Query 046637
Match_columns 301
No_of_seqs 137 out of 1265
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 04:27:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g7s_A Long-chain-fatty-acid-- 100.0 9.3E-45 3.2E-49 331.7 28.6 269 5-290 10-287 (549)
2 3ivr_A Putative long-chain-fat 100.0 2.5E-44 8.6E-49 326.1 29.9 264 10-289 2-266 (509)
3 3r44_A Fatty acyl COA syntheta 100.0 1.4E-44 4.8E-49 328.2 27.5 274 8-298 10-285 (517)
4 1mdb_A 2,3-dihydroxybenzoate-A 100.0 2.2E-44 7.5E-49 328.5 28.5 272 10-298 21-299 (539)
5 3o83_A Peptide arylation enzym 100.0 7E-44 2.4E-48 325.5 31.3 275 10-298 26-308 (544)
6 3rix_A Luciferase, luciferin 4 100.0 5.3E-44 1.8E-48 326.8 29.8 282 7-299 13-309 (550)
7 3ni2_A 4-coumarate:COA ligase; 100.0 1.3E-43 4.6E-48 323.2 31.5 277 8-299 15-299 (536)
8 1v25_A Long-chain-fatty-acid-C 100.0 1.2E-43 4E-48 323.8 28.2 272 11-297 15-293 (541)
9 3fce_A D-alanine--poly(phospho 100.0 1.7E-42 5.9E-47 314.3 27.4 258 14-299 1-263 (512)
10 3rg2_A Enterobactin synthase c 100.0 6.4E-42 2.2E-46 316.9 31.6 263 9-288 22-291 (617)
11 2d1s_A Luciferase, luciferin 4 100.0 9.2E-42 3.1E-46 311.7 30.8 272 14-298 25-310 (548)
12 1t5h_X 4-chlorobenzoyl COA lig 100.0 2.8E-42 9.6E-47 312.3 26.2 249 14-289 2-262 (504)
13 1ry2_A Acetyl-coenzyme A synth 100.0 8.3E-42 2.8E-46 318.0 30.0 284 14-298 82-385 (663)
14 4fuq_A Malonyl COA synthetase; 100.0 1.3E-41 4.4E-46 307.7 29.7 262 18-298 4-269 (503)
15 3c5e_A Acyl-coenzyme A synthet 100.0 4.4E-41 1.5E-45 308.4 33.0 267 9-289 33-315 (570)
16 2v7b_A Benzoate-coenzyme A lig 100.0 1.4E-41 4.8E-46 309.5 29.3 268 15-293 25-296 (529)
17 1pg4_A Acetyl-COA synthetase; 100.0 1E-41 3.4E-46 317.1 28.1 280 15-298 77-379 (652)
18 3t5a_A Long-chain-fatty-acid-- 100.0 1.9E-42 6.4E-47 311.7 22.5 271 5-298 15-312 (480)
19 3ipl_A 2-succinylbenzoate--COA 100.0 2.7E-42 9.1E-47 312.3 23.0 273 14-294 1-274 (501)
20 3etc_A AMP-binding protein; ad 100.0 7.5E-41 2.6E-45 307.3 32.9 273 13-298 54-342 (580)
21 3e7w_A D-alanine--poly(phospho 100.0 4.4E-41 1.5E-45 304.9 28.5 256 14-298 1-261 (511)
22 3tsy_A Fusion protein 4-coumar 100.0 5.4E-41 1.9E-45 325.4 29.6 276 13-298 60-345 (979)
23 1amu_A GRSA, gramicidin synthe 100.0 6E-41 2.1E-45 307.0 27.0 259 4-288 28-290 (563)
24 3l8c_A D-alanine--poly(phospho 100.0 2.1E-40 7.3E-45 301.2 29.9 256 12-298 2-265 (521)
25 4gr5_A Non-ribosomal peptide s 100.0 1.2E-40 4.2E-45 305.7 27.3 248 12-290 73-322 (570)
26 4dg8_A PA1221; ANL superfamily 100.0 1.4E-40 4.9E-45 307.3 27.6 247 10-289 23-271 (620)
27 3kxw_A Saframycin MX1 syntheta 100.0 4.2E-41 1.4E-45 310.3 23.2 257 11-288 8-277 (590)
28 3gqw_A Fatty acid AMP ligase; 100.0 2.6E-38 9.1E-43 290.8 26.4 255 11-289 18-288 (576)
29 2vsq_A Surfactin synthetase su 100.0 1.1E-38 3.7E-43 316.7 24.3 260 2-288 452-714 (1304)
30 3ite_A SIDN siderophore synthe 100.0 3.8E-38 1.3E-42 288.9 24.6 256 9-288 15-289 (562)
31 3nyq_A Malonyl-COA ligase; A/B 100.0 8.2E-38 2.8E-42 282.9 18.3 243 8-288 16-260 (505)
32 4gs5_A Acyl-COA synthetase (AM 99.8 8.8E-21 3E-25 163.9 9.4 114 182-298 36-149 (358)
33 3hgu_A EHPF; phenazine, antibi 99.7 6.8E-18 2.3E-22 146.6 8.4 110 180-290 88-224 (369)
34 2y27_A Phenylacetate-coenzyme 99.7 2.5E-17 8.7E-22 146.1 11.2 111 179-289 86-200 (437)
35 3qov_A Phenylacetate-coenzyme 99.7 2.9E-17 1E-21 145.7 10.6 110 180-289 82-196 (436)
36 2y4o_A Phenylacetate-coenzyme 99.7 5.8E-17 2E-21 144.1 12.5 111 179-289 88-202 (443)
37 3qov_A Phenylacetate-coenzyme 95.5 0.22 7.5E-06 43.4 12.6 109 38-147 104-216 (436)
38 2y27_A Phenylacetate-coenzyme 95.5 0.24 8.3E-06 43.1 12.9 90 38-128 108-199 (437)
39 2y4o_A Phenylacetate-coenzyme 95.4 0.25 8.5E-06 43.2 12.8 90 38-128 110-201 (443)
40 1mdb_A 2,3-dihydroxybenzoate-A 91.3 4.1 0.00014 36.4 13.4 117 27-147 180-308 (539)
41 3hgu_A EHPF; phenazine, antibi 90.5 0.73 2.5E-05 39.0 7.4 86 38-125 109-219 (369)
42 3o83_A Peptide arylation enzym 90.4 3.4 0.00012 37.0 12.1 117 27-147 189-317 (544)
43 3rix_A Luciferase, luciferin 4 90.0 1.9 6.5E-05 38.7 10.0 100 182-286 34-137 (550)
44 3r44_A Fatty acyl COA syntheta 89.4 4.4 0.00015 36.0 11.9 105 38-147 188-294 (517)
45 2d1s_A Luciferase, luciferin 4 88.9 2.8 9.4E-05 37.6 10.3 95 29-125 192-297 (548)
46 3ipl_A 2-succinylbenzoate--COA 88.6 4.9 0.00017 35.4 11.6 96 27-126 161-266 (501)
47 3g7s_A Long-chain-fatty-acid-- 86.6 8.6 0.00029 34.4 12.0 103 181-285 32-138 (549)
48 1v25_A Long-chain-fatty-acid-C 86.5 6.4 0.00022 35.2 11.1 108 38-146 194-302 (541)
49 3ni2_A 4-coumarate:COA ligase; 85.5 6.5 0.00022 35.0 10.6 98 180-285 34-135 (536)
50 3ivr_A Putative long-chain-fat 85.4 6.9 0.00024 34.5 10.7 94 181-284 19-116 (509)
51 3rg2_A Enterobactin synthase c 84.8 20 0.00068 32.5 13.7 87 38-128 202-291 (617)
52 4fuq_A Malonyl COA synthetase; 83.9 12 0.00041 33.0 11.5 94 181-281 13-110 (503)
53 3fce_A D-alanine--poly(phospho 82.9 3.1 0.00011 36.9 7.3 83 38-123 162-247 (512)
54 1amu_A GRSA, gramicidin synthe 82.7 14 0.00047 33.2 11.5 84 201-285 63-150 (563)
55 3etc_A AMP-binding protein; ad 82.6 12 0.0004 33.8 11.1 94 181-279 69-166 (580)
56 3c5e_A Acyl-coenzyme A synthet 82.5 16 0.00053 32.9 11.8 100 181-285 56-160 (570)
57 3t5a_A Long-chain-fatty-acid-- 82.1 14 0.00049 32.0 11.3 108 180-288 36-149 (480)
58 1t5h_X 4-chlorobenzoyl COA lig 81.9 17 0.00057 32.0 11.7 97 181-285 15-117 (504)
59 1pg4_A Acetyl-COA synthetase; 81.7 17 0.0006 33.2 12.0 94 182-279 90-187 (652)
60 3kxw_A Saframycin MX1 syntheta 81.2 10 0.00034 34.2 10.1 96 27-125 165-274 (590)
61 1ry2_A Acetyl-coenzyme A synth 81.2 17 0.00058 33.4 11.8 97 180-280 94-195 (663)
62 3e7w_A D-alanine--poly(phospho 80.4 6.5 0.00022 34.8 8.4 84 38-124 161-247 (511)
63 4b2g_A GH3-1 auxin conjugating 79.8 0.81 2.8E-05 41.6 2.2 31 180-210 96-127 (609)
64 4gr5_A Non-ribosomal peptide s 78.2 20 0.0007 32.1 11.1 80 201-281 99-182 (570)
65 2v7b_A Benzoate-coenzyme A lig 78.1 13 0.00043 33.0 9.6 84 201-285 47-134 (529)
66 4epl_A Jasmonic acid-amido syn 77.7 1.1 3.8E-05 40.5 2.4 32 179-210 94-126 (581)
67 3tbh_A O-acetyl serine sulfhyd 77.1 16 0.00056 30.3 9.4 91 28-120 34-127 (334)
68 3tsy_A Fusion protein 4-coumar 76.9 17 0.00059 35.1 10.8 95 180-282 73-171 (979)
69 4gs5_A Acyl-COA synthetase (AM 76.2 8.5 0.00029 32.3 7.5 92 27-124 35-136 (358)
70 4eql_A 4-substituted benzoates 74.4 1.2 4.2E-05 40.2 1.9 31 180-210 90-121 (581)
71 4eez_A Alcohol dehydrogenase 1 71.4 23 0.00078 29.3 9.0 78 39-119 136-216 (348)
72 3vc3_A Beta-cyanoalnine syntha 69.9 21 0.00073 29.8 8.4 91 28-120 49-142 (344)
73 3dzz_A Putative pyridoxal 5'-p 69.9 46 0.0016 27.6 11.7 56 61-119 106-168 (391)
74 3nyq_A Malonyl-COA ligase; A/B 66.3 39 0.0013 29.6 9.9 94 27-125 153-257 (505)
75 3l8c_A D-alanine--poly(phospho 66.3 29 0.00099 30.6 9.0 78 201-279 28-109 (521)
76 1zsy_A Mitochondrial 2-enoyl t 65.7 29 0.00098 28.9 8.5 79 39-118 139-223 (357)
77 3tqh_A Quinone oxidoreductase; 65.3 24 0.00082 28.9 7.8 77 39-119 125-204 (321)
78 3jv7_A ADH-A; dehydrogenase, n 65.1 46 0.0016 27.5 9.6 78 40-120 143-225 (345)
79 3ite_A SIDN siderophore synthe 63.0 73 0.0025 28.3 11.1 97 180-279 32-134 (562)
80 3gqw_A Fatty acid AMP ligase; 62.7 47 0.0016 29.5 9.9 85 200-285 47-142 (576)
81 3b8x_A WBDK, pyridoxamine 5-ph 61.3 71 0.0024 26.6 10.6 81 60-148 76-163 (390)
82 3ju7_A Putative PLP-dependent 60.2 29 0.001 29.1 7.6 62 54-118 68-136 (377)
83 1z7w_A Cysteine synthase; tran 59.6 45 0.0015 27.4 8.4 91 28-120 29-122 (322)
84 3ri6_A O-acetylhomoserine sulf 59.4 85 0.0029 26.9 10.6 56 61-118 118-174 (430)
85 4dg8_A PA1221; ANL superfamily 59.2 78 0.0027 28.7 10.7 89 180-278 39-131 (620)
86 1h2b_A Alcohol dehydrogenase; 58.7 60 0.002 27.0 9.2 80 38-120 153-240 (359)
87 3s2e_A Zinc-containing alcohol 58.5 41 0.0014 27.7 8.1 78 38-119 138-218 (340)
88 1y7l_A O-acetylserine sulfhydr 57.8 72 0.0025 26.0 9.4 90 28-120 25-117 (316)
89 4h1h_A LMO1638 protein; MCCF-l 56.9 40 0.0014 27.9 7.6 60 60-119 8-86 (327)
90 4aec_A Cysteine synthase, mito 56.7 51 0.0017 28.5 8.5 64 56-119 165-229 (430)
91 2q3b_A Cysteine synthase A; py 56.6 61 0.0021 26.4 8.7 89 29-120 31-122 (313)
92 3fpc_A NADP-dependent alcohol 55.5 40 0.0014 27.9 7.6 77 38-118 138-218 (352)
93 3sr3_A Microcin immunity prote 55.4 43 0.0015 27.8 7.6 60 60-119 9-87 (336)
94 4eye_A Probable oxidoreductase 55.3 86 0.0029 25.8 9.6 79 38-119 130-212 (342)
95 4dq6_A Putative pyridoxal phos 55.0 86 0.0029 25.9 9.7 53 61-118 111-171 (391)
96 4ej6_A Putative zinc-binding d 54.6 44 0.0015 28.0 7.8 59 55-117 174-233 (370)
97 1ve1_A O-acetylserine sulfhydr 53.9 87 0.003 25.3 10.3 64 56-120 51-117 (304)
98 3a2b_A Serine palmitoyltransfe 53.5 97 0.0033 25.8 10.6 55 61-119 124-181 (398)
99 2jwk_A Protein TOLR; periplasm 53.1 25 0.00084 21.4 4.5 33 18-50 34-66 (74)
100 3l6b_A Serine racemase; pyrido 53.1 37 0.0013 28.3 6.9 58 64-122 76-133 (346)
101 3uog_A Alcohol dehydrogenase; 53.0 98 0.0034 25.7 9.7 76 38-117 160-239 (363)
102 3krt_A Crotonyl COA reductase; 53.0 46 0.0016 28.9 7.8 79 38-119 197-281 (456)
103 3nra_A Aspartate aminotransfer 52.9 99 0.0034 25.7 12.0 53 61-117 123-185 (407)
104 3two_A Mannitol dehydrogenase; 52.0 54 0.0018 27.1 7.8 75 38-116 148-225 (348)
105 2pqm_A Cysteine synthase; OASS 51.9 71 0.0024 26.5 8.5 89 29-120 42-133 (343)
106 3tla_A MCCF; serine protease, 51.9 50 0.0017 27.9 7.5 60 60-119 39-117 (371)
107 4b7c_A Probable oxidoreductase 51.2 66 0.0022 26.3 8.2 60 57-118 143-202 (336)
108 1gu7_A Enoyl-[acyl-carrier-pro 50.9 42 0.0014 28.0 7.0 79 39-118 138-223 (364)
109 3i16_A Aluminum resistance pro 50.8 1.1E+02 0.0039 26.2 9.8 59 61-119 112-184 (427)
110 2e7j_A SEP-tRNA:Cys-tRNA synth 50.4 1E+02 0.0035 25.2 9.6 56 61-119 90-155 (371)
111 2egu_A Cysteine synthase; O-ac 50.2 72 0.0025 25.9 8.2 90 28-120 28-120 (308)
112 4dup_A Quinone oxidoreductase; 50.0 76 0.0026 26.3 8.5 78 38-118 138-219 (353)
113 3ist_A Glutamate racemase; str 50.0 73 0.0025 25.5 7.9 57 18-78 19-81 (269)
114 1c7n_A Cystalysin; transferase 49.5 1.1E+02 0.0038 25.3 10.1 54 62-118 111-171 (399)
115 1eg5_A Aminotransferase; PLP-d 49.5 81 0.0028 25.9 8.7 57 61-118 86-146 (384)
116 4e5s_A MCCFLIKE protein (BA_56 49.3 52 0.0018 27.3 7.1 60 60-119 8-86 (331)
117 3hh8_A Metal ABC transporter s 49.1 1E+02 0.0036 24.9 9.5 83 41-125 157-246 (294)
118 2cvh_A DNA repair and recombin 49.0 81 0.0028 23.6 8.7 51 60-111 16-70 (220)
119 3qwb_A Probable quinone oxidor 49.0 1.1E+02 0.0037 25.0 9.7 57 59-118 144-200 (334)
120 4a2c_A Galactitol-1-phosphate 48.7 1E+02 0.0035 25.2 9.1 63 54-120 151-214 (346)
121 3kax_A Aminotransferase, class 48.4 1.1E+02 0.0039 25.1 9.9 54 61-118 103-163 (383)
122 1o69_A Aminotransferase; struc 48.4 71 0.0024 26.7 8.2 61 56-119 64-130 (394)
123 3op7_A Aminotransferase class 47.7 86 0.0029 25.8 8.5 54 61-118 102-161 (375)
124 3mfq_A TROA, high-affinity zin 46.5 68 0.0023 25.8 7.3 85 41-127 137-228 (282)
125 2c81_A Glutamine-2-deoxy-scyll 46.4 67 0.0023 27.1 7.7 59 56-118 74-137 (418)
126 3pc3_A CG1753, isoform A; CBS, 46.4 87 0.003 27.8 8.6 62 57-119 105-167 (527)
127 2jtq_A Phage shock protein E; 46.2 51 0.0017 20.5 5.4 46 38-90 22-67 (85)
128 3goh_A Alcohol dehydrogenase, 46.1 86 0.0029 25.4 8.1 74 38-116 114-190 (315)
129 1d2f_A MALY protein; aminotran 45.8 1.3E+02 0.0044 24.9 10.5 55 61-118 108-169 (390)
130 3ndn_A O-succinylhomoserine su 45.7 1.4E+02 0.0048 25.3 10.2 56 61-118 117-173 (414)
131 3ip1_A Alcohol dehydrogenase, 45.6 1.2E+02 0.004 25.7 9.1 55 60-118 210-265 (404)
132 4a0s_A Octenoyl-COA reductase/ 45.1 59 0.002 28.0 7.2 77 38-117 189-271 (447)
133 1mdo_A ARNB aminotransferase; 45.0 69 0.0024 26.6 7.5 59 56-118 71-134 (393)
134 2v03_A Cysteine synthase B; py 44.3 1.2E+02 0.0043 24.4 10.5 89 29-120 25-116 (303)
135 1pl8_A Human sorbitol dehydrog 44.2 80 0.0027 26.1 7.7 76 38-118 144-223 (356)
136 1kol_A Formaldehyde dehydrogen 44.1 1.4E+02 0.0049 25.0 9.6 55 56-114 178-233 (398)
137 3dwg_A Cysteine synthase B; su 44.1 1.1E+02 0.0038 25.0 8.5 64 56-120 64-128 (325)
138 3uko_A Alcohol dehydrogenase c 44.0 78 0.0027 26.5 7.7 78 38-119 164-246 (378)
139 3euc_A Histidinol-phosphate am 43.9 1.2E+02 0.0041 24.8 8.8 55 61-118 106-164 (367)
140 3jzl_A Putative cystathionine 43.9 1.5E+02 0.0051 25.2 9.4 58 61-119 98-167 (409)
141 1e3j_A NADP(H)-dependent ketos 43.3 1.4E+02 0.0047 24.6 9.0 75 38-117 141-218 (352)
142 4eb5_A Probable cysteine desul 43.1 57 0.0019 26.9 6.7 57 62-119 86-146 (382)
143 2cb1_A O-acetyl homoserine sul 42.8 1.2E+02 0.004 25.7 8.7 55 61-118 92-147 (412)
144 3hvy_A Cystathionine beta-lyas 42.6 1.6E+02 0.0055 25.2 10.7 58 61-119 113-184 (427)
145 3jyn_A Quinone oxidoreductase; 42.3 1.4E+02 0.0047 24.3 9.4 78 38-118 111-192 (325)
146 3ht4_A Aluminum resistance pro 42.1 1.1E+02 0.0038 26.2 8.5 62 56-119 100-173 (431)
147 3ijw_A Aminoglycoside N3-acety 42.0 19 0.00066 28.9 3.2 46 50-95 18-73 (268)
148 1piw_A Hypothetical zinc-type 41.8 47 0.0016 27.6 5.9 76 38-117 151-229 (360)
149 3ss7_X D-serine dehydratase; t 41.7 1.3E+02 0.0043 26.1 8.7 100 29-128 101-223 (442)
150 1rjw_A ADH-HT, alcohol dehydro 41.6 86 0.0029 25.7 7.4 76 38-117 136-214 (339)
151 3isl_A Purine catabolism prote 41.5 1E+02 0.0035 25.7 8.1 20 99-118 124-143 (416)
152 1uuf_A YAHK, zinc-type alcohol 41.3 74 0.0025 26.6 7.0 77 38-118 165-245 (369)
153 4h27_A L-serine dehydratase/L- 41.1 74 0.0025 26.7 7.0 54 71-124 99-152 (364)
154 3gaz_A Alcohol dehydrogenase s 41.1 1.1E+02 0.0038 25.1 8.1 73 38-114 121-197 (343)
155 1toa_A Tromp-1, protein (perip 40.5 98 0.0034 25.3 7.5 87 41-129 171-264 (313)
156 3zrp_A Serine-pyruvate aminotr 40.3 1.3E+02 0.0046 24.5 8.6 58 61-119 74-135 (384)
157 2nyg_A YOKD protein; PFAM02522 40.2 21 0.00073 28.7 3.2 23 51-73 17-39 (273)
158 2dph_A Formaldehyde dismutase; 40.1 1.1E+02 0.0039 25.7 8.2 55 55-113 177-232 (398)
159 1vj0_A Alcohol dehydrogenase, 40.1 98 0.0033 25.9 7.7 77 38-118 166-247 (380)
160 4hvk_A Probable cysteine desul 40.0 61 0.0021 26.6 6.4 57 62-119 86-146 (382)
161 2z9v_A Aspartate aminotransfer 39.9 97 0.0033 25.6 7.7 57 61-118 80-141 (392)
162 3sma_A FRBF; N-acetyl transfer 39.7 22 0.00075 28.8 3.2 50 38-94 20-79 (286)
163 3l8a_A METC, putative aminotra 39.5 1.6E+02 0.0053 24.8 9.0 55 61-118 140-201 (421)
164 1elu_A L-cysteine/L-cystine C- 39.0 98 0.0034 25.5 7.5 18 61-78 98-115 (390)
165 1yb5_A Quinone oxidoreductase; 38.4 1.7E+02 0.0057 24.1 8.8 76 39-117 142-221 (351)
166 3fvs_A Kynurenine--oxoglutarat 37.8 1.8E+02 0.0061 24.3 10.0 22 193-214 250-271 (422)
167 2rkb_A Serine dehydratase-like 37.7 94 0.0032 25.3 7.0 59 64-123 54-112 (318)
168 2j8z_A Quinone oxidoreductase; 37.5 1.3E+02 0.0044 24.9 7.9 77 38-117 133-213 (354)
169 2z61_A Probable aspartate amin 37.3 1.2E+02 0.0041 24.8 7.8 52 61-118 110-161 (370)
170 1jvb_A NAD(H)-dependent alcoho 37.3 1.5E+02 0.0051 24.3 8.3 77 38-117 142-222 (347)
171 2pfu_A Biopolymer transport EX 37.1 56 0.0019 21.2 4.6 11 64-74 57-67 (99)
172 1o58_A O-acetylserine sulfhydr 37.0 1.6E+02 0.0056 23.6 9.2 62 56-120 58-120 (303)
173 3ujp_A Mn transporter subunit; 36.9 88 0.003 25.5 6.6 82 41-124 164-252 (307)
174 2h6e_A ADH-4, D-arabinose 1-de 36.4 1.2E+02 0.004 25.0 7.4 54 60-117 168-222 (344)
175 1xvl_A Mn transporter, MNTC pr 36.1 1.1E+02 0.0037 25.2 7.0 86 41-128 178-270 (321)
176 1f8f_A Benzyl alcohol dehydrog 35.2 1.8E+02 0.0062 24.0 8.6 58 57-118 184-242 (371)
177 3gms_A Putative NADPH:quinone 35.2 1.1E+02 0.0036 25.1 7.0 77 38-118 115-196 (340)
178 3uhf_A Glutamate racemase; str 35.1 1.1E+02 0.0037 24.6 6.7 57 18-78 38-100 (274)
179 2cf5_A Atccad5, CAD, cinnamyl 35.0 95 0.0032 25.7 6.7 79 38-119 151-233 (357)
180 2ch1_A 3-hydroxykynurenine tra 34.8 1.4E+02 0.0049 24.6 7.9 55 62-117 91-149 (396)
181 3lvm_A Cysteine desulfurase; s 34.8 2E+02 0.0068 24.0 9.4 57 62-119 111-171 (423)
182 1e5e_A MGL, methionine gamma-l 34.7 1.3E+02 0.0044 25.4 7.6 56 61-118 98-154 (404)
183 1qor_A Quinone oxidoreductase; 34.7 1.8E+02 0.0062 23.5 8.8 76 39-117 112-191 (327)
184 4d9i_A Diaminopropionate ammon 34.6 2.1E+02 0.0071 24.2 9.8 54 71-124 118-171 (398)
185 1kmj_A Selenocysteine lyase; p 34.6 1.1E+02 0.0038 25.3 7.2 58 61-119 110-172 (406)
186 2vsq_A Surfactin synthetase su 34.4 1.7E+02 0.0058 29.3 9.3 80 201-281 488-571 (1304)
187 1yqd_A Sinapyl alcohol dehydro 34.4 1.3E+02 0.0045 24.9 7.5 62 55-119 178-240 (366)
188 2o1e_A YCDH; alpha-beta protei 34.4 1.5E+02 0.0052 24.1 7.7 86 41-128 166-256 (312)
189 2oga_A Transaminase; PLP-depen 34.4 1.2E+02 0.0041 25.3 7.4 59 56-118 95-158 (399)
190 1b9h_A AHBA synthase, protein 34.3 1.2E+02 0.0042 25.0 7.4 58 56-117 70-132 (388)
191 1p0f_A NADP-dependent alcohol 34.2 1.3E+02 0.0045 25.0 7.5 57 58-118 186-243 (373)
192 1y80_A Predicted cobalamin bin 34.0 1.5E+02 0.0051 22.3 8.7 55 66-120 90-148 (210)
193 1t3i_A Probable cysteine desul 33.9 1.1E+02 0.0036 25.6 7.0 57 61-118 115-176 (420)
194 2eih_A Alcohol dehydrogenase; 33.8 1.6E+02 0.0054 24.1 7.9 75 38-116 137-216 (343)
195 1p5j_A L-serine dehydratase; l 33.3 1.1E+02 0.0039 25.6 6.9 59 64-123 93-151 (372)
196 3aey_A Threonine synthase; PLP 33.0 1E+02 0.0035 25.5 6.6 55 69-123 81-136 (351)
197 4dvj_A Putative zinc-dependent 32.8 1.7E+02 0.0058 24.3 7.9 80 38-120 137-226 (363)
198 2d1f_A Threonine synthase; ami 32.6 1.2E+02 0.0042 25.2 7.0 53 71-123 91-144 (360)
199 3cq5_A Histidinol-phosphate am 32.6 1.7E+02 0.0058 23.9 8.0 54 62-118 114-171 (369)
200 3gi1_A LBP, laminin-binding pr 32.5 1.6E+02 0.0055 23.6 7.4 84 41-128 155-245 (286)
201 2dr1_A PH1308 protein, 386AA l 32.4 2E+02 0.007 23.4 9.4 93 49-147 81-183 (386)
202 2bkw_A Alanine-glyoxylate amin 32.3 2E+02 0.0069 23.4 8.5 56 62-118 84-144 (385)
203 3bb8_A CDP-4-keto-6-deoxy-D-gl 32.3 1.3E+02 0.0044 25.5 7.3 53 61-117 107-164 (437)
204 3kgw_A Alanine-glyoxylate amin 32.2 1.4E+02 0.0047 24.5 7.4 69 49-119 84-156 (393)
205 1e3i_A Alcohol dehydrogenase, 32.2 1.5E+02 0.0052 24.6 7.6 77 38-118 166-247 (376)
206 3t18_A Aminotransferase class 32.1 2E+02 0.007 23.9 8.5 55 61-118 122-185 (413)
207 3ffy_A Putative tetrapyrrole ( 32.1 13 0.00045 25.4 0.7 54 12-73 51-113 (115)
208 3nnk_A Ureidoglycine-glyoxylat 32.0 1.8E+02 0.0062 24.0 8.2 20 99-118 126-145 (411)
209 2ayi_A Aminopeptidase T; metal 31.6 87 0.003 26.8 5.9 50 45-94 4-57 (408)
210 1pq4_A Periplasmic binding pro 31.1 1.3E+02 0.0043 24.3 6.6 85 41-129 166-255 (291)
211 2d8a_A PH0655, probable L-thre 30.9 1.3E+02 0.0045 24.6 6.9 74 38-117 141-218 (348)
212 2l66_A SSO7C4, transcriptional 30.7 59 0.002 18.4 3.3 19 56-74 21-39 (53)
213 3cog_A Cystathionine gamma-lya 30.7 2.4E+02 0.0082 23.7 10.8 56 61-118 102-158 (403)
214 2ctz_A O-acetyl-L-homoserine s 30.6 2.2E+02 0.0075 24.0 8.4 57 61-119 94-152 (421)
215 3vax_A Putative uncharacterize 30.5 1.2E+02 0.0042 25.0 6.8 57 62-119 106-167 (400)
216 1pqw_A Polyketide synthase; ro 30.5 1.6E+02 0.0055 21.6 8.2 74 39-116 10-88 (198)
217 1iz0_A Quinone oxidoreductase; 30.4 86 0.0029 25.2 5.6 76 39-117 98-176 (302)
218 2rfv_A Methionine gamma-lyase; 30.3 2.3E+02 0.008 23.5 8.5 56 61-118 100-156 (398)
219 3rq1_A Aminotransferase class 30.0 2.4E+02 0.0081 23.5 8.6 55 61-118 123-186 (418)
220 1cdo_A Alcohol dehydrogenase; 29.9 1.8E+02 0.0062 24.1 7.7 77 38-118 163-244 (374)
221 1vjo_A Alanine--glyoxylate ami 29.9 1.9E+02 0.0066 23.7 7.9 69 49-119 95-167 (393)
222 2zsj_A Threonine synthase; PLP 29.8 1.2E+02 0.004 25.2 6.4 55 69-123 83-138 (352)
223 3frk_A QDTB; aminotransferase, 29.8 54 0.0019 27.1 4.4 62 53-118 65-131 (373)
224 2d59_A Hypothetical protein PH 29.5 1.1E+02 0.0037 21.6 5.3 26 10-37 6-31 (144)
225 2huf_A Alanine glyoxylate amin 29.4 2E+02 0.0068 23.6 7.9 14 200-213 215-228 (393)
226 3nvb_A Uncharacterized protein 29.3 2.2E+02 0.0076 24.1 7.9 78 43-124 255-341 (387)
227 1oft_A SULA, hypothetical prot 29.1 1.7E+02 0.0057 21.3 6.3 67 52-120 62-134 (161)
228 1e0c_A Rhodanese, sulfurtransf 29.0 81 0.0028 24.9 5.1 41 50-90 67-108 (271)
229 3e19_A FEOA; transcriptional r 28.9 58 0.002 20.0 3.4 23 50-72 25-47 (77)
230 3out_A Glutamate racemase; str 28.9 2.2E+02 0.0075 22.6 7.7 56 18-77 21-82 (268)
231 3d1p_A Putative thiosulfate su 28.8 1E+02 0.0035 21.3 5.1 53 38-90 61-117 (139)
232 3e2y_A Kynurenine-oxoglutarate 28.8 2.5E+02 0.0085 23.2 10.0 23 193-215 243-265 (410)
233 1uar_A Rhodanese; sulfurtransf 28.8 76 0.0026 25.2 4.9 41 50-90 219-260 (285)
234 2duw_A Putative COA-binding pr 28.7 1.1E+02 0.0037 21.6 5.2 10 27-36 12-21 (145)
235 3gqv_A Enoyl reductase; medium 28.4 1.3E+02 0.0044 25.1 6.4 53 62-119 163-216 (371)
236 1gd9_A Aspartate aminotransfer 28.3 2.5E+02 0.0085 23.0 8.6 20 195-214 238-257 (389)
237 1zl0_A Hypothetical protein PA 28.2 1.7E+02 0.0058 23.9 6.9 60 60-119 13-88 (311)
238 1ofu_X SULA, hypothetical prot 28.1 1.5E+02 0.005 20.3 6.8 35 54-88 48-82 (119)
239 3aow_A Putative uncharacterize 28.1 2.8E+02 0.0096 23.6 12.7 53 61-116 161-221 (448)
240 1urh_A 3-mercaptopyruvate sulf 28.0 79 0.0027 25.1 4.9 40 50-89 72-112 (280)
241 3cai_A Possible aminotransfera 27.6 1.1E+02 0.0038 25.4 6.0 17 259-275 346-362 (406)
242 3ele_A Amino transferase; RER0 27.5 2.6E+02 0.0088 23.0 9.7 54 61-118 120-179 (398)
243 2gzm_A Glutamate racemase; enz 27.4 2.3E+02 0.0078 22.4 7.9 57 17-77 16-78 (267)
244 4df3_A Fibrillarin-like rRNA/T 27.4 1.3E+02 0.0045 23.4 5.8 56 50-108 64-120 (233)
245 1j32_A Aspartate aminotransfer 27.4 2.5E+02 0.0087 23.0 8.2 53 61-117 111-169 (388)
246 3kki_A CAI-1 autoinducer synth 27.4 1.9E+02 0.0065 24.1 7.5 55 61-119 140-194 (409)
247 2j3h_A NADP-dependent oxidored 27.2 2.5E+02 0.0086 22.8 8.7 58 58-117 150-207 (345)
248 2hcy_A Alcohol dehydrogenase 1 26.8 2.6E+02 0.0089 22.8 9.5 75 39-116 142-219 (347)
249 2vn8_A Reticulon-4-interacting 26.7 1.9E+02 0.0067 23.9 7.3 53 61-118 181-234 (375)
250 2jhf_A Alcohol dehydrogenase E 26.6 2.2E+02 0.0074 23.6 7.6 77 38-118 162-243 (374)
251 2yxb_A Coenzyme B12-dependent 26.5 1.7E+02 0.0057 21.1 6.0 72 207-278 2-76 (161)
252 3n75_A LDC, lysine decarboxyla 26.5 2.1E+02 0.0071 26.6 7.8 56 61-119 232-306 (715)
253 2fzw_A Alcohol dehydrogenase c 26.4 1.9E+02 0.0065 23.9 7.2 77 38-118 161-242 (373)
254 1zjc_A Aminopeptidase AMPS; me 26.4 99 0.0034 26.6 5.3 49 45-93 7-59 (418)
255 1e0c_A Rhodanese, sulfurtransf 26.4 95 0.0032 24.4 5.1 52 39-90 192-249 (271)
256 3f9t_A TDC, L-tyrosine decarbo 26.1 2.7E+02 0.0091 22.7 8.8 53 62-117 121-177 (397)
257 1y81_A Conserved hypothetical 26.1 1.3E+02 0.0044 21.1 5.1 48 65-113 71-118 (138)
258 1wly_A CAAR, 2-haloacrylate re 26.0 1.8E+02 0.006 23.7 6.8 74 39-116 115-195 (333)
259 2prs_A High-affinity zinc upta 26.0 1.6E+02 0.0053 23.6 6.3 83 42-128 151-240 (284)
260 3mhx_A Putative ferrous iron t 25.9 71 0.0024 20.2 3.4 22 51-72 26-47 (85)
261 2zb4_A Prostaglandin reductase 25.8 2.4E+02 0.0083 23.1 7.7 59 57-117 152-213 (357)
262 1zuw_A Glutamate racemase 1; ( 25.8 2.5E+02 0.0085 22.2 8.4 57 17-77 16-79 (272)
263 1b5p_A Protein (aspartate amin 25.8 2.8E+02 0.0095 22.8 12.0 53 61-117 112-170 (385)
264 2wlr_A Putative thiosulfate su 25.7 97 0.0033 26.5 5.3 52 39-90 171-229 (423)
265 1xa0_A Putative NADPH dependen 25.5 1.9E+02 0.0064 23.4 6.9 75 39-117 118-200 (328)
266 3utn_X Thiosulfate sulfurtrans 25.5 1.3E+02 0.0043 24.9 5.7 42 49-90 98-140 (327)
267 3g0t_A Putative aminotransfera 25.4 3E+02 0.01 23.0 9.5 54 61-117 128-188 (437)
268 3ecd_A Serine hydroxymethyltra 25.3 1.9E+02 0.0066 24.0 7.1 58 61-118 115-179 (425)
269 2vyc_A Biodegradative arginine 25.3 3.8E+02 0.013 25.0 9.5 46 61-109 242-301 (755)
270 2jfq_A Glutamate racemase; cel 25.2 2.6E+02 0.009 22.3 7.8 57 17-77 35-97 (286)
271 2r2n_A Kynurenine/alpha-aminoa 25.2 3E+02 0.01 23.0 14.8 44 62-108 130-176 (425)
272 3piu_A 1-aminocyclopropane-1-c 25.1 2.5E+02 0.0086 23.6 7.9 55 61-118 132-198 (435)
273 2fsx_A RV0390, COG0607: rhodan 25.1 47 0.0016 23.5 2.7 39 51-89 67-105 (148)
274 3hzu_A Thiosulfate sulfurtrans 24.9 1.1E+02 0.0037 25.0 5.2 41 50-90 97-138 (318)
275 2o0r_A RV0858C (N-succinyldiam 24.7 3E+02 0.01 22.8 8.5 54 61-118 107-167 (411)
276 2k0z_A Uncharacterized protein 24.7 87 0.003 20.7 3.9 45 38-89 37-81 (110)
277 1tt7_A YHFP; alcohol dehydroge 24.6 1.7E+02 0.0058 23.7 6.4 75 39-117 119-201 (330)
278 3qhx_A Cystathionine gamma-syn 24.6 3E+02 0.01 22.8 8.8 56 61-118 102-158 (392)
279 3nnk_A Ureidoglycine-glyoxylat 24.6 2.9E+02 0.0099 22.7 8.1 71 48-119 47-119 (411)
280 3ly1_A Putative histidinol-pho 24.6 2.7E+02 0.0094 22.3 9.2 55 61-118 89-148 (354)
281 2c0c_A Zinc binding alcohol de 24.5 3E+02 0.01 22.7 8.1 56 59-118 159-215 (362)
282 3fbg_A Putative arginate lyase 24.5 2.9E+02 0.0098 22.5 9.4 80 38-120 115-204 (346)
283 3zq4_A Ribonuclease J 1, RNAse 24.2 2.8E+02 0.0095 24.7 8.1 67 59-125 319-396 (555)
284 2ehv_A Hypothetical protein PH 24.2 1.3E+02 0.0043 23.0 5.3 49 60-108 26-79 (251)
285 2w8t_A SPT, serine palmitoyltr 24.1 3.2E+02 0.011 22.9 10.3 55 61-119 145-202 (427)
286 2k5l_A FEOA; structure, NESG, 23.8 70 0.0024 20.0 3.0 22 51-72 23-44 (81)
287 1fc4_A 2-amino-3-ketobutyrate 23.8 2.7E+02 0.0091 23.0 7.7 54 61-118 126-184 (401)
288 2a3d_A Protein (de novo three- 23.6 80 0.0027 18.2 2.8 20 41-60 3-22 (73)
289 3m6i_A L-arabinitol 4-dehydrog 23.5 1.1E+02 0.0037 25.3 5.1 54 40-95 154-211 (363)
290 1cs1_A CGS, protein (cystathio 23.4 3.1E+02 0.011 22.5 9.4 56 61-118 88-144 (386)
291 1bw0_A TAT, protein (tyrosine 23.2 2.6E+02 0.0088 23.2 7.5 52 61-116 125-182 (416)
292 2lx9_A Ferrous iron transport 22.9 91 0.0031 19.7 3.5 21 50-70 20-40 (83)
293 2aeu_A Hypothetical protein MJ 22.9 3.2E+02 0.011 22.5 8.3 29 187-215 201-231 (374)
294 3n0l_A Serine hydroxymethyltra 22.8 1.6E+02 0.0056 24.4 6.2 59 61-119 108-172 (417)
295 1vjk_A Molybdopterin convertin 22.6 1.6E+02 0.0056 19.0 5.0 45 13-72 36-94 (98)
296 2h3j_A Hypothetical protein PA 22.6 71 0.0024 19.4 2.9 22 51-72 22-43 (75)
297 3ccd_A Phosphocarrier protein 22.6 1.5E+02 0.0052 18.7 4.8 49 16-72 18-66 (85)
298 1yfb_A Transition state regula 22.5 78 0.0027 18.6 2.8 18 56-73 31-48 (59)
299 3isl_A Purine catabolism prote 22.5 3.3E+02 0.011 22.4 8.5 74 46-120 43-118 (416)
300 1jbq_A B, cystathionine beta-s 22.3 3.7E+02 0.013 23.1 8.5 62 57-119 153-215 (435)
301 1gc0_A Methionine gamma-lyase; 22.3 3.4E+02 0.011 22.5 8.4 56 61-118 101-157 (398)
302 3ohp_A Hypoxanthine phosphorib 22.2 2.3E+02 0.008 20.7 6.1 21 39-59 8-28 (177)
303 2cqa_A RUVB-like 2; TIP48, TIP 22.2 1.2E+02 0.004 19.9 3.8 24 50-73 52-75 (95)
304 3ff4_A Uncharacterized protein 22.1 1.2E+02 0.004 20.8 4.2 48 68-115 62-109 (122)
305 3olh_A MST, 3-mercaptopyruvate 22.1 94 0.0032 25.1 4.3 52 39-90 223-280 (302)
306 3eod_A Protein HNR; response r 22.0 1.7E+02 0.006 19.1 9.4 54 64-120 7-60 (130)
307 3nyt_A Aminotransferase WBPE; 21.9 98 0.0033 25.5 4.5 63 52-118 63-130 (367)
308 3utn_X Thiosulfate sulfurtrans 21.9 1.9E+02 0.0066 23.7 6.1 39 59-97 270-308 (327)
309 3cx3_A Lipoprotein; zinc-bindi 21.8 1.5E+02 0.0052 23.7 5.4 84 41-128 153-243 (284)
310 1pff_A Methionine gamma-lyase; 21.8 2.7E+02 0.0092 22.2 7.1 56 61-118 34-90 (331)
311 3n0r_A Response regulator; sig 21.7 3E+02 0.01 21.8 8.5 81 38-121 126-215 (286)
312 2dr3_A UPF0273 protein PH0284; 21.7 1.4E+02 0.0049 22.6 5.2 54 58-111 17-74 (247)
313 3jx9_A Putative phosphoheptose 21.7 1.4E+02 0.0047 22.0 4.7 38 59-96 73-112 (170)
314 3hbm_A UDP-sugar hydrolase; PS 21.6 68 0.0023 25.8 3.3 37 86-123 45-81 (282)
315 1v3u_A Leukotriene B4 12- hydr 21.6 3.2E+02 0.011 22.0 9.0 56 58-116 140-195 (333)
316 1n0w_A DNA repair protein RAD5 21.4 1.5E+02 0.0051 22.4 5.3 53 59-111 19-83 (243)
317 2fnu_A Aminotransferase; prote 21.3 1.1E+02 0.0038 25.0 4.7 53 61-117 71-127 (375)
318 1v71_A Serine racemase, hypoth 21.3 2.6E+02 0.009 22.6 6.9 50 73-122 82-131 (323)
319 3uwc_A Nucleotide-sugar aminot 21.3 1.1E+02 0.0036 25.2 4.6 60 55-118 69-132 (374)
320 1xi9_A Putative transaminase; 21.1 2.2E+02 0.0076 23.6 6.7 54 61-118 122-181 (406)
321 2cdc_A Glucose dehydrogenase g 21.1 2.4E+02 0.0081 23.3 6.7 56 58-115 166-231 (366)
322 2x5f_A Aspartate_tyrosine_phen 21.0 3.7E+02 0.013 22.4 9.0 54 61-117 134-195 (430)
323 1wkv_A Cysteine synthase; homo 20.9 3.7E+02 0.013 22.7 7.8 56 62-118 143-199 (389)
324 3aay_A Putative thiosulfate su 20.8 1.1E+02 0.0037 24.2 4.3 40 51-90 213-253 (277)
325 2d00_A V-type ATP synthase sub 20.6 2E+02 0.0068 19.2 5.0 78 66-149 5-83 (109)
326 2jfz_A Glutamate racemase; cel 20.5 2.5E+02 0.0087 21.9 6.4 55 18-76 14-74 (255)
327 1jg8_A L-ALLO-threonine aldola 20.5 84 0.0029 25.5 3.8 57 61-118 74-139 (347)
328 3tqx_A 2-amino-3-ketobutyrate 20.5 2.3E+02 0.0078 23.3 6.6 55 61-119 124-183 (399)
329 1urh_A 3-mercaptopyruvate sulf 20.3 1.3E+02 0.0043 23.9 4.7 52 39-90 200-256 (280)
330 1o4s_A Aspartate aminotransfer 20.3 2.2E+02 0.0075 23.5 6.4 54 61-118 122-181 (389)
331 2a7v_A Serine hydroxymethyltra 20.2 1.4E+02 0.005 26.1 5.3 23 97-119 189-211 (490)
332 1iay_A ACC synthase 2, 1-amino 20.2 3.8E+02 0.013 22.3 10.0 55 62-118 130-195 (428)
333 2gcx_A FEOA, ferrous iron tran 20.2 62 0.0021 19.8 2.2 23 50-72 20-42 (75)
334 1kkl_H Phosphocarrier protein 20.2 2E+02 0.0067 19.0 6.7 49 16-72 30-78 (100)
335 2vvt_A Glutamate racemase; iso 20.0 3.4E+02 0.012 21.7 8.2 58 16-77 36-99 (290)
No 1
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=9.3e-45 Score=331.74 Aligned_cols=269 Identities=22% Similarity=0.254 Sum_probs=234.1
Q ss_pred cccCCCCCCCCHHHHHHHHhhhcCCccEEEECC--------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH
Q 046637 5 IRCSANYVPLTPISFLERSAVVYRDRPSVVYGD--------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA 76 (301)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~--------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~ 76 (301)
+.++.+++.+++.++|++.++++||++|+++.+ +++||+||.++++++|..|.+.|+++||+|+++++|+++
T Consensus 10 ~~p~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 89 (549)
T 3g7s_A 10 GFPSLYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSID 89 (549)
T ss_dssp CCCCCCCCCCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH
T ss_pred CCCCCCcCCCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH
Confidence 344567789999999999999999999999977 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccc
Q 046637 77 MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVA 156 (301)
Q Consensus 77 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 156 (301)
+++++|||+++|++++|++|.++.+++.+++++++++++|++......+....... .++.++..+..
T Consensus 90 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------- 156 (549)
T 3g7s_A 90 YVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT-----GVERVFVVGGE-------- 156 (549)
T ss_dssp HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS-----CCCEEEEETCS--------
T ss_pred HHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC-----CCcEEEEeCCC--------
Confidence 99999999999999999999999999999999999999999988776665554332 34555554422
Q ss_pred cCCCCccHHHHHhhccccccCCCCCC-CCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchh
Q 046637 157 SSSGNLEYESLLAIGKLREVRRPKDE-CDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFH 235 (301)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h 235 (301)
...+.++..............+ +++++|+|||||||.||||+++|.++..++......+++.++|++++.+|++|
T Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 232 (549)
T 3g7s_A 157 ----VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFH 232 (549)
T ss_dssp ----SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTS
T ss_pred ----CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHH
Confidence 1456666655444322222333 89999999999999999999999999999998888899999999999999999
Q ss_pred hhhhHHHHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCC
Q 046637 236 CNGWCLTWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPP 290 (301)
Q Consensus 236 ~~g~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 290 (301)
.+|+...+.++..|+++++.+.+++..+++.++++++|+++++|++++.|++.+.
T Consensus 233 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 287 (549)
T 3g7s_A 233 SAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLE 287 (549)
T ss_dssp HHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhh
Confidence 9998888888999999999999999999999999999999999999999987644
No 2
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=2.5e-44 Score=326.13 Aligned_cols=264 Identities=20% Similarity=0.287 Sum_probs=225.3
Q ss_pred CCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 10 NYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
.+.++++.++|++.++++||++|+++.++++||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 2 s~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga 81 (509)
T 3ivr_A 2 SLHDFTLADVYRRNAALFPDRTAFMVDGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGA 81 (509)
T ss_dssp CTTCCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTC
T ss_pred CCCcCCHHHHHHHHHHHCCCceEEEECCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHh
Q 046637 90 VLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLA 169 (301)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (301)
+++|++|.++.+++.+++++++++++|++......+........ .+..++.+++... .+.++..
T Consensus 82 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~------------~~~~~~~ 145 (509)
T 3ivr_A 82 ILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLG----GVKKAYAIGDGSG------------PFAPFKD 145 (509)
T ss_dssp EEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCS----SCCEEEESSCCCS------------SCEEGGG
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccC----CceEEEEcCCCCc------------ChhhHhh
Confidence 99999999999999999999999999999887765444433332 5566666654221 1111111
Q ss_pred -hccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHh
Q 046637 170 -IGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQ 248 (301)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~ 248 (301)
............++++++|+|||||||.||||++||.++..........+++.++|++++.+|++|.+|+...+.++..
T Consensus 146 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~ 225 (509)
T 3ivr_A 146 LASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQA 225 (509)
T ss_dssp TCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHh
Confidence 1111122334678899999999999999999999999999999988888999999999999999999999887777777
Q ss_pred CCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 249 GGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 249 g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
|++.++...+++..+++.++++++|+++++|+++..|++..
T Consensus 226 ~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 266 (509)
T 3ivr_A 226 GGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA 266 (509)
T ss_dssp TCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC
T ss_pred CCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc
Confidence 77777777899999999999999999999999999999876
No 3
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.4e-44 Score=328.19 Aligned_cols=274 Identities=23% Similarity=0.237 Sum_probs=229.6
Q ss_pred CCCCCCCCHHHHHHHHhhhcCCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhh
Q 046637 8 SANYVPLTPISFLERSAVVYRDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVP 85 (301)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~ 85 (301)
.......++.++|+++++++|+++|+++.++ ++||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+
T Consensus 10 ~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~ 89 (517)
T 3r44_A 10 DDDDKMKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYGAA 89 (517)
T ss_dssp --CGGGGCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHHHH
Confidence 3344588999999999999999999999776 99999999999999999999999999999999999999999999999
Q ss_pred hccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHH
Q 046637 86 MAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYE 165 (301)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (301)
++|++++|++|.++.+++.+++++++++++|++......+........ ....++..... ..+.
T Consensus 90 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------~~~~ 152 (517)
T 3r44_A 90 KLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQAD----PPGTVTDWIGA-------------DSLA 152 (517)
T ss_dssp HHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSS----CCTTCCEEEEH-------------HHHH
T ss_pred HhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccC----CccEEEEccCc-------------ccHH
Confidence 999999999999999999999999999999999887766665544332 22222221110 2344
Q ss_pred HHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHH
Q 046637 166 SLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAV 245 (301)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~ 245 (301)
+...............++++++|+|||||||.||||++||.++..++......+++..+|++++.+|++|.+|+...+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~ 232 (517)
T 3r44_A 153 ERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFS 232 (517)
T ss_dssp HHHHHCCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHH
T ss_pred HHhhccCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHH
Confidence 44444433334445678999999999999999999999999999999988888899999999999999999998876666
Q ss_pred HHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 246 AAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 246 l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
++.|+++++.+.+++..+++.++++++|++.++|++++.|.+.+.....++++
T Consensus 233 ~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 285 (517)
T 3r44_A 233 AMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPD 285 (517)
T ss_dssp HHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTT
T ss_pred HhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCc
Confidence 66999999999999999999999999999999999999999876655555443
No 4
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=2.2e-44 Score=328.48 Aligned_cols=272 Identities=21% Similarity=0.244 Sum_probs=226.9
Q ss_pred CCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 10 NYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
.+...++.++|++.++++||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 21 ~~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga 100 (539)
T 1mdb_A 21 CWAGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGA 100 (539)
T ss_dssp SSCSCCHHHHHHHHHHHHTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTC
T ss_pred cccCCCHHHHHHHHHHHCCCCEEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCe
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHHHHHHhcCceEEEEcCCchh-----hHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccH
Q 046637 90 VLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLP-----IAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEY 164 (301)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (301)
+++|++|.++.+++.++++.++++++|+++.... .........+ .++.++..++.. .+
T Consensus 101 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-------------~~ 163 (539)
T 1mdb_A 101 LPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLP----TLKNIIVAGEAE-------------EF 163 (539)
T ss_dssp EEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCT----TCCCEEEESCCT-------------TS
T ss_pred EEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCC----CccEEEEcCCcc-------------ch
Confidence 9999999999999999999999999999876432 2223333222 455555544321 01
Q ss_pred HHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH--H
Q 046637 165 ESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL--T 242 (301)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~--~ 242 (301)
.++..............++++++|+|||||||.||||++||.++..++......+++.++|++++.+|++|.+|+.. +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~ 243 (539)
T 1mdb_A 164 LPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGV 243 (539)
T ss_dssp EEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHH
T ss_pred hhhhhccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHH
Confidence 11111111111123456789999999999999999999999999998888888888999999999999999999874 7
Q ss_pred HHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 243 WAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 243 ~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
+.++..|+++++.+.+++..+++.++++++|++.++|++++.|++.......++++
T Consensus 244 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 299 (539)
T 1mdb_A 244 LGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSS 299 (539)
T ss_dssp HHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTT
T ss_pred HHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccc
Confidence 88999999999999999999999999999999999999999998765444444443
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=7e-44 Score=325.53 Aligned_cols=275 Identities=16% Similarity=0.206 Sum_probs=231.5
Q ss_pred CCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 10 NYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
.|.++++.++|++.++++||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 26 ~~~~~tl~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Ga 105 (544)
T 3o83_A 26 YWIDQPLTRILTVGVQSHPHSLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGV 105 (544)
T ss_dssp SCCCCCTTHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHhCCCceEEEcCCCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHHHHHHhcCceEEEEcCCch-----hhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccH
Q 046637 90 VLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLL-----PIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEY 164 (301)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (301)
+++|+++.++.+++.+++++++++++|++.... ........... ....++.++.... ...+
T Consensus 106 v~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~~~~ 171 (544)
T 3o83_A 106 VVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNL----SPEIILMLNHQAT----------DFGL 171 (544)
T ss_dssp EEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTC----CCSEEEEETCCTT----------SEEH
T ss_pred EEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhccc----CcceEEEecCCcc----------ccch
Confidence 999999999999999999999999999987654 22333332222 3455555443211 1234
Q ss_pred HHHHhhcccc-ccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH--
Q 046637 165 ESLLAIGKLR-EVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL-- 241 (301)
Q Consensus 165 ~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-- 241 (301)
.++....... .......++++++|+|||||||.||||++||.++..++......+++.++|++++.+|++|.+++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~ 251 (544)
T 3o83_A 172 LDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLSSPG 251 (544)
T ss_dssp HHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHSSH
T ss_pred hhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecchHH
Confidence 4444433222 1223466889999999999999999999999999999999888899999999999999999999874
Q ss_pred HHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 242 TWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 242 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.......++++
T Consensus 252 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 308 (544)
T 3o83_A 252 ALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQS 308 (544)
T ss_dssp HHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTT
T ss_pred HHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCc
Confidence 788899999999999999999999999999999999999999999876665555544
No 6
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=5.3e-44 Score=326.83 Aligned_cols=282 Identities=16% Similarity=0.130 Sum_probs=235.3
Q ss_pred cCCCCCCCCHHHHHHHHhhhcCCccEEE---E--CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHH
Q 046637 7 CSANYVPLTPISFLERSAVVYRDRPSVV---Y--GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELH 81 (301)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~al~---~--~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~ 81 (301)
.+.++++.++.++|.+.++++|+++|++ + .++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~~~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 92 (550)
T 3rix_A 13 PFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPV 92 (550)
T ss_dssp CSSCCCCSCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHH
Confidence 4667778999999999999999999976 4 3579999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCC
Q 046637 82 FGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGN 161 (301)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (301)
|||+++|++++|++|.++.+++.++++.++++++|++.+....+.......+ .++.++.++.... ..+.
T Consensus 93 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~ 161 (550)
T 3rix_A 93 LGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLP----IIQKIIIMDSKTD-------YQGF 161 (550)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCT----TCCEEEETTCSSC-------BTTB
T ss_pred HHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCC----CcceEEEEcCCcc-------ccCc
Confidence 9999999999999999999999999999999999999988777777666555 5677777665422 1233
Q ss_pred ccHHHHHhhcccc-------ccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hhCCCCCEEEEec
Q 046637 162 LEYESLLAIGKLR-------EVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF---NEMGLMPTYLWCV 231 (301)
Q Consensus 162 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~ 231 (301)
..+.++....... .......++++++|+|||||||.||||++||.++.......... +++.+++++++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 241 (550)
T 3rix_A 162 QSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVV 241 (550)
T ss_dssp CBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECS
T ss_pred ccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEec
Confidence 5566665443321 11122345789999999999999999999999998877665544 4677899999999
Q ss_pred cchhhhhhHHHHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccCC
Q 046637 232 PMFHCNGWCLTWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRGR 299 (301)
Q Consensus 232 p~~h~~g~~~~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~~ 299 (301)
|++|.+|+...+.++..|+++++.+.+++..+++.++++++|+++++|++++.|++.+...+.++++.
T Consensus 242 p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l 309 (550)
T 3rix_A 242 PFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNL 309 (550)
T ss_dssp CTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTC
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccc
Confidence 99999999888889999999999999999999999999999999999999999999887777666543
No 7
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1.3e-43 Score=323.19 Aligned_cols=277 Identities=21% Similarity=0.265 Sum_probs=236.2
Q ss_pred CCCCC-CCCHHHHHHHHhhhcCCccEEEEC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHh
Q 046637 8 SANYV-PLTPISFLERSAVVYRDRPSVVYG--DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGV 84 (301)
Q Consensus 8 ~~~~~-~~~~~~~l~~~~~~~~~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~ 84 (301)
+.+.+ .+++.++|.++++++||++|+++. ++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||
T Consensus 15 ~~~~p~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~ 94 (536)
T 3ni2_A 15 DIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGA 94 (536)
T ss_dssp CCCCCSSCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 33444 589999999999999999999995 579999999999999999999999999999999999999999999999
Q ss_pred hhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccH
Q 046637 85 PMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEY 164 (301)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (301)
+++|++++|++|.++.+++.+++++++++++|++......+.+...... . .++.++... .+...+
T Consensus 95 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~---------~~~~~~ 159 (536)
T 3ni2_A 95 SHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARESD-----V-KVMCVDSAP---------DGCLHF 159 (536)
T ss_dssp HHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHHT-----C-EEEESSCCC---------TTCEET
T ss_pred HHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhcC-----c-eEEEecCCC---------CCccCH
Confidence 9999999999999999999999999999999999887777666554322 2 344444321 233566
Q ss_pred HHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhhCCCCCEEEEeccchhhhhhH
Q 046637 165 ESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAAL----FNEMGLMPTYLWCVPMFHCNGWC 240 (301)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~ 240 (301)
.++..............++++++|+|||||||.||||++||.+++..+..... .+.+.++|++++.+|++|.+|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~ 239 (536)
T 3ni2_A 160 SELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALN 239 (536)
T ss_dssp HHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHH
T ss_pred HHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHH
Confidence 66665544433444567899999999999999999999999999887766543 34577899999999999999986
Q ss_pred H-HHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccCC
Q 046637 241 L-TWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRGR 299 (301)
Q Consensus 241 ~-~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~~ 299 (301)
. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.+.....++++.
T Consensus 240 ~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l 299 (536)
T 3ni2_A 240 SIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSL 299 (536)
T ss_dssp HTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTC
T ss_pred HHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccc
Confidence 4 6888999999999999999999999999999999999999999999988777777653
No 8
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=1.2e-43 Score=323.81 Aligned_cols=272 Identities=32% Similarity=0.430 Sum_probs=226.1
Q ss_pred CCCCCHHHHHHHHhhhcCCccEEEE----CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhh
Q 046637 11 YVPLTPISFLERSAVVYRDRPSVVY----GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPM 86 (301)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~al~~----~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 86 (301)
..+.++.++|++.++++||++|+++ .++++||+||.++++++|..|.+.|+++||+|+++++|++++++++|||++
T Consensus 15 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 94 (541)
T 1v25_A 15 DEELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYFAVPG 94 (541)
T ss_dssp CCCCCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 3467999999999999999999995 457999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHH
Q 046637 87 AGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYES 166 (301)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (301)
+|++++|++|.++.+++.+++++++++++|++.+....+.......+ .++.++.++.... .+...+.+
T Consensus 95 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~~~ 162 (541)
T 1v25_A 95 MGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELK----TVQHFVVMDEKAP--------EGYLAYEE 162 (541)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCS----SCCEEEESSSCCC--------TTCEEHHH
T ss_pred cCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCC----CccEEEEecCCCC--------cccccHHH
Confidence 99999999999999999999999999999999877665555433332 4556666554321 12245665
Q ss_pred HHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHH--HHHHhhCCCCCEEEEeccchhhhhhHHHHH
Q 046637 167 LLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLA--AALFNEMGLMPTYLWCVPMFHCNGWCLTWA 244 (301)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~--~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~ 244 (301)
+....... ....++++++|+|||||||.||||++||.++..+... ....+++.++|++++.+|++|.+|+...+.
T Consensus 163 ~~~~~~~~---~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~ 239 (541)
T 1v25_A 163 ALGEEADP---VRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYA 239 (541)
T ss_dssp HCCSCCCC---CCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTHHHH
T ss_pred HhhccCCc---ccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHHHHHHH
Confidence 54332221 2356789999999999999999999999999876655 234567789999999999999999877788
Q ss_pred HHHhCCeEEeeC-CCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCcccccc
Q 046637 245 VAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFR 297 (301)
Q Consensus 245 ~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 297 (301)
++..|+++++.+ .+++..+++.++++++|+++++|++++.|++.......+++
T Consensus 240 ~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 293 (541)
T 1v25_A 240 ATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLK 293 (541)
T ss_dssp HHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCS
T ss_pred HHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcch
Confidence 999999999986 47999999999999999999999999999876543333443
No 9
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=1.7e-42 Score=314.30 Aligned_cols=258 Identities=16% Similarity=0.173 Sum_probs=216.9
Q ss_pred CCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeee
Q 046637 14 LTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCT 93 (301)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (301)
|++.++|++.++++||++|+++.++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vp 80 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIP 80 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEE
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhhcc-
Q 046637 94 LNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAIGK- 172 (301)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 172 (301)
++|.++.+++.++++.+++++++++...... ..+..+. .. ..+.+......
T Consensus 81 l~~~~~~~~l~~il~~~~~~~~i~~~~~~~~-------------~~~~~~~-~~--------------~~~~~~~~~~~~ 132 (512)
T 3fce_A 81 VDLSIPADRVQRIAENSGAKLLLSATAVTVT-------------DLPVRIV-SE--------------DNLKDIFFTHKG 132 (512)
T ss_dssp EETTSCHHHHHHHHHHSCCCEEEESSCCCSS-------------CCSSEEE-ET--------------HHHHHHHHHTTT
T ss_pred eCCCCcHHHHHHHHHhcCCCEEEecCccccc-------------cccccee-ch--------------hhhhhhcccccc
Confidence 9999999999999999999999998543211 1111111 00 11122111111
Q ss_pred -ccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhCCe
Q 046637 173 -LREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGT 251 (301)
Q Consensus 173 -~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~ 251 (301)
.........++++++|+|||||||.||||++||.++..........+++.++|++++..|++|.+++..++.++..|++
T Consensus 133 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 212 (512)
T 3fce_A 133 NTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGT 212 (512)
T ss_dssp CCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCE
T ss_pred cCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCE
Confidence 1112234667899999999999999999999999999999888888999999999999999999998888999999999
Q ss_pred EEeeCC---CCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccCC
Q 046637 252 NVCQRT---VNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRGR 299 (301)
Q Consensus 252 ~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~~ 299 (301)
+++.+. +++..+++.++++++|++.++|++++.+++.+.....++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l 263 (512)
T 3fce_A 213 LWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNM 263 (512)
T ss_dssp EEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTC
T ss_pred EEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccc
Confidence 999985 789999999999999999999999999998887776666543
No 10
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=6.4e-42 Score=316.89 Aligned_cols=263 Identities=21% Similarity=0.264 Sum_probs=225.9
Q ss_pred CCCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcc
Q 046637 9 ANYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAG 88 (301)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 88 (301)
.-|.++++.++|++.++ ||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 22 ~~~~~~~l~~~~~~~a~--pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG 99 (617)
T 3rg2_A 22 GYWQDLPLTDILTRHAA--SDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLG 99 (617)
T ss_dssp TSCCCCCTTHHHHTTTT--CCSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHhhC--CCCeEEecCCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcC
Confidence 35678999999999988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCceEEEEcCCch-----hhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCcc
Q 046637 89 AVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLL-----PIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLE 163 (301)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (301)
++++|++|..+.+++.++++++++++++++.... ........... .++.+...+.... ..
T Consensus 100 ~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-----------~~ 164 (617)
T 3rg2_A 100 VAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHS----SIRVVQLLNDSGE-----------HN 164 (617)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHST----TCCEEEEETCCST-----------TB
T ss_pred eEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCC----ccceeeecccccc-----------cc
Confidence 9999999999999999999999999999998764 22233333322 4455555443321 33
Q ss_pred HHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH--
Q 046637 164 YESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL-- 241 (301)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-- 241 (301)
+.+...............++++++|+|||||||.||||+++|.++..++......+++.+++++++..|++|.+++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~ 244 (617)
T 3rg2_A 165 LQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPG 244 (617)
T ss_dssp HHHHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSH
T ss_pred hhhhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhHHH
Confidence 444444333332334466789999999999999999999999999999998888899999999999999999999774
Q ss_pred HHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 242 TWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 242 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+++.
T Consensus 245 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 291 (617)
T 3rg2_A 245 SLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQA 291 (617)
T ss_dssp HHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHh
Confidence 78899999999999999999999999999999999999999999874
No 11
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=9.2e-42 Score=311.71 Aligned_cols=272 Identities=14% Similarity=0.096 Sum_probs=225.6
Q ss_pred CCHHH-HHHHHhhhcCCccEEEE--CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 14 LTPIS-FLERSAVVYRDRPSVVY--GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 14 ~~~~~-~l~~~~~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.++.+ +|.+.++++ |++|+++ .++++||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav 103 (548)
T 2d1s_A 25 AGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVG 103 (548)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCE
T ss_pred CcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCE
Confidence 47889 899999999 9999998 4689999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhh
Q 046637 91 LCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAI 170 (301)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (301)
++|++|.++.+++.+++++++++++|++......+.......+ ....++.++.... ..+...++++...
T Consensus 104 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 172 (548)
T 2d1s_A 104 VAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVT----TIKTIVILDSKVD-------YRGYQCLDTFIKR 172 (548)
T ss_dssp EEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHST----TCCEEEETTCSSC-------BTTBCBHHHHHHH
T ss_pred EeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCC----CCCEEEEeCCccc-------ccccccHHHHHhc
Confidence 9999999999999999999999999999887766655544332 2455666543210 0122456666554
Q ss_pred cccc-ccCCCC------CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hhCCCCCEEEEeccchhhhhhH
Q 046637 171 GKLR-EVRRPK------DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF---NEMGLMPTYLWCVPMFHCNGWC 240 (301)
Q Consensus 171 ~~~~-~~~~~~------~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~g~~ 240 (301)
.... ...... .++++++|+|||||||.||||++||.++..+....... +++.++|++++..|++|.+|+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~ 252 (548)
T 2d1s_A 173 NTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMF 252 (548)
T ss_dssp TSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHH
T ss_pred CccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHH
Confidence 3211 111111 23899999999999999999999999998887776655 5778899999999999999987
Q ss_pred H-HHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 241 L-TWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 241 ~-~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
. ++.++ .|+++++.+.+++..+++.++++++|+++++|++++.|++.+.....++++
T Consensus 253 ~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 310 (548)
T 2d1s_A 253 TTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSN 310 (548)
T ss_dssp HHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTT
T ss_pred HHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccc
Confidence 6 55666 999999999999999999999999999999999999999987766666654
No 12
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=2.8e-42 Score=312.28 Aligned_cols=249 Identities=24% Similarity=0.289 Sum_probs=207.2
Q ss_pred CCHHHHHHHHhhhcCCccEEEEC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcccee
Q 046637 14 LTPISFLERSAVVYRDRPSVVYG--DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVL 91 (301)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (301)
+++.++|++.++++||++|+++. ++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 67999999999999999999998 8899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEE--cCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHh
Q 046637 92 CTLNTRHDSAMVSVLLRHSEAKIIFV--DYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLA 169 (301)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (301)
+|++|.++.+++.+++++++++++++ +.+....+ ..... .++ ++.+++. ..
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~---~~~~~----~~~-~~~~~~~-------------------~~ 134 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAI---FQSGS----GAR-IIFLGDL-------------------VR 134 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHH---HHHCC----CCE-EEEGGGT-------------------EE
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhh---hhccc----cce-eEEecch-------------------hh
Confidence 99999999999999999999999999 65543322 01111 122 2222211 11
Q ss_pred hc-----cccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhC--CCCCEEEEeccchhhhhhH-H
Q 046637 170 IG-----KLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEM--GLMPTYLWCVPMFHCNGWC-L 241 (301)
Q Consensus 170 ~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~l~~~p~~h~~g~~-~ 241 (301)
.. ..........++++++|+|||||||.||||++||.++..........+++ .+++++++.+|++|.+|+. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 214 (504)
T 1t5h_X 135 DGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAV 214 (504)
T ss_dssp TTEECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTT
T ss_pred cCcccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHH
Confidence 10 00111123567899999999999999999999999999888877777777 7889999999999999985 5
Q ss_pred HHHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 242 TWAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 242 ~~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
++.++..|+++++.+.+++..+++.++++++|+++++|++++.|++.+
T Consensus 215 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 262 (504)
T 1t5h_X 215 LVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAA 262 (504)
T ss_dssp HHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHH
T ss_pred HHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhh
Confidence 788999999999999999999999999999999999999999998764
No 13
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=8.3e-42 Score=317.95 Aligned_cols=284 Identities=19% Similarity=0.263 Sum_probs=224.3
Q ss_pred CCHHHHHHHHhhhcCCccEEEE------CCeeeeHHHHHHHHHHHHHHHH-hcCCCCCCEEEEEcCCCHHHHHHHHHhhh
Q 046637 14 LTPISFLERSAVVYRDRPSVVY------GDVQYTWKETHQRCVKLASGLA-HLGISPGDVVAALAPNVPAMYELHFGVPM 86 (301)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 86 (301)
.++.++|++.++++||++|+++ .++++||+||.+++.++|..|+ ++|+++||+|+++++|++++++++|||++
T Consensus 82 n~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~ 161 (663)
T 1ry2_A 82 NACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISR 161 (663)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3567899999999999999998 3478999999999999999999 99999999999999999999999999999
Q ss_pred ccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhh-----HHHHHHHhccccCCCCceEEccCCCCCCcccccCCCC
Q 046637 87 AGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPI-----AQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGN 161 (301)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (301)
+|++++|+++.++.+++.+++++++++++|+++..... ............+.++.+++++....... .......
T Consensus 162 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~-~~~~~~~ 240 (663)
T 1ry2_A 162 IGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTNNPSV-AFHAPRD 240 (663)
T ss_dssp TTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSCCSSC-CCCSSSE
T ss_pred cCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCCCCcc-ccCCCcc
Confidence 99999999999999999999999999999998765321 11111111111114566776654321000 0001122
Q ss_pred ccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhhCCCCCEEEEeccchhhhhhH
Q 046637 162 LEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSL-AAALFNEMGLMPTYLWCVPMFHCNGWC 240 (301)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~l~~~p~~h~~g~~ 240 (301)
..|.++..............++++++|+|||||||+||||+++|.+++.+.. .....+++.++|++++..|++|+.|..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~ 320 (663)
T 1ry2_A 241 LDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHT 320 (663)
T ss_dssp EEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHH
T ss_pred ccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCCcHHhhhhH
Confidence 4577766543332222345678999999999999999999999999876654 344567889999999999999999985
Q ss_pred -HHHHHHHhCCeEEeeCC----CCHHHHHHHHHhcCcceecCChHHHHHHHcCCC--CccccccC
Q 046637 241 -LTWAVAAQGGTNVCQRT----VNAKEIFDNITRHKVTHFGGAPTVLNMIANAPP--VFENRFRG 298 (301)
Q Consensus 241 -~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~ 298 (301)
.++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|++... ..+.++++
T Consensus 321 ~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~s 385 (663)
T 1ry2_A 321 YVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKS 385 (663)
T ss_dssp HTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTT
T ss_pred HHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCc
Confidence 57899999999999864 589999999999999999999999999998765 34445554
No 14
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.3e-41 Score=307.75 Aligned_cols=262 Identities=19% Similarity=0.203 Sum_probs=219.6
Q ss_pred HHHHHHhhhcCCccEEEE---CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeec
Q 046637 18 SFLERSAVVYRDRPSVVY---GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL 94 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~---~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 94 (301)
++|++.++++|+++++.. .++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 4 ~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vpl 83 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLPL 83 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEec
Confidence 578899999999999884 66899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhhcccc
Q 046637 95 NTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAIGKLR 174 (301)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (301)
+|.++.+++.+++++++++++|++......+........ ..+..++.... ..+.+........
T Consensus 84 ~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----------~~~~~~~~~~~~~ 146 (503)
T 4fuq_A 84 NTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVG------ATVETLGPDGR-----------GSLTDAAAGASEA 146 (503)
T ss_dssp CTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHT------CEEEECCTTSC-----------SHHHHHHHTSCSC
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcC------ceEEEecCCcc-----------cccchhhhcCCCC
Confidence 999999999999999999999999877666655544332 23333332211 1222222222222
Q ss_pred ccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH-HHHHHHhCCeEE
Q 046637 175 EVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL-TWAVAAQGGTNV 253 (301)
Q Consensus 175 ~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~g~~~v 253 (301)
.......++++++|+|||||||.||||+++|.++..+.......+++.++|++++.+|++|.+|+.. .+.+++.|++++
T Consensus 147 ~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~ 226 (503)
T 4fuq_A 147 FATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMI 226 (503)
T ss_dssp CCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEE
T ss_pred cCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEE
Confidence 2333567899999999999999999999999999999998888899999999999999999999764 678899999999
Q ss_pred eeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 254 CQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 254 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
+.+.+++..+++.++ ++|+++++|+++..|++.+...+.++++
T Consensus 227 ~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 269 (503)
T 4fuq_A 227 FLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGH 269 (503)
T ss_dssp ECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTT
T ss_pred EcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhh
Confidence 999999999999998 8999999999999999988776666554
No 15
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=4.4e-41 Score=308.36 Aligned_cols=267 Identities=18% Similarity=0.174 Sum_probs=221.1
Q ss_pred CCCCCCCHHHHHHHHhhh-----cCCccEEEEC-----CeeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCHHH
Q 046637 9 ANYVPLTPISFLERSAVV-----YRDRPSVVYG-----DVQYTWKETHQRCVKLASGLAHL-GISPGDVVAALAPNVPAM 77 (301)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~-----~~~~~al~~~-----~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~ 77 (301)
.+.....+.++|++.+++ +||++|+++. ++++||+||.++++++|..|.+. |+++||+|+++++|++++
T Consensus 33 ~~~~~~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~ 112 (570)
T 3c5e_A 33 VPAKFNFASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEW 112 (570)
T ss_dssp CCSBCCHHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHH
T ss_pred CCccccHHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHH
Confidence 333334457999999998 9999999982 37899999999999999999998 999999999999999999
Q ss_pred HHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCccccc
Q 046637 78 YELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVAS 157 (301)
Q Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 157 (301)
++++|||+++|++++|++|.++.+++.+++++++++++|++.+....+.......+ .++.++.++....
T Consensus 113 ~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~------- 181 (570)
T 3c5e_A 113 WLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECP----SLRIKLLVSEKSC------- 181 (570)
T ss_dssp HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCT----TCCEEEEESSSCC-------
T ss_pred HHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCC----ceeEEEEecccCc-------
Confidence 99999999999999999999999999999999999999999887666555443333 4555665553211
Q ss_pred CCCCccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHH--HHHHHHHHhhCCCCCEEEEeccchh
Q 046637 158 SSGNLEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYL--NSLAAALFNEMGLMPTYLWCVPMFH 235 (301)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~--~~~~~~~~~~~~~~~~~l~~~p~~h 235 (301)
.+...+.++..............++++++|+|||||||.||||+++|. ++. ..... ..+++.++|++++..|++|
T Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~ 258 (570)
T 3c5e_A 182 -DGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGLQASDIMWTISDTGW 258 (570)
T ss_dssp -TTSEEHHHHHHHSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSCCTTCEEEECCCTTS
T ss_pred -cccccHHHHhhcccccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCCCCCceEEEcCchHH
Confidence 223557766654433322234667899999999999999999999999 544 33333 5667889999999999999
Q ss_pred hhhhH-HHHHHHHhCCeEEeeC--CCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 236 CNGWC-LTWAVAAQGGTNVCQR--TVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 236 ~~g~~-~~~~~l~~g~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
.+|+. .++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|++..
T Consensus 259 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 315 (570)
T 3c5e_A 259 ILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD 315 (570)
T ss_dssp HHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc
Confidence 99987 4788999999999986 689999999999999999999999999999863
No 16
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.4e-41 Score=309.50 Aligned_cols=268 Identities=19% Similarity=0.209 Sum_probs=213.9
Q ss_pred CHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeec
Q 046637 15 TPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL 94 (301)
Q Consensus 15 ~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 94 (301)
++.++|++.++ +||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 25 ~~~~~l~~~~~-~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 103 (529)
T 2v7b_A 25 FAAYLFRLNET-RAGKTAYIDDTGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVA 103 (529)
T ss_dssp HHHHHHHHTGG-GTTSEEEECSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHhhhc-cCCceEEEeCCCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEec
Confidence 47899999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCC-CceEEccCCCCCCcccccCCCCccHHHHHhhccc
Q 046637 95 NTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKL-PLLVLVPECGEPVSTVASSSGNLEYESLLAIGKL 173 (301)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (301)
++.++.+++.+++++++++++|++......+.+...... .. ..++.++..... ......++++......
T Consensus 104 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 173 (529)
T 2v7b_A 104 NTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAE----HDGCQLIVSQPRESE------PRLAPLFEELIDAAAP 173 (529)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC-------CCEEEEECC------------CCCBHHHHHHTSCC
T ss_pred CcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhcc----ccCceEEEecccccc------cccccchhhhhccCCC
Confidence 999999999999999999999999877655544433222 23 344443322100 0011346666553332
Q ss_pred cccCCCCCCCCceEEEeccCCCCCCCeeeechHHH-HHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH-HHHHHHhCCe
Q 046637 174 REVRRPKDECDPIALNYTSGTTSSPKGVICSHRGA-YLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL-TWAVAAQGGT 251 (301)
Q Consensus 174 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l-~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~l~~g~~ 251 (301)
........++++++|+|||||||.||||++||.++ ..........+++.++|++++..|++|.+|+.. ++.++..|++
T Consensus 174 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~ 253 (529)
T 2v7b_A 174 AAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGAT 253 (529)
T ss_dssp CSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCE
T ss_pred cccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcE
Confidence 22223466789999999999999999999999998 555544445567889999999999999999875 6778999999
Q ss_pred EEee-CCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCcc
Q 046637 252 NVCQ-RTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFE 293 (301)
Q Consensus 252 ~v~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 293 (301)
+++. +.+++..+++.++++++|+++++|+++..+++.+....
T Consensus 254 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 296 (529)
T 2v7b_A 254 AILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPA 296 (529)
T ss_dssp EECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCC
T ss_pred EEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCccccc
Confidence 9988 67899999999999999999999999999998765443
No 17
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=1e-41 Score=317.12 Aligned_cols=280 Identities=18% Similarity=0.260 Sum_probs=223.7
Q ss_pred CHHHHHHHHhhhcCCccEEEE------CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcc
Q 046637 15 TPISFLERSAVVYRDRPSVVY------GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAG 88 (301)
Q Consensus 15 ~~~~~l~~~~~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 88 (301)
.+.++|+++++++||++|+++ .++++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|
T Consensus 77 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~G 156 (652)
T 1pg4_A 77 LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIG 156 (652)
T ss_dssp HHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 467889999999999999998 23789999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchh---------hHHHHHHHhccccCCCCceEEccCCCCCCcccccCC
Q 046637 89 AVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLP---------IAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSS 159 (301)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 159 (301)
++++|+++.++.+++.+++++++++++|+++.... .+.+.....+. ..++.+++++...... .....
T Consensus 157 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~~~~~~~--~~~~~ 232 (652)
T 1pg4_A 157 AVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNV--TSVEHVIVLKRTGSDI--DWQEG 232 (652)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTC--CSCCEEEEECSSCCCC--CCCBT
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCc--CCCCEEEEEeCCCCcc--cccCC
Confidence 99999999999999999999999999999876432 22222221110 0345666665432110 00011
Q ss_pred CCccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHH-HHHHHhhCCCCCEEEEeccchhhhh
Q 046637 160 GNLEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSL-AAALFNEMGLMPTYLWCVPMFHCNG 238 (301)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~-~~~~~~~~~~~~~~l~~~p~~h~~g 238 (301)
....|.++..............++++++|+|||||||.||||+++|.+++.+.. .....+++.++|++++..|++|+.|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~g 312 (652)
T 1pg4_A 233 RDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTG 312 (652)
T ss_dssp TEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHH
T ss_pred CceeHHHHHhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCCeeeec
Confidence 224577776654332223345678999999999999999999999999887664 4455678899999999999999999
Q ss_pred hH-HHHHHHHhCCeEEeeCC----CCHHHHHHHHHhcCcceecCChHHHHHHHcCCC--CccccccC
Q 046637 239 WC-LTWAVAAQGGTNVCQRT----VNAKEIFDNITRHKVTHFGGAPTVLNMIANAPP--VFENRFRG 298 (301)
Q Consensus 239 ~~-~~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~ 298 (301)
+. .++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|++... ....++++
T Consensus 313 ~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~s 379 (652)
T 1pg4_A 313 HSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSS 379 (652)
T ss_dssp HHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTT
T ss_pred hHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCc
Confidence 85 57899999999999874 589999999999999999999999999998754 33344544
No 18
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1.9e-42 Score=311.74 Aligned_cols=271 Identities=17% Similarity=0.170 Sum_probs=208.4
Q ss_pred cccCCCCCCCCHHHHHHHHhhhcCCccEEEECC---------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCH
Q 046637 5 IRCSANYVPLTPISFLERSAVVYRDRPSVVYGD---------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVP 75 (301)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~ 75 (301)
+....+++.+++.++|++.++++||++|+++.+ +++||+||.++++++|+.|.+.|+ +||+|+++++|++
T Consensus 15 ~~~~~~~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~ 93 (480)
T 3t5a_A 15 VPRGSHMSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGL 93 (480)
T ss_dssp ---------CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSH
T ss_pred CcccCCCCcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcH
Confidence 344566788999999999999999999999865 899999999999999999999996 9999999999999
Q ss_pred HHHHHHHHhhhccceeeecCC---CCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCC
Q 046637 76 AMYELHFGVPMAGAVLCTLNT---RHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPV 152 (301)
Q Consensus 76 ~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 152 (301)
++++++|||+++|++++|+++ ..+.+++.+++++++++++|++......+.+........ ....++.++....
T Consensus 94 e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 169 (480)
T 3t5a_A 94 EYVVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGE--SPPSIIEVDLLDL-- 169 (480)
T ss_dssp HHHHHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC--------CCEEEEGGGSCT--
T ss_pred HHHHHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccc--cccceeEeccccc--
Confidence 999999999999999999999 778999999999999999999988766554433222110 1123444332211
Q ss_pred cccccCCCCccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCC------CCE
Q 046637 153 STVASSSGNLEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGL------MPT 226 (301)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~------~~~ 226 (301)
............++++++|+|||||||.||||++||.++..++......+.+.. +++
T Consensus 170 -----------------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~ 232 (480)
T 3t5a_A 170 -----------------DAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSA 232 (480)
T ss_dssp -----------------TCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEE
T ss_pred -----------------ccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCe
Confidence 000111223466789999999999999999999999999999888888887777 899
Q ss_pred EEEeccchhhhhhHH-HHHHHHhCCeEEeeCCC----CHHHHHHHHHhcCcceecCChHHHHHHHcC----CCCcccccc
Q 046637 227 YLWCVPMFHCNGWCL-TWAVAAQGGTNVCQRTV----NAKEIFDNITRHKVTHFGGAPTVLNMIANA----PPVFENRFR 297 (301)
Q Consensus 227 ~l~~~p~~h~~g~~~-~~~~l~~g~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----~~~~~~~l~ 297 (301)
+++.+|++|.+|+.. ++.++..|+++++.+.+ ++..+++.++++++| +.++|+++..++.. +.....+++
T Consensus 233 ~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~l~ 311 (480)
T 3t5a_A 233 LVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRDLG 311 (480)
T ss_dssp EEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCCCT
T ss_pred EEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccchh
Confidence 999999999999764 78899999999998753 899999999999999 88899998888763 333444554
Q ss_pred C
Q 046637 298 G 298 (301)
Q Consensus 298 ~ 298 (301)
+
T Consensus 312 ~ 312 (480)
T 3t5a_A 312 N 312 (480)
T ss_dssp T
T ss_pred h
Confidence 4
No 19
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.7e-42 Score=312.29 Aligned_cols=273 Identities=17% Similarity=0.160 Sum_probs=211.8
Q ss_pred CCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeee
Q 046637 14 LTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCT 93 (301)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 93 (301)
|++.++|+++++++||++|+++.++++||+||.++++++|..|.+. +||+|+++++|+++++++++||+++|++++|
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp 77 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAM 77 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECSSCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeCCcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Confidence 5778899999999999999999999999999999999999999987 8999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhhccc
Q 046637 94 LNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAIGKL 173 (301)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (301)
+++.++.+++.++++.++++++|++............ .. .+..+......................+........
T Consensus 78 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (501)
T 3ipl_A 78 INTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVS-LD----DIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESP 152 (501)
T ss_dssp CCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEE-TT----C--------------------------------CCH
T ss_pred cCccCCHHHHHHHHHhcCCCEEEEccccccccccccc-cc----cceeeeeecccccccccccccccccchhhccccCCc
Confidence 9999999999999999999999998765433211000 00 111111000000000000000000001111111111
Q ss_pred c-ccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhCCeE
Q 046637 174 R-EVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTN 252 (301)
Q Consensus 174 ~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~ 252 (301)
. .......++++++|+|||||||.||||++||.++..........+++.+++++++..|++|.+|+..++.++..|+++
T Consensus 153 ~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~ 232 (501)
T 3ipl_A 153 SNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTV 232 (501)
T ss_dssp HHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEE
T ss_pred ccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceE
Confidence 1 122346789999999999999999999999999999998888889999999999999999999998889999999999
Q ss_pred EeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccc
Q 046637 253 VCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFEN 294 (301)
Q Consensus 253 v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 294 (301)
++.+.+++..+++.++++++|+++++|++++.|++.......
T Consensus 233 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 274 (501)
T 3ipl_A 233 RIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPY 274 (501)
T ss_dssp EECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCT
T ss_pred EeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcC
Confidence 999999999999999999999999999999999987655443
No 20
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=7.5e-41 Score=307.33 Aligned_cols=273 Identities=14% Similarity=0.080 Sum_probs=226.2
Q ss_pred CCCHH-HHHHHHhhhcCCccEEEE-----CCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhh
Q 046637 13 PLTPI-SFLERSAVVYRDRPSVVY-----GDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPM 86 (301)
Q Consensus 13 ~~~~~-~~l~~~~~~~~~~~al~~-----~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 86 (301)
..|+. ++|++.++++||++|+++ .++.+||+||.++++++|..|++.|+++||+|+++++|++++++++|||++
T Consensus 54 ~~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~ 133 (580)
T 3etc_A 54 NFNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHK 133 (580)
T ss_dssp SCCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 34555 999999999999999997 236899999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCch--hhHHHHHHHhccccCCC-CceEEccCCCCCCcccccCCCCcc
Q 046637 87 AGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLL--PIAQGAFEILSKTSAKL-PLLVLVPECGEPVSTVASSSGNLE 163 (301)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~ 163 (301)
+|++++|++|.++.+++.+++++++++++|++.+.. ..+.+.....+ .+ ..++.++... ..++..
T Consensus 134 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~ 201 (580)
T 3etc_A 134 LGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECG----DIPLKKAKVGGDV--------LEGWID 201 (580)
T ss_dssp HTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHC----SCCCEEEEESSSC--------CTTCEE
T ss_pred CCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCC----CcceEEEEeCCcc--------cccccc
Confidence 999999999999999999999999999999988765 55555555544 34 4445544321 134466
Q ss_pred HHHHHhhcccccc-C---CCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhh
Q 046637 164 YESLLAIGKLREV-R---RPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGW 239 (301)
Q Consensus 164 ~~~~~~~~~~~~~-~---~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~ 239 (301)
+.+.......... . ....++++++|+|||||||.||||+++|.+++..........++.+++++++..|++|..++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (580)
T 3etc_A 202 FRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCV 281 (580)
T ss_dssp HHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTHHH
T ss_pred HHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHHHH
Confidence 7776655444311 1 24678999999999999999999999999998877766666788899999999999999887
Q ss_pred HH-HHHHHHhCCeEEee--CCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 240 CL-TWAVAAQGGTNVCQ--RTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 240 ~~-~~~~l~~g~~~v~~--~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
.. ++.++..|+++++. +.+++..+++.++++++|+++++|++++.|++. .....++++
T Consensus 282 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~~~~l~~ 342 (580)
T 3etc_A 282 WGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE-DLSHYNFST 342 (580)
T ss_dssp HHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS-CC---CCTT
T ss_pred HHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc-ccccCCCcc
Confidence 64 78889999999887 578999999999999999999999999999986 334445543
No 21
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.4e-41 Score=304.93 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=220.0
Q ss_pred CCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhc-CCCCCCEEEEEcCCCHHHHHHHHHhhhccceee
Q 046637 14 LTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHL-GISPGDVVAALAPNVPAMYELHFGVPMAGAVLC 92 (301)
Q Consensus 14 ~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 92 (301)
|++.++|+++++++||++|+++.++++||+||.++++++|..|.+. |.++|++|+++++|++++++++|||+++|++++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 80 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYI 80 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEE
T ss_pred CcHHHHHHHHHHHCCCCeEEEcCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEE
Confidence 6899999999999999999999999999999999999999999985 889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhhcc
Q 046637 93 TLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAIGK 172 (301)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (301)
|+++.++.+++.+++++++++++|++...... .... ......+.++.....
T Consensus 81 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~-------------~~~~----------------~~~~~~~~~~~~~~~ 131 (511)
T 3e7w_A 81 PVDLSIPSERIAKIIESSGAELLIHAAGLSID-------------AVGQ----------------QIQTVSAEELLENEG 131 (511)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEESSSCCTT-------------CCCC----------------SSCEEEHHHHHTSCS
T ss_pred ecCCCChHHHHHHHHHhCCCCEEEecccccch-------------hccc----------------ccceecHhhhhcccc
Confidence 99999999999999999999999997543211 0000 000123334333222
Q ss_pred cc-ccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhCCe
Q 046637 173 LR-EVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGT 251 (301)
Q Consensus 173 ~~-~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~ 251 (301)
.. .......++++++|+|||||||.||||++||.++..........+++..++++++..|++|.+++..++.++..|++
T Consensus 132 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 211 (511)
T 3e7w_A 132 GSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGT 211 (511)
T ss_dssp CCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCE
T ss_pred CCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHHHHHHHhcCCE
Confidence 22 22223567899999999999999999999999999998888888899999999999999999998888999999999
Q ss_pred EEeeCC---CCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 252 NVCQRT---VNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 252 ~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
+++.+. +++..+++.++++++|++.++|++++.+++.+.....++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 261 (511)
T 3e7w_A 212 LHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPH 261 (511)
T ss_dssp EEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTT
T ss_pred EEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCc
Confidence 999875 68999999999999999999999999999988777666654
No 22
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=5.4e-41 Score=325.41 Aligned_cols=276 Identities=20% Similarity=0.242 Sum_probs=230.1
Q ss_pred CCCHHHHHHHHhhhcCCccEEEEC--CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 13 PLTPISFLERSAVVYRDRPSVVYG--DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 13 ~~~~~~~l~~~~~~~~~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.+++.++|+++++++||++|+++. ++++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 60 ~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~ 139 (979)
T 3tsy_A 60 HLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGAT 139 (979)
T ss_dssp TSCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCE
T ss_pred CCCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCE
Confidence 579999999999999999999996 689999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhh
Q 046637 91 LCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAI 170 (301)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (301)
++|++|.++.+++.+++++++++++|++......+....... ...++.++..... ....+...+.++...
T Consensus 140 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 209 (979)
T 3tsy_A 140 ATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD------GVVIVCIDDNESV----PIPEGCLRFTELTQS 209 (979)
T ss_dssp EEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS------CCEEEECCCCTTS----CCCTTEEEGGGTSSC
T ss_pred EEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC------CceEEEeCCcccc----cCCcccccHHHHhhc
Confidence 999999999999999999999999999988877666654331 1234444432111 111223444444333
Q ss_pred ccc---cccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHH----HhhCCCCCEEEEeccchhhhhhHH-H
Q 046637 171 GKL---REVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAAL----FNEMGLMPTYLWCVPMFHCNGWCL-T 242 (301)
Q Consensus 171 ~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~~~~l~~~p~~h~~g~~~-~ 242 (301)
... ........++++++|+|||||||.||||+++|.++...+..... .+.+.+++++++.+|++|.+|+.. +
T Consensus 210 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~ 289 (979)
T 3tsy_A 210 TTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYALNSIM 289 (979)
T ss_dssp CSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHHHHHTH
T ss_pred cccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHHHHHHH
Confidence 222 12223467899999999999999999999999999887766543 345778999999999999999864 6
Q ss_pred HHHHHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 243 WAVAAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 243 ~~~l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..|++.+.....++++
T Consensus 290 ~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 345 (979)
T 3tsy_A 290 LCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSS 345 (979)
T ss_dssp HHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTT
T ss_pred HHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccc
Confidence 88899999999999999999999999999999999999999999987776666654
No 23
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=6e-41 Score=307.03 Aligned_cols=259 Identities=15% Similarity=0.148 Sum_probs=211.9
Q ss_pred ccccCCCCC-CCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHH
Q 046637 4 MIRCSANYV-PLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHF 82 (301)
Q Consensus 4 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 82 (301)
++....+++ ..++.++|++.++++||++|+++.++++||+||.++++++|..|.+.|+++||+|+++++|++++++++|
T Consensus 28 ~~~~~~~~~~~~~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 107 (563)
T 1amu_A 28 VNNTKAEYPRDKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGIL 107 (563)
T ss_dssp TTCCCCCCCTTCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHH
T ss_pred hCCCCCCCCCCCcHHHHHHHHHHHCCCCeEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 455555555 5799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCc
Q 046637 83 GVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNL 162 (301)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 162 (301)
||+++|++++|++|.++.+++.+++++++++++|++.+....... .. ....+..++....
T Consensus 108 A~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~----~~----~~~~~~~~~~~~~------------ 167 (563)
T 1amu_A 108 AVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHN----IQ----FNGQVEIFEEDTI------------ 167 (563)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTT----SC----CCSEEEECCCSTT------------
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhh----cc----ccCceeeecchhh------------
Confidence 999999999999999999999999999999999998765432211 11 1112333222100
Q ss_pred cHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHH
Q 046637 163 EYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLT 242 (301)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~ 242 (301)
.............++++++|+|||||||.||||++||.++.+........+++.++|++++..|++|.+++..+
T Consensus 168 ------~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~ 241 (563)
T 1amu_A 168 ------KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEM 241 (563)
T ss_dssp ------TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHHH
T ss_pred ------ccccCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHH
Confidence 00001111123567899999999999999999999999999888877777888999999999999999998878
Q ss_pred HHHHHhCCeEEeeCC---CCHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 243 WAVAAQGGTNVCQRT---VNAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 243 ~~~l~~g~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
+.++..|+++++.+. +++..+++.++++++|++.++|+++..|.+.
T Consensus 242 ~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 290 (563)
T 1amu_A 242 FMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE 290 (563)
T ss_dssp HHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT
T ss_pred HHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc
Confidence 889999999999875 6899999999999999999999999887643
No 24
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=2.1e-40 Score=301.21 Aligned_cols=256 Identities=15% Similarity=0.115 Sum_probs=214.6
Q ss_pred CCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcccee
Q 046637 12 VPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVL 91 (301)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (301)
+..++.+.|++.++++||++|+.+.++++||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~ 81 (521)
T 3l8c_A 2 SLKDMIDSIEQFAQTQADFPVYDCLGERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAY 81 (521)
T ss_dssp CCCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCE
T ss_pred cHHHHHHHHHHHHHHCCCCcceecCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHH---
Q 046637 92 CTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLL--- 168 (301)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--- 168 (301)
+|++|.++.+++.++++.++++++|++++.... +..+.. ..+.++.
T Consensus 82 vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~--------------~~~~~~-----------------~~~~~~~~~~ 130 (521)
T 3l8c_A 82 IPVDVHSAPERILAIIEIAKPSLIIAIEEFPLT--------------IEGISL-----------------VSLSEIESAK 130 (521)
T ss_dssp EEEETTSCHHHHHHHHHHSCCSEEEESSCCCSC--------------CTTSEE-----------------EEHHHHHHHH
T ss_pred EecCccccHHHHHHHHHhCCCCEEEecCccccc--------------cccCcc-----------------cchhhhhhcc
Confidence 999999999999999999999999998765321 111100 1111111
Q ss_pred hhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH--hhCCCCCEEEEeccchhhhhhHHHHHHH
Q 046637 169 AIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF--NEMGLMPTYLWCVPMFHCNGWCLTWAVA 246 (301)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~--~~~~~~~~~l~~~p~~h~~g~~~~~~~l 246 (301)
.............++++++|+|||||||.||||++||.++.+........ +....++++++..|++|..++..++.++
T Consensus 131 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 210 (521)
T 3l8c_A 131 LAEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMYWAPTL 210 (521)
T ss_dssp HHTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHHHHHHH
T ss_pred cccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHHHHHHH
Confidence 11111222334678999999999999999999999999998877665554 6677889999999999999988888899
Q ss_pred HhCCeEEeeCCC---CHHHHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 247 AQGGTNVCQRTV---NAKEIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 247 ~~g~~~v~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
..|+++++.+.+ ++..+++.+.++++|++.++|++++.++........++++
T Consensus 211 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 265 (521)
T 3l8c_A 211 ALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPA 265 (521)
T ss_dssp HTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTT
T ss_pred hcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCcc
Confidence 999999998754 8999999999999999999999999999887766666654
No 25
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=1.2e-40 Score=305.69 Aligned_cols=248 Identities=20% Similarity=0.227 Sum_probs=208.3
Q ss_pred CCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcccee
Q 046637 12 VPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVL 91 (301)
Q Consensus 12 ~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 91 (301)
...++.++|++.++++||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 73 ~~~~l~~~l~~~a~~~pd~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 152 (570)
T 4gr5_A 73 AGACVHELFEAQAARAPDAVALLHEADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGGY 152 (570)
T ss_dssp CSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCHHHHHHHHHHHCCCCeEEECCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHhhc
Q 046637 92 CTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLAIG 171 (301)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (301)
+|++|.++.+++.+++++++++++|++......+ . ....+...+... ...
T Consensus 153 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-------~----~~~~~~~~~~~~-------------------~~~ 202 (570)
T 4gr5_A 153 TMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRL-------T----GTTTLYVEDEAA-------------------SDA 202 (570)
T ss_dssp EECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSS-------C----SSEEEECCC-------------------------
T ss_pred EEcCCCChHHHHHHHHHhcCCCEEEecchhhhcc-------c----CCcceeeecccc-------------------ccc
Confidence 9999999999999999999999999987654321 0 111222111110 000
Q ss_pred cccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhCCe
Q 046637 172 KLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGT 251 (301)
Q Consensus 172 ~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~ 251 (301)
..........++++++|+|||||||.||||++||.++.+.... ...+.+.+++++++..|++|..+...++.++..|++
T Consensus 203 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 281 (570)
T 4gr5_A 203 PAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGAR 281 (570)
T ss_dssp -CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCE
T ss_pred cccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCE
Confidence 1111223467889999999999999999999999999766554 345577889999999999987777778889999999
Q ss_pred EEeeC--CCCHHHHHHHHHhcCcceecCChHHHHHHHcCCC
Q 046637 252 NVCQR--TVNAKEIFDNITRHKVTHFGGAPTVLNMIANAPP 290 (301)
Q Consensus 252 ~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 290 (301)
+++.+ .+++..+++.++++++|++.++|++++.|++...
T Consensus 282 ~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 322 (570)
T 4gr5_A 282 CVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP 322 (570)
T ss_dssp EEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG
T ss_pred EEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch
Confidence 99986 5789999999999999999999999999987543
No 26
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=1.4e-40 Score=307.26 Aligned_cols=247 Identities=15% Similarity=0.159 Sum_probs=209.5
Q ss_pred CCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 10 NYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
.+.+.++.++|++.++++||++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 23 ~~~~~tl~~~~~~~a~~~Pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa 102 (620)
T 4dg8_A 23 LYAHPTVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGH 102 (620)
T ss_dssp GGGSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHHHhCCCCeEEEcCCCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHHHHh
Q 046637 90 VLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYESLLA 169 (301)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (301)
+++|++|.++.+++.+++++++++++++++....... ....+. +....
T Consensus 103 ~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~-----------~~~~~~-~~~~~-------------------- 150 (620)
T 4dg8_A 103 HYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPAN-----------GLPCVP-VRHLP-------------------- 150 (620)
T ss_dssp EEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCT-----------TSCEEE-GGGCC--------------------
T ss_pred EEEeeCccChHHHHHHHHHhCCCcEEEecCccccccc-----------CCceee-eccCC--------------------
Confidence 9999999999999999999999999997654322100 111111 11100
Q ss_pred hccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhC
Q 046637 170 IGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQG 249 (301)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g 249 (301)
............++++++|+|||||||.||||+++|.++.+.+.. ...+.+.+++++++..|++|..++..++.++..|
T Consensus 151 ~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 229 (620)
T 4dg8_A 151 AAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNG 229 (620)
T ss_dssp CCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTT
T ss_pred cCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcC
Confidence 000011122356789999999999999999999999999776655 4567788999999999999999988889999999
Q ss_pred CeEEeeC--CCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 250 GTNVCQR--TVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 250 ~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
+++++.+ .+++..+++.++++++|++.++|++++.|++..
T Consensus 230 ~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~ 271 (620)
T 4dg8_A 230 GCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD 271 (620)
T ss_dssp CEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC
T ss_pred CEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC
Confidence 9999964 679999999999999999999999999998643
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=4.2e-41 Score=310.29 Aligned_cols=257 Identities=17% Similarity=0.124 Sum_probs=213.1
Q ss_pred CCCCCHHHHHHHHhhhcCCccEEEEC----CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhh
Q 046637 11 YVPLTPISFLERSAVVYRDRPSVVYG----DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPM 86 (301)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~al~~~----~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 86 (301)
.+.+++.++|++.++++||++|+++. ++++||+||.++++++|..|.+.|+++||+|+++++|++++++++|||++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 87 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLY 87 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 46789999999999999999999874 47999999999999999999999999999999999999999999999999
Q ss_pred ccceeeecCCCC---CHHHHHHHHHhcCceEEEEcCCchhhHHHHH-HHhccccCCCCceEEccCCCCCCcccccCCCCc
Q 046637 87 AGAVLCTLNTRH---DSAMVSVLLRHSEAKIIFVDYQLLPIAQGAF-EILSKTSAKLPLLVLVPECGEPVSTVASSSGNL 162 (301)
Q Consensus 87 ~G~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 162 (301)
+|++++|++|.. +.+++.++++.+++++++++.+....+.... ...+ ....+..+...
T Consensus 88 ~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-------------- 149 (590)
T 3kxw_A 88 AGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNP----KFLKIPAIALE-------------- 149 (590)
T ss_dssp TTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CC----EETTEEEEEGG--------------
T ss_pred hCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcc----cccccceeech--------------
Confidence 999999999988 4578999999999999999876554432221 1111 11122221110
Q ss_pred cHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH-
Q 046637 163 EYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL- 241 (301)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~- 241 (301)
++..............++++++|+|||||||.||||++||.+++.++......+++.++|++++.+|++|.+|+..
T Consensus 150 ---~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 226 (590)
T 3kxw_A 150 ---SIELNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGC 226 (590)
T ss_dssp ---GCCGGGGGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTT
T ss_pred ---hccccccccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHH
Confidence 0000011111223467889999999999999999999999999999999888899999999999999999999876
Q ss_pred HHHHHHhCCeEEeeCCC----CHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 242 TWAVAAQGGTNVCQRTV----NAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 242 ~~~~l~~g~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
++.++..|+++++.+.+ ++..+++.++++++|++.++|.+++.+++.
T Consensus 227 ~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 277 (590)
T 3kxw_A 227 ILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKR 277 (590)
T ss_dssp THHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHH
T ss_pred HHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHH
Confidence 78899999999998865 899999999999999999999999999875
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2.6e-38 Score=290.81 Aligned_cols=255 Identities=21% Similarity=0.169 Sum_probs=210.2
Q ss_pred CCCCCHHHHHHHHhhhcCCccEEEEC---CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhc
Q 046637 11 YVPLTPISFLERSAVVYRDRPSVVYG---DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMA 87 (301)
Q Consensus 11 ~~~~~~~~~l~~~~~~~~~~~al~~~---~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 87 (301)
....++.++|+++++++|+.+++... ++++||+||.++++++|+.|.++|+++||+|+++++|+++++++++||+++
T Consensus 18 ~~~~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (576)
T 3gqw_A 18 ADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYA 97 (576)
T ss_dssp SCCSSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 34669999999999999998888653 379999999999999999999999999999999999999999999999999
Q ss_pred cceeeecCCCCC-------HHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCC
Q 046637 88 GAVLCTLNTRHD-------SAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSG 160 (301)
Q Consensus 88 G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (301)
|++++|+++.++ .+++.++++.+++++++++.+....+....... +.+..+.
T Consensus 98 G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-------~~~~~~~-------------- 156 (576)
T 3gqw_A 98 GLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDN-------PELHVLS-------------- 156 (576)
T ss_dssp TCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGC-------TTCEEEE--------------
T ss_pred CCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccC-------Ccceecc--------------
Confidence 999999999998 899999999999999999987766555443221 1111111
Q ss_pred CccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH-hhCCCCCEEEEeccchhhhhh
Q 046637 161 NLEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF-NEMGLMPTYLWCVPMFHCNGW 239 (301)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~-~~~~~~~~~l~~~p~~h~~g~ 239 (301)
..+. ..............++++++|+|||||||.||||+++|.++..++...... +++.++|++++.+|++|.+|+
T Consensus 157 -~~~~--~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 233 (576)
T 3gqw_A 157 -HAWF--KALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGL 233 (576)
T ss_dssp -HHHH--HTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTTSHHHH
T ss_pred -hhhh--hcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCccccccH
Confidence 0010 011111112233567899999999999999999999999999888776554 788899999999999999998
Q ss_pred HH-HHHHHHhCCeEEeeCC----CCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 240 CL-TWAVAAQGGTNVCQRT----VNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 240 ~~-~~~~l~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
.. ++.++..|+++++.+. +++..+++.++++++|+++++|++++.+.+..
T Consensus 234 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 288 (576)
T 3gqw_A 234 VGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRV 288 (576)
T ss_dssp HHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSC
T ss_pred HHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHh
Confidence 75 6777888999888763 68999999999999999999999999887653
No 29
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=1.1e-38 Score=316.67 Aligned_cols=260 Identities=17% Similarity=0.210 Sum_probs=218.4
Q ss_pred CcccccCCCCCCCCHHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHH
Q 046637 2 EGMIRCSANYVPLTPISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELH 81 (301)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~ 81 (301)
..+|....+++..++.++|++.++++||++|+++.++++||+||.++++++|+.|.+.|+++|++|+|+++|++++++++
T Consensus 452 ~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~ 531 (1304)
T 2vsq_A 452 TGLNPPAQAHETKPLTYWFKEAVNANPDAPALTYSGQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGI 531 (1304)
T ss_dssp TTTSCCCCCCCCCCHHHHHHHHHHHCTTSEEEESSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHH
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEECCeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHH
Confidence 35777777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCC
Q 046637 82 FGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGN 161 (301)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (301)
|||+++|++++|++|.++.+++.++++++++++++++......... .+ .....+.+++..
T Consensus 532 lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~----~~----~~~~~~~~~~~~------------ 591 (1304)
T 2vsq_A 532 LGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAE----LP----YTGTTLFIDDQT------------ 591 (1304)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTT----CC----CCSEEEESSCGG------------
T ss_pred HHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhc----cC----CCCcEEEecccc------------
Confidence 9999999999999999999999999999999999998765432111 11 112233332210
Q ss_pred ccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH
Q 046637 162 LEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL 241 (301)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~ 241 (301)
.+ . ...........++++++|+|||||||+||||+++|.++.+. ......+.+.++++++...|++|..+...
T Consensus 592 -~~----~-~~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~~~ 664 (1304)
T 2vsq_A 592 -RF----E-EQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFTFD 664 (1304)
T ss_dssp -GG----G-SCSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHHHH
T ss_pred -cc----c-cccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHHHH
Confidence 00 0 01111223456789999999999999999999999999865 44445567889999999999999888877
Q ss_pred HHHHHHhCCeEEeeCC---CCHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 242 TWAVAAQGGTNVCQRT---VNAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 242 ~~~~l~~g~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
++.++..|+++++.+. .++..+++.++++++|+++++|++++.|.+.
T Consensus 665 ~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~ 714 (1304)
T 2vsq_A 665 FYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDA 714 (1304)
T ss_dssp HHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhh
Confidence 8999999999999873 6899999999999999999999999999864
No 30
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=3.8e-38 Score=288.85 Aligned_cols=256 Identities=19% Similarity=0.177 Sum_probs=204.7
Q ss_pred CCCCCCCHHHHHHHHhhhcCCccEEEECC----------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHH
Q 046637 9 ANYVPLTPISFLERSAVVYRDRPSVVYGD----------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMY 78 (301)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~al~~~~----------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~ 78 (301)
..+..+++.++|+++++++||++|+++.+ +++||+||.++++++|+.|.+.|+ +||+|+++++|+++++
T Consensus 15 ~~~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~ 93 (562)
T 3ite_A 15 QYTSTVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAF 93 (562)
T ss_dssp ---CCCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHH
T ss_pred eecccCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHH
Confidence 44568999999999999999999999743 789999999999999999999999 7999999999999999
Q ss_pred HHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccC
Q 046637 79 ELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASS 158 (301)
Q Consensus 79 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 158 (301)
+++|||+++|++++|++|.++.+++.+++++++++++|+++....... .. ....++..+
T Consensus 94 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~-----~~----~~~~~~~~~------------ 152 (562)
T 3ite_A 94 AIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVE-----LP----PETKVLDTK------------ 152 (562)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCC-----CC----TTCEEEETT------------
T ss_pred HHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccc-----cC----ccceeeccc------------
Confidence 999999999999999999999999999999999999999866543210 00 111122111
Q ss_pred CCCccHHHHHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH--------hhCCCCCEEEEe
Q 046637 159 SGNLEYESLLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF--------NEMGLMPTYLWC 230 (301)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~--------~~~~~~~~~l~~ 230 (301)
...+.+...............++++++|+|||||||.||||++||.++.......... ..+...+++++.
T Consensus 153 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (562)
T 3ite_A 153 --NQSFIENLSTQDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCL 230 (562)
T ss_dssp --CHHHHHHHHHSCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECC
T ss_pred --chhhhhhcccccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEe
Confidence 1234444333333333334567888999999999999999999999998877665443 346788999999
Q ss_pred ccchhhhhhHHHHHHHHhCCeEEeeCCCC-HHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 231 VPMFHCNGWCLTWAVAAQGGTNVCQRTVN-AKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 231 ~p~~h~~g~~~~~~~l~~g~~~v~~~~~~-~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
.|++|..++..++.++..|+++++.+.+. +..+++.++++++|++.++|++++.+...
T Consensus 231 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~ 289 (562)
T 3ite_A 231 ASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV 289 (562)
T ss_dssp SCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC
T ss_pred cCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC
Confidence 99999998888888999999999887554 57789999999999999999999887544
No 31
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=8.2e-38 Score=282.89 Aligned_cols=243 Identities=19% Similarity=0.188 Sum_probs=198.7
Q ss_pred CCCCCCCCHHHHHHHHhhhcCC-ccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhh
Q 046637 8 SANYVPLTPISFLERSAVVYRD-RPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPM 86 (301)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~-~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 86 (301)
+..+..+++.+.|.++++++|+ ++|+++.++++||+||.++++++|..|. .|++|+++++|+++++++++||++
T Consensus 16 ~~~~~~~tl~~~l~~~a~~~p~d~~Al~~~~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~ 90 (505)
T 3nyq_A 16 PRGSHMSSLFPALSPAPTGAPADRPALRFGERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALL 90 (505)
T ss_dssp --------CCTTTSSCCCSGGGGSEEEEETTEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHH
T ss_pred cCCcccchhHHHHHHHHHhCCCCCeEEEECCeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3344567788899999999987 9999999999999999999999998774 388999999999999999999999
Q ss_pred ccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccCCCCCCcccccCCCCccHHH
Q 046637 87 AGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPECGEPVSTVASSSGNLEYES 166 (301)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (301)
+|++++|++|.++.+++.+++++++++++|++...... .... .++.+ .++...
T Consensus 91 ~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~-----~~~~----~~~~~-~~~~~~----------------- 143 (505)
T 3nyq_A 91 AGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELP-----PALG----ALERV-DVDVRA----------------- 143 (505)
T ss_dssp HTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC-----GGGT----TSEEE-ECCTTC-----------------
T ss_pred hCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccc-----hhhc----ccccc-cccccc-----------------
Confidence 99999999999999999999999999999998652110 0000 12221 111110
Q ss_pred HHhhccccccCCCCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHH-HHHH
Q 046637 167 LLAIGKLREVRRPKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCL-TWAV 245 (301)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~-~~~~ 245 (301)
..........++++++|+|||||||.||||+++|.++..........+++.++|++++.+|++|.+|+.. ++.+
T Consensus 144 -----~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 218 (505)
T 3nyq_A 144 -----RGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGP 218 (505)
T ss_dssp -----CCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHH
T ss_pred -----ccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHH
Confidence 0001123356789999999999999999999999999999998888899999999999999999999874 7899
Q ss_pred HHhCCeEEeeCCCCHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 246 AAQGGTNVCQRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 246 l~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
+..|+++++.+.+++..+++.+ ++++|+++++|+++..|++.
T Consensus 219 l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~ 260 (505)
T 3nyq_A 219 LRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAET 260 (505)
T ss_dssp HHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHH
T ss_pred HhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHh
Confidence 9999999999999999999999 88999999999999999873
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.83 E-value=8.8e-21 Score=163.89 Aligned_cols=114 Identities=11% Similarity=0.042 Sum_probs=100.0
Q ss_pred CCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeCCCCHH
Q 046637 182 ECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQRTVNAK 261 (301)
Q Consensus 182 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~~~~~~ 261 (301)
.+++++|+|||||||.||||++||.++.+++......+++.++|++++.+|++|.+|+..++.++..|+++++.+.. .
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~--~ 113 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPT--A 113 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCC--S
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcc--c
Confidence 47899999999999999999999999999999988899999999999999999999999889999999999988632 2
Q ss_pred HHHHHHHhcCcceecCChHHHHHHHcCCCCccccccC
Q 046637 262 EIFDNITRHKVTHFGGAPTVLNMIANAPPVFENRFRG 298 (301)
Q Consensus 262 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 298 (301)
+.++.++++++|++.++|++++.|++.+... .++++
T Consensus 114 ~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~~-~~l~~ 149 (358)
T 4gs5_A 114 NPLAGLDHADFDFVAMVPMQLQSILENSATS-GQVDR 149 (358)
T ss_dssp CTTTTCSSCCCSEEEECHHHHHHHHHCTTTG-GGGGG
T ss_pred cHHHHHHHhCCeEEEcChHHHHHhhcccccc-ccCCc
Confidence 3467889999999999999999999876543 34443
No 33
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.72 E-value=6.8e-18 Score=146.56 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=93.4
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHH---HHHhhCCCCCEEEEeccc-hhhhhhHHHHHHHHhCCeEEee
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAA---ALFNEMGLMPTYLWCVPM-FHCNGWCLTWAVAAQGGTNVCQ 255 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~-~h~~g~~~~~~~l~~g~~~v~~ 255 (301)
..++++++|+|||||||.||+|+++|.++....... ....++.++|++++..|+ +|.+|+...+.++..|+ +++.
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v~~ 166 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGG-MFFS 166 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CEEC
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCC-EEEC
Confidence 467889999999999999999999999998877743 345567889999999999 99999888777788899 6777
Q ss_pred CCCCHH-----------------------HHHHHHHhcCcceecCChHHHHHHHcCCC
Q 046637 256 RTVNAK-----------------------EIFDNITRHKVTHFGGAPTVLNMIANAPP 290 (301)
Q Consensus 256 ~~~~~~-----------------------~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 290 (301)
.+++|. .+++.++++++|++.++|+++..|++.+.
T Consensus 167 ~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~ 224 (369)
T 3hgu_A 167 IDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPE 224 (369)
T ss_dssp CCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHH
T ss_pred ccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhh
Confidence 778888 88889999999999999999999998743
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.72 E-value=2.5e-17 Score=146.13 Aligned_cols=111 Identities=13% Similarity=-0.020 Sum_probs=97.5
Q ss_pred CCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhhCCCCCEEEEeccc-hhhhhhHHHHHHHHhCCeEEe
Q 046637 179 PKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAA---LFNEMGLMPTYLWCVPM-FHCNGWCLTWAVAAQGGTNVC 254 (301)
Q Consensus 179 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~-~h~~g~~~~~~~l~~g~~~v~ 254 (301)
...++++++|+|||||||.||+|++||.++........ ..+++.++|++++..|+ +|..++...+.++..|+++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 35668899999999999999999999999877654433 35678899999999998 788888778889999999999
Q ss_pred eCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 255 QRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
.+.+++..+++.++++++|+++++|+++..|++..
T Consensus 166 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~ 200 (437)
T 2y27_A 166 FGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEI 200 (437)
T ss_dssp CCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHH
Confidence 88889999999999999999999999999998753
No 35
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.71 E-value=2.9e-17 Score=145.68 Aligned_cols=110 Identities=17% Similarity=0.124 Sum_probs=95.4
Q ss_pred CCC-CCceEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhhCCCCCEEEEeccchhhhhhH-HHHHHHHhCCeEEe
Q 046637 180 KDE-CDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAA---LFNEMGLMPTYLWCVPMFHCNGWC-LTWAVAAQGGTNVC 254 (301)
Q Consensus 180 ~~~-~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~g~~~v~ 254 (301)
..+ +++++|+|||||||.||+|++||.++........ ..+++.++|++++..|+.|..+.. ..+.++..|+++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 161 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVP 161 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEe
Confidence 445 8899999999999999999999999977665543 344788999999999997666544 57888999999999
Q ss_pred eCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 255 QRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
.+.+++..+++.|+++++|+++++|+++..|++..
T Consensus 162 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 196 (436)
T 3qov_A 162 AAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVF 196 (436)
T ss_dssp CCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHH
Confidence 98889999999999999999999999999998763
No 36
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.71 E-value=5.8e-17 Score=144.05 Aligned_cols=111 Identities=13% Similarity=0.011 Sum_probs=97.0
Q ss_pred CCCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHH---HHhhCCCCCEEEEeccc-hhhhhhHHHHHHHHhCCeEEe
Q 046637 179 PKDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAA---LFNEMGLMPTYLWCVPM-FHCNGWCLTWAVAAQGGTNVC 254 (301)
Q Consensus 179 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~-~h~~g~~~~~~~l~~g~~~v~ 254 (301)
...++++++|+|||||||.||+|++||.++........ ..+++.++|++++..|+ +|..++...+.++..|+++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 35668899999999999999999999999877654433 35678899999999998 677777778888999999999
Q ss_pred eCCCCHHHHHHHHHhcCcceecCChHHHHHHHcCC
Q 046637 255 QRTVNAKEIFDNITRHKVTHFGGAPTVLNMIANAP 289 (301)
Q Consensus 255 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 289 (301)
.+.+++..+++.|+++++|+++++|+++..|++..
T Consensus 168 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~ 202 (443)
T 2y4o_A 168 MSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEM 202 (443)
T ss_dssp CCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHH
Confidence 98889999999999999999999999999998753
No 37
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=95.46 E-value=0.22 Score=43.37 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=80.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPN--VPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
-.+|.+.+...+..++..+...|+.++|++....+- ....+..+++++..|+..++.++ ...+.+...+++.++.++
T Consensus 104 v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 182 (436)
T 3qov_A 104 IVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA-GNSKRQIKFISDFKTTAL 182 (436)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS-CCHHHHHHHHHHHTCCEE
T ss_pred EEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHHCCCEE
Confidence 368999999999889888888999999999998874 34455567888899998887754 477899999999999999
Q ss_pred EEcCCchhhHHHHHHHhccc--cCCCCceEEccC
Q 046637 116 FVDYQLLPIAQGAFEILSKT--SAKLPLLVLVPE 147 (301)
Q Consensus 116 i~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~ 147 (301)
+........+.+........ ..+++.++.-+.
T Consensus 183 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe 216 (436)
T 3qov_A 183 HAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAE 216 (436)
T ss_dssp ECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESS
T ss_pred EECHHHHHHHHHHHHHcCCCcccCCccEEEEeCC
Confidence 98877666555443332211 124555555443
No 38
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=95.45 E-value=0.24 Score=43.11 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=72.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPN--VPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
-.+|.+.+...+..++..+...|+.++|++....+. ....+...++++..|+.+++.++ .+.+.+...+++.++.++
T Consensus 108 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l 186 (437)
T 2y27_A 108 VGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGG-GQTEKQVQLIQDFRPDII 186 (437)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCS-CCHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHhCCCEE
Confidence 368999999888888888888899999999988885 34445567888899998887755 488999999999999999
Q ss_pred EEcCCchhhHHHH
Q 046637 116 FVDYQLLPIAQGA 128 (301)
Q Consensus 116 i~~~~~~~~~~~~ 128 (301)
+........+.+.
T Consensus 187 ~~~Ps~~~~l~~~ 199 (437)
T 2y27_A 187 MVTPSYMLSIADE 199 (437)
T ss_dssp EECHHHHHHHHHH
T ss_pred EECHHHHHHHHHH
Confidence 9877666555443
No 39
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=95.40 E-value=0.25 Score=43.16 Aligned_cols=90 Identities=20% Similarity=0.247 Sum_probs=72.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--HHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNV--PAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
-.+|.+.+...+..++..+...|+.++|++....+-+ ...+...++++..|+.+++.++ ...+.+...+++.++.++
T Consensus 110 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l 188 (443)
T 2y4o_A 110 VGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSG-GQTEKQVQLIRDFEPKII 188 (443)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCS-CCHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCC-CCHHHHHHHHHHhCCcEE
Confidence 3689999998888888888888999999999988853 4445567888889999888765 488899999999999999
Q ss_pred EEcCCchhhHHHH
Q 046637 116 FVDYQLLPIAQGA 128 (301)
Q Consensus 116 i~~~~~~~~~~~~ 128 (301)
+........+.+.
T Consensus 189 ~~~Ps~~~~l~~~ 201 (443)
T 2y4o_A 189 LVTPSYMLNLIDE 201 (443)
T ss_dssp EECHHHHHHHHHH
T ss_pred EECHHHHHHHHHH
Confidence 9877666555443
No 40
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=91.30 E-value=4.1 Score=36.40 Aligned_cols=117 Identities=12% Similarity=-0.024 Sum_probs=77.6
Q ss_pred cCCccEEEEC---------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HH-HHHHhhhccceeeec
Q 046637 27 YRDRPSVVYG---------DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM--YE-LHFGVPMAGAVLCTL 94 (301)
Q Consensus 27 ~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~-~~lA~~~~G~~~v~l 94 (301)
.|+.+|++.. +-.+|.+.+...+..... ..++.++|++....|-.-.+ .. .+++++..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVE---VCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHH---HHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 3566666641 147899988877665544 34788999998888865333 22 478888889888776
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccC
Q 046637 95 NTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPE 147 (301)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 147 (301)
+ ....+.+...+++.++.+++........+.+..........+++.++.-+.
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~ 308 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGA 308 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESS
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCC
Confidence 4 578899999999999999988776665544433222211124565555443
No 41
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=90.55 E-value=0.73 Score=39.00 Aligned_cols=86 Identities=14% Similarity=-0.013 Sum_probs=62.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC--CHHHHHHHHHhhhccceeeecCCCCCHH--------------
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPN--VPAMYELHFGVPMAGAVLCTLNTRHDSA-------------- 101 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~-------------- 101 (301)
..+|.+.+...+..++..+...|+.++|++....+- ........+++...|+.+++. ...+.
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~--~~dp~~~~~~~~~~~~~~~ 186 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSI--DIDPRWVKRSLSEGDTATV 186 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECC--CCCHHHHHHHHHTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECc--cCChHHHHHhhcccchhhh
Confidence 368999999888877777788899999999998886 223344455558888855554 33444
Q ss_pred ---------HHHHHHHhcCceEEEEcCCchhhH
Q 046637 102 ---------MVSVLLRHSEAKIIFVDYQLLPIA 125 (301)
Q Consensus 102 ---------~l~~~l~~~~~~~vi~~~~~~~~~ 125 (301)
.+.+.+++.++.+++........+
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 187 RKYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 666799999999998876655443
No 42
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=90.44 E-value=3.4 Score=36.99 Aligned_cols=117 Identities=10% Similarity=0.024 Sum_probs=77.2
Q ss_pred cCCccEEEEC--C-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHH---HHHHhhhccceeeec
Q 046637 27 YRDRPSVVYG--D-------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYE---LHFGVPMAGAVLCTL 94 (301)
Q Consensus 27 ~~~~~al~~~--~-------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~l 94 (301)
.++.+|++.. | -.+|.+.+...+...... .++.++|++....|..-.+-. .+++.+..|+..+..
T Consensus 189 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 265 (544)
T 3o83_A 189 PADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMA 265 (544)
T ss_dssp CTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEEC
Confidence 3566666641 1 468999998877666543 488999999988876544322 367788888877776
Q ss_pred CCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEEccC
Q 046637 95 NTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVLVPE 147 (301)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 147 (301)
+ ....+.+...+++.++.++.........+.+..........+++.++.-+.
T Consensus 266 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~ 317 (544)
T 3o83_A 266 P-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGA 317 (544)
T ss_dssp S-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESS
T ss_pred C-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCC
Confidence 4 568888999999999999988776555443332211111125566555443
No 43
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=89.96 E-value=1.9 Score=38.68 Aligned_cols=100 Identities=12% Similarity=0.011 Sum_probs=72.6
Q ss_pred CCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-C
Q 046637 182 ECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-T 257 (301)
Q Consensus 182 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~ 257 (301)
++.++++.+..+.++ ..+|+..|...+......+ ++.++|++...+|-+- --+...++++..|+..+.+. .
T Consensus 34 p~~~a~~a~~~~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~ 108 (550)
T 3rix_A 34 ALVPGTIAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSL-QFFMPVLGALFIGVAVAPANDI 108 (550)
T ss_dssp HTSTTCEEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCT-TTHHHHHHHHHHTCEEEECCTT
T ss_pred CCCceEEEeeecCCC----cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcc-cHHHHHHHHHHcCCEEeecCCc
Confidence 345555544444333 4799999987776665544 6889999988888543 22334688899999988875 6
Q ss_pred CCHHHHHHHHHhcCcceecCChHHHHHHH
Q 046637 258 VNAKEIFDNITRHKVTHFGGAPTVLNMIA 286 (301)
Q Consensus 258 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 286 (301)
..++.+...++..+++.+++.+.....+.
T Consensus 109 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 137 (550)
T 3rix_A 109 YNERELLNSMNISQPTVVFVSKKGLQKIL 137 (550)
T ss_dssp CCHHHHHHHHHHHCCSEEEECGGGHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEcHHHHHHHH
Confidence 78899999999999999998887665543
No 44
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=89.43 E-value=4.4 Score=35.96 Aligned_cols=105 Identities=15% Similarity=0.111 Sum_probs=69.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM--YELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
-.+|.+.+...+..+... .++.++|++....|-.-.. ...+++++ .|+..+.. +....+.+...+++.++.++
T Consensus 188 V~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 262 (517)
T 3r44_A 188 VVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISM-PQFDATKVWSLIVEERVCIG 262 (517)
T ss_dssp EEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEEC-SSCCHHHHHHHHHHTTCCEE
T ss_pred eeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEe-CCCCHHHHHHHHHHhCCeEE
Confidence 468999988877766544 4889999999888875433 22345555 78777766 56789999999999999999
Q ss_pred EEcCCchhhHHHHHHHhccccCCCCceEEccC
Q 046637 116 FVDYQLLPIAQGAFEILSKTSAKLPLLVLVPE 147 (301)
Q Consensus 116 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 147 (301)
.........+.+.........++++.++.-+.
T Consensus 263 ~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe 294 (517)
T 3r44_A 263 GAVPAILNFMRQVPEFAELDAPDFRYFITGGA 294 (517)
T ss_dssp EECHHHHHHHHHSHHHHHCCCTTCCEEEECSS
T ss_pred EeHHHHHHHHHhCcccccCCCCcccEEEECCC
Confidence 88776665544332221111124555555443
No 45
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=88.94 E-value=2.8 Score=37.64 Aligned_cols=95 Identities=16% Similarity=0.194 Sum_probs=68.6
Q ss_pred CccEEEEC---------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HHHHHHhhhccceeeecCCC
Q 046637 29 DRPSVVYG---------DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM--YELHFGVPMAGAVLCTLNTR 97 (301)
Q Consensus 29 ~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~ 97 (301)
+.+|++.. +-.+|.+.+...+......+...++.++|++....|-.-.+ ...+++.+ .|+..+..+ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 66777652 24789999887766655443336889999988887765332 33356667 888887774 5
Q ss_pred CCHHHHHHHHHhcCceEEEEcCCchhhH
Q 046637 98 HDSAMVSVLLRHSEAKIIFVDYQLLPIA 125 (301)
Q Consensus 98 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (301)
...+.+...+++.++.+++........+
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l 297 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAIL 297 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 7889999999999999999876655443
No 46
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.63 E-value=4.9 Score=35.43 Aligned_cols=96 Identities=10% Similarity=0.105 Sum_probs=70.2
Q ss_pred cCCccEEEEC---------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCC
Q 046637 27 YRDRPSVVYG---------DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNT 96 (301)
Q Consensus 27 ~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 96 (301)
.++.+|++.. +-.+|.+.+...+..+.. ..++.++|++....|-.-. .+..+++++..|+..+..+
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 236 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD- 236 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-
Confidence 4566776651 146899998877766543 4588999999988876432 3444677888898877765
Q ss_pred CCCHHHHHHHHHhcCceEEEEcCCchhhHH
Q 046637 97 RHDSAMVSVLLRHSEAKIIFVDYQLLPIAQ 126 (301)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 126 (301)
..+.+.+...+++.++.+++........+.
T Consensus 237 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 266 (501)
T 3ipl_A 237 KFNAEQILTMIKNERITHISLVPQTLNWLM 266 (501)
T ss_dssp SCCHHHHHHHHHHSCCCEEEECHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEchHHHHHHHH
Confidence 578999999999999999988766555443
No 47
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=86.59 E-value=8.6 Score=34.36 Aligned_cols=103 Identities=9% Similarity=-0.129 Sum_probs=72.7
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
.++.++++....+.. .-....+|+..|...+..+...+ ++.++|++...+|-+. --....++++..|+..+.+.
T Consensus 32 ~p~~~A~~~~~~~~~-~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~ 109 (549)
T 3g7s_A 32 FGEKTAIISAEPKFP-SEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSI-DYVMTIYALWRVAATPVPINP 109 (549)
T ss_dssp HTTSEEEEEESSCCC-CSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEeCCCccc-ccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEEccCC
Confidence 356666665432111 11235789999987776665544 6789999988887543 22334688899999988885
Q ss_pred CCCHHHHHHHHHhcCcceecCChHHHHHH
Q 046637 257 TVNAKEIFDNITRHKVTHFGGAPTVLNMI 285 (301)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 285 (301)
...++.+...++..+++.+++.+.....+
T Consensus 110 ~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 110 MYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 67788999999999999999887665544
No 48
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=86.48 E-value=6.4 Score=35.16 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=70.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIF 116 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (301)
-.+|.+.+...+.... .....++.++|++....|-.-. .....++++..|+..+..++..+++.+...+++.++.+++
T Consensus 194 V~~sh~~l~~~~~~~~-~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~ 272 (541)
T 1v25_A 194 VVYSHRALVLHSLAAS-LVDGTALSEKDVVLPVVPMFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTA 272 (541)
T ss_dssp EEEEHHHHHHHHHHTT-STTTTCCCTTCEEEECSCTTSHHHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEE
T ss_pred eeeehHHHHHHHhhhh-hcccccCCCCCEEEEeccchhhhHHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEe
Confidence 3689988765443211 1123478899999888876433 2234567788898888877667899999999999999999
Q ss_pred EcCCchhhHHHHHHHhccccCCCCceEEcc
Q 046637 117 VDYQLLPIAQGAFEILSKTSAKLPLLVLVP 146 (301)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 146 (301)
........+.+..........+++.++.-.
T Consensus 273 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG 302 (541)
T 1v25_A 273 GVPTVWLALADYLESTGHRLKTLRRLVVGG 302 (541)
T ss_dssp ECHHHHHHHHHHHHHHTCCCSSCCEEEECS
T ss_pred cchHHHHHHHhhhhccCCcchhccEEEECC
Confidence 877666555443332221112456555544
No 49
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=85.53 E-value=6.5 Score=35.04 Aligned_cols=98 Identities=8% Similarity=0.025 Sum_probs=70.5
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR 256 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~ 256 (301)
..++.++++. +.+| ..+|+..+...+......+ ++.++|++...+|-.- --+...++++..|+..+.+.
T Consensus 34 ~~p~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~la~~~~Gav~vpl~ 105 (536)
T 3ni2_A 34 NHSSKPCLIN---GANG----DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSP-EFVLAFLGASHRGAIITAAN 105 (536)
T ss_dssp GSTTSEEEEE---TTTC----CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH-HHHHHHHHHHHHTCEEEECC
T ss_pred cCCCceEEEE---CCCC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCEEeccC
Confidence 3456676653 2222 5689999987766665544 6789999988888643 22334688899999988875
Q ss_pred -CCCHHHHHHHHHhcCcceecCChHHHHHH
Q 046637 257 -TVNAKEIFDNITRHKVTHFGGAPTVLNMI 285 (301)
Q Consensus 257 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 285 (301)
...++.+...++..++..+++.+.....+
T Consensus 106 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 135 (536)
T 3ni2_A 106 PFSTPAELAKHAKASRAKLLITQACYYEKV 135 (536)
T ss_dssp TTCCHHHHHHHHHHHTEEEEEECGGGTHHH
T ss_pred CCCCHHHHHHHHHhcCCEEEEEChHHHHHH
Confidence 56788999999999999998877554443
No 50
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=85.41 E-value=6.9 Score=34.54 Aligned_cols=94 Identities=15% Similarity=-0.072 Sum_probs=70.6
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
.++.++++. .+..+|+..|...+......+ ++.++|++...+|-.- --....++++..|+..+.+.
T Consensus 19 ~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~ 88 (509)
T 3ivr_A 19 FPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCS-EMIELIGAVALIGAILLPVNY 88 (509)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecCC
Confidence 456666654 136799999988777666554 6789999988887543 22334688899999988875
Q ss_pred CCCHHHHHHHHHhcCcceecCChHHHHH
Q 046637 257 TVNAKEIFDNITRHKVTHFGGAPTVLNM 284 (301)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 284 (301)
...++.+...++..++..+++.+.....
T Consensus 89 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 89 RLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 5678899999999999999988776555
No 51
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=84.77 E-value=20 Score=32.52 Aligned_cols=87 Identities=9% Similarity=0.047 Sum_probs=63.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH--HH-HHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM--YE-LHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~--~~-~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
-.+|.+.+...+...... .++.+++++....+-...+ .. .+++++..|+..+..+ ......+...+++.++.+
T Consensus 202 V~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~ 277 (617)
T 3rg2_A 202 IPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA-DPSATLCFPLIEKHQVNV 277 (617)
T ss_dssp EEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECS-SCCHHHHHHHHHHTTCCE
T ss_pred eehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCcE
Confidence 478999888777665443 4788999999988855433 22 3677788888777764 467888889999999999
Q ss_pred EEEcCCchhhHHHH
Q 046637 115 IFVDYQLLPIAQGA 128 (301)
Q Consensus 115 vi~~~~~~~~~~~~ 128 (301)
+.........+.+.
T Consensus 278 ~~~~P~~~~~l~~~ 291 (617)
T 3rg2_A 278 TALVPPAVSLWLQA 291 (617)
T ss_dssp EEECHHHHHHHHHH
T ss_pred EEcchHHHHHHHHh
Confidence 98877665554443
No 52
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=83.86 E-value=12 Score=32.96 Aligned_cols=94 Identities=13% Similarity=-0.094 Sum_probs=67.6
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
.++.++.++...+ +-.+|+..|...+......+ ++.++|++...+|-+- --+...++++..|+..+.+.
T Consensus 13 ~p~~~a~~~~~~~------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~ 85 (503)
T 4fuq_A 13 LDDPHKLAIETAA------GDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSV-EALVLYLATVRAGGVYLPLNT 85 (503)
T ss_dssp CSCTTSEEEEETT------CCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCT
T ss_pred CCCCceEEEecCC------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEecCC
Confidence 3445555544322 24699999987776665544 6789999988887543 22334688899999988875
Q ss_pred CCCHHHHHHHHHhcCcceecCChHH
Q 046637 257 TVNAKEIFDNITRHKVTHFGGAPTV 281 (301)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~~~~~P~~ 281 (301)
...++.+...++..++..+++.+..
T Consensus 86 ~~~~~~l~~il~~~~~~~vi~~~~~ 110 (503)
T 4fuq_A 86 AYTLHELDYFITDAEPKIVVCDPSK 110 (503)
T ss_dssp TCCHHHHHHHHHHHCCSEEEECGGG
T ss_pred CCCHHHHHHHHHhcCCcEEEECchh
Confidence 5678899999999999999887643
No 53
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=82.92 E-value=3.1 Score=36.88 Aligned_cols=83 Identities=13% Similarity=0.080 Sum_probs=62.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCCC--CCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNTR--HDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (301)
-.+|.+.+...+..... ..++.++|++....|-+.. .+..+++++..|+..+.+++. ..++.+...+++.++.+
T Consensus 162 v~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 238 (512)
T 3fce_A 162 VQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQV 238 (512)
T ss_dssp EEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCE
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcE
Confidence 46899988877665543 4588999999998886543 344577888889888877653 57788999999999998
Q ss_pred EEEcCCchh
Q 046637 115 IFVDYQLLP 123 (301)
Q Consensus 115 vi~~~~~~~ 123 (301)
++.......
T Consensus 239 ~~~~P~~~~ 247 (512)
T 3fce_A 239 WTSTPSFAE 247 (512)
T ss_dssp EEECHHHHH
T ss_pred EEecHHHHH
Confidence 888755443
No 54
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=82.69 E-value=14 Score=33.20 Aligned_cols=84 Identities=11% Similarity=-0.035 Sum_probs=64.0
Q ss_pred eeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCCHHHHHHHHHhcCcceec
Q 046637 201 VICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFG 276 (301)
Q Consensus 201 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 276 (301)
..+|+..|...+......+ ++.++|++...+|-.- --....++++..|+..+.+. ...++.+...++..++..++
T Consensus 63 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li 141 (563)
T 1amu_A 63 EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSI-DLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLL 141 (563)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEE
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEE
Confidence 4799999987766655543 6789999988887543 22334688899999988875 56788999999999999999
Q ss_pred CChHHHHHH
Q 046637 277 GAPTVLNMI 285 (301)
Q Consensus 277 ~~P~~~~~l 285 (301)
+.+.....+
T Consensus 142 ~~~~~~~~~ 150 (563)
T 1amu_A 142 TQKHLVHLI 150 (563)
T ss_dssp ECGGGHHHH
T ss_pred EcCchhhhh
Confidence 888665544
No 55
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=82.63 E-value=12 Score=33.80 Aligned_cols=94 Identities=12% Similarity=0.054 Sum_probs=69.2
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
.++.+|++.... .| ....+|+..|...+......+ ++.++|++...+|-.- --+...++++..|+..+.+.
T Consensus 69 ~pd~~Al~~~~~--~g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~-e~~~~~lA~~~~Gav~vpl~~ 143 (580)
T 3etc_A 69 SPEKLAMIWCDD--YG--NEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRY-DFWYCMLGLHKLGAIAVPATH 143 (580)
T ss_dssp CTTCEEEEEEES--SS--CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCT-HHHHHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEEEcC--CC--CEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhCCEEEEeCCc
Confidence 567778776532 12 357899999987766655544 6889999998888543 22334688899999988775
Q ss_pred CCCHHHHHHHHHhcCcceecCCh
Q 046637 257 TVNAKEIFDNITRHKVTHFGGAP 279 (301)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~~~~~P 279 (301)
...++.+...++..++..+++.+
T Consensus 144 ~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 144 MLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp TCCHHHHHHHHHHHTCCEEEEES
T ss_pred cCCHHHHHHHHHhcCCCEEEEec
Confidence 67889999999999999988754
No 56
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=82.45 E-value=16 Score=32.91 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=71.8
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh----hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN----EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~ 256 (301)
.++.++++.... .| ....+|+..|...+......+ ++.++|++...+|-.- --+...++++..|+..+.+.
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Ga~~vpl~ 130 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVP-EWWLVILGCIRAGLIFMPGT 130 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCH-HHHHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecC
Confidence 556777765421 12 246799999987776665544 6678999888887543 22334688899999988875
Q ss_pred -CCCHHHHHHHHHhcCcceecCChHHHHHH
Q 046637 257 -TVNAKEIFDNITRHKVTHFGGAPTVLNMI 285 (301)
Q Consensus 257 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 285 (301)
...++.+...++..++..+++.+.....+
T Consensus 131 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 131 IQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 56788999999999999998877665544
No 57
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=82.08 E-value=14 Score=32.02 Aligned_cols=108 Identities=8% Similarity=-0.054 Sum_probs=74.8
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHhhC--CCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFNEM--GLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~--~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
..++.+|++.........-....+|+..|...+..+...+.- .++|++...++-.- --+...++++..|+..|.+.
T Consensus 36 ~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~ 114 (480)
T 3t5a_A 36 LQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGSTGDRVVISAPQGL-EYVVAFLGALQAGRIAVPLSV 114 (480)
T ss_dssp HSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred hCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCEEEEEcCCcH-HHHHHHHHHHHhCcEEEeeCC
Confidence 346677776654221111234789999998887777665531 37888888777543 22334688899999988875
Q ss_pred ---CCCHHHHHHHHHhcCcceecCChHHHHHHHcC
Q 046637 257 ---TVNAKEIFDNITRHKVTHFGGAPTVLNMIANA 288 (301)
Q Consensus 257 ---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 288 (301)
....+++...++..++..+++.+.....+.+.
T Consensus 115 ~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~ 149 (480)
T 3t5a_A 115 PQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQH 149 (480)
T ss_dssp CCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHT
T ss_pred CCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHH
Confidence 34567889999999999999988877766543
No 58
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=81.87 E-value=17 Score=32.01 Aligned_cols=97 Identities=13% Similarity=-0.029 Sum_probs=68.4
Q ss_pred CCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-
Q 046637 181 DECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR- 256 (301)
Q Consensus 181 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~- 256 (301)
.++.++++.. . .+..+|+..|...+......+ ++.++|++...+|-.-- -+...++++..|+..+.++
T Consensus 15 ~p~~~a~~~~---~----~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~ 86 (504)
T 1t5h_X 15 APDHCALAVP---A----RGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSAD-VVIAILALHRLGAVPALLNP 86 (504)
T ss_dssp CTTSEEEEET---T----TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHH-HHHHHHHHHHHTCEEEEECT
T ss_pred CCCceEEEEc---C----CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCcEEEecCC
Confidence 4556666532 1 236799999987766665544 67889999888875432 2334688899999988875
Q ss_pred CCCHHHHHHHHHhcCcceecC--ChHHHHHH
Q 046637 257 TVNAKEIFDNITRHKVTHFGG--APTVLNMI 285 (301)
Q Consensus 257 ~~~~~~~~~~i~~~~~t~~~~--~P~~~~~l 285 (301)
...++.+...+++.+++.+++ .+.....+
T Consensus 87 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 87 RLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred ccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 567889999999999999888 66555544
No 59
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=81.70 E-value=17 Score=33.24 Aligned_cols=94 Identities=13% Similarity=-0.072 Sum_probs=68.3
Q ss_pred CCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHH---hhCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEee-CC
Q 046637 182 ECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALF---NEMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQ-RT 257 (301)
Q Consensus 182 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~-~~ 257 (301)
++.+|++.. +..+| ....+|+..|...+..+... .++.++|++...+|..-- -....++++..|+..+.+ +.
T Consensus 90 pd~~Al~~~-~~~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e-~vva~lA~~~~Gav~vpl~~~ 165 (652)
T 1pg4_A 90 GDRTAIIWE-GDDTS--QSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPE-AAVAMLACARIGAVHSVIFGG 165 (652)
T ss_dssp TTSEEEEEE-CSSTT--CEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHH-HHHHHHHHHHHTCEEEECCTT
T ss_pred CCceEEEEE-cCCCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCcEEEecCCC
Confidence 566676643 22122 34679999998776665554 468899999998886532 233568889999988877 47
Q ss_pred CCHHHHHHHHHhcCcceecCCh
Q 046637 258 VNAKEIFDNITRHKVTHFGGAP 279 (301)
Q Consensus 258 ~~~~~~~~~i~~~~~t~~~~~P 279 (301)
+.++.+...++..++..+++..
T Consensus 166 ~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 166 FSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp SCHHHHHHHHHHHTCSEEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999888754
No 60
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=81.21 E-value=10 Score=34.16 Aligned_cols=96 Identities=7% Similarity=-0.045 Sum_probs=68.9
Q ss_pred cCCccEEEEC---------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHH--HHHHHhhhccceeeecC
Q 046637 27 YRDRPSVVYG---------DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMY--ELHFGVPMAGAVLCTLN 95 (301)
Q Consensus 27 ~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~ 95 (301)
.++.+|++.. +-.+|.+.+...+..... ..++.++|++....|-.-.+- ..+++.+..|+..+...
T Consensus 165 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 241 (590)
T 3kxw_A 165 KSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMS 241 (590)
T ss_dssp CTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECC
T ss_pred CCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeC
Confidence 3566676651 147899999888776644 458899999999888765433 33678888998888776
Q ss_pred CCC---CHHHHHHHHHhcCceEEEEcCCchhhH
Q 046637 96 TRH---DSAMVSVLLRHSEAKIIFVDYQLLPIA 125 (301)
Q Consensus 96 ~~~---~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (301)
+.. .++.+...+++.++.++.........+
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 274 (590)
T 3kxw_A 242 PFSFLQNPLSWLKHITKYKATISGSPNFAYDYC 274 (590)
T ss_dssp HHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHhCCeeecCChhHHHHH
Confidence 542 567888899999999887765444443
No 61
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=81.19 E-value=17 Score=33.41 Aligned_cols=97 Identities=10% Similarity=0.007 Sum_probs=69.9
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh----hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEee
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN----EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQ 255 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~ 255 (301)
..++.+|++... ...| ....+|+..|...+......+ ++.++|++...+|..- -.....++++..|+..+.+
T Consensus 94 ~~pd~~Al~~~~-~~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~-e~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 94 KTPNKKAIIFEG-DEPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVP-EAIITLLAISRIGAIHSVV 169 (663)
T ss_dssp TCTTSEEEEEEC-SSTT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSH-HHHHHHHHHHHTTCEEEEC
T ss_pred cCCCceEEEEEc-CCCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEee
Confidence 345677776442 2122 346799999987776665544 5678999999988643 2233468889999988877
Q ss_pred -CCCCHHHHHHHHHhcCcceecCChH
Q 046637 256 -RTVNAKEIFDNITRHKVTHFGGAPT 280 (301)
Q Consensus 256 -~~~~~~~~~~~i~~~~~t~~~~~P~ 280 (301)
+.+.++.+...++..++.++++.+.
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 4788999999999999999987653
No 62
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=80.37 E-value=6.5 Score=34.78 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=62.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCCC--CCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNTR--HDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (301)
-.+|.+.+...+..+.. ..++.++|++....|-+.. .+..+++++..|+..+..+.. ...+.+...+++.++.+
T Consensus 161 V~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 237 (511)
T 3e7w_A 161 VQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNV 237 (511)
T ss_dssp EEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSE
T ss_pred EEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcE
Confidence 46899998877665543 4578899999988886543 344578888899888777543 56788999999999998
Q ss_pred EEEcCCchhh
Q 046637 115 IFVDYQLLPI 124 (301)
Q Consensus 115 vi~~~~~~~~ 124 (301)
++........
T Consensus 238 ~~~~P~~~~~ 247 (511)
T 3e7w_A 238 WTSTPSFVQM 247 (511)
T ss_dssp EEECHHHHHH
T ss_pred EEecHHHHHH
Confidence 8887655443
No 63
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=79.77 E-value=0.81 Score=41.60 Aligned_cols=31 Identities=13% Similarity=-0.070 Sum_probs=27.1
Q ss_pred CCCCCceEEEeccCCC-CCCCeeeechHHHHH
Q 046637 180 KDECDPIALNYTSGTT-SSPKGVICSHRGAYL 210 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtT-G~pK~v~~s~~~l~~ 210 (301)
..++.+.++.-||||| |+||-+.+|...+-.
T Consensus 96 l~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 96 LSAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp SCSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 5667788999999999 789999999998765
No 64
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=78.19 E-value=20 Score=32.07 Aligned_cols=80 Identities=6% Similarity=-0.192 Sum_probs=61.2
Q ss_pred eeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCCHHHHHHHHHhcCcceec
Q 046637 201 VICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFG 276 (301)
Q Consensus 201 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 276 (301)
-.+|+..|...+......+ ++.++|++...+|-..- -....++++..|+..+.+. ...++.+...++..++..++
T Consensus 99 ~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 177 (570)
T 4gr5_A 99 DELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFD-MVVALLAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLV 177 (570)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH-HHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEE
T ss_pred CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEE
Confidence 4699999987776665544 67899999888875432 2334688899999988875 56788999999999999998
Q ss_pred CChHH
Q 046637 277 GAPTV 281 (301)
Q Consensus 277 ~~P~~ 281 (301)
+....
T Consensus 178 ~~~~~ 182 (570)
T 4gr5_A 178 TSRPL 182 (570)
T ss_dssp ECTTT
T ss_pred ecchh
Confidence 76543
No 65
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=78.11 E-value=13 Score=33.04 Aligned_cols=84 Identities=6% Similarity=-0.154 Sum_probs=63.5
Q ss_pred eeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCCHHHHHHHHHhcCcceec
Q 046637 201 VICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFG 276 (301)
Q Consensus 201 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 276 (301)
..+|+..|...+......+ ++.++|++...+|-.-. -....++++..|+..+.+. ...+.++...++..++..++
T Consensus 47 ~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 125 (529)
T 2v7b_A 47 GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVA-LPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125 (529)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTH-HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEE
T ss_pred CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHH-HHHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEE
Confidence 4689999987776665544 67889999888875432 2334688899999988775 56788999999999999998
Q ss_pred CChHHHHHH
Q 046637 277 GAPTVLNMI 285 (301)
Q Consensus 277 ~~P~~~~~l 285 (301)
+.+.....+
T Consensus 126 ~~~~~~~~~ 134 (529)
T 2v7b_A 126 ASGALVQNV 134 (529)
T ss_dssp EEGGGHHHH
T ss_pred echhhhhHH
Confidence 877655433
No 66
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=77.65 E-value=1.1 Score=40.50 Aligned_cols=32 Identities=19% Similarity=0.060 Sum_probs=27.4
Q ss_pred CCCCCCceEEEeccCCC-CCCCeeeechHHHHH
Q 046637 179 PKDECDPIALNYTSGTT-SSPKGVICSHRGAYL 210 (301)
Q Consensus 179 ~~~~~~~~~i~~TSGtT-G~pK~v~~s~~~l~~ 210 (301)
...++.+.++.-||||| |++|-+.+|...+-.
T Consensus 94 iL~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 94 ILTGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred ccCCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 45667788999999999 789999999998755
No 67
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=77.06 E-value=16 Score=30.31 Aligned_cols=91 Identities=13% Similarity=0.052 Sum_probs=56.5
Q ss_pred CCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHH
Q 046637 28 RDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVS 104 (301)
Q Consensus 28 ~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (301)
+.++++..++. +=|++.- .+..+.....+.| +++|+.|.+....+=.-....++|...|..++.+-|...+.+-.
T Consensus 34 g~~i~~K~E~~~ptGSfK~R--~a~~~i~~a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~ 111 (334)
T 3tbh_A 34 KAKVVLKMECENPMASVKDR--LGFAIYDKAEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERR 111 (334)
T ss_dssp SSEEEEEEGGGSTTSBTHHH--HHHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred CCEEEEEeCCCCCccCcHHH--HHHHHHHHHHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHH
Confidence 34566666552 2244432 1222223344555 48888764444455566667777778898666555555556677
Q ss_pred HHHHhcCceEEEEcCC
Q 046637 105 VLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 105 ~~l~~~~~~~vi~~~~ 120 (301)
..++..++++++++..
T Consensus 112 ~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 112 CLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHCCCEEEEECCC
Confidence 8889999999999764
No 68
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=76.89 E-value=17 Score=35.12 Aligned_cols=95 Identities=13% Similarity=0.016 Sum_probs=69.8
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR 256 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~ 256 (301)
..++.++++.. .+ +..+|+..|...+..+...+ ++.++|++...+|-.- --+...++++..|+..+.+.
T Consensus 73 ~~pd~~Al~~~---~~----~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~-e~~v~~lA~~~~Ga~~vpl~ 144 (979)
T 3tsy_A 73 EFATKPCLING---PT----GHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCP-EFVLSFLAASFRGATATAAN 144 (979)
T ss_dssp GTTTSEEEEET---TT----CCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCH-HHHHHHHHHHHHTCEEEEEC
T ss_pred hCCCCeEEEEC---CC----CcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeC
Confidence 34677776542 22 25789999987766665544 6789999988888642 22334688899999998875
Q ss_pred -CCCHHHHHHHHHhcCcceecCChHHH
Q 046637 257 -TVNAKEIFDNITRHKVTHFGGAPTVL 282 (301)
Q Consensus 257 -~~~~~~~~~~i~~~~~t~~~~~P~~~ 282 (301)
...++.+...+++.++..+++.+...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~vi~~~~~~ 171 (979)
T 3tsy_A 145 PFFTPAEIAKQAKASNTKLIITEARYV 171 (979)
T ss_dssp TTSCHHHHHHHHHHHTEEEEEECSTTT
T ss_pred CCCCHHHHHHHHHHcCCeEEEEChHHH
Confidence 67889999999999999998876543
No 69
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=76.24 E-value=8.5 Score=32.31 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=59.1
Q ss_pred cCCccEEEE---C------CeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCH-HHHHHHHHhhhccceeeecCC
Q 046637 27 YRDRPSVVY---G------DVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVP-AMYELHFGVPMAGAVLCTLNT 96 (301)
Q Consensus 27 ~~~~~al~~---~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 96 (301)
++|.+|++. + +-.+|.+.+...+..++. ..++.++|++....|-.- ..+..++..+..|+..+...+
T Consensus 35 ~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~ 111 (358)
T 4gs5_A 35 LGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEP 111 (358)
T ss_dssp HHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCc
Confidence 456667664 1 147899998877766554 358899999998887643 234445556667776666655
Q ss_pred CCCHHHHHHHHHhcCceEEEEcCCchhh
Q 046637 97 RHDSAMVSVLLRHSEAKIIFVDYQLLPI 124 (301)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (301)
... ....+++.++..+..-......
T Consensus 112 ~~~---~~~~i~~~~~t~~~~~P~~l~~ 136 (358)
T 4gs5_A 112 TAN---PLAGLDHADFDFVAMVPMQLQS 136 (358)
T ss_dssp CSC---TTTTCSSCCCSEEEECHHHHHH
T ss_pred ccc---HHHHHHHhCCeEEEcChHHHHH
Confidence 432 2345677888887776544433
No 70
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=74.41 E-value=1.2 Score=40.21 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=26.8
Q ss_pred CCCCCceEEEeccCCC-CCCCeeeechHHHHH
Q 046637 180 KDECDPIALNYTSGTT-SSPKGVICSHRGAYL 210 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtT-G~pK~v~~s~~~l~~ 210 (301)
..++.+.+..-||||| |++|-+.+|...+-.
T Consensus 90 L~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 90 ISARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp TCSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred cCCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 5667778999999999 779999999998755
No 71
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=71.36 E-value=23 Score=29.32 Aligned_cols=78 Identities=12% Similarity=0.106 Sum_probs=51.6
Q ss_pred eeeHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 39 QYTWKETHQRCVKLA---SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 39 ~~Ty~el~~~~~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
.+++.|......... ..+...++++|++|+|.+..+.-..++.+|....|+.++.++.. ++. ..+.+..+++.+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~--~~r-~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN--QDK-LNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC--HHH-HHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc--HHH-hhhhhhcCCeEE
Confidence 567776544433332 23555689999999999987777777777777777777766443 333 456677788777
Q ss_pred EEcC
Q 046637 116 FVDY 119 (301)
Q Consensus 116 i~~~ 119 (301)
+-..
T Consensus 213 i~~~ 216 (348)
T 4eez_A 213 INSG 216 (348)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 6543
No 72
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=69.94 E-value=21 Score=29.76 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=58.3
Q ss_pred CCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHH
Q 046637 28 RDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVS 104 (301)
Q Consensus 28 ~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (301)
+-++++..++. +=|++. +-+...-..+.+.| +++|.+..+....+=.-....++|...|..++.+=|...+.+-.
T Consensus 49 G~~IylK~E~lnptGSfK~--RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~ 126 (344)
T 3vc3_A 49 GAYVAVKQEMMQPTASIAD--RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERR 126 (344)
T ss_dssp CSEEEEEEGGGSTTSBTTH--HHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred CCEEEEEecCCCCCCCcHH--HHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHH
Confidence 44566666542 234432 11222222344444 67887666666666677777888889998666555666667778
Q ss_pred HHHHhcCceEEEEcCC
Q 046637 105 VLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 105 ~~l~~~~~~~vi~~~~ 120 (301)
..++..++++++++..
T Consensus 127 ~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 127 VTMRAFGAELILTDPA 142 (344)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHcCCEEEEECCC
Confidence 8899999999999754
No 73
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=69.94 E-value=46 Score=27.59 Aligned_cols=56 Identities=16% Similarity=0.170 Sum_probs=37.6
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC-------CCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-------HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+..+....+. .++...|+.++.++.. ...+++...++..++++|+...
T Consensus 106 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMFY---SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp SCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCeEEECCCCcHHHH---HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 468888887776655533 3445667766655442 6788999999766788776543
No 74
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=66.35 E-value=39 Score=29.64 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=65.2
Q ss_pred cCCccEEEE--CC-------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH--HHHHHHHhhhccceeeecC
Q 046637 27 YRDRPSVVY--GD-------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA--MYELHFGVPMAGAVLCTLN 95 (301)
Q Consensus 27 ~~~~~al~~--~~-------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 95 (301)
.++.+|++. .+ -.+|.+.+...+..+...+ ++.++|++....+..-. ++..+++.+..|+..+..
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~- 228 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHL- 228 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEEC-
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEEC-
Confidence 355666654 11 4789999988887766554 78899998887775332 333567888889887776
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCchhhH
Q 046637 96 TRHDSAMVSVLLRHSEAKIIFVDYQLLPIA 125 (301)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (301)
+....+.+...+ ..++.+++........+
T Consensus 229 ~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l 257 (505)
T 3nyq_A 229 GRFSTEGAAREL-NDGATMLFGVPTMYHRI 257 (505)
T ss_dssp SSCCHHHHHHHH-TTTCCEEEECHHHHHHH
T ss_pred CCCChHHHHHHH-hhCCeEEEehHHHHHHH
Confidence 456777777777 67888888766554443
No 75
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=66.25 E-value=29 Score=30.55 Aligned_cols=78 Identities=12% Similarity=-0.087 Sum_probs=58.9
Q ss_pred eeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCCHHHHHHHHHhcCcceec
Q 046637 201 VICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFG 276 (301)
Q Consensus 201 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 276 (301)
-.+|+..|...+......+ ++.++|++...++-.. --+...++++..|+..+.+. ...++.+...++..++..++
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii 106 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTY-DMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLII 106 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSH-HHHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEE
T ss_pred CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEE
Confidence 4589999987777666544 6778898888777543 22334688899999888774 67889999999999999887
Q ss_pred CCh
Q 046637 277 GAP 279 (301)
Q Consensus 277 ~~P 279 (301)
+..
T Consensus 107 ~~~ 109 (521)
T 3l8c_A 107 AIE 109 (521)
T ss_dssp ESS
T ss_pred ecC
Confidence 654
No 76
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=65.67 E-value=29 Score=28.95 Aligned_cols=79 Identities=18% Similarity=0.149 Sum_probs=48.5
Q ss_pred eeeHHHHHHHH--HHHH-HHHHh-cCCCCCCEEEEEcCCCHH-HHHHHHHhhhccce-eeecCCCCCHHHHHHHHHhcCc
Q 046637 39 QYTWKETHQRC--VKLA-SGLAH-LGISPGDVVAALAPNVPA-MYELHFGVPMAGAV-LCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 39 ~~Ty~el~~~~--~~la-~~L~~-~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
.+++.+..... -..| ..|.. .++++|++|+|.+..+.- ..++.+| ...|+. ++........++...+++..++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqla-k~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIA-AALGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHH-HHcCCEEEEEecCccchHHHHHHHHhcCC
Confidence 47777654321 1122 23444 489999999999986554 4545554 456874 4445554455556667788888
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++..
T Consensus 218 ~~vi~~ 223 (357)
T 1zsy_A 218 EHVITE 223 (357)
T ss_dssp SEEEEH
T ss_pred cEEEec
Confidence 877753
No 77
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=65.30 E-value=24 Score=28.88 Aligned_cols=77 Identities=13% Similarity=-0.013 Sum_probs=48.3
Q ss_pred eeeHHHHHHHHHHH---HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 39 QYTWKETHQRCVKL---ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 39 ~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
.+++.+........ .+.|...++++|++|+|.+..+.--..+...+...|+.++.+. +.++ ..+++..+++.+
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~---~~~~-~~~~~~lGa~~~ 200 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA---SKRN-HAFLKALGAEQC 200 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE---CHHH-HHHHHHHTCSEE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe---ccch-HHHHHHcCCCEE
Confidence 56777765433222 1334556899999999998555554444444456788766553 3444 566777888876
Q ss_pred EEcC
Q 046637 116 FVDY 119 (301)
Q Consensus 116 i~~~ 119 (301)
+-..
T Consensus 201 i~~~ 204 (321)
T 3tqh_A 201 INYH 204 (321)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6543
No 78
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=65.05 E-value=46 Score=27.46 Aligned_cols=78 Identities=9% Similarity=0.019 Sum_probs=49.6
Q ss_pred eeHHHHHHHHHHH---HHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 40 YTWKETHQRCVKL---ASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 40 ~Ty~el~~~~~~l---a~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
+++.+........ .+.|.+. ++++|++|+|.+....-..++.+|-...|+.++.++. +++ -..+++..+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~-~~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDD-RLALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHH-HHHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHH-HHHHHHHcCCCE
Confidence 7777765333322 2335553 7899999999998555666666666555666666644 333 344667788887
Q ss_pred EEEcCC
Q 046637 115 IFVDYQ 120 (301)
Q Consensus 115 vi~~~~ 120 (301)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 776544
No 79
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=63.01 E-value=73 Score=28.27 Aligned_cols=97 Identities=8% Similarity=-0.132 Sum_probs=65.8
Q ss_pred CCCCCceEEEeccCCCCCCC--eeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEe
Q 046637 180 KDECDPIALNYTSGTTSSPK--GVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVC 254 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK--~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~ 254 (301)
..++.++++... |..+..+ .-.+|+..|...+..+...+ +. ++|++...+|-... -+...++++..|+..+.
T Consensus 32 ~~p~~~A~~~~~-~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~-~~~~~lA~~~~Gav~vp 108 (562)
T 3ite_A 32 THPEWKAVEVAT-GFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLI-AFAIIVGIMKSGNTYVP 108 (562)
T ss_dssp HCTTSEEEEEEE-CC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHH-HHHHHHHHHHTTCEEEE
T ss_pred HCCCchhhhccc-ccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEe
Confidence 345667766543 2233322 46799999987777666544 44 68998888876432 23346888999999888
Q ss_pred eC-CCCHHHHHHHHHhcCcceecCCh
Q 046637 255 QR-TVNAKEIFDNITRHKVTHFGGAP 279 (301)
Q Consensus 255 ~~-~~~~~~~~~~i~~~~~t~~~~~P 279 (301)
+. ...++.+...++..++..+++..
T Consensus 109 l~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 109 IEAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp CCTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred cCCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 75 67788999999999999877654
No 80
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=62.73 E-value=47 Score=29.51 Aligned_cols=85 Identities=7% Similarity=-0.135 Sum_probs=63.2
Q ss_pred eeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCC-------HHHHHHHHH
Q 046637 200 GVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVN-------AKEIFDNIT 268 (301)
Q Consensus 200 ~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~-------~~~~~~~i~ 268 (301)
.-.+|+..|...+......+ ++.++|++...+|-.. --+...++++..|+..+.+. ... +..+...++
T Consensus 47 ~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~ 125 (576)
T 3gqw_A 47 EDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSS-EFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLA 125 (576)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSH-HHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHH
T ss_pred eeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHH
Confidence 46899999988777666554 6789999988888643 22334688899999988875 333 577888899
Q ss_pred hcCcceecCChHHHHHH
Q 046637 269 RHKVTHFGGAPTVLNMI 285 (301)
Q Consensus 269 ~~~~t~~~~~P~~~~~l 285 (301)
..++..+++.......+
T Consensus 126 ~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 126 SCQPAAIITGDEWLPLV 142 (576)
T ss_dssp HHCCSEEEECGGGHHHH
T ss_pred hcCCCEEEecHHHHHHH
Confidence 99999998877655443
No 81
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=61.35 E-value=71 Score=26.61 Aligned_cols=81 Identities=14% Similarity=0.140 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC---CCHHHHHHHHHhcCceEEEEcC--CchhhHHHHHHHh
Q 046637 60 GISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR---HDSAMVSVLLRHSEAKIIFVDY--QLLPIAQGAFEIL 132 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~---~~~~~l~~~l~~~~~~~vi~~~--~~~~~~~~~~~~~ 132 (301)
++++||.|.+..+....... ++...|+.++ ++++. ...+++...++. ++++|+... .....+.++.+.+
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~g~~~~~~~i~~l~ 151 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTVNLLGNPNNFDEINKII 151 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEECGGGCCCCHHHHHHHH
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEECCccChhhHHHHHHHH
Confidence 68899999888777665543 3445676554 44432 367888887754 566666532 2223344444444
Q ss_pred ccccCCCCceEEccCC
Q 046637 133 SKTSAKLPLLVLVPEC 148 (301)
Q Consensus 133 ~~~~~~~~~i~~~~~~ 148 (301)
. ....+++.|..
T Consensus 152 ~----~~~~~li~D~a 163 (390)
T 3b8x_A 152 G----GRDIILLEDNC 163 (390)
T ss_dssp T----TSCCEEEEECT
T ss_pred H----HcCCEEEEECc
Confidence 3 23445555544
No 82
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=60.19 E-value=29 Score=29.15 Aligned_cols=62 Identities=10% Similarity=0.040 Sum_probs=39.7
Q ss_pred HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecC--C---CCCHHHHHHHHHhcC--ceEEEEc
Q 046637 54 SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLN--T---RHDSAMVSVLLRHSE--AKIIFVD 118 (301)
Q Consensus 54 ~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~---~~~~~~l~~~l~~~~--~~~vi~~ 118 (301)
..|...++++||.|.+..+....+. -++...|+.++.++ + ....+++...+..-+ .++|+..
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPATP---LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 3355557899999988777655543 34556787665554 3 236788888774434 6777654
No 83
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=59.57 E-value=45 Score=27.37 Aligned_cols=91 Identities=16% Similarity=0.121 Sum_probs=53.3
Q ss_pred CCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHH
Q 046637 28 RDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVS 104 (301)
Q Consensus 28 ~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (301)
+.++++..++. +-|++.-- +..+...+.+.| +++|+...+....+=.-..+.++|.+.|..++.+-|...+..-.
T Consensus 29 g~~v~~K~E~~~ptGSfK~R~--a~~~l~~a~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~ 106 (322)
T 1z7w_A 29 VGRVAAKLEMMEPCSSVKDRI--GFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERR 106 (322)
T ss_dssp SSEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHH
T ss_pred CceEEEEecccCCCCchHHHH--HHHHHHHHHHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHH
Confidence 34566666542 22333321 111222234555 46675333334455555666677778998666555554556677
Q ss_pred HHHHhcCceEEEEcCC
Q 046637 105 VLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 105 ~~l~~~~~~~vi~~~~ 120 (301)
..++..++++++++..
T Consensus 107 ~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 107 IILLAFGVELVLTDPA 122 (322)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHcCCEEEEeCCC
Confidence 8889999999998854
No 84
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=59.41 E-value=85 Score=26.94 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH-HhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHF-GVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|++..+.-......+- .+...|+.++.++.. ..+++...++. ++++|+++
T Consensus 118 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-d~~~l~~ai~~-~t~~v~~e 174 (430)
T 3ri6_A 118 ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-DSLAVEHACDE-TTKLLFLE 174 (430)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhhCC-CCeEEEEE
Confidence 4566666555444333322221 344556555555444 55555555543 45555554
No 85
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=59.22 E-value=78 Score=28.69 Aligned_cols=89 Identities=4% Similarity=-0.247 Sum_probs=63.4
Q ss_pred CCCCCceEEEeccCCCCCCCeeeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC
Q 046637 180 KDECDPIALNYTSGTTSSPKGVICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR 256 (301)
Q Consensus 180 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~ 256 (301)
..|+.+|++.. .-.+|+..|...+..+...+ +..+++++..+++-+- --...+++++..|+..+.++
T Consensus 39 ~~Pd~~Av~~~---------~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~-~~vva~lailkaGa~~vpld 108 (620)
T 4dg8_A 39 LHPHREAIRDR---------FGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSR-ESITCLLAILLSGHHYLYID 108 (620)
T ss_dssp HCTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCH-HHHHHHHHHHHTTCEEEECC
T ss_pred hCCCCeEEEcC---------CCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHhCCEEEeeC
Confidence 34566666531 23699999987766665544 6789999888887543 22334688899999988885
Q ss_pred -CCCHHHHHHHHHhcCcceecCC
Q 046637 257 -TVNAKEIFDNITRHKVTHFGGA 278 (301)
Q Consensus 257 -~~~~~~~~~~i~~~~~t~~~~~ 278 (301)
...++.+...++..++..+...
T Consensus 109 ~~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 109 LKQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp TTSCHHHHHHHHHHHTEEEEEEC
T ss_pred ccChHHHHHHHHHhCCCcEEEec
Confidence 5567788888899999888743
No 86
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=58.70 E-value=60 Score=26.99 Aligned_cols=80 Identities=11% Similarity=0.034 Sum_probs=48.2
Q ss_pred eeeeHHHHH---HHHHH---HHHHHHh--cCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHh
Q 046637 38 VQYTWKETH---QRCVK---LASGLAH--LGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRH 109 (301)
Q Consensus 38 ~~~Ty~el~---~~~~~---la~~L~~--~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 109 (301)
..+++.+.. ..... .-+.|.+ .++++|++|+|.+....-..++.+|-...|+.++.+.. +++. ..+++.
T Consensus 153 ~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~-~~~~~~ 229 (359)
T 1h2b_A 153 KDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEK-LKLAER 229 (359)
T ss_dssp TTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHH-HHHHHH
T ss_pred CCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHH-HHHHHH
Confidence 357777754 11111 1234555 78999999999999545555556655433876666643 3333 344567
Q ss_pred cCceEEEEcCC
Q 046637 110 SEAKIIFVDYQ 120 (301)
Q Consensus 110 ~~~~~vi~~~~ 120 (301)
.+++.++-..+
T Consensus 230 lGa~~vi~~~~ 240 (359)
T 1h2b_A 230 LGADHVVDARR 240 (359)
T ss_dssp TTCSEEEETTS
T ss_pred hCCCEEEeccc
Confidence 88887775443
No 87
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=58.52 E-value=41 Score=27.71 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=49.5
Q ss_pred eeeeHHHHHHHHHH---HHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVK---LASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~---la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+....... .-+.|...++++|++|+|.+....-..++.+|- ..|+.++.+.. +++.+ .+++..+++.
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~ 213 (340)
T 3s2e_A 138 DKVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKL-NLARRLGAEV 213 (340)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHH-HHHHHcCCCE
Confidence 35777775432222 123455568999999999988666666666665 56887666644 33443 4567788887
Q ss_pred EEEcC
Q 046637 115 IFVDY 119 (301)
Q Consensus 115 vi~~~ 119 (301)
++-..
T Consensus 214 ~i~~~ 218 (340)
T 3s2e_A 214 AVNAR 218 (340)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 76543
No 88
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=57.75 E-value=72 Score=25.99 Aligned_cols=90 Identities=11% Similarity=0.031 Sum_probs=54.0
Q ss_pred CCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHH
Q 046637 28 RDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLGI-SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVS 104 (301)
Q Consensus 28 ~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (301)
+.++++..++. +=|++.--. ..+...+.+.|. ++|+.|.-.+ .+=.-..+.++|...|..++.+-|...+..-.
T Consensus 25 g~~i~~K~E~~~ptGSfK~R~a--~~~i~~a~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~ 101 (316)
T 1y7l_A 25 NGNVVVKIEGRNPSYSVKCRIG--ANMVWQAEKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERK 101 (316)
T ss_dssp TTCEEEEETTSSGGGBTHHHHH--HHHHHHHHHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHH
T ss_pred CCEEEEEeccCCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHH
Confidence 34677777653 233343322 222223445554 6676555543 44555556667778888665555554556677
Q ss_pred HHHHhcCceEEEEcCC
Q 046637 105 VLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 105 ~~l~~~~~~~vi~~~~ 120 (301)
..++..++++++++..
T Consensus 102 ~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 102 RLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHcCCEEEEeCCC
Confidence 7889999999999864
No 89
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=56.94 E-value=40 Score=27.89 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=38.0
Q ss_pred CCCCCCEEEEEcCCCH------HHHH-HHHHhhhccceeeecCCC------------CCHHHHHHHHHhcCceEEEEcC
Q 046637 60 GISPGDVVAALAPNVP------AMYE-LHFGVPMAGAVLCTLNTR------------HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~------~~~~-~~lA~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
-+++||+|+|++|++. +-+- +.--+-..|..++.-..- ...+++...+.+-.+++|++..
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 86 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVI 86 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcC
Confidence 4789999999999853 2221 111223457665543211 1235788888888999999974
No 90
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=56.70 E-value=51 Score=28.49 Aligned_cols=64 Identities=25% Similarity=0.198 Sum_probs=45.0
Q ss_pred HHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 56 LAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 56 L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
..+.| +++|....+....+=.-....++|...|..++.+-|...+.+-...++..++++++++.
T Consensus 165 A~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 165 AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 34566 47775544444456566666777888898666555665666777889999999999974
No 91
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=56.63 E-value=61 Score=26.40 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=52.6
Q ss_pred CccEEEECCe--eeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHH
Q 046637 29 DRPSVVYGDV--QYTWKETHQRCVKLASGLAHLGI-SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSV 105 (301)
Q Consensus 29 ~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (301)
.++++..++. .-|++.-- +..+...+.+.|. ++|+.|.. ...+=.-..+.++|...|..++.+-|...+..-..
T Consensus 31 ~~i~~K~E~~~ptgSfK~R~--a~~~l~~a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 107 (313)
T 2q3b_A 31 ADIVAKLEFFNPANSVKDRI--GVAMLQAAEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRM 107 (313)
T ss_dssp SEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred cEEEEEehhcCCCCcHHHHH--HHHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 3556655442 33444322 2222233444553 67776655 44444555566667788986665555545566677
Q ss_pred HHHhcCceEEEEcCC
Q 046637 106 LLRHSEAKIIFVDYQ 120 (301)
Q Consensus 106 ~l~~~~~~~vi~~~~ 120 (301)
.++..++++++++..
T Consensus 108 ~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 108 LLRAYGAELILTPGA 122 (313)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEeCCC
Confidence 888999999999863
No 92
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=55.49 E-value=40 Score=27.93 Aligned_cols=77 Identities=13% Similarity=0.051 Sum_probs=46.8
Q ss_pred eeeeHHHHHHHHHHH---HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKL---ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.......+ .+.+...++++|++|+|++...+-..++.+| ...|+ .++.++.. + +-..+++..+++
T Consensus 138 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~--~-~~~~~~~~lGa~ 213 (352)
T 3fpc_A 138 KEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSR--K-HCCDIALEYGAT 213 (352)
T ss_dssp TTSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCC--H-HHHHHHHHHTCC
T ss_pred CCCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCC--H-HHHHHHHHhCCc
Confidence 357777664321221 1335566899999999998744455555554 46787 56666443 3 334566777887
Q ss_pred EEEEc
Q 046637 114 IIFVD 118 (301)
Q Consensus 114 ~vi~~ 118 (301)
.++-.
T Consensus 214 ~vi~~ 218 (352)
T 3fpc_A 214 DIINY 218 (352)
T ss_dssp EEECG
T ss_pred eEEcC
Confidence 76653
No 93
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=55.41 E-value=43 Score=27.83 Aligned_cols=60 Identities=15% Similarity=0.254 Sum_probs=38.3
Q ss_pred CCCCCCEEEEEcCCCHH------HHHHHHH-hhhccceeeecCC---------CC---CHHHHHHHHHhcCceEEEEcC
Q 046637 60 GISPGDVVAALAPNVPA------MYELHFG-VPMAGAVLCTLNT---------RH---DSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~------~~~~~lA-~~~~G~~~v~l~~---------~~---~~~~l~~~l~~~~~~~vi~~~ 119 (301)
-+++||+|+|++|++.- -+-.... +-..|..++.-.. .. ..++|...+.+-++++|++..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47899999999999842 1222222 2246776664321 11 225677788888999999974
No 94
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=55.32 E-value=86 Score=25.78 Aligned_cols=79 Identities=14% Similarity=0.004 Sum_probs=47.8
Q ss_pred eeeeHHHHHHHHHHHHHH---H-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLASG---L-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.......++.. | ...++++|++|+|.+..+.--..+...+...|+.++.+..+. +.+ ..++..+++
T Consensus 130 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~-~~~~~~ga~ 206 (342)
T 4eye_A 130 PQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT--AAT-EFVKSVGAD 206 (342)
T ss_dssp TTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG--GGH-HHHHHHTCS
T ss_pred CCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHH-HHHHhcCCc
Confidence 357888765444443333 3 334899999999999866554444444456788776665432 222 344456777
Q ss_pred EEEEcC
Q 046637 114 IIFVDY 119 (301)
Q Consensus 114 ~vi~~~ 119 (301)
.++-..
T Consensus 207 ~v~~~~ 212 (342)
T 4eye_A 207 IVLPLE 212 (342)
T ss_dssp EEEESS
T ss_pred EEecCc
Confidence 666443
No 95
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=55.02 E-value=86 Score=25.90 Aligned_cols=53 Identities=11% Similarity=0.085 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--------CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--------HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-..+.. ++...|+.++.++.. ...+++...++. +++++..
T Consensus 111 ~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i~ 171 (391)
T 4dq6_A 111 TKANDKIMIQEPVYSPFNS---VVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFILC 171 (391)
T ss_dssp SCTTCEEEECSSCCTHHHH---HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHH---HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEEE
Confidence 4678888777665554332 344567666555433 477888888877 6666554
No 96
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=54.56 E-value=44 Score=27.98 Aligned_cols=59 Identities=22% Similarity=0.286 Sum_probs=38.1
Q ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEE
Q 046637 55 GLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 55 ~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (301)
.+...++++|++|+|.+....-..++.+| ...|+ .++.+... ++ -..+++..+++.++-
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~--~~-~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLA-RLAGATTVILSTRQ--AT-KRRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSC--HH-HHHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCC--HH-HHHHHHHcCCCEEEC
Confidence 35556899999999999844445544444 46787 66666433 33 344666777776664
No 97
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=53.90 E-value=87 Score=25.33 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=42.1
Q ss_pred HHhcC-CCCCC--EEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 56 LAHLG-ISPGD--VVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 56 L~~~g-v~~g~--~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
+.+.| +++|+ .|.. ...+=.-..+.++|...|..++.+-|...+..-...++..++++++++..
T Consensus 51 a~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 51 AEERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34445 56776 4443 34444455566667789986665555445566777889999999999865
No 98
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=53.46 E-value=97 Score=25.77 Aligned_cols=55 Identities=13% Similarity=0.154 Sum_probs=39.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc---CceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS---EAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vi~~~ 119 (301)
.++||.|.+..+....+.. ++...|+.++.++. ...+++...++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~~---~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASIID---GSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHHH---HHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHHH---HHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 5789999888777665543 34556887777754 5678899888775 677777754
No 99
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=53.09 E-value=25 Score=21.44 Aligned_cols=33 Identities=9% Similarity=0.003 Sum_probs=16.7
Q ss_pred HHHHHHhhhcCCccEEEECCeeeeHHHHHHHHH
Q 046637 18 SFLERSAVVYRDRPSVVYGDVQYTWKETHQRCV 50 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~ 50 (301)
..+....+..|+...++..++..+|+.+.+-.+
T Consensus 34 ~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vmd 66 (74)
T 2jwk_A 34 QLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALN 66 (74)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTSCHHHHHHHHH
T ss_pred HHHHHHHhhCCCceEEEEcCCCCCHHHHHHHHH
Confidence 344444444555555555555555555544433
No 100
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=53.06 E-value=37 Score=28.27 Aligned_cols=58 Identities=9% Similarity=0.076 Sum_probs=39.0
Q ss_pred CCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCch
Q 046637 64 GDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLL 122 (301)
Q Consensus 64 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 122 (301)
++.|.-. ..+=.-....++|.+.|..++.+-|...+.+-...++..++++++++....
T Consensus 76 ~~~vv~~-SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~~ 133 (346)
T 3l6b_A 76 PKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDE 133 (346)
T ss_dssp CSCEEEE-CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 3344333 334445556677888898665555555666778889999999999987643
No 101
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=53.02 E-value=98 Score=25.69 Aligned_cols=76 Identities=14% Similarity=0.036 Sum_probs=46.2
Q ss_pred eeeeHHHHHHHHHHH--H-HHH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKL--A-SGL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~l--a-~~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+........ | ..| ...++++|++|+|.+....-..++.+| ...|+.++.+.. +.+.+. +++..+++
T Consensus 160 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~--~~~~~~-~~~~lGa~ 235 (363)
T 3uog_A 160 KSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSS--SREKLD-RAFALGAD 235 (363)
T ss_dssp TTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEES--CHHHHH-HHHHHTCS
T ss_pred CCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEec--CchhHH-HHHHcCCC
Confidence 467888765332222 2 234 345899999999999444444444444 467887666643 334443 46677887
Q ss_pred EEEE
Q 046637 114 IIFV 117 (301)
Q Consensus 114 ~vi~ 117 (301)
.++-
T Consensus 236 ~vi~ 239 (363)
T 3uog_A 236 HGIN 239 (363)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7775
No 102
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=53.01 E-value=46 Score=28.85 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=48.9
Q ss_pred eeeeHHHHHHHHHHHHHH---HHh---cCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcC
Q 046637 38 VQYTWKETHQRCVKLASG---LAH---LGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSE 111 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L~~---~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (301)
..+++.+........... |.. .++++|++|+|.+..+.--.++...+...|+.++.+.. +++.+ .+++..+
T Consensus 197 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~--~~~~~-~~~~~lG 273 (456)
T 3krt_A 197 DHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVS--SPQKA-EICRAMG 273 (456)
T ss_dssp TTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHHT
T ss_pred CCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEEC--CHHHH-HHHHhhC
Confidence 357887765332222222 322 47899999999998666555455555567887666642 44444 4557788
Q ss_pred ceEEEEcC
Q 046637 112 AKIIFVDY 119 (301)
Q Consensus 112 ~~~vi~~~ 119 (301)
++.++-..
T Consensus 274 a~~vi~~~ 281 (456)
T 3krt_A 274 AEAIIDRN 281 (456)
T ss_dssp CCEEEETT
T ss_pred CcEEEecC
Confidence 88776543
No 103
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=52.85 E-value=99 Score=25.70 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=29.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC----------CCCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT----------RHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----------~~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++||.|.+..+....+. -++...|+.++.++. ....+++...++. ++++++.
T Consensus 123 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 185 (407)
T 3nra_A 123 VARGDKVAIVQPDYFANR---KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLF 185 (407)
T ss_dssp CCTTCEEEEEESCCTHHH---HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEE
T ss_pred CCCCCEEEEcCCcccchH---HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEE
Confidence 467888777766655433 333445654443322 1356777777765 5565544
No 104
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=52.02 E-value=54 Score=27.08 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=45.8
Q ss_pred eeeeHHHHHHHHHHH---HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKL---ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+........ -+.|.+.++++|++|+|.+...+-..++.+|- ..|+.++.+...... + ++++..+++.
T Consensus 148 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~~--~-~~~~~lGa~~ 223 (348)
T 3two_A 148 KNAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEHK--K-QDALSMGVKH 223 (348)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSSTT--H-HHHHHTTCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHHH--H-HHHHhcCCCe
Confidence 357777764322221 23456668999999999987444555555554 568877666544322 2 2445677877
Q ss_pred EE
Q 046637 115 IF 116 (301)
Q Consensus 115 vi 116 (301)
++
T Consensus 224 v~ 225 (348)
T 3two_A 224 FY 225 (348)
T ss_dssp EE
T ss_pred ec
Confidence 77
No 105
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=51.88 E-value=71 Score=26.47 Aligned_cols=89 Identities=12% Similarity=0.048 Sum_probs=51.8
Q ss_pred CccEEEECCe--eeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHH
Q 046637 29 DRPSVVYGDV--QYTWKETHQRCVKLASGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSV 105 (301)
Q Consensus 29 ~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (301)
.++++..++. +=|++.-- +..+...+.+.| +++|+.|...+. +=.-..+.++|...|..++.+-|...+..-..
T Consensus 42 ~~v~~K~E~~~ptGSfKdR~--a~~~l~~a~~~g~~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~ 118 (343)
T 2pqm_A 42 TRILVKLEYFNPMSSVKDRV--GFNIVYQAIKDGRLKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQM 118 (343)
T ss_dssp CEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHHTSSCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHH
T ss_pred cEEEEEeccCCCCCChHHHH--HHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3566656542 33444331 112222233445 467776655543 44444555666778886655555545566777
Q ss_pred HHHhcCceEEEEcCC
Q 046637 106 LLRHSEAKIIFVDYQ 120 (301)
Q Consensus 106 ~l~~~~~~~vi~~~~ 120 (301)
.++..++++++++..
T Consensus 119 ~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 119 IMKAFGAELILTEGK 133 (343)
T ss_dssp HHHHTTCEEEEECGG
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999999863
No 106
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=51.87 E-value=50 Score=27.91 Aligned_cols=60 Identities=13% Similarity=0.186 Sum_probs=38.4
Q ss_pred CCCCCCEEEEEcCCCHH------HHHHHHH-hhhccceeeecCCC---------C---CHHHHHHHHHhcCceEEEEcC
Q 046637 60 GISPGDVVAALAPNVPA------MYELHFG-VPMAGAVLCTLNTR---------H---DSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~---------~---~~~~l~~~l~~~~~~~vi~~~ 119 (301)
-+++||+|+|++|++.- -+-.... +-..|..++.-... . ..++|...+.+-++++|++..
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 58999999999999742 2222222 22467766543221 1 235677777778899999964
No 107
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=51.19 E-value=66 Score=26.34 Aligned_cols=60 Identities=7% Similarity=-0.111 Sum_probs=40.3
Q ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 57 AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 57 ~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
...++++|++|+|.+..+.--..+.-.+...|+.++.+. .+++.+....+..+++.++-.
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~--~~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIA--GGAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE--SSHHHHHHHHHTTCCSEEEET
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEe--CCHHHHHHHHHHcCCCEEEEC
Confidence 345899999999999966554444444557788766664 345566555577788766643
No 108
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=50.88 E-value=42 Score=27.95 Aligned_cols=79 Identities=18% Similarity=0.168 Sum_probs=46.5
Q ss_pred eeeHHHHHHHHH--HHH-HHHHhc-CCCCC-CEEEEEcCCCHH-HHHHHHHhhhccceeeecC-CCCCHHHHHHHHHhcC
Q 046637 39 QYTWKETHQRCV--KLA-SGLAHL-GISPG-DVVAALAPNVPA-MYELHFGVPMAGAVLCTLN-TRHDSAMVSVLLRHSE 111 (301)
Q Consensus 39 ~~Ty~el~~~~~--~la-~~L~~~-gv~~g-~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~-~~~~~~~l~~~l~~~~ 111 (301)
.+++.+...... ..| +.|.+. ++++| ++|+|.+..+.- ..++.+|- ..|+.++.+. .....++....++..+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcC
Confidence 577776543221 122 234443 89999 999999985554 55555554 5687655553 3333234445557778
Q ss_pred ceEEEEc
Q 046637 112 AKIIFVD 118 (301)
Q Consensus 112 ~~~vi~~ 118 (301)
++.++-.
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8877654
No 109
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=50.76 E-value=1.1e+02 Score=26.20 Aligned_cols=59 Identities=7% Similarity=0.209 Sum_probs=38.1
Q ss_pred CCCCCEEEEEc-CCCHHHHHHH--------HHhhhccceeeecCCC----CCHHHHHHHHHh-cCceEEEEcC
Q 046637 61 ISPGDVVAALA-PNVPAMYELH--------FGVPMAGAVLCTLNTR----HDSAMVSVLLRH-SEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~-~n~~~~~~~~--------lA~~~~G~~~v~l~~~----~~~~~l~~~l~~-~~~~~vi~~~ 119 (301)
+++||.|.+.. +.-....-.+ -.+...|+.+..++.. ...+++...++. .++++|+++.
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 57899988775 4333222222 2344567777766543 577889988875 5788888876
No 110
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=50.43 E-value=1e+02 Score=25.16 Aligned_cols=56 Identities=11% Similarity=0.069 Sum_probs=37.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecC--CC----CCHHHHHHHHHh----cCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLN--TR----HDSAMVSVLLRH----SEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~~----~~~~~vi~~~ 119 (301)
+++||.|.+..+........ +...|+.++.++ .. ...+++...++. -++++++...
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 56899998887776655444 556677666554 22 367889888875 3667766653
No 111
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=50.20 E-value=72 Score=25.87 Aligned_cols=90 Identities=13% Similarity=0.078 Sum_probs=51.6
Q ss_pred CCccEEEECCe--eeeHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHH
Q 046637 28 RDRPSVVYGDV--QYTWKETHQRCVKLASGLAHLGI-SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVS 104 (301)
Q Consensus 28 ~~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (301)
+.++++..++. .=|++.--. ..+...+.+.|. ++|+.|.. ...+=.-..+.++|...|..++.+-|...+..-.
T Consensus 28 g~~i~~K~E~~~ptgSfK~R~a--~~~l~~a~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~ 104 (308)
T 2egu_A 28 SADVYLKLEFMNPGSSVKDRIA--LAMIEAAEKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERR 104 (308)
T ss_dssp SCEEEEEEGGGSTTSBTHHHHH--HHHHHHHHHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHH
T ss_pred CCEEEEEecccCCCCChHHHHH--HHHHHHHHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHH
Confidence 34566666542 234443222 222233444553 67766554 3334444556666777888665554544455667
Q ss_pred HHHHhcCceEEEEcCC
Q 046637 105 VLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 105 ~~l~~~~~~~vi~~~~ 120 (301)
..++..++++++++..
T Consensus 105 ~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 105 NLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHcCCEEEEECCC
Confidence 7889999999999864
No 112
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=49.97 E-value=76 Score=26.25 Aligned_cols=78 Identities=12% Similarity=-0.071 Sum_probs=47.3
Q ss_pred eeeeHHHHHHHHHHHHHH---H-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLASG---L-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.......++.. | ...++++|++|+|.+..+.--..+...+...|+.++.+.. +.+.+ ..++..+++
T Consensus 138 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~ 214 (353)
T 4dup_A 138 KGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG--STGKC-EACERLGAK 214 (353)
T ss_dssp TTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHH-HHHHHHTCS
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHH-HHHHhcCCC
Confidence 357888765444433333 3 2348999999999976665544444445577887666643 34444 344556777
Q ss_pred EEEEc
Q 046637 114 IIFVD 118 (301)
Q Consensus 114 ~vi~~ 118 (301)
.++-.
T Consensus 215 ~~~~~ 219 (353)
T 4dup_A 215 RGINY 219 (353)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 66543
No 113
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=49.96 E-value=73 Score=25.45 Aligned_cols=57 Identities=14% Similarity=0.088 Sum_probs=45.7
Q ss_pred HHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHH
Q 046637 18 SFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMY 78 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~ 78 (301)
..+++..+.-|+...+.+.| ...|..++.+++...+..|.+.|.+ ..++.-|....+
T Consensus 19 tv~~~i~~~lP~~~~iy~~D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~~----~IVIACNTa~~~ 81 (269)
T 3ist_A 19 TVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIK----MLVIACNTATAA 81 (269)
T ss_dssp HHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCCccHH
Confidence 56777778889988888765 4689999999999999999998765 677777776653
No 114
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=49.54 E-value=1.1e+02 Score=25.34 Aligned_cols=54 Identities=15% Similarity=0.211 Sum_probs=32.4
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC-------CCHHHHHHHHHhcCceEEEEc
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-------HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~ 118 (301)
++||.|.+..+.-..+. .++...|+.++.++.. ...+++...++..++++|+..
T Consensus 111 ~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~ 171 (399)
T 1c7n_A 111 KPGDGVIIITPVYYPFF---MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFC 171 (399)
T ss_dssp CTTCEEEECSSCCTHHH---HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEE
T ss_pred CCCCEEEEcCCCcHhHH---HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEc
Confidence 56787777666544433 2334556655554432 567888888865566776653
No 115
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=49.54 E-value=81 Score=25.91 Aligned_cols=57 Identities=11% Similarity=0.044 Sum_probs=34.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecC--CC--CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLN--TR--HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~--~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+..+.+....-++...|+.++.++ +. ...+++...++. ++++|+..
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEE
Confidence 35788888877666555444444455676555443 33 356778777754 56766664
No 116
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=49.30 E-value=52 Score=27.28 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=38.5
Q ss_pred CCCCCCEEEEEcCCCHH------HHHHHHH-hhhccceeeecCCC--------C----CHHHHHHHHHhcCceEEEEcC
Q 046637 60 GISPGDVVAALAPNVPA------MYELHFG-VPMAGAVLCTLNTR--------H----DSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~------~~~~~lA-~~~~G~~~v~l~~~--------~----~~~~l~~~l~~~~~~~vi~~~ 119 (301)
-+++||+|+|++|++.- -+-.... +-..|..++.-..- . ..++|...+.+-++++|++..
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 86 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTL 86 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 47899999999998752 2222222 22467766643211 1 235677788888999999964
No 117
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=49.11 E-value=1e+02 Score=24.87 Aligned_cols=83 Identities=16% Similarity=0.150 Sum_probs=50.9
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--CCHH---HHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--HDSA---MVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. +++.+.+..+...+...++.--+++-..+. ..+++. -++. ++...++..+.+
T Consensus 157 N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~ 234 (294)
T 3hh8_A 157 NLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYI--WEINTEEEGTPDQISSLIEKLKVIKPS 234 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEE--ESSCCSCCCCHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeec--cccCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 3455555555665555543 343334556666778888888888765542 223332 3444 455666778999
Q ss_pred EEEEcCCchhhH
Q 046637 114 IIFVDYQLLPIA 125 (301)
Q Consensus 114 ~vi~~~~~~~~~ 125 (301)
+||++...-...
T Consensus 235 ~if~e~~~~~~~ 246 (294)
T 3hh8_A 235 ALFVESSVDRRP 246 (294)
T ss_dssp CEEEETTSCSHH
T ss_pred EEEEeCCCCcHH
Confidence 999988766543
No 118
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=48.99 E-value=81 Score=23.56 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCCHH--HHHHHHHhhhccceeeecCC--CCCHHHHHHHHHhcC
Q 046637 60 GISPGDVVAALAPNVPA--MYELHFGVPMAGAVLCTLNT--RHDSAMVSVLLRHSE 111 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~--~~~~~~l~~~l~~~~ 111 (301)
|+.+|+.+++.++++.- .++..++. ..|..++.++. ..+.+++..+.+..+
T Consensus 16 gi~~G~~~~i~G~~GsGKTtl~~~l~~-~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 70 (220)
T 2cvh_A 16 GFAPGVLTQVYGPYASGKTTLALQTGL-LSGKKVAYVDTEGGFSPERLVQMAETRG 70 (220)
T ss_dssp SBCTTSEEEEECSTTSSHHHHHHHHHH-HHCSEEEEEESSCCCCHHHHHHHHHTTT
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHH-HcCCcEEEEECCCCCCHHHHHHHHHhcC
Confidence 79999999999999862 44444444 55554454544 347888877766544
No 119
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=48.99 E-value=1.1e+02 Score=25.00 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=37.9
Q ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 59 LGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 59 ~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++++|++|+|.+..+.--..+...+...|+.++.+.. +.+.+. .++..+++.++..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 38999999999996655444444444567887766654 344444 5667787776654
No 120
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=48.70 E-value=1e+02 Score=25.20 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=40.1
Q ss_pred HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 54 SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 54 ~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
..+...++++|++|+|.+.-+.-..++.+|- ..|+ .++.++. + ++-..+++..+++.++-..+
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak-~~G~~~vi~~~~--~-~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAV-ALGAKSVTAIDI--S-SEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--C-HHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHH-HcCCcEEEEEec--h-HHHHHHHHHcCCeEEEeCCC
Confidence 3455668999999999988555555555554 5554 4445533 2 33345677888887776543
No 121
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=48.42 E-value=1.1e+02 Score=25.05 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=34.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC-------CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-------HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-..+. -++...|+.++.++.. ...+++...+ ..++++++..
T Consensus 103 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i~ 163 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFF---EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLLC 163 (383)
T ss_dssp CCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEEE
T ss_pred CCCCCEEEEcCCCcHHHH---HHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEEe
Confidence 467888887777655543 3345567766655432 5778888888 4566666554
No 122
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=48.39 E-value=71 Score=26.72 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=38.2
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC--C--CCHHHHHHHHHhc--CceEEEEcC
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT--R--HDSAMVSVLLRHS--EAKIIFVDY 119 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~--~~~~vi~~~ 119 (301)
+...++++||.|.+..+.......+ +...|+.++.++. . ...+++...++.. ++++|+...
T Consensus 64 ~~~l~~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 64 LRVAGVKQDDIVLASSFTFIASVAP---ICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HHHTTCCTTCEEEEESSSCGGGTHH---HHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HHHcCCCCCCEEEECCCccHHHHHH---HHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 3444578899998888876655432 3346765555443 2 4678888888754 466666543
No 123
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=47.67 E-value=86 Score=25.81 Aligned_cols=54 Identities=28% Similarity=0.445 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC----CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR----HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~----~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+....+.- ++...|+.++ ++++. ...+++...++. ++++|+..
T Consensus 102 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 161 (375)
T 3op7_A 102 IEPGDHVISLYPTYQQLYD---IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-TTKMICIN 161 (375)
T ss_dssp CCTTCEEEEEESSCTHHHH---HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-TCCEEEEE
T ss_pred cCCCCEEEEeCCCchhHHH---HHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-CCeEEEEc
Confidence 5789999888777655442 2445566554 44322 367888887753 56666665
No 124
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=46.55 E-value=68 Score=25.77 Aligned_cols=85 Identities=9% Similarity=0.048 Sum_probs=53.5
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC--CCCHHH---HHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT--RHDSAM---VSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. ++..+.+..+.......++.--+++-..|.. .+++ .-++.+ +...++..+.+
T Consensus 137 N~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~ 214 (282)
T 3mfq_A 137 NTEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQ--GVSTDSEVANSDMIETVNLIIDHNIK 214 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSS--CSSSCSCCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEeccc--ccCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 4555666666666666543 4444567777777788888777777655532 2333 234544 55566778999
Q ss_pred EEEEcCCchhhHHH
Q 046637 114 IIFVDYQLLPIAQG 127 (301)
Q Consensus 114 ~vi~~~~~~~~~~~ 127 (301)
+||++...-....+
T Consensus 215 ~if~e~~~~~~~~~ 228 (282)
T 3mfq_A 215 AIFTESTTNPERMK 228 (282)
T ss_dssp EEECBTTSCTHHHH
T ss_pred EEEEeCCCChHHHH
Confidence 99998876655444
No 125
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=46.41 E-value=67 Score=27.10 Aligned_cols=59 Identities=22% Similarity=0.204 Sum_probs=33.9
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CC---CCCHHHHHHHHHhcCceEEEEc
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NT---RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~---~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+...++++||.|.+..+....... ++...|+.++.+ ++ ....+++...++. ++++|+..
T Consensus 74 ~~~~~~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 137 (418)
T 2c81_A 74 LEALGIGEGDEVIVPSLTWIATAT---AVLNVNALPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPV 137 (418)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCB
T ss_pred HHHcCCCCcCEEEECCCccHhHHH---HHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEe
Confidence 444456788888887776555432 334566655444 33 2356666666643 55666654
No 126
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=46.38 E-value=87 Score=27.77 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=43.4
Q ss_pred HhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 57 AHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 57 ~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
.+.| +++|+.|.. ...+=.-....++|...|.-++.+-|...+.+-...++..+++++++..
T Consensus 105 ~~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 105 EEQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 3445 578887755 3444455566667778898666555655566777888999999999875
No 127
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=46.25 E-value=51 Score=20.53 Aligned_cols=46 Identities=15% Similarity=0.063 Sum_probs=33.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
..+.+.++.+. +.+.++.+++.|.+++.++.....+...+...|..
T Consensus 22 ~~ip~~~l~~~-------~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKER-------IATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHHH-------HHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHHH-------HHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 46777776543 44456778889999999888877777777777864
No 128
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=46.09 E-value=86 Score=25.36 Aligned_cols=74 Identities=11% Similarity=0.065 Sum_probs=45.8
Q ss_pred eeeeHHHHHHHHHHHHH---HHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKLAS---GLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+.......++. .|...++++|++|+|.+. +.--.++...+...|+.++.+. . ++. ..+++..+++.
T Consensus 114 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~--~~~-~~~~~~lGa~~ 188 (315)
T 3goh_A 114 DNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-A--SLS-QALAAKRGVRH 188 (315)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-S--SCC-HHHHHHHTEEE
T ss_pred CCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-C--hhh-HHHHHHcCCCE
Confidence 35788876533333333 344458999999999999 6544444444456788777765 2 222 23345678887
Q ss_pred EE
Q 046637 115 IF 116 (301)
Q Consensus 115 vi 116 (301)
++
T Consensus 189 v~ 190 (315)
T 3goh_A 189 LY 190 (315)
T ss_dssp EE
T ss_pred EE
Confidence 77
No 129
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=45.82 E-value=1.3e+02 Score=24.92 Aligned_cols=55 Identities=20% Similarity=0.328 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR-----HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+.-..+.. ++...|+.++ ++++. ...+++...++..++++|+..
T Consensus 108 ~~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~ 169 (390)
T 1d2f_A 108 SETGEGVVIHTPAYDAFYK---AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLC 169 (390)
T ss_dssp SCTTCEEEEEESCCHHHHH---HHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEE
T ss_pred cCCCCEEEEcCCCcHHHHH---HHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEe
Confidence 3578888887776555432 2344566544 44322 567888888876567776653
No 130
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=45.69 E-value=1.4e+02 Score=25.34 Aligned_cols=56 Identities=14% Similarity=0.167 Sum_probs=28.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHH-HHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELH-FGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-......+ ..+...|+.++.++.. ..+++...++. +.++|+++
T Consensus 117 ~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~ai~~-~t~~v~le 173 (414)
T 3ndn_A 117 LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-DLSQWERALSV-PTQAVFFE 173 (414)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-CHHHHHHHTSS-CCSEEEEE
T ss_pred hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 567777766655544433222 1123456655555443 55666666643 45555543
No 131
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=45.63 E-value=1.2e+02 Score=25.68 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=36.5
Q ss_pred CCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 60 GISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
++++|++|+|.+...+-..++.+|- ..|+ .++.+... + +-..+++..+++.++-.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~-~~~~~~~~lGa~~vi~~ 265 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILK-HAGASKVILSEPS--E-VRRNLAKELGADHVIDP 265 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--H-HHHHHHHHHTCSEEECT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--H-HHHHHHHHcCCCEEEcC
Confidence 7999999999998444555555554 6787 66666433 3 33345667788877654
No 132
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=45.05 E-value=59 Score=28.01 Aligned_cols=77 Identities=13% Similarity=0.130 Sum_probs=47.3
Q ss_pred eeeeHHHHHHHHHHHHHH---HH---hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcC
Q 046637 38 VQYTWKETHQRCVKLASG---LA---HLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSE 111 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L~---~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (301)
..+++.+.......+... |. ..++++|++|+|.+..+.--..+...+...|+.++.+.. +.+.+. .++..+
T Consensus 189 ~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~--~~~~~~-~~~~lG 265 (447)
T 4a0s_A 189 AHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVS--SAQKEA-AVRALG 265 (447)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTT
T ss_pred CCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHH-HHHhcC
Confidence 457887765433333222 32 258999999999998665544444445567887666642 444444 446778
Q ss_pred ceEEEE
Q 046637 112 AKIIFV 117 (301)
Q Consensus 112 ~~~vi~ 117 (301)
++.++-
T Consensus 266 a~~~i~ 271 (447)
T 4a0s_A 266 CDLVIN 271 (447)
T ss_dssp CCCEEE
T ss_pred CCEEEe
Confidence 776654
No 133
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=44.98 E-value=69 Score=26.60 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=35.2
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeee--cCCC---CCHHHHHHHHHhcCceEEEEc
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCT--LNTR---HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~--l~~~---~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+...++++||.|.+..+...... -++...|+.++. +++. ...+++...++. ++++|+..
T Consensus 71 ~~~~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 134 (393)
T 1mdo_A 71 LMALGIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPV 134 (393)
T ss_dssp HHHTTCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCB
T ss_pred HHHcCCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEe
Confidence 34445678888887776655543 233455665444 4432 466777777754 56666654
No 134
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=44.31 E-value=1.2e+02 Score=24.38 Aligned_cols=89 Identities=17% Similarity=0.146 Sum_probs=52.6
Q ss_pred CccEEEECCe--eeeHHHHHHHHHHHHHHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHH
Q 046637 29 DRPSVVYGDV--QYTWKETHQRCVKLASGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSV 105 (301)
Q Consensus 29 ~~~al~~~~~--~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (301)
.++++..++. +-|++.-- +..+...+.+.| +++|+.|...+. +=.-..+.++|...|..++.+-|...+..-..
T Consensus 25 ~~v~~K~E~~~ptGSfK~R~--a~~~i~~a~~~g~~~~g~~vv~~ss-GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~ 101 (303)
T 2v03_A 25 SEVWLKLEGNNPAGSVKDRA--ALSMIVEAEKRGEIKPGDVLIEATS-GNTGIALAMIAALKGYRMKLLMPDNMSQERRA 101 (303)
T ss_dssp CEEEEEEGGGSTTSBTHHHH--HHHHHHHHHHTTCCCTTCEEEEECS-SHHHHHHHHHHHHHTCEEEEEEETTSCHHHHH
T ss_pred CEEEEEeccCCCCCCcHHHH--HHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 4566666542 23344321 122222334445 467776666553 44444556666788986666555555566777
Q ss_pred HHHhcCceEEEEcCC
Q 046637 106 LLRHSEAKIIFVDYQ 120 (301)
Q Consensus 106 ~l~~~~~~~vi~~~~ 120 (301)
.++..++++++++..
T Consensus 102 ~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 102 AMRAYGAELILVTKE 116 (303)
T ss_dssp HHHHTTCEEEEECTT
T ss_pred HHHHcCCEEEEECCC
Confidence 889999999999863
No 135
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=44.19 E-value=80 Score=26.13 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=45.7
Q ss_pred eeeeHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLA---SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+..- ...++ +.|...++++|++|+|.+....-..++.+|- ..|+ .++.+.. +++. ..+++..+++
T Consensus 144 ~~l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~ 218 (356)
T 1pl8_A 144 DNVTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATR-LSKAKEIGAD 218 (356)
T ss_dssp TTSCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHH-HHHHHHTTCS
T ss_pred CCCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHHHHhCCC
Confidence 3577776432 22222 2344558999999999997445555555554 5687 5665543 2333 3455677887
Q ss_pred EEEEc
Q 046637 114 IIFVD 118 (301)
Q Consensus 114 ~vi~~ 118 (301)
.++..
T Consensus 219 ~vi~~ 223 (356)
T 1pl8_A 219 LVLQI 223 (356)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 66643
No 136
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=44.13 E-value=1.4e+02 Score=25.01 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=34.9
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceE
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
|...++++|++|+|.+.-.+-..++.+|- ..|+ .++.++. +++. ..+++..++++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk-~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~~ 233 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASAR-LLGAAVVIVGDL--NPAR-LAHAKAQGFEI 233 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHH-HHHHHHTTCEE
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCCeEEEEcC--CHHH-HHHHHHcCCcE
Confidence 44568999999999996444455555544 5687 4555533 3333 34557788874
No 137
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=44.12 E-value=1.1e+02 Score=25.01 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=43.7
Q ss_pred HHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 56 LAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 56 L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
..+.| +++|+.|.... .+-.-....++|...|..++.+-|...+..-...++..++++++++..
T Consensus 64 a~~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 64 AEADGLLRPGATILEPT-SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34455 56777765543 344556666677788986665555555566778889999999999863
No 138
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=43.98 E-value=78 Score=26.47 Aligned_cols=78 Identities=10% Similarity=0.055 Sum_probs=46.8
Q ss_pred eeeeHHHHHHHHHHHHHH---H-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLASG---L-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......+... + ...++++|++|+|++.-.+-..++.+| ...|+ .++.++..... .++++..++
T Consensus 164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~~~~---~~~a~~lGa 239 (378)
T 3uko_A 164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDIDSKK---YETAKKFGV 239 (378)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSCTTH---HHHHHTTTC
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHH---HHHHHHcCC
Confidence 357777764433222221 3 345899999999999844444444444 46787 56666544332 235677888
Q ss_pred eEEEEcC
Q 046637 113 KIIFVDY 119 (301)
Q Consensus 113 ~~vi~~~ 119 (301)
+.++-..
T Consensus 240 ~~vi~~~ 246 (378)
T 3uko_A 240 NEFVNPK 246 (378)
T ss_dssp CEEECGG
T ss_pred cEEEccc
Confidence 7766543
No 139
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=43.92 E-value=1.2e+02 Score=24.79 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhcccee--eecCC--CCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVL--CTLNT--RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~--v~l~~--~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-..+.. ++...|+.+ +++++ ....+++...++..++++|++.
T Consensus 106 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYAM---SAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSCH---HHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 5688888887665444322 233456544 44444 3477889988887677777764
No 140
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=43.87 E-value=1.5e+02 Score=25.23 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=35.9
Q ss_pred CCCCCEEEEEc-CCCHHHHHHH-------HHhhhccceeeecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALA-PNVPAMYELH-------FGVPMAGAVLCTLNTR----HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~-~n~~~~~~~~-------lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+.. +.-....... -.+...|+.+..++.. ...+++...++. ++++|+++.
T Consensus 98 l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-~tklV~i~~ 167 (409)
T 3jzl_A 98 LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP-KTKMIGIQR 167 (409)
T ss_dssp CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT-TEEEEEEEC
T ss_pred cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC-CCeEEEEEC
Confidence 57899988776 4333222211 1344567776666542 567888887754 678888775
No 141
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=43.33 E-value=1.4e+02 Score=24.59 Aligned_cols=75 Identities=12% Similarity=0.141 Sum_probs=44.5
Q ss_pred eeeeHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVKLA---SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+..- ...++ +.+...++++|++|+|.+....-..++.+|- ..|+.++.+.. +++.+ .+++..+++.
T Consensus 141 ~~~~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~ 215 (352)
T 1e3j_A 141 DNVSLEEGAL-LEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPRRL-EVAKNCGADV 215 (352)
T ss_dssp TTSCHHHHHT-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHHHH-HHHHHhCCCE
Confidence 3577776432 22222 2344558999999999997444555555554 56876554433 33333 4456778776
Q ss_pred EEE
Q 046637 115 IFV 117 (301)
Q Consensus 115 vi~ 117 (301)
++.
T Consensus 216 ~~~ 218 (352)
T 1e3j_A 216 TLV 218 (352)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 142
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=43.12 E-value=57 Score=26.90 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
++||.|.+..+..+.+.-....+...|+.++.+ ++. ...+++...++. ++++|+...
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 146 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQH 146 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCS
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-CCeEEEEec
Confidence 467888777776655544333333456655444 333 356777777753 566666643
No 143
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=42.83 E-value=1.2e+02 Score=25.65 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH-HhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHF-GVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+. .+...|+.++.++.+ .+++...++. +.++|+++
T Consensus 92 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~l~~~i~~-~~~~v~~~ 147 (412)
T 2cb1_A 92 LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE--PEAVREALSA-KTRAVFVE 147 (412)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS--HHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC--HHHHHHHhcc-CCeEEEEe
Confidence 5678888887776654433332 245567766666544 6777776643 56666664
No 144
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=42.64 E-value=1.6e+02 Score=25.21 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=38.6
Q ss_pred CCCCCEEEEEc-CCCHHHHHHHH---------HhhhccceeeecCC---CCCHHHHHHHHHh-cCceEEEEcC
Q 046637 61 ISPGDVVAALA-PNVPAMYELHF---------GVPMAGAVLCTLNT---RHDSAMVSVLLRH-SEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~-~n~~~~~~~~l---------A~~~~G~~~v~l~~---~~~~~~l~~~l~~-~~~~~vi~~~ 119 (301)
+++||.|.+.. +.-.... .++ .+...|+.+..++. ....+++...++. .++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~-~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLH-DIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGH-HHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHH-HHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 68999988876 4333222 222 23456877776654 2577889888875 6788888877
No 145
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=42.30 E-value=1.4e+02 Score=24.27 Aligned_cols=78 Identities=10% Similarity=-0.019 Sum_probs=45.5
Q ss_pred eeeeHHHHHHHH---HHHHHHHHh-cCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRC---VKLASGLAH-LGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~---~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+..... ......+.+ .++++|++|+|.+..+.--..+...+...|+.++.+.. +.+.+. .++..+++
T Consensus 111 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~Ga~ 187 (325)
T 3jyn_A 111 DSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS--SPEKAA-HAKALGAW 187 (325)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES--SHHHHH-HHHHHTCS
T ss_pred CCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC--CHHHHH-HHHHcCCC
Confidence 357777754221 112223444 48999999999996655544444444567887666643 344444 44566776
Q ss_pred EEEEc
Q 046637 114 IIFVD 118 (301)
Q Consensus 114 ~vi~~ 118 (301)
.++-.
T Consensus 188 ~~~~~ 192 (325)
T 3jyn_A 188 ETIDY 192 (325)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 66543
No 146
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=42.09 E-value=1.1e+02 Score=26.18 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=37.1
Q ss_pred HHhcCCCCCCEEEEEc-CCCHHHHHHH-------HHhhhccceeeecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 046637 56 LAHLGISPGDVVAALA-PNVPAMYELH-------FGVPMAGAVLCTLNTR----HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~-~n~~~~~~~~-------lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
|... +++||.|.+.. +......-.+ -.+...|+.++.++.. ...+++...++. ++++|+++.
T Consensus 100 l~al-~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~-~tk~V~i~~ 173 (431)
T 3ht4_A 100 LFGI-LRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHS-NTKMIGIQR 173 (431)
T ss_dssp HHTT-CCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCT-TEEEEEEEC
T ss_pred HHHh-CCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCC-CCeEEEEEC
Confidence 4433 67999888776 4433322211 1233467766665543 477888888864 678888774
No 147
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=42.02 E-value=19 Score=28.87 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCC--------HH-HHHHHHHhhh-ccceeeecC
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNV--------PA-MYELHFGVPM-AGAVLCTLN 95 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~--------~~-~~~~~lA~~~-~G~~~v~l~ 95 (301)
+.+...|+++||++||.|.+.+.-+ ++ ++-+++.++. -|-+++|-.
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~ 73 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQ 73 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEecc
Confidence 5677889999999999999876542 22 3334444443 455555653
No 148
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=41.79 E-value=47 Score=27.64 Aligned_cols=76 Identities=12% Similarity=-0.009 Sum_probs=43.2
Q ss_pred eeeeHHHHHHHHHH---HHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVK---LASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~---la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+....... ..+.|.+.++++|++|+|.+...+-..++.+|- ..|+.++.+....... .+++..+++.
T Consensus 151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak-~~Ga~Vi~~~~~~~~~---~~~~~lGa~~ 226 (360)
T 1piw_A 151 ENIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISRSSRKR---EDAMKMGADH 226 (360)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESSSTTH---HHHHHHTCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCCHHHH---HHHHHcCCCE
Confidence 35777764322211 123455578999999999999444555555554 5677666555432221 2334456666
Q ss_pred EEE
Q 046637 115 IFV 117 (301)
Q Consensus 115 vi~ 117 (301)
++-
T Consensus 227 v~~ 229 (360)
T 1piw_A 227 YIA 229 (360)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 149
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=41.70 E-value=1.3e+02 Score=26.08 Aligned_cols=100 Identities=10% Similarity=-0.000 Sum_probs=59.2
Q ss_pred CccEEEECC--e-eeeHHHH--HHHHHHHHHHH-HhcCC-CCCC----------------EEEEEcCCCHHHHHHHHHhh
Q 046637 29 DRPSVVYGD--V-QYTWKET--HQRCVKLASGL-AHLGI-SPGD----------------VVAALAPNVPAMYELHFGVP 85 (301)
Q Consensus 29 ~~~al~~~~--~-~~Ty~el--~~~~~~la~~L-~~~gv-~~g~----------------~V~i~~~n~~~~~~~~lA~~ 85 (301)
.++++..++ . +=|++.- ...+..++..+ .+.|+ .+|+ +..+....+=.-....++|.
T Consensus 101 ~~v~lK~E~~~p~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aSsGNhg~avA~~aa 180 (442)
T 3ss7_X 101 GQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSA 180 (442)
T ss_dssp SEEEEEEGGGCTTTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEECSSHHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEECCCHHHHHHHHHHH
Confidence 567777764 1 3355443 33444444432 45564 5665 23444444555556666777
Q ss_pred hccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhhHHHH
Q 046637 86 MAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIAQGA 128 (301)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 128 (301)
+.|.-++.+-|...+..-...++..++++++++....+.....
T Consensus 181 ~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~a~~~a 223 (442)
T 3ss7_X 181 RIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEG 223 (442)
T ss_dssp HHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHHHHHHH
T ss_pred HhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHH
Confidence 8887655444555556677788999999999987654444333
No 150
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=41.56 E-value=86 Score=25.73 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=45.5
Q ss_pred eeeeHHHHHHHHHH---HHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 38 VQYTWKETHQRCVK---LASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 38 ~~~Ty~el~~~~~~---la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
..+++.+....... .-+.|...++++|++|+|.+..+.-..++.+|- ..|+.++.+.. +.+.+. .++..+++.
T Consensus 136 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~ 211 (339)
T 1rjw_A 136 DNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADL 211 (339)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCE
Confidence 35677664322111 123355558999999999999666666666655 56876666643 344443 445677766
Q ss_pred EEE
Q 046637 115 IFV 117 (301)
Q Consensus 115 vi~ 117 (301)
++-
T Consensus 212 ~~d 214 (339)
T 1rjw_A 212 VVN 214 (339)
T ss_dssp EEC
T ss_pred Eec
Confidence 553
No 151
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=41.49 E-value=1e+02 Score=25.69 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=9.9
Q ss_pred CHHHHHHHHHhcCceEEEEc
Q 046637 99 DSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 99 ~~~~l~~~l~~~~~~~vi~~ 118 (301)
..+++...++..++++|+..
T Consensus 124 d~~~l~~~i~~~~~~~v~~~ 143 (416)
T 3isl_A 124 DPEDIIREIKKVKPKIVAMV 143 (416)
T ss_dssp CHHHHHHHHHHHCCSEEEEE
T ss_pred CHHHHHHHHhhCCCcEEEEE
Confidence 45555555553344444443
No 152
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=41.29 E-value=74 Score=26.59 Aligned_cols=77 Identities=14% Similarity=0.064 Sum_probs=44.5
Q ss_pred ee-eeHHHHHHHHHHH---HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQ-YTWKETHQRCVKL---ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~-~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
.. +++.+........ -+.|.+.++++|++|+|.+...+-..++.+|- ..|+.++.+... ++.+. .++..+++
T Consensus 165 ~~~ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~Vi~~~~~--~~~~~-~a~~lGa~ 240 (369)
T 1uuf_A 165 HPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTS--EAKRE-AAKALGAD 240 (369)
T ss_dssp SCGGGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS--GGGHH-HHHHHTCS
T ss_pred CCCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC--HHHHH-HHHHcCCc
Confidence 35 7887643222121 23455568999999999998545555555554 468765555433 22222 33456776
Q ss_pred EEEEc
Q 046637 114 IIFVD 118 (301)
Q Consensus 114 ~vi~~ 118 (301)
.++-.
T Consensus 241 ~vi~~ 245 (369)
T 1uuf_A 241 EVVNS 245 (369)
T ss_dssp EEEET
T ss_pred EEecc
Confidence 66543
No 153
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=41.14 E-value=74 Score=26.66 Aligned_cols=54 Identities=13% Similarity=0.046 Sum_probs=38.1
Q ss_pred cCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhh
Q 046637 71 APNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPI 124 (301)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (301)
...+=.-..+.++|.+.|..++.+-|...+.+....++..++++++++....+.
T Consensus 99 aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~a 152 (364)
T 4h27_A 99 SSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELLDEA 152 (364)
T ss_dssp CCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSSTTHH
T ss_pred eCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 333445556666777889866655566566778888999999999998755443
No 154
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=41.13 E-value=1.1e+02 Score=25.08 Aligned_cols=73 Identities=12% Similarity=0.013 Sum_probs=44.7
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.......... .| ...++++|++|+|.+..+.--..+...+...|+.++.+ .+.+.+ ..++..+++
T Consensus 121 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~---~~~~~~-~~~~~lGa~ 196 (343)
T 3gaz_A 121 AALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT---ARGSDL-EYVRDLGAT 196 (343)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE---ECHHHH-HHHHHHTSE
T ss_pred CCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE---eCHHHH-HHHHHcCCC
Confidence 35777776433333222 24 34589999999999966655444444445778866655 244444 455677887
Q ss_pred E
Q 046637 114 I 114 (301)
Q Consensus 114 ~ 114 (301)
.
T Consensus 197 ~ 197 (343)
T 3gaz_A 197 P 197 (343)
T ss_dssp E
T ss_pred E
Confidence 7
No 155
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=40.55 E-value=98 Score=25.30 Aligned_cols=87 Identities=13% Similarity=0.199 Sum_probs=52.3
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC--CCCHH---HHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT--RHDSA---MVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~---~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. .++...+..+...+...++.-.+++-..|. ..+++ .-++. ++...++..+++
T Consensus 171 N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~ 248 (313)
T 1toa_A 171 RYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGL--QGVSTASEASAHDMQELAAFIAQRKLP 248 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEE--ECSSCSSCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 3444555555555554433 344334556667777888888888765553 23333 33555 455556778999
Q ss_pred EEEEcCCchhhHHHHH
Q 046637 114 IIFVDYQLLPIAQGAF 129 (301)
Q Consensus 114 ~vi~~~~~~~~~~~~~ 129 (301)
+||++........+..
T Consensus 249 ~If~e~~~~~~~~~~l 264 (313)
T 1toa_A 249 AIFIESSIPHKNVEAL 264 (313)
T ss_dssp EEEEETTSCTHHHHHH
T ss_pred EEEEeCCCChHHHHHH
Confidence 9999987665544433
No 156
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=40.30 E-value=1.3e+02 Score=24.52 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+..+..... ...-.+...|+.++.+ ++. ...+++...++..++++|+...
T Consensus 74 ~~~gd~vi~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 74 LKPNDKILVVSNGVFGD-RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp CCTTCEEEEECSSHHHH-HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred cCCCCEEEEecCCcchH-HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 56788777765532211 1112234556554444 333 3678888888776677766653
No 157
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=40.17 E-value=21 Score=28.73 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=19.0
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCC
Q 046637 51 KLASGLAHLGISPGDVVAALAPN 73 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~n 73 (301)
.|...|+++||++||.|.+.+.-
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl 39 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSL 39 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECS
T ss_pred HHHHHHHHcCCCCCCEEEEEech
Confidence 46777999999999999987643
No 158
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=40.11 E-value=1.1e+02 Score=25.66 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=35.5
Q ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCce
Q 046637 55 GLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 55 ~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
.|...++++|++|+|++...+-..++.+|- ..|+ .++.+.. +++.+ .+++..+++
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~ 232 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGAR-LLGAACVIVGDQ--NPERL-KLLSDAGFE 232 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEES--CHHHH-HHHHTTTCE
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcC--CHHHH-HHHHHcCCc
Confidence 345568999999999997444555555554 4677 5665543 33443 456677886
No 159
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=40.10 E-value=98 Score=25.92 Aligned_cols=77 Identities=9% Similarity=0.019 Sum_probs=44.5
Q ss_pred eeeeHHHHHHHHHHHH---HHHHhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLA---SGLAHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la---~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.|.......++ ..|...+ +++|++|+|.+....-..++.+|- ..|+ .++.+.. +++. ..+++..++
T Consensus 166 ~~l~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~-~~~~~~lGa 241 (380)
T 1vj0_A 166 EKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIAR-SLGAENVIVIAG--SPNR-LKLAEEIGA 241 (380)
T ss_dssp TTSCHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHH-HTTBSEEEEEES--CHHH-HHHHHHTTC
T ss_pred CCCChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHH-HcCCceEEEEcC--CHHH-HHHHHHcCC
Confidence 3577774333332332 2344558 999999999994444455555544 5674 5555543 3333 344567788
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++..
T Consensus 242 ~~vi~~ 247 (380)
T 1vj0_A 242 DLTLNR 247 (380)
T ss_dssp SEEEET
T ss_pred cEEEec
Confidence 776653
No 160
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=40.01 E-value=61 Score=26.59 Aligned_cols=57 Identities=12% Similarity=0.080 Sum_probs=34.6
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
++||.|.+..+..+.+......+...|+.++.+ ++. ...+++...++. ++++++...
T Consensus 86 ~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 146 (382)
T 4hvk_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-DTILVSVQH 146 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-TEEEEECCS
T ss_pred CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-CceEEEEEC
Confidence 578888887777666555444444556655544 333 356777777753 556666653
No 161
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=39.87 E-value=97 Score=25.59 Aligned_cols=57 Identities=26% Similarity=0.258 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhcccee--eecCCC--CCHHHHHHHHHh-cCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVL--CTLNTR--HDSAMVSVLLRH-SEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~--v~l~~~--~~~~~l~~~l~~-~~~~~vi~~ 118 (301)
+++||.|.+..+...... ..-.+...|+.+ +++++. ...+++...++. -++++|+..
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~ 141 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVC 141 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEe
Confidence 467787777665443332 111123345544 444433 467788888764 356666654
No 162
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=39.70 E-value=22 Score=28.82 Aligned_cols=50 Identities=26% Similarity=0.256 Sum_probs=31.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCC--------HH-HHHHHHHhh-hccceeeec
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNV--------PA-MYELHFGVP-MAGAVLCTL 94 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--------~~-~~~~~lA~~-~~G~~~v~l 94 (301)
+.+|-++ |...|+++||++||.|.+.+.-+ ++ ++-+++..+ .-|-+++|-
T Consensus 20 ~~~T~~~-------L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt 79 (286)
T 3sma_A 20 ELVTRDR-------LASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPT 79 (286)
T ss_dssp CEECHHH-------HHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCcCHHH-------HHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEec
Confidence 4566555 45668899999999999875543 22 233333333 246666665
No 163
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=39.53 E-value=1.6e+02 Score=24.81 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecC--CC---CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLN--TR---HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~--~~---~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+.-..+.. ++...|..++ +++ .. ...+++...++..++++|+..
T Consensus 140 ~~~gd~Vi~~~~~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~ 201 (421)
T 3l8a_A 140 SEKGDAVLINSPVYYPFAR---TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLC 201 (421)
T ss_dssp SCTEEEEEEEESCCHHHHH---HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCCEEEECCCCcHHHHH---HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEEC
Confidence 3577888877766555433 3344565444 443 11 478899998876677777654
No 164
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=38.95 E-value=98 Score=25.48 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=10.2
Q ss_pred CCCCCEEEEEcCCCHHHH
Q 046637 61 ISPGDVVAALAPNVPAMY 78 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~ 78 (301)
+++||.|.+..+......
T Consensus 98 ~~~gd~vl~~~~~~~~~~ 115 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGII 115 (390)
T ss_dssp CCTTCEEEEETTCCHHHH
T ss_pred CCCCCEEEEecCcccHHH
Confidence 456666666655555443
No 165
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=38.44 E-value=1.7e+02 Score=24.15 Aligned_cols=76 Identities=9% Similarity=0.030 Sum_probs=45.4
Q ss_pred eeeHHHHHHHHHHHHH---HHH-hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 39 QYTWKETHQRCVKLAS---GLA-HLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 39 ~~Ty~el~~~~~~la~---~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
.+++.+.......++. .|. ..++++|++|+|.+.++.--..+.-.+...|+.++.+.. +.+.+. .++..+++.
T Consensus 142 ~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~ 218 (351)
T 1yb5_A 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG--TEEGQK-IVLQNGAHE 218 (351)
T ss_dssp TSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES--SHHHHH-HHHHTTCSE
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC--ChhHHH-HHHHcCCCE
Confidence 5777775333222222 343 358999999999998665544444444567886666543 344444 556677766
Q ss_pred EEE
Q 046637 115 IFV 117 (301)
Q Consensus 115 vi~ 117 (301)
++-
T Consensus 219 ~~d 221 (351)
T 1yb5_A 219 VFN 221 (351)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 166
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=37.76 E-value=1.8e+02 Score=24.29 Aligned_cols=22 Identities=9% Similarity=-0.059 Sum_probs=15.9
Q ss_pred CCCCCCCeeeechHHHHHHHHH
Q 046637 193 GTTSSPKGVICSHRGAYLNSLA 214 (301)
Q Consensus 193 GtTG~pK~v~~s~~~l~~~~~~ 214 (301)
|.+|.+-|.++....++.....
T Consensus 250 g~~G~r~G~~~~~~~~~~~~~~ 271 (422)
T 3fvs_A 250 SATGWKVGWVLGPDHIMKHLRT 271 (422)
T ss_dssp TCGGGCCEEEECCHHHHHHHHH
T ss_pred CCccceEEEEEeCHHHHHHHHH
Confidence 4467778999888887765544
No 167
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=37.67 E-value=94 Score=25.31 Aligned_cols=59 Identities=10% Similarity=-0.038 Sum_probs=39.5
Q ss_pred CCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchh
Q 046637 64 GDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 64 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
++.|...+ .+=.-..+.++|...|..++.+-|...++.....++..++++++++....+
T Consensus 54 ~~~vv~~s-sGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~~ 112 (318)
T 2rkb_A 54 CRHLVCSS-GGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWDE 112 (318)
T ss_dssp CCEEEECC-CSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSSHHH
T ss_pred CCEEEEEC-CchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECCCHHH
Confidence 34444433 344555566777788986666555555567778889999999998865433
No 168
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=37.48 E-value=1.3e+02 Score=24.86 Aligned_cols=77 Identities=16% Similarity=-0.021 Sum_probs=45.0
Q ss_pred eeeeHHHHHHHHHHHHHH---H-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLASG---L-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~---L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.......++.. | ...++++|++|+|.+..+.--..+...+...|+.++.+.. +.+.+... +..+++
T Consensus 133 ~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~--~~~~~~~~-~~~g~~ 209 (354)
T 2j8z_A 133 EGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG--SQKKLQMA-EKLGAA 209 (354)
T ss_dssp TTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--CHHHHHHH-HHHTCS
T ss_pred CCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC--CHHHHHHH-HHcCCc
Confidence 357887754333333333 3 2348999999999986655444444444467886666543 34444443 556666
Q ss_pred EEEE
Q 046637 114 IIFV 117 (301)
Q Consensus 114 ~vi~ 117 (301)
.++-
T Consensus 210 ~~~~ 213 (354)
T 2j8z_A 210 AGFN 213 (354)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5553
No 169
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=37.28 E-value=1.2e+02 Score=24.84 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=30.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+....+.- ++...|+.++.++ ...+++...++. ++++++..
T Consensus 110 ~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~v~--~d~~~l~~~l~~-~~~~v~~~ 161 (370)
T 2z61_A 110 IDDGDEVLIQNPCYPCYKN---FIRFLGAKPVFCD--FTVESLEEALSD-KTKAIIIN 161 (370)
T ss_dssp CCTTCEEEEESSCCTHHHH---HHHHTTCEEEEEC--SSHHHHHHHCCS-SEEEEEEE
T ss_pred cCCCCEEEEeCCCchhHHH---HHHHcCCEEEEeC--CCHHHHHHhccc-CceEEEEc
Confidence 3567777777666544332 3445676666665 566777776654 55555553
No 170
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=37.26 E-value=1.5e+02 Score=24.31 Aligned_cols=77 Identities=8% Similarity=0.126 Sum_probs=44.3
Q ss_pred eeeeHHHHHHHHHH---HHHHHHhcCCCCCCEEEEEcCC-CHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVK---LASGLAHLGISPGDVVAALAPN-VPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~---la~~L~~~gv~~g~~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+....... .-+.|...++++|++|+|.+.. .+-..++.++....|+.++.+.. +++.+. .++..+++
T Consensus 142 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~--~~~~~~-~~~~~g~~ 218 (347)
T 1jvb_A 142 RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV--REEAVE-AAKRAGAD 218 (347)
T ss_dssp SSSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES--SHHHHH-HHHHHTCS
T ss_pred CCCCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC--CHHHHH-HHHHhCCC
Confidence 45677664322211 1233555689999999999998 44555555554332877666543 334433 33555666
Q ss_pred EEEE
Q 046637 114 IIFV 117 (301)
Q Consensus 114 ~vi~ 117 (301)
.++-
T Consensus 219 ~~~~ 222 (347)
T 1jvb_A 219 YVIN 222 (347)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6554
No 171
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=37.13 E-value=56 Score=21.16 Aligned_cols=11 Identities=9% Similarity=-0.031 Sum_probs=5.1
Q ss_pred CCEEEEEcCCC
Q 046637 64 GDVVAALAPNV 74 (301)
Q Consensus 64 g~~V~i~~~n~ 74 (301)
...|.|.+...
T Consensus 57 ~~~V~I~aD~~ 67 (99)
T 2pfu_A 57 DTTIFFRADKT 67 (99)
T ss_dssp SSCEEEEECTT
T ss_pred CceEEEEcCCC
Confidence 33455554443
No 172
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=36.96 E-value=1.6e+02 Score=23.65 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=38.8
Q ss_pred HHhcCC-CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 56 LAHLGI-SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 56 L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
+.+.|. +++ .| ....+=.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 58 a~~~g~~~~~-vv--~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 58 AEKRGLLKNG-IV--EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGE 120 (303)
T ss_dssp HHHTTCCTTC-EE--EECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCC-EE--EECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344453 444 33 333344445556667788886555545445566777889999999998764
No 173
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=36.86 E-value=88 Score=25.53 Aligned_cols=82 Identities=7% Similarity=0.042 Sum_probs=51.3
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--CCHH---HHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--HDSA---MVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. ++....+..+...+...++.--+++-..+. ..+.+. -++. ++...++..+.+
T Consensus 164 Na~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~--~~i~~~~ePs~~~l~~l~~~ik~~~v~ 241 (307)
T 3ujp_A 164 NAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVP 241 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSCCSSCCCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEe--eccCCCCCCCHHHHHHHHHHHHhcCCc
Confidence 3455666666666666543 343345666667777888877777764432 234443 3444 556666788999
Q ss_pred EEEEcCCchhh
Q 046637 114 IIFVDYQLLPI 124 (301)
Q Consensus 114 ~vi~~~~~~~~ 124 (301)
+||++...-..
T Consensus 242 ~If~e~~~~~k 252 (307)
T 3ujp_A 242 TIFCESTVSDK 252 (307)
T ss_dssp EEEEETTSCSH
T ss_pred EEEEeCCCChH
Confidence 99999876654
No 174
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=36.38 E-value=1.2e+02 Score=24.96 Aligned_cols=54 Identities=9% Similarity=0.021 Sum_probs=34.1
Q ss_pred CCCCCCEEEEEcCCCHHHHHHHHHhhhc-cceeeecCCCCCHHHHHHHHHhcCceEEEE
Q 046637 60 GISPGDVVAALAPNVPAMYELHFGVPMA-GAVLCTLNTRHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~~~~~~lA~~~~-G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (301)
++ +|++|+|.+...+-..++.+|-... |+.++.+.. +++.+ .+++..+++.++-
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~ 222 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKHR-DFALELGADYVSE 222 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHHH-HHHHHHTCSEEEC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHHH-HHHHHhCCCEEec
Confidence 78 9999999999444555556555432 776666543 33333 3445667766653
No 175
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=36.11 E-value=1.1e+02 Score=25.17 Aligned_cols=86 Identities=8% Similarity=0.047 Sum_probs=51.8
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--CCHH---HHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--HDSA---MVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. .+....+..+...+...++.-.+++-..|. ..+++. -++. ++...++..+.+
T Consensus 178 Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~ 255 (321)
T 1xvl_A 178 NAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVP 255 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSSSSCSCCHHHHHHHHHHHHTTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCc
Confidence 3455555555555555542 333334555666777888888787765552 334333 3454 455556778999
Q ss_pred EEEEcCCchhhHHHH
Q 046637 114 IIFVDYQLLPIAQGA 128 (301)
Q Consensus 114 ~vi~~~~~~~~~~~~ 128 (301)
+||++........+.
T Consensus 256 ~If~e~~~~~~~~~~ 270 (321)
T 1xvl_A 256 TIFCESTVSDKGQKQ 270 (321)
T ss_dssp EEEEETTSCSHHHHH
T ss_pred EEEEeCCCChHHHHH
Confidence 999998776554333
No 176
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=35.21 E-value=1.8e+02 Score=24.05 Aligned_cols=58 Identities=12% Similarity=0.190 Sum_probs=36.7
Q ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 57 AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 57 ~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
...++++|++|+|.+...+-..++.+|- ..|+ .++.+.. +++. ..+++..+++.++..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~~Vi~~~~--~~~~-~~~a~~lGa~~vi~~ 242 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAK-VCGASIIIAVDI--VESR-LELAKQLGATHVINS 242 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHH-HHTCSEEEEEES--CHHH-HHHHHHHTCSEEEET
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEECC--CHHH-HHHHHHcCCCEEecC
Confidence 3458999999999996444555555554 4677 4555543 2333 344566777776654
No 177
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=35.18 E-value=1.1e+02 Score=25.13 Aligned_cols=77 Identities=10% Similarity=-0.026 Sum_probs=44.3
Q ss_pred eeeeHHHHHH----HHHHHHHHHHhcCCCCCCEEEEEcCCC-HHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQ----RCVKLASGLAHLGISPGDVVAALAPNV-PAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~----~~~~la~~L~~~gv~~g~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+... -...+.......++++|++|+|.+..+ +-..++.+| ...|+.++.+..+... + ..++..++
T Consensus 115 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~--~-~~~~~lga 190 (340)
T 3gms_A 115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKH--T-EELLRLGA 190 (340)
T ss_dssp TTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTT--H-HHHHHHTC
T ss_pred CCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHH--H-HHHHhCCC
Confidence 3577777642 222222222445899999999999885 555555554 4668876666543222 2 23344567
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++-.
T Consensus 191 ~~~~~~ 196 (340)
T 3gms_A 191 AYVIDT 196 (340)
T ss_dssp SEEEET
T ss_pred cEEEeC
Confidence 766643
No 178
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=35.11 E-value=1.1e+02 Score=24.59 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=44.6
Q ss_pred HHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHH
Q 046637 18 SFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMY 78 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~ 78 (301)
..++...+.-|+...+.+.| ..-++.++.+++...+..|.+.|++ ..++.-|....+
T Consensus 38 tv~~~i~~~lP~e~~iy~~D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~d----~IVIACNTa~~~ 100 (274)
T 3uhf_A 38 SVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQID----MLIIACNTASAY 100 (274)
T ss_dssp HHHHHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCS----EEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChhHH
Confidence 56677777888887777765 4789999999999999999887765 777777766543
No 179
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=35.05 E-value=95 Score=25.71 Aligned_cols=79 Identities=13% Similarity=0.079 Sum_probs=46.4
Q ss_pred eeeeHHHHHHHHHHH---HHHHHhcCCC-CCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKL---ASGLAHLGIS-PGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~l---a~~L~~~gv~-~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+........ -+.|.+.+++ +|++|+|.+...+-..++.+|- ..|+.++.+... ++.+....+..+++
T Consensus 151 ~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~~~--~~~~~~~~~~lGa~ 227 (357)
T 2cf5_A 151 EGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAK-AMGHHVTVISSS--NKKREEALQDLGAD 227 (357)
T ss_dssp SSCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESS--TTHHHHHHTTSCCS
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeCC--hHHHHHHHHHcCCc
Confidence 457777643221111 1335566888 9999999987545555555554 468766655443 33444444467777
Q ss_pred EEEEcC
Q 046637 114 IIFVDY 119 (301)
Q Consensus 114 ~vi~~~ 119 (301)
.++...
T Consensus 228 ~vi~~~ 233 (357)
T 2cf5_A 228 DYVIGS 233 (357)
T ss_dssp CEEETT
T ss_pred eeeccc
Confidence 666543
No 180
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=34.81 E-value=1.4e+02 Score=24.58 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC--CCHHHHHHHHHhcCceEEEE
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR--HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~--~~~~~l~~~l~~~~~~~vi~ 117 (301)
++||.|.+..+....+. ..-++...|+.++ +++++ ...+++...++..++++|+.
T Consensus 91 ~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~ 149 (396)
T 2ch1_A 91 EEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFL 149 (396)
T ss_dssp CTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEE
Confidence 45666666555433321 1112334454333 33222 34566666665434444444
No 181
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=34.75 E-value=2e+02 Score=23.96 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=35.3
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CCCC--CHHHHHHHHHhcCceEEEEcC
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NTRH--DSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~--~~~~l~~~l~~~~~~~vi~~~ 119 (301)
++||.|.+..+..+.+......+...|+.++.+ ++.. ..+++...++. ++++++...
T Consensus 111 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 171 (423)
T 3lvm_A 111 KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-DTILVSIMH 171 (423)
T ss_dssp TTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-TEEEEECCS
T ss_pred cCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-CcEEEEEeC
Confidence 468888887777666554444444556655444 4332 56788877754 567776653
No 182
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=34.73 E-value=1.3e+02 Score=25.36 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=33.6
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH-HhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHF-GVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-..+...+- ++...|+.++.++.. ..+++...++. ++++|+..
T Consensus 98 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~t~~v~l~ 154 (404)
T 1e5e_A 98 LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-IPGEVKKHMKP-NTKIVYFE 154 (404)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-STTHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCC-CCcEEEEE
Confidence 4678888887776655443221 345567766666544 45666666643 56666664
No 183
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=34.70 E-value=1.8e+02 Score=23.48 Aligned_cols=76 Identities=12% Similarity=-0.028 Sum_probs=44.3
Q ss_pred eeeHHHHHHHHHHHHHH---HH-hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceE
Q 046637 39 QYTWKETHQRCVKLASG---LA-HLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKI 114 (301)
Q Consensus 39 ~~Ty~el~~~~~~la~~---L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (301)
.+++.+.......++.. |. ..++++|++|.|.+..+.--..+.-.+...|+.++.+.. +.+.+.. ++..+++.
T Consensus 112 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~--~~~~~~~-~~~~g~~~ 188 (327)
T 1qor_A 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG--TAQKAQS-ALKAGAWQ 188 (327)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES--SHHHHHH-HHHHTCSE
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC--CHHHHHH-HHHcCCCE
Confidence 57887764444433332 33 348999999999996655444444444566876666543 3444333 34456665
Q ss_pred EEE
Q 046637 115 IFV 117 (301)
Q Consensus 115 vi~ 117 (301)
++-
T Consensus 189 ~~~ 191 (327)
T 1qor_A 189 VIN 191 (327)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 184
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=34.64 E-value=2.1e+02 Score=24.17 Aligned_cols=54 Identities=7% Similarity=-0.035 Sum_probs=38.7
Q ss_pred cCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchhh
Q 046637 71 APNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPI 124 (301)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 124 (301)
...+=.-....++|...|..++.+-|...+..-...++..++++++++....+.
T Consensus 118 aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~a 171 (398)
T 4d9i_A 118 TTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDT 171 (398)
T ss_dssp ECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSCHHHH
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 444555566667788889876655566666777788899999999998765443
No 185
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=34.58 E-value=1.1e+02 Score=25.29 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=29.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHH-HHhhhccceee--ecCCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELH-FGVPMAGAVLC--TLNTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v--~l~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+..+........+ -.+...|+.++ ++++. ...+++...++. ++++|+...
T Consensus 110 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 172 (406)
T 1kmj_A 110 VRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE-KTRLLAITH 172 (406)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-TEEEEEEES
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-CCeEEEEeC
Confidence 467787777766544322221 12233455443 33332 245666666643 556666543
No 186
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=34.41 E-value=1.7e+02 Score=29.33 Aligned_cols=80 Identities=9% Similarity=-0.147 Sum_probs=59.7
Q ss_pred eeechHHHHHHHHHHHHHh---hCCCCCEEEEeccchhhhhhHHHHHHHHhCCeEEeeC-CCCHHHHHHHHHhcCcceec
Q 046637 201 VICSHRGAYLNSLAAALFN---EMGLMPTYLWCVPMFHCNGWCLTWAVAAQGGTNVCQR-TVNAKEIFDNITRHKVTHFG 276 (301)
Q Consensus 201 v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~h~~g~~~~~~~l~~g~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 276 (301)
..+|+..|...+..+...+ +..+++++..+++-+- --...+++++..|+..|.++ ....+.+...++..++..+.
T Consensus 488 ~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~-~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl 566 (1304)
T 2vsq_A 488 QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSL-ELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLL 566 (1304)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSH-HHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEE
T ss_pred eeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCH-HHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEE
Confidence 4689999887766665544 6788999888887543 22334688899999988885 56678888889999999888
Q ss_pred CChHH
Q 046637 277 GAPTV 281 (301)
Q Consensus 277 ~~P~~ 281 (301)
+.+..
T Consensus 567 ~~~~~ 571 (1304)
T 2vsq_A 567 THQEM 571 (1304)
T ss_dssp ECSTT
T ss_pred ECcch
Confidence 76543
No 187
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=34.41 E-value=1.3e+02 Score=24.94 Aligned_cols=62 Identities=16% Similarity=0.245 Sum_probs=39.2
Q ss_pred HHHhcCCC-CCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 55 GLAHLGIS-PGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 55 ~L~~~gv~-~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
.|...+++ +|++|+|.+...+-..++.+|- ..|+.++.+.. +++.+....+..+++.++-..
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEETT
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEecc
Confidence 35566888 9999999997545555555554 56876555543 334444445577777666433
No 188
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=34.40 E-value=1.5e+02 Score=24.13 Aligned_cols=86 Identities=9% Similarity=0.018 Sum_probs=48.2
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHH---HHhcCceEE
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVL---LRHSEAKII 115 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~---l~~~~~~~v 115 (301)
.++++.++.+.+-..+++. .+ ++ +..+...+...++.--+++-..|..-+.-...-++.++..+ ++..++++|
T Consensus 166 N~~~~~~~L~~Ld~~~~~~l~~~-~~-~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~I 243 (312)
T 2o1e_A 166 NSKEYIAKLQDLDKLYRTTAKKA-EK-KEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVI 243 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSC-SC-CEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-CC-CEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3444555555554444432 33 33 44566677777777777776554322111223455555554 566788999
Q ss_pred EEcCCchhhHHHH
Q 046637 116 FVDYQLLPIAQGA 128 (301)
Q Consensus 116 i~~~~~~~~~~~~ 128 (301)
|++........+.
T Consensus 244 f~e~~~~~~~~~~ 256 (312)
T 2o1e_A 244 YFEEIASSKVADT 256 (312)
T ss_dssp ECSSCCCHHHHHH
T ss_pred EEeCCCChHHHHH
Confidence 9998776554333
No 189
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=34.37 E-value=1.2e+02 Score=25.32 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=34.4
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCC---CCCHHHHHHHHHhcCceEEEEc
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNT---RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~---~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+...++++||.|.+..+....+.. ++...|+.++ ++++ ....+++...++. ++++|+..
T Consensus 95 l~~~~~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 158 (399)
T 2oga_A 95 LRGLGIGPGDEVIVPSHTYIASWL---AVSATGATPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPV 158 (399)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHH---HHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCB
T ss_pred HHHhCCCCcCEEEECCCccHHHHH---HHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEe
Confidence 344456788888887776554332 3345565444 4433 2456777777753 56666654
No 190
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=34.30 E-value=1.2e+02 Score=25.02 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=35.3
Q ss_pred HHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeee--cCCC---CCHHHHHHHHHhcCceEEEE
Q 046637 56 LAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCT--LNTR---HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~--l~~~---~~~~~l~~~l~~~~~~~vi~ 117 (301)
+...++++||.|.+..+....... ++...|+.++. +++. ...+++...++. +.++|+.
T Consensus 70 l~~l~~~~gd~Vi~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 132 (388)
T 1b9h_A 70 LQVMGVGPGTEVIVPAFTFISSSQ---AAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMP 132 (388)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHH---HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred HHHcCCCCcCEEEECCCccHHHHH---HHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 444457889988887776655542 34556765544 4432 467778777743 5566663
No 191
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=34.19 E-value=1.3e+02 Score=24.99 Aligned_cols=57 Identities=14% Similarity=0.031 Sum_probs=36.0
Q ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 58 HLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 58 ~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
..++++|++|+|++.-.+-..++.+|- ..|+ .++.+... ++. ..+++..+++.++-.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~~a~~lGa~~vi~~ 243 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCK-AAGASRIIGVGTH--KDK-FPKAIELGATECLNP 243 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECSC--GGG-HHHHHHTTCSEEECG
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEECCC--HHH-HHHHHHcCCcEEEec
Confidence 458999999999997444555555554 5677 56555433 222 234566788776654
No 192
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.97 E-value=1.5e+02 Score=22.31 Aligned_cols=55 Identities=5% Similarity=-0.019 Sum_probs=41.9
Q ss_pred EEEEEcCC----CHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 66 VVAALAPN----VPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 66 ~V~i~~~n----~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
+|.+.... .....+....+-..|.-++.+....+.+++...++..++++|..+..
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSAL 148 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECC
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 55555433 23444555556678999999999999999999999999999988764
No 193
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=33.91 E-value=1.1e+02 Score=25.61 Aligned_cols=57 Identities=21% Similarity=0.220 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH-Hhhhccceee--ecCCC--CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHF-GVPMAGAVLC--TLNTR--HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v--~l~~~--~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+. ++...|+.++ +++.. ...+++...++. ++++|+..
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 176 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-KTKLVTVV 176 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-CceEEEEe
Confidence 4667777766665554322221 2223454443 33322 345666666643 45555554
No 194
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=33.81 E-value=1.6e+02 Score=24.12 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=44.7
Q ss_pred eeeeHHHHHHHHHHHHH---HHHh-cCCCCCCEEEEEcCCC-HHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLAS---GLAH-LGISPGDVVAALAPNV-PAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L~~-~gv~~g~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......++. .|.+ .++++|++|+|.+..+ .-..++.++. ..|+.++.+.. +.+.+.. ++..++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~-~~G~~Vi~~~~--~~~~~~~-~~~~ga 212 (343)
T 2eih_A 137 KNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAK-LFGARVIATAG--SEDKLRR-AKALGA 212 (343)
T ss_dssp TTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHH-HTTCEEEEEES--SHHHHHH-HHHHTC
T ss_pred CCCCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeC--CHHHHHH-HHhcCC
Confidence 46788876544444433 3444 3899999999999854 5555555544 56876665543 3444433 345566
Q ss_pred eEEE
Q 046637 113 KIIF 116 (301)
Q Consensus 113 ~~vi 116 (301)
+.++
T Consensus 213 ~~~~ 216 (343)
T 2eih_A 213 DETV 216 (343)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 6554
No 195
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=33.35 E-value=1.1e+02 Score=25.60 Aligned_cols=59 Identities=12% Similarity=-0.018 Sum_probs=39.5
Q ss_pred CCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchh
Q 046637 64 GDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 64 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
++.|.-.. .+=--..+.++|...|..++.+-|...+..-...++..++++++++....+
T Consensus 93 ~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 151 (372)
T 1p5j_A 93 CAHFVCSS-AGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELLDE 151 (372)
T ss_dssp CCEEEECC-SSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSCHHH
T ss_pred CCEEEEeC-CCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCCHHH
Confidence 33444333 344555556677888987666556555677778889999999998875443
No 196
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=32.98 E-value=1e+02 Score=25.54 Aligned_cols=55 Identities=13% Similarity=-0.090 Sum_probs=36.5
Q ss_pred EEcCCCHHHHHHHHHhhhccceeeecCCCC-CHHHHHHHHHhcCceEEEEcCCchh
Q 046637 69 ALAPNVPAMYELHFGVPMAGAVLCTLNTRH-DSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 69 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
+....+=.-..+.++|...|..++.+-|.. .+..-...++..++++++++....+
T Consensus 81 v~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~~~ 136 (351)
T 3aey_A 81 ACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNFDD 136 (351)
T ss_dssp EESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCHHH
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 333444444555577788898666555543 4566667889999999999876433
No 197
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=32.81 E-value=1.7e+02 Score=24.25 Aligned_cols=80 Identities=6% Similarity=0.099 Sum_probs=48.4
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCC-----CCCEEEEEcCCC-HHHHHHHHHhhhccceeeecCCCCCHHHHHHHH
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGIS-----PGDVVAALAPNV-PAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLL 107 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~-----~g~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (301)
..+++.+.......... .| ...+++ +|++|+|.+..+ +-..++.+|-...|+.++.+... ++. ..++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~--~~~-~~~~ 213 (363)
T 4dvj_A 137 KTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR--PET-QEWV 213 (363)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS--HHH-HHHH
T ss_pred CCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC--HHH-HHHH
Confidence 35677776543322222 23 234777 899999999554 55666666655567777776543 333 3455
Q ss_pred HhcCceEEEEcCC
Q 046637 108 RHSEAKIIFVDYQ 120 (301)
Q Consensus 108 ~~~~~~~vi~~~~ 120 (301)
+..+++.++...+
T Consensus 214 ~~lGad~vi~~~~ 226 (363)
T 4dvj_A 214 KSLGAHHVIDHSK 226 (363)
T ss_dssp HHTTCSEEECTTS
T ss_pred HHcCCCEEEeCCC
Confidence 6788887776543
No 198
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=32.61 E-value=1.2e+02 Score=25.18 Aligned_cols=53 Identities=17% Similarity=-0.058 Sum_probs=36.3
Q ss_pred cCCCHHHHHHHHHhhhccceeeecCCCC-CHHHHHHHHHhcCceEEEEcCCchh
Q 046637 71 APNVPAMYELHFGVPMAGAVLCTLNTRH-DSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 71 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
...+=.-..+.++|...|.-++.+-|.. .+..-...++..++++++++....+
T Consensus 91 aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~ 144 (360)
T 2d1f_A 91 ASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGNFDD 144 (360)
T ss_dssp CCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSCHHH
T ss_pred eCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 3344444545577788898766665654 5566667889999999999876433
No 199
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=32.58 E-value=1.7e+02 Score=23.94 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=30.0
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CC--CCCHHHHHHHHHhcCceEEEEc
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NT--RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~--~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
++||.|.+..+....+.. ++...|+.++.+ +. ....+++...++..++++|++.
T Consensus 114 ~~gd~Vl~~~~~y~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 171 (369)
T 3cq5_A 114 GPGRTALGFQPSYSMHPI---LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT 171 (369)
T ss_dssp STTCEEEEEESSCTHHHH---HHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred CCCCEEEEcCCChHHHHH---HHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEe
Confidence 567777777665544332 334456544433 33 2356777777765456666553
No 200
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=32.53 E-value=1.6e+02 Score=23.59 Aligned_cols=84 Identities=12% Similarity=0.171 Sum_probs=50.8
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--CCHH---HHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--HDSA---MVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~~---~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. .+ ++..+ +...+...++.--+++-..|.. .+++. -++. ++...++..+++
T Consensus 155 N~~~~~~~L~~Ld~~~~~~l~~~-~~~~~-v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~ 230 (286)
T 3gi1_A 155 NAKAFKKEAEQLTEEYTQKFKKV-RSKTF-VTQHTAFSYLAKRFGLKQLGIS--GISPEQEPSPRQLKEIQDFVKEYNVK 230 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-SCCEE-EEEESCCHHHHHHTTCEEEEEE--CSCC---CCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EEECCchHHHHHHCCCeEeecc--ccCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 3555566666665555543 23 34444 5566678888877777665522 23332 3444 555666778999
Q ss_pred EEEEcCCchhhHHHH
Q 046637 114 IIFVDYQLLPIAQGA 128 (301)
Q Consensus 114 ~vi~~~~~~~~~~~~ 128 (301)
+||++........+.
T Consensus 231 ~if~e~~~~~~~~~~ 245 (286)
T 3gi1_A 231 TIFAEDNVNPKIAHA 245 (286)
T ss_dssp EEEECTTSCTHHHHH
T ss_pred EEEEeCCCChHHHHH
Confidence 999998776554443
No 201
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=32.40 E-value=2e+02 Score=23.40 Aligned_cols=93 Identities=14% Similarity=0.103 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC----CCHHHHHHHHHh-cCceEEEEcC----
Q 046637 49 CVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR----HDSAMVSVLLRH-SEAKIIFVDY---- 119 (301)
Q Consensus 49 ~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~-~~~~~vi~~~---- 119 (301)
...+...+... +++||.|.+..+..... ...-++...|+.++.++.. ...+++...++. -++++|+...
T Consensus 81 t~a~~~~~~~l-~~~gd~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~np 158 (386)
T 2dr1_A 81 TGIMEASIRNG-VSKGGKVLVTIIGAFGK-RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETS 158 (386)
T ss_dssp HHHHHHHHHHH-SCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETT
T ss_pred HHHHHHHHHHh-hcCCCeEEEEcCCchhH-HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCC
Q ss_pred -CchhhHHHHHHHhccccCCCCceEEccC
Q 046637 120 -QLLPIAQGAFEILSKTSAKLPLLVLVPE 147 (301)
Q Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 147 (301)
.....+.++.+.+. ....++++|+
T Consensus 159 tG~~~~l~~i~~l~~----~~~~~li~D~ 183 (386)
T 2dr1_A 159 TGVLNPLPELAKVAK----EHDKLVFVDA 183 (386)
T ss_dssp TTEECCHHHHHHHHH----HTTCEEEEEC
T ss_pred cchhCCHHHHHHHHH----HcCCeEEEEc
No 202
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=32.31 E-value=2e+02 Score=23.41 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC---C--CCHHHHHHHHHhcCceEEEEc
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT---R--HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~--~~~~~l~~~l~~~~~~~vi~~ 118 (301)
++||.|.+..+....... .-++...|+.++.++. . ...+++...++..++++|+..
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 678887766443222221 1234455765554433 2 467888888865456666654
No 203
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=32.27 E-value=1.3e+02 Score=25.55 Aligned_cols=53 Identities=17% Similarity=0.379 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC-----CCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-----HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++||.|.+..+....... ++...|+.++.++.. ...+++...++. ++++|+.
T Consensus 107 ~~~gd~Vi~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 164 (437)
T 3bb8_A 107 LKPGDEVITVAAGFPTTVN---PTIQNGLIPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMI 164 (437)
T ss_dssp CCTTCEEEECSSSCHHHHH---HHHHTTCEEEECCEETTTTEECGGGHHHHCCT-TEEEEEE
T ss_pred CCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEeccCccCCcCHHHHHHhcCC-CCeEEEE
Confidence 7788888887766555443 334567665555332 245677766643 4566555
No 204
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=32.24 E-value=1.4e+02 Score=24.53 Aligned_cols=69 Identities=16% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 046637 49 CVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR----HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 49 ~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+..+...++.. +++||.|.+. .++.-.....-++...|+.++.++.. ...+++...++..++++|+...
T Consensus 84 ~~al~~~~~~~-~~~gd~vl~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 156 (393)
T 3kgw_A 84 HCAMETALFNL-LEPGDSFLTG-TNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVH 156 (393)
T ss_dssp TTHHHHHHHHH-CCTTCEEEEE-ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHhc-CCCCCEEEEE-eCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEec
No 205
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=32.19 E-value=1.5e+02 Score=24.57 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=44.6
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......++. .+ ...++++|++|+|.+.-.+-..++.+|- ..|+ .++.+... ++. ..+++..++
T Consensus 166 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~~a~~lGa 241 (376)
T 1e3i_A 166 DEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCK-IAGASRIIAIDIN--GEK-FPKAKALGA 241 (376)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--GGG-HHHHHHTTC
T ss_pred CCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCC--HHH-HHHHHHhCC
Confidence 45788775433222222 23 3458999999999997444455555554 5687 56555433 222 234466777
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++-.
T Consensus 242 ~~vi~~ 247 (376)
T 1e3i_A 242 TDCLNP 247 (376)
T ss_dssp SEEECG
T ss_pred cEEEcc
Confidence 766643
No 206
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=32.10 E-value=2e+02 Score=23.89 Aligned_cols=55 Identities=7% Similarity=0.055 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC-----CCCHHHHHHHHHhc---Cce-EEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT-----RHDSAMVSVLLRHS---EAK-IIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~---~~~-~vi~~ 118 (301)
+++||.|.+..|.-..+.- ++...|+.++.++. ....+++...++.. +.+ ++++.
T Consensus 122 ~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 185 (413)
T 3t18_A 122 LDEGDPLICHDYYWAPYRK---ICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLIN 185 (413)
T ss_dssp CCSSCEEEEESSCCTHHHH---HHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCcccHHH---HHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 4689999888876555432 33455665555542 44678888888753 455 45544
No 207
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A
Probab=32.08 E-value=13 Score=25.42 Aligned_cols=54 Identities=20% Similarity=0.211 Sum_probs=32.0
Q ss_pred CCCCHHHHHHHHhhhc-CCccEEEECC-----eee---eHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCC
Q 046637 12 VPLTPISFLERSAVVY-RDRPSVVYGD-----VQY---TWKETHQRCVKLASGLAHLGISPGDVVAALAPN 73 (301)
Q Consensus 12 ~~~~~~~~l~~~~~~~-~~~~al~~~~-----~~~---Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n 73 (301)
.+..+.+.++...+.. ||+++.+... +++ |-+|+.+. +.+.++ +|+.|.|+.++
T Consensus 51 sp~Rl~~~l~~L~~~~g~~~~v~v~relTk~~E~~~rgtl~el~~~-------~~~~~~-kGe~vivv~~~ 113 (115)
T 3ffy_A 51 SPHRLLKTLTQFAEYFGPERQVSVSREISKIHEETVRGTLSELIEH-------FTATDP-RGEIVIVLAGI 113 (115)
T ss_dssp CTTTHHHHHHHHHHHHCTTCEEEEEEESSSSCEEEEEEEHHHHHHH-------HHHSCC-CSSEEEEECCC
T ss_pred chHHHHHHHHHHHHhcCCCCEEEeeeccCCCceEEEEeeHHHHHHH-------HHhcCC-CCCEEEEEeCC
Confidence 4556777777776666 4777666533 333 44444433 333444 68888888764
No 208
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=32.05 E-value=1.8e+02 Score=24.03 Aligned_cols=20 Identities=5% Similarity=0.169 Sum_probs=10.1
Q ss_pred CHHHHHHHHHhcCceEEEEc
Q 046637 99 DSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 99 ~~~~l~~~l~~~~~~~vi~~ 118 (301)
..+++...++..++++|+..
T Consensus 126 d~~~l~~~i~~~~~~~v~~~ 145 (411)
T 3nnk_A 126 TPDQVEDAVKRIRPRLLLTV 145 (411)
T ss_dssp CHHHHHHHHHHHCCSEEEEE
T ss_pred CHHHHHHHHhhCCCeEEEEe
Confidence 45556555554344444443
No 209
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=31.56 E-value=87 Score=26.82 Aligned_cols=50 Identities=26% Similarity=0.161 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCEEEEEcCCC-HHH-HHHHHHhhhccceeeec
Q 046637 45 THQRCVKLASGLAHL--GISPGDVVAALAPNV-PAM-YELHFGVPMAGAVLCTL 94 (301)
Q Consensus 45 l~~~~~~la~~L~~~--gv~~g~~V~i~~~n~-~~~-~~~~lA~~~~G~~~v~l 94 (301)
+..+.+++|..+.+. ++++|+.|.|..+-. .++ -.+.-++...|+.++.+
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v 57 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTV 57 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEE
Confidence 355677788888764 789999999988754 333 45566778899977753
No 210
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=31.12 E-value=1.3e+02 Score=24.31 Aligned_cols=85 Identities=8% Similarity=0.061 Sum_probs=50.9
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHH---HHHHHHhcCceEE
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAM---VSVLLRHSEAKII 115 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~v 115 (301)
.++++.++.+.+-..+++. .+ ++ +..+...+...++.--+++-..|..- ....-++.+ +...++..+.++|
T Consensus 166 N~~~~~~~L~~Ld~~~~~~l~~~-~~-~~~v~~H~af~Yf~~~yGl~~~~~~~--~~~eps~~~l~~l~~~ik~~~v~~I 241 (291)
T 1pq4_A 166 NLAAFLAELERLNQELGQILQPL-PQ-RKFIVFHPSWAYFARDYNLVQIPIEV--EGQEPSAQELKQLIDTAKENNLTMV 241 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-SC-CEEEESSCCCHHHHHHTTCEEEESCB--TTBCCCHHHHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CC-CEEEEECCchHHHHHHCCCEEeeccc--CCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 3455555555555555433 23 34 44566777888888888777665432 233345554 5555677889999
Q ss_pred EEcCCchhhHHHHH
Q 046637 116 FVDYQLLPIAQGAF 129 (301)
Q Consensus 116 i~~~~~~~~~~~~~ 129 (301)
|++........+..
T Consensus 242 f~e~~~~~~~~~~i 255 (291)
T 1pq4_A 242 FGETQFSTKSSEAI 255 (291)
T ss_dssp EEETTSCCHHHHHH
T ss_pred EEeCCCChHHHHHH
Confidence 99887665544433
No 211
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=30.89 E-value=1.3e+02 Score=24.64 Aligned_cols=74 Identities=11% Similarity=0.037 Sum_probs=42.4
Q ss_pred eeeeHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCce
Q 046637 38 VQYTWKETHQRCVKLA---SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
..+++.+.... ..++ +.|...++ +|++|+|.+...+-..++.+|- ..|+ .++.+..+ ++. ...++..+++
T Consensus 141 ~~~~~~~aa~~-~~~~ta~~~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~-~~Ga~~Vi~~~~~--~~~-~~~~~~~Ga~ 214 (348)
T 2d8a_A 141 KSIPPEYATLQ-EPLGNAVDTVLAGPI-SGKSVLITGAGPLGLLGIAVAK-ASGAYPVIVSEPS--DFR-RELAKKVGAD 214 (348)
T ss_dssp TTSCHHHHTTH-HHHHHHHHHHTTSCC-TTCCEEEECCSHHHHHHHHHHH-HTTCCSEEEECSC--HHH-HHHHHHHTCS
T ss_pred CCCCHHHHHhh-hHHHHHHHHHHhcCC-CCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHH-HHHHHHhCCC
Confidence 34677664322 1222 23445588 9999999999434455555444 5687 56665443 333 3445566777
Q ss_pred EEEE
Q 046637 114 IIFV 117 (301)
Q Consensus 114 ~vi~ 117 (301)
.++-
T Consensus 215 ~~~~ 218 (348)
T 2d8a_A 215 YVIN 218 (348)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6654
No 212
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=30.73 E-value=59 Score=18.45 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=14.7
Q ss_pred HHhcCCCCCCEEEEEcCCC
Q 046637 56 LAHLGISPGDVVAALAPNV 74 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n~ 74 (301)
..++|+++||.|.+...++
T Consensus 21 r~~lgi~~Gd~v~i~~~~~ 39 (53)
T 2l66_A 21 RQKFQIKEGDLVKVTFDES 39 (53)
T ss_dssp HHHSCCCTTCEEEEEECSS
T ss_pred HHHcCcCCCCEEEEEEECC
Confidence 4567999999998876553
No 213
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=30.69 E-value=2.4e+02 Score=23.65 Aligned_cols=56 Identities=9% Similarity=0.211 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCCHHHHHHHH-HhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHF-GVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~l-A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-....-.+- .+...|+.++.++.. ..+++...++. +.++|+++
T Consensus 102 ~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-d~~~l~~~i~~-~t~~v~~~ 158 (403)
T 3cog_A 102 LKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-KIKLLEAAITP-ETKLVWIE 158 (403)
T ss_dssp SCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-SHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCc-CCeEEEEE
Confidence 5678877777766554333221 234567666666544 56666666643 56666654
No 214
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=30.61 E-value=2.2e+02 Score=24.04 Aligned_cols=57 Identities=9% Similarity=0.065 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHH-hhhccceeeec-CCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFG-VPMAGAVLCTL-NTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+..+........+.. +...|+.++.+ +.. ..+++...++. +.++|+++.
T Consensus 94 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-d~~~l~~~i~~-~~~~v~~~~ 152 (421)
T 2ctz_A 94 AQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-RPEEFLALTDE-KTRAWWVES 152 (421)
T ss_dssp CCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-CHHHHHHHCCT-TEEEEEEES
T ss_pred hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-CHHHHHHhhcc-CCeEEEEEC
Confidence 56888887776665544433321 34567777766 544 67777777754 667777653
No 215
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=30.51 E-value=1.2e+02 Score=25.02 Aligned_cols=57 Identities=16% Similarity=0.017 Sum_probs=30.2
Q ss_pred CCCC-EEEEEcCCCHHHHHHHHHhhhccceeeec--CCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 62 SPGD-VVAALAPNVPAMYELHFGVPMAGAVLCTL--NTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 62 ~~g~-~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
++|| .|.+..+..+.+......+...|+.++.+ ++. ...+++...++. ++++++...
T Consensus 106 ~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 167 (400)
T 3vax_A 106 RTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP-DTLLVSLMH 167 (400)
T ss_dssp HHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT-TEEEEECCS
T ss_pred cCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC-CceEEEEEC
Confidence 4677 77776655555444443333456544444 332 245666666543 456666543
No 216
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=30.51 E-value=1.6e+02 Score=21.57 Aligned_cols=74 Identities=19% Similarity=0.158 Sum_probs=38.4
Q ss_pred eeeHHHHHHHHHHHHH---HHHh-cCCCCCCEEEEEcCCCH-HHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 39 QYTWKETHQRCVKLAS---GLAH-LGISPGDVVAALAPNVP-AMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 39 ~~Ty~el~~~~~~la~---~L~~-~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
.+++.|.......++. .|.+ .++++|++|.|.+..+. -..++.++ ...|+.++.+.. +.+.+. .++..+.+
T Consensus 10 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~--~~~~~~-~~~~~g~~ 85 (198)
T 1pqw_A 10 TLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAG--SDAKRE-MLSRLGVE 85 (198)
T ss_dssp ----CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEES--SHHHHH-HHHTTCCS
T ss_pred CCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeC--CHHHHH-HHHHcCCC
Confidence 4555554433222222 2433 48999999999996554 44444444 456776666643 334333 34455655
Q ss_pred EEE
Q 046637 114 IIF 116 (301)
Q Consensus 114 ~vi 116 (301)
.++
T Consensus 86 ~~~ 88 (198)
T 1pqw_A 86 YVG 88 (198)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 217
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=30.38 E-value=86 Score=25.15 Aligned_cols=76 Identities=14% Similarity=0.010 Sum_probs=42.9
Q ss_pred eeeHHHHHHHHHHHHH---HHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 39 QYTWKETHQRCVKLAS---GLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 39 ~~Ty~el~~~~~~la~---~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
.+++.+.......++. .|.+.++++|++|+|.+..+.--..+.-.+...|+.++.+..+ .+.+ ..++..+++.+
T Consensus 98 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~--~~~~-~~~~~~ga~~~ 174 (302)
T 1iz0_A 98 GLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR--PEKL-ALPLALGAEEA 174 (302)
T ss_dssp TCCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESS--GGGS-HHHHHTTCSEE
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC--HHHH-HHHHhcCCCEE
Confidence 5788775433333332 3443459999999999986554433444444568766665443 2222 23345666665
Q ss_pred EE
Q 046637 116 FV 117 (301)
Q Consensus 116 i~ 117 (301)
+-
T Consensus 175 ~~ 176 (302)
T 1iz0_A 175 AT 176 (302)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 218
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=30.34 E-value=2.3e+02 Score=23.47 Aligned_cols=56 Identities=13% Similarity=0.257 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHH-hhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFG-VPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+-. +...|+.++.++.. ..+++...++. ++++|+..
T Consensus 100 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~~~~v~~~ 156 (398)
T 2rfv_A 100 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-KPEEIRAAMRP-ETKVVYIE 156 (398)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-SHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHhcCC-CCeEEEEE
Confidence 46788888877766554433311 24567666666543 56777776653 56666654
No 219
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=30.05 E-value=2.4e+02 Score=23.52 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC-----CCCHHHHHHHHHhc---Cce-EEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT-----RHDSAMVSVLLRHS---EAK-IIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~---~~~-~vi~~ 118 (301)
+++||.|.+..|.-..+.. ++...|+.++.++. ....+++...++.. +.+ ++++.
T Consensus 123 ~~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~ 186 (418)
T 3rq1_A 123 TEPGDEVLTADWYWGAYRV---ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFN 186 (418)
T ss_dssp SCTTCEEEEESSCCTHHHH---HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred cCCCCEEEECCCCchhHHH---HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEe
Confidence 4689999888876555443 34556765555442 44678888888753 444 45443
No 220
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=29.94 E-value=1.8e+02 Score=24.10 Aligned_cols=77 Identities=9% Similarity=0.008 Sum_probs=44.3
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......+.. .+ ...++++|++|+|.+...+-..++.+|- ..|+ .++.+... ++.+ .+++..++
T Consensus 163 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~--~~~~-~~~~~lGa 238 (374)
T 1cdo_A 163 PSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCH-SAGAKRIIAVDLN--PDKF-EKAKVFGA 238 (374)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--GGGH-HHHHHTTC
T ss_pred CCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCC--HHHH-HHHHHhCC
Confidence 45787775443222222 23 3458999999999996444555555554 5687 56555433 2222 34456777
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++..
T Consensus 239 ~~vi~~ 244 (374)
T 1cdo_A 239 TDFVNP 244 (374)
T ss_dssp CEEECG
T ss_pred ceEEec
Confidence 766643
No 221
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=29.86 E-value=1.9e+02 Score=23.73 Aligned_cols=69 Identities=17% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC----CCHHHHHHHHHhcCceEEEEcC
Q 046637 49 CVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR----HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 49 ~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
...+...+... +++||.|.+..+.-... ...-++...|+.++.++.. ...+++...++..++++|+...
T Consensus 95 t~al~~~~~~~-~~~gd~Vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 167 (393)
T 1vjo_A 95 TAAMEATIANA-VEPGDVVLIGVAGYFGN-RLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVH 167 (393)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHhc-cCCCCEEEEEcCChhHH-HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEec
No 222
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=29.81 E-value=1.2e+02 Score=25.20 Aligned_cols=55 Identities=11% Similarity=-0.136 Sum_probs=36.4
Q ss_pred EEcCCCHHHHHHHHHhhhccceeeecCCCC-CHHHHHHHHHhcCceEEEEcCCchh
Q 046637 69 ALAPNVPAMYELHFGVPMAGAVLCTLNTRH-DSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 69 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
+....+=.-..+.++|...|..++.+-|.. .+..-...++..++++++++....+
T Consensus 83 v~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~~ 138 (352)
T 2zsj_A 83 ICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGTFDD 138 (352)
T ss_dssp EECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSCHHH
T ss_pred EEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 333444444545577788898666555543 4456667889999999999875433
No 223
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=29.79 E-value=54 Score=27.10 Aligned_cols=62 Identities=19% Similarity=0.145 Sum_probs=36.3
Q ss_pred HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 046637 53 ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-----HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 53 a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 118 (301)
...+...++++||.|.+..+....... ++...|+.++.++.. ...+++...++. ++++|+..
T Consensus 65 ~~~l~~l~~~~gd~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 131 (373)
T 3frk_A 65 HLILKGYDIGFGDEVIVPSNTFIATAL---AVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAV 131 (373)
T ss_dssp HHHHHHTTCCTTCEEEEETTSCTHHHH---HHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEEE
T ss_pred HHHHHHcCCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEEE
Confidence 334555577889988887776655433 345567655544322 145666666644 56666654
No 224
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=29.47 E-value=1.1e+02 Score=21.59 Aligned_cols=26 Identities=12% Similarity=-0.082 Sum_probs=13.7
Q ss_pred CCCCCCHHHHHHHHhhhcCCccEEEECC
Q 046637 10 NYVPLTPISFLERSAVVYRDRPSVVYGD 37 (301)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~al~~~~ 37 (301)
++..|+.. .++... +.|.+++++-.+
T Consensus 6 ~~~~m~~~-~l~~ll-~~p~~iaVVGas 31 (144)
T 2d59_A 6 PIDGLTDE-DIREIL-TRYKKIALVGAS 31 (144)
T ss_dssp CSSCCCHH-HHHHHH-HHCCEEEEETCC
T ss_pred ccCCCCHH-HHHHHH-cCCCEEEEEccC
Confidence 55556532 223222 347788888643
No 225
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=29.41 E-value=2e+02 Score=23.62 Aligned_cols=14 Identities=7% Similarity=-0.194 Sum_probs=8.6
Q ss_pred eeeechHHHHHHHH
Q 046637 200 GVICSHRGAYLNSL 213 (301)
Q Consensus 200 ~v~~s~~~l~~~~~ 213 (301)
|.++..+.+...+.
T Consensus 215 G~~~~~~~~~~~~~ 228 (393)
T 2huf_A 215 TPVSFSHRAVERYK 228 (393)
T ss_dssp EEEEECHHHHHHHH
T ss_pred EEEEECHHHHHHHh
Confidence 67777776655443
No 226
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=29.32 E-value=2.2e+02 Score=24.09 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHh------hhccceeeecCCCCCHHHHHHHHHhcCc---e
Q 046637 43 KETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGV------PMAGAVLCTLNTRHDSAMVSVLLRHSEA---K 113 (301)
Q Consensus 43 ~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~------~~~G~~~v~l~~~~~~~~l~~~l~~~~~---~ 113 (301)
+++...+..+-..|++.|++ ++|+..|..+.+...+.- -..|...+.....-.++-+.++++..+. .
T Consensus 255 g~~ypgv~e~L~~Lk~~Gi~----laI~Snn~~~~v~~~l~~~~~~~l~l~~~~~v~~~~KPKp~~l~~al~~Lgl~pee 330 (387)
T 3nvb_A 255 GKAFTEFQEWVKKLKNRGII----IAVCSKNNEGKAKEPFERNPEMVLKLDDIAVFVANWENKADNIRTIQRTLNIGFDS 330 (387)
T ss_dssp HHHHHHHHHHHHHHHHTTCE----EEEEEESCHHHHHHHHHHCTTCSSCGGGCSEEEEESSCHHHHHHHHHHHHTCCGGG
T ss_pred cccCHHHHHHHHHHHHCCCE----EEEEcCCCHHHHHHHHhhccccccCccCccEEEeCCCCcHHHHHHHHHHhCcCccc
Confidence 46677777888888887765 999999998888777753 2345555555555556777788877664 5
Q ss_pred EEEEcCCchhh
Q 046637 114 IIFVDYQLLPI 124 (301)
Q Consensus 114 ~vi~~~~~~~~ 124 (301)
++++.+...+.
T Consensus 331 ~v~VGDs~~Di 341 (387)
T 3nvb_A 331 MVFLDDNPFER 341 (387)
T ss_dssp EEEECSCHHHH
T ss_pred EEEECCCHHHH
Confidence 67777666544
No 227
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=29.07 E-value=1.7e+02 Score=21.34 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=35.1
Q ss_pred HHHHHHhcCC-CCCCEEEEEcCCCHHHHHHH--HHhhhccceeeecCCCCCH---HHHHHHHHhcCceEEEEcCC
Q 046637 52 LASGLAHLGI-SPGDVVAALAPNVPAMYELH--FGVPMAGAVLCTLNTRHDS---AMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 52 la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~--lA~~~~G~~~v~l~~~~~~---~~l~~~l~~~~~~~vi~~~~ 120 (301)
++-.|.+.+- +.+..|..+.|...-+.-.+ +++-.. -++.+++.... ..+++.++.-.+.+|++.-.
T Consensus 62 L~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~--rll~v~~~~~~daLwa~EqALrsG~~~aVl~Wl~ 134 (161)
T 1oft_A 62 LAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRE--RILLLQAKDNAAALALSCEALRLGRSHTVVSWLE 134 (161)
T ss_dssp HHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGG--GEEEECCSSTTHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHH--HEEEEECCChHHHHHHHHHHHhcCCccEEEECCC
Confidence 3444444432 23457888877653322222 222222 34555555444 44667777778888888643
No 228
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=29.02 E-value=81 Score=24.86 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=30.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCH-HHHHHHHHhhhccce
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNVP-AMYELHFGVPMAGAV 90 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~ 90 (301)
..++..+.++|+.+++.|.+++..+. ....+.+.+...|..
T Consensus 67 ~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~ 108 (271)
T 1e0c_A 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQ 108 (271)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcCCC
Confidence 46677777888888889999888765 555666667777863
No 229
>3e19_A FEOA; transcriptional regulator, metal-binding, iron uptake, beta- transcription regulator, metal binding protein; HET: GOL; 2.00A {Thermococcus thioreducens}
Probab=28.92 E-value=58 Score=20.04 Aligned_cols=23 Identities=22% Similarity=0.508 Sum_probs=19.0
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcC
Q 046637 50 VKLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~ 72 (301)
..+.+.|.++|+.+|..|-+.-.
T Consensus 25 ~~~~~rL~~lGi~~G~~v~v~~~ 47 (77)
T 3e19_A 25 HNARQKLVSMGLTPGATIQVLES 47 (77)
T ss_dssp HHHHHHHHTTTCSTTCEEEEEEC
T ss_pred HHHHHHHHHCCCCCCCEEEEEEe
Confidence 36778899999999999988743
No 230
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=28.89 E-value=2.2e+02 Score=22.61 Aligned_cols=56 Identities=11% Similarity=0.123 Sum_probs=43.1
Q ss_pred HHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH
Q 046637 18 SFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM 77 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~ 77 (301)
..++...+.-|+...+.+.+ ..-+|.++.+.+...+..|.+.|++ ..++.-|....
T Consensus 21 tv~~~i~~~lp~~~~iy~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~----~iVIACNTa~~ 82 (268)
T 3out_A 21 TIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVK----AIIIACNTISA 82 (268)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHHCCCCcEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCChHH
Confidence 45666667788877776654 3689999999999999999988765 67777776654
No 231
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=28.80 E-value=1e+02 Score=21.27 Aligned_cols=53 Identities=4% Similarity=-0.034 Sum_probs=37.3
Q ss_pred eeeeHHHHHHHH----HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 38 VQYTWKETHQRC----VKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 38 ~~~Ty~el~~~~----~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
..+.+.++.... ..+...+...++.+++.|.+++..+.....+...+...|..
T Consensus 61 inip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~ 117 (139)
T 3d1p_A 61 INVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYS 117 (139)
T ss_dssp EECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSSSHHHHHHHHHHHTTTCC
T ss_pred EEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCCCchHHHHHHHHHHcCCC
Confidence 356666664332 24444555567888899999999998888888888888874
No 232
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=28.79 E-value=2.5e+02 Score=23.22 Aligned_cols=23 Identities=9% Similarity=-0.143 Sum_probs=16.3
Q ss_pred CCCCCCCeeeechHHHHHHHHHH
Q 046637 193 GTTSSPKGVICSHRGAYLNSLAA 215 (301)
Q Consensus 193 GtTG~pK~v~~s~~~l~~~~~~~ 215 (301)
|..|.+-|.++....++......
T Consensus 243 g~~G~r~G~~~~~~~~~~~~~~~ 265 (410)
T 3e2y_A 243 SVTGWKLGWSIGPAHLIKHLQTV 265 (410)
T ss_dssp SCGGGCCEEEECCHHHHHHHHHH
T ss_pred CCCCceEEEEEECHHHHHHHHHH
Confidence 34677789999888877665543
No 233
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=28.77 E-value=76 Score=25.24 Aligned_cols=41 Identities=15% Similarity=0.115 Sum_probs=33.1
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhh-hccce
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVP-MAGAV 90 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~-~~G~~ 90 (301)
..+...+.+.|+.+++.|.+++..+.....+.+.+. ..|..
T Consensus 219 ~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~ 260 (285)
T 1uar_A 219 EELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYP 260 (285)
T ss_dssp HHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCCC
Confidence 455566777899999999999999888887888887 78873
No 234
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=28.71 E-value=1.1e+02 Score=21.64 Aligned_cols=10 Identities=10% Similarity=-0.077 Sum_probs=6.6
Q ss_pred cCCccEEEEC
Q 046637 27 YRDRPSVVYG 36 (301)
Q Consensus 27 ~~~~~al~~~ 36 (301)
.|.+++++-.
T Consensus 12 ~p~~IavIGa 21 (145)
T 2duw_A 12 STRTIALVGA 21 (145)
T ss_dssp HCCCEEEESC
T ss_pred CCCEEEEECc
Confidence 3677777754
No 235
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=28.38 E-value=1.3e+02 Score=25.08 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=35.4
Q ss_pred CCCCEEEEEcCCCH-HHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 62 SPGDVVAALAPNVP-AMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 62 ~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
++|++|+|.+..+. -..++.+| ...|+.++.+. +++.+ .+++..+++.++-..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla-~~~Ga~Vi~~~---~~~~~-~~~~~lGa~~vi~~~ 216 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQML-RLSGYIPIATC---SPHNF-DLAKSRGAEEVFDYR 216 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEE---CGGGH-HHHHHTTCSEEEETT
T ss_pred CCCcEEEEECCCcHHHHHHHHHH-HHCCCEEEEEe---CHHHH-HHHHHcCCcEEEECC
Confidence 89999999999664 45544454 46788666552 33343 467788888777543
No 236
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=28.27 E-value=2.5e+02 Score=23.04 Aligned_cols=20 Identities=10% Similarity=-0.019 Sum_probs=13.2
Q ss_pred CCCCCeeeechHHHHHHHHH
Q 046637 195 TSSPKGVICSHRGAYLNSLA 214 (301)
Q Consensus 195 TG~pK~v~~s~~~l~~~~~~ 214 (301)
.|.+-|.++..+.+......
T Consensus 238 ~G~r~G~~~~~~~~~~~l~~ 257 (389)
T 1gd9_A 238 TGWRLGFVAAPSWIIERMVK 257 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHH
T ss_pred cccceEEEEECHHHHHHHHH
Confidence 34556888888877665544
No 237
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=28.24 E-value=1.7e+02 Score=23.91 Aligned_cols=60 Identities=10% Similarity=0.026 Sum_probs=37.3
Q ss_pred CCCCCCEEEEEcCCCH---HHHHHHH-HhhhccceeeecCC---------CC---CHHHHHHHHHhcCceEEEEcC
Q 046637 60 GISPGDVVAALAPNVP---AMYELHF-GVPMAGAVLCTLNT---------RH---DSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~---~~~~~~l-A~~~~G~~~v~l~~---------~~---~~~~l~~~l~~~~~~~vi~~~ 119 (301)
-+++||+|+|++|++. +.+-... -+-..|..++.-.. .. ..++|...+.+-++++|++..
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~r 88 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLR 88 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEcc
Confidence 4789999999999874 2111111 12235766654321 11 235677888888999999974
No 238
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=28.10 E-value=1.5e+02 Score=20.32 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=15.2
Q ss_pred HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhcc
Q 046637 54 SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAG 88 (301)
Q Consensus 54 ~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 88 (301)
.+|.+.|+.++..+.+-..+..+.+-++-=+++.|
T Consensus 48 ~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg 82 (119)
T 1ofu_X 48 EWLRRAGLNRERILLLQAKDNAAALALSCEALRLG 82 (119)
T ss_dssp HHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcC
Confidence 34444555544433333333334444444444444
No 239
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=28.10 E-value=2.8e+02 Score=23.60 Aligned_cols=53 Identities=17% Similarity=0.384 Sum_probs=29.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeec--CCC-CCHHHHHHHHH----h-cCceEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTL--NTR-HDSAMVSVLLR----H-SEAKIIF 116 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~-~~~~~l~~~l~----~-~~~~~vi 116 (301)
+++||.|++..+.-..+.. ++...|+.++.+ ++. ...+++...++ . .++++|+
T Consensus 161 ~~~Gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~ 221 (448)
T 3aow_A 161 LNPGDIVVVEAPTYLAALQ---AFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVY 221 (448)
T ss_dssp CCTTCEEEEEESCCHHHHH---HHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEEeCCChHHHHH---HHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEE
Confidence 3567777776665444332 233455544433 322 45677777776 3 2667764
No 240
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=28.02 E-value=79 Score=25.09 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCHH-HHHHHHHhhhccc
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNVPA-MYELHFGVPMAGA 89 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~ 89 (301)
..+...+.++|+.+++.|.+++..+.. ...+.+.+...|.
T Consensus 72 ~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~ 112 (280)
T 1urh_A 72 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGV 112 (280)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCC
Confidence 456666777888888888888887654 5556666677776
No 241
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=27.57 E-value=1.1e+02 Score=25.43 Aligned_cols=17 Identities=6% Similarity=0.237 Sum_probs=9.8
Q ss_pred CHHHHHHHHHhcCccee
Q 046637 259 NAKEIFDNITRHKVTHF 275 (301)
Q Consensus 259 ~~~~~~~~i~~~~~t~~ 275 (301)
+...+.+.+.+.++-+.
T Consensus 346 ~~~~~~~~L~~~gi~v~ 362 (406)
T 3cai_A 346 PADRVVQRLADNGILAI 362 (406)
T ss_dssp CHHHHHHHHHHTTEECE
T ss_pred CHHHHHHHHHHCCcEEe
Confidence 45566666666655443
No 242
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=27.54 E-value=2.6e+02 Score=23.02 Aligned_cols=54 Identities=22% Similarity=0.276 Sum_probs=31.8
Q ss_pred CCCC-CEEEEEcCCCHHHHHHHHHhhhccceeeec--CC---CCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPG-DVVAALAPNVPAMYELHFGVPMAGAVLCTL--NT---RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g-~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~---~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++| |.|.+..+.-..+.. ++...|+.++.+ ++ ....+++...++. ++++++..
T Consensus 120 ~~~g~d~vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 179 (398)
T 3ele_A 120 TSDAYDEFITIAPYFPEYKV---FVNAAGARLVEVPADTEHFQIDFDALEERINA-HTRGVIIN 179 (398)
T ss_dssp CCSTTCEEEEESSCCTHHHH---HHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT-TEEEEEEC
T ss_pred cCCCCCEEEEeCCCchhhHH---HHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc-CCCEEEEc
Confidence 4678 888887776554432 333456554444 33 2366777777653 56666663
No 243
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=27.45 E-value=2.3e+02 Score=22.36 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=42.6
Q ss_pred HHHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH
Q 046637 17 ISFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM 77 (301)
Q Consensus 17 ~~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~ 77 (301)
.+++++..+..|+...+.+.| ...++.++.+++...+..|.+.|++ ..++.-|+...
T Consensus 16 ltv~~~i~~~lP~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d----~iviaCNTas~ 78 (267)
T 2gzm_A 16 LTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHLLDLNIK----MLVIACNTATA 78 (267)
T ss_dssp HHHHHHHHHHCTTSCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCchhhH
Confidence 456677777889887777644 2568999999999999999887654 66666676653
No 244
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=27.38 E-value=1.3e+02 Score=23.35 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHh-hhccceeeecCCCCCHHHHHHHHH
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNVPAMYELHFGV-PMAGAVLCTLNTRHDSAMVSVLLR 108 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~-~~~G~~~v~l~~~~~~~~l~~~l~ 108 (301)
..+..+|.+++++||++|+-++.-+=- .+..+|= .--...+..++ .+++.+..+.+
T Consensus 64 a~i~~gl~~l~ikpG~~VldlG~G~G~-~~~~la~~VG~~G~V~avD--~s~~~~~~l~~ 120 (233)
T 4df3_A 64 AALLKGLIELPVKEGDRILYLGIASGT-TASHMSDIIGPRGRIYGVE--FAPRVMRDLLT 120 (233)
T ss_dssp HHHHTTCSCCCCCTTCEEEEETCTTSH-HHHHHHHHHCTTCEEEEEE--CCHHHHHHHHH
T ss_pred HHHHhchhhcCCCCCCEEEEecCcCCH-HHHHHHHHhCCCceEEEEe--CCHHHHHHHHH
Confidence 334445566799999999988775433 3333332 22223444443 34444444443
No 245
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=27.36 E-value=2.5e+02 Score=22.96 Aligned_cols=53 Identities=25% Similarity=0.264 Sum_probs=28.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC------CCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR------HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++||.|.+..+....+.. ++...|+.++.++.. ...+++...++. ++++|+.
T Consensus 111 ~~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 169 (388)
T 1j32_A 111 IEPGDEVIIPAPFWVSYPE---MVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF 169 (388)
T ss_dssp CCTTCEEEEESSCCTHHHH---HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred cCCCCEEEEcCCCChhHHH---HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-CceEEEE
Confidence 4567777777665544332 233455544443321 356677766643 4555554
No 246
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=27.35 E-value=1.9e+02 Score=24.07 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=38.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+-.+...... -++...|+.+++++. ...+++...++..++++|+++.
T Consensus 140 ~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFAHMSLW---EGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTSCHHHH---HHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCcCHHHH---HHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 568998888766655433 345566877777643 5688899999876677777764
No 247
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=27.15 E-value=2.5e+02 Score=22.78 Aligned_cols=58 Identities=14% Similarity=-0.016 Sum_probs=36.0
Q ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEE
Q 046637 58 HLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 58 ~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (301)
..++++|++|+|.+..+.--..+.-.+...|+.++.+.. +.+.+....+..+++.++-
T Consensus 150 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~--~~~~~~~~~~~~g~~~~~d 207 (345)
T 2j3h_A 150 VCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG--SKEKVDLLKTKFGFDDAFN 207 (345)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES--SHHHHHHHHHTSCCSEEEE
T ss_pred HhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHHcCCceEEe
Confidence 348999999999998655444344444466876665543 3455544443667766553
No 248
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=26.81 E-value=2.6e+02 Score=22.80 Aligned_cols=75 Identities=9% Similarity=-0.055 Sum_probs=42.9
Q ss_pred eeeHHHHHHHHHHH---HHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 39 QYTWKETHQRCVKL---ASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 39 ~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
.+++.+........ -+.|...++++|++|+|.+..+.--..+...+...|+.++.+..+.. .+ ..++..+++.+
T Consensus 142 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~--~~-~~~~~~g~~~~ 218 (347)
T 2hcy_A 142 GTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEG--KE-ELFRSIGGEVF 218 (347)
T ss_dssp TCCHHHHGGGGTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTT--HH-HHHHHTTCCEE
T ss_pred CCCHHHHHHHhhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHH--HH-HHHHHcCCceE
Confidence 57777643222111 23455568999999999999654433333444456876666654322 22 33445566655
Q ss_pred E
Q 046637 116 F 116 (301)
Q Consensus 116 i 116 (301)
+
T Consensus 219 ~ 219 (347)
T 2hcy_A 219 I 219 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 249
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=26.67 E-value=1.9e+02 Score=23.92 Aligned_cols=53 Identities=13% Similarity=0.060 Sum_probs=33.7
Q ss_pred CCCCCEEEEEcCCCH-HHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVP-AMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++|++|+|.+..+. -..++.+|- ..|+.++... +.+.+ ..++..+++.++-.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~-~~Ga~Vi~~~---~~~~~-~~~~~lGa~~v~~~ 234 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMK-AWDAHVTAVC---SQDAS-ELVRKLGADDVIDY 234 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEE---CGGGH-HHHHHTTCSEEEET
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEe---ChHHH-HHHHHcCCCEEEEC
Confidence 899999999996554 455555554 5677655553 22333 34577788776653
No 250
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=26.61 E-value=2.2e+02 Score=23.59 Aligned_cols=77 Identities=8% Similarity=-0.020 Sum_probs=44.4
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......++. .+ ...++++|++|+|.+...+-..++.+|- ..|+ .++.+... ++. ..+++..++
T Consensus 162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~--~~~-~~~~~~lGa 237 (374)
T 2jhf_A 162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK-AAGAARIIGVDIN--KDK-FAKAKEVGA 237 (374)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--GGG-HHHHHHTTC
T ss_pred CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCC--HHH-HHHHHHhCC
Confidence 35777765443222222 23 3458999999999996444555555554 5677 56555433 222 234456777
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++-.
T Consensus 238 ~~vi~~ 243 (374)
T 2jhf_A 238 TECVNP 243 (374)
T ss_dssp SEEECG
T ss_pred ceEecc
Confidence 766643
No 251
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.49 E-value=1.7e+02 Score=21.10 Aligned_cols=72 Identities=10% Similarity=-0.002 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeccc-hhhhhhHHHHHHHHhCCeEEee--CCCCHHHHHHHHHhcCcceecCC
Q 046637 207 GAYLNSLAAALFNEMGLMPTYLWCVPM-FHCNGWCLTWAVAAQGGTNVCQ--RTVNAKEIFDNITRHKVTHFGGA 278 (301)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~l~~~p~-~h~~g~~~~~~~l~~g~~~v~~--~~~~~~~~~~~i~~~~~t~~~~~ 278 (301)
+.+..+........-....+++.+.+- .|..|...+-..+-..|--|+. ....++++.+.+.+++++.+.++
T Consensus 2 ~~l~~l~~~~~~~~~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS 76 (161)
T 2yxb_A 2 SSLQSTRERVLGTPRRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVS 76 (161)
T ss_dssp --------------CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEE
T ss_pred ccHHHHHHHHHhhcCCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEE
No 252
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=26.49 E-value=2.1e+02 Score=26.62 Aligned_cols=56 Identities=7% Similarity=0.087 Sum_probs=39.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCC--------------CHHHHHHHHHhc-Cce----EEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRH--------------DSAMVSVLLRHS-EAK----IIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~--------------~~~~l~~~l~~~-~~~----~vi~~~ 119 (301)
+++||.|.+--++..... -++...|+.++.+++.. ..+.++..++.. +.+ +++++.
T Consensus 232 ~~pGD~VLv~r~~H~S~~---~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p 306 (715)
T 3n75_A 232 APAGSTILIDRNCHKSLT---HLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS 306 (715)
T ss_dssp CCTTCEEEEESSCCHHHH---HHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS
T ss_pred CCCCCEEEECCCccHHHH---HHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC
Confidence 689999988877665544 36778899888877531 578899988763 333 556554
No 253
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=26.44 E-value=1.9e+02 Score=23.94 Aligned_cols=77 Identities=10% Similarity=0.019 Sum_probs=44.0
Q ss_pred eeeeHHHHHHHHHHHHH---HH-HhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCc
Q 046637 38 VQYTWKETHQRCVKLAS---GL-AHLGISPGDVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEA 112 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~---~L-~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~ 112 (301)
..+++.+.......++. .+ ...++++|++|+|.+...+-..++.+|- ..|+ .++.+... ++. ..+++..++
T Consensus 161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~-~~Ga~~Vi~~~~~--~~~-~~~~~~lGa 236 (373)
T 2fzw_A 161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCK-VAGASRIIGVDIN--KDK-FARAKEFGA 236 (373)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECSC--GGG-HHHHHHHTC
T ss_pred CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCC--HHH-HHHHHHcCC
Confidence 35777775433222222 23 3458999999999997445555555554 4677 56565433 222 233455677
Q ss_pred eEEEEc
Q 046637 113 KIIFVD 118 (301)
Q Consensus 113 ~~vi~~ 118 (301)
+.++-.
T Consensus 237 ~~vi~~ 242 (373)
T 2fzw_A 237 TECINP 242 (373)
T ss_dssp SEEECG
T ss_pred ceEecc
Confidence 766543
No 254
>1zjc_A Aminopeptidase AMPS; metallopeptidase, hydrolase; 1.80A {Staphylococcus aureus subsp} SCOP: e.60.1.1
Probab=26.42 E-value=99 Score=26.58 Aligned_cols=49 Identities=12% Similarity=0.021 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhc--CCCCCCEEEEEcCCC-HHH-HHHHHHhhhccceeee
Q 046637 45 THQRCVKLASGLAHL--GISPGDVVAALAPNV-PAM-YELHFGVPMAGAVLCT 93 (301)
Q Consensus 45 l~~~~~~la~~L~~~--gv~~g~~V~i~~~n~-~~~-~~~~lA~~~~G~~~v~ 93 (301)
+..+..++|..+.+. ++++|+.|.|..+-. .++ -.+.-++...|+.++.
T Consensus 7 ~~~~l~k~A~~lV~~~~~lq~Ge~VlI~~~~~~~~l~r~l~~~a~~~Ga~~v~ 59 (418)
T 1zjc_A 7 YKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVR 59 (418)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTTCCEEEEEETTCHHHHHHHHHHHHHTTCCSEE
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEE
Confidence 456777788888765 689999999987753 333 4556677888987665
No 255
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=26.36 E-value=95 Score=24.43 Aligned_cols=52 Identities=15% Similarity=0.234 Sum_probs=38.1
Q ss_pred eeeHHHHHHHH------HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 39 QYTWKETHQRC------VKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 39 ~~Ty~el~~~~------~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.+.+.++.... ..+...+.+.|+.+++.|.+++..+.....+.+++...|..
T Consensus 192 ~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~ 249 (271)
T 1e0c_A 192 NFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYP 249 (271)
T ss_dssp ECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred eccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCCC
Confidence 45666654221 33445566778999999999999998888888888888974
No 256
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=26.13 E-value=2.7e+02 Score=22.69 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhcccee--eecCCCC--CHHHHHHHHHhcCceEEEE
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVL--CTLNTRH--DSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~--v~l~~~~--~~~~l~~~l~~~~~~~vi~ 117 (301)
++||.|.+..+....+.- ++...|+.+ +++++.. ..+++...++..++++++.
T Consensus 121 ~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~ 177 (397)
T 3f9t_A 121 NEHPKIIVPITAHFSFEK---GREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIG 177 (397)
T ss_dssp CSSCEEEEETTCCTHHHH---HHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEE
T ss_pred CCCeEEEECCcchhHHHH---HHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEE
Confidence 457777776665544322 222335433 4443333 6677777777645554443
No 257
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=26.07 E-value=1.3e+02 Score=21.05 Aligned_cols=48 Identities=15% Similarity=0.133 Sum_probs=22.1
Q ss_pred CEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCce
Q 046637 65 DVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAK 113 (301)
Q Consensus 65 ~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (301)
|.|.++.| .....-.+..|...|.-.+.+.+..-.+++....+..+..
T Consensus 71 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE
Confidence 44444444 2333333334444554444444444445555555555544
No 258
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=26.02 E-value=1.8e+02 Score=23.67 Aligned_cols=74 Identities=14% Similarity=0.066 Sum_probs=41.6
Q ss_pred eeeHHH--HHHHHHHHHH---HHH-hcCCCCCCEEEEEcCC-CHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcC
Q 046637 39 QYTWKE--THQRCVKLAS---GLA-HLGISPGDVVAALAPN-VPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSE 111 (301)
Q Consensus 39 ~~Ty~e--l~~~~~~la~---~L~-~~gv~~g~~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (301)
.+++.+ .......++. .|. ..++++|++|.|.+.. .+-..++.++. ..|+.++.+..+ .+.+.. ++..+
T Consensus 115 ~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~-~~G~~Vi~~~~~--~~~~~~-~~~~g 190 (333)
T 1wly_A 115 DLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWAR-HLGATVIGTVST--EEKAET-ARKLG 190 (333)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHH-HTTCEEEEEESS--HHHHHH-HHHHT
T ss_pred CCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCC--HHHHHH-HHHcC
Confidence 466666 3333333322 343 3479999999999974 45555555444 568766666443 344433 34456
Q ss_pred ceEEE
Q 046637 112 AKIIF 116 (301)
Q Consensus 112 ~~~vi 116 (301)
++.++
T Consensus 191 ~~~~~ 195 (333)
T 1wly_A 191 CHHTI 195 (333)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 66554
No 259
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=26.01 E-value=1.6e+02 Score=23.60 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC--CCCHH---HHHHHHHhcCceE
Q 046637 42 WKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT--RHDSA---MVSVLLRHSEAKI 114 (301)
Q Consensus 42 y~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~~~~~---~l~~~l~~~~~~~ 114 (301)
++++.++.+.+-..+++. .+ ++.. .+...+...++.--+++-..|.. .+++ .-++. ++...++..+.++
T Consensus 151 ~~~~~~~L~~Ld~~~~~~l~~~-~~~~-~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 226 (284)
T 2prs_A 151 LKDFEAQLASTETQVGNELAPL-KGKG-YFVFHDAYGYFEKQFGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATC 226 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGG-TTCC-EEEEESCCHHHHHHHTCCCCEEE--ESSTTSCCCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCe-EEEECccHHHHHHHCCCeEeEee--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 444445554444444432 22 2433 45556678888888888766533 3333 34554 4556667789999
Q ss_pred EEEcCCchhhHHHH
Q 046637 115 IFVDYQLLPIAQGA 128 (301)
Q Consensus 115 vi~~~~~~~~~~~~ 128 (301)
||++........+.
T Consensus 227 if~e~~~~~~~~~~ 240 (284)
T 2prs_A 227 VFAEPQFRPAVVES 240 (284)
T ss_dssp EEECTTSCSHHHHH
T ss_pred EEEeCCCChHHHHH
Confidence 99998765544433
No 260
>3mhx_A Putative ferrous iron transport protein A; FEOA, zinc binding, prokaryotic SH3 stenotrophomonus maltophilia, metal transport; 1.70A {Stenotrophomonas maltophilia}
Probab=25.89 E-value=71 Score=20.17 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=18.4
Q ss_pred HHHHHHHhcCCCCCCEEEEEcC
Q 046637 51 KLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~ 72 (301)
.+.+.|.++|+.+|..|-++..
T Consensus 26 ~~~~rL~~lGl~pG~~v~V~~~ 47 (85)
T 3mhx_A 26 AIARRLRELGFVKGEEVRMVAK 47 (85)
T ss_dssp HHHHHHHHTTCCTTCEEEEEES
T ss_pred HHHHHHHHCCCCCCCEEEEEEe
Confidence 5667899999999999988754
No 261
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=25.85 E-value=2.4e+02 Score=23.06 Aligned_cols=59 Identities=7% Similarity=-0.088 Sum_probs=37.1
Q ss_pred HhcCCCCC--CEEEEEcCCCHHHHHHHHHhhhccc-eeeecCCCCCHHHHHHHHHhcCceEEEE
Q 046637 57 AHLGISPG--DVVAALAPNVPAMYELHFGVPMAGA-VLCTLNTRHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 57 ~~~gv~~g--~~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 117 (301)
...++++| ++|+|.+..+.--..+...+...|+ .++.+.. +.+.+..+.+..+++.++-
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~--~~~~~~~~~~~~g~~~~~d 213 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG--THEKCILLTSELGFDAAIN 213 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHHTSCCSEEEE
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC--CHHHHHHHHHHcCCceEEe
Confidence 44589999 9999999866554444444456787 6655543 3455555544467765553
No 262
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=25.84 E-value=2.5e+02 Score=22.25 Aligned_cols=57 Identities=16% Similarity=0.077 Sum_probs=44.1
Q ss_pred HHHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEcCCCHHH
Q 046637 17 ISFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAH-LGISPGDVVAALAPNVPAM 77 (301)
Q Consensus 17 ~~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~ 77 (301)
.+++++..+..|+...+.+.| ...+..++.+++...+..|.+ .|++ ..++.-|+...
T Consensus 16 ltv~~~i~~~lP~~~~iy~~D~~~~PyG~~s~~~i~~~~~~~~~~L~~~~g~d----~iViACNTas~ 79 (272)
T 1zuw_A 16 LTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIK----MLVIACNTATA 79 (272)
T ss_dssp HHHHHHHHHHSTTCCEEEEECGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCCS----EEEECCHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEeccCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCC----EEEEeCchhhH
Confidence 466777788899888776655 357899999999999999998 7765 66667776653
No 263
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=25.78 E-value=2.8e+02 Score=22.80 Aligned_cols=53 Identities=28% Similarity=0.340 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCC----CCCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNT----RHDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~----~~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++||.|++..|.-..+.- ++...|+.++ ++++ ....+++...++. ++++++.
T Consensus 112 ~~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 170 (385)
T 1b5p_A 112 LDPGDEVIVLSPYWVSYPE---MVRFAGGVVVEVETLPEEGFVPDPERVRRAITP-RTKALVV 170 (385)
T ss_dssp CCTTCEEEEEESCCTHHHH---HHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT-TEEEEEE
T ss_pred cCCCCEEEEcCCCchhHHH---HHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC-CCEEEEE
Confidence 4577887777776544332 2334565444 4432 2355666666543 4555554
No 264
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=25.68 E-value=97 Score=26.49 Aligned_cols=52 Identities=21% Similarity=0.097 Sum_probs=40.7
Q ss_pred eeeHHHHHH-------HHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 39 QYTWKETHQ-------RCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 39 ~~Ty~el~~-------~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.+.+.++.. ..+.+...+.+.|+.+++.|.+++..+.....+.+++...|..
T Consensus 171 nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~~ 229 (423)
T 2wlr_A 171 YIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVK 229 (423)
T ss_dssp EEEGGGTEETTTTEECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTCS
T ss_pred EcCHHHhccCCCCCCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCCC
Confidence 566666643 2456677788889999999999999888888888888899974
No 265
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=25.47 E-value=1.9e+02 Score=23.38 Aligned_cols=75 Identities=19% Similarity=0.107 Sum_probs=42.0
Q ss_pred eeeHHHHHHHHHH---HH---HHHHhcCCCCCC-EEEEEcCCCHH-HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc
Q 046637 39 QYTWKETHQRCVK---LA---SGLAHLGISPGD-VVAALAPNVPA-MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS 110 (301)
Q Consensus 39 ~~Ty~el~~~~~~---la---~~L~~~gv~~g~-~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (301)
.+++.+....-.. .. +.+.+.++++|+ +|+|.+..+.- ..++.+| ...|+.++.+.... +.+ ..++..
T Consensus 118 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a-~~~Ga~vi~~~~~~--~~~-~~~~~l 193 (328)
T 1xa0_A 118 GLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSML-AKRGYTVEASTGKA--AEH-DYLRVL 193 (328)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHH-HHTTCCEEEEESCT--TCH-HHHHHT
T ss_pred CCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHH-HHCCCEEEEEECCH--HHH-HHHHHc
Confidence 5777765433211 11 223456899997 99999985554 4444444 45687665554432 222 233456
Q ss_pred CceEEEE
Q 046637 111 EAKIIFV 117 (301)
Q Consensus 111 ~~~~vi~ 117 (301)
+++.++-
T Consensus 194 Ga~~~i~ 200 (328)
T 1xa0_A 194 GAKEVLA 200 (328)
T ss_dssp TCSEEEE
T ss_pred CCcEEEe
Confidence 7776654
No 266
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=25.45 E-value=1.3e+02 Score=24.90 Aligned_cols=42 Identities=10% Similarity=0.157 Sum_probs=30.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCH-HHHHHHHHhhhccce
Q 046637 49 CVKLASGLAHLGISPGDVVAALAPNVP-AMYELHFGVPMAGAV 90 (301)
Q Consensus 49 ~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~ 90 (301)
.+.++..|.++||.+++.|.++...+. ...-+.|.+-..|.-
T Consensus 98 ~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~ 140 (327)
T 3utn_X 98 KKVFDDAMSNLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHP 140 (327)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCC
Confidence 478999999999999999999976643 233455556666653
No 267
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=25.36 E-value=3e+02 Score=23.00 Aligned_cols=54 Identities=9% Similarity=-0.037 Sum_probs=33.2
Q ss_pred CCCCC--EEEEEcCCCHHHHHHHHHhhhccc--eeeecCCC---CCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGD--VVAALAPNVPAMYELHFGVPMAGA--VLCTLNTR---HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~--~V~i~~~n~~~~~~~~lA~~~~G~--~~v~l~~~---~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++|| .|++..+.-..+.. ++...|+ +.+++++. ...+++...++..++++|+.
T Consensus 128 ~~~gd~~~Vl~~~p~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l 188 (437)
T 3g0t_A 128 THKNREYGTLFIDPGFNLNKL---QCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIY 188 (437)
T ss_dssp SCTTCSCCEEEEESCCHHHHH---HHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEE
T ss_pred CCCCCccEEEEeCCCcHhHHH---HHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEE
Confidence 37888 88888776555432 3334555 44455422 25677888886667777665
No 268
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=25.32 E-value=1.9e+02 Score=24.01 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=29.4
Q ss_pred CCCCCEEEEEcCCCHHHH--HHHHHhhhcccee--eecCC---CCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMY--ELHFGVPMAGAVL--CTLNT---RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~--v~l~~---~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|++..+...... .........+..+ +++++ ....+++...++..++++|++.
T Consensus 115 ~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 179 (425)
T 3ecd_A 115 AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAG 179 (425)
T ss_dssp CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEc
Confidence 578999888776543311 1111112222233 34442 3577899998876677777775
No 269
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=25.26 E-value=3.8e+02 Score=24.96 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC---------C-----CHHHHHHHHHh
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR---------H-----DSAMVSVLLRH 109 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~---------~-----~~~~l~~~l~~ 109 (301)
+++||.|.+..+....+.-. +...|+.++.+++. . ..+.+...++.
T Consensus 242 ~~~GD~Vlv~~~~h~s~~~~---~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~ 301 (755)
T 2vyc_A 242 MTDNDVVVVDRNCHKSIEQG---LMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISE 301 (755)
T ss_dssp CCTTCEEEEESSCCHHHHHH---HHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHH
T ss_pred cCCCCEEEECCCchHHHHHH---HHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHh
Confidence 57999998887776654433 45678877766543 2 67888888865
No 270
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=25.22 E-value=2.6e+02 Score=22.32 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=42.2
Q ss_pred HHHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH
Q 046637 17 ISFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM 77 (301)
Q Consensus 17 ~~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~ 77 (301)
.+++++..+..|+...+.+.| ...++.++.+++...+..|.+.|++ ..++.-|+...
T Consensus 35 ltv~~~i~~~~P~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d----~IVIaCNTas~ 97 (286)
T 2jfq_A 35 LTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIK----MLVIACNTATA 97 (286)
T ss_dssp HHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCS----EEEECCHHHHH
T ss_pred HHHHHHHHHHCCCccEEEeccCCCCCcCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCCchhH
Confidence 466777777888887776543 3578999999999999999876654 66666676653
No 271
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=25.20 E-value=3e+02 Score=23.02 Aligned_cols=44 Identities=16% Similarity=0.216 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC---CCCHHHHHHHHH
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT---RHDSAMVSVLLR 108 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~ 108 (301)
++||.|++..|.-..+.. ++...|+.+++++. ....+++...++
T Consensus 130 ~~gd~Vlv~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~d~~~l~~~l~ 176 (425)
T 2r2n_A 130 NPGDNVLLDEPAYSGTLQ---SLHPLGCNIINVASDESGIVPDSLRDILS 176 (425)
T ss_dssp CTTCEEEEESSCCHHHHH---HHGGGTCEEEEECEETTEECHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHH---HHHHcCCEEEEeCcCCCCCCHHHHHHHHH
Confidence 567777777665544332 23445655544432 235667777775
No 272
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=25.12 E-value=2.5e+02 Score=23.57 Aligned_cols=55 Identities=15% Similarity=0.289 Sum_probs=35.0
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhh-hccceeeecCCC------CCHHHHHHHHHhc-----CceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVP-MAGAVLCTLNTR------HDSAMVSVLLRHS-----EAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~-~~G~~~v~l~~~------~~~~~l~~~l~~~-----~~~~vi~~ 118 (301)
.++||.|.+..+....+.- ++. ..|+.+++++.. ...+.+...++.. ++++|+..
T Consensus 132 ~~~gd~vl~~~p~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~ 198 (435)
T 3piu_A 132 ADPGEAVLIPTPYYPGFDR---DLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVT 198 (435)
T ss_dssp CCTTCEEEEEESCCTTHHH---HTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCCeEEECCCccccHHH---HHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 4678988888777654443 223 467665555432 4678888888763 67766544
No 273
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=25.12 E-value=47 Score=23.52 Aligned_cols=39 Identities=13% Similarity=-0.086 Sum_probs=20.9
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 51 KLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
.+...|.+.|+.+++.|.+++..+.....+...+...|.
T Consensus 67 ~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~ 105 (148)
T 2fsx_A 67 ELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGI 105 (148)
T ss_dssp HHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred HHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCC
Confidence 333344445677777788888777666666666666775
No 274
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=24.86 E-value=1.1e+02 Score=25.01 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=32.2
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCH-HHHHHHHHhhhccce
Q 046637 50 VKLASGLAHLGISPGDVVAALAPNVP-AMYELHFGVPMAGAV 90 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~ 90 (301)
..+...+.++|+.+++.|.+++..+. ....+.+.+...|..
T Consensus 97 ~~~~~~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~ 138 (318)
T 3hzu_A 97 EQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHA 138 (318)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCC
Confidence 46777888899999999999998765 556666777777874
No 275
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=24.71 E-value=3e+02 Score=22.82 Aligned_cols=54 Identities=20% Similarity=0.301 Sum_probs=29.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC-----CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR-----HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+.-..+.. ++...|+.++ ++++. ...+++...++. ++++|+..
T Consensus 107 ~~~gd~Vl~~~~~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~ 167 (411)
T 2o0r_A 107 VEPGSEVLLIEPFYDSYSP---VVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP-RTRALIIN 167 (411)
T ss_dssp CCTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-TEEEEEEE
T ss_pred cCCCCEEEEeCCCcHhHHH---HHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-CceEEEEe
Confidence 3567777777665554332 2334555444 44332 466777777753 55666543
No 276
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=24.71 E-value=87 Score=20.66 Aligned_cols=45 Identities=7% Similarity=-0.050 Sum_probs=31.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccc
Q 046637 38 VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGA 89 (301)
Q Consensus 38 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 89 (301)
..+.+.++.... ...++.+++.|.+++..+.....+...+...|.
T Consensus 37 i~ip~~~l~~~~-------~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~ 81 (110)
T 2k0z_A 37 TLISVNDQEKLA-------DFLSQHKDKKVLLHCRAGRRALDAAKSMHELGY 81 (110)
T ss_dssp EEEETTCHHHHH-------HHHHSCSSSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred EEcCHHHHHHHH-------HhcccCCCCEEEEEeCCCchHHHHHHHHHHCCC
Confidence 356666665432 233577888899999888877777777777774
No 277
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=24.64 E-value=1.7e+02 Score=23.71 Aligned_cols=75 Identities=15% Similarity=0.101 Sum_probs=41.0
Q ss_pred eeeHHHHHHHHHH---HH---HHHHhcCCCCCC-EEEEEcCCCHH-HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc
Q 046637 39 QYTWKETHQRCVK---LA---SGLAHLGISPGD-VVAALAPNVPA-MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS 110 (301)
Q Consensus 39 ~~Ty~el~~~~~~---la---~~L~~~gv~~g~-~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (301)
.+++.+....... .. +.+.+.++++|+ +|+|.+..+.- ..++.+| ...|+.++.+...... + ..++..
T Consensus 119 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a-~~~Ga~vi~~~~~~~~--~-~~~~~l 194 (330)
T 1tt7_A 119 NLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSML-NKRGYDVVASTGNREA--A-DYLKQL 194 (330)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHH-HHHTCCEEEEESSSST--H-HHHHHH
T ss_pred CCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHH--H-HHHHHc
Confidence 5777765433211 11 223456899997 99999985554 4444444 4567766555443221 1 233445
Q ss_pred CceEEEE
Q 046637 111 EAKIIFV 117 (301)
Q Consensus 111 ~~~~vi~ 117 (301)
+++.++-
T Consensus 195 Ga~~v~~ 201 (330)
T 1tt7_A 195 GASEVIS 201 (330)
T ss_dssp TCSEEEE
T ss_pred CCcEEEE
Confidence 6665553
No 278
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=24.63 E-value=3e+02 Score=22.84 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCCCHHHHHHH-HHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELH-FGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||+|.+..+.-....-.+ -.+...|+.+..++.. ..+++...++. +.++|+++
T Consensus 102 ~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~i~~-~~~~v~~~ 158 (392)
T 3qhx_A 102 LRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-DLDAVRAAIRP-TTRLIWVE 158 (392)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT-CHHHHHHHCCT-TEEEEEEE
T ss_pred hCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-CHHHHHHhhCC-CCeEEEEE
Confidence 467777776665554333222 1224456666655443 56666666643 55666653
No 279
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=24.61 E-value=2.9e+02 Score=22.73 Aligned_cols=71 Identities=6% Similarity=-0.024 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhc-CCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 48 RCVKLASGLAHL-GISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 48 ~~~~la~~L~~~-gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
....+...+.+. |.... .+.++..++.+ ...++.++..-|-.++...+.+........++..+.+++.++-
T Consensus 47 ~~~~~~~~la~~~~~~~~-~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (411)
T 3nnk_A 47 YMNEVMALYRGVFRTENR-WTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV 119 (411)
T ss_dssp HHHHHHHHHHHHHTCCCS-EEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCC-cEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEec
Confidence 334444444443 55543 44455555454 4445555566676666666766555577788888888877764
No 280
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=24.61 E-value=2.7e+02 Score=22.33 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=35.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC----CCCHHHHHHHHHh-cCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT----RHDSAMVSVLLRH-SEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~-~~~~~vi~~ 118 (301)
.++||.|.+..+....+. -++...|+.++.++. ....+++...++. .++++|++.
T Consensus 89 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~ 148 (354)
T 3ly1_A 89 ASLEAQLVIPELTYGDGE---HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLV 148 (354)
T ss_dssp CCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEE
T ss_pred hCCCCeEEECCCCchHHH---HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEe
Confidence 468888888877655543 234456765554432 2367888888875 567777763
No 281
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=24.54 E-value=3e+02 Score=22.68 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=36.2
Q ss_pred cCCCCCCEEEEEcC-CCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 59 LGISPGDVVAALAP-NVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 59 ~gv~~g~~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++++|++|+|.+. ..+-..++.+|. ..|+.++.+... .+.+ ..++..+++.++-.
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~-~~Ga~Vi~~~~~--~~~~-~~~~~~Ga~~~~~~ 215 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSK-KAKCHVIGTCSS--DEKS-AFLKSLGCDRPINY 215 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHH-HTTCEEEEEESS--HHHH-HHHHHTTCSEEEET
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHH-hCCCEEEEEECC--HHHH-HHHHHcCCcEEEec
Confidence 47999999999995 455566666555 458766665433 3333 34556777766643
No 282
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=24.47 E-value=2.9e+02 Score=22.53 Aligned_cols=80 Identities=13% Similarity=0.002 Sum_probs=46.7
Q ss_pred eeeeHHHHHHHHHHH--H-HHHH-hcCCC------CCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHH
Q 046637 38 VQYTWKETHQRCVKL--A-SGLA-HLGIS------PGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLL 107 (301)
Q Consensus 38 ~~~Ty~el~~~~~~l--a-~~L~-~~gv~------~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (301)
..+++.+........ | ..|. ..+++ +|++|+|.+..+.--..+.-.+...|+.++.+.. +++. ...+
T Consensus 115 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~--~~~~-~~~~ 191 (346)
T 3fbg_A 115 KNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTAS--RNET-IEWT 191 (346)
T ss_dssp SSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC--SHHH-HHHH
T ss_pred CCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC--CHHH-HHHH
Confidence 357777764332222 2 1233 34787 8999999965555444444444477887776644 3344 3445
Q ss_pred HhcCceEEEEcCC
Q 046637 108 RHSEAKIIFVDYQ 120 (301)
Q Consensus 108 ~~~~~~~vi~~~~ 120 (301)
+..+++.++...+
T Consensus 192 ~~lGa~~vi~~~~ 204 (346)
T 3fbg_A 192 KKMGADIVLNHKE 204 (346)
T ss_dssp HHHTCSEEECTTS
T ss_pred HhcCCcEEEECCc
Confidence 5677877765543
No 283
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=24.25 E-value=2.8e+02 Score=24.74 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=44.2
Q ss_pred cCCCCCCEEEEEcCCCHH---HHHHH-HHhhhcccee-------eecCCCCCHHHHHHHHHhcCceEEEEcCCchhhH
Q 046637 59 LGISPGDVVAALAPNVPA---MYELH-FGVPMAGAVL-------CTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLPIA 125 (301)
Q Consensus 59 ~gv~~g~~V~i~~~n~~~---~~~~~-lA~~~~G~~~-------v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 125 (301)
..+++||.|.+.+..-+. .+.-+ =.+.+.|+-+ +.++-+.+.+++..+++..+|+.++.-......+
T Consensus 319 ~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~ 396 (555)
T 3zq4_A 319 ISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQ 396 (555)
T ss_dssp CCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEEEEEEESBCHHHH
T ss_pred cccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCCEEEEcCCCHHHH
Confidence 357899999887765332 11111 1346677754 3456678889999999999999777655444333
No 284
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=24.18 E-value=1.3e+02 Score=23.00 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEcCCCHH--HHHHHH---HhhhccceeeecCCCCCHHHHHHHHH
Q 046637 60 GISPGDVVAALAPNVPA--MYELHF---GVPMAGAVLCTLNTRHDSAMVSVLLR 108 (301)
Q Consensus 60 gv~~g~~V~i~~~n~~~--~~~~~l---A~~~~G~~~v~l~~~~~~~~l~~~l~ 108 (301)
|+.+|+.++|++||+.- .++-.+ ++...|...+.+....+.+.+....+
T Consensus 26 gi~~G~~~~l~GpnGsGKSTLl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (251)
T 2ehv_A 26 GFPEGTTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRREMA 79 (251)
T ss_dssp SEETTCEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHH
T ss_pred CCCCCcEEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHH
Confidence 89999999999999863 222222 23233433344444445555544443
No 285
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=24.06 E-value=3.2e+02 Score=22.91 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=38.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc---CceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS---EAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vi~~~ 119 (301)
.++||.|.+..+....+. -++...|+.++.++ ....+++...++.. ++++|+++.
T Consensus 145 ~~~gd~vl~~~~~h~~~~---~~~~~~g~~~~~~~-~~d~~~le~~l~~~~~~~~~~v~~~~ 202 (427)
T 2w8t_A 145 AGKGEYVILDADSHASIY---DGCQQGNAEIVRFR-HNSVEDLDKRLGRLPKEPAKLVVLEG 202 (427)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSCSEEEEEC-TTCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred cCCCCEEEECCcccHHHH---HHHHHcCCeeEEeC-CCCHHHHHHHHHhccCCCCeEEEEcC
Confidence 468898888777766543 34456687777764 46788899998775 677777764
No 286
>2k5l_A FEOA; structure, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium thermocellum atcc 27405}
Probab=23.80 E-value=70 Score=19.99 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=17.7
Q ss_pred HHHHHHHhcCCCCCCEEEEEcC
Q 046637 51 KLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~ 72 (301)
.+.+.|.++|+.+|..|-+...
T Consensus 23 ~~~~rL~~lGl~pG~~v~V~~~ 44 (81)
T 2k5l_A 23 ALKRRIMDMGITRGCEIYIRKV 44 (81)
T ss_dssp HHHHHHHHHTCCTTCEEEEEEE
T ss_pred HHHHHHHHCCCCCCCEEEEEEe
Confidence 4667799999999999887643
No 287
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=23.76 E-value=2.7e+02 Score=22.95 Aligned_cols=54 Identities=19% Similarity=0.212 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc-----CceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS-----EAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~-----~~~~vi~~ 118 (301)
.++||.|.+-.+...... -++...|+.+++++ ....+++...++.. ++++|+..
T Consensus 126 ~~~gd~v~~~~~~~~~~~---~~~~~~g~~~~~~~-~~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 126 LGAEDAIISDALNHASII---DGVRLCKAKRYRYA-NNDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp CCTTCEEEEETTCCHHHH---HHHHTSCSEEEEEC-TTCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred cCCCCEEEEcchhHHHHH---HHHHHcCCceEEEC-CCCHHHHHHHHHHhhccCCCceEEEEe
Confidence 467887777666544332 24556777777764 34677888877653 56676664
No 288
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=23.65 E-value=80 Score=18.21 Aligned_cols=20 Identities=35% Similarity=0.657 Sum_probs=16.8
Q ss_pred eHHHHHHHHHHHHHHHHhcC
Q 046637 41 TWKETHQRCVKLASGLAHLG 60 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~g 60 (301)
||.||.++...+-..|+.+|
T Consensus 3 swaefkqrlaaiktrlqalg 22 (73)
T 2a3d_A 3 SWAEFKQRLAAIKTRLQALG 22 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHHHHHHhc
Confidence 68888888888888888875
No 289
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=23.46 E-value=1.1e+02 Score=25.33 Aligned_cols=54 Identities=20% Similarity=0.290 Sum_probs=33.7
Q ss_pred eeHHHHHHHHHHHH---HHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce-eeecC
Q 046637 40 YTWKETHQRCVKLA---SGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV-LCTLN 95 (301)
Q Consensus 40 ~Ty~el~~~~~~la---~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~ 95 (301)
+++.+..-. ..++ +.|...++++|++|+|.+....-..++.+| ...|+. ++...
T Consensus 154 ~s~~~aa~~-~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 154 MSYENGAML-EPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCA-KAAGACPLVITD 211 (363)
T ss_dssp CCHHHHHHH-HHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEEE
T ss_pred CCHHHHHhh-hHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEC
Confidence 777775533 2222 234556899999999999844445555554 467875 55553
No 290
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=23.42 E-value=3.1e+02 Score=22.53 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=35.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHH-HHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELH-FGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+ ..+...|+.++.++.. ..+++...++. ++++|+..
T Consensus 88 ~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~i~~-~~~~v~~~ 144 (386)
T 1cs1_A 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-DEQALRAALAE-KPKLVLVE 144 (386)
T ss_dssp CCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT-CHHHHHHHHHT-CCSEEEEE
T ss_pred hCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-CHHHHHHhhcc-CCcEEEEe
Confidence 468898888887766544333 2234567766666443 67888887764 56666665
No 291
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=23.17 E-value=2.6e+02 Score=23.23 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=27.7
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCCC----CCHHHHHHHHHhcCceEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNTR----HDSAMVSVLLRHSEAKIIF 116 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~----~~~~~l~~~l~~~~~~~vi 116 (301)
.++||.|++..+.-..+.. ++...|+.++ ++++. ...+++...++. +.++++
T Consensus 125 ~~~gd~vl~~~p~y~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 182 (416)
T 1bw0_A 125 CDAGDYALVPQPGFPHYET---VCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD-KTKLLI 182 (416)
T ss_dssp CCTTCEEEEEESCCTHHHH---HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-TEEEEE
T ss_pred CCCCCEEEEcCCCcHhHHH---HHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc-CCeEEE
Confidence 4577888777776554432 3344565444 33332 356777766643 334443
No 292
>2lx9_A Ferrous iron transport protein A; FEOA; NMR {Escherichia coli}
Probab=22.94 E-value=91 Score=19.65 Aligned_cols=21 Identities=24% Similarity=0.403 Sum_probs=17.9
Q ss_pred HHHHHHHHhcCCCCCCEEEEE
Q 046637 50 VKLASGLAHLGISPGDVVAAL 70 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~ 70 (301)
..+.+.|.++|+.+|..|-+.
T Consensus 20 ~~~~rrL~~mGl~pG~~V~Vi 40 (83)
T 2lx9_A 20 PAYRQKLLSLGMLPGSSFNVV 40 (83)
T ss_dssp HHHHHHHHHSSCCSSSEEEEE
T ss_pred HHHHHHHHHCCCCCCCEEEEE
Confidence 456778999999999998887
No 293
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=22.90 E-value=3.2e+02 Score=22.48 Aligned_cols=29 Identities=3% Similarity=0.059 Sum_probs=16.6
Q ss_pred EEEeccCC--CCCCCeeeechHHHHHHHHHH
Q 046637 187 ALNYTSGT--TSSPKGVICSHRGAYLNSLAA 215 (301)
Q Consensus 187 ~i~~TSGt--TG~pK~v~~s~~~l~~~~~~~ 215 (301)
++++|.+- +|..-|.++..+.++..+...
T Consensus 201 i~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~ 231 (374)
T 2aeu_A 201 LVVTSTDKLMEGPRGGLLAGKKELVDKIYIE 231 (374)
T ss_dssp EEEEETTSSSSSCSCEEEEEEHHHHHHHHHH
T ss_pred EEEecCcccccCcceEEEEECHHHHHHHHHh
Confidence 34444333 254457777888777655543
No 294
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=22.85 E-value=1.6e+02 Score=24.40 Aligned_cols=59 Identities=15% Similarity=0.147 Sum_probs=30.2
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHH--hhhccceeee--cCCC--CCHHHHHHHHHhcCceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFG--VPMAGAVLCT--LNTR--HDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA--~~~~G~~~v~--l~~~--~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
+++||.|.+..+........... ....+..+++ ++.. ...+++...++..++++|++..
T Consensus 108 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (417)
T 3n0l_A 108 INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGA 172 (417)
T ss_dssp SCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECC
T ss_pred cCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECC
Confidence 57899988887755432221111 2223333444 3322 4678899888766777777653
No 295
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=22.63 E-value=1.6e+02 Score=18.99 Aligned_cols=45 Identities=16% Similarity=0.254 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHhhhcC--------------CccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q 046637 13 PLTPISFLERSAVVYR--------------DRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 13 ~~~~~~~l~~~~~~~~--------------~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~ 72 (301)
..++.++++....++| ...++...++.+.. ..-++.||.|+++-|
T Consensus 36 ~~Tv~~Ll~~L~~~~p~l~~~l~~~~g~~~~~v~v~VNg~~v~~---------------~~~L~dGDeV~i~pp 94 (98)
T 1vjk_A 36 GARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSW---------------DEELKDGDVVGVFPP 94 (98)
T ss_dssp TCBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEEETTBCCCT---------------TCBCCTTCEEEEESC
T ss_pred CCCHHHHHHHHHhHChhHHHHhhccccccCCcEEEEECCEECCC---------------CCCCCCCCEEEEECC
Confidence 4688898888887775 34555556655541 345899999998765
No 296
>2h3j_A Hypothetical protein PA4359; NESG, GFT structural genomics, PAT89, PSI-2, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.34.1.2
Probab=22.62 E-value=71 Score=19.40 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=17.8
Q ss_pred HHHHHHHhcCCCCCCEEEEEcC
Q 046637 51 KLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~ 72 (301)
.+.+.|.++|+.+|..|-+...
T Consensus 22 ~~~~rL~~lGl~~G~~v~v~~~ 43 (75)
T 2h3j_A 22 GYRQRLFSMGLLPGAALRVVRI 43 (75)
T ss_dssp THHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCCCEEEEEEE
Confidence 3567799999999999988654
No 297
>3ccd_A Phosphocarrier protein HPR; succinimide, isoaspartate, protein damage, autophosphatase, transferase; 1.00A {Escherichia coli} PDB: 1cm3_A 1cm2_A 1ggr_B 1hdn_A 1j6t_B 1pfh_A* 1poh_A 1vrc_C 2jel_P 2xdf_C 3eza_B 3ezb_B 3eze_B 1opd_A
Probab=22.56 E-value=1.5e+02 Score=18.68 Aligned_cols=49 Identities=22% Similarity=0.265 Sum_probs=38.3
Q ss_pred HHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q 046637 16 PISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 16 ~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~ 72 (301)
....|-+.+++++-.+-+..+++.+.-+-+. ++..+|+++|+.|-|...
T Consensus 18 pAa~~v~~a~~f~s~I~i~~~~~~vnaKSim--------~lm~Lg~~~G~~i~i~~~ 66 (85)
T 3ccd_A 18 PAAQFVKEAKGFTSEITVTSNGKSASAKSLF--------KLQTLGLTQGTVVTISAE 66 (85)
T ss_dssp HHHHHHHHHTTSCSEEEEEETTEEEETTCHH--------HHTTSCCCTTCEEEEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEECCEEEehHhHH--------HHHhCCCCCCCEEEEEEe
Confidence 3467888899999999999888877765443 366889999998887654
No 298
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=22.52 E-value=78 Score=18.59 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=13.9
Q ss_pred HHhcCCCCCCEEEEEcCC
Q 046637 56 LAHLGISPGDVVAALAPN 73 (301)
Q Consensus 56 L~~~gv~~g~~V~i~~~n 73 (301)
..++|+++||.|.+...+
T Consensus 31 R~~Lgi~~Gd~l~i~~~~ 48 (59)
T 1yfb_A 31 RRTLGIAEKDALEIYVDD 48 (59)
T ss_dssp HHHTTCCTTCEEEEEEET
T ss_pred HHHcCCCCCCEEEEEEEC
Confidence 346799999998887654
No 299
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=22.48 E-value=3.3e+02 Score=22.44 Aligned_cols=74 Identities=7% Similarity=-0.060 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHhc-CCCCCCEEEEEcCCCHH-HHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 46 HQRCVKLASGLAHL-GISPGDVVAALAPNVPA-MYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 46 ~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
.+....+...|.+. |..+ +.+.++..++.+ ...++.++..-|-.++...+.+....+...++..+.+++.++-+
T Consensus 43 ~~~~~~l~~~la~~~g~~~-~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 118 (416)
T 3isl_A 43 TGIMNETMEMLRELFQTKN-RWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECE 118 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCC-SEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCC-CcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecC
Confidence 34445555555554 6554 445545566545 44444555556656666666655545777888888888887643
No 300
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=22.34 E-value=3.7e+02 Score=23.07 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=40.1
Q ss_pred HhcC-CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcC
Q 046637 57 AHLG-ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 57 ~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
.+.| +++|+.|.... .+=.-..+.++|...|..++.+-|...+.+-...++..++++++++.
T Consensus 153 ~~~G~l~~g~tVV~aS-sGN~G~AlA~aaa~~Gi~~~IvmP~~~s~~k~~~l~~~GAeVv~v~~ 215 (435)
T 1jbq_A 153 ERDGTLKPGDTIIEPT-SGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPT 215 (435)
T ss_dssp HHHTCSCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC
T ss_pred HHcCCCCCCCEEEEeC-CCHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHhCCCEEEEecC
Confidence 3445 46777655442 23334445566678888665555554556677888999999999874
No 301
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=22.28 E-value=3.4e+02 Score=22.51 Aligned_cols=56 Identities=14% Similarity=0.256 Sum_probs=30.1
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHH-hhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFG-VPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+-. +...|+.+..++.. ..+++...++. ++++|+++
T Consensus 101 ~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-d~~~l~~~i~~-~~~~v~~~ 157 (398)
T 1gc0_A 101 LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-DLQALEAAMTP-ATRVIYFE 157 (398)
T ss_dssp CCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-CHHHHHHHCCT-TEEEEEEE
T ss_pred hcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-CHHHHHHhcCC-CCeEEEEE
Confidence 45677777666655443332211 24456665555442 55666666643 55666654
No 302
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=22.20 E-value=2.3e+02 Score=20.71 Aligned_cols=21 Identities=19% Similarity=0.175 Sum_probs=19.3
Q ss_pred eeeHHHHHHHHHHHHHHHHhc
Q 046637 39 QYTWKETHQRCVKLASGLAHL 59 (301)
Q Consensus 39 ~~Ty~el~~~~~~la~~L~~~ 59 (301)
-+||.|+.+.+.++|..+.+.
T Consensus 8 l~s~~~i~~~i~~La~~I~~~ 28 (177)
T 3ohp_A 8 MISEQEVAQRIRELGQQITEH 28 (177)
T ss_dssp EECHHHHHHHHHHHHHHHHHH
T ss_pred eeCHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999875
No 303
>2cqa_A RUVB-like 2; TIP48, TIP49B, reptin 52, ECP-51, TAP54-beta, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.40.4.14
Probab=22.17 E-value=1.2e+02 Score=19.92 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=19.4
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCC
Q 046637 50 VKLASGLAHLGISPGDVVAALAPN 73 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~n 73 (301)
..++..|.+.++..||.|.|-...
T Consensus 52 ~~i~e~L~kekV~~GDVI~Id~~s 75 (95)
T 2cqa_A 52 TKMIESLTKDKVQAGDVITIDKAT 75 (95)
T ss_dssp SHHHHHHHHTTCCTTSEEEEETTT
T ss_pred HHHHHHHHHcCceeCCEEEEEccC
Confidence 467788999999999998876554
No 304
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=22.14 E-value=1.2e+02 Score=20.82 Aligned_cols=48 Identities=8% Similarity=-0.027 Sum_probs=29.5
Q ss_pred EEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE
Q 046637 68 AALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII 115 (301)
Q Consensus 68 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 115 (301)
++++-+.....-.+=.|...|+-.+.+.+....+++.++.+..+.+++
T Consensus 62 avi~~p~~~v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGIEPV 109 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTCEEE
T ss_pred EEEEeCHHHHHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCCeEE
Confidence 333333344444444555666666667777777777778777777655
No 305
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=22.12 E-value=94 Score=25.14 Aligned_cols=52 Identities=6% Similarity=0.061 Sum_probs=39.0
Q ss_pred eeeHHHHHHH------HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 39 QYTWKETHQR------CVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 39 ~~Ty~el~~~------~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.+.|.++... ...+...|.+.++.+++.|.++|..+.....+.+++..+|..
T Consensus 223 niP~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~~ 280 (302)
T 3olh_A 223 NIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKP 280 (302)
T ss_dssp ECCGGGGBCSSSCBCCHHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTCC
T ss_pred ecCHHHhcCCCCccCCHHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCCC
Confidence 4566666432 345666677778999999999999988887888888888874
No 306
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=21.96 E-value=1.7e+02 Score=19.12 Aligned_cols=54 Identities=15% Similarity=0.059 Sum_probs=33.2
Q ss_pred CCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCC
Q 046637 64 GDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQ 120 (301)
Q Consensus 64 g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 120 (301)
+.+|.++-++....-..--.+...|..+.. ..+.++....++..+++++|+|-.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~---~~~~~~a~~~l~~~~~dlvi~d~~ 60 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLGATTVL---AADGVDALELLGGFTPDLMICDIA 60 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTTCEEEE---ESCHHHHHHHHTTCCCSEEEECCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCCceEEE---eCCHHHHHHHHhcCCCCEEEEecC
Confidence 447777776644333333333445655443 346677777888888999999854
No 307
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=21.94 E-value=98 Score=25.47 Aligned_cols=63 Identities=24% Similarity=0.251 Sum_probs=35.9
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecC--CC---CCHHHHHHHHHhcCceEEEEc
Q 046637 52 LASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLN--TR---HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 52 la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~---~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+...|...++++||.|.+..+...... .++...|+.++.++ +. ...+++...++ -++++|+..
T Consensus 63 l~~al~~~~~~~gd~Vi~~~~~~~~~~---~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~ 130 (367)
T 3nyt_A 63 LQIVQMALGVGPGDEVITPGFTYVATA---ETVALLGAKPVYVDIDPRTYNLDPQLLEAAIT-PRTKAIIPV 130 (367)
T ss_dssp HHHHHHHTTCCTTCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCGGGTGGGCC-TTEEEECCB
T ss_pred HHHHHHHhCCCCcCEEEECCCccHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHhcC-cCCcEEEee
Confidence 333455556788988887776555433 33455676555443 32 24566666553 256666654
No 308
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=21.90 E-value=1.9e+02 Score=23.75 Aligned_cols=39 Identities=10% Similarity=0.042 Sum_probs=33.2
Q ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC
Q 046637 59 LGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR 97 (301)
Q Consensus 59 ~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 97 (301)
.|+.+++.|.++|..+....+.++|+..+|..-+-++.+
T Consensus 270 ~gid~~k~vI~yCgsGvtA~~~~laL~~lG~~~v~lYdG 308 (327)
T 3utn_X 270 CTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDG 308 (327)
T ss_dssp CCCCTTSCEEEECSSSHHHHHHHHHHHHTTCCSEEEESS
T ss_pred cCCCCCCCEEEECChHHHHHHHHHHHHHcCCCCceeCCC
Confidence 388899999999999999999999999999765656554
No 309
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=21.77 E-value=1.5e+02 Score=23.65 Aligned_cols=84 Identities=8% Similarity=0.106 Sum_probs=48.9
Q ss_pred eHHHHHHHHHHHHHHHHhc--CCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC--CCH---HHHHHHHHhcCce
Q 046637 41 TWKETHQRCVKLASGLAHL--GISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR--HDS---AMVSVLLRHSEAK 113 (301)
Q Consensus 41 Ty~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~--~~~---~~l~~~l~~~~~~ 113 (301)
.++++.++.+.+-..+++. .+ ++.. .+...+...++.-.+++-..|.. .+++. -++ .++...++..+++
T Consensus 153 N~~~~~~~L~~Ld~~~~~~l~~~-~~~~-~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~ 228 (284)
T 3cx3_A 153 NAQAFIKKAQELTKKFQPKFEKA-TQKT-FVTQHTAFSYLAKRFGLNQLGIA--GISPEQEPSPRQLTEIQEFVKTYKVK 228 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSC-SCCC-EEEEESCCHHHHHHTTCCEEEEE--CSSTTCCCCSHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CCCE-EEEECCchHHHHHHcCCEEeecc--CCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 3444555555555544432 33 3333 45556678888887877655532 23332 333 4566667788999
Q ss_pred EEEEcCCchhhHHHH
Q 046637 114 IIFVDYQLLPIAQGA 128 (301)
Q Consensus 114 ~vi~~~~~~~~~~~~ 128 (301)
+||++........+.
T Consensus 229 ~if~e~~~~~~~~~~ 243 (284)
T 3cx3_A 229 TIFTESNASSKVAET 243 (284)
T ss_dssp CEEECSSSCCHHHHH
T ss_pred EEEEeCCCCcHHHHH
Confidence 999998776554333
No 310
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=21.76 E-value=2.7e+02 Score=22.18 Aligned_cols=56 Identities=11% Similarity=0.131 Sum_probs=35.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHH-hhhccceeeecCCCCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFG-VPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+........+.. +...|+.+..++. ...+++...++ -+.++|+..
T Consensus 34 ~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~d~~~l~~~i~-~~~~~v~~~ 90 (331)
T 1pff_A 34 LKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-AVPGNIEKHLK-PNTRIVYFE 90 (331)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-TSTTHHHHTCC-TTEEEEEEE
T ss_pred cCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-CCHHHHHHhhc-CCCeEEEEE
Confidence 46899998888876665444322 3456777666654 35566766665 356677664
No 311
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=21.73 E-value=3e+02 Score=21.78 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=43.5
Q ss_pred eeeeHHHHHHHH--------HHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceee-ecCCCCCHHHHHHHHH
Q 046637 38 VQYTWKETHQRC--------VKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLC-TLNTRHDSAMVSVLLR 108 (301)
Q Consensus 38 ~~~Ty~el~~~~--------~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~ 108 (301)
+.+||+|+.+.. ..+........-..+.+|.++-.+....-..--.+-..|..++ .. .+.++....+.
T Consensus 126 eg~s~~EIA~~lgis~~tVks~l~rA~~~Lr~~l~~rILvVdD~~~~~~~l~~~L~~~g~~v~~~a---~~g~eAl~~~~ 202 (286)
T 3n0r_A 126 EGFTPTEAAQILDCDFGEVERLIGDAQAEIDAELATEVLIIEDEPVIAADIEALVRELGHDVTDIA---ATRGEALEAVT 202 (286)
T ss_dssp TCCCHHHHHHHHTCCHHHHHHHHHHHHHHHHTSCCCEEEEECCSHHHHHHHHHHHHHTTCEEEEEE---SSHHHHHHHHH
T ss_pred CCCCHHHHHHHhCcCHHHHHHHHHHHHhhhhccCCCcEEEEcCCHHHHHHHHHHhhccCceEEEEe---CCHHHHHHHHH
Confidence 357787776554 2233333332223345676665553333333333344576554 33 24456666777
Q ss_pred hcCceEEEEcCCc
Q 046637 109 HSEAKIIFVDYQL 121 (301)
Q Consensus 109 ~~~~~~vi~~~~~ 121 (301)
..++++|++|-..
T Consensus 203 ~~~~dlvl~D~~M 215 (286)
T 3n0r_A 203 RRTPGLVLADIQL 215 (286)
T ss_dssp HCCCSEEEEESCC
T ss_pred hCCCCEEEEcCCC
Confidence 7889999998543
No 312
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=21.72 E-value=1.4e+02 Score=22.58 Aligned_cols=54 Identities=15% Similarity=0.094 Sum_probs=35.1
Q ss_pred hcCCCCCCEEEEEcCCCHH--HHHHHH--HhhhccceeeecCCCCCHHHHHHHHHhcC
Q 046637 58 HLGISPGDVVAALAPNVPA--MYELHF--GVPMAGAVLCTLNTRHDSAMVSVLLRHSE 111 (301)
Q Consensus 58 ~~gv~~g~~V~i~~~n~~~--~~~~~l--A~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (301)
.-|+.+|+.++|.++|+.- .++..+ .+...|..++.++...+.+++...+...+
T Consensus 17 ~gGl~~G~~~~i~G~~GsGKTtl~~~~~~~~~~~~~~v~~~~~e~~~~~~~~~~~~~g 74 (247)
T 2dr3_A 17 HGGIPERNVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALEEHPVQVRQNMAQFG 74 (247)
T ss_dssp TTSEETTCEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEESSSCHHHHHHHHHTTT
T ss_pred CCCCCCCcEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccCCHHHHHHHHHHcC
Confidence 3489999999999999863 222222 23344556666666777777777666443
No 313
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=21.70 E-value=1.4e+02 Score=21.97 Aligned_cols=38 Identities=8% Similarity=0.006 Sum_probs=27.5
Q ss_pred cCCCCCCEEEEEcCCCH--HHHHHHHHhhhccceeeecCC
Q 046637 59 LGISPGDVVAALAPNVP--AMYELHFGVPMAGAVLCTLNT 96 (301)
Q Consensus 59 ~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~ 96 (301)
..+.++|+|.++++++. ..+-....+-.-|..++.+..
T Consensus 73 ~~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 73 KTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 37899999999987754 455566666677777666655
No 314
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=21.61 E-value=68 Score=25.81 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=28.2
Q ss_pred hccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCchh
Q 046637 86 MAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLLP 123 (301)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 123 (301)
..|..+..++. ...+++...++..+++++|.|.-...
T Consensus 45 ~~g~~v~~l~~-~d~~~~~~~l~~~~~d~lIvD~Y~~~ 81 (282)
T 3hbm_A 45 EIPYPVYELSS-ESIYELINLIKEEKFELLIIDHYGIS 81 (282)
T ss_dssp GCCSCEEECSS-SCHHHHHHHHHHHTCSEEEEECTTCC
T ss_pred HCCCeEEEcCc-cCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 34877777754 46788899999999999999975443
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=21.58 E-value=3.2e+02 Score=22.01 Aligned_cols=56 Identities=13% Similarity=0.102 Sum_probs=35.7
Q ss_pred hcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEE
Q 046637 58 HLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIF 116 (301)
Q Consensus 58 ~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 116 (301)
..++++|++|.|.+..+.--..+.-.+...|+.++.+.. +.+.+... +..+++.++
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~--~~~~~~~~-~~~g~~~~~ 195 (333)
T 1v3u_A 140 VCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG--SDEKIAYL-KQIGFDAAF 195 (333)
T ss_dssp TSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES--SHHHHHHH-HHTTCSEEE
T ss_pred hhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC--CHHHHHHH-HhcCCcEEE
Confidence 348999999999998655444444444567876666643 34555444 666666554
No 316
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=21.44 E-value=1.5e+02 Score=22.42 Aligned_cols=53 Identities=9% Similarity=0.039 Sum_probs=32.1
Q ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHh---h-------hccceeeecCCCCCHHHHHHHHHhcC
Q 046637 59 LGISPGDVVAALAPNVPA--MYELHFGV---P-------MAGAVLCTLNTRHDSAMVSVLLRHSE 111 (301)
Q Consensus 59 ~gv~~g~~V~i~~~n~~~--~~~~~lA~---~-------~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (301)
-|+.+|+.++|+++|+.- .++..++. . ..|.+++-.....+.+++..+++..+
T Consensus 19 ggi~~G~~~~i~G~~GsGKTtl~~~l~~~~~~~~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~g 83 (243)
T 1n0w_A 19 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYG 83 (243)
T ss_dssp TSEETTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHHHHHHHHHHTT
T ss_pred CCCcCCeEEEEECCCCCcHHHHHHHHHHHHhCchhcCCCCCeEEEEECCCCcCHHHHHHHHHHcC
Confidence 478999999999999753 33333333 2 12344444444446676666665544
No 317
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=21.31 E-value=1.1e+02 Score=24.97 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=27.3
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC--C--CCHHHHHHHHHhcCceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT--R--HDSAMVSVLLRHSEAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~vi~ 117 (301)
+++||.|.+..+....... ++...|+.++.++. . ...+++...++. +.++|+.
T Consensus 71 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 127 (375)
T 2fnu_A 71 SADRNEIITTPISFVATAN---MLLESGYTPVFAGIKNDGNIDELALEKLINE-RTKAIVS 127 (375)
T ss_dssp CTTSCEEEECSSSCTHHHH---HHHHTTCEEEECCBCTTSSBCGGGSGGGCCT-TEEEEEE
T ss_pred CCCCCEEEECCCccHhHHH---HHHHCCCEEEEeccCCCCCCCHHHHHhhcCc-CceEEEE
Confidence 6778887776665554433 23345665544432 2 244555554432 4555443
No 318
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=21.28 E-value=2.6e+02 Score=22.63 Aligned_cols=50 Identities=6% Similarity=-0.033 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEEEEcCCch
Q 046637 73 NVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKIIFVDYQLL 122 (301)
Q Consensus 73 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 122 (301)
.+=.-....++|...|..++.+-|...+.+-...++..++++++++....
T Consensus 82 sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 131 (323)
T 1v71_A 82 SGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKD 131 (323)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTTTT
T ss_pred CCcHHHHHHHHHHHcCCCEEEECCCCCcHHHHHHHHHcCCEEEEECCCHH
Confidence 34445556666778888665554544456677889999999999987543
No 319
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=21.28 E-value=1.1e+02 Score=25.19 Aligned_cols=60 Identities=22% Similarity=0.256 Sum_probs=34.8
Q ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC----CCHHHHHHHHHhcCceEEEEc
Q 046637 55 GLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR----HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 55 ~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.+...++++||.|.+..+....+.. ++...|+.++.++.. ...+++...++. ++++++..
T Consensus 69 ~~~~~~~~~gd~v~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 132 (374)
T 3uwc_A 69 SFKMLNIGAGDEVITCANTFIASVG---AIVQAGATPVLVDSENGYVIDPEKIEAAITD-KTKAIMPV 132 (374)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTSSBCGGGTGGGCCT-TEEEECCB
T ss_pred HHHHcCCCCCCEEEECCCccHHHHH---HHHHcCCEEEEEecCCCCCcCHHHHHHhCCC-CceEEEEe
Confidence 3445567888988888776665442 345567655554432 244556555543 56666643
No 320
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=21.15 E-value=2.2e+02 Score=23.59 Aligned_cols=54 Identities=20% Similarity=0.214 Sum_probs=30.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceee--ecCC--C--CCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLC--TLNT--R--HDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~--~--~~~~~l~~~l~~~~~~~vi~~ 118 (301)
+++||.|.+..+.-..+.. ++...|+.++ ++++ . ...+++...++. ++++|+..
T Consensus 122 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~i~ 181 (406)
T 1xi9_A 122 LDPGDEILVPGPSYPPYTG---LVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-RTKAIAVI 181 (406)
T ss_dssp CCTTCEEEEEESCCHHHHH---HHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCCEEEEcCCCCccHHH---HHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-CceEEEEE
Confidence 4678888877776554332 2334565444 4433 1 256777777754 56665554
No 321
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=21.12 E-value=2.4e+02 Score=23.30 Aligned_cols=56 Identities=7% Similarity=0.018 Sum_probs=34.5
Q ss_pred hcCCC--C-------CCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCC-CHHHHHHHHHhcCceEE
Q 046637 58 HLGIS--P-------GDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRH-DSAMVSVLLRHSEAKII 115 (301)
Q Consensus 58 ~~gv~--~-------g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~v 115 (301)
..+++ + |++|+|.+...+-..++.+| ...|+.++.+.... ..+.+ .+++..+++.+
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ga~~v 231 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ-TVIEETKTNYY 231 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH-HHHHHHTCEEE
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH-HHHHHhCCcee
Confidence 45788 8 99999999933444444444 45687666654432 11333 45566777766
No 322
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=20.98 E-value=3.7e+02 Score=22.44 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=33.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhh-ccceeeecC--C---CCCHHHHHHHHHhc--CceEEEE
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPM-AGAVLCTLN--T---RHDSAMVSVLLRHS--EAKIIFV 117 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~-~G~~~v~l~--~---~~~~~~l~~~l~~~--~~~~vi~ 117 (301)
.++||.|.+..+.-..+. .++.. .|+.++.++ + ....+++...++.. ++++++.
T Consensus 134 ~~~gd~Vl~~~p~y~~~~---~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i 195 (430)
T 2x5f_A 134 VNQDDTILLPEHNWGNYK---LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMIL 195 (430)
T ss_dssp CCTTCEEEEESSCCTHHH---HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEE
T ss_pred hCCCCEEEEcCCcCccHH---HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEE
Confidence 368999988877655543 23334 676555443 3 24568888888763 5666554
No 323
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=20.92 E-value=3.7e+02 Score=22.66 Aligned_cols=56 Identities=18% Similarity=0.040 Sum_probs=35.5
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhcCceEE-EEc
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHSEAKII-FVD 118 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v-i~~ 118 (301)
++|+.| +-...+=.-..+.++|.+.|.-++.+-|...+.+-...++..+++++ .++
T Consensus 143 ~~g~~I-v~assGNhG~AlA~aaa~~Gl~~~ivmp~~~~~~k~~~~~~~GAeVv~~v~ 199 (389)
T 1wkv_A 143 EKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPE 199 (389)
T ss_dssp CTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETT
T ss_pred hcCCEE-EEECCcHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEEcC
Confidence 566444 34444555566777778899855544333333444568999999999 666
No 324
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=20.76 E-value=1.1e+02 Score=24.19 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=30.7
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhh-ccce
Q 046637 51 KLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPM-AGAV 90 (301)
Q Consensus 51 ~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~-~G~~ 90 (301)
.+...+.+.|+.+++.|.++|..+.....+.+++.. .|..
T Consensus 213 ~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~ 253 (277)
T 3aay_A 213 ELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQ 253 (277)
T ss_dssp HHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCCC
Confidence 455556667888999999999998887777777764 7864
No 325
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=20.57 E-value=2e+02 Score=19.23 Aligned_cols=78 Identities=23% Similarity=0.320 Sum_probs=47.4
Q ss_pred EEEEEcCCCHHHHHHHHHhhhccceeeecCCC-CCHHHHHHHHHhcCceEEEEcCCchhhHHHHHHHhccccCCCCceEE
Q 046637 66 VVAALAPNVPAMYELHFGVPMAGAVLCTLNTR-HDSAMVSVLLRHSEAKIIFVDYQLLPIAQGAFEILSKTSAKLPLLVL 144 (301)
Q Consensus 66 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 144 (301)
++++++. .+.+ .+-..+|.-..+.... .-.+.+..++++-+..+|+.++...+.+.+..+...... ..|.++.
T Consensus 5 kiaVIgD--~dtv---~GFrLaGi~~~~v~~~ee~~~~~~~l~~~~digIIlIte~~a~~i~~~i~~~~~~~-~~P~Il~ 78 (109)
T 2d00_A 5 RMAVIAD--PETA---QGFRLAGLEGYGASSAEEAQSLLETLVERGGYALVAVDEALLPDPERAVERLMRGR-DLPVLLP 78 (109)
T ss_dssp CEEEEEC--HHHH---HHHHHTTSEEEECSSHHHHHHHHHHHHHHCCCSEEEEETTTCSCHHHHHHHHTTCC-CCCEEEE
T ss_pred EEEEEeC--HHHH---HHHHHcCCeEEEeCCHHHHHHHHHHHhhCCCeEEEEEeHHHHHhhHHHHHHHHhCC-CCeEEEE
Confidence 5778877 4444 3334455544444221 222456777777788899999888887776666553111 5677777
Q ss_pred ccCCC
Q 046637 145 VPECG 149 (301)
Q Consensus 145 ~~~~~ 149 (301)
+.+..
T Consensus 79 IPs~~ 83 (109)
T 2d00_A 79 IAGLK 83 (109)
T ss_dssp ESCGG
T ss_pred ECCCc
Confidence 76543
No 326
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=20.51 E-value=2.5e+02 Score=21.85 Aligned_cols=55 Identities=16% Similarity=0.024 Sum_probs=40.9
Q ss_pred HHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHH
Q 046637 18 SFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPA 76 (301)
Q Consensus 18 ~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~ 76 (301)
..+....+..|+...+.+.| ..-++.++.+.+...+..|.+.|++ ..++.-|+..
T Consensus 14 tv~~~l~~~lP~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d----~iviaCNTa~ 74 (255)
T 2jfz_A 14 SVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIE----LLIVACNTAS 74 (255)
T ss_dssp HHHHHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHGGGCCS----CEEECCHHHH
T ss_pred HHHHHHHHHCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCchhh
Confidence 45666667789887777644 3568999999999999999987764 5556666554
No 327
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=20.48 E-value=84 Score=25.47 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=32.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCC----CCHHHHHHHHHhc-----CceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTR----HDSAMVSVLLRHS-----EAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~-----~~~~vi~~ 118 (301)
+++||.|.+..+.....+-..-++...|+.++++ .. ...+++...++.. +.++|+..
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~ 139 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIE 139 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEE
T ss_pred cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEe
Confidence 4689998886554222111011344567777766 32 3678888877642 56777664
No 328
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=20.45 E-value=2.3e+02 Score=23.27 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=36.9
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCCCCCHHHHHHHHHhc-----CceEEEEcC
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNTRHDSAMVSVLLRHS-----EAKIIFVDY 119 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~-----~~~~vi~~~ 119 (301)
.++||.|.+-.+....+. -++...|+.+++++. ...+++...++.. ++++|++..
T Consensus 124 ~~~gd~v~~~~~~~~~~~---~~~~~~g~~~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 124 LGPEDAIISDELNHASII---DGIRLCKAQRYRYKN-NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CCTTCEEEEETTCCHHHH---HHHHSCCSEEEEECT-TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred cCCCCEEEECCcccHHHH---HHHHHcCCceeEeCC-CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 468888888777665543 345567776666643 4557888888764 677777764
No 329
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=20.34 E-value=1.3e+02 Score=23.87 Aligned_cols=52 Identities=10% Similarity=0.062 Sum_probs=39.6
Q ss_pred eeeHHHHHH-----HHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHhhhccce
Q 046637 39 QYTWKETHQ-----RCVKLASGLAHLGISPGDVVAALAPNVPAMYELHFGVPMAGAV 90 (301)
Q Consensus 39 ~~Ty~el~~-----~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 90 (301)
.+.|.++.. ....+...+.+.++.+++.|.++|..+.....+..++...|..
T Consensus 200 nip~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~~ 256 (280)
T 1urh_A 200 NVPWTELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVP 256 (280)
T ss_dssp ECCGGGGBSSSSBCCHHHHHHHHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTCS
T ss_pred EeeHHHhhcCCccCCHHHHHHHHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCCC
Confidence 566777654 1235556677778889999999999998888888888888974
No 330
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.30 E-value=2.2e+02 Score=23.50 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=28.8
Q ss_pred CCCCCEEEEEcCCCHHHHHHHHHhhhcccee--eecCC----CCCHHHHHHHHHhcCceEEEEc
Q 046637 61 ISPGDVVAALAPNVPAMYELHFGVPMAGAVL--CTLNT----RHDSAMVSVLLRHSEAKIIFVD 118 (301)
Q Consensus 61 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~--v~l~~----~~~~~~l~~~l~~~~~~~vi~~ 118 (301)
.++||.|.+..+....+.- ++...|+.+ +++++ ....+++...++. ++++|+..
T Consensus 122 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 181 (389)
T 1o4s_A 122 LDPGDEVIVFSPVWVSYIP---QIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-KTKAVLIN 181 (389)
T ss_dssp CCTTCEEEEEESCCTTHHH---HHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-TEEEEEEE
T ss_pred CCCCCEEEEcCCCchhHHH---HHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-CceEEEEc
Confidence 4567777777666544332 223445544 34433 1256677766643 55655543
No 331
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=20.23 E-value=1.4e+02 Score=26.10 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=17.3
Q ss_pred CCCHHHHHHHHHhcCceEEEEcC
Q 046637 97 RHDSAMVSVLLRHSEAKIIFVDY 119 (301)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~vi~~~ 119 (301)
....+++...++..++++|++..
T Consensus 189 ~iD~d~le~~l~~~~~klIi~~~ 211 (490)
T 2a7v_A 189 LIDYNQLALTARLFRPRLIIAGT 211 (490)
T ss_dssp SBCHHHHHHHHHHHCCSEEEECC
T ss_pred CcCHHHHHHHHhhcCCcEEEEcC
Confidence 35778888888777788887754
No 332
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=20.20 E-value=3.8e+02 Score=22.32 Aligned_cols=55 Identities=20% Similarity=0.218 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCCHHHHHHHHHhhhccceeeecCC------CCCHHHHHHHHHh-----cCceEEEEc
Q 046637 62 SPGDVVAALAPNVPAMYELHFGVPMAGAVLCTLNT------RHDSAMVSVLLRH-----SEAKIIFVD 118 (301)
Q Consensus 62 ~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~------~~~~~~l~~~l~~-----~~~~~vi~~ 118 (301)
++||.|.+..+.-..+... .+...|+.+++++. ....+++...++. .++++|+..
T Consensus 130 ~~gd~Vl~~~p~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 195 (428)
T 1iay_A 130 DPGDAFLVPSPYYPAFNRD--LRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILT 195 (428)
T ss_dssp CTTCEEEEESSCCTTHHHH--TTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCeEEEccCCCcchHHH--HHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEc
Confidence 5789888887765544321 12346765555543 2367888888865 256765543
No 333
>2gcx_A FEOA, ferrous iron transport protein A; NMR {Klebsiella pneumoniae} SCOP: b.34.1.2
Probab=20.17 E-value=62 Score=19.76 Aligned_cols=23 Identities=22% Similarity=0.326 Sum_probs=18.3
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcC
Q 046637 50 VKLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 50 ~~la~~L~~~gv~~g~~V~i~~~ 72 (301)
..+.+.|.++|+.+|..|-+...
T Consensus 20 ~~~~~rL~~lGl~pG~~v~v~~~ 42 (75)
T 2gcx_A 20 PAYRQKLLSLGMLPGSSFHVVRV 42 (75)
T ss_dssp HHHHHHHTTTTCCSSEEEEECCC
T ss_pred HHHHHHHHHCCCCCCCEEEEEEe
Confidence 34667899999999998887644
No 334
>1kkl_H Phosphocarrier protein HPR; phosphorylation, protein kinase, bacteria, protein/protein interaction, transferase; 2.80A {Bacillus subtilis} SCOP: d.94.1.1 PDB: 1kkm_H*
Probab=20.15 E-value=2e+02 Score=18.98 Aligned_cols=49 Identities=24% Similarity=0.386 Sum_probs=38.0
Q ss_pred HHHHHHHHhhhcCCccEEEECCeeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Q 046637 16 PISFLERSAVVYRDRPSVVYGDVQYTWKETHQRCVKLASGLAHLGISPGDVVAALAP 72 (301)
Q Consensus 16 ~~~~l~~~~~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~ 72 (301)
....|-+.+++++-.+-+..+++.+.-+-+. ++..+|+++|+.|-|...
T Consensus 30 PAa~~v~~A~~f~s~I~i~~~~~~vdAKSIm--------~lmsLg~~~G~~i~i~a~ 78 (100)
T 1kkl_H 30 PATVLVQTASKYDADVNLEYNGKTVNLKSIM--------GVMSLGIAKGAEITISAS 78 (100)
T ss_dssp HHHHHHHHHHTCSSEEEEEETTEEEETTCHH--------HHHHTCCCTTCEEEEEEE
T ss_pred HHHHHHHHHhhCCCeEEEEECCEEEecHhHH--------HHhcCCCCCCCEEEEEEe
Confidence 3467888899999999998888877765443 366889999998887653
No 335
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=20.05 E-value=3.4e+02 Score=21.70 Aligned_cols=58 Identities=16% Similarity=0.107 Sum_probs=43.7
Q ss_pred HHHHHHHHhhhcCCccEEEECC------eeeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH
Q 046637 16 PISFLERSAVVYRDRPSVVYGD------VQYTWKETHQRCVKLASGLAHLGISPGDVVAALAPNVPAM 77 (301)
Q Consensus 16 ~~~~l~~~~~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~ 77 (301)
-.++++...+..|+...+.+.| ...++.++.+++...+..|.+.|++ ..++.-|+.-.
T Consensus 36 gltv~~~i~~~~P~~~~iy~~D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~d----~IVIACNTas~ 99 (290)
T 2vvt_A 36 GLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLLKKRIK----MLVIACNTATA 99 (290)
T ss_dssp THHHHHHHHHHCTTSCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCS----EEEECCHHHHH
T ss_pred HHHHHHHHHHHCCCccEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHCCCC----EEEEeCcchhH
Confidence 3577788888889887776544 2468999999999999999887654 66677776653
Done!