Query 046636
Match_columns 103
No_of_seqs 153 out of 629
Neff 4.3
Searched_HMMs 46136
Date Fri Mar 29 02:55:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046636.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046636hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK00183 hypothetical protein; 99.0 1.9E-10 4.2E-15 85.6 1.9 25 28-52 132-156 (157)
2 PRK01617 hypothetical protein; 98.9 3.2E-10 7E-15 83.9 1.7 23 28-50 132-154 (154)
3 PF02810 SEC-C: SEC-C motif; 98.8 1.3E-09 2.9E-14 57.4 1.2 20 32-51 1-20 (21)
4 PRK10396 hypothetical protein; 98.8 2.6E-09 5.7E-14 81.5 2.3 31 20-50 191-221 (221)
5 PRK01752 hypothetical protein; 98.7 6.1E-09 1.3E-13 77.5 1.7 23 28-50 132-154 (156)
6 PRK13103 secA preprotein trans 98.5 3.5E-08 7.5E-13 89.4 1.8 31 21-51 882-912 (913)
7 PRK02250 hypothetical protein; 98.4 7.8E-08 1.7E-12 71.8 1.6 28 22-49 139-166 (166)
8 COG3318 Predicted metal-bindin 98.4 1.3E-07 2.7E-12 74.0 1.5 29 22-50 188-216 (216)
9 PRK13107 preprotein translocas 98.4 1.3E-07 2.9E-12 85.6 1.7 31 21-51 877-907 (908)
10 PRK12900 secA preprotein trans 98.3 2.1E-07 4.5E-12 85.2 2.5 31 20-50 995-1025(1025)
11 PRK12318 methionine aminopepti 98.2 4.3E-07 9.4E-12 71.8 1.7 46 30-75 1-47 (291)
12 PRK05590 hypothetical protein; 98.2 6.4E-07 1.4E-11 67.8 2.2 35 16-50 131-165 (166)
13 COG3012 Uncharacterized protei 98.0 1.7E-06 3.7E-11 64.6 1.5 21 29-50 131-151 (151)
14 PRK13104 secA preprotein trans 98.0 2.6E-06 5.6E-11 77.3 1.4 30 22-51 866-895 (896)
15 PRK12901 secA preprotein trans 97.8 1.1E-05 2.3E-10 74.6 1.6 34 19-52 1064-1102(1112)
16 PRK04233 hypothetical protein; 96.9 0.00034 7.3E-09 50.8 1.0 23 31-53 5-27 (129)
17 COG0653 SecA Preprotein transl 96.6 0.0008 1.7E-08 61.1 1.0 18 27-45 805-822 (822)
18 PRK01842 hypothetical protein; 96.4 0.0015 3.2E-08 48.6 1.4 25 28-52 6-40 (149)
19 PRK01752 hypothetical protein; 96.4 0.00065 1.4E-08 50.7 -0.8 22 31-52 3-24 (156)
20 PRK12904 preprotein translocas 96.3 0.0015 3.2E-08 59.4 1.2 18 34-51 812-829 (830)
21 PRK01617 hypothetical protein; 96.1 0.0022 4.8E-08 47.6 1.0 19 34-52 3-21 (154)
22 PRK02250 hypothetical protein; 96.0 0.0016 3.5E-08 48.7 -0.1 20 34-53 2-21 (166)
23 PRK00183 hypothetical protein; 95.8 0.0035 7.6E-08 46.9 0.8 21 32-52 2-22 (157)
24 COG3318 Predicted metal-bindin 92.1 0.038 8.2E-07 43.5 -0.3 21 28-48 2-23 (216)
25 COG3012 Uncharacterized protei 90.2 0.079 1.7E-06 39.8 -0.2 19 34-52 3-21 (151)
No 1
>PRK00183 hypothetical protein; Provisional
Probab=98.97 E-value=1.9e-10 Score=85.61 Aligned_cols=25 Identities=48% Similarity=1.026 Sum_probs=22.2
Q ss_pred CCCCCCCccccCCcchhhhhcCccc
Q 046636 28 KKIPRNKVCPCGSKKKYKACCGTAA 52 (103)
Q Consensus 28 ~kigRNd~C~CGSGKKyKkCh~~~~ 52 (103)
.++|||||||||||+|||+||+...
T Consensus 132 ~kvgRNdpCpCGSGkKyKkCCg~~~ 156 (157)
T PRK00183 132 LKAGRNDPCPCGSGQKFKKCCAPYL 156 (157)
T ss_pred CCCCCCCCCcCCCCHHHHHhccccc
Confidence 4589999999999999999998753
No 2
>PRK01617 hypothetical protein; Provisional
Probab=98.93 E-value=3.2e-10 Score=83.92 Aligned_cols=23 Identities=57% Similarity=1.298 Sum_probs=21.0
Q ss_pred CCCCCCCccccCCcchhhhhcCc
Q 046636 28 KKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 28 ~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
.++|||||||||||+|||+||++
T Consensus 132 ~~~grN~pCpCgSgkK~K~Ccg~ 154 (154)
T PRK01617 132 PQFGRNDPCPCGSGKKFKKCCGQ 154 (154)
T ss_pred CcCCCCCccccCCCcchhhhccC
Confidence 45899999999999999999974
No 3
>PF02810 SEC-C: SEC-C motif; InterPro: IPR004027 The SEC-C motif found in the C terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.; PDB: 1OZB_J 1TM6_A 2I9W_A 2JQ5_A.
Probab=98.82 E-value=1.3e-09 Score=57.42 Aligned_cols=20 Identities=70% Similarity=1.499 Sum_probs=18.4
Q ss_pred CCCccccCCcchhhhhcCcc
Q 046636 32 RNKVCPCGSKKKYKACCGTA 51 (103)
Q Consensus 32 RNd~C~CGSGKKyKkCh~~~ 51 (103)
||++||||||++|+.||+..
T Consensus 1 ~n~~CpCgSg~~y~~CC~~~ 20 (21)
T PF02810_consen 1 RNDPCPCGSGKKYKDCCGPY 20 (21)
T ss_dssp TTSBTTTSCSSBHHHCTTHC
T ss_pred CCCcCcCCCCchHHHhCccc
Confidence 79999999999999999854
No 4
>PRK10396 hypothetical protein; Provisional
Probab=98.78 E-value=2.6e-09 Score=81.46 Aligned_cols=31 Identities=45% Similarity=0.858 Sum_probs=27.6
Q ss_pred CCCcccCCCCCCCCCccccCCcchhhhhcCc
Q 046636 20 DSRFKPNEKKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 20 ~~~~~~~~~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
..++++...+++||+||+||||||||+||+.
T Consensus 191 ~~~~~~~~~~~~rnd~c~cgsgkk~k~c~~~ 221 (221)
T PRK10396 191 VQQPIKAEEKVGRNDPCPCGSGKKFKQCCLH 221 (221)
T ss_pred ccCCccccCCCCCCCCCCCCCCCEeeecCCC
Confidence 3577888889999999999999999999973
No 5
>PRK01752 hypothetical protein; Provisional
Probab=98.69 E-value=6.1e-09 Score=77.50 Aligned_cols=23 Identities=43% Similarity=0.940 Sum_probs=21.0
Q ss_pred CCCCCCCccccCCcchhhhhcCc
Q 046636 28 KKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 28 ~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
.++|||+|||||||+|||+||+.
T Consensus 132 ~~v~rn~pCpCgsGkK~KkCc~~ 154 (156)
T PRK01752 132 PLPTMKQPCVCGSGKKFKHCCGG 154 (156)
T ss_pred CCCCCCCcccCCCchHHHHhccc
Confidence 45899999999999999999984
No 6
>PRK13103 secA preprotein translocase subunit SecA; Reviewed
Probab=98.52 E-value=3.5e-08 Score=89.35 Aligned_cols=31 Identities=48% Similarity=0.774 Sum_probs=28.8
Q ss_pred CCcccCCCCCCCCCccccCCcchhhhhcCcc
Q 046636 21 SRFKPNEKKIPRNKVCPCGSKKKYKACCGTA 51 (103)
Q Consensus 21 ~~~~~~~~kigRNd~C~CGSGKKyKkCh~~~ 51 (103)
.+|++..+++|||||||||||+|||+||+..
T Consensus 882 ~~~v~~~~k~gRNdpcpcGsGkKyK~ccgk~ 912 (913)
T PRK13103 882 SAPVRNEQKLGRNEPCWCGSGKKFKHCHGQI 912 (913)
T ss_pred CCCccCCCCCCCCCCccCCCCCEeeeecccC
Confidence 5788999999999999999999999999874
No 7
>PRK02250 hypothetical protein; Provisional
Probab=98.43 E-value=7.8e-08 Score=71.80 Aligned_cols=28 Identities=46% Similarity=0.879 Sum_probs=24.5
Q ss_pred CcccCCCCCCCCCccccCCcchhhhhcC
Q 046636 22 RFKPNEKKIPRNKVCPCGSKKKYKACCG 49 (103)
Q Consensus 22 ~~~~~~~kigRNd~C~CGSGKKyKkCh~ 49 (103)
.+++...+++||+||+||||+|||+||+
T Consensus 139 ~~~~~~~k~~rn~~c~cgs~kk~k~c~~ 166 (166)
T PRK02250 139 NQSVSSLKQGRNDPCICGSGKKFKKCCG 166 (166)
T ss_pred ccccccCCCCCCCCcccCCCCEeeeccC
Confidence 3566777899999999999999999985
No 8
>COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA [General function prediction only]
Probab=98.38 E-value=1.3e-07 Score=73.99 Aligned_cols=29 Identities=52% Similarity=1.059 Sum_probs=24.7
Q ss_pred CcccCCCCCCCCCccccCCcchhhhhcCc
Q 046636 22 RFKPNEKKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 22 ~~~~~~~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
.+.+...+.|||||||||||+|||.||+.
T Consensus 188 ~~~~~~~k~grnD~cpc~sg~k~k~cc~~ 216 (216)
T COG3318 188 KPIKEEEKTGRNDPCPCGSGKKFKQCCGH 216 (216)
T ss_pred hHhhhcCCCCCCCCCCCcccchHHHhhcC
Confidence 35566677899999999999999999973
No 9
>PRK13107 preprotein translocase subunit SecA; Reviewed
Probab=98.37 E-value=1.3e-07 Score=85.59 Aligned_cols=31 Identities=42% Similarity=0.907 Sum_probs=28.8
Q ss_pred CCcccCCCCCCCCCccccCCcchhhhhcCcc
Q 046636 21 SRFKPNEKKIPRNKVCPCGSKKKYKACCGTA 51 (103)
Q Consensus 21 ~~~~~~~~kigRNd~C~CGSGKKyKkCh~~~ 51 (103)
+++++..+++|||||||||||++||.||+..
T Consensus 877 ~~~vr~~~k~gRNd~cpcgsgkk~K~c~gk~ 907 (908)
T PRK13107 877 TPMIRDGEKVGRNDPCPCGSGRKYKQCHGKL 907 (908)
T ss_pred CCccccCCCCCCCCCccCCCCceeeeecccC
Confidence 5788999999999999999999999999864
No 10
>PRK12900 secA preprotein translocase subunit SecA; Reviewed
Probab=98.35 E-value=2.1e-07 Score=85.18 Aligned_cols=31 Identities=52% Similarity=0.849 Sum_probs=28.4
Q ss_pred CCCcccCCCCCCCCCccccCCcchhhhhcCc
Q 046636 20 DSRFKPNEKKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 20 ~~~~~~~~~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
.++|++...+++||+|||||||++||+||+.
T Consensus 995 ~~~pvr~~~k~gRNDpCpCGSGKKyK~Ccgk 1025 (1025)
T PRK12900 995 KQQPVIAEKKPGRNDPCPCGSGKKYKNCHGQ 1025 (1025)
T ss_pred CCCccccccCCCCCCcccCCCCCchhhhcCC
Confidence 3678899999999999999999999999974
No 11
>PRK12318 methionine aminopeptidase; Provisional
Probab=98.24 E-value=4.3e-07 Score=71.81 Aligned_cols=46 Identities=26% Similarity=0.275 Sum_probs=31.5
Q ss_pred CCCCCccccCCcchhhhhcCccccCchhhhh-hccccCCcccccccc
Q 046636 30 IPRNKVCPCGSKKKYKACCGTAAGRSSAKFA-VNQTVDSKRGRKERK 75 (103)
Q Consensus 30 igRNd~C~CGSGKKyKkCh~~~~~~~~~~~~-~g~~vp~~~~~K~~~ 75 (103)
+.||||||||||+|+|.||.....-.+.... +-++-+.+-+||++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~IKs~~ 47 (291)
T PRK12318 1 MKRNDPCWCGSGKKWKHCHYPTKPERSLENLKQLYASQYDIIIKTPE 47 (291)
T ss_pred CCCCCCCccCCCccccccccccCccccccccchhccCCCceEECCHH
Confidence 3599999999999999999886544444433 233334444477765
No 12
>PRK05590 hypothetical protein; Provisional
Probab=98.22 E-value=6.4e-07 Score=67.75 Aligned_cols=35 Identities=51% Similarity=1.022 Sum_probs=30.2
Q ss_pred ccCCCCCcccCCCCCCCCCccccCCcchhhhhcCc
Q 046636 16 RSHDDSRFKPNEKKIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 16 ~~~~~~~~~~~~~kigRNd~C~CGSGKKyKkCh~~ 50 (103)
..++.+.+++...++|||+||+||||++||.||+.
T Consensus 131 ~~~~~s~~v~akkK~GRNDPCPCGSGKKyKkc~GK 165 (166)
T PRK05590 131 KEWKKSKTVVNENKVGRNDPCPCGSGKKYKKCCGK 165 (166)
T ss_pred HHhccCCccccCCCCCCCCCCCCCCCCchHHHhcc
Confidence 45566777888888999999999999999999975
No 13
>COG3012 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.05 E-value=1.7e-06 Score=64.63 Aligned_cols=21 Identities=57% Similarity=1.366 Sum_probs=19.2
Q ss_pred CCCCCCccccCCcchhhhhcCc
Q 046636 29 KIPRNKVCPCGSKKKYKACCGT 50 (103)
Q Consensus 29 kigRNd~C~CGSGKKyKkCh~~ 50 (103)
..+| |||+||||||||+||+.
T Consensus 131 ~~gr-dpC~CGsgkKfKkCCG~ 151 (151)
T COG3012 131 PLGR-DPCPCGSGKKFKKCCGQ 151 (151)
T ss_pred cccC-CCccCCCCchhhhccCc
Confidence 5789 99999999999999974
No 14
>PRK13104 secA preprotein translocase subunit SecA; Reviewed
Probab=97.96 E-value=2.6e-06 Score=77.33 Aligned_cols=30 Identities=63% Similarity=1.155 Sum_probs=26.7
Q ss_pred CcccCCCCCCCCCccccCCcchhhhhcCcc
Q 046636 22 RFKPNEKKIPRNKVCPCGSKKKYKACCGTA 51 (103)
Q Consensus 22 ~~~~~~~kigRNd~C~CGSGKKyKkCh~~~ 51 (103)
.+++..+++|||+|||||||+|||.||+..
T Consensus 866 ~~~re~~kvGRNdpcpcGsGKKyK~c~G~~ 895 (896)
T PRK13104 866 TFRRQEKKIGRNDPCPCGSGKKYKACHGSL 895 (896)
T ss_pred cccccccCCCCCCCccCCCCCeeeeeeeee
Confidence 455788999999999999999999999864
No 15
>PRK12901 secA preprotein translocase subunit SecA; Reviewed
Probab=97.75 E-value=1.1e-05 Score=74.63 Aligned_cols=34 Identities=41% Similarity=0.445 Sum_probs=30.6
Q ss_pred CCCCcccCCCCCCCCCcccc-----CCcchhhhhcCccc
Q 046636 19 DDSRFKPNEKKIPRNKVCPC-----GSKKKYKACCGTAA 52 (103)
Q Consensus 19 ~~~~~~~~~~kigRNd~C~C-----GSGKKyKkCh~~~~ 52 (103)
...++++..+++|||+|||| |||++||+||+...
T Consensus 1064 ~~~~~vr~~~kigRNd~c~c~~~~~GsgKk~K~c~~~~~ 1102 (1112)
T PRK12901 1064 VKETPVRVEKKIGRNDPVPCQNVDGGSGKKYKFKHAENL 1102 (1112)
T ss_pred CCCCCcccCCCCCCCCceeecccCCCCCceeeeeccccc
Confidence 34688999999999999999 99999999999765
No 16
>PRK04233 hypothetical protein; Provisional
Probab=96.92 E-value=0.00034 Score=50.75 Aligned_cols=23 Identities=35% Similarity=0.998 Sum_probs=19.5
Q ss_pred CCCCccccCCcchhhhhcCcccc
Q 046636 31 PRNKVCPCGSKKKYKACCGTAAG 53 (103)
Q Consensus 31 gRNd~C~CGSGKKyKkCh~~~~~ 53 (103)
.+|.+||||||+.|..||+....
T Consensus 5 ~~~~~CPCGSg~~y~~CC~p~h~ 27 (129)
T PRK04233 5 TPTDPCPCGRPADYARCCGPYHA 27 (129)
T ss_pred CCCCCCCCcCCChHHHHhHHHHC
Confidence 46788999999999999986553
No 17
>COG0653 SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion]
Probab=96.58 E-value=0.0008 Score=61.09 Aligned_cols=18 Identities=67% Similarity=1.149 Sum_probs=16.1
Q ss_pred CCCCCCCCccccCCcchhh
Q 046636 27 EKKIPRNKVCPCGSKKKYK 45 (103)
Q Consensus 27 ~~kigRNd~C~CGSGKKyK 45 (103)
..++|||+||||||| |||
T Consensus 805 ~~~~~rn~~cpcgsG-kyk 822 (822)
T COG0653 805 LGKIGRNEPCPCGSG-KYK 822 (822)
T ss_pred hccccCCCCCCCCCC-CCC
Confidence 348999999999999 997
No 18
>PRK01842 hypothetical protein; Provisional
Probab=96.42 E-value=0.0015 Score=48.62 Aligned_cols=25 Identities=40% Similarity=1.011 Sum_probs=21.6
Q ss_pred CCCCCCCccccCCcc----------hhhhhcCccc
Q 046636 28 KKIPRNKVCPCGSKK----------KYKACCGTAA 52 (103)
Q Consensus 28 ~kigRNd~C~CGSGK----------KyKkCh~~~~ 52 (103)
+...+|++||||||+ .|..||+-..
T Consensus 6 ~~~~~~~~CPCgS~~~~~~~~~~~~~Y~~CC~p~h 40 (149)
T PRK01842 6 MAPARPDACPCGGAAPGAAANARAPRYAACCGRFI 40 (149)
T ss_pred CCCCCCCCCCCCCCccccccccccccHHHHhHHHH
Confidence 456799999999999 8999998655
No 19
>PRK01752 hypothetical protein; Provisional
Probab=96.36 E-value=0.00065 Score=50.69 Aligned_cols=22 Identities=41% Similarity=0.939 Sum_probs=18.8
Q ss_pred CCCCccccCCcchhhhhcCccc
Q 046636 31 PRNKVCPCGSKKKYKACCGTAA 52 (103)
Q Consensus 31 gRNd~C~CGSGKKyKkCh~~~~ 52 (103)
.-|.+||||||+.|..||+...
T Consensus 3 ~~~~~CPCGSg~~y~~CC~p~h 24 (156)
T PRK01752 3 LLLEACPCQSGKHYADCCGPFH 24 (156)
T ss_pred CcCCCCCCcCCChHHHHHHHHh
Confidence 3578899999999999998654
No 20
>PRK12904 preprotein translocase subunit SecA; Reviewed
Probab=96.34 E-value=0.0015 Score=59.42 Aligned_cols=18 Identities=61% Similarity=1.276 Sum_probs=16.8
Q ss_pred CccccCCcchhhhhcCcc
Q 046636 34 KVCPCGSKKKYKACCGTA 51 (103)
Q Consensus 34 d~C~CGSGKKyKkCh~~~ 51 (103)
+|||||||+|||.||+..
T Consensus 812 ~~c~cgsgkk~K~c~g~~ 829 (830)
T PRK12904 812 DPCPCGSGKKYKHCHGRL 829 (830)
T ss_pred CCCCCCCCcchhhhcCcC
Confidence 999999999999999864
No 21
>PRK01617 hypothetical protein; Provisional
Probab=96.10 E-value=0.0022 Score=47.58 Aligned_cols=19 Identities=42% Similarity=1.170 Sum_probs=16.7
Q ss_pred CccccCCcchhhhhcCccc
Q 046636 34 KVCPCGSKKKYKACCGTAA 52 (103)
Q Consensus 34 d~C~CGSGKKyKkCh~~~~ 52 (103)
++||||||+.|..||+...
T Consensus 3 ~~CPCGSg~~Y~~CC~p~h 21 (154)
T PRK01617 3 QLCPCGSALEYSLCCQPYL 21 (154)
T ss_pred CCCCCCCCchHHHHhHHHh
Confidence 4899999999999998754
No 22
>PRK02250 hypothetical protein; Provisional
Probab=96.02 E-value=0.0016 Score=48.66 Aligned_cols=20 Identities=40% Similarity=1.044 Sum_probs=17.2
Q ss_pred CccccCCcchhhhhcCcccc
Q 046636 34 KVCPCGSKKKYKACCGTAAG 53 (103)
Q Consensus 34 d~C~CGSGKKyKkCh~~~~~ 53 (103)
.+||||||+.|..||+....
T Consensus 2 ~~CPCgSg~~y~~CC~p~h~ 21 (166)
T PRK02250 2 MSCPCGSTQTYSQCCEPIHL 21 (166)
T ss_pred CcCCCCCCchHHHHhHHHHC
Confidence 46999999999999987553
No 23
>PRK00183 hypothetical protein; Provisional
Probab=95.80 E-value=0.0035 Score=46.87 Aligned_cols=21 Identities=43% Similarity=1.059 Sum_probs=18.4
Q ss_pred CCCccccCCcchhhhhcCccc
Q 046636 32 RNKVCPCGSKKKYKACCGTAA 52 (103)
Q Consensus 32 RNd~C~CGSGKKyKkCh~~~~ 52 (103)
.|.+||||||+.|..||+...
T Consensus 2 ~~~~CPCGSg~~y~~CC~p~h 22 (157)
T PRK00183 2 SVSICPCGSGDLLDACCGRYH 22 (157)
T ss_pred CCCCCCCcCCChHHHHhHHHH
Confidence 588999999999999988654
No 24
>COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA [General function prediction only]
Probab=92.08 E-value=0.038 Score=43.51 Aligned_cols=21 Identities=48% Similarity=0.801 Sum_probs=18.3
Q ss_pred CCCCCCCccccCCc-chhhhhc
Q 046636 28 KKIPRNKVCPCGSK-KKYKACC 48 (103)
Q Consensus 28 ~kigRNd~C~CGSG-KKyKkCh 48 (103)
.+..||++|||+|+ ++|+.||
T Consensus 2 ~k~~~n~~~p~~s~~kky~q~~ 23 (216)
T COG3318 2 GKLNENDLCPCLSALKKYKQDG 23 (216)
T ss_pred CcccccccCccchhHHHHHHHh
Confidence 35789999999999 9999964
No 25
>COG3012 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.18 E-value=0.079 Score=39.85 Aligned_cols=19 Identities=47% Similarity=1.298 Sum_probs=17.0
Q ss_pred CccccCCcchhhhhcCccc
Q 046636 34 KVCPCGSKKKYKACCGTAA 52 (103)
Q Consensus 34 d~C~CGSGKKyKkCh~~~~ 52 (103)
.+||||||..|-.||+...
T Consensus 3 ~~CPCGsg~~Y~~CC~p~h 21 (151)
T COG3012 3 QLCPCGSGLEYSLCCGPYH 21 (151)
T ss_pred CcCcCCCCChHHHhccccc
Confidence 4699999999999999865
Done!