BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046635
(128 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27061|PPA1_SOLLC Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1
Length = 255
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 71 YLSRRRAILQKEGFHITGLISNQMDALIGQSLGKRVFKIPNPLYY 115
Y S RR + +EGF I G +Q L+G S+ R FK+PNP+YY
Sbjct: 209 YKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPMYY 253
>sp|O82122|VSP2_ARATH Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1
SV=1
Length = 265
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 71 YLSRRRAILQKEGFHITGLISNQMDALIGQSLGKRVFKIPNPLYY 115
Y S+ R L K+G++I G I +Q L+ + G RVFK+PNPLYY
Sbjct: 219 YKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 262
>sp|O49195|VSP1_ARATH Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2
SV=2
Length = 270
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 71 YLSRRRAILQKEGFHITGLISNQMDALIGQSLGKRVFKIPNPLYY 115
Y S+ R L K+G++I G I +Q L+ + G RVFK+PNPLYY
Sbjct: 224 YKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYY 267
>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1
Length = 254
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 71 YLSRRRAILQKEGFHITGLISNQMDALIGQSLGK-RVFKIPNPLYY 115
Y S R L ++G+ I G+I +Q L+G G+ R FK+PNP+YY
Sbjct: 207 YKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPMYY 252
>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1
Length = 254
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 71 YLSRRRAILQKEGFHITGLISNQMDALIGQSLGK-RVFKIPNPLYY 115
Y + R L ++G++I G+I +Q L+G G+ R FK+PNPLYY
Sbjct: 207 YKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNPLYY 252
>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2
SV=2
Length = 291
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 67 DSREYLSRRRAILQKEGFHITGLISNQMDALIGQSLGK-RVFKIPNP 112
++ Y + R L ++G++I G+I +Q L+G G+ R FK+PNP
Sbjct: 200 NAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNP 246
>sp|O04195|Y2992_ARATH Uncharacterized protein At2g39920 OS=Arabidopsis thaliana
GN=At2g39920 PE=2 SV=2
Length = 283
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 65 QMDSREYLSRRRAILQKE----------GFHITGLISNQMDALIGQ--SLGKRVFKIPNP 112
Q+ SR Y I+ +E G + G+I N MD L GQ KR+FK+P+
Sbjct: 213 QLKSRGYSDWSHLIMSREDTRQKEELERGHRVIGVIGNHMDVLRGQWNWQSKRLFKLPSL 272
Query: 113 LY 114
Y
Sbjct: 273 TY 274
>sp|Q6AIZ4|CINAL_DESPS CinA-like protein OS=Desulfotalea psychrophila (strain LSv54 / DSM
12343) GN=DP2957 PE=3 SV=1
Length = 413
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%)
Query: 29 VGTKVLRVTNSNIYVFAYSLEFVENGLHSCRLDNEMQMDSREYLSRRRAILQKEGFHITG 88
V T+V R+ +N Y F E L D + R + S RAI G HI G
Sbjct: 193 VNTRVSRLKLTNDVHIGYYPVFPEVHLSLLIRDTNPKTAKRLFDSSCRAIKTALGDHIYG 252
Query: 89 LISNQMDALIGQSLGKR 105
+ M ++GQ+L KR
Sbjct: 253 YDRDTMSQIVGQALVKR 269
>sp|Q9UBU7|DBF4A_HUMAN Protein DBF4 homolog A OS=Homo sapiens GN=DBF4 PE=1 SV=1
Length = 674
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 55 LHSCRLDNEMQMDSREYLSRRRAILQKEGFHITGLISNQMDALIGQSLGKRVFKIPNP 112
L S + ++Q D ++ R L K+ I+ LISN+ +A Q+LG R+ +P+P
Sbjct: 55 LPSVTISEKLQKDIKDLGGRVEEFLSKD---ISYLISNKKEAKFAQTLG-RISPVPSP 108
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 48 LEFVENGLHSCRLDNEMQMDSREYLSRRRAILQKEGFHITGL 89
+E +E L S L N +Q+DS E+ R I ++EG + L
Sbjct: 2748 VEAIEKRLISPELANMIQIDSSEFSDHRAQIEKQEGIEVCAL 2789
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,925,018
Number of Sequences: 539616
Number of extensions: 1592801
Number of successful extensions: 4584
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 4578
Number of HSP's gapped (non-prelim): 11
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)