 E-value=13 Score=29.48 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=35.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+...|+++.|++...=-.+++-.+..++.++|+++.++.+..+.
T Consensus 14 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 57 (303)
T 3kke_A 14 RSGTIGLIVPDVNNAVFADMFSGVQMAASGHSTDVLLGQIDAPP 57 (303)
T ss_dssp ---CEEEEESCTTSTTHHHHHHHHHHHHHHTTCCEEEEECCSTT
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEEeCCCCh
Confidence 44679999999877777788888889999999999998877554
No 109
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=65.80 E-value=9.3 Score=26.42 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=23.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|||+++ |.| ++-..+|..|.+.|++|+++...
T Consensus 4 ~m~i~Ii----G~G---~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA----GIG---RVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE----CCS---HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE----CCC---HHHHHHHHHHHhCCCeEEEEECC
Confidence 5788877 333 34456788999999999988653
No 110
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=65.60 E-value=6.3 Score=33.71 Aligned_cols=38 Identities=16% Similarity=0.267 Sum_probs=28.9
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++||||+|+= .....+...++|.+.||+|..+.+++|.
T Consensus 2 ~~mmrIvf~G-------tp~fa~~~L~~L~~~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 2 NAMIKVVFMG-------TPDFSVPVLRRLIEDGYDVIGVVTQPDR 39 (317)
T ss_dssp CTTSEEEEEC-------CSTTHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCceEEEEEe-------CCHHHHHHHHHHHHCCCcEEEEEeCCCc
Confidence 4689999973 3345567778888899999888877665
No 111
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=65.24 E-value=10 Score=30.51 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=30.6
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~ 48 (176)
|||++-..+ ..||-. +.++.+.|++. |++|.++.+..
T Consensus 1 ~~IllgvTG--siaa~k-~~~ll~~L~~~~g~~V~vv~T~~ 38 (197)
T 1sbz_A 1 MKLIVGMTG--ATGAPL-GVALLQALREMPNVETHLVMSKW 38 (197)
T ss_dssp CEEEEEECS--SSCHHH-HHHHHHHHHTCTTCEEEEEECHH
T ss_pred CEEEEEEeC--hHHHHH-HHHHHHHHHhccCCEEEEEECch
Confidence 578888766 678866 78999999999 99999987764
No 112
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=65.17 E-value=11 Score=29.32 Aligned_cols=46 Identities=17% Similarity=0.055 Sum_probs=33.2
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+.+..+|+++.|++...=-..++-.+..++.+.|+++.++....+.
T Consensus 5 ~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 50 (293)
T 3l6u_A 5 SPKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATSQNSR 50 (293)
T ss_dssp ----CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECSSCH
T ss_pred CCCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECCCCCH
Confidence 4456789999999765555667777778888899999998776443
No 113
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.96 E-value=9.9 Score=28.69 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=28.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+|||++. ||+=.+=-.++.+|.++||+|++++-..++
T Consensus 4 m~~ilIt------GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 4 VKKIVLI------GASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CCEEEEE------TCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CCEEEEE------cCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 5677664 666777788999999999999988765443
No 114
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=64.88 E-value=4.5 Score=31.81 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=24.1
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|+++| |.||.-.-.-.+|..|+++|+.|..+-.
T Consensus 54 VlllH---G~~~s~~~~~~la~~La~~Gy~Via~Dl 86 (281)
T 4fbl_A 54 VLVSH---GFTGSPQSMRFLAEGFARAGYTVATPRL 86 (281)
T ss_dssp EEEEC---CTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred EEEEC---CCCCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 77887 4444333456789999999999987654
No 115
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=64.33 E-value=11 Score=27.56 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=25.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|- .||-......++..|+++|+.|..+-.
T Consensus 34 ~vv~~HG---~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQE---IFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEECC---TTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEcC---cCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3556663 455556678999999999999988765
No 116
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=64.25 E-value=12 Score=32.25 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=28.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCc
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRR 52 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~h 52 (176)
++||++ +||.| ....++.++++.|++|.++.+..|+..
T Consensus 6 ~~kiLI------~g~g~-~a~~i~~aa~~~G~~~v~v~~~~~~~~ 43 (446)
T 3ouz_A 6 IKSILI------ANRGE-IALRALRTIKEMGKKAICVYSEADKDA 43 (446)
T ss_dssp CCEEEE------CCCHH-HHHHHHHHHHHTTCEEEEEEEGGGTTC
T ss_pred cceEEE------ECCCH-HHHHHHHHHHHcCCEEEEEEcCccccc
Confidence 456766 24445 777999999999999999987766443
No 117
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=64.10 E-value=8.2 Score=30.28 Aligned_cols=37 Identities=22% Similarity=0.182 Sum_probs=28.6
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.|+| - .-|+=|---+++++|.+|+++|++|.++=...
T Consensus 3 vI~v-s-~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAI-Y-GKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEE-E-ECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEE-e-cCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 3455 4 34555788899999999999999999986543
No 118
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=64.06 E-value=11 Score=31.11 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=32.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|+..+...-|.=|---+.+++|..|++.|..|.++-..
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 34566666555556688899999999999999999998654
No 119
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=63.98 E-value=9.6 Score=29.45 Aligned_cols=46 Identities=13% Similarity=0.144 Sum_probs=34.0
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+.+..+|+++.|++..-=-.+++-.+..++.++|+++.++....+.
T Consensus 5 ~~~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~ 50 (277)
T 3e61_A 5 KRKSKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQVLIGNSDNDI 50 (277)
T ss_dssp -----CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCEEEEECTTCH
T ss_pred cCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCH
Confidence 3445689999999876667778888888899999999988776543
No 120
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=63.67 E-value=9.3 Score=30.61 Aligned_cols=39 Identities=15% Similarity=0.153 Sum_probs=29.6
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
||+..+- .-|+=|---+++++|.+|+++|++|.++=...
T Consensus 2 MkvIavs-~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 2 MRQCAIY-GKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp CEEEEEE-ECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred ceEEEEe-CCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4444444 35566888899999999999999999886543
No 121
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=63.47 E-value=18 Score=27.19 Aligned_cols=41 Identities=22% Similarity=0.336 Sum_probs=31.9
Q ss_pred CCceEEEEeCCCCCC-chHHHHHHHHHHHHHCCCeE-EEEEee
Q 046633 7 SKLNVAIIHPDLGIG-GAERLIVDAAVELVSHGHNV-HVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiG-GAERlvvdlA~~l~~~Gh~V-~l~T~~ 47 (176)
..||++|+..+--.| =+=+-..++|+++.++||+| .++-..
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 458999998875443 34456789999999999999 877655
No 122
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=63.34 E-value=10 Score=28.84 Aligned_cols=40 Identities=3% Similarity=0.036 Sum_probs=30.6
Q ss_pred CceEEEEeCCCCC---CchHHHHHHHHHHHHHCC--CeEEEEEee
Q 046633 8 KLNVAIIHPDLGI---GGAERLIVDAAVELVSHG--HNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgi---GGAERlvvdlA~~l~~~G--h~V~l~T~~ 47 (176)
||||+++.-+..- |-.++++-.++.++.+.| ++|.++-..
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 4689888777663 557777777888999987 999988765
No 123
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=63.27 E-value=13 Score=27.23 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=26.2
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||++. ||+-.+=-.++.+|.++||+|.+++-..
T Consensus 4 ~~ilVt------GatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIF------GATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEE------STTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEE------cCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 577664 5556677788999999999999887543
No 124
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=63.11 E-value=41 Score=27.08 Aligned_cols=37 Identities=14% Similarity=0.122 Sum_probs=28.7
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~ 47 (176)
|||+++.++ .=|=.-+..-+..+|+++ +.++++++..
T Consensus 1 ~~ILii~~~--~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~ 39 (326)
T 2gt1_A 1 MRVLIVKTS--SMGDVLHTLPALTDAQQAIPGIKFDWVVEE 39 (326)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHHHSTTCEEEEEEEG
T ss_pred CeEEEEecc--ccchHHhHHHHHHHHHHhCCCCEEEEEEeh
Confidence 689999887 334455667788888887 8999999975
No 125
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=62.95 E-value=15 Score=28.95 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=34.5
Q ss_pred CCCceEEEEeCCCCCCchH-HHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 6 SSKLNVAIIHPDLGIGGAE-RLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAE-RlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+..+|+++.|++...--. +++-.+..++.+.|+++.++.+..+
T Consensus 11 ~~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 55 (301)
T 3miz_A 11 SRSNTFGIITDYVSTTPYSVDIVRGIQDWANANGKTILIANTGGS 55 (301)
T ss_dssp -CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3456899999998765555 7888888899999999998876543
No 126
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=62.82 E-value=12 Score=29.90 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=26.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||++. ||+=.+=-.++.+|.++||+|..++-.
T Consensus 12 ~~M~ilVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL------GATGLLGHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE------STTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE------CCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 34677664 555667778889999999999988754
No 127
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=62.10 E-value=31 Score=27.73 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=28.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~ 47 (176)
|||+++.++ ++ |=.-+..-+..+|+++ +.++++++..
T Consensus 1 mkILii~~~-~~-GD~i~~~p~l~~Lk~~~P~~~i~~l~~~ 39 (348)
T 1psw_A 1 MKILVIGPS-WV-GDMMMSQSLYRTLQARYPQAIIDVMAPA 39 (348)
T ss_dssp CEEEEECCS-SH-HHHHHHHHHHHHHHHHSTTCEEEEEECG
T ss_pred CeEEEEecc-cc-CHHHHHHHHHHHHHHHCCCCEEEEEECc
Confidence 689998776 22 3334677788899887 9999999975
No 128
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=61.87 E-value=17 Score=28.70 Aligned_cols=42 Identities=17% Similarity=0.111 Sum_probs=34.8
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+|+++.|++..---..++-.+..++.+.|+++.+..+..+
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 43 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSANGN 43 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEECTTC
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCC
Confidence 458999999987777778888888899999999998877544
No 129
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=61.83 E-value=8.5 Score=32.61 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=33.1
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||..+.-.-|+=|---+++++|.+|+++|+.|.++-...
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~ 40 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDP 40 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 5666666666777888999999999999999999997643
No 130
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=61.81 E-value=12 Score=28.36 Aligned_cols=34 Identities=29% Similarity=0.226 Sum_probs=25.3
Q ss_pred eEEEEeCCCCCCch--HHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGA--ERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGA--ERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|- .||. ......++..|+++|+.|..+-.
T Consensus 29 ~vvl~HG---~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 29 LCIIIHG---FTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEECC---TTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred EEEEEcC---CCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 4667774 4444 56677899999999999987754
No 131
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=61.69 E-value=8.4 Score=30.45 Aligned_cols=39 Identities=21% Similarity=0.081 Sum_probs=32.1
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+||++...+ ..||- .+.++.+.|+++|++|.++.+....
T Consensus 3 k~IllgvTG--s~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATA--SINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECS--CGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEEC--HHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 478888876 67777 5679999999999999999887543
No 132
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=61.58 E-value=49 Score=24.89 Aligned_cols=37 Identities=24% Similarity=0.154 Sum_probs=27.7
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+||+++..+ |=.|-=+......|.+.|++|.+++...
T Consensus 6 kkv~ill~~---g~~~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 6 KSALVILAP---GAEEMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp CEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEEECC---CchHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 579988876 3334445566788999999999998764
No 133
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=61.24 E-value=20 Score=25.04 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=36.9
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
|+ ...+++||+++-++ +...-.+...|.+.|++|..+++. ..+.....+...++.+.+-.+|.
T Consensus 1 Ms-~~~~~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~~~---~~a~~~l~~~~~dlvi~d~~l~~ 63 (154)
T 2rjn_A 1 MS-LNYKNYTVMLVDDE------QPILNSLKRLIKRLGCNIITFTSP---LDALEALKGTSVQLVISDMRMPE 63 (154)
T ss_dssp ----CCSCCEEEEECSC------HHHHHHHHHHHHTTTCEEEEESCH---HHHHHHHTTSCCSEEEEESSCSS
T ss_pred CC-CCCCCCeEEEEcCC------HHHHHHHHHHHHHcCCeEEEeCCH---HHHHHHHhcCCCCEEEEecCCCC
Confidence 55 33467899999888 445556777788899988744432 22333333333566666544554
No 134
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=61.06 E-value=10 Score=28.07 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=22.8
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++| +++ |++ ..--.++..|+++|++|..+-.
T Consensus 14 ~vvllH-G~~-~~~-~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 14 HFVLVH-AAF-HGA-WCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp EEEEEC-CTT-CCG-GGGHHHHHHHHHTTCEEEEECC
T ss_pred eEEEEC-CCC-CCc-chHHHHHHHHHhcCCeEEEecc
Confidence 455555 433 333 3344888999999999988864
No 135
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=60.98 E-value=18 Score=28.97 Aligned_cols=40 Identities=23% Similarity=0.076 Sum_probs=29.0
Q ss_pred ceEEEEeCCCCCCc-hHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGG-AERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGG-AERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||++|.-+...++ ...++-.++.++.+.||+|.++-...
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL~~ 42 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYA 42 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEETTT
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEhhh
Confidence 68887765554555 55666667777888899999988763
No 136
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=60.98 E-value=20 Score=27.63 Aligned_cols=43 Identities=7% Similarity=0.073 Sum_probs=35.8
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+.+|+++.|++..---.+++-.+-.++.++|+++.++....+.
T Consensus 15 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 57 (298)
T 3tb6_A 15 NKTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNP 57 (298)
T ss_dssp CCEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCCh
Confidence 3789999999877777788888888999999999998776443
No 137
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=60.98 E-value=12 Score=28.58 Aligned_cols=36 Identities=17% Similarity=0.297 Sum_probs=26.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.|||++. ||+=.+=-.++.+|.++||+|.+++-..
T Consensus 20 ~~~~ilVt------GatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVV------GANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEE------CCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 45777664 5555666678899999999999887553
No 138
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=60.88 E-value=15 Score=30.98 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=34.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||++++-+. -|..|+++-.++..+.+.|++|.++...
T Consensus 255 ~~~kv~iiy~S~-~GnT~~la~~i~~~l~~~g~~v~~~~l~ 294 (414)
T 2q9u_A 255 CQKKVTVVLDSM-YGTTHRMALALLDGARSTGCETVLLEMT 294 (414)
T ss_dssp CCSEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred cCCeEEEEEECC-CchHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 468999998885 5999999999999999999999988764
No 139
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=60.27 E-value=21 Score=26.56 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=25.3
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|+++|. .|....+...-.++..|+++|+.|..+-..
T Consensus 49 vv~~HG-~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 49 AIIFHG-FTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEECC-TTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEcC-CCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 555554 333333677789999999999999887653
No 140
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=60.22 E-value=15 Score=28.66 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=33.9
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCe-EEEEEeecC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHN-VHVFTAHHD 49 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~-V~l~T~~~d 49 (176)
+.+..+|+++.|++...--.+++-.+..++.+.|++ +.+..+..+
T Consensus 7 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 52 (277)
T 3hs3_A 7 QKKSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGYTALISFSTNSD 52 (277)
T ss_dssp -CCCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred cCCCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCCCEEEEEeCCCC
Confidence 344568999999987666677777788888999999 777665543
No 141
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=59.86 E-value=11 Score=30.58 Aligned_cols=39 Identities=10% Similarity=0.049 Sum_probs=31.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+++||++...+ ..||-+ +.++...|++.| +|.++.+...
T Consensus 18 ~~k~IllgvTG--siaa~k-~~~ll~~L~~~g-~V~vv~T~~A 56 (209)
T 1mvl_A 18 RKPRVLLAASG--SVAAIK-FGNLCHCFTEWA-EVRAVVTKSS 56 (209)
T ss_dssp -CCEEEEEECS--SGGGGG-HHHHHHHHHTTS-EEEEEECTGG
T ss_pred CCCEEEEEEeC--cHHHHH-HHHHHHHHhcCC-CEEEEEcchH
Confidence 45789998887 556766 789999999999 9999988754
No 142
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=59.76 E-value=12 Score=29.58 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=26.2
Q ss_pred CceEEEEeCCCCCCch--HHHH-----HHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGA--ERLI-----VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGA--ERlv-----vdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+++. ||. ||-+ ..++++++++||+|..+...
T Consensus 2 ~~~i~il~-----gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLL-----GGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEEC-----CCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEe-----CCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 36898884 343 5544 57899999999999988765
No 143
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=59.62 E-value=16 Score=28.78 Aligned_cols=33 Identities=27% Similarity=0.382 Sum_probs=24.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||++. |.| .+=-.++.+|.++||+|+.++-.
T Consensus 3 ~~~ilVt----GaG---~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA----GCG---DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE----CCS---HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE----CCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677765 334 45567888999999999988755
No 144
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=59.50 E-value=16 Score=28.10 Aligned_cols=41 Identities=10% Similarity=-0.053 Sum_probs=30.6
Q ss_pred CceEEEEeCCCCC--CchHHHHHHHHHHHHHC--CCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGI--GGAERLIVDAAVELVSH--GHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgi--GGAERlvvdlA~~l~~~--Gh~V~l~T~~~ 48 (176)
||||+++.-+... |=.++++-.+++++.+. |++|.++-...
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~~ 45 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGR 45 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESSS
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5788888666544 34677777788888887 99999887653
No 145
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=59.49 E-value=14 Score=30.56 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=27.5
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEee
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAH 47 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~ 47 (176)
+.++|+|++. ||+=.+=-.++.+|.++| |+|..++..
T Consensus 29 ~~~~~~ilVt------GatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVV------GGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEE------TTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhCCCEEEEE------CCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 3456777663 555667778889999999 999988654
No 146
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=59.25 E-value=13 Score=29.16 Aligned_cols=38 Identities=11% Similarity=-0.053 Sum_probs=31.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
.++|+++.|++...=-..++-.+..+..+.|+++.++.
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 45899999998877777788888888889999999853
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=59.12 E-value=15 Score=26.71 Aligned_cols=34 Identities=32% Similarity=0.313 Sum_probs=24.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
..++|+++ |.| ++-..+|..|++.|++|+++...
T Consensus 18 ~~~~v~Ii----G~G---~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIF----GCG---RLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEE----CCS---HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEE----CCC---HHHHHHHHHHHhCCCeEEEEECC
Confidence 45688876 343 45556788889999999988754
No 148
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=59.10 E-value=14 Score=27.45 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=25.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||++. ||+-.+=-.++++|. +|++|.++...
T Consensus 2 ~kM~vlVt------Gasg~iG~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLI------GASGTLGSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEE------TTTSHHHHHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEE------cCCcHHHHHHHHHHH-CCCeEEEEecC
Confidence 45676553 666677778899999 99999887643
No 149
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=58.86 E-value=17 Score=30.58 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=32.6
Q ss_pred CCCceEEEEeCCCCCCch-HHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGA-ERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGA-ERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+|||+++.-++.-+|- ++++-.++..+.+.|++|.++-..
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 357899999999877665 555555777888899999988765
No 150
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=58.58 E-value=8.2 Score=31.98 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=27.9
Q ss_pred CceEEEEeCCCCCCchHHHH-----HHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLI-----VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlv-----vdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+++- |.-.+||-+ ..++++|.+.||+|..+-..
T Consensus 3 ~~~v~vl~---gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 3 RIKVAILF---GGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CEEEEEEE---ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CcEEEEEe---CCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 57899886 334568865 45688999999999987654
No 151
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=58.58 E-value=16 Score=28.53 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=31.5
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
.+..+|+++.|++...=-..++--+..++++.|+++.+.....++
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 50 (290)
T 2rgy_A 6 QQLGIIGLFVPTFFGSYYGTILKQTDLELRAVHRHVVVATGCGES 50 (290)
T ss_dssp --CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred CCCCeEEEEeCCCCCchHHHHHHHHHHHHHHCCCEEEEEeCCCch
Confidence 345689999999754434556666677788899999887665443
No 152
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=58.39 E-value=8.3 Score=30.22 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=31.1
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEE-EEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVH-VFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~-l~T~~ 47 (176)
+++|||+++.-++.-+|.-+.+++.+....+.|++|. ++-..
T Consensus 4 M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~~~idL~ 46 (199)
T 4hs4_A 4 TSPLHFVTLLGSLRKASFNAAVARALPEIAPEGIAITPLGSIG 46 (199)
T ss_dssp -CCEEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEEECCCGG
T ss_pred CCCCEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEEEEEehh
Confidence 4468999999998888876666676666666799998 66543
No 153
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=58.36 E-value=14 Score=27.84 Aligned_cols=35 Identities=11% Similarity=0.022 Sum_probs=23.7
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|+++|. . ||.-...-.++..|+++|+.|..+...
T Consensus 48 ~vv~~hG-~--~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 48 TILLMHG-K--NFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp EEEEECC-T--TCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred eEEEEcC-C--CCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 4555554 3 233334568899999999999887654
No 154
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=58.33 E-value=49 Score=25.05 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=27.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++||+++..+ |=.+-=+......|.+.|++|.+++...
T Consensus 3 ~~~v~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 3 SKRALVILAK---GAEEMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp CCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCEEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 4689998877 3333334556778889999999998653
No 155
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=58.22 E-value=15 Score=27.22 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=20.9
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|.+++-.
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 7 GATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 444556667888999999999988754
No 156
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=58.12 E-value=17 Score=24.61 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=23.0
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHH-CCCe-EEEEE
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVS-HGHN-VHVFT 45 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~-~Gh~-V~l~T 45 (176)
|+...++++||+++.+| +...-.+...|.+ .|++ |..++
T Consensus 1 M~~~~~~~~~iLivdd~------~~~~~~l~~~L~~~~~~~~v~~~~ 41 (143)
T 3cnb_A 1 MSLNVKNDFSILIIEDD------KEFADMLTQFLENLFPYAKIKIAY 41 (143)
T ss_dssp --------CEEEEECSC------HHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CcccccCCceEEEEECC------HHHHHHHHHHHHhccCccEEEEEC
Confidence 66666678899999888 4555567777888 8998 55443
No 157
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=57.74 E-value=23 Score=28.05 Aligned_cols=44 Identities=18% Similarity=0.036 Sum_probs=35.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++.+|+++.|++...=-..++--+..+.++.|+++.+..+..+.
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 45 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDI 45 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCH
Confidence 35689999999877666677777888888999999988865443
No 158
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=57.55 E-value=11 Score=30.62 Aligned_cols=42 Identities=7% Similarity=0.033 Sum_probs=30.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+++||++-..+ .++|=+-.+++.+.|++.|++|.++.+....
T Consensus 4 ~~k~IllgiTG--siaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTG--SHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECS--CGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEC--hHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 35689999887 3444432679999999999999999887543
No 159
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=57.46 E-value=13 Score=31.91 Aligned_cols=42 Identities=21% Similarity=0.179 Sum_probs=23.6
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEE-EEEeec
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVH-VFTAHH 48 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~-l~T~~~ 48 (176)
++++||||+++--. -=|.= ....+..+|+++ |+++. ++|..|
T Consensus 23 ~~m~~~kI~~v~Gt--r~~~~-~~a~li~~l~~~~~~~~~~~~~tG~h 67 (403)
T 3ot5_A 23 NAMAKIKVMSIFGT--RPEAI-KMAPLVLALEKEPETFESTVVITAQH 67 (403)
T ss_dssp ---CCEEEEEEECS--HHHHH-HHHHHHHHHHTCTTTEEEEEEECC--
T ss_pred hccccceEEEEEec--ChhHH-HHHHHHHHHHhCCCCCcEEEEEecCc
Confidence 34556799987533 11222 346788899987 68875 556544
No 160
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=57.32 E-value=17 Score=29.08 Aligned_cols=37 Identities=22% Similarity=0.104 Sum_probs=26.2
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++.+|||++. ||+=.+=-.++.+|.++||+|+.++-.
T Consensus 11 ~~~~~~vlVT------GatG~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVT------GITGQDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ----CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCeEEEE------CCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 4456787663 666677778899999999999988754
No 161
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=57.22 E-value=18 Score=28.38 Aligned_cols=45 Identities=13% Similarity=0.050 Sum_probs=32.1
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+..+|+++.|++...--..++--+..++++.|+++.+.....+
T Consensus 13 ~~~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 57 (289)
T 2fep_A 13 SKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQN 57 (289)
T ss_dssp ---CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred cCCCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 344568999999976555556777777788899999988765433
No 162
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=56.93 E-value=11 Score=29.45 Aligned_cols=40 Identities=23% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+|||+++--+ .-|.+|+++-.+|..+.+.|++|.++...
T Consensus 20 ~~~kv~IvY~S-~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 20 HNTPLLVLYGS-NMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp -CCCEEEEEEC-SSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCCeEEEEEEC-CChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 34677766544 36999999999999999999999987665
No 163
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=56.56 E-value=14 Score=29.79 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=24.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|..++..
T Consensus 18 ~~~~vlVt------GatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVT------GSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEE------TTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEE------CCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 44677653 555567778889999999999988654
No 164
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=56.45 E-value=14 Score=28.61 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.2
Q ss_pred ccCCCceEEEEeCC-----CCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 4 RRSSKLNVAIIHPD-----LGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 4 ~~~~~~kI~~~hpd-----LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++.+..+|+++.|+ +...-...++-.+..++.+.|+++.++....
T Consensus 4 ~~~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 53 (292)
T 3k4h_A 4 ANQTTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGET 53 (292)
T ss_dssp ---CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCCS
T ss_pred ccCCCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 34456789999999 8777777888888889999999998876553
No 165
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=56.23 E-value=16 Score=31.01 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=32.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++++|+|+-. -|+=|---+.+++|.+++++|++|.++....
T Consensus 14 ~~~~i~~~sg-kGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGG-KGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEEC-STTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCeEEEEEeC-CCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3467876654 5666778899999999999999999998753
No 166
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=55.91 E-value=13 Score=29.50 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=23.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+|||+|+ |.| ..=..+|..|++.||+|+++...
T Consensus 2 ~~m~i~ii----G~G---~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIA----GAG---AMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEE----CcC---HHHHHHHHHHHhCCCcEEEEECC
Confidence 36899987 333 23346788899999999998643
No 167
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=55.84 E-value=21 Score=27.85 Aligned_cols=45 Identities=4% Similarity=0.052 Sum_probs=31.3
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+..+|+++.|++...=-..++-.+..++.+.|+++.+.....+
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 49 (285)
T 3c3k_A 5 TAKTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGYRILLCNTESD 49 (285)
T ss_dssp --CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 345568999999975544455666666777889999988765433
No 168
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=55.84 E-value=15 Score=26.88 Aligned_cols=34 Identities=21% Similarity=0.048 Sum_probs=23.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|.- ||.....-.++..|+++|+.|..+-.
T Consensus 28 ~vv~~hG~---~~~~~~~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 28 VVLCIHGI---LEQGLAWQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp EEEEECCT---TCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred EEEEECCC---CcccchHHHHHHHhhhcCeEEEEECC
Confidence 46666643 33333455889999999999987754
No 169
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=55.63 E-value=9.8 Score=30.38 Aligned_cols=39 Identities=10% Similarity=-0.070 Sum_probs=32.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
++||++...+ ..||-+ ..++.+.|++.|++|.++.+...
T Consensus 8 ~k~IllgvTG--s~aa~k-~~~l~~~L~~~g~~V~vv~T~~A 46 (194)
T 1p3y_1 8 DKKLLIGICG--SISSVG-ISSYLLYFKSFFKEIRVVMTKTA 46 (194)
T ss_dssp GCEEEEEECS--CGGGGG-THHHHHHHTTTSSEEEEEECHHH
T ss_pred CCEEEEEEEC--HHHHHH-HHHHHHHHHHCCCEEEEEEchhH
Confidence 4689988887 777776 67999999999999999987643
No 170
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=55.53 E-value=8.3 Score=27.48 Aligned_cols=21 Identities=38% Similarity=0.657 Sum_probs=17.7
Q ss_pred HHHHHHHHHCCCeEEEEEeec
Q 046633 28 VDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 28 vdlA~~l~~~Gh~V~l~T~~~ 48 (176)
..+|..|+++|++|+|+-...
T Consensus 15 L~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp HHHHHHHHHTTCCEEEECSSS
T ss_pred HHHHHHHHHCCCCEEEEECCC
Confidence 478999999999999996543
No 171
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=55.21 E-value=18 Score=30.99 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=34.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHH--HCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELV--SHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~--~~Gh~V~l~T~~ 47 (176)
+.+||+++.. -|+=|---+.+++|.+++ ++|++|.++...
T Consensus 16 ~~~~i~~~~g-kGGvGKTt~a~~lA~~la~~~~g~~vllid~D 57 (348)
T 3io3_A 16 DSLKWIFVGG-KGGVGKTTTSSSVAVQLALAQPNEQFLLISTD 57 (348)
T ss_dssp TTCSEEEEEC-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECC
T ss_pred CCcEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 4578999887 566678889999999999 999999999875
No 172
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=55.10 E-value=6.5 Score=34.92 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=27.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.|||.++ ||=|+=..+|+.|.++||+|+++-..
T Consensus 2 ~~M~iiI~-------G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIIL-------GAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEE-------CCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEE-------CCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 56888875 55588899999999999999998543
No 173
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=55.10 E-value=18 Score=28.61 Aligned_cols=36 Identities=17% Similarity=0.041 Sum_probs=24.8
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.++|+|++. ||+=.+=-.++.+|.++||+|..+...
T Consensus 10 ~~~~~vlVT------GatG~iG~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRALIT------GVAGFVGKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEEEE------CCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 344555543 566667778899999999999987654
No 174
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=54.93 E-value=12 Score=27.10 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.-|+++|. ++ |.++ ..-.++..|+++|+.|..+-.
T Consensus 23 ~~vv~~HG-~~-~~~~-~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 23 TGVVLLHA-YT-GSPN-DMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp EEEEEECC-TT-CCGG-GGHHHHHHHHHTTCEEEECCC
T ss_pred ceEEEeCC-CC-CCHH-HHHHHHHHHHHCCCEEEecCC
Confidence 34656654 32 3333 446899999999999987654
No 175
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=54.71 E-value=21 Score=27.57 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=27.3
Q ss_pred CCCceEEEEeCCCCCCchHHH-HHHHHHHHHHCCCeEEEEEeec
Q 046633 6 SSKLNVAIIHPDLGIGGAERL-IVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERl-vvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++||||+++..| |.|-+ ++.-...|.+.|++|++++...
T Consensus 2 s~M~kV~ill~d----Gfe~~E~~~p~~vl~~ag~~v~~~s~~~ 41 (194)
T 4gdh_A 2 SHMVKVCLFVAD----GTDEIEFSAPWGIFKRAEIPIDSVYVGE 41 (194)
T ss_dssp ---CCEEEEEET----TCCHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CCCCEEEEEECC----CcCHHHHHHHHHHHHHCCCeEEEEEEcC
Confidence 468899999987 56543 4455677889999999887643
No 176
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=54.48 E-value=22 Score=27.70 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=30.0
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEE-EeecC
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVF-TAHHD 49 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~-T~~~d 49 (176)
.+..+|+++.|++...=-..++-.+..++++.|+++.+. ....+
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 50 (290)
T 3clk_A 6 KSSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGYNLIIVYSGSAD 50 (290)
T ss_dssp --CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTCEEEEEC-----
T ss_pred ccCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEeCCCCC
Confidence 345689999999766555667777777888899999887 55433
No 177
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=54.43 E-value=28 Score=27.95 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=35.0
Q ss_pred CCceEEEEeCC--CCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPD--LGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpd--LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+..+|+++.|+ +..-=-..++-.+..++.+.|+++.++.+..++
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 105 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHSA 105 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTSH
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeCCCCh
Confidence 45689999999 766666777878888899999999998866543
No 178
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=54.18 E-value=14 Score=31.86 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=26.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++||+++ |+.| ....++.+++++|++|..+.+..+.
T Consensus 6 ~k~ILI~------g~g~-~~~~i~~a~~~~G~~vv~v~~~~~~ 41 (461)
T 2dzd_A 6 IRKVLVA------NRGE-IAIRVFRACTELGIRTVAIYSKEDV 41 (461)
T ss_dssp CSEEEEC------SCHH-HHHHHHHHHHHHTCEEEEEECGGGT
T ss_pred CcEEEEE------CCcH-HHHHHHHHHHHcCCEEEEEECCccc
Confidence 4577775 3334 5678899999999999988776543
No 179
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=54.13 E-value=26 Score=26.09 Aligned_cols=40 Identities=8% Similarity=0.022 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCCCc-hHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGG-AERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGG-AERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|+|++|+...---|. +-+-..++|.++.+.||+|.++-..
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 346998887654554 6677889999999999999888765
No 180
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=54.11 E-value=7.3 Score=26.96 Aligned_cols=38 Identities=8% Similarity=0.150 Sum_probs=21.8
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEE
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVF 44 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~ 44 (176)
|+....+++||+++..| +...-.+...|.+.|++|..+
T Consensus 1 M~~~~~~~~~iLivd~~------~~~~~~l~~~L~~~g~~v~~~ 38 (147)
T 2zay_A 1 MSLAEGKWWRIMLVDTQ------LPALAASISALSQEGFDIIQC 38 (147)
T ss_dssp -------CEEEEEECTT------GGGGHHHHHHHHHHTEEEEEE
T ss_pred CCcccCCCceEEEEeCC------HHHHHHHHHHHHHcCCeEEEe
Confidence 66667778999999888 223335566677789887743
No 181
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=54.10 E-value=25 Score=26.82 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=33.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
..+|+++.|++...=-.+++-.+..+..+.|+++.++....+
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 43 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGYQLLIASSDDQ 43 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 357999999977666677777788888899999998876644
No 182
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=54.04 E-value=15 Score=31.44 Aligned_cols=37 Identities=14% Similarity=0.296 Sum_probs=27.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++|||+|+ |.....+...++|.+.||+|..+.+++|+
T Consensus 6 ~~mrivf~-------Gt~~fa~~~L~~L~~~~~~v~~Vvt~pd~ 42 (318)
T 3q0i_A 6 QSLRIVFA-------GTPDFAARHLAALLSSEHEIIAVYTQPER 42 (318)
T ss_dssp -CCEEEEE-------CCSHHHHHHHHHHHTSSSEEEEEECCCC-
T ss_pred cCCEEEEE-------ecCHHHHHHHHHHHHCCCcEEEEEcCCCC
Confidence 47899997 33356667778888999999888777664
No 183
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=53.92 E-value=27 Score=28.09 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=34.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+...|+++.|++..---..++-.+..++.++|+++.+..+..++
T Consensus 61 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 104 (339)
T 3h5o_A 61 KSRTVLVLIPSLANTVFLETLTGIETVLDAAGYQMLIGNSHYDA 104 (339)
T ss_dssp --CEEEEEESCSTTCTTHHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCh
Confidence 34679999999876666778888888899999999988766443
No 184
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=53.86 E-value=22 Score=29.52 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=34.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+|+++++-+ .-|..|+++-.+|..+.+.|++|.++...
T Consensus 255 ~~~k~~i~~~S-~~gnT~~la~~i~~~l~~~g~~v~~~~~~ 294 (404)
T 2ohh_A 255 VDERVTVIYDT-MHGSTRKMAHAIAEGAMSEGVDVRVYCLH 294 (404)
T ss_dssp CCSEEEEEECC-SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCCcEEEEEEC-CChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 45899999988 46899999999999999999999988754
No 185
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=53.80 E-value=17 Score=27.89 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=25.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++ |+-++-..+|..|.++||+|+++...
T Consensus 1 M~iiIi-------G~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIII-------GGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEE-------CCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEE-------CCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 456654 34578889999999999999999754
No 186
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=53.54 E-value=16 Score=27.37 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|.+++-.
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 7 GATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 555566677889999999999988754
No 187
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=53.51 E-value=20 Score=29.79 Aligned_cols=35 Identities=29% Similarity=0.321 Sum_probs=26.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+|||.|+ |+||+= +..+|.-|+++|++|+..=..
T Consensus 3 ~~~~i~~i----GiGg~G--ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHII----GIGGTF--MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEE----SCCSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEE----EECHHH--HHHHHHHHHhCCCEEEEEcCC
Confidence 46788775 788876 335788899999999987554
No 188
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=53.31 E-value=49 Score=27.33 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=34.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
.+.+|-|+.-++|.|=.+-++ ..+...+.+|..|.+++..-|.
T Consensus 17 ~~g~l~v~~G~MgsGKTT~lL-~~~~r~~~~g~kvli~kp~~D~ 59 (234)
T 2orv_A 17 TRGQIQVILGPMFSGKSTELM-RRVRRFQIAQYKCLVIKYAKDT 59 (234)
T ss_dssp -CCEEEEEECCTTSCHHHHHH-HHHHHHHTTTCCEEEEEETTCC
T ss_pred CceEEEEEECCCCCcHHHHHH-HHHHHHHHCCCeEEEEeecCCc
Confidence 456788888888999888776 6677778999999999987664
No 189
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=52.99 E-value=30 Score=25.97 Aligned_cols=41 Identities=15% Similarity=0.227 Sum_probs=29.2
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
..+++||+++..+ |=.+-=+......|.+.|++|.+++...
T Consensus 6 ~~~~~~v~il~~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 6 DLTGKKIAILAAD---GVEEIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CCTTCEEEEECCT---TCBHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEEeCC---CCCHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 3456899999776 3333345566788889999999998653
No 190
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=52.85 E-value=25 Score=27.46 Aligned_cols=43 Identities=9% Similarity=-0.024 Sum_probs=31.9
Q ss_pred CceEEEEeCC-C---CCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPD-L---GIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpd-L---giGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
..+|+++.|+ + ...--..++--+..++++.|+++.+..+..++
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 50 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNYFVLPFPFSEDR 50 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTCEEEECCCCSST
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCCEEEEEeCCCch
Confidence 3589999999 7 44445667777777888999999887655443
No 191
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=52.79 E-value=16 Score=29.71 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=23.5
Q ss_pred cccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCC--eEEEEEe
Q 046633 3 QRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGH--NVHVFTA 46 (176)
Q Consensus 3 ~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh--~V~l~T~ 46 (176)
++++++|||+++ |.| .+-..+|..|++.|| +|+++..
T Consensus 2 ~~~~~~mkI~Ii----GaG---~vG~~~a~~l~~~g~~~~V~l~d~ 40 (319)
T 1lld_A 2 ETTVKPTKLAVI----GAG---AVGSTLAFAAAQRGIAREIVLEDI 40 (319)
T ss_dssp -----CCEEEEE----CCS---HHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CcCCCCCEEEEE----CCC---HHHHHHHHHHHhCCCCCEEEEEeC
Confidence 455667899987 333 233447888899999 9998854
No 192
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=52.76 E-value=25 Score=29.66 Aligned_cols=42 Identities=17% Similarity=-0.001 Sum_probs=35.0
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHH------HCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELV------SHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~------~~Gh~V~l~T~~ 47 (176)
.+++||..+...-|+=|---+.+++|.+|+ ++|+.|.++-..
T Consensus 105 ~~~~~vIav~s~KGGvGKTT~a~nLA~~La~~~~~~~~g~rVlliD~D 152 (398)
T 3ez2_A 105 YSEAYVIFISNLKGGVSKTVSTVSLAHAMRAHPHLLMEDLRILVIDLD 152 (398)
T ss_dssp CCSCEEEEECCSSSSSSHHHHHHHHHHHHHHCTTTGGGCCCEEEEEEC
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC
Confidence 345788888888788889999999999999 479999988654
No 193
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=52.71 E-value=12 Score=29.23 Aligned_cols=34 Identities=21% Similarity=0.127 Sum_probs=25.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+|+ |+=..--.+|..|++.||+|+++...
T Consensus 22 ~mmkI~II-------G~G~mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 22 SMTTYAII-------GAGAIGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GSCCEEEE-------ECHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred cCCEEEEE-------CCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 35789887 24455567899999999999984433
No 194
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=52.50 E-value=30 Score=24.91 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=26.9
Q ss_pred eEEEEeCC--CCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPD--LGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpd--LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|+++|.. .|.+......-.++..|+++|+.|..+-..
T Consensus 33 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 72 (208)
T 3trd_A 33 TGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFR 72 (208)
T ss_dssp EEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecC
Confidence 46666653 334445666678999999999999877653
No 195
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=52.35 E-value=14 Score=28.47 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=21.4
Q ss_pred CchHHHHHHHHHHHHHCC-CeEEEEEeec
Q 046633 21 GGAERLIVDAAVELVSHG-HNVHVFTAHH 48 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~G-h~V~l~T~~~ 48 (176)
||+-.+=-.++.+|.++| ++|.+++-..
T Consensus 30 GatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 30 GAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp TTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred eCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 555556667889999999 8998877543
No 196
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=51.95 E-value=29 Score=26.69 Aligned_cols=27 Identities=22% Similarity=0.357 Sum_probs=21.5
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=..+|.+|+++|++|.++...
T Consensus 20 GasggiG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 20 GGAQNIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 566667778899999999999887643
No 197
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=51.94 E-value=22 Score=27.37 Aligned_cols=43 Identities=14% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCceEEEEeCC--CCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPD--LGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpd--LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+..+|+++.|+ +..---..++-.+..++.++|+++.++....+
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 62 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS 62 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 45689999999 65555556666777778889999988765433
No 198
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=51.85 E-value=18 Score=27.91 Aligned_cols=43 Identities=7% Similarity=0.068 Sum_probs=30.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+..+|+++.|++..--...++--+..+++++|+++.+.....+
T Consensus 6 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 48 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNN 48 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 4568999999976544555666667777889999988755433
No 199
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=51.76 E-value=28 Score=27.16 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=30.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+..+|+++.|++...=-..++--+..++.+.|+++.+.....
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 60 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSED 60 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 456899999997654445566666677788999998876543
No 200
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=51.74 E-value=26 Score=29.75 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=25.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||+++ |.| .....++.+++++|++|..+....
T Consensus 18 ~~~~ili~----g~g---~~g~~~~~a~~~~G~~v~~v~~~~ 52 (433)
T 2dwc_A 18 SAQKILLL----GSG---ELGKEIAIEAQRLGVEVVAVDRYA 52 (433)
T ss_dssp TCCEEEEE----SCS---HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEE----CCC---HHHHHHHHHHHHCCCEEEEEECCC
Confidence 35688887 333 245567888899999998887653
No 201
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=51.33 E-value=37 Score=26.89 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=29.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
..||++++.-.-..==-=-+++-+++.|+++||+|++..+.
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 34677777533333334457889999999999999998765
No 202
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=51.24 E-value=14 Score=30.06 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=24.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||++. ||+=.+=-.++.+|.++||+|.+++-..
T Consensus 9 ~~~~IlVt------GatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 9 PKGRVLIA------GATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp --CCEEEE------CTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCeEEEE------CCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34677663 4444566678889999999999887653
No 203
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=51.23 E-value=59 Score=29.49 Aligned_cols=121 Identities=13% Similarity=0.204 Sum_probs=66.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCccccc----c-c---CC-ceeEEEeCCcccchhhh
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEE----T-V---NG-TFPVTVYGDFLPRHFFY 77 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~E----t-~---~G-~l~V~v~Gd~lPr~i~g 77 (176)
..+|+++. |++. .+..+|..|.+.|.+|..+.+.....+ |++ . . .| ...|..-.| .
T Consensus 363 ~GKrvaI~------gd~~-~~~~la~fL~elGm~vv~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~~~~D-----~-- 427 (523)
T 3u7q_B 363 HGKRFALW------GDPD-FVMGLVKFLLELGCEPVHILCHNGNKR-WKKAVDAILAASPYGKNATVYIGKD-----L-- 427 (523)
T ss_dssp TTCEEEEE------CSHH-HHHHHHHHHHHTTCEEEEEEETTCCHH-HHHHHHHHHHTSGGGTTCEEEESCC-----H--
T ss_pred CCCEEEEE------CCch-HHHHHHHHHHHcCCEEEEEEeCCCCHH-HHHHHHHHHhhccCCCCcEEEECCC-----H--
Confidence 34678875 3444 456899999999999877655422211 221 1 1 11 012322223 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCcEEEEcC----CCc---------cchheecccCceeeccccccccccchh----h
Q 046633 78 RLHALCAYLRCLFVALCVLLRSSSYDVIIADQ----VSV---------VIPVLKLRSSTKVFMLNIARYMQILEL----L 140 (176)
Q Consensus 78 r~~alcA~lR~l~~~~~~~~~~~~~DVvi~Dq----vs~---------~iP~l~l~~~~~vlf~~~~~YcHFPd~----L 140 (176)
+.... .++..+||++|..+ ++- .||+++.= -|+ | --|.++. =
T Consensus 428 ------------~~l~~-~i~~~~pDLlig~s~~k~~a~~~~~~~~~~giP~irig--fPi-~-----dr~~~~~~p~~G 486 (523)
T 3u7q_B 428 ------------WHLRS-LVFTDKPDFMIGNSYGKFIQRDTLHKGKEFEVPLIRIG--FPI-F-----DRHHLHRSTTLG 486 (523)
T ss_dssp ------------HHHHH-HHHHTCCSEEEECTTHHHHHHHHHHHCGGGCCCEEECS--SCC-C-----SSSSGGGCCCSH
T ss_pred ------------HHHHH-HHHhcCCCEEEECccHHHHHHHhhcccccCCCceEEec--CCe-e-----eeecCCCCceee
Confidence 11111 23567899999876 222 67888731 111 2 2233222 1
Q ss_pred cccchhHHHHHHHHHHHHHHHHH
Q 046633 141 LFEVLFFLARYYSTVIFRICYWL 163 (176)
Q Consensus 141 l~~~~~~lk~lYr~p~d~~Ee~t 163 (176)
..--..++..++..-+|-+++-+
T Consensus 487 Y~G~~~l~~~i~n~ll~~~~~~~ 509 (523)
T 3u7q_B 487 YEGAMQILTTLVNSILERLDEET 509 (523)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHHhhhc
Confidence 11234689999999999888776
No 204
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=51.19 E-value=25 Score=26.51 Aligned_cols=33 Identities=9% Similarity=-0.044 Sum_probs=25.6
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEE
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVF 44 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~ 44 (176)
|++.-+. |.=|---+.+++|.+|+++|++|-++
T Consensus 4 I~v~s~k-gGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTD-TEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESS-TTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECC-CCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4444443 45577789999999999999999885
No 205
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=51.11 E-value=31 Score=24.92 Aligned_cols=40 Identities=23% Similarity=0.224 Sum_probs=27.1
Q ss_pred CceEEEEeCC--CCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPD--LGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpd--LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.-|+++|.. .|..........++..|+++|+.|..+...
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 3346666653 223345566778999999999999877653
No 206
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=50.97 E-value=13 Score=31.56 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=27.9
Q ss_pred CceEEEEeCCCCCCchHHHH-----HHHHHHH-HHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLI-----VDAAVEL-VSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlv-----vdlA~~l-~~~Gh~V~l~T~~ 47 (176)
+|||+++- |.-.+||-+ ..++++| .+.||+|+.+-..
T Consensus 3 k~~v~vl~---gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIF---GGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEE---ECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEe---CCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 57899884 234578754 6677899 9999999988543
No 207
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=50.89 E-value=37 Score=27.23 Aligned_cols=41 Identities=17% Similarity=0.112 Sum_probs=32.2
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
-.+.++.=+.|.|=..-+ ..+|..++.+|..|.+++..-|.
T Consensus 12 G~i~litG~mGsGKTT~l-l~~~~r~~~~g~kVli~~~~~d~ 52 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAEL-IRRLHRLEYADVKYLVFKPKIDT 52 (223)
T ss_dssp CEEEEEECSTTSCHHHHH-HHHHHHHHHTTCCEEEEEECCCG
T ss_pred cEEEEEECCCCCcHHHHH-HHHHHHHHhcCCEEEEEEeccCc
Confidence 467788777788877555 58888889999999999877554
No 208
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=50.72 E-value=36 Score=25.95 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=29.2
Q ss_pred CCCceEEEEeCCCCCCchH-HHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 6 SSKLNVAIIHPDLGIGGAE-RLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAE-RlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
++++||+++..+ |.| -=+......|.+.|++|.+++...+
T Consensus 21 ~~~~kV~ill~~----g~~~~e~~~~~~~l~~ag~~v~~vs~~~~ 61 (193)
T 1oi4_A 21 GLSKKIAVLITD----EFEDSEFTSPADEFRKAGHEVITIEKQAG 61 (193)
T ss_dssp TCCCEEEEECCT----TBCTHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred ccCCEEEEEECC----CCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 345789999887 333 3345677788899999999987643
No 209
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=50.70 E-value=28 Score=28.83 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=25.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||+++ |.| .....++.+++++|++|..+....
T Consensus 10 ~~~~ili~----g~g---~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLL----GSG---ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEE----SCS---HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEE----CCC---HHHHHHHHHHHHcCCEEEEEECCC
Confidence 45788887 233 245677899999999998886653
No 210
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=50.60 E-value=31 Score=24.64 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=29.5
Q ss_pred ceEEEEeCCCCCCc-hHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGG-AERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGG-AERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|++|+...---|. +=|-..++|.++.+.||+|.++-..
T Consensus 2 kk~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 2 KRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 46887777654443 3377789999999999999888766
No 211
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=50.56 E-value=44 Score=25.47 Aligned_cols=40 Identities=18% Similarity=0.105 Sum_probs=28.1
Q ss_pred ceEEEEeCCCC-CCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLG-IGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLg-iGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
..++++.++.| .+|.......++..|+++|+.|..+....
T Consensus 50 ~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 90 (283)
T 3bjr_A 50 LPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTL 90 (283)
T ss_dssp EEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred CcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccC
Confidence 34444444434 45667777789999999999998887653
No 212
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=50.20 E-value=30 Score=29.34 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=26.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++|||+|+=.. ...+...++|.+.||+|..+.+.+|.
T Consensus 2 ~~mrIvf~Gt~-------~fa~~~L~~L~~~~~~i~~Vvt~pd~ 38 (314)
T 1fmt_A 2 ESLRIIFAGTP-------DFAARHLDALLSSGHNVVGVFTQPDR 38 (314)
T ss_dssp CCCEEEEEECS-------HHHHHHHHHHHHTTCEEEEEECCCCB
T ss_pred CCCEEEEEecC-------HHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 56999997543 35556667888889999877766553
No 213
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=50.14 E-value=36 Score=25.39 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=29.7
Q ss_pred ceEEEEeCCCCC-CchHHHHHHHHHHHHHC------CCeEEEEEee
Q 046633 9 LNVAIIHPDLGI-GGAERLIVDAAVELVSH------GHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgi-GGAERlvvdlA~~l~~~------Gh~V~l~T~~ 47 (176)
|||+++.-+... |-.++++-.++..+.+. |++|.++-..
T Consensus 1 Mkilii~gS~r~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~ 46 (191)
T 1t0i_A 1 MKVGIIMGSVRAKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQ 46 (191)
T ss_dssp CEEEEEECCCCSSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHH
T ss_pred CeEEEEeCCCCCCCchHHHHHHHHHHHHHhhccCCCCceEEEEehh
Confidence 688888877654 55777777778888877 7999988765
No 214
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=50.06 E-value=6.7 Score=30.59 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=31.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEE-EEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVH-VFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~-l~T~~ 47 (176)
++|||+++.-+..-++--+.+++.+.+..+.|++|. ++-..
T Consensus 3 ~~mkil~I~GS~r~~s~t~~l~~~~~~~~~~g~~v~~~idL~ 44 (193)
T 3svl_A 3 EKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA 44 (193)
T ss_dssp -CEEEEEEECCCSTTCHHHHHHHHGGGTSCTTEEEEECCCST
T ss_pred CCCEEEEEEccCCCCCHHHHHHHHHHHHccCCCEEEEEEeHH
Confidence 468999999888888887777777666666799998 65554
No 215
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=49.93 E-value=14 Score=29.40 Aligned_cols=32 Identities=38% Similarity=0.659 Sum_probs=21.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
++|||+|+ ++|.=|. .+|..|++.||+|.++.
T Consensus 2 ~~m~i~ii--G~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFI--GLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEEC--CCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEE--ccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 46899987 3333232 46788889999998776
No 216
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=49.91 E-value=21 Score=27.60 Aligned_cols=41 Identities=20% Similarity=0.109 Sum_probs=32.0
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
++|+++.|++..---..++-.+..+++++|+++.+..+..+
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~ 42 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGYNLVVLDSQNN 42 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCcEEEEeCCCCC
Confidence 57999999976655566777777888899999998765544
No 217
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=49.84 E-value=24 Score=28.49 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=25.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.|+|++. ||+=.+=-.++.+|.++||+|..+.-.
T Consensus 19 ~~~~vlVT------GasG~iG~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 19 SHMRILIT------GGAGCLGSNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TCCEEEEE------TTTSHHHHHHHHHHGGGTCEEEEEECC
T ss_pred CCCEEEEE------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 34676653 555566678889999999999987753
No 218
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=49.77 E-value=24 Score=26.59 Aligned_cols=36 Identities=11% Similarity=0.209 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHH-HCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELV-SHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~-~~Gh~V~l~T~~ 47 (176)
.|||.+++. ||+-.+=-.++++|. ++||+|.+++-.
T Consensus 3 ~mmk~vlVt-----Gasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 3 AMYXYITIL-----GAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSCSEEEEE-----STTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred ceEEEEEEE-----eCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 356743332 444455567788888 899999887654
No 219
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=49.64 E-value=24 Score=28.12 Aligned_cols=41 Identities=15% Similarity=0.005 Sum_probs=32.6
Q ss_pred ceEEEEeC-CCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHP-DLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hp-dLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.|+|.-. .-|+=|---+++++|.+|+++|+.|.++-....
T Consensus 35 ~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D~q 76 (298)
T 2oze_A 35 EAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQ 76 (298)
T ss_dssp SCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred cEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 45777775 336668899999999999999999999866543
No 220
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=49.51 E-value=29 Score=23.17 Aligned_cols=33 Identities=9% Similarity=0.149 Sum_probs=23.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 5 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 37 (132)
T 3lte_A 5 QSKRILVVDDD------QAMAAAIERVLKRDHWQVEIAH 37 (132)
T ss_dssp --CEEEEECSC------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCccEEEEECC------HHHHHHHHHHHHHCCcEEEEeC
Confidence 35789999888 5555567788888999887544
No 221
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=49.41 E-value=18 Score=28.93 Aligned_cols=26 Identities=19% Similarity=0.165 Sum_probs=19.7
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+=.+=-.++.+|.++||+|..++-
T Consensus 16 GatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 16 GGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 45556666788899999999987653
No 222
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=49.37 E-value=94 Score=25.10 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=25.5
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEeecC
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAHHD 49 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~~d 49 (176)
.+||||+|+-.+- | .....+.+++.+. +++|..+.+..+
T Consensus 20 ~~~~rI~~l~SG~--g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~ 60 (229)
T 3auf_A 20 GHMIRIGVLISGS--G---TNLQAILDGCREGRIPGRVAVVISDRA 60 (229)
T ss_dssp TTCEEEEEEESSC--C---HHHHHHHHHHHTTSSSEEEEEEEESST
T ss_pred CCCcEEEEEEeCC--c---HHHHHHHHHHHhCCCCCeEEEEEcCCC
Confidence 4568999986542 2 3455777777776 678866665533
No 223
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=49.37 E-value=16 Score=29.46 Aligned_cols=40 Identities=23% Similarity=0.176 Sum_probs=30.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHH-CCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVS-HGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~-~Gh~V~l~T~~~d 49 (176)
+++||++...+ ..||-+. .+++..|++ .|++|.++.+...
T Consensus 18 ~~k~IllgvTG--siaa~k~-~~lv~~L~~~~g~~V~vv~T~~A 58 (206)
T 1qzu_A 18 RKFHVLVGVTG--SVAALKL-PLLVSKLLDIPGLEVAVVTTERA 58 (206)
T ss_dssp SSEEEEEEECS--SGGGGTH-HHHHHHHC---CEEEEEEECTGG
T ss_pred CCCEEEEEEeC--hHHHHHH-HHHHHHHhcccCCEEEEEECHhH
Confidence 45789998887 6666665 799999999 8999999988754
No 224
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=48.99 E-value=17 Score=28.65 Aligned_cols=36 Identities=31% Similarity=0.317 Sum_probs=26.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|||++. ||+=.+=-.++++|.++||+|+.++-..
T Consensus 6 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 6 LKHRILIT------GGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCCeEEEE------CCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 35677653 5555667788999999999999887543
No 225
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=48.96 E-value=31 Score=28.63 Aligned_cols=39 Identities=15% Similarity=0.166 Sum_probs=34.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+||++++-+. -|.+|+++-.+|..+.+.|++|.++...
T Consensus 252 ~~kv~i~y~S~-~Gnt~~lA~~i~~~l~~~g~~v~~~~~~ 290 (402)
T 1e5d_A 252 TNKVVIFYDSM-WHSTEKMARVLAESFRDEGCTVKLMWCK 290 (402)
T ss_dssp CSEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCcEEEEEECC-ChhHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 57999999885 7899999999999999999999888765
No 226
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=48.92 E-value=37 Score=28.50 Aligned_cols=41 Identities=22% Similarity=0.191 Sum_probs=27.6
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|++.-.+.++|+++ |.|. +...+|.++++.|++|.++....
T Consensus 7 m~~~~~~~k~IlIl----G~G~---~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 7 MTRIILPGKTIGII----GGGQ---LGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CCCCCCTTSEEEEE----CCSH---HHHHHHHHHHHTTCEEEEEESST
T ss_pred ccccCCCCCEEEEE----CCCH---HHHHHHHHHHHcCCEEEEEeCCC
Confidence 33333345678775 3332 67788889999999999886543
No 227
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=48.37 E-value=35 Score=27.47 Aligned_cols=44 Identities=16% Similarity=-0.055 Sum_probs=34.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+..+|+++.|++..-=-..++-.+-.++.++|+++.+..+..++
T Consensus 67 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 110 (344)
T 3kjx_A 67 RVNLVAVIIPSLSNMVFPEVLTGINQVLEDTELQPVVGVTDYLP 110 (344)
T ss_dssp CCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSSEEEEEECTTCH
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCH
Confidence 34689999999876666777777888888999999887765443
No 228
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=48.35 E-value=40 Score=22.47 Aligned_cols=58 Identities=12% Similarity=0.005 Sum_probs=33.3
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCccc
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLP 72 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lP 72 (176)
.+++||+++-.+ +...-.+...|.+.|++|..++ +...+.+.......++....-.+|
T Consensus 5 ~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~---~~~~a~~~l~~~~~dlvi~d~~l~ 62 (130)
T 3eod_A 5 LVGKQILIVEDE------QVFRSLLDSWFSSLGATTVLAA---DGVDALELLGGFTPDLMICDIAMP 62 (130)
T ss_dssp TTTCEEEEECSC------HHHHHHHHHHHHHTTCEEEEES---CHHHHHHHHTTCCCSEEEECCC--
T ss_pred CCCCeEEEEeCC------HHHHHHHHHHHHhCCceEEEeC---CHHHHHHHHhcCCCCEEEEecCCC
Confidence 356799999888 4555567778888999987533 222223322222345555543344
No 229
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=48.20 E-value=13 Score=33.60 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=29.8
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHC-CC-eEEEEEeecC
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSH-GH-NVHVFTAHHD 49 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh-~V~l~T~~~d 49 (176)
++++.|||+++ ++|.=|. -+|..|++. || +|+++....+
T Consensus 14 ~~~~~mkIaVI--GlG~mG~-----~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 14 ERGPIKKIGVL--GMGYVGI-----PAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp HHCSCCEEEEE--CCSTTHH-----HHHHHHHHSTTCCEEEEECCCCT
T ss_pred hcCCCCEEEEE--CcCHHHH-----HHHHHHHHhCCCCeEEEEECChh
Confidence 34567899998 6666553 688889999 99 9999876544
No 230
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=48.19 E-value=20 Score=28.25 Aligned_cols=39 Identities=10% Similarity=0.136 Sum_probs=25.3
Q ss_pred ceEEEEeCCCCC-CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGI-GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgi-GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++.-.... =-...-...++.+++++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 689998754210 000123356888999999999988754
No 231
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=48.13 E-value=57 Score=23.52 Aligned_cols=57 Identities=9% Similarity=0.098 Sum_probs=33.9
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHH-HHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVD-AAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYG 68 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvd-lA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~G 68 (176)
.+++|||.++=- .|+.--++++ +-.+..++|.+|.+....... +++..+ ..+|..+|
T Consensus 3 ~~~~mkIlL~C~---aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~---~~~~~~-~~DvvLLg 60 (108)
T 3nbm_A 3 ASKELKVLVLCA---GSGTSAQLANAINEGANLTEVRVIANSGAYGA---HYDIMG-VYDLIILA 60 (108)
T ss_dssp --CCEEEEEEES---SSSHHHHHHHHHHHHHHHHTCSEEEEEEETTS---CTTTGG-GCSEEEEC
T ss_pred cccCceEEEECC---CCCCHHHHHHHHHHHHHHCCCceEEEEcchHH---HHhhcc-CCCEEEEC
Confidence 456789988854 3444444444 445555689999998744332 444443 36788776
No 232
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=47.75 E-value=31 Score=23.23 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=24.4
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
|+. ..+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 1 Ms~-~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 38 (136)
T 3hdv_A 1 MSL-VAARPLVLVVDDN------AVNREALILYLKSRGIDAVGAD 38 (136)
T ss_dssp -------CCEEEEECSC------HHHHHHHHHHHHHTTCCEEEES
T ss_pred CCC-CCCCCeEEEECCC------HHHHHHHHHHHHHcCceEEEeC
Confidence 553 2356799999888 4455567778888899987644
No 233
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=47.73 E-value=41 Score=24.39 Aligned_cols=33 Identities=18% Similarity=0.200 Sum_probs=24.5
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|+++|. .||.......++..|+++|+.|..+-.
T Consensus 31 vv~~hG---~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 31 IVIAQD---IFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEECC---TTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred EEEEcC---CCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 556663 444445677899999999999988874
No 234
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=47.73 E-value=31 Score=28.27 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=26.9
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+..++|||+|+ + .| ..=..+|..|++.||+|+++....
T Consensus 17 ~~~~m~~I~iI--G--~G---~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 17 RGSHMMEVGFL--G--LG---IMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp -CCCSCEEEEE--C--CS---HHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccccCCEEEEE--C--cc---HHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34567899998 3 33 334568899999999999885443
No 235
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=47.70 E-value=28 Score=26.56 Aligned_cols=31 Identities=32% Similarity=0.446 Sum_probs=23.7
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
|||+++ |.|.|+-+. .++.|.+.|.++.++.
T Consensus 3 ~~I~ii--d~~~~~~~~----~~~~l~~~G~~~~~~~ 33 (200)
T 1ka9_H 3 MKALLI--DYGSGNLRS----AAKALEAAGFSVAVAQ 33 (200)
T ss_dssp CEEEEE--CSSCSCHHH----HHHHHHHTTCEEEEES
T ss_pred cEEEEE--eCCCccHHH----HHHHHHHCCCeEEEec
Confidence 689988 556777654 3678888999999874
No 236
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=47.66 E-value=14 Score=26.12 Aligned_cols=28 Identities=18% Similarity=0.356 Sum_probs=25.5
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|.+|+++-.+|..+.+.|++|.++-..
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~ 36 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVS 36 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGG
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhh
Confidence 6999999999999999999999988664
No 237
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=47.56 E-value=22 Score=26.72 Aligned_cols=28 Identities=11% Similarity=0.013 Sum_probs=22.1
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
||+=.+=-.++++|.++||+|..++-..
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 7 GSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp STTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 5555666788999999999999887553
No 238
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=47.53 E-value=17 Score=27.14 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=23.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.-|+++|. + ||.....-.++..|+++|+.|..+-.
T Consensus 41 ~~vv~~HG-~--~~~~~~~~~~~~~l~~~G~~v~~~d~ 75 (270)
T 3rm3_A 41 VGVLLVHG-F--TGTPHSMRPLAEAYAKAGYTVCLPRL 75 (270)
T ss_dssp EEEEEECC-T--TCCGGGTHHHHHHHHHTTCEEEECCC
T ss_pred eEEEEECC-C--CCChhHHHHHHHHHHHCCCEEEEeCC
Confidence 34666664 3 33333356889999999999977654
No 239
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=47.41 E-value=26 Score=28.92 Aligned_cols=35 Identities=17% Similarity=0.280 Sum_probs=25.5
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.++|||+|+ ++|.=| ..+|..|++.||+|+++...
T Consensus 29 ~~~~~I~iI--G~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFL--GTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEE--CCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred cCCCEEEEE--CccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 356899998 544423 35788899999999988644
No 240
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=47.41 E-value=34 Score=28.34 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=34.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+||++++-+. -|.+|+++-.++..+.+.|.+|.++...
T Consensus 251 ~~~i~i~y~S~-~GnT~~lA~~ia~~l~~~g~~v~~~~~~ 289 (398)
T 1ycg_A 251 KAKAVIAYDTM-WLSTEKMAHALMDGLVAGGCEVKLFKLS 289 (398)
T ss_dssp CSEEEEEECCS-SSHHHHHHHHHHHHHHHTTCEEEEEEGG
T ss_pred cCeEEEEEECC-ccHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 47899998774 7999999999999999999999988764
No 241
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=47.12 E-value=32 Score=28.37 Aligned_cols=34 Identities=15% Similarity=0.054 Sum_probs=23.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|+||+++ |.|. +-..+|.+.++.|++|.++....
T Consensus 1 MK~I~il----Ggg~---~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLV----GGKL---QGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEE----CCSH---HHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEE----CCCH---HHHHHHHHHHHCCCEEEEEeCCC
Confidence 3567765 3332 33467778889999999996553
No 242
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=47.12 E-value=30 Score=26.69 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=26.9
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
++.+++|++++ |+||+-|++.+++.+ .|+++.-|.-
T Consensus 8 ~~~~~k~v~Ii----GAGg~g~~v~~~l~~---~~~~~vgfiD 43 (220)
T 4ea9_A 8 ASLAIGGVVII----GGGGHAKVVIESLRA---CGETVAAIVD 43 (220)
T ss_dssp CCCCSSCEEEE----CCSHHHHHHHHHHHH---TTCCEEEEEC
T ss_pred cccCCCCEEEE----cCCHHHHHHHHHHHh---CCCEEEEEEe
Confidence 33455677764 899999999888775 7898877663
No 243
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=46.96 E-value=14 Score=28.98 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=26.7
Q ss_pred CceEEEE--eCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAII--HPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~--hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||||+++ ||.. ++ .++.-.+++++++.|++|.++-..
T Consensus 1 MmkiLiI~gsp~~--~~-s~l~~~l~~~~~~~g~ev~~~dL~ 39 (192)
T 3f2v_A 1 MPKTLIILAHPNI--SQ-STVHKHWSDAVRQHTDRFTVHELY 39 (192)
T ss_dssp -CCEEEEECCTTG--GG-CSHHHHHHHHHTTCTTTEEEEEHH
T ss_pred CCEEEEEEeCCCc--cH-HHHHHHHHHHHHhCCCeEEEEEch
Confidence 4678776 6663 33 367777788888899999998765
No 244
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=46.85 E-value=28 Score=28.09 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=25.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|..++..
T Consensus 26 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 26 DRKRILIT------GGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEE------cCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45666653 555667778889999999999988743
No 245
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=46.65 E-value=43 Score=28.83 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=28.8
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++..+.-.-| -|--.+..++|...++.|..|.+++.....
T Consensus 75 ~li~I~G~pG-sGKTtlal~la~~~~~~g~~vlyi~~E~s~ 114 (366)
T 1xp8_A 75 RITEIYGPES-GGKTTLALAIVAQAQKAGGTCAFIDAEHAL 114 (366)
T ss_dssp SEEEEEESTT-SSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred cEEEEEcCCC-CChHHHHHHHHHHHHHCCCeEEEEECCCCh
Confidence 3444443333 366678889999999999999999987543
No 246
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=46.58 E-value=55 Score=25.18 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=28.7
Q ss_pred ceEEEEeCCCC-------CCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHPDLG-------IGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdLg-------iGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+||+++..+-+ -|=-+-=+......|.+.|++|.+++....
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~~ 53 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQGG 53 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSCB
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 58999998533 122223455677788899999999997643
No 247
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=46.58 E-value=1.3e+02 Score=26.82 Aligned_cols=36 Identities=14% Similarity=0.113 Sum_probs=27.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+++=| +.-|=--++..+|..++++|+.|.+++..
T Consensus 102 vIlivG~--~G~GKTTt~~kLA~~l~~~G~kVllv~~D 137 (443)
T 3dm5_A 102 ILLMVGI--QGSGKTTTVAKLARYFQKRGYKVGVVCSD 137 (443)
T ss_dssp EEEEECC--TTSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred EEEEECc--CCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3444444 45577788889999999999999998753
No 248
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=46.48 E-value=77 Score=26.79 Aligned_cols=38 Identities=18% Similarity=0.136 Sum_probs=29.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++||+++..| |=.|-=+......|.+.|++|.+++..
T Consensus 11 ~~~kv~ill~d---g~e~~E~~~~~~~l~~ag~~v~~vs~~ 48 (396)
T 3uk7_A 11 NSRTVLILCGD---YMEDYEVMVPFQALQAFGITVHTVCPG 48 (396)
T ss_dssp CCCEEEEECCT---TEEHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cCCeEEEEeCC---CccHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 34789999877 444445667788999999999999875
No 249
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=46.47 E-value=29 Score=24.14 Aligned_cols=36 Identities=11% Similarity=-0.074 Sum_probs=23.2
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.|+++|.. +.+........++..|+++|+.|..+..
T Consensus 6 ~vv~~HG~-~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 41 (176)
T 2qjw_A 6 HCILAHGF-ESGPDALKVTALAEVAERLGWTHERPDF 41 (176)
T ss_dssp EEEEECCT-TCCTTSHHHHHHHHHHHHTTCEEECCCC
T ss_pred EEEEEeCC-CCCccHHHHHHHHHHHHHCCCEEEEeCC
Confidence 46666643 3222222355889999999998876654
No 250
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=46.44 E-value=15 Score=26.91 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=23.8
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+++|-- + |+++ .-..++..|+++|++|..+-..
T Consensus 6 ~vv~lHG~-~-~~~~-~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 6 HFVLVHNA-Y-HGAW-IWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp EEEEECCT-T-CCGG-GGTTHHHHHHHTTCEEEEECCT
T ss_pred cEEEECCC-C-Cccc-cHHHHHHHHHhCCCEEEEecCC
Confidence 46666643 2 3333 3457889999999999888643
No 251
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=46.43 E-value=66 Score=21.83 Aligned_cols=60 Identities=8% Similarity=0.057 Sum_probs=37.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
+++||+++-.| +...-.+...|.+.|+++.+.+.. +...+.+.......++...+-.+|.
T Consensus 4 ~~~~ILivdd~------~~~~~~l~~~L~~~~~~~~v~~~~-~~~~a~~~l~~~~~dlii~D~~l~~ 63 (144)
T 3kht_A 4 RSKRVLVVEDN------PDDIALIRRVLDRKDIHCQLEFVD-NGAKALYQVQQAKYDLIILDIGLPI 63 (144)
T ss_dssp -CEEEEEECCC------HHHHHHHHHHHHHTTCCEEEEEES-SHHHHHHHHTTCCCSEEEECTTCGG
T ss_pred CCCEEEEEeCC------HHHHHHHHHHHHhcCCCeeEEEEC-CHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 45789999888 555556778888999985554433 3333344333344666666544554
No 252
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=46.34 E-value=35 Score=27.30 Aligned_cols=43 Identities=12% Similarity=0.031 Sum_probs=31.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+..+|+++.|++...--..++-.+..++.+.|+++.+.....+
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 104 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKYNMILANSDND 104 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 3468999999976544455666677778889999988765544
No 253
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=46.23 E-value=15 Score=30.58 Aligned_cols=35 Identities=34% Similarity=0.600 Sum_probs=24.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++++|+++ +-|+.| ..+|.+|+++|++|+++-...
T Consensus 22 ~~~dV~IV--GaG~aG-----l~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVI--GAGIGG-----LSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEE--CCSHHH-----HHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEE--CCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 34678776 222334 468999999999999996553
No 254
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=46.13 E-value=24 Score=28.79 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=23.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+++ |.|. +=..+|..|++.||+|+++...
T Consensus 4 ~mki~ii----G~G~---~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVL----GLGN---GGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEE----CCSH---HHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEE----CCCH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 5799987 4442 3335678889999999988643
No 255
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=45.77 E-value=24 Score=26.68 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=22.9
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++| + .|+.-..--..+..|+++|+.|..+-.
T Consensus 24 ~vvllH-G--~~~~~~~w~~~~~~L~~~g~~vi~~D~ 57 (276)
T 1zoi_A 24 VIHFHH-G--WPLSADDWDAQLLFFLAHGYRVVAHDR 57 (276)
T ss_dssp EEEEEC-C--TTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred eEEEEC-C--CCcchhHHHHHHHHHHhCCCEEEEecC
Confidence 477777 3 333223334678889999999988764
No 256
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=45.76 E-value=24 Score=27.56 Aligned_cols=45 Identities=11% Similarity=0.050 Sum_probs=33.0
Q ss_pred cCCCceEEEEeCCCCC--CchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 5 RSSKLNVAIIHPDLGI--GGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgi--GGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+..+|+++.|++.. .=-.+++-.+..++.+.|+++.++....+
T Consensus 5 ~~~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 51 (288)
T 3gv0_A 5 TGKTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQYHLVVTPHIHA 51 (288)
T ss_dssp --CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSCEEEECCBSSG
T ss_pred cCCCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCCEEEEecCCcc
Confidence 4455789999999763 44566677777888889999998876544
No 257
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=45.50 E-value=19 Score=27.03 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=22.8
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++| +++ +.++ .--..+..|+++|+.|..+-.
T Consensus 21 ~vvllH-G~~-~~~~-~~~~~~~~L~~~g~~vi~~D~ 54 (273)
T 1a8s_A 21 PIVFSH-GWP-LNAD-SWESQMIFLAAQGYRVIAHDR 54 (273)
T ss_dssp EEEEEC-CTT-CCGG-GGHHHHHHHHHTTCEEEEECC
T ss_pred EEEEEC-CCC-CcHH-HHhhHHhhHhhCCcEEEEECC
Confidence 477777 322 2333 334678899999999988754
No 258
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=45.41 E-value=26 Score=28.18 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+|+ ++|.=| ..+|..|++.||+|+++...
T Consensus 2 ~m~~I~ii--G~G~mG-----~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFI--GLGHMG-----APMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEE--CCSTTH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEE--eecHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 46899998 444323 25788899999999988543
No 259
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=45.40 E-value=27 Score=27.43 Aligned_cols=26 Identities=38% Similarity=0.453 Sum_probs=20.4
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+--+=-.+|.+|+++|++|.++..
T Consensus 18 Gas~gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 18 GGARRIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45555667889999999999988764
No 260
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=45.30 E-value=30 Score=28.09 Aligned_cols=43 Identities=12% Similarity=-0.047 Sum_probs=32.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+...|+++.|++..---..++-.+..++.++|+++.+..+..+
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 111 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGLQLLLGYTAYS 111 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3457999999976655567777788888999999988876544
No 261
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=45.30 E-value=27 Score=28.85 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=24.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+|||+++ |.| .+=.-+|..|++.||+|+++..
T Consensus 3 ~mkI~Ii----GaG---~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIV----GAG---AVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CCCEEEE----SCC---HHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEEE----CcC---HHHHHHHHHHHHCCCEEEEEEC
Confidence 5899988 333 2334578899999999999874
No 262
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=45.11 E-value=35 Score=27.29 Aligned_cols=42 Identities=5% Similarity=0.086 Sum_probs=29.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+..+|+++.|++...--..++-.+..++.+.|+++.+.....
T Consensus 59 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 100 (330)
T 3ctp_A 59 NSKTIGLMVPNISNPFFNQMASVIEEYAKNKGYTLFLCNTDD 100 (330)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 346799999997544345566666777788999998876543
No 263
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=45.06 E-value=12 Score=31.32 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=27.2
Q ss_pred CceEEEEeCCCCCCchHHHH-----HHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLI-----VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlv-----vdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+++- |.-.+||=+ ..++++|.++||+|..+-..
T Consensus 3 ~~~v~vl~---gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 3 KENICIVF---GGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp CEEEEEEE---ECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CcEEEEEE---CCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 57899886 334567743 45678899999999988654
No 264
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=44.88 E-value=26 Score=28.90 Aligned_cols=32 Identities=34% Similarity=0.484 Sum_probs=24.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+||+++ | || .....++.+++++|++|..+...
T Consensus 2 ~~Ilil----g-~g--~~~~~~~~a~~~~G~~v~~~~~~ 33 (365)
T 2z04_A 2 LTVGIL----G-GG--QLGWMTILEGRKLGFKFHVLEDK 33 (365)
T ss_dssp CEEEEE----C-CS--HHHHHHHHHHGGGTCEEEEECSS
T ss_pred CEEEEE----C-CC--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 578776 2 33 56778899999999999888754
No 265
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=44.79 E-value=30 Score=26.82 Aligned_cols=42 Identities=21% Similarity=0.130 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+..+|+++.|++..---..++-.+..+..+.|+++.++.+..
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~ 45 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGVNLRVLEAGG 45 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTCEEEEEECSS
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 356899999998665556667677777788899998887664
No 266
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=44.56 E-value=25 Score=26.43 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=22.9
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.|+++| + .|+.-..--.++..|+++|++|..+-.
T Consensus 21 ~vvllH-G--~~~~~~~w~~~~~~l~~~g~~vi~~D~ 54 (274)
T 1a8q_A 21 PVVFIH-G--WPLNGDAWQDQLKAVVDAGYRGIAHDR 54 (274)
T ss_dssp EEEEEC-C--TTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred eEEEEC-C--CcchHHHHHHHHHHHHhCCCeEEEEcC
Confidence 477777 3 333223344677889999999988764
No 267
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=44.49 E-value=44 Score=22.57 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=24.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 5 ~~~~iLivdd~------~~~~~~l~~~l~~~g~~v~~~~ 37 (140)
T 3grc_A 5 PRPRILICEDD------PDIARLLNLMLEKGGFDSDMVH 37 (140)
T ss_dssp CCSEEEEECSC------HHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEEcCC------HHHHHHHHHHHHHCCCeEEEEC
Confidence 35799999888 4555567778888999975443
No 268
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=44.20 E-value=71 Score=21.56 Aligned_cols=58 Identities=5% Similarity=0.058 Sum_probs=35.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
+++||+++-.+ +...-.+...|.+.|++|..++ +...+.+.......++....-.+|.
T Consensus 5 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~---~~~~a~~~l~~~~~dlvi~D~~l~~ 62 (136)
T 3kto_A 5 HHPIIYLVDHQ------KDARAALSKLLSPLDVTIQCFA---SAESFMRQQISDDAIGMIIEAHLED 62 (136)
T ss_dssp --CEEEEECSC------HHHHHHHHHHHTTSSSEEEEES---SHHHHTTSCCCTTEEEEEEETTGGG
T ss_pred CCCeEEEEcCC------HHHHHHHHHHHHHCCcEEEEeC---CHHHHHHHHhccCCCEEEEeCcCCC
Confidence 35789999887 4555567777888899987544 3233344444444677776545665
No 269
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=44.06 E-value=27 Score=26.23 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=22.9
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++| + .|+.-+.--..+..|+++|+.|..+-.
T Consensus 23 ~vvllH-G--~~~~~~~w~~~~~~l~~~g~~vi~~D~ 56 (275)
T 1a88_A 23 PVVFHH-G--WPLSADDWDNQMLFFLSHGYRVIAHDR 56 (275)
T ss_dssp EEEEEC-C--TTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred eEEEEC-C--CCCchhhHHHHHHHHHHCCceEEEEcC
Confidence 477777 3 333222334677889999999988764
No 270
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=43.97 E-value=20 Score=30.35 Aligned_cols=42 Identities=14% Similarity=0.155 Sum_probs=25.0
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEE-EEEeec
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVH-VFTAHH 48 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~-l~T~~~ 48 (176)
++++||||+++--.- =|+=+ ...+..+|+++ |+++. ++|..|
T Consensus 21 ~~~~m~ki~~v~Gtr--~~~~~-~a~li~~l~~~~~~~~~~~~tG~h 64 (396)
T 3dzc_A 21 QSNAMKKVLIVFGTR--PEAIK-MAPLVQQLCQDNRFVAKVCVTGQH 64 (396)
T ss_dssp ---CCEEEEEEECSH--HHHHH-HHHHHHHHHHCTTEEEEEEECCSS
T ss_pred HhCCCCeEEEEEecc--HhHHH-HHHHHHHHHhCCCCcEEEEEeccc
Confidence 345678999885331 12323 35788889887 78885 555544
No 271
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=43.82 E-value=29 Score=27.96 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=31.2
Q ss_pred CceEEEEeCCCCC-CchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGI-GGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgi-GGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+++|+++.|++.. .=-..++-.+..+..+.|+++.++....+
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~ 45 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERD 45 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 4689999999755 44556666677777888999998866544
No 272
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=43.71 E-value=55 Score=24.25 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCCCchHHHH--HHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLI--VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlv--vdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|++++..+ |-.||+. ..+|+..++.|++|+++-+.
T Consensus 8 ~kl~II~~s---g~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 8 KKLSIIVFS---GTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp CEEEEEECC---CSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEc---CCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 467777665 4589864 45677788899999998765
No 273
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=43.60 E-value=33 Score=27.42 Aligned_cols=43 Identities=14% Similarity=0.043 Sum_probs=30.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+..+|+++.|++...--..++-.+..++.+.|+++.+..+..|
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 101 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKYNIILSNSDQN 101 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTCEEEEEECCSH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4568999999976655566676777778889999988765533
No 274
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=43.58 E-value=56 Score=26.79 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.++||.+.-+. +=|==.+++++|.+++++|++|.++...
T Consensus 5 g~l~I~~~~kg--GvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 5 GRLKVFLGAAP--GVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCEEEEEESST--TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEEECCC--CCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 34566665544 6677888999999999999999877764
No 275
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=43.52 E-value=11 Score=28.75 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=27.3
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeE
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNV 41 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V 41 (176)
.++|||+++--+. -|..|+++-.+|..+.+.|++|
T Consensus 4 ~~~~kiliiy~S~-~GnT~~lA~~ia~~l~~~~~~v 38 (193)
T 3d7n_A 4 NSSSNTVVVYHSG-YGHTHRMAEAVAEGAEATLHAI 38 (193)
T ss_dssp --CCCEEEEECCS-SSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCEEEEEEECC-ChHHHHHHHHHHHHhhhcceEe
Confidence 4578999888774 6899999999999998876665
No 276
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=43.46 E-value=51 Score=23.04 Aligned_cols=58 Identities=9% Similarity=0.027 Sum_probs=34.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
+++||+++-.+ +...-.+...|.+.|++|..++ +...+.+...+...++....--+|.
T Consensus 6 ~~~~ILivdd~------~~~~~~l~~~L~~~g~~v~~~~---~~~~al~~l~~~~~dlii~D~~l~~ 63 (154)
T 3gt7_A 6 RAGEILIVEDS------PTQAEHLKHILEETGYQTEHVR---NGREAVRFLSLTRPDLIISDVLMPE 63 (154)
T ss_dssp -CCEEEEECSC------HHHHHHHHHHHHTTTCEEEEES---SHHHHHHHHTTCCCSEEEEESCCSS
T ss_pred CCCcEEEEeCC------HHHHHHHHHHHHHCCCEEEEeC---CHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 46799999887 5555567788888899886543 2222333333333555555444554
No 277
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=43.14 E-value=31 Score=26.54 Aligned_cols=27 Identities=19% Similarity=0.183 Sum_probs=20.9
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 8 Gas~gIG~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 8 GCATGIGAATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 555566677899999999999887543
No 278
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=43.08 E-value=45 Score=26.43 Aligned_cols=43 Identities=5% Similarity=-0.018 Sum_probs=29.3
Q ss_pred CCCceEEEEeCCCC---CCchHH-HHHHHHHHHHHC--CC-eEEEEEeec
Q 046633 6 SSKLNVAIIHPDLG---IGGAER-LIVDAAVELVSH--GH-NVHVFTAHH 48 (176)
Q Consensus 6 ~~~~kI~~~hpdLg---iGGAER-lvvdlA~~l~~~--Gh-~V~l~T~~~ 48 (176)
.+||||+++.-+.- -++--+ ++-.++.++++. |+ +|+++-...
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL~~ 51 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYD 51 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEETTT
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEECcC
Confidence 35789999987765 555544 444556677765 68 999887653
No 279
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=43.06 E-value=29 Score=27.13 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=22.5
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+|+ |.| ..=..+|..|++.||+|+++...
T Consensus 1 m~i~ii----G~G---~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVL----GCG---ALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEE----CcC---HHHHHHHHHHHhCCCCEEEEEcC
Confidence 578776 333 23346788899999999998644
No 280
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=42.98 E-value=1e+02 Score=25.37 Aligned_cols=87 Identities=14% Similarity=0.101 Sum_probs=46.1
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC---CcccccccCCceeEEEeCCcccchhhhhHHHHHHH
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK---RRCFEETVNGTFPVTVYGDFLPRHFFYRLHALCAY 85 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~---~hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA~ 85 (176)
+||++ --|=|+- | -=+-.|+++|++.| +|+++....+. +|+.. ....+.++..++-.--.+-| .-
T Consensus 2 p~ILl-TNDDGi~-a-pGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT--~~~pl~~~~~~~~~~~~v~G------TP 69 (251)
T 2wqk_A 2 PTFLL-VNDDGYF-S-PGINALREALKSLG-RVVVVAPDRNLSGVGHSLT--FTEPLKMRKIDTDFYTVIDG------TP 69 (251)
T ss_dssp CEEEE-ECSSCTT-C-HHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC--CSSCEEEEEEETTEEEETTC------CH
T ss_pred CEEEE-EcCCCCC-c-HHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC--CCCCceeEEeeccceeecCC------Ch
Confidence 35554 4454652 3 33557889999999 69999887654 34432 22235555443210001112 11
Q ss_pred HHHHHHHHHHHHhcCCCcEEEE
Q 046633 86 LRCLFVALCVLLRSSSYDVIIA 107 (176)
Q Consensus 86 lR~l~~~~~~~~~~~~~DVvi~ 107 (176)
--++.+++.-++...+||+||.
T Consensus 70 aDCV~lal~~~l~~~~PDLVvS 91 (251)
T 2wqk_A 70 ADCVHLGYRVILEEKKPDLVLS 91 (251)
T ss_dssp HHHHHHHHHTTTTTCCCSEEEE
T ss_pred HHHHhhhhhhhcCCCCCCEEEe
Confidence 2233445443445678999994
No 281
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=42.90 E-value=14 Score=30.72 Aligned_cols=54 Identities=15% Similarity=0.019 Sum_probs=31.4
Q ss_pred CCceEEEEeCCCCCCch--HHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCC
Q 046633 7 SKLNVAIIHPDLGIGGA--ERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGD 69 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGA--ERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd 69 (176)
.|+||+++ ||. |.-+-.+..+|.+.|++|+.+..+.-+.. -++.. ..++.+..|
T Consensus 3 ~m~~vLiV------~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~-~~~L~--~yDvIIl~d 58 (259)
T 3rht_A 3 AMTRVLYC------GDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDV-GELLA--KQDLVILSD 58 (259)
T ss_dssp ---CEEEE------ESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCS-SHHHH--TCSEEEEES
T ss_pred CCceEEEE------CCCCchhHHHHHHHHHHhCCceEEEecccccccC-hhHHh--cCCEEEEcC
Confidence 46788888 333 33344556788899999999876633221 12222 267777765
No 282
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=42.86 E-value=27 Score=27.76 Aligned_cols=27 Identities=33% Similarity=0.363 Sum_probs=21.5
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|..++..
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 8 GGAGYIGSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 555567778899999999999987643
No 283
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=42.79 E-value=34 Score=23.08 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=23.1
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
|+.+ ++++||+++-.| +...-.+...|.+.|++|..+.
T Consensus 1 Ms~~-~~~~~ilivdd~------~~~~~~l~~~L~~~~~~v~~~~ 38 (137)
T 3hdg_A 1 MSLR-EVALKILIVEDD------TDAREWLSTIISNHFPEVWSAG 38 (137)
T ss_dssp -------CCCEEEECSC------HHHHHHHHHHHHTTCSCEEEES
T ss_pred CCcc-ccccEEEEEeCC------HHHHHHHHHHHHhcCcEEEEEC
Confidence 5533 356899999988 4445556777777788776544
No 284
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=42.69 E-value=38 Score=25.43 Aligned_cols=38 Identities=18% Similarity=0.341 Sum_probs=25.3
Q ss_pred eEEEEeCCCCCCc--hHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGG--AERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGG--AERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|+++|..-+.|| .+.....++..|+++|+.|..+-..
T Consensus 49 ~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 88 (249)
T 2i3d_A 49 IAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFR 88 (249)
T ss_dssp EEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCC
Confidence 4667775322222 3355568999999999999877653
No 285
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=42.60 E-value=35 Score=27.02 Aligned_cols=34 Identities=18% Similarity=-0.050 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+|++. ||+=.+=-.++.+|.++||+|.++.-.
T Consensus 3 ~~~vlVt------GatG~iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT------GIRGQDGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE------CCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 3566553 555567778889999999999987654
No 286
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.56 E-value=23 Score=28.36 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=25.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+|||+++-. | ....++.+++++|++|.++....
T Consensus 2 ~m~Ililg~-----g---~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYAS-----H---SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESS-----T---THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECC-----h---hHHHHHHHHHhCCCEEEEEECCC
Confidence 368888643 2 56678899999999999888763
No 287
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=42.45 E-value=56 Score=29.21 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=33.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++||+|+-.. |.=|---+.+++|.+++++|+.|.++....
T Consensus 6 ~~~~i~~~sgk-GGvGKTT~a~~lA~~lA~~G~rVLlvd~D~ 46 (589)
T 1ihu_A 6 NIPPYLFFTGK-GGVGKTSISCATAIRLAEQGKRVLLVSTDP 46 (589)
T ss_dssp SCCSEEEEECS-TTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCEEEEEeCC-CcCHHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45678877644 666777899999999999999999998764
No 288
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=42.27 E-value=34 Score=26.44 Aligned_cols=40 Identities=18% Similarity=0.099 Sum_probs=29.7
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+|+++.|++...--..++--+..++.+.|+++.+.....
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~ 42 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQN 42 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEeCCCC
Confidence 4799999997655555666667777888999998776543
No 289
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=42.17 E-value=39 Score=22.45 Aligned_cols=33 Identities=12% Similarity=-0.030 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 2 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 34 (127)
T 3i42_A 2 SLQQALIVEDY------QAAAETFKELLEMLGFQADYVM 34 (127)
T ss_dssp CCEEEEEECSC------HHHHHHHHHHHHHTTEEEEEES
T ss_pred CcceEEEEcCC------HHHHHHHHHHHHHcCCCEEEEC
Confidence 36789999887 5555667788888999876544
No 290
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=41.98 E-value=50 Score=22.29 Aligned_cols=59 Identities=17% Similarity=0.261 Sum_probs=36.1
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
.+++||+++..| +...-.+...|.+.|++|..+++. ..+.........++.+.+-.+|.
T Consensus 5 ~~~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~~~---~~a~~~l~~~~~dlii~d~~l~~ 63 (142)
T 3cg4_A 5 EHKGDVMIVDDD------AHVRIAVKTILSDAGFHIISADSG---GQCIDLLKKGFSGVVLLDIMMPG 63 (142)
T ss_dssp -CCCEEEEECSC------HHHHHHHHHHHHHTTCEEEEESSH---HHHHHHHHTCCCEEEEEESCCSS
T ss_pred CCCCeEEEEcCC------HHHHHHHHHHHHHCCeEEEEeCCH---HHHHHHHHhcCCCEEEEeCCCCC
Confidence 456799999888 555567778888899987644432 22333333334566666544554
No 291
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=41.94 E-value=35 Score=26.63 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=24.8
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|.+++ .||+--+=-.+|.+|+++|++|.++...
T Consensus 22 ~k~vlI-----TGas~gIG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILV-----LGGSGALGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEE-----ETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEE-----ECCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455554 3555566678899999999999887654
No 292
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=41.92 E-value=41 Score=28.40 Aligned_cols=53 Identities=23% Similarity=0.407 Sum_probs=33.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC-CCccccccc--CCceeEEEeC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD-KRRCFEETV--NGTFPVTVYG 68 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d-~~hcF~Et~--~G~l~V~v~G 68 (176)
+|+|+++ | ||. .=..+|..|+++|++|+++-.... .++|..+.. +| +.+.-.|
T Consensus 3 ~~~v~ii----G-~G~--~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g-~~~~~~G 58 (384)
T 2bi7_A 3 SKKILIV----G-AGF--SGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETN-VMVHVYG 58 (384)
T ss_dssp CCEEEEE----C-CSH--HHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTC-CEEETTS
T ss_pred cCCEEEE----C-cCH--HHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCC-ceEeeCC
Confidence 4688877 2 222 233678899999999999987543 456665544 44 4443344
No 293
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=41.84 E-value=33 Score=25.94 Aligned_cols=27 Identities=22% Similarity=0.169 Sum_probs=21.4
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+-.+=-.+|.+|.++|++|.++.-.
T Consensus 8 Gasg~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 8 GSASGIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 555567778899999999999987643
No 294
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=41.77 E-value=19 Score=28.81 Aligned_cols=38 Identities=11% Similarity=0.180 Sum_probs=26.7
Q ss_pred CCceEEEEeCCCCCCchHHHH-----HHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLI-----VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlv-----vdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+++--+ --+||-+ -.++++|+++||+|..+...
T Consensus 2 ~~m~v~vl~gg---~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGG---VSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECC---SHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCC---CCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 57899998521 1256554 35677888999999988765
No 295
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=41.43 E-value=53 Score=27.36 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=28.2
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~ 47 (176)
-+++||+++.++ ++|=. -+..-+..+|+++ +.++++++..
T Consensus 6 l~~~~iLvi~~~-~lGD~-i~~~P~l~~L~~~~P~a~I~~l~~~ 47 (349)
T 3tov_A 6 LDYKRIVVTFLM-HLGDV-ILTTPFLEVLRKAAPHSHITYVIDE 47 (349)
T ss_dssp CTTCEEEEECCC-CHHHH-HTTHHHHHHHHHHCTTSEEEEEEEG
T ss_pred CCCCEEEEEecC-cccHH-HHHHHHHHHHHHHCCCCEEEEEECc
Confidence 356899999987 55522 2333466777776 8999999975
No 296
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=41.42 E-value=30 Score=26.18 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=23.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|- .||.-...-.++..|+++|+.|..+-.
T Consensus 18 ~vvllHG---~~~~~~~~~~~~~~L~~~g~~vi~~D~ 51 (247)
T 1tqh_A 18 AVLLLHG---FTGNSADVRMLGRFLESKGYTCHAPIY 51 (247)
T ss_dssp EEEEECC---TTCCTHHHHHHHHHHHHTTCEEEECCC
T ss_pred EEEEECC---CCCChHHHHHHHHHHHHCCCEEEeccc
Confidence 4777774 333334455788999999999987653
No 297
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=41.37 E-value=30 Score=26.82 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=23.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+++ |.| ..--.+|.+|++.||+|.++...
T Consensus 27 ~~~~I~ii----G~G---~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGIL----GSG---DFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEE----CCS---HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEE----ccC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 45789987 444 33345678888999999887644
No 298
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=41.31 E-value=17 Score=32.44 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=23.5
Q ss_pred ccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 4 RRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 4 ~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|++++|||+++ ++|.=|. -+|..|++ ||+|+++-..
T Consensus 32 r~~~~mkIaVI--GlG~mG~-----~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 32 RGSEFMKITIS--GTGYVGL-----SNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp ---CCCEEEEE--CCSHHHH-----HHHHHHHT-TSEEEEECSC
T ss_pred cccCCCEEEEE--CcCHHHH-----HHHHHHHc-CCeEEEEecC
Confidence 45567899998 4443232 46777887 9999998654
No 299
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=41.16 E-value=37 Score=27.08 Aligned_cols=27 Identities=37% Similarity=0.497 Sum_probs=21.3
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+-.+=-.++.+|.++||+|.++...
T Consensus 12 GatG~iG~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 12 GGAGYIGSHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCcHHHHHHHHHHHHCCCcEEEEecC
Confidence 555566678899999999999987644
No 300
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=41.08 E-value=20 Score=27.12 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=23.0
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.|+++|- .|+.-..--.++..|+++|+.|..+-.
T Consensus 25 pvvllHG---~~~~~~~~~~~~~~L~~~g~~vi~~D~ 58 (279)
T 1hkh_A 25 PVVLIHG---YPLDGHSWERQTRELLAQGYRVITYDR 58 (279)
T ss_dssp EEEEECC---TTCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred cEEEEcC---CCchhhHHhhhHHHHHhCCcEEEEeCC
Confidence 4788873 333333344678899999999987764
No 301
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=41.06 E-value=53 Score=26.60 Aligned_cols=43 Identities=19% Similarity=0.145 Sum_probs=33.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
++.+|-++.-++|.|=.+-++ .+|...+.+|..|.+++..-|.
T Consensus 26 ~~G~l~vitG~MgsGKTT~lL-~~a~r~~~~g~kVli~k~~~d~ 68 (214)
T 2j9r_A 26 QNGWIEVICGSMFSGKSEELI-RRVRRTQFAKQHAIVFKPCIDN 68 (214)
T ss_dssp CSCEEEEEECSTTSCHHHHHH-HHHHHHHHTTCCEEEEECC---
T ss_pred CCCEEEEEECCCCCcHHHHHH-HHHHHHHHCCCEEEEEEeccCC
Confidence 345788888888999887665 7888889999999999876553
No 302
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=41.03 E-value=42 Score=25.63 Aligned_cols=40 Identities=13% Similarity=0.196 Sum_probs=26.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||||+++.-+..-+|.-+.+++.+..-.+.|++|.++-..
T Consensus 2 M~kilii~gS~r~~s~t~~la~~~~~~~~~~~~v~~~dl~ 41 (192)
T 3fvw_A 2 SKRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYD 41 (192)
T ss_dssp -CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCS
T ss_pred CCEEEEEEcCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCc
Confidence 4689999877766666554555444433479999988765
No 303
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=40.97 E-value=39 Score=26.18 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=25.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+||.+++ .||+--+=..+|.+|+++|++|.+...
T Consensus 6 ~~k~vlV-----TGas~gIG~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALI-----TAGTKGLGKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEE-----TTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEE-----eCCCchhHHHHHHHHHHCCCEEEEEcC
Confidence 3566655 366666777899999999999998754
No 304
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=40.90 E-value=38 Score=26.75 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=20.9
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 15 Gas~gIG~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 15 GASMGIGRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 555556667899999999999887543
No 305
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=40.89 E-value=33 Score=27.74 Aligned_cols=41 Identities=22% Similarity=0.194 Sum_probs=32.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+..+|+++.|++...--..++-.+..++.++|+++.+....
T Consensus 63 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 103 (333)
T 3jvd_A 63 RSALVGVIVPDLSNEYYSESLQTIQQDLKAAGYQMLVAEAN 103 (333)
T ss_dssp -CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 34679999999766556677777888888999999988765
No 306
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=40.86 E-value=39 Score=27.21 Aligned_cols=35 Identities=20% Similarity=0.122 Sum_probs=25.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|+.+.-.
T Consensus 20 ~~~~vlVT------GatG~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFIT------GICGQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -CCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEe------CCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 44666553 555567778889999999999988654
No 307
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.70 E-value=17 Score=32.22 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=24.9
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.+++.||+++ +=|.|| +.+|..|.+.|++|+++..
T Consensus 39 ~~~KprVVII--GgG~AG-----l~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 39 HSDKPNVLIL--GSGWGA-----ISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCSSCEEEEE--CSSHHH-----HHHHHHSCTTTCEEEEEES
T ss_pred CCCCCCEEEE--CCcHHH-----HHHHHHhhhCCCcEEEECC
Confidence 4455688887 222334 4688999999999999964
No 308
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=40.64 E-value=51 Score=27.35 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=30.1
Q ss_pred eEE-EEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVA-IIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~-~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|++ ++.|.-|.|-+++..-.+...|.++|.++.++.+.
T Consensus 26 ~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~ 64 (337)
T 2qv7_A 26 RARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE 64 (337)
T ss_dssp EEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec
Confidence 565 55666666668888889999999999999888665
No 309
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=40.57 E-value=23 Score=28.15 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=22.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|.+++-.
T Consensus 3 ~~~~ilVt------GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 3 HMEKIIIY------GGTGYIGKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp -CCCEEEE------TTTSTTHHHHHHHHHHTTCCEEEEECC
T ss_pred cccEEEEE------cCCchhHHHHHHHHHhCCCcEEEEECC
Confidence 35666654 222233446778888999999988755
No 310
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=40.34 E-value=20 Score=28.94 Aligned_cols=35 Identities=17% Similarity=0.008 Sum_probs=26.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||++. ||+=.+=-.++.+|.++||+|+.++-.
T Consensus 24 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT------GVAGFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE------CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45677663 555667778899999999999988754
No 311
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=40.28 E-value=33 Score=27.85 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=24.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+|+ ++|. .=..+|..|++.||+|+++...
T Consensus 6 ~~~~I~iI--G~G~-----mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIV--GLGS-----MGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEE--CCSH-----HHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEE--CCCH-----HHHHHHHHHHHCCCeEEEEECC
Confidence 45799998 3332 3346789999999999988644
No 312
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=40.22 E-value=84 Score=24.94 Aligned_cols=40 Identities=13% Similarity=0.064 Sum_probs=30.9
Q ss_pred CCCceEEEEeCC-CCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 6 SSKLNVAIIHPD-LGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 6 ~~~~kI~~~hpd-LgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
.+..+|+++.|+ +..---..++-.+..++.++|+++.+..
T Consensus 41 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 81 (342)
T 1jx6_A 41 QRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQ 81 (342)
T ss_dssp SSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 345689999999 6655556677777778889999998874
No 313
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=40.18 E-value=69 Score=21.55 Aligned_cols=58 Identities=14% Similarity=0.028 Sum_probs=35.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
+++||+++-.| +...-.+...|.+.| ++|..+.+ ...+.+.......++....-.+|.
T Consensus 13 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~~v~~~~~---~~~a~~~l~~~~~dlvi~D~~l~~ 71 (135)
T 3snk_A 13 KRKQVALFSSD------PNFKRDVATRLDALAIYDVRVSET---DDFLKGPPADTRPGIVILDLGGGD 71 (135)
T ss_dssp CCEEEEEECSC------HHHHHHHHHHHHHTSSEEEEEECG---GGGGGCCCTTCCCSEEEEEEETTG
T ss_pred CCcEEEEEcCC------HHHHHHHHHHHhhcCCeEEEEecc---HHHHHHHHhccCCCEEEEeCCCCC
Confidence 45689999887 555566778888999 98874443 233333333334555555434554
No 314
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=39.89 E-value=55 Score=26.93 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=25.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT------GAGGFIASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE------CCccHHHHHHHHHHHHCCCeEEEEECC
Confidence 34666553 555567778889999999999987654
No 315
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=39.83 E-value=42 Score=25.40 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=29.8
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+|+++.|++...--..++-.+..++.++|+++.+..+..+
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 43 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFS 43 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCCEEEEEeCCCc
Confidence 47999999975544455666677778889999988765433
No 316
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=39.76 E-value=50 Score=21.76 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=22.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~ 47 (176)
+|||+++ |.|+ +=..++..|.++| ++|.++...
T Consensus 5 ~~~v~I~----G~G~---iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVV----GAGK---IGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEE----CCSH---HHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEE----CCCH---HHHHHHHHHHhCCCceEEEEeCC
Confidence 4677765 4444 3345678888999 998877654
No 317
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=39.69 E-value=27 Score=28.55 Aligned_cols=31 Identities=29% Similarity=0.424 Sum_probs=22.0
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|||+++ +.|.=| .-+|..|++.||+|+++.-
T Consensus 3 mkI~Ii--GaGaiG-----~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 3 LRIAIV--GAGALG-----LYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp -CEEEE--CCSTTH-----HHHHHHHHHTSCCEEEECS
T ss_pred CEEEEE--CcCHHH-----HHHHHHHHHCCCeEEEEEc
Confidence 689988 433322 2468889999999999874
No 318
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=39.66 E-value=34 Score=30.01 Aligned_cols=35 Identities=26% Similarity=0.296 Sum_probs=27.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+|||++. ||+=.+=-.++.+|.++||+|+.++-..
T Consensus 147 ~m~VLVT------GatG~IG~~l~~~L~~~G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAIT------GSRGLVGRALTAQLQTGGHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEE------STTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCEEEEE------CCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7887763 5555677788999999999999887653
No 319
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=39.59 E-value=40 Score=25.31 Aligned_cols=33 Identities=30% Similarity=0.477 Sum_probs=22.6
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++ | |+=.+--.+|..|.+.||+|.++...
T Consensus 1 m~i~ii----G--a~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALL----G--GTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEE----T--TTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEE----c--CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 567765 3 22344456788899999999988643
No 320
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=39.39 E-value=56 Score=26.41 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=29.0
Q ss_pred CceEEEEeCCC----CCC----chH-HHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDL----GIG----GAE-RLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdL----giG----GAE-RlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|+||+++..+- +.. |.| -=++.-...|.+.|++|++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 67999999873 211 333 33556778899999999999975
No 321
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=39.37 E-value=38 Score=25.93 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=28.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+|.-+. |+=|---+.+++|.+|+++| +|.++-..
T Consensus 2 vI~v~s~K-GGvGKTT~a~~LA~~la~~g-~VlliD~D 37 (209)
T 3cwq_A 2 IITVASFK-GGVGKTTTAVHLSAYLALQG-ETLLIDGD 37 (209)
T ss_dssp EEEEEESS-TTSSHHHHHHHHHHHHHTTS-CEEEEEEC
T ss_pred EEEEEcCC-CCCcHHHHHHHHHHHHHhcC-CEEEEECC
Confidence 46666544 55578889999999999999 99888654
No 322
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=39.20 E-value=51 Score=27.30 Aligned_cols=32 Identities=28% Similarity=0.295 Sum_probs=23.0
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+||+++ |. | .....+|.++++.|++|.++...
T Consensus 2 ~~Ilil----g~-g--~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 2 KKIGII----GG-G--QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CEEEEE----CC-S--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE----CC-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 467775 22 3 34567788899999999888764
No 323
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=39.18 E-value=46 Score=26.68 Aligned_cols=43 Identities=7% Similarity=0.068 Sum_probs=30.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+..+|+++.|++..---..++-.+..++.+.|+++.+.....+
T Consensus 57 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 99 (340)
T 1qpz_A 57 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNN 99 (340)
T ss_dssp CCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 4468999999975444455666667778889999988655433
No 324
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=39.14 E-value=50 Score=24.56 Aligned_cols=37 Identities=8% Similarity=-0.103 Sum_probs=24.9
Q ss_pred ceEEEEeCCCCCCchHH---HHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAER---LIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAER---lvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+|+++|-- |. .++- .+..++..|.++|++|..+...
T Consensus 6 ~~vl~lHG~-g~-~~~~~~~~~~~l~~~l~~~g~~v~~~d~p 45 (243)
T 1ycd_A 6 PKLLFLHGF-LQ-NGKVFSEKSSGIRKLLKKANVQCDYIDAP 45 (243)
T ss_dssp CEEEEECCT-TC-CHHHHHHHTHHHHHHHHHTTCEEEEECCS
T ss_pred ceEEEeCCC-Cc-cHHHHHHHHHHHHHHHhhcceEEEEcCCC
Confidence 367777743 32 2332 3557889999999999888764
No 325
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=39.04 E-value=33 Score=28.54 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=31.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.++|+|+-. -|.=|---+.+++|.+++++|++|.++....
T Consensus 18 ~~~i~v~sg-kGGvGKTTva~~LA~~lA~~G~rVllvD~D~ 57 (329)
T 2woo_A 18 SLKWIFVGG-KGGVGKTTTSCSLAIQMSKVRSSVLLISTDP 57 (329)
T ss_dssp TCCEEEEEC-SSSSSHHHHHHHHHHHHHTSSSCEEEEECCT
T ss_pred CCEEEEEeC-CCCCcHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 356776654 4556778899999999999999999987653
No 326
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=38.97 E-value=55 Score=24.49 Aligned_cols=34 Identities=12% Similarity=-0.041 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~ 47 (176)
+|+|++. ||+-.+=-.++.+|.++ |++|..++..
T Consensus 4 ~~~ilVt------GasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 4 LPTVLVT------GASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CCEEEEE------STTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCEEEEE------cCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 4566553 55666777889999999 8999987654
No 327
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=38.87 E-value=80 Score=27.08 Aligned_cols=39 Identities=18% Similarity=0.329 Sum_probs=31.9
Q ss_pred ceEEEEe-CCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIH-PDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~h-pdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||.++. -+|...|.-+.-.+--.-+.+.||+|+++-..
T Consensus 2 mricifmarglegcgvtkfsleqrdwfiknghevtlvyak 41 (401)
T 1xv5_A 2 MRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAK 41 (401)
T ss_dssp CEEEEEETTCCCSSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ceEEEEeeccccccCceeeehhhhhhhhcCCcEEEEEEec
Confidence 6777554 56777888888888888899999999999765
No 328
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=38.53 E-value=42 Score=26.81 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=23.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+|+ |. +=..--.+|..|++.||+|+++...
T Consensus 11 mm~I~iI----G~--tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAIL----GA--GGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEE----TT--TSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEE----CC--CCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3689886 33 0234446788899999999977543
No 329
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=38.53 E-value=75 Score=22.49 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=22.6
Q ss_pred ceEEEEeCCCCCCchHHHHHH--HHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVD--AAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvd--lA~~l~~~Gh~V~l~T~ 46 (176)
.-|+++|.. .|.++ .... ++..|+++|+.|..+..
T Consensus 33 ~~vv~~hG~--~~~~~-~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 33 FSVLLLHGI--RFSSE-TWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp CEEEECCCT--TCCHH-HHHHHTHHHHHHHTTCEEEEECC
T ss_pred ceEEEECCC--CCccc-eeecchhHHHHHHCCCeEEEecC
Confidence 346666643 23333 3444 68999999999987754
No 330
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=38.31 E-value=26 Score=26.36 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCCC-CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGI-GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgi-GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+++.-+... |-.++++-.++..+. .|++|.++-..
T Consensus 5 ~~Mkilii~gS~r~~g~t~~la~~i~~~l~-~g~~v~~~dl~ 45 (193)
T 1rtt_A 5 DDIKVLGISGSLRSGSYNSAALQEAIGLVP-PGMSIELADIS 45 (193)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHTTCC-TTCEEEECCCT
T ss_pred CCceEEEEECCCCCCChHHHHHHHHHHhcc-CCCeEEEEeHH
Confidence 35799988877754 445555555555555 79999887654
No 331
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=38.30 E-value=38 Score=28.82 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=17.4
Q ss_pred HHHHHHHHHCCCeEEEEEee
Q 046633 28 VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 28 vdlA~~l~~~Gh~V~l~T~~ 47 (176)
..+|..|+++|++|+++...
T Consensus 35 l~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 35 LHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCeEEEEcCC
Confidence 46899999999999999865
No 332
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=38.11 E-value=31 Score=28.08 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~ 48 (176)
++|||++ .||+=.+=-.++.+|.++ ||+|+.++...
T Consensus 23 ~~~~vlV------tGatG~iG~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 23 KAKKVLI------LGVNGFIGHHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp CCCEEEE------ESCSSHHHHHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEE------ECCCChHHHHHHHHHHhCCCCEEEEEeCCh
Confidence 4567765 355556667788899988 99999987553
No 333
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=38.07 E-value=35 Score=27.11 Aligned_cols=26 Identities=31% Similarity=0.348 Sum_probs=20.5
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+=.+=-.++.+|.++||+|..+..
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 8 GGCGFLGSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCchhHHHHHHHHHhCCCEEEEEeC
Confidence 55556667888999999999998753
No 334
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.83 E-value=33 Score=28.90 Aligned_cols=38 Identities=24% Similarity=0.313 Sum_probs=23.4
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|++ ++.+||+|+ |.| ..=..+|..|++.||+|+++...
T Consensus 1 m~~--~~~~kI~vI----GaG---~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MAS--PAAGDVLIV----GSG---LVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --------CEEEEE----CCS---HHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCC--CCCceEEEE----eeC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 544 346789998 333 22236788899999999998654
No 335
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=37.80 E-value=43 Score=26.74 Aligned_cols=42 Identities=14% Similarity=-0.086 Sum_probs=31.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
..+|+++.|++..---..++--+..++++.|+++.+.....+
T Consensus 5 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~ 46 (332)
T 2rjo_A 5 QTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPYVPLTTEGS 46 (332)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCEEEEECTTC
T ss_pred ccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEEEEecCCCC
Confidence 358999999976544456666677778889999988765533
No 336
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=37.73 E-value=35 Score=27.71 Aligned_cols=37 Identities=22% Similarity=0.045 Sum_probs=24.2
Q ss_pred CceEEEE-eCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAII-HPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~-hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
++||+++ .|+ -+.+.+.+-.+...|.++|++|.+...
T Consensus 5 mkki~ii~np~--~~~~~~~~~~i~~~l~~~g~~v~~~~~ 42 (292)
T 2an1_A 5 FKCIGIVGHPR--HPTALTTHEMLYRWLCDQGYEVIVEQQ 42 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTCEEEEEHH
T ss_pred CcEEEEEEcCC--CHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 5678765 444 577778888999999999999987653
No 337
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=37.73 E-value=54 Score=26.43 Aligned_cols=36 Identities=14% Similarity=-0.007 Sum_probs=26.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++|+|++. ||+=.+=-.++.+|.++||+|..+.-..
T Consensus 8 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~~ 43 (357)
T 1rkx_A 8 QGKRVFVT------GHTGFKGGWLSLWLQTMGATVKGYSLTA 43 (357)
T ss_dssp TTCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEE------CCCchHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45676653 6666777788999999999999877543
No 338
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=37.62 E-value=22 Score=29.18 Aligned_cols=31 Identities=32% Similarity=0.438 Sum_probs=22.8
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|||+++ |.|. +=.-+|..|++.||+|+++.-
T Consensus 3 mkI~Ii----GaGa---iG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 3 LNILVI----GTGA---IGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp CEEEEE----SCCH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEE----CcCH---HHHHHHHHHHhCCCeEEEEeC
Confidence 789987 3332 223578889999999999874
No 339
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=37.59 E-value=23 Score=28.79 Aligned_cols=39 Identities=26% Similarity=0.315 Sum_probs=30.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.++|+++--+ ..|.||+++-.+|..+ ++|.+|.++...
T Consensus 39 ~~~kv~IlYgS-~tGnte~~A~~La~~l-~~g~~v~v~~l~ 77 (219)
T 3hr4_A 39 SRVRVTILFAT-ETGKSEALAWDLGALF-SCAFNPKVVCMD 77 (219)
T ss_dssp TSCEEEEEEEC-SSSHHHHHHHHHHHHH-TTTSEEEEEEGG
T ss_pred cCCcEEEEEEC-CchHHHHHHHHHHHHH-HcCCCeEEEEcc
Confidence 45677777655 3699999999999988 689999887654
No 340
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=37.57 E-value=40 Score=27.11 Aligned_cols=33 Identities=15% Similarity=0.110 Sum_probs=22.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-C-CeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-G-HNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-G-h~V~l~T~~ 47 (176)
++|||+++ |.|+. +.++.++++. | ++|..+...
T Consensus 3 ~~~~Ili~----g~g~~----~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLIT----SAGRR----AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEE----SCTTC----HHHHHHHHHHCCSSEEEEEESC
T ss_pred ccceEEEe----cCCch----HHHHHHHHHhcCCCEEEEEeCC
Confidence 45788884 45543 5788888886 6 777776543
No 341
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=37.56 E-value=25 Score=28.07 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=22.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHC-----C-CeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSH-----G-HNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-----G-h~V~l~T~ 46 (176)
.+|||+|+ |.|. +=.-+|..|++. | |+|+++..
T Consensus 7 ~~m~I~ii----G~G~---mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 7 QPIKIAVF----GLGG---VGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CCEEEEEE----CCSH---HHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCEEEEE----CcCH---HHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 45799987 3331 222557778887 9 99998864
No 342
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=37.55 E-value=98 Score=21.23 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=30.8
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
..+|+||+++-.| +...-.+...|.+.|....+.+.. +...+.+.......++....--+|.
T Consensus 17 ~~~m~~iLivdd~------~~~~~~l~~~L~~~~~~~~v~~~~-~~~~al~~l~~~~~dlii~D~~l~~ 78 (150)
T 4e7p_A 17 RGSHMKVLVAEDQ------SMLRDAMCQLLTLQPDVESVLQAK-NGQEAIQLLEKESVDIAILDVEMPV 78 (150)
T ss_dssp ---CEEEEEECSC------HHHHHHHHHHHHTSTTEEEEEEES-SHHHHHHHHTTSCCSEEEECSSCSS
T ss_pred CCCccEEEEEcCC------HHHHHHHHHHHHhCCCcEEEEEEC-CHHHHHHHhhccCCCEEEEeCCCCC
Confidence 3467899999887 444445666677777332222222 2222333333333555555544554
No 343
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=37.40 E-value=44 Score=23.73 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=23.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+++|-. |..+.+...-.++..|+++|+.|..+...
T Consensus 6 ~vv~~HG~-~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 6 QVYIIHGY-RASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp EEEEECCT-TCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred EEEEEcCC-CCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 47777754 32222134444556788999999988765
No 344
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=37.37 E-value=49 Score=26.69 Aligned_cols=35 Identities=14% Similarity=-0.021 Sum_probs=25.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.++||+|..++-.
T Consensus 26 ~~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLIT------GVAGFIGSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEE------CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45666653 555566677889999999999988754
No 345
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=37.25 E-value=43 Score=26.99 Aligned_cols=33 Identities=27% Similarity=0.411 Sum_probs=24.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+||+++ |.| ..=..+|..+++.||+|+++...
T Consensus 4 ~~kV~VI----GaG---~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVL----GTG---VLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEE----CCC---HHHHHHHHHHHhCCCeEEEEeCC
Confidence 5689988 443 23346888999999999998644
No 346
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=37.12 E-value=61 Score=21.92 Aligned_cols=33 Identities=15% Similarity=0.240 Sum_probs=24.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 2 ~~~~ilivdd~------~~~~~~l~~~l~~~g~~v~~~~ 34 (143)
T 3jte_A 2 SLAKILVIDDE------STILQNIKFLLEIDGNEVLTAS 34 (143)
T ss_dssp -CCEEEEECSC------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCEEEEEcCC------HHHHHHHHHHHHhCCceEEEeC
Confidence 36789999888 4555567778888999887544
No 347
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=37.10 E-value=53 Score=27.99 Aligned_cols=25 Identities=16% Similarity=0.094 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 26 LIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 26 lvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
....++.+++++|++|.++.+..++
T Consensus 12 ~~~~i~~a~~~~G~~vv~v~~~~~~ 36 (451)
T 2vpq_A 12 IAVRIIRACRDLGIQTVAIYSEGDK 36 (451)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEGGGT
T ss_pred HHHHHHHHHHHcCCEEEEEeccccc
Confidence 6678999999999999999876554
No 348
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=36.99 E-value=15 Score=27.94 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=23.9
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|. .||.......++..|+++|+.|..+-.
T Consensus 30 ~vv~~HG---~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (290)
T 3ksr_A 30 GVLFVHG---WGGSQHHSLVRAREAVGLGCICMTFDL 63 (290)
T ss_dssp EEEEECC---TTCCTTTTHHHHHHHHTTTCEEECCCC
T ss_pred EEEEeCC---CCCCcCcHHHHHHHHHHCCCEEEEeec
Confidence 4566664 344455667889999999999876654
No 349
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=36.85 E-value=43 Score=26.22 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=31.4
Q ss_pred CCceEEEEeC----CCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHP----DLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hp----dLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+..+|+++.| ++...=-.+++-.+..++.++|+++.++.+.
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 49 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDE 49 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999999 6544445567777778888999999998875
No 350
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=36.69 E-value=56 Score=25.79 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=24.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
++|+|++. ||+=.+=-.++.+|.++||+|+.+.-
T Consensus 10 ~~~~vlVT------GatG~iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 10 EGSLVLVT------GANGFVASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp TTCEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE------CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 34566553 55556777888999999999988764
No 351
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=36.69 E-value=49 Score=26.92 Aligned_cols=32 Identities=19% Similarity=0.323 Sum_probs=23.2
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEE
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVF 44 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~ 44 (176)
.+.|||+++-.+ ++ -...+..|.+.||+|.+.
T Consensus 5 ~~~mki~v~~~~------~~-~~~~~~~L~~~g~~v~~~ 36 (300)
T 2rir_A 5 LTGLKIAVIGGD------AR-QLEIIRKLTEQQADIYLV 36 (300)
T ss_dssp CCSCEEEEESBC------HH-HHHHHHHHHHTTCEEEEE
T ss_pred ccCCEEEEECCC------HH-HHHHHHHHHhCCCEEEEE
Confidence 456899888443 33 346678899999999765
No 352
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=36.68 E-value=47 Score=26.85 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=23.7
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++||+|+ |.| ..=..+|..|++.||+|+++...
T Consensus 14 ~~~~I~VI----G~G---~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVI----GGG---LMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEE----CCC---HHHHHHHHHHHhCCCeEEEEECC
Confidence 35678887 333 22335788899999999988643
No 353
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=36.65 E-value=72 Score=24.37 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=25.9
Q ss_pred ceEEEEeCCCCCCch-HHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 9 LNVAIIHPDLGIGGA-ERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 9 ~kI~~~hpdLgiGGA-ERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|||+++.-+...++. .+++-.++.++ +.|++|+++-...
T Consensus 1 MkiLiI~gspr~~s~t~~l~~~~~~~~-~~g~~v~~~dL~~ 40 (196)
T 3lcm_A 1 MKILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDLYA 40 (196)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHS-CTTSEEEEEETTT
T ss_pred CEEEEEEeCCCCCChHHHHHHHHHHHh-cCCCeEEEEEccc
Confidence 688877655545554 44444445556 7899999988763
No 354
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=36.54 E-value=68 Score=22.74 Aligned_cols=36 Identities=17% Similarity=-0.015 Sum_probs=22.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|. .|....+.....++..|+++|+.|..+..
T Consensus 37 ~vv~~hG-~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 72 (223)
T 2o2g_A 37 IVLFAHG-SGSSRYSPRNRYVAEVLQQAGLATLLIDL 72 (223)
T ss_dssp EEEEECC-TTCCTTCHHHHHHHHHHHHHTCEEEEECS
T ss_pred EEEEecC-CCCCCCccchHHHHHHHHHCCCEEEEEcC
Confidence 3445554 33222222345788999999999887754
No 355
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=36.54 E-value=47 Score=26.07 Aligned_cols=42 Identities=14% Similarity=0.069 Sum_probs=28.2
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+|+++.|+.+..--..+.--+..++.+.|+++.+..+..+
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~l~~~~~~~~ 43 (306)
T 2vk2_A 2 PLTVGFSQVGSESGWRAAETNVAKSEAEKRGITLKIADGQQK 43 (306)
T ss_dssp CCEEEEEECCCCSHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCEEEEeCCCCC
Confidence 468999999965433334444455677788999988765433
No 356
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=36.37 E-value=1.5e+02 Score=26.08 Aligned_cols=118 Identities=14% Similarity=0.023 Sum_probs=60.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccchhhhhHHHHHHHHH
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPRHFFYRLHALCAYLR 87 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr~i~gr~~alcA~lR 87 (176)
.+|+++. ||..++ ..++..|.+.|.+|..+.+.+. +.-|++...++ |. .+|.. -++
T Consensus 313 Gkrv~i~------~~~~~~-~~l~~~L~elGm~vv~~~~~~~-~~~~~~~~~~~--v~-~~D~~-------------~le 368 (458)
T 3pdi_B 313 SARTAIA------ADPDLL-LGFDALLRSMGAHTVAAVVPAR-AAALVDSPLPS--VR-VGDLE-------------DLE 368 (458)
T ss_dssp TCEEEEE------CCHHHH-HHHHHHHHTTTCEEEEEEESSC-CSCCTTTTSSC--EE-ESHHH-------------HHH
T ss_pred CCEEEEE------CCcHHH-HHHHHHHHHCCCEEEEEEECCC-ChhhhhCccCc--EE-eCCHH-------------HHH
Confidence 4678773 556654 5899999999999987666542 22344432222 22 24410 011
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCCC------ccchheecccCceeeccccccccccchhhcccchhHHHHHHHHHHHHHH
Q 046633 88 CLFVALCVLLRSSSYDVIIADQVS------VVIPVLKLRSSTKVFMLNIARYMQILELLLFEVLFFLARYYSTVIFRIC 160 (176)
Q Consensus 88 ~l~~~~~~~~~~~~~DVvi~Dqvs------~~iP~l~l~~~~~vlf~~~~~YcHFPd~Ll~~~~~~lk~lYr~p~d~~E 160 (176)
-.+...+||++|-.+-. ..||+++.= -| +|-+ .-+-+.|-.=..--.+++..+|+.-+|-..
T Consensus 369 -------~~i~~~~pDllig~~~~~~~a~k~gip~~~~g--fP-i~dr-~~~~~~p~~Gy~Ga~~l~~~i~n~l~~~~~ 436 (458)
T 3pdi_B 369 -------HAARAGQAQLVIGNSHALASARRLGVPLLRAG--FP-QYDL-LGGFQRCWSGYRGSSQVLFDLANLLVEHHQ 436 (458)
T ss_dssp -------HHHHHHTCSEEEECTTHHHHHHHTTCCEEECS--SC-CTTC-TTGGGCCCCHHHHHHHHHHHHHHHHHHTC-
T ss_pred -------HHHHhcCCCEEEEChhHHHHHHHcCCCEEEec--CC-ccee-cCccCCCeeeHhhHHHHHHHHHHHHHhhhc
Confidence 12345689999977642 245666521 01 1100 001112221111133578888887777544
No 357
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=36.35 E-value=23 Score=30.26 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=24.9
Q ss_pred CCCceEEEEeCCCCC-CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGI-GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgi-GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
...+||+|+ ++|. || .+|.+|++.|++|.++...
T Consensus 6 ~~~~kIgII--G~G~mG~------slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 6 DISRPVCIL--GLGLIGG------SLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CCSSCEEEE--CCSHHHH------HHHHHHHHTTCCEEEECSC
T ss_pred CCCCEEEEE--eecHHHH------HHHHHHHHCCCEEEEEeCC
Confidence 345789988 4442 44 5789999999999988644
No 358
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.30 E-value=42 Score=25.50 Aligned_cols=27 Identities=15% Similarity=0.114 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 9 Gas~gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 9 GASRGIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 555567778899999999998877543
No 359
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=36.26 E-value=38 Score=25.87 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=30.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
..+|+++.|++..---..++-.+-.+++++|+++.+.....+
T Consensus 3 s~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 44 (275)
T 3d8u_A 3 AYSIALIIPSLFEKACAHFLPSFQQALNKAGYQLLLGYSDYS 44 (275)
T ss_dssp -CEEEEEESCSSCHHHHHHHHHHHHHHHHTSCEECCEECTTC
T ss_pred ceEEEEEeCCCccccHHHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 357999999975544455666667778889999988765533
No 360
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=36.25 E-value=20 Score=30.38 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=23.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
++|++++ .||.+ ..-+.++.++.|++|++++...+
T Consensus 5 ~k~l~Il-----~~~~~--~~~i~~aa~~lG~~vv~v~~~~~ 39 (425)
T 3vot_A 5 NKNLAII-----CQNKH--LPFIFEEAERLGLKVTFFYNSAE 39 (425)
T ss_dssp CCEEEEE-----CCCTT--CCHHHHHHHHTTCEEEEEEETTS
T ss_pred CcEEEEE-----CCChh--HHHHHHHHHHCCCEEEEEECCCc
Confidence 4578876 22322 23456777889999999987654
No 361
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=36.17 E-value=43 Score=25.89 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=26.8
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+..+|+++.|+ ..---..++-.+..++.+.|+++.+....
T Consensus 6 ~~~~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (288)
T 2qu7_A 6 GRSNIIAFIVPD-QNPFFTEVLTEISHECQKHHLHVAVASSE 46 (288)
T ss_dssp -CEEEEEEEESS-CCHHHHHHHHHHHHHHGGGTCEEEEEECT
T ss_pred CCCCEEEEEECC-CCchHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345689999998 33323445555566677789998876554
No 362
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=36.14 E-value=37 Score=25.39 Aligned_cols=35 Identities=17% Similarity=-0.056 Sum_probs=23.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..|+++|-- |+.-+.--..+..|+++|++|..+-.
T Consensus 20 ~~vvllHG~---~~~~~~w~~~~~~l~~~g~~vi~~D~ 54 (271)
T 3ia2_A 20 KPVLFSHGW---LLDADMWEYQMEYLSSRGYRTIAFDR 54 (271)
T ss_dssp SEEEEECCT---TCCGGGGHHHHHHHHTTTCEEEEECC
T ss_pred CeEEEECCC---CCcHHHHHHHHHHHHhCCceEEEecC
Confidence 357787743 33223344567889999999988764
No 363
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=36.09 E-value=47 Score=26.52 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=20.5
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.||+=.+=-.++.+|.++||+|..++-
T Consensus 11 TGatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 11 TGASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 355556667788899999999987653
No 364
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=35.84 E-value=59 Score=21.75 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=24.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 2 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 34 (140)
T 2qr3_A 2 SLGTIIIVDDN------KGVLTAVQLLLKNHFSKVITLS 34 (140)
T ss_dssp CCCEEEEECSC------HHHHHHHHHHHTTTSSEEEEEC
T ss_pred CCceEEEEeCC------HHHHHHHHHHHHhCCcEEEEeC
Confidence 46789999888 4455567777888899887443
No 365
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=35.60 E-value=60 Score=28.10 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=27.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+++|+++ .|| -.-+++|..|++.|.+|+++....
T Consensus 193 ~~~~vvVI-----GgG--~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 193 DIKRVAVV-----GAG--YIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp TCCEEEEE-----CCS--HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEE-----CCC--HHHHHHHHHHHHCCCeEEEEEccc
Confidence 45788886 233 467789999999999999998653
No 366
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=35.54 E-value=47 Score=26.95 Aligned_cols=42 Identities=12% Similarity=0.140 Sum_probs=29.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
..+|+++.|++...=-..++-.+..++.+.|+++.+.....+
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 107 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGLATIITNSNED 107 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 457999999975443445666666777889999988765433
No 367
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=35.50 E-value=12 Score=27.02 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=23.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++| + .||.......++..|+++|+.|..+-.
T Consensus 26 ~vv~~h-G--~~~~~~~~~~~~~~l~~~G~~v~~~d~ 59 (238)
T 1ufo_A 26 LLLALH-G--LQGSKEHILALLPGYAERGFLLLAFDA 59 (238)
T ss_dssp EEEEEC-C--TTCCHHHHHHTSTTTGGGTEEEEECCC
T ss_pred EEEEEC-C--CcccchHHHHHHHHHHhCCCEEEEecC
Confidence 455555 3 345445557788999999998877653
No 368
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=35.41 E-value=26 Score=28.43 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=17.0
Q ss_pred HHHHHHHHHCCCeEEEEEee
Q 046633 28 VDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 28 vdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+|.+|+++|++|+++-..
T Consensus 30 l~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 30 SAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp HHHHHHHHHTTCCEEEECSS
T ss_pred HHHHHHHHhCCCcEEEEeCC
Confidence 36888999999999999754
No 369
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=35.38 E-value=72 Score=27.22 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=28.1
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
++..+.-.- .-|--.++.++|...+++|..|.+++..+.
T Consensus 64 ~ii~I~G~p-GsGKTtLal~la~~~~~~g~~vlyid~E~s 102 (356)
T 1u94_A 64 RIVEIYGPE-SSGKTTLTLQVIAAAQREGKTCAFIDAEHA 102 (356)
T ss_dssp SEEEEECST-TSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred eEEEEECCC-CCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 344444332 335677888999999999999999988754
No 370
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=35.35 E-value=30 Score=29.33 Aligned_cols=42 Identities=17% Similarity=0.016 Sum_probs=28.1
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHH------HCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELV------SHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~------~~Gh~V~l~T~~ 47 (176)
.+++||..+...-|+=|---+.+++|.+|+ ++|+.|.++=..
T Consensus 108 ~~~~~vIav~s~KGGvGKTT~a~nLA~~LA~~g~~~~~g~rVlliD~D 155 (403)
T 3ez9_A 108 HKSPYVIFVVNLKGGVSKTVSTVTLAHALRVHQDLLRHDLRILVIDLD 155 (403)
T ss_dssp SCSCEEEEECCC--------CHHHHHHHHHSCGGGGGGCCCEEEEEES
T ss_pred CCCceEEEEEcCCCCchHHHHHHHHHHHHHhcchhhcCCCeEEEEeCC
Confidence 356788888777777788899999999999 689999988654
No 371
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=35.20 E-value=41 Score=26.57 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=23.9
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|+++|- .||.-.....++..|+++|+.|..+-..
T Consensus 99 vv~~HG---~~~~~~~~~~~~~~la~~G~~vv~~d~~ 132 (306)
T 3vis_A 99 IAISPG---YTGTQSSIAWLGERIASHGFVVIAIDTN 132 (306)
T ss_dssp EEEECC---TTCCHHHHHHHHHHHHTTTEEEEEECCS
T ss_pred EEEeCC---CcCCHHHHHHHHHHHHhCCCEEEEecCC
Confidence 556664 3444445578999999999998877654
No 372
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=35.17 E-value=37 Score=26.54 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=23.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++|||+|+ |.| +.--.+|..|++.|++|.++...
T Consensus 2 ~~m~i~ii----G~G---~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGII----GVG---KMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEE----CCS---HHHHHHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEE----CCC---HHHHHHHHHHHhCCCeEEEECCC
Confidence 46899987 333 22335688889999999877543
No 373
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=35.10 E-value=60 Score=25.66 Aligned_cols=26 Identities=19% Similarity=0.314 Sum_probs=20.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+--+=-.+|.+|+++|++|.+...
T Consensus 16 Gas~gIG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 16 GGGRGIGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 45555666789999999999988754
No 374
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=35.04 E-value=22 Score=27.98 Aligned_cols=44 Identities=7% Similarity=0.064 Sum_probs=32.9
Q ss_pred CCCceEEEEeCC-----CCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 6 SSKLNVAIIHPD-----LGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 6 ~~~~kI~~~hpd-----LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+..+|+++.|+ +...=-.+++-.+..+++++|+++.++....+
T Consensus 20 ~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~ 68 (305)
T 3huu_A 20 NKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSENS 68 (305)
T ss_dssp -CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCSSH
T ss_pred CCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 345689999999 65555567777777888899999998766543
No 375
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=35.02 E-value=62 Score=25.18 Aligned_cols=43 Identities=12% Similarity=0.101 Sum_probs=32.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+..+|+++. ++...=-..++-.+..++.++|+++.+.....+.
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 53 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGYDVMLSAVAPSR 53 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTCEEEEEEEBTTB
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCCEEEEEeCCCCH
Confidence 446799998 8765556677777888889999999998877554
No 376
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=34.91 E-value=61 Score=25.39 Aligned_cols=26 Identities=19% Similarity=0.273 Sum_probs=20.1
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+--+=-.+|.+|+++|++|.+...
T Consensus 15 Gas~GIG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 15 GAGRDIGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 55555666789999999999988743
No 377
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.82 E-value=56 Score=25.44 Aligned_cols=26 Identities=27% Similarity=0.314 Sum_probs=19.5
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+--+=-.+|.+|+++|++|.+...
T Consensus 16 Gas~giG~~ia~~l~~~G~~V~~~~r 41 (260)
T 2ae2_A 16 GGSRGIGYGIVEELASLGASVYTCSR 41 (260)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 44445556789999999999988753
No 378
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=34.70 E-value=35 Score=25.92 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=22.5
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
-|+++|-- + +.++ .--.++..|+++|+.|..+-.
T Consensus 25 pvvllHG~-~-~~~~-~~~~~~~~L~~~g~~vi~~D~ 58 (277)
T 1brt_A 25 PVVLIHGF-P-LSGH-SWERQSAALLDAGYRVITYDR 58 (277)
T ss_dssp EEEEECCT-T-CCGG-GGHHHHHHHHHTTCEEEEECC
T ss_pred eEEEECCC-C-CcHH-HHHHHHHHHhhCCCEEEEeCC
Confidence 37777743 2 2233 334678899999999987754
No 379
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=34.57 E-value=60 Score=25.10 Aligned_cols=41 Identities=2% Similarity=-0.074 Sum_probs=29.5
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCC-eEEEEEeecC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGH-NVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh-~V~l~T~~~d 49 (176)
.+|+++.|++...--.+++--+..+..++|+ ++.+..+..|
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~ 44 (309)
T 2fvy_A 3 TRIGVTIYKYDDNFMSVVRKAIEQDAKAAPDVQLLMNDSQND 44 (309)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTTEEEEEEECTTC
T ss_pred cEEEEEeccCCcHHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 4799999987654445666666777788998 8887765433
No 380
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=34.53 E-value=30 Score=27.76 Aligned_cols=34 Identities=29% Similarity=0.420 Sum_probs=23.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
||||+|+ ++|.=| ..+|..|++.||+|+++....
T Consensus 1 M~~I~ii--G~G~mG-----~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 1 MTTYGFL--GLGIMG-----GPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCCEEEE--CCSTTH-----HHHHHHHHHHTCCEEEECSSG
T ss_pred CCeEEEE--ccCHHH-----HHHHHHHHHCCCeEEEEcCCH
Confidence 3689888 444323 246888889999999886543
No 381
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=34.53 E-value=29 Score=29.46 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=26.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDK 50 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~ 50 (176)
+|||+|+= .....+...++|.+.||+|..+.+++|+
T Consensus 2 ~mrivf~G-------tp~fa~~~L~~L~~~~~~v~~Vvt~pd~ 37 (314)
T 3tqq_A 2 SLKIVFAG-------TPQFAVPTLRALIDSSHRVLAVYTQPDR 37 (314)
T ss_dssp CCEEEEEE-------CSGGGHHHHHHHHHSSSEEEEEECCCC-
T ss_pred CcEEEEEC-------CCHHHHHHHHHHHHCCCeEEEEEeCCCC
Confidence 58999973 3345567778888999999888877664
No 382
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=34.50 E-value=68 Score=22.13 Aligned_cols=36 Identities=6% Similarity=-0.036 Sum_probs=21.9
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEE
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVH 42 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~ 42 (176)
|+....+++||+++-.+ +...-.+...|.+.|+...
T Consensus 1 m~~~~~~~~~ILivdd~------~~~~~~l~~~L~~~~~~~~ 36 (149)
T 1i3c_A 1 MSDESNPPKVILLVEDS------KADSRLVQEVLKTSTIDHE 36 (149)
T ss_dssp -----CCCEEEEEECCC------HHHHHHHHHHHHSCCSCEE
T ss_pred CCcccCCCCeEEEEECC------HHHHHHHHHHHHhcCCCcc
Confidence 66666677899998887 4444556677777888433
No 383
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=34.46 E-value=34 Score=26.07 Aligned_cols=27 Identities=15% Similarity=0.094 Sum_probs=21.0
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 8 Gas~gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 8 GASSGLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp STTSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 555566678899999999999887643
No 384
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.40 E-value=33 Score=24.49 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=25.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.+|+++ |+=++-..+|..|.++|++|+++....
T Consensus 7 ~~~viIi-------G~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLV-------GYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEE-------CCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEE-------CcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3466664 334677789999999999999998653
No 385
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=34.33 E-value=47 Score=26.06 Aligned_cols=27 Identities=30% Similarity=0.251 Sum_probs=21.0
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|..+...
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 7 GGAGFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 555566678899999999999987643
No 386
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=34.32 E-value=46 Score=27.33 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=23.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+|+ |.| ..=.-+|..|++.||+|+++...
T Consensus 14 ~~kI~iI----G~G---~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVL----GAG---SWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEE----CcC---HHHHHHHHHHHhCCCeEEEEeCC
Confidence 4788887 333 23346788899999999988653
No 387
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=34.27 E-value=51 Score=26.18 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=22.1
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
++|||+|+ ++|.=|. .+|..|++.||+|+++..
T Consensus 3 ~~~~i~ii--G~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFI--GLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEE--CCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEE--CccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 35799998 3333232 357788889999987654
No 388
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=34.24 E-value=49 Score=24.33 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=22.4
Q ss_pred EEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 11 VAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 11 I~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|+++| +. ||.-.....++..|+++|+.|..+-.
T Consensus 45 vv~~h-G~--~~~~~~~~~~~~~l~~~g~~v~~~d~ 77 (303)
T 3pe6_A 45 IFVSH-GA--GEHSGRYEELARMLMGLDLLVFAHDH 77 (303)
T ss_dssp EEEEC-CT--TCCGGGGHHHHHHHHHTTEEEEEECC
T ss_pred EEEEC-CC--CchhhHHHHHHHHHHhCCCcEEEeCC
Confidence 44555 43 33333556889999999999987765
No 389
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=34.23 E-value=49 Score=27.02 Aligned_cols=27 Identities=19% Similarity=0.055 Sum_probs=21.3
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|..++-.
T Consensus 35 GatG~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 35 GITGQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 555566678889999999999988754
No 390
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=34.21 E-value=47 Score=26.30 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=25.2
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||++. ||+=.+=-.++.+|.++||+|+.++-.
T Consensus 3 ~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVT------GGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEE------TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE------CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 566553 555567778899999999999988765
No 391
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=34.15 E-value=26 Score=27.35 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=25.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..|||++ .||+=.+=-.++.+|.++||+|..++.
T Consensus 11 ~~~~vlV------tGatG~iG~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 11 HHMKILI------TGANGQLGREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp -CEEEEE------ESTTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred ccceEEE------ECCCChHHHHHHHHHHhCCCeEEeccC
Confidence 4467765 366667777889999999999988764
No 392
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=34.12 E-value=43 Score=27.39 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=25.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
++++|++ .||+=.+=..++.+|.++||+|+++..
T Consensus 10 ~~~~vlV------TG~tGfIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 10 HGSRVMV------IGGDGYCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp --CEEEE------ETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEE------eCCCcHHHHHHHHHHHhCCCeEEEEEe
Confidence 4566665 377778888899999999999998853
No 393
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=34.12 E-value=53 Score=25.81 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=24.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+|||+|+ + .| ..=-.+|..|++.||+|+++.-..+
T Consensus 18 ~~~kIgiI--G--~G---~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVL--G--TG---TVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEE--C--CS---HHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEE--C--CC---HHHHHHHHHHHHCCCEEEEEeCChh
Confidence 45899998 3 33 2223578899999999999865433
No 394
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=34.10 E-value=40 Score=28.73 Aligned_cols=33 Identities=27% Similarity=0.432 Sum_probs=24.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+++ |.| ..=..+|..|++.||+|+++...
T Consensus 29 ~mkI~VI----GaG---~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAIL----GAG---SWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEE----CCS---HHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEE----Ccc---HHHHHHHHHHHHCCCeEEEEeCC
Confidence 5789986 222 23345889999999999998764
No 395
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=33.67 E-value=68 Score=25.92 Aligned_cols=41 Identities=12% Similarity=0.185 Sum_probs=29.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
...|+++.|++..---..++-.+..++.+.|+++.+.....
T Consensus 61 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~ 101 (349)
T 1jye_A 61 SLLIGVATSSLALHAPSQIVAAILSRADQLGASVVVSMVER 101 (349)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCEEEEEeCCCCcccHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 45799999997654444566666777888999998876653
No 396
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=33.61 E-value=41 Score=27.51 Aligned_cols=34 Identities=32% Similarity=0.346 Sum_probs=25.4
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..+|||+|+=.++ +|+ .+|.+|++.||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~-~G~------sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGS-STV------NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSC-CCS------CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCH-HHH------HHHHHHHHCCCEEEEecC
Confidence 3568999984432 255 489999999999988765
No 397
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=33.38 E-value=76 Score=25.07 Aligned_cols=38 Identities=5% Similarity=-0.128 Sum_probs=25.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+||..|+-.--..=|=--+...++.+|+++|++|..+=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34544443332333566677899999999999998863
No 398
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=33.35 E-value=79 Score=24.30 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=28.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++||+++..+ |=.+-=+......|.+.|++|.+++..
T Consensus 9 ~~~v~ill~~---g~~~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAH---GSEEMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECT---TCCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3589999887 334444556778889999999999875
No 399
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=33.27 E-value=1.5e+02 Score=25.03 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=30.0
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
..++||+++..| |=.|-=+......|.+.|++|.+++..
T Consensus 203 ~~~~ki~ill~d---g~~~~e~~~~~~~l~~ag~~v~~vs~~ 241 (396)
T 3uk7_A 203 GANKRILFLCGD---YMEDYEVKVPFQSLQALGCQVDAVCPE 241 (396)
T ss_dssp CCCCEEEEECCT---TEEHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred hccceEEEEecC---CCcchhHHHHHHHHHHCCCEEEEECCC
Confidence 346789999887 444555667778899999999999765
No 400
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=33.21 E-value=43 Score=25.38 Aligned_cols=37 Identities=5% Similarity=-0.051 Sum_probs=30.7
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+++.|++...--.+++-.+..+..+.|+++.++..
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~ 38 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRST 38 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999987777777887888888889999988763
No 401
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=33.20 E-value=25 Score=26.61 Aligned_cols=22 Identities=14% Similarity=0.246 Sum_probs=19.6
Q ss_pred HHHHHHHHHHCCCeEEEEEeec
Q 046633 27 IVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 27 vvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.++.+.++++||.|.++|.+.
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~ 50 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVRE 50 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCC
Confidence 5789999999999999999874
No 402
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=33.06 E-value=68 Score=24.93 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=23.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
|++++ .||+--+=..+|.+|+++|++|.+...
T Consensus 10 k~~lV-----TGas~gIG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 10 KVALV-----TGASRGIGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp CEEEE-----SSCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEE-----eCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 55555 355555666889999999999987654
No 403
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=32.97 E-value=63 Score=27.68 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=26.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++|+++ |+--.-+++|..|++.|.+|+++....
T Consensus 187 ~~~vvVi-------GgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIV-------GAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEE-------CCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEE-------CCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 4678877 223457789999999999999998653
No 404
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=32.93 E-value=67 Score=28.67 Aligned_cols=39 Identities=26% Similarity=0.281 Sum_probs=30.1
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++.++.-..|.=|---+.+++|.+++++|++|.++....
T Consensus 327 ~~~~~~~~~~g~Gktt~a~~lA~~l~~~g~~vllvD~Dp 365 (589)
T 1ihu_A 327 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDP 365 (589)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CeEEEEecCCCCChhhHHHHHHHHHHHCCCcEEEEeCCC
Confidence 444444555666778899999999999999999987653
No 405
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=32.92 E-value=90 Score=25.30 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=29.3
Q ss_pred CceEEEEeCCCCC--C------ch-HHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGI--G------GA-ERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgi--G------GA-ERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|+||+++..+-+. + |- |-=++.-...|.+.|++|++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999988421 2 33 333556678899999999999865
No 406
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=32.88 E-value=36 Score=24.48 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
++||+++ |. -++-..+|..|.+.|++|+++...
T Consensus 3 ~~~vlI~----G~---G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC----GH---SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEE----CC---SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEE----CC---CHHHHHHHHHHHHCCCCEEEEECC
Confidence 3467765 22 367778899999999999999754
No 407
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=32.82 E-value=53 Score=25.40 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=30.1
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+|+++.|++...--..++-.+..++.+.|+++.+..+..+
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~ 42 (283)
T 2ioy_A 2 KTIGLVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQND 42 (283)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHhcCcEEEEecCCCC
Confidence 47999999976554556666667778889999988765433
No 408
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=32.76 E-value=35 Score=26.84 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=22.8
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|+|++. ||+=.+=-.++.+|.++||+|..++-.
T Consensus 4 ~~~ilVt------GatG~iG~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV------GGTGYIGKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE------STTSTTHHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE------cCCcHHHHHHHHHHHhCCCcEEEEECC
Confidence 4577664 333334445778888999999887754
No 409
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=32.75 E-value=1.7e+02 Score=22.53 Aligned_cols=27 Identities=19% Similarity=0.175 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 14 Gas~gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 14 GASSGLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp STTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 555566678899999999999887544
No 410
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=32.72 E-value=82 Score=21.63 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=24.9
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|..|+++-.++..+.+.|++|.++...
T Consensus 10 tGnT~~~a~~i~~~l~~~g~~v~~~~~~ 37 (137)
T 2fz5_A 10 TGNTEAMANEIEAAVKAAGADVESVRFE 37 (137)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CChHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 6999999999999999999999988643
No 411
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=32.65 E-value=53 Score=25.03 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=23.3
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
||+++ |.|.|-- -.++++|.+.|.+|+++.
T Consensus 4 ~I~ii--D~g~~n~----~si~~al~~~G~~~~v~~ 33 (211)
T 4gud_A 4 NVVII--DTGCANI----SSVKFAIERLGYAVTISR 33 (211)
T ss_dssp CEEEE--CCCCTTH----HHHHHHHHHTTCCEEEEC
T ss_pred EEEEE--ECCCChH----HHHHHHHHHCCCEEEEEC
Confidence 68887 7777743 467789999999999863
No 412
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=32.60 E-value=65 Score=27.52 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=25.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+++++ .|| -.-+++|..|++.|.+|+++...
T Consensus 167 ~~~vvVi-----GgG--~~g~e~A~~l~~~g~~Vtlv~~~ 199 (450)
T 1ges_A 167 PERVAVV-----GAG--YIGVELGGVINGLGAKTHLFEMF 199 (450)
T ss_dssp CSEEEEE-----CCS--HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCeEEEE-----CCC--HHHHHHHHHHHhcCCEEEEEEeC
Confidence 4678877 233 36778999999999999999765
No 413
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=32.59 E-value=79 Score=26.38 Aligned_cols=37 Identities=14% Similarity=0.070 Sum_probs=27.0
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||.-+- +=|+=|=--..+|||.+|+++|++|-++=.-
T Consensus 49 KVIAIa-GKGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 49 KVFAVY-GKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp EEEEEE-CSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred eEEEEE-CCCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 443333 4333367788999999999999999988543
No 414
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=32.43 E-value=54 Score=25.40 Aligned_cols=34 Identities=12% Similarity=0.045 Sum_probs=23.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+|||++. |.| .+=-.++.+|.++||+|+.++-..
T Consensus 5 ~~~ilVt----GaG---~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSF----GHG---YTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEE----TCC---HHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEE----CCc---HHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3677665 223 455567889999999999887543
No 415
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=32.42 E-value=39 Score=25.97 Aligned_cols=39 Identities=10% Similarity=-0.016 Sum_probs=26.6
Q ss_pred CceEEEEeCCCC--CCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLG--IGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLg--iGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..+|+++.|+++ .---..++--+..++.+.|+++.++..
T Consensus 5 ~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 45 (289)
T 3brs_A 5 QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEIKLEFMAP 45 (289)
T ss_dssp CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTCEEEECCC
T ss_pred CcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 357999999876 333344555556667778998887654
No 416
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=32.40 E-value=51 Score=26.62 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=24.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~ 47 (176)
.|+|++. ||+=.+=-.++.+|.++| ++|..+...
T Consensus 46 ~~~vlVt------GatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 46 GRMIIVT------GGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp --CEEEE------TTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCEEEEE------CCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 3566553 555567778899999999 999988654
No 417
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=32.39 E-value=35 Score=24.42 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=20.8
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHH--CCCeEEEEE
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVS--HGHNVHVFT 45 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~--~Gh~V~l~T 45 (176)
-|+++|- .| |.......++..|++ +|+.|....
T Consensus 16 ~vv~~HG-~~--~~~~~~~~~~~~l~~~~~g~~v~~~d 50 (218)
T 1auo_A 16 CVIWLHG-LG--ADRYDFMPVAEALQESLLTTRFVLPQ 50 (218)
T ss_dssp EEEEECC-TT--CCTTTTHHHHHHHHTTCTTEEEEECC
T ss_pred EEEEEec-CC--CChhhHHHHHHHHhhcCCceEEEeCC
Confidence 4555554 33 323334678899998 898887753
No 418
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=32.36 E-value=58 Score=25.37 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=32.9
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+||+++--++.-|.--+.+.+.+..+.+.|.+|.++...
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~ 41 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIG 41 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGG
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecc
Confidence 579999988888888788888888888899999988654
No 419
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=32.36 E-value=65 Score=27.75 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=26.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+++++++ .|| -.-+++|..|++.|.+|+++....
T Consensus 184 ~~~~vvVi-----GgG--~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 184 QPKKVVVV-----GAG--YIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp CCSEEEEE-----CSS--HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEE-----CCC--HHHHHHHHHHHHcCCceEEEEeCC
Confidence 34678877 233 467899999999999999998653
No 420
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=32.35 E-value=85 Score=26.59 Aligned_cols=38 Identities=26% Similarity=0.340 Sum_probs=25.8
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.+++++|+++ .||.== ..+|..|+++|++|+++-....
T Consensus 8 ~~~~~~v~II-----GaG~aG--l~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 8 VKGSHSVVVL-----GGGPAG--LCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp CCSCCEEEEE-----CCSHHH--HHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCCCEEEE-----CCCHHH--HHHHHHHHHCCCCEEEEeccCC
Confidence 3445788876 233322 3578899999999999976543
No 421
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.30 E-value=60 Score=25.59 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=24.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|++++- ||+--+=-.+|.+|+++|++|.++...
T Consensus 21 ~k~~lVT-----Gas~gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVT-----GGSRGLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEE-----TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE-----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3555553 555566678899999999999887543
No 422
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=32.28 E-value=53 Score=24.71 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=27.0
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|+++|-.-..+|.......++..|+++|+.|..+-..
T Consensus 45 ~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 82 (276)
T 3hxk_A 45 AIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYT 82 (276)
T ss_dssp EEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECC
T ss_pred EEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCc
Confidence 35566653224566666778999999999999887654
No 423
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=31.96 E-value=63 Score=25.69 Aligned_cols=26 Identities=27% Similarity=0.560 Sum_probs=20.7
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+-.+=-.++.+|.++||+|.++..
T Consensus 7 GatG~iG~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 7 GGSGYIGSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 55556677888999999999998753
No 424
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=31.93 E-value=34 Score=26.77 Aligned_cols=21 Identities=24% Similarity=0.162 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHCCCeEEEEEe
Q 046633 26 LIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 26 lvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+=-.+|.+|+++|++|.+...
T Consensus 22 IG~~ia~~l~~~G~~V~~~~r 42 (261)
T 2wyu_A 22 LGFAIAAKLKEAGAEVALSYQ 42 (261)
T ss_dssp HHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEcC
Confidence 334678899999999988754
No 425
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.61 E-value=1.2e+02 Score=22.74 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=21.6
Q ss_pred CchHHHHHHHHHHHHHCC--CeEEEEEeec
Q 046633 21 GGAERLIVDAAVELVSHG--HNVHVFTAHH 48 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~G--h~V~l~T~~~ 48 (176)
||+--+=..+|.+|.++| ++|.++....
T Consensus 10 GasggiG~~la~~l~~~g~~~~V~~~~r~~ 39 (250)
T 1yo6_A 10 GANRGIGLGLVQQLVKDKNIRHIIATARDV 39 (250)
T ss_dssp SCSSHHHHHHHHHHHTCTTCCEEEEEESSG
T ss_pred cCCchHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 555566678899999999 9998876543
No 426
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=31.60 E-value=33 Score=26.92 Aligned_cols=34 Identities=9% Similarity=0.124 Sum_probs=21.8
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||++. ||+=.+=-.++.+|.++||+|..++-.
T Consensus 2 ~~~vlVt------GatG~iG~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILIL------GPTGAIGRHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEE------STTSTTHHHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEE------CCCchHHHHHHHHHHhCCCcEEEEECC
Confidence 4566654 222233445678888899999887654
No 427
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=31.57 E-value=40 Score=23.66 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=24.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+++|+++ |.| ++-..+|..|.++|++|+++...
T Consensus 6 ~~~v~I~----G~G---~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVI----GSE---AAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEE----CCS---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEE----CCC---HHHHHHHHHHHHCCCeEEEEECC
Confidence 4567765 232 47778999999999999998754
No 428
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=31.56 E-value=88 Score=24.59 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=21.0
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=..+|.+|+++|++|.++...
T Consensus 33 GasggiG~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 33 GGGTGLGKGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 555566678899999999999887543
No 429
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=31.56 E-value=38 Score=28.21 Aligned_cols=33 Identities=15% Similarity=0.095 Sum_probs=23.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+++||+++ |.|+. .+.++.++++.|++|.+++.
T Consensus 6 ~~~~ilI~----g~g~~---~~~~~~a~~~~G~~~v~v~~ 38 (403)
T 4dim_A 6 DNKRLLIL----GAGRG---QLGLYKAAKELGIHTIAGTM 38 (403)
T ss_dssp CCCEEEEE----CCCGG---GHHHHHHHHHHTCEEEEEEC
T ss_pred CCCEEEEE----CCcHh---HHHHHHHHHHCCCEEEEEcC
Confidence 45688875 34432 35688889999999999964
No 430
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=31.37 E-value=97 Score=20.37 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=34.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCC-ceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNG-TFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G-~l~V~v~Gd~lPr 73 (176)
+++||+++-.+ +...-.+...|.+.|++|..+++ ...+....... ..++...+--+|.
T Consensus 4 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~~---~~~a~~~l~~~~~~dlvi~d~~l~~ 62 (132)
T 2rdm_A 4 EAVTILLADDE------AILLLDFESTLTDAGFLVTAVSS---GAKAIEMLKSGAAIDGVVTDIRFCQ 62 (132)
T ss_dssp SSCEEEEECSS------HHHHHHHHHHHHHTTCEEEEESS---HHHHHHHHHTTCCCCEEEEESCCSS
T ss_pred CCceEEEEcCc------HHHHHHHHHHHHHcCCEEEEECC---HHHHHHHHHcCCCCCEEEEeeeCCC
Confidence 46789999888 44555677788889998875432 22222222222 3555555444553
No 431
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.30 E-value=93 Score=23.66 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=21.1
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.||+--+=..+|.+|+++|++|.++...
T Consensus 20 TGas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 20 TGAARGIGAAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eCCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 3555566667899999999999887543
No 432
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=31.28 E-value=95 Score=24.28 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=28.3
Q ss_pred CceEEEEeCCCC--CCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLG--IGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLg--iGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
|+||+++..+-+ -|-.+-=++.....|.+.|++|.+++...
T Consensus 6 m~kv~ill~~~~~~~g~~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 578999988211 13333445556778889999999998764
No 433
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=31.23 E-value=76 Score=24.57 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=20.6
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.+....
T Consensus 21 Gas~gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 21 ASTDGIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455556667899999999999887543
No 434
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=31.22 E-value=71 Score=27.28 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=26.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++|+++ | || -.-+++|..|++.|.+|+++....
T Consensus 178 ~~~vvVi----G-gG--~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 178 PEKMVVI----G-AG--VIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp CSEEEEE----C-CS--HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEE----C-CC--HHHHHHHHHHHHcCCEEEEEeccC
Confidence 4678876 2 33 467889999999999999997653
No 435
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=31.22 E-value=86 Score=23.78 Aligned_cols=27 Identities=26% Similarity=0.402 Sum_probs=21.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.++...
T Consensus 13 GasggiG~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 13 GGTLGIGLAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 555567778999999999999887643
No 436
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=31.17 E-value=44 Score=26.52 Aligned_cols=22 Identities=23% Similarity=0.184 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHCCCeEEEEEee
Q 046633 26 LIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 26 lvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+=-.++.+|.++||+|..++-.
T Consensus 23 iG~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 23 IGNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp THHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHHHHCCCcEEEEECC
Confidence 3446778889999999887754
No 437
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=31.06 E-value=51 Score=28.60 Aligned_cols=33 Identities=24% Similarity=0.267 Sum_probs=25.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+.+||.|+ |+||+=. .+|..|+++||+|+.+-.
T Consensus 8 ~~k~v~vi----G~G~sG~---s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVL----GLARSGE---AAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEE----CCTTTHH---HHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEE----eeCHHHH---HHHHHHHhCCCEEEEEeC
Confidence 35688874 7777655 359999999999998755
No 438
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=31.01 E-value=68 Score=25.11 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=24.4
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+|+++| .||+--+=-.+|.+|+++|++|.+...
T Consensus 26 ~k~vlI-----TGas~gIG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 26 TPVVLV-----TGGSRGIGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp SCEEEE-----TTTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEE-----ECCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 455555 456666777899999999999977643
No 439
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=30.92 E-value=63 Score=27.96 Aligned_cols=58 Identities=24% Similarity=0.223 Sum_probs=35.5
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEeecCC-Cccccccc-CCceeEEEeCCccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAHHDK-RRCFEETV-NGTFPVTVYGDFLP 72 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~~d~-~hcF~Et~-~G~l~V~v~Gd~lP 72 (176)
++++|++| +||.== +.+|..|++.| ++|+|+-.+... +++..... +| ..+..-+.|+.
T Consensus 7 ~~~~VvII-----GaG~aG--L~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G-~~~D~G~~~~~ 67 (516)
T 1rsg_A 7 AKKKVIII-----GAGIAG--LKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQG-RKYDIGASWHH 67 (516)
T ss_dssp EEEEEEEE-----CCBHHH--HHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGG-CEEESSCCEEC
T ss_pred CCCcEEEE-----CCCHHH--HHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCC-cEEecCCeEEe
Confidence 34567766 333322 36789999999 999999877543 44443332 34 45555555654
No 440
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=30.91 E-value=51 Score=24.97 Aligned_cols=31 Identities=16% Similarity=0.321 Sum_probs=22.3
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCC-----CeEEEEE
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHG-----HNVHVFT 45 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-----h~V~l~T 45 (176)
|||+++ |.|.|.-..++ ++|.+.| .+|.++.
T Consensus 1 m~I~ii--d~~~g~~~s~~----~~l~~~G~~~~~~~~~~~~ 36 (201)
T 1gpw_B 1 MRIGII--SVGPGNIMNLY----RGVKRASENFEDVSIELVE 36 (201)
T ss_dssp CEEEEE--CCSSSCCHHHH----HHHHHHSTTBSSCEEEEEC
T ss_pred CEEEEE--ecCCchHHHHH----HHHHHcCCCCCceEEEEEC
Confidence 689988 57777764433 5677779 8888765
No 441
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=30.80 E-value=1.1e+02 Score=20.53 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=25.0
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
.+++||+++-.| +...-.+...|.+.|++|..++
T Consensus 16 ~~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~ 49 (137)
T 2pln_A 16 RGSMRVLLIEKN------SVLGGEIEKGLNVKGFMADVTE 49 (137)
T ss_dssp TTCSEEEEECSC------HHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCeEEEEeCC------HHHHHHHHHHHHHcCcEEEEeC
Confidence 455799999887 4555567778888999887443
No 442
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=30.79 E-value=59 Score=26.94 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.|+||.|+ .||.=|. .+|..|.+.||+|+++--.
T Consensus 2 ~M~kIgfI--GlG~MG~-----~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 2 HMKQIAFI--GLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp -CCEEEEE--CCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CcCEEEEe--eehHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 35689998 4545333 5789999999999988543
No 443
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=30.77 E-value=85 Score=24.76 Aligned_cols=27 Identities=30% Similarity=0.372 Sum_probs=20.9
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=..+|.+|+++|++|.++...
T Consensus 25 GasggIG~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 25 GGATGIGKAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455556678899999999999887643
No 444
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=30.77 E-value=62 Score=26.09 Aligned_cols=27 Identities=22% Similarity=0.086 Sum_probs=20.8
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+=.+=-.++.+|.++||+|+++...
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (372)
T 1db3_A 8 GVTGQDGSYLAEFLLEKGYEVHGIKRR 34 (372)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 555567778889999999999887644
No 445
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=30.75 E-value=78 Score=26.12 Aligned_cols=47 Identities=21% Similarity=0.400 Sum_probs=29.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEeecC-CCcccccccCC
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTAHHD-KRRCFEETVNG 60 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~~~d-~~hcF~Et~~G 60 (176)
++++|+++ .||.-= ..+|..|+++| ++|+++-.... .+++-....+|
T Consensus 5 ~~~~v~II-----GaG~aG--l~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 5 KDSRIAII-----GAGPAG--LAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp TTCCEEEE-----CCSHHH--HHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCCEEEE-----CcCHHH--HHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 45678876 333332 36788899999 99999986543 34443333344
No 446
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=30.69 E-value=55 Score=27.71 Aligned_cols=40 Identities=8% Similarity=0.072 Sum_probs=31.9
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHH--HCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELV--SHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~--~~Gh~V~l~T~~~ 48 (176)
.++|+|+-. -|.=|---+.+++|.+|+ ++|++|.++....
T Consensus 17 ~~~i~v~sg-KGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 17 THKWIFVGG-KGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SCCEEEEEE-STTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeC-CCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 345666654 566688889999999999 9999999998764
No 447
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=30.69 E-value=87 Score=25.64 Aligned_cols=36 Identities=28% Similarity=0.424 Sum_probs=22.9
Q ss_pred CCceEEEE--eCC---CCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAII--HPD---LGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~--hpd---LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+++||++| ||| ||.|| +...++++|++|++++....
T Consensus 6 ~~~rvLvv~aHPDDe~lg~GG-------tia~~~~~G~~V~vv~~T~G 46 (273)
T 3dff_A 6 GATRLLAISPHLDDAVLSFGA-------GLAQAAQDGANVLVYTVFAG 46 (273)
T ss_dssp --CEEEEEESSTTHHHHHHHH-------HHHHHHHTTCEEEEEETTCC
T ss_pred CCCCEEEEEeCCChHHHhHHH-------HHHHHHHCCCcEEEEEEeCC
Confidence 35677777 666 23343 23455678999999998753
No 448
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=30.56 E-value=63 Score=25.67 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=26.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHC-CCeEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSH-GHNVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~-Gh~V~l~T~~~d 49 (176)
..+|+++.|+ ..-=-..++--+..++.+. |+++.+.....+
T Consensus 6 ~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~~~ 47 (325)
T 2x7x_A 6 HFRIGVAQCS-DDSWRHKMNDEILREAMFYNGVSVEIRSAGDD 47 (325)
T ss_dssp CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSCEEEEEECTTC
T ss_pred CeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC
Confidence 5689999998 2222233444455566677 999988765543
No 449
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=30.52 E-value=1.2e+02 Score=20.27 Aligned_cols=57 Identities=7% Similarity=0.000 Sum_probs=36.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHH-CCCeEEEEEeecCCCcccccccC-CceeEEEeCCccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVS-HGHNVHVFTAHHDKRRCFEETVN-GTFPVTVYGDFLP 72 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~-~Gh~V~l~T~~~d~~hcF~Et~~-G~l~V~v~Gd~lP 72 (176)
+++||+++-.| +...-.+...|.+ .|++|..+++- ..+.+...+ ...++....--+|
T Consensus 3 ~~~~ilivdd~------~~~~~~l~~~L~~~~~~~v~~~~~~---~~a~~~l~~~~~~dlvi~D~~l~ 61 (140)
T 3lua_A 3 LDGTVLLIDYF------EYEREKTKIIFDNIGEYDFIEVENL---KKFYSIFKDLDSITLIIMDIAFP 61 (140)
T ss_dssp CCCEEEEECSC------HHHHHHHHHHHHHHCCCEEEEECSH---HHHHTTTTTCCCCSEEEECSCSS
T ss_pred CCCeEEEEeCC------HHHHHHHHHHHHhccCccEEEECCH---HHHHHHHhcCCCCcEEEEeCCCC
Confidence 46789999887 4555567777888 89998844432 333333333 4466777755566
No 450
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=30.40 E-value=61 Score=24.95 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=22.9
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.+|||+++ |.| ..=..+|..|++.||+|+++..
T Consensus 18 ~~~~I~ii----G~G---~mG~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIF----GKG---NMGQAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEE----CCS---HHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEE----CCC---HHHHHHHHHHHHCCCEEEEEcC
Confidence 45789886 333 3445678899999999998853
No 451
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=30.39 E-value=74 Score=27.35 Aligned_cols=34 Identities=35% Similarity=0.400 Sum_probs=25.7
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.+|+++ | || -.-+++|..|++.|.+|+++....
T Consensus 166 ~~~vvVv----G-gG--~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 166 PKRVAII----G-AG--YIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp CSEEEEE----C-CS--HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEE----C-CC--HHHHHHHHHHHhcCCEEEEEEcCC
Confidence 4578876 2 33 367789999999999999997653
No 452
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=30.31 E-value=44 Score=26.39 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=24.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+|||++. ||+=.+=-.++.+|.++||+|.++..
T Consensus 3 ~~~ilVt------GatG~iG~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIA------GHRGMVGSAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp CEEEEEE------TTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred CCEEEEE------CCCcHHHHHHHHHHHhCCCeEEEEec
Confidence 4677653 56666777888999999999887653
No 453
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=30.13 E-value=52 Score=25.49 Aligned_cols=39 Identities=10% Similarity=-0.095 Sum_probs=30.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+.+|+++.|++..-=-..++-.+-.+.+++|+++.++.+
T Consensus 2 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 40 (306)
T 8abp_A 2 NLKLGFLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAV 40 (306)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEEC
T ss_pred CeEEEEEeCCCCchHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 468999999976655566666677777888999987765
No 454
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=30.12 E-value=35 Score=28.19 Aligned_cols=35 Identities=14% Similarity=0.032 Sum_probs=24.0
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
-|+++|- .||.-..--.++..|+++|+.|..+-..
T Consensus 260 ~vv~~HG---~~~~~~~~~~~~~~l~~~G~~v~~~D~~ 294 (555)
T 3i28_A 260 AVCLCHG---FPESWYSWRYQIPALAQAGYRVLAMDMK 294 (555)
T ss_dssp EEEEECC---TTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred EEEEEeC---CCCchhHHHHHHHHHHhCCCEEEEecCC
Confidence 4667763 3333334457788999999999888653
No 455
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=30.00 E-value=88 Score=21.56 Aligned_cols=33 Identities=9% Similarity=0.142 Sum_probs=24.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFT 45 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T 45 (176)
+++||+++-.| +...-.+...|.+.|++|..+.
T Consensus 13 ~~~~ILivdd~------~~~~~~l~~~L~~~g~~v~~~~ 45 (153)
T 3hv2_A 13 RRPEILLVDSQ------EVILQRLQQLLSPLPYTLHFAR 45 (153)
T ss_dssp SCCEEEEECSC------HHHHHHHHHHHTTSSCEEEEES
T ss_pred CCceEEEECCC------HHHHHHHHHHhcccCcEEEEEC
Confidence 45789999888 4555567788888899887544
No 456
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=30.00 E-value=77 Score=27.00 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+++++++ | || -.-+++|..|++.|.+|+++....
T Consensus 170 ~~~~vvVi----G-gG--~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 170 LPKSIIIA----G-AG--AIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp CCSEEEEE----C-CS--HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCeEEEE----C-Cc--HHHHHHHHHHHHcCCeEEEEEcCC
Confidence 34678776 2 33 467789999999999999998653
No 457
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=29.84 E-value=78 Score=27.00 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=26.1
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+++|+++ | || -.-+++|..|++.|.+|+++....
T Consensus 183 ~~~vvVi----G-gG--~~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 183 PKRLTII----G-GG--IIGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp CSEEEEE----C-CS--HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEE----C-CC--HHHHHHHHHHHHcCCEEEEEEeCC
Confidence 4678876 2 33 357789999999999999997653
No 458
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=29.75 E-value=60 Score=25.90 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=24.4
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHC--CCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSH--GHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~--Gh~V~l~T~~ 47 (176)
||+|++. ||+=.+=-.++.+|.++ ||+|..+.-.
T Consensus 4 m~~vlVT------GatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 4 FKNIIVT------GGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp CSEEEEE------TTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CcEEEEe------CCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 4566553 55556667788889888 8999988653
No 459
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=29.70 E-value=1.8e+02 Score=24.49 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=23.9
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
-|--.++..+|...++.|..|.+++..+.
T Consensus 72 sGKTtLal~la~~~~~~g~~vlyi~~E~~ 100 (349)
T 2zr9_A 72 SGKTTVALHAVANAQAAGGIAAFIDAEHA 100 (349)
T ss_dssp SSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 35677888999999999999999988753
No 460
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=35.76 E-value=11 Score=29.40 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=27.6
Q ss_pred CCCceEEEEeCCCCCCch-HHHHHHHHHHHHHCCCeEEEE-Eee
Q 046633 6 SSKLNVAIIHPDLGIGGA-ERLIVDAAVELVSHGHNVHVF-TAH 47 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGA-ERlvvdlA~~l~~~Gh~V~l~-T~~ 47 (176)
+++|||+++.-+...+|- ++++-.++..+.+ |++|.++ -..
T Consensus 4 ~~~mkIliI~gS~r~~s~t~~la~~~~~~~~~-g~~v~~i~dl~ 46 (199)
T 3s2y_A 4 TSPLHFVTLLGSLRKASFNAAVARALPEIAPE-GIAITPLGSIG 46 (199)
Confidence 357899999888765554 4454445555555 9999888 543
No 461
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=29.55 E-value=91 Score=21.13 Aligned_cols=58 Identities=12% Similarity=-0.007 Sum_probs=34.8
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccC-CceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVN-GTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~-G~l~V~v~Gd~lPr 73 (176)
+++||+++-.| +...-.+...|.+.|++|..+++. ..+.+...+ ...++....-.+|.
T Consensus 4 ~~~~ilivdd~------~~~~~~l~~~L~~~g~~v~~~~~~---~~a~~~l~~~~~~dlvi~D~~l~~ 62 (140)
T 3h5i_A 4 KDKKILIVEDS------KFQAKTIANILNKYGYTVEIALTG---EAAVEKVSGGWYPDLILMDIELGE 62 (140)
T ss_dssp --CEEEEECSC------HHHHHHHHHHHHHTTCEEEEESSH---HHHHHHHHTTCCCSEEEEESSCSS
T ss_pred CCcEEEEEeCC------HHHHHHHHHHHHHcCCEEEEecCh---HHHHHHHhcCCCCCEEEEeccCCC
Confidence 35789999888 455556778888899998754432 223332222 23556666555664
No 462
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=29.35 E-value=95 Score=23.68 Aligned_cols=28 Identities=18% Similarity=0.130 Sum_probs=22.0
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.||+--+=-.+|.+|+++|++|.+....
T Consensus 20 TGas~gIG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 20 TGASSGIGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 3566667778899999999999887643
No 463
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=29.32 E-value=37 Score=26.37 Aligned_cols=47 Identities=28% Similarity=0.379 Sum_probs=22.6
Q ss_pred CccccCCCceEEEEeCCCCCCchHHH----HHHHHHHHH-HCCCeEEEEEeec
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERL----IVDAAVELV-SHGHNVHVFTAHH 48 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERl----vvdlA~~l~-~~Gh~V~l~T~~~ 48 (176)
|+..+++++||+|+..+ |.=-.|-. +...|+.+. +.+++|.+++...
T Consensus 1 m~~~~~~~~~v~ill~~-g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~ 52 (209)
T 3er6_A 1 MSLTNKKNLRVVALAPT-GRYFASIISSLEILETAAEFAEFQGFMTHVVTPNN 52 (209)
T ss_dssp ------CCEEEEEECCC-TTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTS
T ss_pred CCCCCCCCeEEEEEEeC-CCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCC
Confidence 67777788999999887 22212211 112233332 2358998887653
No 464
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=29.27 E-value=40 Score=25.71 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=22.9
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
..|+++| +++ ++++ .--..+..|+++||+|..+-.
T Consensus 11 ~~vvllH-G~~-~~~~-~w~~~~~~L~~~g~~via~Dl 45 (264)
T 2wfl_A 11 KHFVLVH-GGC-LGAW-IWYKLKPLLESAGHKVTAVDL 45 (264)
T ss_dssp CEEEEEC-CTT-CCGG-GGTTHHHHHHHTTCEEEEECC
T ss_pred CeEEEEC-CCc-cccc-hHHHHHHHHHhCCCEEEEeec
Confidence 3577777 333 2333 234577889889999988865
No 465
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=29.18 E-value=1.1e+02 Score=24.20 Aligned_cols=37 Identities=8% Similarity=0.141 Sum_probs=24.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCC--eEEEEEeecC
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGH--NVHVFTAHHD 49 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh--~V~l~T~~~d 49 (176)
||||+|+..+- | .....+..++.+.++ +|..+.+..+
T Consensus 1 m~rI~vl~SG~--g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~ 39 (216)
T 2ywr_A 1 MLKIGVLVSGR--G---SNLQAIIDAIESGKVNASIELVISDNP 39 (216)
T ss_dssp CEEEEEEECSC--C---HHHHHHHHHHHTTSSCEEEEEEEESCT
T ss_pred CCEEEEEEeCC--c---HHHHHHHHHHHhCCCCCeEEEEEeCCC
Confidence 46899986542 2 356677888888888 7765555443
No 466
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=29.16 E-value=59 Score=23.86 Aligned_cols=34 Identities=12% Similarity=-0.012 Sum_probs=25.0
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCC--eEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGH--NVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh--~V~l~T~~ 47 (176)
+|||++. ||+-.+=-.++.+|.++|+ +|..++-.
T Consensus 5 ~~~vlVt------GatG~iG~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLA------GATGLTGEHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEE------CTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEE------CCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4567653 5556677788899999999 88877644
No 467
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=28.97 E-value=61 Score=27.68 Aligned_cols=33 Identities=27% Similarity=0.513 Sum_probs=24.5
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||+|+ ++| ..=..+|..|++.||+|.++...
T Consensus 22 ~mkIgiI--GlG-----~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMI--GLG-----RMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CCEEEEE--CCS-----HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--Cch-----HHHHHHHHHHHhCCCEEEEEeCC
Confidence 3789987 333 33347899999999999998654
No 468
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=28.92 E-value=63 Score=27.67 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=26.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+++|+++ | || -.-+++|..|++.|.+|+++....
T Consensus 170 ~~~~vvVi----G-gG--~~g~e~A~~l~~~g~~Vtlv~~~~ 204 (458)
T 1lvl_A 170 LPQHLVVV----G-GG--YIGLELGIAYRKLGAQVSVVEARE 204 (458)
T ss_dssp CCSEEEEE----C-CS--HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEE----C-cC--HHHHHHHHHHHHCCCeEEEEEcCC
Confidence 35678886 2 33 356788999999999999998653
No 469
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.86 E-value=95 Score=21.37 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=34.6
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
++++|+++-.| +...-.+...|.+.|++|..+++. ..+.........++.+.+-.+|.
T Consensus 2 ~~~~ILivdd~------~~~~~~l~~~L~~~g~~v~~~~~~---~~a~~~l~~~~~dliild~~l~~ 59 (155)
T 1qkk_A 2 AAPSVFLIDDD------RDLRKAMQQTLELAGFTVSSFASA---TEALAGLSADFAGIVISDIRMPG 59 (155)
T ss_dssp --CEEEEECSC------HHHHHHHHHHHHHTTCEEEEESCH---HHHHHTCCTTCCSEEEEESCCSS
T ss_pred CCCEEEEEeCC------HHHHHHHHHHHHHcCcEEEEECCH---HHHHHHHHhCCCCEEEEeCCCCC
Confidence 45789999888 445556777888899998754432 22233333334566666544554
No 470
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=28.76 E-value=76 Score=25.26 Aligned_cols=26 Identities=27% Similarity=0.305 Sum_probs=20.8
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+=.+=-.++.+|.++||+|..+..
T Consensus 9 GatG~iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 9 GGAGYIGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp TTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEec
Confidence 55556677888999999999998864
No 471
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=28.73 E-value=78 Score=27.49 Aligned_cols=35 Identities=23% Similarity=0.182 Sum_probs=27.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
.+++|+++ .|| -.-+++|..|++.|.+|+++....
T Consensus 173 ~~k~vvVi-----GgG--~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 173 LPKSVAVF-----GPG--VIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp CCSEEEEE-----SSC--HHHHHHHHHHHHTTCEEEEECCTT
T ss_pred cCCeEEEE-----CCC--HHHHHHHHHHHHcCCeEEEEEECC
Confidence 35678887 233 457889999999999999998654
No 472
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=28.59 E-value=93 Score=27.02 Aligned_cols=46 Identities=20% Similarity=0.235 Sum_probs=28.7
Q ss_pred CccccC-CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 1 MEQRRS-SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 1 m~~~~~-~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
|+.+.. +++||+|+..+ |=.+-=+......|.+.|++|.+++....
T Consensus 2 m~~~~~~~mkkV~ILl~d---gf~~~El~~p~dvL~~Ag~~v~vvS~~~g 48 (365)
T 3fse_A 2 MTNHNNSGKKKVAILIEQ---AVEDTEFIIPCNGLKQAGFEVVVLGSRMN 48 (365)
T ss_dssp ---------CEEEEECCT---TBCHHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCCCCCCceEEEEEECC---CCcHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 543433 45789999887 33444455677888899999999987644
No 473
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=28.50 E-value=62 Score=27.94 Aligned_cols=32 Identities=31% Similarity=0.395 Sum_probs=23.1
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++ ++|.=|. -+|..|++.||+|+++...
T Consensus 1 mkI~VI--G~G~vG~-----~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIF--GLGYVGA-----VCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEE--CCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEE--CCCHHHH-----HHHHHHHHCCCEEEEEECC
Confidence 588887 4444332 5788889999999988643
No 474
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.27 E-value=37 Score=26.62 Aligned_cols=34 Identities=15% Similarity=0.254 Sum_probs=22.3
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+|||++. ||+=.+=-.++++|.++||+|..++-.
T Consensus 4 ~~~ilVt------GatG~iG~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLI------GATGYIGRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEE------STTSTTHHHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEE------cCCcHHHHHHHHHHHhCCCCEEEEECC
Confidence 4566654 222233446778889999999887654
No 475
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=28.25 E-value=48 Score=28.44 Aligned_cols=57 Identities=21% Similarity=0.201 Sum_probs=37.5
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCccc-ccccCCceeEEEeCC
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCF-EETVNGTFPVTVYGD 69 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF-~Et~~G~l~V~v~Gd 69 (176)
++-.||++.+..-+.|| + +++.++.+.|.+. ++|.+.+..+ | .+..+..+.|...|.
T Consensus 193 ~~vgkIaV~~GgGtsG~-~----~~i~~a~~~GvDt-~ITGe~~~~~-~~~~A~E~ginVI~AGH 250 (278)
T 3rxy_A 193 QPLGKIAVVHGAGTNGG-Y----AVARAYFDHGVRT-VLYIHIAPEE-AERLRREGGGNLIVTGH 250 (278)
T ss_dssp SBCCSEEECCSSSSCCH-H----HHHHHHHHTTCCE-EEESCCCHHH-HHHHHHHCSSEEEECCH
T ss_pred CcCCEEEEEcCCCCCCc-H----HHHHHHHHcCCCE-EEEecCchHH-HHHHHHHcCCeEEEecc
Confidence 34467888776644444 4 5667777889886 5577755554 5 444554499999996
No 476
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=27.98 E-value=64 Score=25.15 Aligned_cols=40 Identities=8% Similarity=-0.069 Sum_probs=31.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
+.+|+++.|++...--..++-.+..+..+.|+++.+....
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 42 (297)
T 3rot_A 3 RDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAPP 42 (297)
T ss_dssp CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECCS
T ss_pred eEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECCC
Confidence 4689999999866666677777777888899999987754
No 477
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=27.96 E-value=1.1e+02 Score=24.81 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=26.4
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHH--CCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVS--HGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~--~Gh~V~l~T~~ 47 (176)
++|+|++. ||+=.+=-.++.+|.+ +||+|.++.-.
T Consensus 9 ~~~~vlVT------GatG~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 9 ENQTILIT------GGAGFVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TTCEEEEE------TTTSHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCCEEEEE------CCCCHHHHHHHHHHHhhCCCCeEEEEECC
Confidence 45676653 6666677788999999 99999988653
No 478
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=27.95 E-value=65 Score=26.41 Aligned_cols=31 Identities=29% Similarity=0.388 Sum_probs=22.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEE
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVF 44 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~ 44 (176)
.+|||+++ |.|. +=.-+|..|++.||+|+++
T Consensus 18 ~~~kI~Ii----GaGa---~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIM----GAGA---VGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEE----SCSH---HHHHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEE----CcCH---HHHHHHHHHHHCCCeEEEE
Confidence 45899987 3332 2345788999999999999
No 479
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=27.88 E-value=86 Score=23.79 Aligned_cols=27 Identities=15% Similarity=0.239 Sum_probs=21.0
Q ss_pred CchHHHHHHHHHHHHH-CCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVS-HGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~-~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|++ +|++|.++.-.
T Consensus 11 GasggIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 11 GGNKGIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp SCSSHHHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCCcHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 5555666788999999 99999887643
No 480
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=27.82 E-value=65 Score=24.52 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=29.4
Q ss_pred eEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 10 NVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 10 kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
.|+++.|++...--.+++-.+..++.++|+++.+.....+
T Consensus 1 ~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~ 40 (276)
T 2h0a_A 1 TVSVLLPFVATEFYRRLVEGIEGVLLEQRYDLALFPILSL 40 (276)
T ss_dssp CEEEEECCSCCHHHHHHHHHHHHHHGGGTCEEEECCCCSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 3788899876655556666777788889999988765444
No 481
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=27.69 E-value=90 Score=24.92 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=24.6
Q ss_pred CceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 8 KLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 8 ~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.++|+++ | || -..+++|..|++.|.+|++++..
T Consensus 166 ~~~vvVv----G-~G--~~g~e~a~~l~~~g~~V~lv~~~ 198 (369)
T 3d1c_A 166 KGQYVVI----G-GN--ESGFDAAYQLAKNGSDIALYTST 198 (369)
T ss_dssp SSEEEEE----C-CS--HHHHHHHHHHHHTTCEEEEECC-
T ss_pred CCEEEEE----C-CC--cCHHHHHHHHHhcCCeEEEEecC
Confidence 4578776 2 22 45678999999999999999865
No 482
>1czn_A Flavodoxin; FMN binding, redox potential, electron transport; HET: FMN; 1.70A {Synechococcus elongatus} SCOP: c.23.5.1 PDB: 1czl_A* 1czu_A* 1d04_A* 1ofv_A* 1czr_A* 1czk_A* 1czo_A* 1czh_A* 1d03_A*
Probab=27.68 E-value=75 Score=23.03 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=28.6
Q ss_pred ceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 9 LNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 9 ~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
|||+++--+. -|.+|+++-.+|..+.+. ++|.++...
T Consensus 1 ~kilIvY~S~-tGnT~~vA~~ia~~l~~~-~~v~~~~~~ 37 (169)
T 1czn_A 1 AKIGLFYGTQ-TGVTQTIAESIQQEFGGE-SIVDLNDIA 37 (169)
T ss_dssp CCEEEEECCS-SSHHHHHHHHHHHHHTST-TTEEEEEGG
T ss_pred CeEEEEEECC-CcHHHHHHHHHHHHhCcc-cceEEEEhh
Confidence 4666665553 499999999999999876 788887765
No 483
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=27.67 E-value=54 Score=25.84 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=20.3
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+=.+=-.++.+|.++||+|.++..
T Consensus 7 GatG~iG~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 7 GGAGFIGSHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp TTTSHHHHHHHHHHHTTTCEEEEECC
T ss_pred eCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 55556667788999999999988753
No 484
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=27.66 E-value=91 Score=22.89 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=34.3
Q ss_pred CCceEEEEeCCC----CCCchH----HH-HHHHHHHHHHCCCeEEEEEeecCCCccccc
Q 046633 7 SKLNVAIIHPDL----GIGGAE----RL-IVDAAVELVSHGHNVHVFTAHHDKRRCFEE 56 (176)
Q Consensus 7 ~~~kI~~~hpdL----giGGAE----Rl-vvdlA~~l~~~Gh~V~l~T~~~d~~hcF~E 56 (176)
.|+||-++-|.+ |.-|.+ -+ +....+.|+++|.+|.-+-...+|.. |-|
T Consensus 3 ~M~~i~ifepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~~~P~~-F~~ 60 (106)
T 3ktb_A 3 AMKKIEIFDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLRDEPQV-YVS 60 (106)
T ss_dssp CCCCEEEEECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETTTCTTH-HHH
T ss_pred CCceEEEechhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccccChHH-Hhc
Confidence 467899999976 444654 22 22346677889999999888877754 544
No 485
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=27.56 E-value=80 Score=21.05 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=23.5
Q ss_pred CCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEE
Q 046633 6 SSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHV 43 (176)
Q Consensus 6 ~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l 43 (176)
.+++||+++..+ +...-.+...|.+.|++|..
T Consensus 7 ~~~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~ 38 (140)
T 3cg0_A 7 DDLPGVLIVEDG------RLAAATLRIQLESLGYDVLG 38 (140)
T ss_dssp -CCCEEEEECCB------HHHHHHHHHHHHHHTCEEEE
T ss_pred CCCceEEEEECC------HHHHHHHHHHHHHCCCeeEE
Confidence 356899999888 45555677777888998864
No 486
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=27.25 E-value=39 Score=26.32 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHCCCeEEEEEe
Q 046633 26 LIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 26 lvvdlA~~l~~~Gh~V~l~T~ 46 (176)
+=-.+|.+|+++|++|.+...
T Consensus 13 IG~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 13 GGMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp THHHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 334688999999999988654
No 487
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=27.21 E-value=89 Score=24.64 Aligned_cols=46 Identities=20% Similarity=0.180 Sum_probs=0.0
Q ss_pred CccccCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcc
Q 046633 1 MEQRRSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRC 53 (176)
Q Consensus 1 m~~~~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hc 53 (176)
|+.+.+++.+|+++ .||.==+. +|..++++|++|+++....-.+.|
T Consensus 1 m~~~~~~~~dvvII-----G~G~aGl~--aA~~l~~~g~~v~lie~~~~gg~~ 46 (325)
T 2q7v_A 1 MTAPTAHDYDVVII-----GGGPAGLT--AAIYTGRAQLSTLILEKGMPGGQI 46 (325)
T ss_dssp -CCCCCEEEEEEEE-----CCSHHHHH--HHHHHHHTTCCEEEEESSCTTGGG
T ss_pred CCCCccccCCEEEE-----CCCHHHHH--HHHHHHHcCCcEEEEeCCCCCccc
No 488
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=27.15 E-value=96 Score=20.84 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=34.2
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeecCCCcccccccCCceeEEEeCCcccc
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHHDKRRCFEETVNGTFPVTVYGDFLPR 73 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d~~hcF~Et~~G~l~V~v~Gd~lPr 73 (176)
.++||+++-.| +...-.+...|.+.|++|..+++ ...+.+.......++.+.+- +|.
T Consensus 3 ~~~~iLivdd~------~~~~~~l~~~L~~~g~~v~~~~~---~~~a~~~l~~~~~dlvi~d~-~~~ 59 (142)
T 2qxy_A 3 LTPTVMVVDES------RITFLAVKNALEKDGFNVIWAKN---EQEAFTFLRREKIDLVFVDV-FEG 59 (142)
T ss_dssp CCCEEEEECSC------HHHHHHHHHHHGGGTCEEEEESS---HHHHHHHHTTSCCSEEEEEC-TTT
T ss_pred CCCeEEEEeCC------HHHHHHHHHHHHhCCCEEEEECC---HHHHHHHHhccCCCEEEEeC-CCC
Confidence 35689999888 45555677788889999874432 22233333333355666644 543
No 489
>4gvo_A LMO2349 protein; structural genomics, IDP05245, L-cystine, ABC transporter, periplasmic binding protein, niaid; HET: HIS; 1.45A {Listeria monocytogenes} PDB: 2o1m_A
Probab=27.15 E-value=39 Score=25.55 Aligned_cols=43 Identities=14% Similarity=0.093 Sum_probs=27.0
Q ss_pred CchHHHHHHHHHHHHHC--CCeEEEEEeecCCCcccccccCCceeEE
Q 046633 21 GGAERLIVDAAVELVSH--GHNVHVFTAHHDKRRCFEETVNGTFPVT 65 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~--Gh~V~l~T~~~d~~hcF~Et~~G~l~V~ 65 (176)
|-..=.-+|++++++++ |.+|.+.... ...++.+..+|++++.
T Consensus 29 G~~~G~~vdl~~~ia~~l~g~~~~~~~~~--~~~~~~~l~~g~~D~~ 73 (243)
T 4gvo_A 29 GKLTGYDVELVKEIDKRLPGYKFKFKTMD--FSNLLVSLGAGKVDIV 73 (243)
T ss_dssp SCEESHHHHHHHHHHHTCTTEEEEEEECC--GGGHHHHHHTTSCSEE
T ss_pred CcEEEhHHHHHHHHHHhccCCeEEEEECC--HHHHHHHHHCCCCCEe
Confidence 43344678999999874 8999987653 3344555555544443
No 490
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=27.12 E-value=91 Score=21.14 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=25.8
Q ss_pred cCCCceEEEEeCCCCCCchHHHHHHHHHHHHHCC-CeEEEEEe
Q 046633 5 RSSKLNVAIIHPDLGIGGAERLIVDAAVELVSHG-HNVHVFTA 46 (176)
Q Consensus 5 ~~~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~G-h~V~l~T~ 46 (176)
..++.||+++-.+ +...-.+...|.+.| ++|..+++
T Consensus 17 ~~~~~~ilivdd~------~~~~~~l~~~L~~~g~~~v~~~~~ 53 (146)
T 4dad_A 17 FQGMINILVASED------ASRLAHLARLVGDAGRYRVTRTVG 53 (146)
T ss_dssp CGGGCEEEEECSC------HHHHHHHHHHHHHHCSCEEEEECC
T ss_pred cCCCCeEEEEeCC------HHHHHHHHHHHhhCCCeEEEEeCC
Confidence 3355799999888 445556777788888 98876543
No 491
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.08 E-value=98 Score=24.44 Aligned_cols=27 Identities=30% Similarity=0.303 Sum_probs=21.0
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
.||+--+=-.+|.+|+++|++|.+...
T Consensus 34 TGas~gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 34 TGASRGIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ECCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 355556667889999999999987654
No 492
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.00 E-value=69 Score=26.16 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=19.5
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=..+|.+|.++|++|.+..-.
T Consensus 15 Gas~gIG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 15 GGANGVGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TTTSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEECC
Confidence 344445557899999999999877543
No 493
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=26.99 E-value=1.3e+02 Score=24.40 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=23.8
Q ss_pred CCceEEEE--eCC---CCCCchHHHHHHHHHHHHHCCCeEEEEEeecC
Q 046633 7 SKLNVAII--HPD---LGIGGAERLIVDAAVELVSHGHNVHVFTAHHD 49 (176)
Q Consensus 7 ~~~kI~~~--hpd---LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~d 49 (176)
+.+||++| ||| +|.|| +...++++|++|.+++....
T Consensus 6 ~~~rvLvv~aHPDDe~l~~GG-------tia~~~~~G~~V~vv~~T~G 46 (270)
T 3dfi_A 6 DRTRILAISPHLDDAVLSVGA-------SLAQAEQDGGKVTVFTVFAG 46 (270)
T ss_dssp CCSEEEEEESSTTHHHHHHHH-------HHHHHHHTTCEEEEEESSCC
T ss_pred CCCCEEEEEeCCchHHHhhHH-------HHHHHHhCCCeEEEEEEeCC
Confidence 35678777 666 23343 33455678999999998753
No 494
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=26.95 E-value=1e+02 Score=29.48 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=40.0
Q ss_pred CCceEEEEeC--CCCCCchH-HHHHHHHHHHHHCCCeEEEEEeecC--CCcccccccCCcee-EEEeCC
Q 046633 7 SKLNVAIIHP--DLGIGGAE-RLIVDAAVELVSHGHNVHVFTAHHD--KRRCFEETVNGTFP-VTVYGD 69 (176)
Q Consensus 7 ~~~kI~~~hp--dLgiGGAE-RlvvdlA~~l~~~Gh~V~l~T~~~d--~~hcF~Et~~G~l~-V~v~Gd 69 (176)
+.+||+++.. | |.| --+..+..+|.+.|.+|+++..+-. ....|.+......+ |.+.|.
T Consensus 528 ~g~kVaIL~a~~d----Gfe~~E~~~~~~~L~~aG~~V~vVs~~~g~~vD~t~~~~~s~~fDAVvlPGG 592 (688)
T 2iuf_A 528 DGLKVGLLASVNK----PASIAQGAKLQVALSSVGVDVVVVAERXANNVDETYSASDAVQFDAVVVADG 592 (688)
T ss_dssp TTCEEEEECCTTC----HHHHHHHHHHHHHHGGGTCEEEEEESSCCTTCCEESTTCCGGGCSEEEECTT
T ss_pred CCCEEEEEecCCC----CCcHHHHHHHHHHHHHCCCEEEEEeccCCcccccchhcCCccccCeEEecCC
Confidence 4478999876 4 555 4578899999999999999998643 22235554433344 555565
No 495
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=26.90 E-value=29 Score=27.21 Aligned_cols=44 Identities=5% Similarity=0.023 Sum_probs=31.4
Q ss_pred cCCCceEEEEeCC-----CCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 5 RSSKLNVAIIHPD-----LGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 5 ~~~~~kI~~~hpd-----LgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
+.+...|+++.|+ +...--..++--+..++.++|+++.+..+..
T Consensus 4 ~~~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~~ 52 (295)
T 3hcw_A 4 TNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNN 52 (295)
T ss_dssp CCCSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCCS
T ss_pred CCCCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3455689999954 4444445677777788888999998877653
No 496
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.89 E-value=1e+02 Score=23.98 Aligned_cols=26 Identities=23% Similarity=0.314 Sum_probs=20.2
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEe
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTA 46 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~ 46 (176)
||+--+=-.+|.+|+++|++|.+...
T Consensus 15 Gas~gIG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 15 GGTHGMGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45555666789999999999988754
No 497
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=26.82 E-value=1e+02 Score=24.19 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=20.3
Q ss_pred CchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 21 GGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 21 GGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
||+--+=-.+|.+|+++|++|.++.-.
T Consensus 35 GasggIG~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 35 GASKGIGREMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp SCSSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 444456667889999999999887643
No 498
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=26.56 E-value=1e+02 Score=25.74 Aligned_cols=35 Identities=23% Similarity=0.129 Sum_probs=24.0
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEeec
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAHH 48 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~~ 48 (176)
++++|+++ |.|.- -..++.++++.|++|.++....
T Consensus 11 ~~~~IlIl----G~G~l---g~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 11 FGATIGII----GGGQL---GKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp TTCEEEEE----CCSHH---HHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCEEEEE----CCCHH---HHHHHHHHHHCCCEEEEEECCC
Confidence 44677774 55544 4456777788999999986543
No 499
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=26.50 E-value=61 Score=24.50 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=22.1
Q ss_pred CCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 20 IGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 20 iGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.||+-.+=..+|.+|.++|++|.++...
T Consensus 11 tGasggiG~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 11 TGASRGIGEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3666677778999999999999887643
No 500
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=26.45 E-value=96 Score=26.40 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=25.3
Q ss_pred CCceEEEEeCCCCCCchHHHHHHHHHHHHHCCCeEEEEEee
Q 046633 7 SKLNVAIIHPDLGIGGAERLIVDAAVELVSHGHNVHVFTAH 47 (176)
Q Consensus 7 ~~~kI~~~hpdLgiGGAERlvvdlA~~l~~~Gh~V~l~T~~ 47 (176)
.+++++++ .|| -.-+++|..|++.|.+|+++...
T Consensus 173 ~~~~vvVi-----GgG--~~g~E~A~~l~~~g~~Vtlv~~~ 206 (468)
T 2qae_A 173 VPKTMVVI-----GGG--VIGLELGSVWARLGAEVTVVEFA 206 (468)
T ss_dssp CCSEEEEE-----CCS--HHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCceEEEE-----CCC--HHHHHHHHHHHHhCCEEEEEecC
Confidence 34678876 223 45678899999999999998765
Done!