BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046639
(331 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 142/268 (52%), Gaps = 22/268 (8%)
Query: 16 QFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SF 74
Q S EL A++NFS N +G+GG VYKG L + ++VAVK + ++ + F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG-TLVAVKRLKEERXQGGELQF 82
Query: 75 AAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQLR 131
E + HRNL+++ C + + +V+ YM N ++ LR+ S L
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 132 FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
+ +R IA+ + + Y H HC P I+H D+K +NILLD++ A VGD GLAK L Y+
Sbjct: 138 W-PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 195
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMF-- 249
++G +G++APEY K+S DV+ +G++LLE+ T +R D
Sbjct: 196 DXHVXXA------VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 249
Query: 250 -NEGLTLHEFVKMALPDKVME-IVDPSL 275
++ + L ++VK L +K +E +VD L
Sbjct: 250 NDDDVMLLDWVKGLLKEKKLEALVDVDL 277
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 22/268 (8%)
Query: 16 QFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SF 74
Q S EL A++NF N +G+GG VYKG L + +VAVK + ++ + F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADG-XLVAVKRLKEERTQGGELQF 74
Query: 75 AAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQLR 131
E + HRNL+++ C + + +V+ YM N ++ LR+ S L
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTE-----RLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 132 FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
+ +R IA+ + + Y H HC P I+H D+K +NILLD++ A VGD GLAK L Y+
Sbjct: 130 W-PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYK 187
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMF-- 249
++G +G++APEY K+S DV+ +G++LLE+ T +R D
Sbjct: 188 DXHVXXA------VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 250 -NEGLTLHEFVKMALPDKVME-IVDPSL 275
++ + L ++VK L +K +E +VD L
Sbjct: 242 NDDDVMLLDWVKGLLKEKKLEALVDVDL 269
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 30/329 (9%)
Query: 2 KPAHKDSNMLSMKQQFPMISY----AELSKATNNFSPANKIGQGGVSIVYKGILDESRSI 57
K + ++ LS P SY +L +ATNNF IG G VYKG+L + +
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG-AK 65
Query: 58 VAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNR 117
VA+K + + F E L RH +L+ +I C + ++++YM+N
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENG 120
Query: 118 NLEQWLRQSNGQLRFLT--QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
NL++ L S+ ++ QR+ I I + + Y H +I+H D+K NILLD++ V
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177
Query: 176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
+ D G++K GT + +KG +GY+ PEY + + + DVY+FG++L
Sbjct: 178 PKITDFGISK------KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
Query: 236 LEMFTRRRP-TDAMFNEGLTLHEF-VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVA 293
E+ R ++ E + L E+ V+ ++ +IVDP+L ++ + D
Sbjct: 232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD---- 287
Query: 294 VIGTGVTCXXXXXXXXXXXXDVVAKLRHA 322
T V C DV+ KL +A
Sbjct: 288 ---TAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 30/329 (9%)
Query: 2 KPAHKDSNMLSMKQQFPMISY----AELSKATNNFSPANKIGQGGVSIVYKGILDESRSI 57
K + ++ LS P SY +L +ATNNF IG G VYKG+L + +
Sbjct: 7 KATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG-AK 65
Query: 58 VAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNR 117
VA+K + + F E L RH +L+ +I C + ++++YM+N
Sbjct: 66 VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENG 120
Query: 118 NLEQWLRQSNGQLRFLT--QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
NL++ L S+ ++ QR+ I I + + Y H +I+H D+K NILLD++ V
Sbjct: 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177
Query: 176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
+ D G++K GT +KG +GY+ PEY + + + DVY+FG++L
Sbjct: 178 PKITDFGISK------KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL 231
Query: 236 LEMFTRRRP-TDAMFNEGLTLHEF-VKMALPDKVMEIVDPSLLLEVTANNYSWIEDCLVA 293
E+ R ++ E + L E+ V+ ++ +IVDP+L ++ + D
Sbjct: 232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGD---- 287
Query: 294 VIGTGVTCXXXXXXXXXXXXDVVAKLRHA 322
T V C DV+ KL +A
Sbjct: 288 ---TAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 38/241 (15%)
Query: 16 QFPMISYAELSKATNNFSP------ANKIGQGGVSIVYKGILDESRSIVAVK----VVNL 65
+F S+ EL TNNF NK+G+GG +VYKG ++ + VAVK +V++
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDI 68
Query: 66 KQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ 125
+E + F E + +H NL++++ S +G D +V+ YM N +L L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 123
Query: 126 SNGQLRF-LTQRVNIAIDVSFAIEYFH--HHCQPSIVHGDLKPSNILLDQDIVAHVGDLG 182
+G R IA + I + H HH +H D+K +NILLD+ A + D G
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFG 178
Query: 183 LAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMF 239
LA+ A+E + ++ IVG Y+APE + + + D+Y+FG++LLE+
Sbjct: 179 LAR---------ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
Query: 240 T 240
T
Sbjct: 229 T 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 38/241 (15%)
Query: 16 QFPMISYAELSKATNNFSP------ANKIGQGGVSIVYKGILDESRSIVAVK----VVNL 65
+F S+ EL TNNF NK+G+GG +VYKG ++ + VAVK +V++
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDI 68
Query: 66 KQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ 125
+E + F E + +H NL++++ S +G D +V+ YM N +L L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 123
Query: 126 SNGQLRF-LTQRVNIAIDVSFAIEYFH--HHCQPSIVHGDLKPSNILLDQDIVAHVGDLG 182
+G R IA + I + H HH +H D+K +NILLD+ A + D G
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFG 178
Query: 183 LAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMF 239
LA+ A+E + ++ IVG Y+APE + + + D+Y+FG++LLE+
Sbjct: 179 LAR---------ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 228
Query: 240 T 240
T
Sbjct: 229 T 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 119/241 (49%), Gaps = 38/241 (15%)
Query: 16 QFPMISYAELSKATNNFSP------ANKIGQGGVSIVYKGILDESRSIVAVK----VVNL 65
+F S+ EL TNNF NK+G+GG +VYKG ++ + VAVK +V++
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDI 62
Query: 66 KQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ 125
+E + F E + +H NL++++ S +G D +V+ YM N +L L
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSS----DGDDL-CLVYVYMPNGSLLDRLSC 117
Query: 126 SNGQLRF-LTQRVNIAIDVSFAIEYFH--HHCQPSIVHGDLKPSNILLDQDIVAHVGDLG 182
+G R IA + I + H HH +H D+K +NILLD+ A + D G
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFG 172
Query: 183 LAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMF 239
LA+ A+E + + IVG Y+APE + + + D+Y+FG++LLE+
Sbjct: 173 LAR---------ASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEII 222
Query: 240 T 240
T
Sbjct: 223 T 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 38/241 (15%)
Query: 16 QFPMISYAELSKATNNFSP------ANKIGQGGVSIVYKGILDESRSIVAVK----VVNL 65
+F S+ EL TNNF NK G+GG +VYKG ++ + VAVK +V++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDI 59
Query: 66 KQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ 125
+E + F E +H NL++++ S +G D +V+ Y N +L L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSS----DGDDL-CLVYVYXPNGSLLDRLSC 114
Query: 126 SNGQLRF-LTQRVNIAIDVSFAIEYFH--HHCQPSIVHGDLKPSNILLDQDIVAHVGDLG 182
+G R IA + I + H HH +H D+K +NILLD+ A + D G
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFG 169
Query: 183 LAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMF 239
LA+ A+E + + IVG Y APE + + + D+Y+FG++LLE+
Sbjct: 170 LAR---------ASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEII 219
Query: 240 T 240
T
Sbjct: 220 T 220
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 15 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 73 SEEPI------XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 123
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-XTARQGAKFPIK------WTAPEA 176
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-XTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 18 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 76 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 126
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 179
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 214
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ IRH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 22 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V+++ ++ + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM--- 130
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-WTARQGAKFPIK------WTAPEA 183
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 14 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 72 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 122
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 175
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 249 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 299
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 352
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 16 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 74 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 124
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 177
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 249 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 299
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 352
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 22 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V+++ ++ + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM--- 130
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 183
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 274 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 332 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 382
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 435
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 470
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 18 PMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAE 77
P +Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 60
Query: 78 CNALRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR 136
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQEVNAVVL 114
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
+ +A +S A+EY + + +H DL N L+ ++ + V D GL++ + G
Sbjct: 115 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 164
Query: 197 ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+T + K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 165 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 107/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 249 SEEPI------YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--- 299
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 352
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 133
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL +NIL+ +++V V D GLA+ + E TA + A I+ + APE
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIK------WTAPEA 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 187 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 221
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 18 PMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAE 77
P +Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKE 63
Query: 78 CNALRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR 136
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q
Sbjct: 64 AAVMKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
+ +A +S A+EY + + +H DL N L+ ++ + V D GL++ + G
Sbjct: 118 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 167
Query: 197 ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+T + K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 75
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 76 CTREPPF------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H DL N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTXTAHAGAKFPIKWTAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 67
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 171
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 67
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTX 171
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+GQG V+ G + + + VA+K + + +F E ++ +RH L+++ +
Sbjct: 192 KLGQGCFGEVWMGTWNGT-TRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L Q V++A ++ + Y
Sbjct: 250 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM--- 300
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ VH DL+ +NIL+ +++V V D GL + + E TA + A I+ + APE
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE-YTARQGAKFPIK------WTAPEA 353
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 388
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 67
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 121
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 171
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 75
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 76 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H DL N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTXTAHAGAKFPIKWTAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 64
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 119 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 168
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 169 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 67
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 171
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 64
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 119 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 168
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 63
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 118 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 167
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 168 TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 62
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 117 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 64
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 119 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 168
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 169 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 75
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 129
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 130 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 179
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 180 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 18/221 (8%)
Query: 21 SYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA 80
+Y + + + +K+G G VY+G+ + VAVK + E F E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAV 67
Query: 81 LRNIRHRNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++ I+H NL++++ +C+ F I+ E+M NL +LR+ N Q + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 121
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A +S A+EY + + +H DL N L+ ++ + V D GL++ + G +T
Sbjct: 122 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTY 171
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ K + + APE +K S+ DV+ FG+LL E+ T
Sbjct: 172 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 75
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 76 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H DL N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTFTAHAGAKFPIKWTAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 180 ESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 110/229 (48%), Gaps = 25/229 (10%)
Query: 38 IGQGGVSIVYKGILDESRS----IVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKI 92
IG G VYKG+L S VA+K + E R F E + H N+I++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ S + I+ EYM+N L+++LR+ +G+ L Q V + ++ ++Y +
Sbjct: 112 EGVISK-----YKPMMIITEYMENGALDKFLREKDGEFSVL-QLVGMLRGIAAGMKYLAN 165
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+ VH DL NIL++ ++V V D GL++ L +P T+ I I+ +
Sbjct: 166 M---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIR----WT 217
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEGLTLHEFVK 260
APE K + + DV++FGI++ E+ T RP + N HE +K
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVMK 261
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 96
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C+ E + IV EYM NL +LR+ N + + +A +S A+EY +
Sbjct: 97 CT---LEPPFY--IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---K 148
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL N L+ ++ V V D GL++ + G +T + K + + APE
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAPE 201
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
+ S+ DV+ FG+LL E+ T
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 32 FSPANKIGQGGVSIVY---KGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN 88
+ +K+G GG+S VY IL+ +I A+ + +++E + F E + + H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI- 147
++ +I + E D +V EY++ L +++ +S+G L V+ AI+ + I
Sbjct: 73 IVSMIDVD-----EEDDCYYLVMEYIEGPTLSEYI-ESHGPLS-----VDTAINFTNQIL 121
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA-SNSIEIK 206
+ H IVH D+KP NIL+D + + D G+AK L +ET+ + + +
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--------SETSLTQTNHVL 173
Query: 207 GIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G V Y +PE G D+Y+ GI+L EM P
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 284
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 285 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 335
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H +L N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAP 388
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 389 ESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 323
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 324 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 374
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H +L N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAP 427
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 428 ESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+K+G G VY+G+ + VAVK + E F E ++ I+H NL++++ +
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 281
Query: 96 CS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
C+ F I+ E+M NL +LR+ N Q + +A +S A+EY
Sbjct: 282 CTREPPF------YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 332
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ + +H +L N L+ ++ + V D GL++ + G +T + K + + AP
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAP 385
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +K S+ DV+ FG+LL E+ T
Sbjct: 386 ESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V G D + VAVK + K +++F AE + + +RH NL++++ +
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
++ +G + IV EYM +L +LR + + ++DV A+EY + +
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 122
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
VH DL N+L+ +D VA V D GL K E +S K V + APE
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWTAPEAL 171
Query: 218 MGSKASVSGDVYNFGILLLEMFTRRR---PTDAMFNEGLTLHEFVKMALPDKVMEIVDPS 274
K S DV++FGILL E+++ R P + + + + KM PD P
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-----PP 226
Query: 275 LLLEVTANNY 284
+ EV N +
Sbjct: 227 AVYEVMKNCW 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 22/206 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V G D + VAVK + K +++F AE + + +RH NL++++ +
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
++ +G + IV EYM +L +LR + + ++DV A+EY + +
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 309
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
VH DL N+L+ +D VA V D GL K E +S K V + APE
Sbjct: 310 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWTAPEAL 358
Query: 218 MGSKASVSGDVYNFGILLLEMFTRRR 243
K S DV++FGILL E+++ R
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V G D + VAVK + K +++F AE + + +RH NL++++ +
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
++ +G + IV EYM +L +LR + + ++DV A+EY + +
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 137
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
VH DL N+L+ +D VA V D GL K E +S K V + APE
Sbjct: 138 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWTAPEAL 186
Query: 218 MGSKASVSGDVYNFGILLLEMFTRRR---PTDAMFNEGLTLHEFVKMALPDKVMEIVDPS 274
K S DV++FGILL E+++ R P + + + + KM PD P
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-----PP 241
Query: 275 LLLEVTANNY 284
+ EV N +
Sbjct: 242 AVYEVMKNCW 251
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNLIKIIT 94
KIG G V++ + S VAVK++ + A R F E ++ +RH N++ +
Sbjct: 44 KIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF-LTQRVNIAIDVSFAIEYFHHH 153
+ +IV EY+ +L + L +S + + +R+++A DV+ + Y H+
Sbjct: 102 AVTQPPN-----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
P IVH +LK N+L+D+ V D GL++ A T +S G ++A
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--------KASTFLSSKSAAGTPEWMA 207
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE ++ DVY+FG++L E+ T ++P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 24/266 (9%)
Query: 8 SNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ 67
S+M + K Q P E ++G G V+ G + + VAVK +LKQ
Sbjct: 2 SHMQTQKPQKPWWE-DEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVK--SLKQ 57
Query: 68 KEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS 126
S +F AE N ++ ++H+ L+++ + + I+ EYM+N +L +L+
Sbjct: 58 GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEYMENGSLVDFLKTP 111
Query: 127 NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
+G + + +++A ++ + + + +H DL+ +NIL+ + + D GLA+
Sbjct: 112 SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL 168
Query: 187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRR-PT 245
+ E TA E A I+ + APE ++ DV++FGILL E+ T R P
Sbjct: 169 IEDNE-YTAREGAKFPIK------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
Query: 246 DAMFNEGL--TLHEFVKMALPDKVME 269
M N + L +M PD E
Sbjct: 222 PGMTNPEVIQNLERGYRMVRPDNCPE 247
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
++G G V+ G + + VA+K + + SF E ++ ++H L+++ +
Sbjct: 16 RLGNGQFGEVWMGTWN-GNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S IV EYM +L +L+ G+ L V++A V+ + Y
Sbjct: 74 SEEPI------YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM--- 124
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+ +H DL+ +NIL+ ++ + D GLA+ + E TA + A I+ + APE
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLARLIEDNE-XTARQGAKFPIK------WTAPEA 177
Query: 217 GMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFN 250
+ + ++ DV++FGILL E+ T+ R P M N
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 30/250 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V G D + VAVK + K +++F AE + + +RH NL++++ +
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
++ +G + IV EYM +L +LR + + ++DV A+EY + +
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---N 128
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
VH DL N+L+ +D VA V D GL K E +S K V + APE
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWTAPEAL 177
Query: 218 MGSKASVSGDVYNFGILLLEMFTRRR---PTDAMFNEGLTLHEFVKMALPDKVMEIVDPS 274
+ S DV++FGILL E+++ R P + + + + KM PD P
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGC-----PP 232
Query: 275 LLLEVTANNY 284
+ EV N +
Sbjct: 233 AVYEVMKNCW 242
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 19/211 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNLIKIIT 94
KIG G V++ + S VAVK++ + A R F E ++ +RH N++ +
Sbjct: 44 KIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF-LTQRVNIAIDVSFAIEYFHHH 153
+ +IV EY+ +L + L +S + + +R+++A DV+ + Y H+
Sbjct: 102 AVTQPPN-----LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
P IVH DLK N+L+D+ V D GL++ A S G ++A
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--------KASXFLXSKXAAGTPEWMA 207
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE ++ DVY+FG++L E+ T ++P
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 114/238 (47%), Gaps = 23/238 (9%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIIT 94
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++
Sbjct: 19 ERLGAGQAGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ + I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 76 VVTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + AP
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE-XTAREGAKFPIK------WTAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
E ++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 28 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 85 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 136
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 137 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 188
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 245
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 29 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 86 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 137
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 138 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 189
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 246
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 26 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 83 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 134
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 186
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 243
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 20 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 77 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 128
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 180
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 22 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 79 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 130
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 131 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 182
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 239
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 21 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 78 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 129
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 130 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 181
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 238
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 20 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 77 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 128
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIK------WTAPE 180
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 25 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 82 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 133
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 134 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK------WTAPE 185
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 242
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 26 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 83 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 134
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 135 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK------WTAPE 186
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 17 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 72
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L S + + + ++IA + ++Y
Sbjct: 73 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQTARGMDY 123
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D +GD GLA + E S SI
Sbjct: 124 LH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 175
Query: 210 GYVAPE---YGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFN 250
++APE + S DVY FGI+L E+ T + P + N
Sbjct: 176 -WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+G +V K VA+K ++ + ++F E L + H N++K+ C
Sbjct: 16 VGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC- 70
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLT--QRVNIAIDVSFAIEYFHHHCQ 155
+ +V EY + +L L + L + T ++ + S + Y H
Sbjct: 71 ------LNPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+++H DLKP N+LL VA L + F GTA + ++ KG ++APE
Sbjct: 124 KALIHRDLKPPNLLL----VAGGTVLKICDF------GTACDIQTHMTNNKGSAAWMAPE 173
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
GS S DV+++GI+L E+ TRR+P D
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 20 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 77 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 128
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 129 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK------WTAPE 180
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 237
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 15 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 72 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 123
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 124 -NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK------WTAPE 175
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 232
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+G +V K VA+K ++ + ++F E L + H N++K+ C
Sbjct: 17 VGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC- 71
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLT--QRVNIAIDVSFAIEYFHHHCQ 155
+ +V EY + +L L + L + T ++ + S + Y H
Sbjct: 72 ------LNPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+++H DLKP N+LL VA L + F GTA + ++ KG ++APE
Sbjct: 125 KALIHRDLKPPNLLL----VAGGTVLKICDF------GTACDIQTHMTNNKGSAAWMAPE 174
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
GS S DV+++GI+L E+ TRR+P D
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 18 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 73
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 74 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 124
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 125 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 176
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 177 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 15 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 70
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 71 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 121
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 122 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 173
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 174 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 13 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 68
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 69 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 119
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 171
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 172 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 18 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 73
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 74 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 124
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 125 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 176
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 177 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 13 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ ++ AIV ++ + +L L + + + ++IA + ++Y H
Sbjct: 70 MGYSTAPQL------AIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDYLH- 121
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
SI+H DLK +NI L +D+ +GD GLA + E S SI ++
Sbjct: 122 --AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL------WM 173
Query: 213 APEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
APE M K S DVY FGI+L E+ T + P + N
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 40 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 95
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 96 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 146
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 147 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 198
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 199 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 29 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 84
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L S + + + ++IA + ++Y
Sbjct: 85 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQTARGMDY 135
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D +GD GLA + E S SI
Sbjct: 136 LH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----- 187
Query: 210 GYVAPE---YGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFN 250
++APE + S DVY FGI+L E+ T + P + N
Sbjct: 188 -WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 41 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 96
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 97 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 147
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H SI+H DLK +NI L +D+ +GD GLA + E S SI
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----- 199
Query: 210 GYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 200 -WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 29 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ ++ AIV ++ + +L L S + + + ++IA + ++Y H
Sbjct: 86 MGYSTAPQL------AIVTQWCEGSSLYHHLHASETKFE-MKKLIDIARQTARGMDYLH- 137
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE-IKGIVGY 211
SI+H DLK +NI L +D +GD GLA + + S+ E + G + +
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT-------EKSRWSGSHQFEQLSGSILW 188
Query: 212 VAPE---YGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+APE + S DVY FGI+L E+ T + P
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 13 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 68
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 69 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 119
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE-IKGI 208
H SI+H DLK +NI L +D+ +GD GLA + + S+ E + G
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-------EKSRWSGSHQFEQLSGS 169
Query: 209 VGYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFN 250
+ ++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 33 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 88
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 89 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 139
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE-IKGI 208
H SI+H DLK +NI L +D+ +GD GLA + + S+ E + G
Sbjct: 140 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-------EKSRWSGSHQFEQLSGS 189
Query: 209 VGYVAPEY-GMGSK--ASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
+ ++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFE 112
VA+K + E R F +E + + H N+I + EG K+ I+ E
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL---------EGVVTKSTPVMIITE 114
Query: 113 YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ 172
+M+N +L+ +LRQ++GQ + Q V + ++ ++Y + VH DL NIL++
Sbjct: 115 FMENGSLDSFLRQNDGQFTVI-QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNS 170
Query: 173 DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFG 232
++V V D GL++FL E T+ T ++++ K + + APE K + + DV+++G
Sbjct: 171 NLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 233 ILLLEMFTR-RRPTDAMFNE 251
I++ E+ + RP M N+
Sbjct: 228 IVMWEVMSYGERPYWDMTNQ 247
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLK--QKEASRSFAAECNALRNIRHRNLIKI 92
+IG G VYKG + VAVK++N+ + ++F E LR RH N++
Sbjct: 41 GQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 96
Query: 93 ITICSSIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
F G+ K AIV ++ + +L L + + + ++IA + ++Y
Sbjct: 97 --------FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI-KLIDIARQTAQGMDY 147
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE-IKGI 208
H SI+H DLK +NI L +D+ +GD GLA + + S+ E + G
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-------EKSRWSGSHQFEQLSGS 197
Query: 209 VGYVAPEY-GMGSKA--SVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
+ ++APE M K S DVY FGI+L E+ T + P + N
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 33/228 (14%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRN 88
++G G +V +KG D VAVK++ KE S S F E + + H
Sbjct: 14 KELGSGQFGVVKLGKWKGQYD-----VAVKMI----KEGSMSEDEFFQEAQTMMKLSHPK 64
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
L+K +CS ++ + IV EY+ N L +LR S+G+ +Q + + DV +
Sbjct: 65 LVKFYGVCSK-EYPIY----IVTEYISNGCLLNYLR-SHGKGLEPSQLLEMCYDVCEGMA 118
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
+ H +H DL N L+D+D+ V D G+ +++ + +S+ K
Sbjct: 119 FLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-------DQYVSSVGTKFP 168
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEGLTL 255
V + APE K S DV+ FGIL+ E+F+ + P D N + L
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 23/237 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITI 95
++G G V+ G + + VAVK +LKQ S +F AE N ++ ++H+ L+++ +
Sbjct: 16 RLGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ EYM+N +L +L+ +G + + +++A ++ + +
Sbjct: 73 VTQEPI------YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-- 124
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H +L+ +NIL+ + + D GLA+ + E TA E A I+ + APE
Sbjct: 125 -NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIK------WTAPE 176
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL E+ T R P M N + L +M PD E
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE 233
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 76 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 129
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 183
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ G LR Q+ ID ++Y
Sbjct: 81 KGVCYSA---GRRNLKLIMEYL-----------PYGSLRDYLQKHKERIDHIKLLQYTSQ 126
Query: 153 HCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
C+ +H DL NIL++ + +GD GL K L + + S
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--- 183
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE SK SV+ DV++FG++L E+FT
Sbjct: 184 --PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ G LR Q+ ID ++Y
Sbjct: 80 KGVCYSA---GRRNLKLIMEYL-----------PYGSLRDYLQKHKERIDHIKLLQYTSQ 125
Query: 153 HCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
C+ +H DL NIL++ + +GD GL K L + + S
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--- 182
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE SK SV+ DV++FG++L E+FT
Sbjct: 183 --PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 74 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL- 128
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFW 181
Query: 212 VAPEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 182 YAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 83 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 136
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 190
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 82 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 135
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 189
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ G LR Q+ ID ++Y
Sbjct: 77 KGVCYSA---GRRNLKLIMEYL-----------PYGSLRDYLQKHKERIDHIKLLQYTSQ 122
Query: 153 HCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
C+ +H DL NIL++ + +GD GL K L + + S
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES--- 179
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE SK SV+ DV++FG++L E+FT
Sbjct: 180 --PIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 16/209 (7%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 107 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL- 161
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFW 214
Query: 212 VAPEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 215 YAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 77 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 130
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 184
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 77 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 130
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK-------FLFGYEPGTAAETASNSIEI 205
+H DL NIL++ + +GD GL K F EPG +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP--------- 180
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE SK SV+ DV++FG++L E+FT
Sbjct: 181 ---IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 95 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 148
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 202
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 84 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 137
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 191
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 95 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 148
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 202
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ E++ +L ++L++ ++ + + + + +EY
Sbjct: 80 KGVCYSA---GRRNLKLIMEFLPYGSLREYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 133
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 187
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIR 85
AT+ + P +IG G VYK S VA+K V + E + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 86 ---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
H N+++++ +C++ + +VFE++ +++L +L ++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+++ H +C IVH DLKP NIL+ + D GLA+ ++ Y+ A +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALAPVVVT-- 174
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ Y APE + S + D+++ G + EMF RR+P
Sbjct: 175 ------LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALRNIRH 86
+++ F K+G G + VYKG+ + VA+K V L +E + S A E + ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWL--RQSNGQLRFLTQRVNIAIDVS 144
N++++ + + + +VFE+M N +L++++ R R L +N+
Sbjct: 63 ENIVRLYDVIHTE-----NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGL--ELNLVKYFQ 114
Query: 145 FAIEYFHHHCQPS-IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ + C + I+H DLKP N+L+++ +GD GLA+ G T S+ +
Sbjct: 115 WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-----GIPVNTFSSEV 169
Query: 204 EIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFT 240
+ Y AP+ MGS+ S S D+++ G +L EM T
Sbjct: 170 V---TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GLA+ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+ +IG G VYKG ++ +KVV+ E ++F E LR RH N++ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ D AIV ++ + +L + L + + Q ++IA + ++Y H
Sbjct: 100 YMTK------DNLAIVTQWCEGSSLYKHLHVQETKFQMF-QLIDIARQTAQGMDYLH--- 149
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+I+H D+K +NI L + + +GD GLA + E + G V ++AP
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT------GSVLWMAP 203
Query: 215 E---YGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFN 250
E + S DVY++GI+L E+ T P + N
Sbjct: 204 EVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITI 95
++G GG V + I ++ VA+K + +R + E ++ + H N++ +
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 96 CSSID-FEGFDFKAIVFEYMQNRNLEQWLRQ-------SNGQLRFLTQRVNIAIDVSFAI 147
+ D + EY + +L ++L Q G +R L D+S A+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS------DISSAL 134
Query: 148 EYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
Y H + I+H DLKP NI+L Q ++ + DLG AK L E T E
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT---------E 182
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G + Y+APE K +V+ D ++FG L E T RP
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 30/220 (13%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITI 95
++G GG V + I ++ VA+K + +R + E ++ + H N++ +
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 96 CSSID-FEGFDFKAIVFEYMQNRNLEQWLRQ-------SNGQLRFLTQRVNIAIDVSFAI 147
+ D + EY + +L ++L Q G +R L D+S A+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS------DISSAL 135
Query: 148 EYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
Y H + I+H DLKP NI+L Q ++ + DLG AK L E T E
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT---------E 183
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G + Y+APE K +V+ D ++FG L E T RP
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 110/220 (50%), Gaps = 19/220 (8%)
Query: 38 IGQGGVSIVYKGILD---ESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKII 93
IG G V +G L + S VA+K + E R F +E + + H N+I++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 94 -TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ +S+ I+ E+M+N L+ +LR ++GQ + Q V + ++ + Y
Sbjct: 84 GVVTNSMPV------MILTEFMENGALDSFLRLNDGQFTVI-QLVGMLRGIASGMRYL-- 134
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+ S VH DL NIL++ ++V V D GL++FL E ++ T ++S+ K + +
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EENSSDPTETSSLGGKIPIRWT 190
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
APE K + + D +++GI++ E+ + RP M N+
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 38/207 (18%)
Query: 53 ESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFE 112
+ + +VAVK + A + F E L N++H +++K +C D +VFE
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD-----GDPLIMVFE 97
Query: 113 YMQNRNLEQWL---------------RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
YM++ +L ++L RQ+ G+L L+Q ++IA ++ + Y
Sbjct: 98 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG-LSQMLHIASQIASGMVYL---ASQH 153
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVA 213
VH DL N L+ +++ +GD G+++ ++ +++ + G + ++
Sbjct: 154 FVHRDLATRNCLVGANLLVKIGDFGMSRDVY----------STDYYRVGGHTMLPIRWMP 203
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFT 240
PE M K + DV++FG++L E+FT
Sbjct: 204 PESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L Q++ + + + + +EY
Sbjct: 80 KGVCYSA---GRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NIL++ + +GD GL K L + + S + +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PIFWY 187
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE SK SV+ DV++FG++L E+FT
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 24/235 (10%)
Query: 31 NFSPANKIGQGGVSIVYKG--ILDE-SRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR 87
NF KIG+G S VY+ +LD ++ V++ +L +A E + L+ + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV--NIAIDVSF 145
N+IK S I+ + IV E +L + ++ Q R + +R + +
Sbjct: 93 NVIKYYA--SFIEDNELN---IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
A+E+ H ++H D+KP+N+ + V +GDLGL +F ++ TA++S +
Sbjct: 148 ALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF------SSKTTAAHS--L 196
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
G Y++PE + + D+++ G LL EM + P + + + L+ K
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCK 248
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 19/220 (8%)
Query: 38 IGQGGVSIVYKGILD---ESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKII 93
IG G V +G L + S VA+K + E R F +E + + H N+I++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 94 -TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ +S+ I+ E+M+N L+ +LR ++GQ + Q V + ++ + Y
Sbjct: 82 GVVTNSMPV------MILTEFMENGALDSFLRLNDGQFTVI-QLVGMLRGIASGMRYLAE 134
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
S VH DL NIL++ ++V V D GL++FL E ++ T ++S+ K + +
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EENSSDPTYTSSLGGKIPIRWT 188
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
APE K + + D +++GI++ E+ + RP M N+
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEASRSFAAECNALRNIR 85
N S +G G V G L S+ ++V + LK ++ R F E + +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 86 HRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI 141
H N+I++ EG K+ IV EYM+N +L+ +LR+ + Q + Q V +
Sbjct: 93 HPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-QLVGMLR 142
Query: 142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASN 201
++ ++Y VH DL NIL++ ++V V D GL++ L +P A T
Sbjct: 143 GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGG 198
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNE 251
I I+ + +PE K + + DV+++GI+L E+ + RP M N+
Sbjct: 199 KIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEASRSFAAECNALRNIR 85
N S +G G V G L S+ ++V + LK ++ R F E + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 86 HRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI 141
H N+I++ EG K+ IV EYM+N +L+ +LR+ + Q + Q V +
Sbjct: 76 HPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI-QLVGMLR 125
Query: 142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASN 201
++ ++Y VH DL NIL++ ++V V D GL++ L +P A T
Sbjct: 126 GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGG 181
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNE 251
I I+ + +PE K + + DV+++GI+L E+ + RP M N+
Sbjct: 182 KIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE--ASRSFAAECNALRNIRH 86
+++F + +G+G +V + IVA+K + K A R+ E L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQ---NRNLEQWLRQSNGQLRFLTQRVNIAIDV 143
N+I I I FE F+ I+ E MQ +R + + + F+ Q +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR----- 123
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS- 202
A++ H +++H DLKPSN+L++ + V D GLA+ + + T S
Sbjct: 124 --AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 203 -IEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRR 242
+E Y APE + S K S + DV++ G +L E+F RR
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 105/222 (47%), Gaps = 19/222 (8%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIR 85
AT+ + P +IG G VYK S VA+K V + E + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 86 ---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
H N+++++ +C++ + +VFE++ +++L +L ++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+++ H +C IVH DLKP NIL+ + D GLA+ ++ Y + A +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSY------QMALDP 170
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ + + Y APE + S + D+++ G + EMF RR+P
Sbjct: 171 VVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALR 82
+E S +N IG+G VYKG LDE VAVKV + ++ +F E N R
Sbjct: 6 SEPSLDLDNLKLLELIGRGRYGAVYKGSLDER--PVAVKVFSFANRQ---NFINEKNIYR 60
Query: 83 N--IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIA 140
+ H N+ + I + +G +V EY N +L ++L +A
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW---VSSCRLA 117
Query: 141 IDVSFAIEYFH------HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
V+ + Y H H +P+I H DL N+L+ D + D GL+ L G
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGS-------KASVSGDVYNFGILLLEMFTR 241
E + +I G + Y+APE G+ A D+Y G++ E+F R
Sbjct: 178 PGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQN 116
VA+K + E R F +E + + H N+I++ + + IV EYM+N
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-----GRLAMIVTEYMEN 134
Query: 117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
+L+ +LR +GQ + Q V + V + Y VH DL N+L+D ++V
Sbjct: 135 GSLDTFLRTHDGQFTIM-QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D GL++ L +P A T I I+ + APE S + DV++FG+++
Sbjct: 191 KVSDFGLSRVLED-DPDAAXTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 237 EMFTR-RRPTDAMFNEGL--TLHEFVKMALP 264
E+ RP M N + ++ E ++ P
Sbjct: 246 EVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFE 112
VA+K + + E R F E + + H N+I + EG K+ IV E
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL---------EGVVTKSKPVMIVTE 103
Query: 113 YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ 172
YM+N +L+ +L++++GQ + Q V + +S ++Y VH DL NIL++
Sbjct: 104 YMENGSLDTFLKKNDGQFTVI-QLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINS 159
Query: 173 DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFG 232
++V V D GL++ L +P A T I I+ + APE K + + DV+++G
Sbjct: 160 NLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIR----WTAPEAIAFRKFTSASDVWSYG 214
Query: 233 ILLLEMFTR-RRPTDAMFNE 251
I++ E+ + RP M N+
Sbjct: 215 IVMWEVVSYGERPYWEMTNQ 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 89 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 139
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 140 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 196 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
Query: 247 AMFNE 251
M N+
Sbjct: 251 EMSNQ 255
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHR 87
N+ +G+G V + VA+K++N L + + E + LR +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 88 NLIKIITICSS-------IDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVN 138
++IK+ + S I++ G + +F+Y+ R+ EQ R RF Q ++
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEAR------RFFQQIIS 118
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+EY H H IVH DLKP N+LLD+ + + D GL+ + G +T
Sbjct: 119 -------AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKT 165
Query: 199 ASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTD 246
+ S Y APE G A DV++ G++L M RR P D
Sbjct: 166 SCGS------PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVV------NLKQKEASRSFAAECNALRNIRHRN 88
+IG+G V+ G L ++VAVK +LK K F E L+ H N
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPN 173
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
++++I +C+ IV E +Q + +LR +LR T + + D + +E
Sbjct: 174 IVRLIGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKT-LLQMVGDAAAGME 227
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
Y C +H DL N L+ + V + D G+++ E AS + +
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVXAASGGLR-QVP 278
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + APE + S DV++FGILL E F+
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHR 87
N+ +G+G V + VA+K++N L + + E + LR +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 88 NLIKIITICSS-------IDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVN 138
++IK+ + S I++ G + +F+Y+ R+ EQ R RF Q ++
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEAR------RFFQQIIS 114
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+EY H H IVH DLKP N+LLD+ + + D GL+ + G +T
Sbjct: 115 -------AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKT 161
Query: 199 ASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTD 246
+ S Y APE G A DV++ G++L M RR P D
Sbjct: 162 SCGS------PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHR 87
N+ +G+G V + VA+K++N L + + E + LR +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 88 NLIKIITICSS-------IDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVN 138
++IK+ + S I++ G + +F+Y+ R+ EQ R RF Q ++
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEAR------RFFQQIIS 123
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+EY H H IVH DLKP N+LLD+ + + D GL+ + G +T
Sbjct: 124 -------AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKT 170
Query: 199 ASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTD 246
+ S Y APE G A DV++ G++L M RR P D
Sbjct: 171 SCGS------PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 42/229 (18%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHR 87
N+ +G+G V + VA+K++N L + + E + LR +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 88 NLIKIITICSS-------IDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVN 138
++IK+ + S I++ G + +F+Y+ R+ EQ R RF Q ++
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEAR------RFFQQIIS 124
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+EY H H IVH DLKP N+LLD+ + + D GL+ + G +T
Sbjct: 125 -------AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKT 171
Query: 199 ASNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTD 246
+ S Y APE G A DV++ G++L M RR P D
Sbjct: 172 SCGS------PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV EYM+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEYMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL + L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQN 116
VA+K + E R F +E + + H N+I++ + + IV EYM+N
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR-----GRLAMIVTEYMEN 134
Query: 117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
+L+ +LR +GQ + Q V + V + Y VH DL N+L+D ++V
Sbjct: 135 GSLDTFLRTHDGQFTIM-QLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D GL++ L +P A T I I+ + APE S + DV++FG+++
Sbjct: 191 KVSDFGLSRVLED-DPDAAYTTTGGKIPIR----WTAPEAIAFRTFSSASDVWSFGVVMW 245
Query: 237 EMFTR-RRPTDAMFNEGL--TLHEFVKMALP 264
E+ RP M N + ++ E ++ P
Sbjct: 246 EVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 20 ISYAELSKATNNFSPANKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS-- 73
+ Y + + ++G G +V ++G D VA+K++ KE S S
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSED 64
Query: 74 -FAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF 132
F E + N+ H L+++ +C+ + F I+ EYM N L +LR+ + RF
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREM--RHRF 117
Query: 133 LTQRV-NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
TQ++ + DV A+EY +H DL N L++ V V D GL++++ E
Sbjct: 118 QTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++S+ K V + PE M SK S D++ FG+L+ E+++
Sbjct: 175 -------ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 22/200 (11%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFE 112
VA+K + E R F +E + + H N+I + EG K+ I+ E
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL---------EGVVTKSTPVMIITE 88
Query: 113 YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ 172
+M+N +L+ +LRQ++GQ + Q V + ++ ++Y + VH L NIL++
Sbjct: 89 FMENGSLDSFLRQNDGQFTVI-QLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNS 144
Query: 173 DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFG 232
++V V D GL++FL E T+ T ++++ K + + APE K + + DV+++G
Sbjct: 145 NLVCKVSDFGLSRFL---EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 201
Query: 233 ILLLEMFTR-RRPTDAMFNE 251
I++ E+ + RP M N+
Sbjct: 202 IVMWEVMSYGERPYWDMTNQ 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 72 RSFAAECNALRNIRHRNLIK---IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG 128
R F +E + + H N+I ++T C + I+ EYM+N +L+ +LR+++G
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 105
Query: 129 QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF 188
+ + Q V + + ++Y S VH DL NIL++ ++V V D G+++ L
Sbjct: 106 RFTVI-QLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 161
Query: 189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDA 247
+P A T I I+ + APE K + + DV+++GI++ E+ + RP
Sbjct: 162 D-DPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 216
Query: 248 MFNE 251
M N+
Sbjct: 217 MSNQ 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRNLIKI 92
+IG G +V+ G ++ VA+K + KE S S F E + + H L+++
Sbjct: 33 QEIGSGQFGLVHLGYW-LNKDKVAIKTI----KEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C E +VFE+M++ L +LR G T + + +DV + Y
Sbjct: 88 YGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAET-LLGMCLDVCEGMAYLEE 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
C ++H DL N L+ ++ V V D G+ +F+ + ++S K V +
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWA 191
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
+PE S+ S DV++FG+L+ E+F+
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 26/212 (12%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVV------NLKQKEASRSFAAECNALRNIRHRN 88
+IG+G V+ G L ++VAVK +LK K F E L+ H N
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPN 173
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
++++I +C+ IV E +Q + +LR +LR T + + D + +E
Sbjct: 174 IVRLIGVCTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKT-LLQMVGDAAAGME 227
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
Y C +H DL N L+ + V + D G+++ E AS + +
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVYAASGGLR-QVP 278
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + APE + S DV++FGILL E F+
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 27/226 (11%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE--ASRSFAAECNALRNIRH 86
+++F + +G+G +V + IVA+K + K A R+ E L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQ---NRNLEQWLRQSNGQLRFLTQRVNIAIDV 143
N+I I I FE F+ I+ E MQ +R + + + F+ Q +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR----- 123
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
A++ H +++H DLKPSN+L++ + V D GLA+ + +AA+ + +
Sbjct: 124 --AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII----DESAADNSEPTG 174
Query: 204 EIKGIVGYV------APEYGMGS-KASVSGDVYNFGILLLEMFTRR 242
+ G+ YV APE + S K S + DV++ G +L E+F RR
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNIRHRNLIKIITICSSIDFEGFDFKA 108
D + VAVK +LK + A E LRN+ H N++K IC+ +G +
Sbjct: 47 DNTGEQVAVK--SLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGNGIK 101
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
++ E++ + +L+++L ++ ++ L Q++ A+ + ++Y VH DL N+
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKIN-LKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNV 157
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
L++ + +GD GL K + T E + + V + APE M SK ++ DV
Sbjct: 158 LVESEHQVKIGDFGLTKAI-----ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDV 212
Query: 229 YNFGILLLEMFT 240
++FG+ L E+ T
Sbjct: 213 WSFGVTLHELLT 224
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRN 88
++G G +V ++G D VA+K++ KE S S F E + N+ H
Sbjct: 10 KELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEK 60
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV-NIAIDVSFAI 147
L+++ +C+ + F I+ EYM N L +LR+ RF TQ++ + DV A+
Sbjct: 61 LVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAM 113
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
EY +H DL N L++ V V D GL++++ E ++S+ K
Sbjct: 114 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------YTSSVGSKF 163
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + PE M SK S D++ FG+L+ E+++
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNIRHRNLIKIITICSSIDFEGFDFKA 108
D + VAVK +LK + A E LRN+ H N++K IC+ +G +
Sbjct: 35 DNTGEQVAVK--SLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGNGIK 89
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
++ E++ + +L+++L ++ ++ L Q++ A+ + ++Y VH DL N+
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKIN-LKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNV 145
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
L++ + +GD GL K + T E + + V + APE M SK ++ DV
Sbjct: 146 LVESEHQVKIGDFGLTKAI-----ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDV 200
Query: 229 YNFGILLLEMFT 240
++FG+ L E+ T
Sbjct: 201 WSFGVTLHELLT 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRN 88
++G G +V ++G D VA+K++ KE S S F E + N+ H
Sbjct: 14 KELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEK 64
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV-NIAIDVSFAI 147
L+++ +C+ + F I+ EYM N L +LR+ RF TQ++ + DV A+
Sbjct: 65 LVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAM 117
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
EY +H DL N L++ V V D GL++++ E ++S+ K
Sbjct: 118 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------YTSSVGSKF 167
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + PE M SK S D++ FG+L+ E+++
Sbjct: 168 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 20 ISYAELSKATNNFSPANKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS-- 73
+ Y + + ++G G +V ++G D VA+K++ KE S S
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSED 64
Query: 74 -FAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF 132
F E + N+ H L+++ +C+ + F I+ EYM N L +LR+ + RF
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREM--RHRF 117
Query: 133 LTQRV-NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
TQ++ + DV A+EY +H DL N L++ V V D GL++++ E
Sbjct: 118 QTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++S+ K V + PE M SK S D++ FG+L+ E+++
Sbjct: 175 -------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 72 RSFAAECNALRNIRHRNLIK---IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG 128
R F +E + + H N+I ++T C + I+ EYM+N +L+ +LR+++G
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 126
Query: 129 QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF 188
+ + Q V + + ++Y S VH DL NIL++ ++V V D G+++ L
Sbjct: 127 RFTVI-QLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDA 247
+P A T I I+ + APE K + + DV+++GI++ E+ + RP
Sbjct: 183 D-DPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 237
Query: 248 MFNE 251
M N+
Sbjct: 238 MSNQ 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 63 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 117 SFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 165
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 223
Query: 265 DKVM 268
D+V+
Sbjct: 224 DEVV 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 72 RSFAAECNALRNIRHRNLIK---IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG 128
R F +E + + H N+I ++T C + I+ EYM+N +L+ +LR+++G
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 111
Query: 129 QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF 188
+ + Q V + + ++Y S VH DL NIL++ ++V V D G+++ L
Sbjct: 112 RFTVI-QLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE 167
Query: 189 GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDA 247
+P A T I I+ + APE K + + DV+++GI++ E+ + RP
Sbjct: 168 D-DPEAAYTTRGGKIPIR----WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 222
Query: 248 MFNE 251
M N+
Sbjct: 223 MSNQ 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 37 KIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI 92
++G+G V Y + D + +VAVK + +E R F E L++++H N++K
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+C S G ++ EY+ +L +L++ ++ + + + + +EY
Sbjct: 78 KGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-KLLQYTSQICKGMEYL-- 131
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG-------YEPGTAAETASNSIEI 205
+H +L NIL++ + +GD GL K L EPG +
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP--------- 181
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE SK SV+ DV++FG++L E+FT
Sbjct: 182 ---IFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV- 166
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 222
Query: 263 LPDKVM 268
PD+V+
Sbjct: 223 TPDEVV 228
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 63 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 165
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 223
Query: 265 DKVM 268
D+V+
Sbjct: 224 DEVV 227
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 21/237 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
K+G G V+ ++ + VAVK + + +F AE N ++ ++H L+K+ +
Sbjct: 21 KKLGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ E+M +L +L+ G + L + ++ + ++ + + Q
Sbjct: 79 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 129
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ +V + D GLA+ + E TA E A I+ + APE
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIK------WTAPE 182
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL+E+ T R P M N + L +M P+ E
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 63 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 165
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 223
Query: 265 DKVM 268
D+V+
Sbjct: 224 DEVV 227
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 20 ISYAELSKATNNFSPANKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS-- 73
+ Y + + ++G G +V ++G D VA+K++ KE S S
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSED 55
Query: 74 -FAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF 132
F E + N+ H L+++ +C+ + F I+ EYM N L +LR+ RF
Sbjct: 56 EFIEEAKVMMNLSHEKLVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRH--RF 108
Query: 133 LTQRV-NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
TQ++ + DV A+EY +H DL N L++ V V D GL++++ E
Sbjct: 109 QTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++S+ K V + PE M SK S D++ FG+L+ E+++
Sbjct: 166 -------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRN 88
++G G +V ++G D VA+K++ KE S S F E + N+ H
Sbjct: 15 KELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV-NIAIDVSFAI 147
L+++ +C+ + F I+ EYM N L +LR+ RF TQ++ + DV A+
Sbjct: 66 LVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAM 118
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
EY +H DL N L++ V V D GL++++ E ++S+ K
Sbjct: 119 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------YTSSVGSKF 168
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + PE M SK S D++ FG+L+ E+++
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-QKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 67 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 169
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 227
Query: 265 DKVM 268
D+V+
Sbjct: 228 DEVV 231
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIR 85
AT+ + P +IG G VYK S VA+K V + E + E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 86 ---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
H N+++++ +C++ + +VFE++ +++L +L ++ ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+++ H +C IVH DLKP NIL+ + D GLA+ ++ Y+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ--------MAL 168
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ + Y APE + S + D+++ G + EMF RR+P
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + + + +VFE++ +++L++++ S L + + +
Sbjct: 70 NIVKLLDVIHTENK-----LYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 172
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 230
Query: 265 DKVM 268
D+V+
Sbjct: 231 DEVV 234
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + + + +VFE++ +++L++++ S L + + +
Sbjct: 63 NIVKLLDVIHTENK-----LYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 165
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 223
Query: 265 DKVM 268
D+V+
Sbjct: 224 DEVV 227
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + + + +VFE++ +++L++++ S L + + +
Sbjct: 70 NIVKLLDVIHTENK-----LYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 172
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 230
Query: 265 DKVM 268
D+V+
Sbjct: 231 DEVV 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE--ASRSFAAECNALRNIRH 86
+++F + +G+G +V + IVA+K + K A R+ E L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQ---NRNLEQWLRQSNGQLRFLTQRVNIAIDV 143
N+I I I FE F+ I+ E MQ +R + + + F+ Q +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR----- 123
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS- 202
A++ H +++H DLKPSN+L++ + V D GLA+ + + T S
Sbjct: 124 --AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 203 -IEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRR 242
E Y APE + S K S + DV++ G +L E+F RR
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHR 87
+ K+G+G +VYK + R IVA+K + L ++ A E + L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++ +I + S +VFE+M+ ++L++ L ++ L Q I I + +
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFME-KDLKKVLDENKTGL----QDSQIKIYLYQLL 129
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
H Q I+H DLKP N+L++ D + D GLA+ G + ++ +
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-----GIPVRSYTHEVV--- 181
Query: 208 IVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFT 240
+ Y AP+ MGSK S S D+++ G + EM T
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + EG +V YM++ +L ++R N ++ L + + V+ ++Y
Sbjct: 97 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 148
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
VH DL N +LD+ V D GLA+ ++ E + N K V +
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----XXSVHNKTGAKLPVKW 202
Query: 212 VAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+A E K + DV++FG+LL E+ TR P
Sbjct: 203 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHR 87
+ K+G+G +VYK + R IVA+K + L ++ A E + L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++ +I + S +VFE+M+ ++L++ L ++ L Q I I + +
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFME-KDLKKVLDENKTGL----QDSQIKIYLYQLL 129
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
H Q I+H DLKP N+L++ D + D GLA+ G + ++ +
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-----GIPVRSYTHEVV--- 181
Query: 208 IVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFT 240
+ Y AP+ MGSK S S D+++ G + EM T
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 21/237 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
K+G G V+ ++ + VAVK + + +F AE N ++ ++H L+K+ +
Sbjct: 194 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ E+M +L +L+ G + L + ++ + ++ + + Q
Sbjct: 252 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 302
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ +V + D GLA+ + E TA E A I+ + APE
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIK------WTAPE 355
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL+E+ T R P M N + L +M P+ E
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE 412
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 167
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 223
Query: 263 LPDKVM 268
PD+V+
Sbjct: 224 TPDEVV 229
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 117 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 167
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 223
Query: 263 LPDKVM 268
PD+V+
Sbjct: 224 TPDEVV 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 165
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 221
Query: 263 LPDKVM 268
PD+V+
Sbjct: 222 TPDEVV 227
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 165
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 221
Query: 263 LPDKVM 268
PD+V+
Sbjct: 222 TPDEVV 227
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 167
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 223
Query: 263 LPDKVM 268
PD+V+
Sbjct: 224 TPDEVV 229
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 65 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 119 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 169
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 170 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 225
Query: 263 LPDKVM 268
PD+V+
Sbjct: 226 TPDEVV 231
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG G +V+ G ++ VA+K + + + F E + + H L+++ +
Sbjct: 11 QEIGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C E +VFE+M++ L +LR G T + + +DV + Y C
Sbjct: 69 C----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAET-LLGMCLDVCEGMAYLEEAC- 121
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DL N L+ ++ V V D G+ +F+ + ++S K V + +PE
Sbjct: 122 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPE 172
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
S+ S DV++FG+L+ E+F+
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 165
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 221
Query: 263 LPDKVM 268
PD+V+
Sbjct: 222 TPDEVV 227
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 115 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 165
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 221
Query: 263 LPDKVM 268
PD+V+
Sbjct: 222 TPDEVV 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 64 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV--- 166
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 224
Query: 265 DKVM 268
D+V+
Sbjct: 225 DEVV 228
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 166
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 222
Query: 263 LPDKVM 268
PD+V+
Sbjct: 223 TPDEVV 228
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 116 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 166
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 222
Query: 263 LPDKVM 268
PD+V+
Sbjct: 223 TPDEVV 228
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG G +V+ G ++ VA+K + + + F E + + H L+++ +
Sbjct: 13 QEIGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C E +VFE+M++ L +LR G T + + +DV + Y C
Sbjct: 71 C----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAET-LLGMCLDVCEGMAYLEEAC- 123
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DL N L+ ++ V V D G+ +F+ + ++S K V + +PE
Sbjct: 124 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPE 174
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
S+ S DV++FG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 30 NNFSPANKIGQGGVSIV-----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI 84
+N ++G+G V Y ++ + +VAVK + A + F E L N+
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFL----------- 133
+H +++K +C EG D +VFEYM++ +L ++LR +
Sbjct: 73 QHEHIVKFYGVC----VEG-DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 134 TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+Q ++IA ++ + Y VH DL N L+ ++++ +GD G+++ ++
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY----- 179
Query: 194 TAAETASNSIEIKG----IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++ + G + ++ PE M K + DV++ G++L E+FT
Sbjct: 180 -----STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG G +V+ G ++ VA+K + + + F E + + H L+++ +
Sbjct: 16 QEIGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C E +VFE+M++ L +LR G T + + +DV + Y C
Sbjct: 74 C----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC- 126
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DL N L+ ++ V V D G+ +F+ + ++S K V + +PE
Sbjct: 127 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPE 177
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
S+ S DV++FG+L+ E+F+
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-----SFAAECNA 80
S AT+ + P +IG G VYK S VA+K V + S E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 81 LRNIR---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV 137
LR + H N+++++ +C++ + +VFE++ +++L +L ++
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++ +++ H +C IVH DLKP NIL+ + D GLA+ ++ Y +
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSY------Q 173
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A + + + Y APE + S + D+++ G + EMF RR+P
Sbjct: 174 MALTPVVV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKP 217
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 40/236 (16%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-------RSFAAECNA 80
A N +IG+GG +V+KG L + +S+VA+K + L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIA 140
+ N+ H N++K+ + + +V E++ +L L +++ + ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDLYHRLLDKAHPIKW-SVKLRLM 128
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL-----DQDIVAHVGDLGLAKFLFGYEPGTA 195
+D++ IEY + P IVH DL+ NI L + + A V D GL++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---------- 177
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVS--GDVYNFGILLLEMFTRRRPTD 246
+ + G++G ++APE + S + D Y+F ++L + T P D
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + + + +VFE++ +++L+ ++ S L + +
Sbjct: 61 HPNIVKLLDVIHTENK-----LYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 115 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 165
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 166 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 221
Query: 263 LPDKVM 268
PD+V+
Sbjct: 222 TPDEVV 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 96 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 147
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 203
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 38 IGQGGVSIVYKG-ILDESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIKII 93
IG+G +VY G +D++++ + + +L + + +F E +R + H N++ +I
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLR--QSNGQLRFLTQRVNIAIDVSFAIEYFH 151
I + EG ++ YM + +L Q++R Q N ++ L ++ + V+ +EY
Sbjct: 89 GIM--LPPEGL--PHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL- 140
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
+ VH DL N +LD+ V D GLA+ + E + + + +K +
Sbjct: 141 --AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK----W 194
Query: 212 VAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A E + + DV++FG+LL E+ TR P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 93 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 144
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 200
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLK-QKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L++++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 116 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 167
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 223
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 20/213 (9%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + EG +V YM++ +L ++R N ++ L + + V+ ++Y
Sbjct: 117 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL- 168
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
VH DL N +LD+ V D GLA+ ++ E + N K V +
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKW 222
Query: 212 VAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+A E K + DV++FG+LL E+ TR P
Sbjct: 223 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-------RSFAAECNA 80
A N +IG+GG +V+KG L + +S+VA+K + L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIA 140
+ N+ H N++K+ + + +V E++ +L L +++ + ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDLYHRLLDKAHPIKW-SVKLRLM 128
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL-----DQDIVAHVGDLGLAKFLFGYEPGTA 195
+D++ IEY + P IVH DL+ NI L + + A V D GT+
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF-----------GTS 176
Query: 196 AETASNSIEIKGIVGYVAPEYGMGSKASVS--GDVYNFGILLLEMFTRRRPTD 246
++ + + G ++APE + S + D Y+F ++L + T P D
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 90 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 141
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 197
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 98 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 149
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 205
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 97 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 148
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 204
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 98 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 149
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 205
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 103 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 154
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 210
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ ++Y
Sbjct: 95 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKYL--- 146
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E + N K V ++A
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----YYSVHNKTGAKLPVKWMA 202
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ +++L+ ++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
++G+G V+ + ++ + +VAVK + + A + F E L ++H+++++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLT-------------QRVN 138
+C+ EG +VFEYM++ +L ++LR + L Q +
Sbjct: 85 FFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+A V+ + Y VH DL N L+ Q +V +GD G+++ ++
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY---------- 186
Query: 199 ASNSIEIKG----IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++ + G + ++ PE + K + DV++FG++L E+FT
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 96 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 147
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 203
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+K + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L+ ++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 98 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 149
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 205
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 99 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 150
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 206
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ + +L++++ S L + +
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 116 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 166
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 222
Query: 263 LPDKVM 268
PD+V+
Sbjct: 223 TPDEVV 228
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
++G+G V+ + ++ + +VAVK + + A + F E L ++H+++++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLT-------------QRVN 138
+C+ EG +VFEYM++ +L ++LR + L Q +
Sbjct: 79 FFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+A V+ + Y VH DL N L+ Q +V +GD G+++ ++
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY---------- 180
Query: 199 ASNSIEIKG----IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++ + G + ++ PE + K + DV++FG++L E+FT
Sbjct: 181 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 98 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 149
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 205
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 157 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 208
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ ++ E ++ N K V ++A
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE----FDSVHNKTGAKLPVKWMA 264
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ + +L++++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 97/206 (47%), Gaps = 35/206 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVF 111
++ + +VAVK + + A + F E L ++H+++++ +C+ EG +VF
Sbjct: 68 EQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT----EGRPL-LMVF 122
Query: 112 EYMQNRNLEQWLRQSNGQLRFLT-------------QRVNIAIDVSFAIEYFHHHCQPSI 158
EYM++ +L ++LR + L Q + +A V+ + Y
Sbjct: 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHF 179
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
VH DL N L+ Q +V +GD G+++ ++ +++ + G + ++ P
Sbjct: 180 VHRDLATRNCLVGQGLVVKIGDFGMSRDIY----------STDYYRVGGRTMLPIRWMPP 229
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + K + DV++FG++L E+FT
Sbjct: 230 ESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 27/231 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEASRSFAAECNALRNIR 85
N S +G G V G L S+ ++V + LK ++ R F E + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 86 HRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI 141
H N+I++ EG K+ IV E M+N +L+ +LR+ + Q + Q V +
Sbjct: 76 HPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI-QLVGMLR 125
Query: 142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASN 201
++ ++Y VH DL NIL++ ++V V D GL++ L +P A T
Sbjct: 126 GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGG 181
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNE 251
I I+ + +PE K + + DV+++GI+L E+ + RP M N+
Sbjct: 182 KIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ 228
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRS---FAAECNALRNIRHRN 88
++G G +V ++G D VA+K++ KE S S F E + N+ H
Sbjct: 15 KELGTGQFGVVKYGKWRGQYD-----VAIKMI----KEGSMSEDEFIEEAKVMMNLSHEK 65
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV-NIAIDVSFAI 147
L+++ +C+ + F I+ EYM N L +LR+ RF TQ++ + DV A+
Sbjct: 66 LVQLYGVCTK---QRPIF--IITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAM 118
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
EY +H DL N L++ V V D GL++++ E ++S K
Sbjct: 119 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------YTSSRGSKF 168
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V + PE M SK S D++ FG+L+ E+++
Sbjct: 169 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG G +V+ G ++ VA+K + + + F E + + H L+++ +
Sbjct: 13 QEIGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C E +VFE+M++ L +LR G T + + +DV + Y +
Sbjct: 71 C----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAET-LLGMCLDVCEGMAYLE---E 121
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
S++H DL N L+ ++ V V D G+ +F+ + ++S K V + +PE
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPE 174
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
S+ S DV++FG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+ + L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 63 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 165
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 223
Query: 265 DKVM 268
D+V+
Sbjct: 224 DEVV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 118/244 (48%), Gaps = 24/244 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIRHR 87
NF KIG+G +VYK + +VA+ + L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N++K++ + I E + +VFE++ +++L++++ S L + + +
Sbjct: 62 NIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H ++H DLKP N+L++ + + D GLA+ G T ++ +
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEVV--- 164
Query: 208 IVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMALP 264
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F + P
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTP 222
Query: 265 DKVM 268
D+V+
Sbjct: 223 DEVV 226
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV E M+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 29/245 (11%)
Query: 18 PMISYAELSKATN--NFSPANKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEAS 71
P + E +K + N S +G G V G L S+ ++V + LK ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 72 RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSN 127
R F E + + H N+I++ EG K+ IV E M+N +L+ +LR+ +
Sbjct: 91 RDFLGEASIMGQFDHPNIIRL---------EGVVTKSKPVMIVTEXMENGSLDSFLRKHD 141
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
Q + Q V + ++ ++Y VH DL NIL++ ++V V D GL++ L
Sbjct: 142 AQFTVI-QLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 188 FGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTD 246
+P A T I I+ + +PE K + + DV+++GI+L E+ + RP
Sbjct: 198 ED-DPEAAYTTRGGKIPIR----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
Query: 247 AMFNE 251
M N+
Sbjct: 253 EMSNQ 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ + +L+ ++ S L + +
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 117 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 167
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 168 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 223
Query: 263 LPDKVM 268
PD+V+
Sbjct: 224 TPDEVV 229
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 24/246 (9%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL-KQKEASRSFA-AECNALRNIR 85
+ NF KIG+G +VYK + +VA+K + L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
H N++K++ + I E + +VFE++ + +L+ ++ S L + +
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+ + H H ++H DLKP N+L++ + + D GLA+ G T + +
Sbjct: 118 GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEVV- 168
Query: 206 KGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRR--PTDAMFNEGLTLHEFVKMA 262
+ Y APE +G K S + D+++ G + EM TRR P D+ ++ + F +
Sbjct: 169 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLG 224
Query: 263 LPDKVM 268
PD+V+
Sbjct: 225 TPDEVV 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 22/226 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRN 88
+F P +G+GG +V++ A+K + L +E +R E AL + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 89 LIKIITIC----SSIDFEGFDFKAIVFEYMQ---NRNLEQWLRQSNGQL----RFLTQRV 137
+++ ++ + K ++ MQ NL+ W+ NG+ R + +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERSVCL 121
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL-FGYEPGTAA 196
+I + ++ A+E+ H ++H DLKPSNI D V VGD GL + E T
Sbjct: 122 HIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 197 ETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMF 239
G VG Y++PE G+ S D+++ G++L E+
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G VY G L D + AVK +N + F E +++ H N++ ++
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
IC + EG +V YM++ +L ++R + + + V+ +++
Sbjct: 99 GIC--LRSEGSPL--VVLPYMKHGDLRNFIRNETHNPT-VKDLIGFGLQVAKGMKFL--- 150
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH DL N +LD+ V D GLA+ + E ++ N K V ++A
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE----FDSVHNKTGAKLPVKWMA 206
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E K + DV++FG+LL E+ TR P
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-------RSFAAECNA 80
A N +IG+GG +V+KG L + +S+VA+K + L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIA 140
+ N+ H N++K+ + + +V E++ +L L +++ + ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDLYHRLLDKAHPIKW-SVKLRLM 128
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL-----DQDIVAHVGDLGLAKFLFGYEPGTA 195
+D++ IEY + P IVH DL+ NI L + + A V D L++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---------- 177
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVS--GDVYNFGILLLEMFTRRRPTD 246
+ + G++G ++APE + S + D Y+F ++L + T P D
Sbjct: 178 ----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 26/217 (11%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVVNL---KQKEASRSFAAECNALRNIRHRNLIK 91
+G+G V +G L D + VAVK + L Q+E F +E +++ H N+I+
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIE-EFLSEAACMKDFSHPNVIR 100
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWL---RQSNGQLRFLTQRV-NIAIDVSFAI 147
++ +C + +G ++ +M+ +L +L R G Q + +D++ +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG---YEPGTAAETASNSIE 204
EY + + +H DL N +L D+ V D GL+K ++ Y G A+ I
Sbjct: 161 EYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR 241
I+ + V + DV+ FG+ + E+ TR
Sbjct: 218 IESLADRV---------YTSKSDVWAFGVTMWEIATR 245
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 30/213 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-----RSFAAECNALRNIRHRNLIKI 92
+G+G + VYK + IVA+K + L + + R+ E L+ + H N+I +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 93 ITICSSIDFEGFDFKA---IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
+ + F K+ +VF++M+ +LE ++ ++ L + + + + +EY
Sbjct: 78 L--------DAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQ-GLEY 127
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H I+H DLKP+N+LLD++ V + D GLAK G+ + + +
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-----GSPNRAYXHQVVTR--- 176
Query: 210 GYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTR 241
Y APE G++ V D++ G +L E+ R
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG G +V+ G ++ VA+K + + + F E + + H L+++ +
Sbjct: 14 QEIGSGQFGLVHLGYW-LNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C E +V E+M++ L +LR G T + + +DV + Y C
Sbjct: 72 C----LEQAPI-CLVTEFMEHGCLSDYLRTQRGLFAAET-LLGMCLDVCEGMAYLEEAC- 124
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DL N L+ ++ V V D G+ +F+ + ++S K V + +PE
Sbjct: 125 --VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-------DQYTSSTGTKFPVKWASPE 175
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
S+ S DV++FG+L+ E+F+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIIT 94
++G G V+ G + S + VAVK LK S ++F E N ++ ++H L+++
Sbjct: 19 KRLGAGQFGEVWMGYYNNS-TKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ + + I+ EYM +L +L+ G L + ++ + ++ + Y
Sbjct: 76 VVTREEP-----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK- 129
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ +H DL+ +N+L+ + ++ + D GLA+ + E TA E A I+ + AP
Sbjct: 130 --NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIK------WTAP 180
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E ++ DV++FGILL E+ T
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
K+G G V+ ++ + VAVK + + +F AE N ++ ++H L+K+ +
Sbjct: 188 KKLGAGQFGEVWMATYNK-HTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ I+ E+M +L +L+ G + L + ++ + ++ + + Q
Sbjct: 246 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---Q 296
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+ +H DL+ +NIL+ +V + D GLA+ + K + + APE
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLAR-----------------VGAKFPIKWTAPE 339
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR-PTDAMFNEGL--TLHEFVKMALPDKVME 269
++ DV++FGILL+E+ T R P M N + L +M P+ E
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPE 396
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 20/204 (9%)
Query: 41 GGVSI-VYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITICSS 98
G VS+ Y D + +VAVK + RS + E + LR + H ++IK C
Sbjct: 45 GKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 104
Query: 99 IDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
G +V EY+ +L +L R S G L Q + A + + Y H
Sbjct: 105 A---GAASLQLVMEYVPLGSLRDYLPRHSIG----LAQLLLFAQQICEGMAYLHAQ---H 154
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLF-GYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H DL N+LLD D + +GD GLAK + G+E E + V + APE
Sbjct: 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP------VFWYAPEC 208
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
K + DV++FG+ L E+ T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 32 FSPANKI-----GQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
F P++ I G+G K E+ ++ +K + +E R+F E +R + H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA 146
N++K I + F + EY++ L ++ + Q + +QRV+ A D++
Sbjct: 67 PNVLKFIGVLYKDKRLNF-----ITEYIKGGTLRGIIKSMDSQYPW-SQRVSFAKDIASG 120
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG--YEP-GTAAETASNSI 203
+ Y H +I+H DL N L+ ++ V D GLA+ + +P G + +
Sbjct: 121 MAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
Query: 204 EIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTR 241
+ +VG ++APE G DV++FGI+L E+ R
Sbjct: 178 KRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+G V +++ VA+K ++ LK+ + E + L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 95 ICSS-------IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
+ ++ I++ G + +F+Y+ + + + + G+ RF Q + AI
Sbjct: 77 VITTPTDIVMVIEYAGGE----LFDYIVEK---KRMTEDEGR-RFFQQ-------IICAI 121
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
EY H H IVH DLKP N+LLD ++ + D GL+ + G +T+ S
Sbjct: 122 EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFLKTSCGS----- 170
Query: 208 IVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTDAMF 249
Y APE G A DV++ GI+L M R P D F
Sbjct: 171 -PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NEGL + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSAXKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NEGL + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 41 GGVSI-VYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITICSS 98
G VS+ Y D + +VAVK + RS + E + LR + H ++IK C
Sbjct: 28 GKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 87
Query: 99 IDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+G +V EY+ +L +L R S G L Q + A + + Y H
Sbjct: 88 ---QGEKSLQLVMEYVPLGSLRDYLPRHSIG----LAQLLLFAQQICEGMAYLHSQ---H 137
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLF-GYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H +L N+LLD D + +GD GLAK + G+E E + V + APE
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPEC 191
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
K + DV++FG+ L E+ T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 38 IGQGGVSIVYKGILD-ESRSIVAVKVVNLK---QKEASRSFAAECNALRNIRHRNLIK-- 91
IG G V G L + VAV + LK ++ R F E + + H N++
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 92 -IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
++T + IV E+M+N L+ +LR+ +GQ + Q V + ++ + Y
Sbjct: 111 GVVTRGKPV--------MIVIEFMENGALDAFLRKHDGQFTVI-QLVGMLRGIAAGMRYL 161
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
VH DL NIL++ ++V V D GL++ + +P T I ++
Sbjct: 162 ---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED-DPEAVYTTTGGKIPVR---- 213
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNE 251
+ APE K + + DV+++GI++ E+ + RP M N+
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 255
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 41 GGVSI-VYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITICSS 98
G VS+ Y D + +VAVK + RS + E + LR + H ++IK C
Sbjct: 28 GKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED 87
Query: 99 IDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+G +V EY+ +L +L R S G L Q + A + + Y H
Sbjct: 88 ---QGEKSLQLVMEYVPLGSLRDYLPRHSIG----LAQLLLFAQQICEGMAYLHAQ---H 137
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLF-GYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H +L N+LLD D + +GD GLAK + G+E E + V + APE
Sbjct: 138 YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPEC 191
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
K + DV++FG+ L E+ T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALRNIRHRNLIKIIT 94
+K+G+G + VYKG + ++VA+K + L+ +E + A E + L++++H N I+T
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN---IVT 64
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ I E +VFEY+ +++L+Q+L + ++ + + + Y H
Sbjct: 65 LHDIIHTE--KSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQ- 119
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
++H DLKP N+L+++ G+L LA F +T N + + Y P
Sbjct: 120 --KVLHRDLKPQNLLINER-----GELKLADFGLARAKSIPTKTYDNEV---VTLWYRPP 169
Query: 215 EYGMGS-KASVSGDVYNFGILLLEMFTRR 242
+ +GS S D++ G + EM T R
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIIT 94
K+G G V+ G + S + VAVK LK S ++F E N ++ ++H L+++
Sbjct: 18 KKLGAGQFGEVWMGYYNNS-TKVAVK--TLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ + + I+ E+M +L +L+ G L + ++ + ++ + Y
Sbjct: 75 VVTKEEP-----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK- 128
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+ +H DL+ +N+L+ + ++ + D GLA+ + E TA E A I+ + AP
Sbjct: 129 --NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIK------WTAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E ++ +V++FGILL E+ T
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGCLLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A++ + G YV+PE AS S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANSFV---GTAQYVSPELLTEKSASKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 45 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 104
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 105 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 159
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A++ + G YV+PE A S D
Sbjct: 160 ILLNEDMHIQITDFGTAKVL---SPESKQARANSFV---GTAQYVSPELLTEKSACKSSD 213
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 214 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 271
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 39 GQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI--- 95
+G V+K L VAVK+ L+ K++ +S E + ++H NL++ I
Sbjct: 24 ARGRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKR 80
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
S+++ E + ++ + +L +L+ G + + ++A +S + Y H
Sbjct: 81 GSNLEVELW----LITAFHDKGSLTDYLK---GNIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 155 -------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+PSI H D K N+LL D+ A + D GLA +EPG + G
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRFEPGKPPGDTHGQV---G 187
Query: 208 IVGYVAPEYGMGS-----KASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
Y+APE G+ A + D+Y G++L E+ +R + D +E
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 49 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 108
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 109 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 163
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A++ + G YV+PE A S D
Sbjct: 164 ILLNEDMHIQITDFGTAKVL---SPESKQARANSFV---GTAQYVSPELLTEKSACKSSD 217
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 218 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 275
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 84 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 136
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR-----KVPF 188
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 21/211 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 74 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 126
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR-----KVPF 178
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ APE S + D + FG+ L EMFT
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 183
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 184 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
Query: 247 AMFNE 251
+ NE
Sbjct: 237 GLSNE 241
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 176
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 177 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 229
Query: 247 AMFNE 251
+ NE
Sbjct: 230 GLSNE 234
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 30 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 89
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 90 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 144
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 145 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 198
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 199 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 24 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 83
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 84 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 138
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 139 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 192
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 193 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 250
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 180
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 181 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 233
Query: 247 AMFNE 251
+ NE
Sbjct: 234 GLSNE 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 105
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 106 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 160
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 161 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 214
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 215 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 25 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 84
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 85 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 139
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 140 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 193
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 194 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 251
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 74 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 126
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KVPF 178
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 43/262 (16%)
Query: 20 ISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--E 77
+S A + + + + K+G+G VYK I + VA+K + L+ +E A E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLR----F 132
+ L+ ++HRN+I++ ++ ++FEY +N +L++++ + + +R F
Sbjct: 84 VSLLKELQHRNIIELKSV-----IHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF 137
Query: 133 LTQRVNIAIDVSFAIEYFH-HHCQPSIVHGDLKPSNILL-----DQDIVAHVGDLGLAKF 186
L Q +N + + H C +H DLKP N+LL + V +GD GLA+
Sbjct: 138 LYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
Query: 187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRR-- 243
G ++ I + Y PE +GS+ S S D+++ + EM +
Sbjct: 187 F-----GIPIRQFTHEI---ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF 238
Query: 244 PTDAMFNEGLTLHEFVKMALPD 265
P D+ ++ + E + LPD
Sbjct: 239 PGDSEIDQLFKIFEV--LGLPD 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 23 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 82
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 83 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 137
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 138 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 191
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 192 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 249
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 26 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 85
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 86 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 140
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 141 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 194
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 195 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 252
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 40/254 (15%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS----FAAECNALRNIRHRNLIKI 92
+IG+G VYKG+ ++ + V V L+ ++ ++S F E L+ ++H N+++
Sbjct: 33 EIGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI----AIDVSFAIE 148
S +G +V E + L+ +L+ RF ++ + + ++
Sbjct: 91 YDSWEST-VKGKKCIVLVTELXTSGTLKTYLK------RFKVXKIKVLRSWCRQILKGLQ 143
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H P I+H DLK NI + + +GDLGLA + AS + + G
Sbjct: 144 FLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----------KRASFAKAVIG 192
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFN---------EGLTLHEF 258
+ APE K S DVY FG LE T P N G+ F
Sbjct: 193 TPEFXAPEX-YEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASF 251
Query: 259 VKMALPDKVMEIVD 272
K+A+P+ V EI++
Sbjct: 252 DKVAIPE-VKEIIE 264
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 182
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 183 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
Query: 247 AMFNE 251
+ NE
Sbjct: 236 GLSNE 240
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 45 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 104
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 105 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 159
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 160 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 213
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 214 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 271
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 189
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 190 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 247 AMFNE 251
+ NE
Sbjct: 243 GLSNE 247
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 182
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 183 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 235
Query: 247 AMFNE 251
+ NE
Sbjct: 236 GLSNE 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 48 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 107
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 108 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 162
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 163 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 216
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 217 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 274
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 78 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 130
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KVPF 182
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 183 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 51 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 110
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 111 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 165
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 166 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 219
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM------ALPDKVMEIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ A K ++V+ L+L+ T
Sbjct: 220 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDAT 277
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 105
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 106 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 160
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 161 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 214
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 215 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 173
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 174 ------XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY- 226
Query: 247 AMFNEGLTLHEFVKMALPDKVMEIVD--PSLLLEV 279
+GL+ + ++ + +++ D P +LLE+
Sbjct: 227 ----QGLSNEQVLRFVMEGGLLDKPDNCPDMLLEL 257
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 53 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKL 112
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 113 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 167
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 168 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 221
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 222 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 279
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 21/230 (9%)
Query: 37 KIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNLI 90
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 79 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGYL 131
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
+H DL N+LL + +GD GL + L + + K
Sbjct: 132 ESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KVPFA 183
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 46 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 105
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 106 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 160
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 161 ILLNEDMHIQITDFGTAKVL---SPESKQARANAFV---GTAQYVSPELLTEKSACKSSD 214
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 215 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 62 VVNLKQKEASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAI 109
VV ++ SR +A + R+I N + +T + S +D F D + +
Sbjct: 49 VVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL 108
Query: 110 VF--EYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
F Y +N L +++R+ G R A VS A+EY H I+H DLKP N
Sbjct: 109 YFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPEN 163
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILL++D+ + D G AK L P + A+ + G YV+PE A S D
Sbjct: 164 ILLNEDMHIQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSD 217
Query: 228 VYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ G ++ ++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 218 LWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 275
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDV 143
+N+I ++ + E F IV E M + NL Q ++ + ++ +L ++ + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLVGIK- 140
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
H H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 141 -------HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLAR------------TAGTSF 180
Query: 204 EIKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G+++ EM
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGVIMGEM 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 84 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 136
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KVPF 188
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 21/231 (9%)
Query: 36 NKIGQGGVSIVYKGILD-ESRSIVAVKVVNLK-----QKEASRSFAAECNALRNIRHRNL 89
K+G G +V +G D S V+V V LK Q EA F E NA+ ++ HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
I++ + + + +V E +L LR+ G L A+ V+ + Y
Sbjct: 74 IRLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHF-LLGTLSRYAVQVAEGMGY 126
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+H DL N+LL + +GD GL + L + + K
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KVPF 178
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+ APE S + D + FG+ L EMFT + N LH+ K
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDV 143
+N+I ++ + E F IV E M + NL Q ++ + ++ +L ++ + I
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLVGIK- 140
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
H H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 141 -------HLHSA-GIIHRDLKPSNIVVKSDATLKILDFGLAR------------TAGTSF 180
Query: 204 EIKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G+++ EM
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGVIMGEM 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 XGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-- 182
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 183 ------XETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 236
Query: 247 AMFNE 251
+ NE
Sbjct: 237 GLSNE 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 31/210 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVK--VVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+G+G +V K ++ IVA+K + + K + E L+ +RH NL+ ++ +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ-----LRFLTQRVNIAIDVSFAIEYF 150
C +VFE++ + L+ NG ++L Q +N I +
Sbjct: 93 CKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN-------GIGFC 140
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
H H +I+H D+KP NIL+ Q V + D G A+ L E + + +
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-----AAPGEVYDDEVATR---W 189
Query: 211 YVAPEYGMGS-KASVSGDVYNFGILLLEMF 239
Y APE +G K + DV+ G L+ EMF
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 111/245 (45%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S +G ++ E M +L+ +LR ++
Sbjct: 101 ASVMKEFNCHHVVRLLGVVS----QG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 211
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 212 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 264
Query: 247 AMFNE 251
+ NE
Sbjct: 265 GLSNE 269
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 58
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 59 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 117
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G + +N
Sbjct: 118 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDEMAN- 164
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAM 248
E G Y++PE G+ SV D+++ G+ L+EM R P M
Sbjct: 165 -EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 123/275 (44%), Gaps = 40/275 (14%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR ++
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N + +D +GD G+ + ++
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY- 176
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 177 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY- 228
Query: 247 AMFNEGLTLHEFVKMALPDKVMEIVD--PSLLLEV 279
+GL+ + ++ + +++ D P +LLE+
Sbjct: 229 ----QGLSNEQVLRFVMEGGLLDKPDNCPDMLLEL 259
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+G IVY G ++ +A+K + + S+ E ++++H+N+++ +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG--- 86
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQP 156
F F I E + +L LR G L+ Q + + ++Y H +
Sbjct: 87 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 141
Query: 157 SIVHGDLKPSNILLDQ-DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
IVH D+K N+L++ V + D G +K L G P T T G + Y+APE
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--------GTLQYMAPE 193
Query: 216 ------YGMGSKASVSGDVYNFGILLLEMFTRR-------RPTDAMFNEGL 253
G G A D+++ G ++EM T + P AMF G+
Sbjct: 194 IIDKGPRGYGKAA----DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 240
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 129
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 130 XGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSFM 174
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 XGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 25 LSKATNNFSPANKIGQGGVSIVYKGI-LDESRSIVAVKVVNLKQKEASRSFAA--ECNAL 81
L +A + +IG+G V+K L VA+K V ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 82 RNIR---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVN 138
R++ H N++++ +C+ + +VFE++ +++L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+ + +++ H H +VH DLKP NIL+ + D GLA+ + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQM 174
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A S+ + + Y APE + S + D+++ G + EMF RR+P
Sbjct: 175 ALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 25 LSKATNNFSPANKIGQGGVSIVYKGI-LDESRSIVAVKVVNLKQKEASRSFAA--ECNAL 81
L +A + +IG+G V+K L VA+K V ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 82 RNIR---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVN 138
R++ H N++++ +C+ + +VFE++ +++L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+ + +++ H H +VH DLKP NIL+ + D GLA+ + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQM 174
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A S+ + + Y APE + S + D+++ G + EMF RR+P
Sbjct: 175 ALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE-----ASRSFAAECNALRNIRH 86
+S +IG GG S V++ +L+E + I A+K VNL++ + + R+ A N L+ +H
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 70
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA 146
+ KII + D+E D + N +L WL++ + +R + ++ A
Sbjct: 71 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEA 123
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
+ H H IVH DLKP+N L+ D + + D G+A + +P T + + +
Sbjct: 124 VHTIHQH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV--- 173
Query: 207 GIVGYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTL 255
G V Y+ PE +S DV++ G +L M + P + N+ L
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
Query: 256 HEFV----KMALPD 265
H + ++ PD
Sbjct: 234 HAIIDPNHEIEFPD 247
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNL 89
+S +IG GG S V++ +L+E + I A+K VNL++ + S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
KII + D+E D + N +L WL++ + +R + ++ A+
Sbjct: 88 DKIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEAVHT 142
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H IVH DLKP+N L+ D + + D G+A + +P T + + + G V
Sbjct: 143 IHQH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTV 192
Query: 210 GYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
Y+ PE +S DV++ G +L M + P + N+ LH
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 252
Query: 259 V----KMALPD 265
+ ++ PD
Sbjct: 253 IDPNHEIEFPD 263
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 102/226 (45%), Gaps = 20/226 (8%)
Query: 25 LSKATNNFSPANKIGQGGVSIVYKGI-LDESRSIVAVKVVNLKQKEASRSFAA--ECNAL 81
L +A + +IG+G V+K L VA+K V ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 82 RNIR---HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVN 138
R++ H N++++ +C+ + +VFE++ +++L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKD 124
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+ + +++ H H +VH DLKP NIL+ + D GLA+ + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY-------SFQM 174
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A S+ + + Y APE + S + D+++ G + EMF RR+P
Sbjct: 175 ALTSVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 24/225 (10%)
Query: 36 NKIGQG--GVSIVYKGILDESRSIVA---VKVVNLKQKEASRSFAAECNALRNIRHRNLI 90
KIG+G G +I+ K D + ++ + ++ K++E SR E L N++H N++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRR---EVAVLANMKHPNIV 86
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
+ FE IV +Y + +L + + G L Q ++ + + A+++
Sbjct: 87 QYRE-----SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
H I+H D+K NI L +D +GD G+A+ L + E A I G
Sbjct: 142 HDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-----NSTVELARACI---GTPY 190
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTL 255
Y++PE + D++ G +L E+ T + +A + L L
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR--------FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR + L + + +A +
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + ++ ETA
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--------ETAYYR 187
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 70 ASRSFAAECNALRNIRHRNLIKIIT----ICSSIDFEGF--------DFKAIVF--EYMQ 115
SR +A + R+I N + +T + S +D F D + + F Y +
Sbjct: 54 TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 113
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
N L +++R+ G R A VS A+EY H I+H DLKP NILL++D+
Sbjct: 114 NGELLKYIRKI-GSFDETCTRFYTAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMH 168
Query: 176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
+ D G AK L P + A+ + G YV+PE A S D++ G ++
Sbjct: 169 IQITDFGTAKVL---SPESKQARANXFV---GTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 236 LEMFTRRRPTDAMFNEGLTLHEFVKMA--LPDKVM----EIVDPSLLLEVT 280
++ P A NE L + +K+ P+K ++V+ L+L+ T
Sbjct: 223 YQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDAT 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE-----ASRSFAAECNALRNIRH 86
+S +IG GG S V++ +L+E + I A+K VNL++ + + R+ A N L+ +H
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 66
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA 146
+ KII + D+E D + N +L WL++ + +R + ++ A
Sbjct: 67 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEA 119
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
+ H H IVH DLKP+N L+ ++ + D G+A + +P T + + +
Sbjct: 120 VHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM---QPDTTSVVKDSQV--- 169
Query: 207 GIVGYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTL 255
G V Y+ PE +S DV++ G +L M + P + N+ L
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
Query: 256 HEFV----KMALPD 265
H + ++ PD
Sbjct: 230 HAIIDPNHEIEFPD 243
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 55
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 115 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 162
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 163 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 55
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 115 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 162
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 163 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNL 89
+S +IG GG S V++ +L+E + I A+K VNL++ + S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 68
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
KII + D+E D + N +L WL++ + +R + ++ A+
Sbjct: 69 DKIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEAVHT 123
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H IVH DLKP+N L+ ++ + D G+A + +P T + + + G V
Sbjct: 124 IHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM---QPDTTSVVKDSQV---GTV 173
Query: 210 GYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
Y+ PE +S DV++ G +L M + P + N+ LH
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 233
Query: 259 V----KMALPD 265
+ ++ PD
Sbjct: 234 IDPNHEIEFPD 244
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 120
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 174
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 175 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 219
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 260
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 34/251 (13%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNL 89
+S +IG GG S V++ +L+E + I A+K VNL++ + S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
KII + D+E D + N +L WL++ + +R + ++ A+
Sbjct: 116 DKIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEAVHT 170
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H IVH DLKP+N L+ D + + D G+A + +P T + + + G V
Sbjct: 171 IHQH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTV 220
Query: 210 GYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
Y+ PE +S DV++ G +L M + P + N+ LH
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 259 V----KMALPD 265
+ ++ PD
Sbjct: 281 IDPNHEIEFPD 291
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 82
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 83 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 141
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 142 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 189
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 190 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 87 RNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 55
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 115 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 162
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 163 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 129
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 130 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 174
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 175
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 216
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 55
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 115 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 162
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 163 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 55
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 115 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 162
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 163 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 35/231 (15%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+G IVY G ++ +A+K + + S+ E ++++H+N+++ +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG--- 72
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQP 156
F F I E + +L LR G L+ Q + + ++Y H +
Sbjct: 73 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN--- 127
Query: 157 SIVHGDLKPSNILLDQ-DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
IVH D+K N+L++ V + D G +K L G P T T G + Y+APE
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--------GTLQYMAPE 179
Query: 216 Y------GMGSKASVSGDVYNFGILLLEMFTRR-------RPTDAMFNEGL 253
G G A D+++ G ++EM T + P AMF G+
Sbjct: 180 IIDKGPRGYGKAA----DIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 226
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 182
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 81
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 135
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 136 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 180
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 181 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 120
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 174
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 175 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 219
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 260
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 175
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 216
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 182
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 117
Query: 90 IKIITICSSIDFEGF------DFK-AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S GF D + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 118 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 176
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 177 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 224
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 225 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 189
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 190 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 242
Query: 247 AMFNE 251
+ NE
Sbjct: 243 GLSNE 247
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y +LD + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F +V E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 108/245 (44%), Gaps = 33/245 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASR-SFAAE 77
E A + + ++GQG +VY+G+ DE + VA+K VN R F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 78 CNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR------ 131
+ ++ ++++++ + S ++ E M +L+ +LR +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 132 --FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
L++ + +A +++ + Y + + VH DL N ++ +D +GD G+ + ++
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 179
Query: 190 YEPGTAAETASNSIEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTD 246
ET KG+ V +++PE + DV++FG++L E+ T +P
Sbjct: 180 -------ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ 232
Query: 247 AMFNE 251
+ NE
Sbjct: 233 GLSNE 237
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 32/215 (14%)
Query: 12 SMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL------ 65
SM + + +A + + P + IG+G S+V + + + AVK++ +
Sbjct: 76 SMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLS 135
Query: 66 --KQKEASRSFAAECNALRNIR-HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQW 122
+ +E + E + LR + H ++I +I +E F +VF+ M+ L +
Sbjct: 136 PEQLEEVREATRRETHILRQVAGHPHIITLID-----SYESSSFMFLVFDLMRKGELFDY 190
Query: 123 LRQSNGQLRFLTQRVNIAIDVSF--AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGD 180
L + L+++ +I S A+ + H + +IVH DLKP NILLD ++ + D
Sbjct: 191 LTEKVA----LSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSD 243
Query: 181 LGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
G + L EPG E+ G GY+APE
Sbjct: 244 FGFSCHL---EPGEKLR------ELCGTPGYLAPE 269
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V K S I+A K+++L+ K A +RN R L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA----------IRNQIIREL 65
Query: 90 IKIITICSSIDFEGF------DFK-AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S GF D + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 66 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVL 124
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
A Y Q I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 125 RGLA--YLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 172
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y+APE G+ SV D+++ G+ L+E+ R P
Sbjct: 173 F--VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNL 89
+S +IG GG S V++ +L+E + I A+K VNL++ + S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
KII + D+E D + N +L WL++ + +R + ++ A+
Sbjct: 116 DKIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEAVHT 170
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H IVH DLKP+N L+ ++ + D G+A + +P T + + + G V
Sbjct: 171 IHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM---QPDTTSVVKDSQV---GTV 220
Query: 210 GYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
Y+ PE +S DV++ G +L M + P + N+ LH
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 259 VKMALPDKVMEIVD 272
+ P+ +E D
Sbjct: 281 ID---PNHEIEFPD 291
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALRNIRHRNLIKIITI 95
KIG+G +VYK + + K+ K+ E S E + L+ ++H N++K+ +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ +VFE++ +++L++ L G L +T + + + + I Y H
Sbjct: 69 IHTKKR-----LVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDR-- 119
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DLKP N+L++++ + D GLA+ G ++ I + Y AP+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAF-----GIPVRKYTHEIV---TLWYRAPD 170
Query: 216 YGMGSKA-SVSGDVYNFGILLLEM 238
MGSK S + D+++ G + EM
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEM 194
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 137
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 138 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 182
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 219
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N+FS IG+GG VY ++ + A+K ++ K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 90 IKIIT-------ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVN 138
+ +++ +C S F D + + + M +L L Q S +RF
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------ 296
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A ++ +E+ H+ +V+ DLKP+NILLD+ + DLGLA +P +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 199 ASNSIEIKGIVGYVAPE-YGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G GY+APE G S D ++ G +L ++ P
Sbjct: 352 --------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N+FS IG+GG VY ++ + A+K ++ K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 90 IKIIT-------ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVN 138
+ +++ +C S F D + + + M +L L Q S +RF
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------ 296
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A ++ +E+ H+ +V+ DLKP+NILLD+ + DLGLA +P +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 199 ASNSIEIKGIVGYVAPE-YGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G GY+APE G S D ++ G +L ++ P
Sbjct: 352 --------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIG+G V+K E+ IVA+K V L + +A E L+ ++H+N++++
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 95 ICSSIDFEGFDFK-AIVFEYMQNRNLEQWLRQSNGQL------RFLTQRVNIAIDVSFAI 147
+ S D K +VFE+ +++L+++ NG L FL Q + +
Sbjct: 69 VLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GL 114
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H +++H DLKP N+L++++ + D GLA+ G S +
Sbjct: 115 GFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAF-----GIPVRCYSAEVV--- 163
Query: 208 IVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRP 244
+ Y P+ G+K S S D+++ G + E+ RP
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
++ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVCHK 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 33/254 (12%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR--SFAAECNALRNIRHRNL 89
+S +IG GG S V++ +L+E + I A+K VNL++ + S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
KII + D+E D + N +L WL++ + +R + ++ A+
Sbjct: 116 DKIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEAVHT 170
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H H IVH DLKP+N L+ ++ + D G+A + +P T + + + G V
Sbjct: 171 IHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM---QPDTTSVVKDSQV---GAV 220
Query: 210 GYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
Y+ PE +S DV++ G +L M + P + N+ LH
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI 280
Query: 259 VKMALPDKVMEIVD 272
+ P+ +E D
Sbjct: 281 ID---PNHEIEFPD 291
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 32/222 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++F +++G G +V+K S ++A K+++L+ K A +RN R L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA----------IRNQIIREL 74
Query: 90 IKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
+++ C+S + F G + +I E+M +L+Q L+++ + +V+IA+
Sbjct: 75 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 133
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
H I+H D+KPSNIL++ + D G++ G ++ +NS
Sbjct: 134 KGLTYLREKH----KIMHRDVKPSNILVNSRGEIKLCDFGVS--------GQLIDSMANS 181
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G Y++PE G+ SV D+++ G+ L+EM R P
Sbjct: 182 F--VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N+FS IG+GG VY ++ + A+K ++ K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 90 IKIIT-------ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVN 138
+ +++ +C S F D + + + M +L L Q S +RF
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------ 296
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A ++ +E+ H+ +V+ DLKP+NILLD+ + DLGLA +P +
Sbjct: 297 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 351
Query: 199 ASNSIEIKGIVGYVAPE-YGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G GY+APE G S D ++ G +L ++ P
Sbjct: 352 --------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 37/227 (16%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N+FS IG+GG VY ++ + A+K ++ K+ + + N R +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 241
Query: 90 IKIIT-------ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVN 138
+ +++ +C S F D + + + M +L L Q S +RF
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF------ 295
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A ++ +E+ H+ +V+ DLKP+NILLD+ + DLGLA +P +
Sbjct: 296 YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-- 350
Query: 199 ASNSIEIKGIVGYVAPE-YGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G GY+APE G S D ++ G +L ++ P
Sbjct: 351 --------GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 86/225 (38%), Gaps = 37/225 (16%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLI 90
+F IG GG V+K +K V ++A R E AL + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 91 KIITICSSIDFEGFDFKA----------------IVFEYMQNRNLEQWLRQSNGQLRFLT 134
C ++GFD+ I E+ LEQW+ + G+
Sbjct: 68 HY-NGC----WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV 122
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
+ + ++ ++Y H +++ DLKPSNI L +GD GL T
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV---------T 170
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
+ + KG + Y++PE D+Y G++L E+
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 87 RNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 130
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 131 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 175
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 87
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 141
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 142 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 186
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
+ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 187 MTPYVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALRNIRHRNLIKIITI 95
KIG+G +VYK + + K+ K+ E S E + L+ ++H N++K+ +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ +VFE++ +++L++ L G L +T + + + + I Y H
Sbjct: 69 IHTKKR-----LVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDR-- 119
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DLKP N+L++++ + D GLA+ G ++ + + Y AP+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAF-----GIPVRKYTHEVV---TLWYRAPD 170
Query: 216 YGMGSKA-SVSGDVYNFGILLLEM 238
MGSK S + D+++ G + EM
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEM 194
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA + + E
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFMMTPE 185
Query: 205 IKGIVGYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ Y APE GMG K +V D+++ G ++ EM
Sbjct: 186 VVTRY-YRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITICS-SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 84
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 138
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 139 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 183
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+ V Y APE GMG K +V D+++ G ++ EM
Sbjct: 184 MVPFVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALRNIRHRNLIKIITI 95
KIG+G +VYK + + K+ K+ E S E + L+ ++H N++K+ +
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ +VFE++ +++L++ L G L +T + + + + I Y H
Sbjct: 69 IHTKKR-----LVLVFEHL-DQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDR-- 119
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H DLKP N+L++++ + D GLA+ G ++ + + Y AP+
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAF-----GIPVRKYTHEVV---TLWYRAPD 170
Query: 216 YGMGSKA-SVSGDVYNFGILLLEM 238
MGSK S + D+++ G + EM
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEM 194
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K N P QG V Y IL+ + +I + Q A R++ E ++ + H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 87 RNLIKIITI-CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVS 144
+N+I ++ + E F IV E M + NL Q + Q+ +R++ + +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI-----QMELDHERMSYLLYQML 136
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
I++ H I+H DLKPSNI++ D + D GLA+ TA S
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TAGTSFM 181
Query: 205 IKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEMFTRR 242
++ V Y APE GMG K +V D+++ G ++ EM +
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+ + ++KG + +V V V SR F EC LR H N++ ++ C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S ++ +M +L L + + +Q V A+D++ + + H +P
Sbjct: 77 QS---PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEP 132
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
I L ++++D+D+ A + + KF F PG A +VAPE
Sbjct: 133 LIPRHALNSRSVMIDEDMTARIS-MADVKFSF-QSPGRMYAPA-----------WVAPEA 179
Query: 217 GMGSKASV---SGDVYNFGILLLEMFTRRRP 244
S D+++F +LL E+ TR P
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SVHAPSSRRT 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
E+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 41 GGVSI-VYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITICSS 98
G VS+ Y D + +VAVK + RS + E LR + H +++K C
Sbjct: 23 GKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED 82
Query: 99 IDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+G +V EY+ +L +L R G L Q + A + + Y H
Sbjct: 83 ---QGEKSVQLVMEYVPLGSLRDYLPRHCVG----LAQLLLFAQQICEGMAYLHAQ---H 132
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFL-FGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H L N+LLD D + +GD GLAK + G+E E + V + APE
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPEC 186
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
K + DV++FG+ L E+ T
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIG+G V+K E+ IVA+K V L + +A E L+ ++H+N++++
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 95 ICSSIDFEGFDFK-AIVFEYMQNRNLEQWLRQSNGQL------RFLTQRVNIAIDVSFAI 147
+ S D K +VFE+ +++L+++ NG L FL Q + +
Sbjct: 69 VLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLK-------GL 114
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H +++H DLKP N+L++++ G+L LA F G S +
Sbjct: 115 GFCHSR---NVLHRDLKPQNLLINRN-----GELKLANFGLARAFGIPVRCYSAEVV--- 163
Query: 208 IVGYVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRP 244
+ Y P+ G+K S S D+++ G + E+ RP
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 41 GGVSI-VYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNLIKIITICSS 98
G VS+ Y D + +VAVK + RS + E LR + H +++K C
Sbjct: 22 GKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED 81
Query: 99 IDFEGFDFKAIVFEYMQNRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+G +V EY+ +L +L R G L Q + A + + Y H
Sbjct: 82 ---QGEKSVQLVMEYVPLGSLRDYLPRHCVG----LAQLLLFAQQICEGMAYLHAQ---H 131
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFL-FGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H L N+LLD D + +GD GLAK + G+E E + V + APE
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP------VFWYAPEC 185
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
K + DV++FG+ L E+ T
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLR---FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR N R L + + +A +
Sbjct: 83 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + ++ ET
Sbjct: 138 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--------ETDYYR 186
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 187 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR--------FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR + L + + +A +
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + ++ ET
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--------ETDYYR 187
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVK-VVNLKQKEASRSFA-AECNALRNIRHR 87
+ KIG+G +V+K ++ IVA+K + + + A E L+ ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
NL+ ++ + F +VFEY + L + R G L + +I A+
Sbjct: 63 NLVNLLEV-----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK--SITWQTLQAV 115
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
+ H H + +H D+KP NIL+ + V + D G A+ L G E A+
Sbjct: 116 NFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR------ 166
Query: 208 IVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFT 240
Y +PE +G ++ DV+ G + E+ +
Sbjct: 167 --WYRSPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLR---FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR N R L + + +A +
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + + ET
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXXR 187
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 84/233 (36%), Gaps = 40/233 (17%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLI 90
+F IG GG V+K ++ V ++A R E AL + H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 91 KIITICSSIDF---------EGFDFKA---------------IVFEYMQNRNLEQWLRQS 126
D+ E D+ I E+ LEQW+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 127 NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
G+ + + ++ ++Y H ++H DLKPSNI L +GD GL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-- 183
Query: 187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
T+ + KG + Y++PE D+Y G++L E+
Sbjct: 184 -------TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR--------FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR + L + + +A +
Sbjct: 81 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + + ET
Sbjct: 136 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXXR 184
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR--------FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR + L + + +A +
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH DL N ++ D +GD G+ + + ET
Sbjct: 139 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--------XETDXXR 187
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SVHAPSSRRT 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
++ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+E+ H Q +I++ DLKP N+LLD D + DLGLA L A +T +
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------KAGQTKTKG--Y 349
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G G++APE +G + S D + G+ L EM R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+E+ H Q +I++ DLKP N+LLD D + DLGLA L A +T +
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------KAGQTKTKG--Y 349
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
G G++APE +G + S D + G+ L EM R P A
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 67 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SVHAPSSRRT 165
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
++ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 166 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 225
Query: 263 LPDKVME 269
PD V E
Sbjct: 226 FPDFVTE 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 36/271 (13%)
Query: 4 AHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV 63
A K N S K+Q+ A +F +G+G VY +S+ I+A+KV+
Sbjct: 18 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 64 ---NLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
L++ E ++RH N++++ + F V+ ++ L
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL--------YGYFHDATRVYLILEYAPLG 119
Query: 121 QWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
R+ +F QR I +++ A+ Y H ++H D+KP N+LL G
Sbjct: 120 TVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL-----GSAG 171
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
+L +A FG+ + +S ++ G + Y+ PE G D+++ G+L E
Sbjct: 172 ELKIAD--FGW---SVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 226
Query: 240 TRRRPTDA-MFNEGLTLHEFVKMALPDKVME 269
+ P +A + E V+ PD V E
Sbjct: 227 VGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SVHAPSSRRT 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
++ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+E+ H Q +I++ DLKP N+LLD D + DLGLA L A +T +
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------KAGQTKTKG--Y 349
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
G G++APE +G + S D + G+ L EM R P A
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 36/271 (13%)
Query: 4 AHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV 63
A K N S K+Q+ A +F +G+G VY +S+ I+A+KV+
Sbjct: 9 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 58
Query: 64 ---NLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
L++ E ++RH N++++ + F V+ ++ L
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL--------YGYFHDATRVYLILEYAPLG 110
Query: 121 QWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
R+ +F QR I +++ A+ Y H ++H D+KP N+LL G
Sbjct: 111 TVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLL-----GSAG 162
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
+L +A F + ++ T + G + Y+ PE G D+++ G+L E
Sbjct: 163 ELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 217
Query: 240 TRRRPTDA-MFNEGLTLHEFVKMALPDKVME 269
+ P +A + E V+ PD V E
Sbjct: 218 VGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 11/99 (11%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+E+ H Q +I++ DLKP N+LLD D + DLGLA L A +T +
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL------KAGQTKTKG--Y 349
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G G++APE +G + S D + G+ L EM R P
Sbjct: 350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 106/275 (38%), Gaps = 67/275 (24%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS-FAAECNALRNI 84
S+ +F P +G+GG +V++ A+K + L +E +R E AL +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 85 RHRNLIKI-----------------------------ITICSSIDFEGFDFKAI------ 109
H +++ ++ S +D + +
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 110 ------------VFEYMQ-----NRNLEQWL-RQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
V+ Y+Q NL+ W+ R+ + + R ++I I ++ A+E+ H
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE-------PGTAAETASNSIE 204
++H DLKPSNI D V VGD GL + E P A T +
Sbjct: 182 SK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV- 237
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
G Y++PE G+ S D+++ G++L E+
Sbjct: 238 --GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 71 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SVHAPSSRRT 169
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
++ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 170 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 263 LPDKVME 269
PD V E
Sbjct: 230 FPDFVTE 236
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ F ++ EY + + L++ + +F QR I ++
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLS---KFDEQRTATYITEL 122
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRX 169
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 263 LPDKVME 269
PD V E
Sbjct: 230 FPDFVTE 236
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 100/237 (42%), Gaps = 27/237 (11%)
Query: 38 IGQGGVSIVYKG--ILDESRSIVAVKVVNLKQKE----ASRSFAAECNALRNIRHRNLIK 91
IG GG VY+ I DE VAVK E + E ++H N+I
Sbjct: 15 IGIGGFGKVYRAFWIGDE----VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+ +C +V E+ + L + L L VN A+ ++ + Y H
Sbjct: 71 LRGVCLK-----EPNLCLVMEFARGGPLNRVLSGKRIPPDIL---VNWAVQIARGMNYLH 122
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET-ASNSIEIKGIVG 210
I+H DLK SNIL+ Q + GDL K L + G A E + + G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKV--ENGDLS-NKILKITDFGLAREWHRTTKMSAAGAYA 179
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFV---KMALP 264
++APE S S DV+++G+LL E+ T P + +GL + V K+ALP
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DGLAVAYGVAMNKLALP 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 40/254 (15%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKE-----ASRSFAAECNALRNIRH 86
+S +IG GG S V++ +L+E + I A+K VNL++ + + R+ A N L+ +H
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 86
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA 146
+ KII + D+E D + N +L WL++ + +R + ++ A
Sbjct: 87 SD--KIIRL---YDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW--ERKSYWKNMLEA 139
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
+ H H IVH DLKP+N L+ D + + D G+A + +P + +
Sbjct: 140 VHTIHQH---GIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDXXXVVKDSQV--- 189
Query: 207 GIVGYVAPEYGMGSKASVSG-----------DVYNFGILLLEMFTRRRPTDAMFNEGLTL 255
G V Y+ PE +S DV++ G +L M + P + N+ L
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 256 HEFV----KMALPD 265
H + ++ PD
Sbjct: 250 HAIIDPNHEIEFPD 263
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 36/271 (13%)
Query: 4 AHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV 63
A K N S K+Q+ A +F +G+G VY +S+ I+A+KV+
Sbjct: 18 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 64 ---NLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
L++ E ++RH N++++ + F V+ ++ L
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRL--------YGYFHDATRVYLILEYAPLG 119
Query: 121 QWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
R+ +F QR I +++ A+ Y H ++H D+KP N+LL G
Sbjct: 120 TVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLL-----GSAG 171
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
+L +A FG+ + +S + G + Y+ PE G D+++ G+L E
Sbjct: 172 ELKIAD--FGW---SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 226
Query: 240 TRRRPTDA-MFNEGLTLHEFVKMALPDKVME 269
+ P +A + E V+ PD V E
Sbjct: 227 VGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 33/198 (16%)
Query: 58 VAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSS-IDFEGFDFKAIVFEY 113
VAVK++N ++ + E L+ RH ++IK+ + S+ DF +V EY
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF------FMVMEY 92
Query: 114 MQNRNLEQWL----RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNIL 169
+ L ++ R + R L Q++ A+D Y H H +VH DLKP N+L
Sbjct: 93 VSGGELFDYICKHGRVEEMEARRLFQQILSAVD------YCHRHM---VVHRDLKPENVL 143
Query: 170 LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDV 228
LD + A + D GL+ + + E +S G Y APE G A D+
Sbjct: 144 LDAHMNAKIADFGLSNMM------SDGEFLRDSC---GSPNYAAPEVISGRLYAGPEVDI 194
Query: 229 YNFGILLLEMFTRRRPTD 246
++ G++L + P D
Sbjct: 195 WSCGVILYALLCGTLPFD 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 58 VAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSS-IDFEGFDFKAIVFEY 113
VAVK++N ++ + E L+ RH ++IK+ + S+ DF +V EY
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF------FMVMEY 92
Query: 114 MQNRNLEQWL----RQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNIL 169
+ L ++ R + R L Q++ A+D Y H H +VH DLKP N+L
Sbjct: 93 VSGGELFDYICKHGRVEEMEARRLFQQILSAVD------YCHRHM---VVHRDLKPENVL 143
Query: 170 LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS-KASVSGDV 228
LD + A + D GL+ + G T+ S Y APE G A D+
Sbjct: 144 LDAHMNAKIADFGLSNMM---SDGEFLRTSCGS------PNYAAPEVISGRLYAGPEVDI 194
Query: 229 YNFGILLLEMFTRRRPTD 246
++ G++L + P D
Sbjct: 195 WSCGVILYALLCGTLPFD 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 15/211 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIGQG V+K ++ VA+K V ++ ++ A E L+ ++H N++ +I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 95 ICSSIDFEGFDFKA---IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + KA +VF++ ++ +L L SN ++F + + + Y+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
H + I+H D+K +N+L+ +D V + D GLA+ F + N + + Y
Sbjct: 142 HRNK--ILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPNRYXNRVV---TLWY 195
Query: 212 VAPEYGMGSKA-SVSGDVYNFGILLLEMFTR 241
PE +G + D++ G ++ EM+TR
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 67 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADF--GW---SCHAPSSRRT 165
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 166 TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 225
Query: 263 LPDKVME 269
PD V E
Sbjct: 226 FPDFVTE 232
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 71 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ T
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 171 -LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 263 LPDKVME 269
PD V E
Sbjct: 230 FPDFVTE 236
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 110
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 111 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 168 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 223 VTAMLEKGERMGCP 236
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
+G G S V ++ +VA+K + K E S E L I+H N++ + I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S + + + +R +E+ R + Q ++ A++Y H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYLH---DL 135
Query: 157 SIVHGDLKPSNIL---LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
IVH DLKP N+L LD+D + D GL+K +PG+ TA G GYVA
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC------GTPGYVA 186
Query: 214 PEYGMGSKASVSGDVYNFGIL 234
PE S + D ++ G++
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVI 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ F ++ EY + + L++ + +F QR I ++
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLS---KFDEQRTATYITEL 122
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ T
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 171 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 263 LPDKVME 269
PD V E
Sbjct: 230 FPDFVTE 236
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRD 167
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
++ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 168 DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 65 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 117 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 163
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 164 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 223
Query: 263 LPDKVME 269
PD V E
Sbjct: 224 FPDFVTE 230
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 21 SYAELSKATNNFSPAN------KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSF 74
S + T + +P + ++G G VYK E+ + A KV++ K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 75 AAECNALRNIRHRNLIKII-------TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQS 126
E + L + H N++K++ + I+F G A++ E LE+ L +S
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE------LERPLTES 135
Query: 127 NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
Q+ Q ++ A+ Y H + I+H DLK NIL D GD+ LA F
Sbjct: 136 QIQV-VCKQTLD-------ALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADF 179
Query: 187 LFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKA-----SVSGDVYNFGILLLEM 238
G +A+ +G ++APE M + DV++ GI L+EM
Sbjct: 180 ------GVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 239 FTRRRP 244
P
Sbjct: 234 AEIEPP 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 133 LTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEP 192
L++ A ++ +++ H IV+ DLK NILLD+D + D G+ K
Sbjct: 118 LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK------E 168
Query: 193 GTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ +N E G Y+APE +G K + S D ++FG+LL EM + P
Sbjct: 169 NMLGDAKTN--EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 167
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 71 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ T
Sbjct: 123 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRTT---- 170
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 171 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 229
Query: 263 LPDKVME 269
PD V E
Sbjct: 230 FPDFVTE 236
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 104/248 (41%), Gaps = 28/248 (11%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 67 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG-YEPGTAAETASNS 202
+ A+ Y H ++H D+KP N+LL G+L +A F + + P + +T
Sbjct: 119 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRDT---- 166
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKM 261
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 167 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF 224
Query: 262 ALPDKVME 269
PD V E
Sbjct: 225 TFPDFVTE 232
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 70 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 122 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 168
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 228
Query: 263 LPDKVME 269
PD V E
Sbjct: 229 FPDFVTE 235
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F G+ + +S
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANF--GW---SVHAPSSRRT 167
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 18/137 (13%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSN 167
++ +Y++ L LR+S RF A +V A+EY H I++ DLKP N
Sbjct: 83 MIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPEN 136
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGD 227
ILLD++ + D G AK++ + + G Y+APE + S D
Sbjct: 137 ILLDKNGHIKITDFGFAKYV-----------PDVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 228 VYNFGILLLEMFTRRRP 244
++FGIL+ EM P
Sbjct: 186 WWSFGILIYEMLAGYTP 202
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ T
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRTT---- 168
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 169 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRX 167
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 168 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 66 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 118 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRX 164
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 224
Query: 263 LPDKVME 269
PD V E
Sbjct: 225 FPDFVTE 231
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 68 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ T
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIANFGWSVHAPSSRRTT---- 167
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 168 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 226
Query: 263 LPDKVME 269
PD V E
Sbjct: 227 FPDFVTE 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 126
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 127 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 184 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 239 VTAMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 126
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 127 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 184 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 239 VTAMLEKGERMGCP 252
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 110
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 111 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 168 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 223 VTAMLEKGERMGCP 236
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 26/252 (10%)
Query: 23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECN 79
A+ A +F +G+G VY +S+ I+A+KV+ L++ E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++RH N++++ + F V+ ++ L R+ +F QR
Sbjct: 61 IQSHLRHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 140 AI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
I +++ A+ Y H ++H D+KP N+LL G+L +A FG+ +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAP 159
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHE 257
+S + G + Y+ PE G D+++ G+L E + P +A + E
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 258 FVKMALPDKVME 269
V+ PD V E
Sbjct: 220 RVEFTFPDFVTE 231
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 30/220 (13%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
+++ K+G+G S V++ I + V VK++ +K + E L N+R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLR--GG 91
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIE 148
IIT+ + A+VFE++ N + +Q + ++ +RF + A+D ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM- 150
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
I+H D+KP N+++D + + D GLA+F Y PG S KG
Sbjct: 151 --------GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKG 199
Query: 208 ---IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+V Y +Y + D+++ G +L M R+ P
Sbjct: 200 PELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR--------FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR + L + + +A +
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH +L N ++ D +GD G+ + ++ ET
Sbjct: 139 IADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--------ETDYYR 187
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 21 SYAELSKATNNFSPAN------KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSF 74
S + T + +P + ++G G VYK E+ + A KV++ K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 75 AAECNALRNIRHRNLIKII-------TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQS 126
E + L + H N++K++ + I+F G A++ E LE+ L +S
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE------LERPLTES 135
Query: 127 NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
Q+ Q ++ A+ Y H + I+H DLK NIL D GD+ LA F
Sbjct: 136 QIQV-VCKQTLD-------ALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADF 179
Query: 187 LFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKA-----SVSGDVYNFGILLLEM 238
G +A+ +G ++APE M + DV++ GI L+EM
Sbjct: 180 ------GVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 239 FTRRRP 244
P
Sbjct: 234 AEIEPP 239
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 106
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 107 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 164 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 219 VTAMLEKGERMGCP 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 124
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 125 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 182 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 237 VTAMLEKGERMGCP 250
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 104
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 105 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 162 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 217 VTAMLEKGERMGCP 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 33/232 (14%)
Query: 37 KIGQGGVSIVYKG-----ILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLI 90
++GQG +VY+G I E+ + VAVK VN R F E + ++ +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLR---FLTQRVNIAID 142
+++ + S +V E M + +L+ +LR N R L + + +A +
Sbjct: 85 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y + VH +L N ++ D +GD G+ + ++ ET
Sbjct: 140 IADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY--------ETDYYR 188
Query: 203 IEIKGI--VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAMFNE 251
KG+ V ++APE + S D+++FG++L E+ + +P + NE
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 116
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 117 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 174 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 229 VTAMLEKGERMGCP 242
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 68 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 120 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRX 166
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 167 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 226
Query: 263 LPDKVME 269
PD V E
Sbjct: 227 FPDFVTE 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGIL--DESRSIVAVK-VVNLKQKEASRSFAAECNALRNI-R 85
N+ + IG+G V K + D R A+K + K+ R FA E L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS------------NGQLRFL 133
H N+I ++ C + G+ + AI EY + NL +LR+S N L
Sbjct: 75 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 134 T--QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
+ Q ++ A DV+ ++Y Q +H DL NIL+ ++ VA + D GL++ Y
Sbjct: 130 SSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
T V ++A E S + + DV+++G+LL E+ +
Sbjct: 187 KKTMGRLP---------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY +S+ I+A+KV+ L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 69 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A F + ++ A
Sbjct: 121 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIADFGWSVHAPSSRRAA---- 168
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 169 -LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 227
Query: 263 LPDKVME 269
PD V E
Sbjct: 228 FPDFVTE 234
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGIL--DESRSIVAVK-VVNLKQKEASRSFAAECNALRNI-R 85
N+ + IG+G V K + D R A+K + K+ R FA E L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS------------NGQLRFL 133
H N+I ++ C + G+ + AI EY + NL +LR+S N L
Sbjct: 85 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 134 T--QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
+ Q ++ A DV+ ++Y Q +H DL NIL+ ++ VA + D GL++ Y
Sbjct: 140 SSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
T V ++A E S + + DV+++G+LL E+ +
Sbjct: 197 KKTMGRLP---------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 38 IGQGG---VSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIK 91
+GQG V +V K ++R + A+KV+ LK ++ R+ E + L + H ++K
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVK 90
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSFAIEYF 150
+ + EG + ++ ++++ +L + + ++ F + V + +++ A+++
Sbjct: 91 L---HYAFQTEGKLY--LILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
H I++ DLKP NILLD++ + D GL+K +E + G V
Sbjct: 143 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------KKAYSFCGTVE 191
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE + S D ++FG+L+ EM T P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 50/246 (20%)
Query: 21 SYAELSKATNNFSPAN------KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSF 74
S + T + +P + ++G G VYK E+ + A KV++ K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 75 AAECNALRNIRHRNLIKII-------TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQS 126
E + L + H N++K++ + I+F G A++ E LE+ L +S
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE------LERPLTES 135
Query: 127 NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
Q+ Q ++ A+ Y H + I+H DLK NIL D GD+ LA F
Sbjct: 136 QIQV-VCKQTLD-------ALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADF 179
Query: 187 LFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKA-----SVSGDVYNFGILLLEM 238
G +A+ +G ++APE M + DV++ GI L+EM
Sbjct: 180 ------GVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 239 FTRRRP 244
P
Sbjct: 234 AEIEPP 239
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 468
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 469 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 526 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 581 VTAMLEKGERMGCP 594
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 28/243 (11%)
Query: 30 NNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRN 83
++F +GQG V +V K +S + A+KV+ LK ++ R+ E + L +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILAD 86
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-D 142
+ H ++K+ + EG + ++ ++++ +L + + ++ F + V + +
Sbjct: 87 VNHPFVVKL---HYAFQTEGKLY--LILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAE 138
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ +++ H I++ DLKP NILLD++ + D GL+K A + +
Sbjct: 139 LALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------EAIDHEKKA 187
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAM-FNEGLTLHEFVKM 261
G V Y+APE S S D +++G+L+ EM T P E +TL K+
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKL 247
Query: 262 ALP 264
+P
Sbjct: 248 GMP 250
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
AE N ++ + + ++++I IC + + +V E + L ++L+Q+ R +
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW------MLVMEMAELGPLNKYLQQN----RHVKD 469
Query: 136 R--VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
+ + + VS ++Y + + VH DL N+LL A + D GL+K L E
Sbjct: 470 KNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEG 252
A+T K V + APE K S DV++FG+L+ E F+ ++P M
Sbjct: 527 YKAQTHG-----KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
Query: 253 LT--LHEFVKMALP 264
+T L + +M P
Sbjct: 582 VTAMLEKGERMGCP 595
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIGQG V+K ++ VA+K V ++ ++ A E L+ ++H N++ +I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 95 ICSSIDFEGFDFKA---IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + K +VF++ ++ +L L SN ++F + + + Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
H + I+H D+K +N+L+ +D V + D GLA+ F + N + + Y
Sbjct: 142 HRNK--ILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPNRYXNRVV---TLWY 195
Query: 212 VAPEYGMGSKA-SVSGDVYNFGILLLEMFTR 241
PE +G + D++ G ++ EM+TR
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 30 NNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRN 83
+ F +GQG V +V K ++R + A+KV+ LK ++ R+ E + L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVE 83
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-D 142
+ H ++K+ + EG + ++ ++++ +L + + ++ F + V + +
Sbjct: 84 VNHPFIVKL---HYAFQTEGKLY--LILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAE 135
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ A+++ H I++ DLKP NILLD++ + D GL+K + + +
Sbjct: 136 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------ESIDHEKKA 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G V Y+APE + S D ++FG+L+ EM T P
Sbjct: 185 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
+G G S V ++ +VA+K + + E S E L I+H N++ + I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S + + + +R +E+ R + Q ++ A++Y H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYLH---DL 135
Query: 157 SIVHGDLKPSNIL---LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
IVH DLKP N+L LD+D + D GL+K +PG+ TA G GYVA
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC------GTPGYVA 186
Query: 214 PEYGMGSKASVSGDVYNFGIL 234
PE S + D ++ G++
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVI 207
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 27/222 (12%)
Query: 30 NNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRN 83
+ F +GQG V +V K ++R + A+KV+ LK ++ R+ E + L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVE 82
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-D 142
+ H ++K+ + EG + ++ ++++ +L + + ++ F + V + +
Sbjct: 83 VNHPFIVKL---HYAFQTEGKLY--LILDFLRGGDL---FTRLSKEVMFTEEDVKFYLAE 134
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ A+++ H I++ DLKP NILLD++ + D GL+K + + +
Sbjct: 135 LALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------ESIDHEKKA 183
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G V Y+APE + S D ++FG+L+ EM T P
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIGQG V+K ++ VA+K V ++ ++ A E L+ ++H N++ +I
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 95 ICSSIDFEGFDFKA---IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + K +VF++ ++ +L L SN ++F + + + Y+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
H + I+H D+K +N+L+ +D V + D GLA+ F + N + + Y
Sbjct: 141 HRNK--ILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPNRYXNRV---VTLWY 194
Query: 212 VAPEYGMGSKA-SVSGDVYNFGILLLEMFTR 241
PE +G + D++ G ++ EM+TR
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
+G G S V ++ +VA+K + + E S E L I+H N++ + I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S + + + +R +E+ R + Q ++ A++Y H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYLH---DL 135
Query: 157 SIVHGDLKPSNIL---LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
IVH DLKP N+L LD+D + D GL+K +PG+ TA G GYVA
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC------GTPGYVA 186
Query: 214 PEYGMGSKASVSGDVYNFGIL 234
PE S + D ++ G++
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
+G G S V ++ +VA+K + + E S E L I+H N++ + I
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S + + + +R +E+ R + Q ++ A++Y H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVKYLH---DL 135
Query: 157 SIVHGDLKPSNIL---LDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
IVH DLKP N+L LD+D + D GL+K +PG+ TA G GYVA
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTAC------GTPGYVA 186
Query: 214 PEYGMGSKASVSGDVYNFGIL 234
PE S + D ++ G++
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVI 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 128 GQLRFLTQR-VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
GQ F R V A ++ +E H IV+ DLKP NILLD + DLGLA
Sbjct: 279 GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 335
Query: 187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ +T + G VGY+APE + + S D + G LL EM + P
Sbjct: 336 V------PEGQTIKGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA--ECNALRNIRHRNLIKIIT 94
KIGQG V+K ++ VA+K V ++ ++ A E L+ ++H N++ +I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 95 ICSSIDFEGFDFKA---IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
IC + K +VF++ ++ +L L SN ++F + + + Y+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGY 211
H + I+H D+K +N+L+ +D V + D GLA+ F + N + + Y
Sbjct: 142 HRNK--ILHRDMKAANVLITRDGVLKLADFGLAR-AFSLAKNSQPNRYXNRVV---TLWY 195
Query: 212 VAPEYGMGSKA-SVSGDVYNFGILLLEMFTR 241
PE +G + D++ G ++ EM+TR
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 46/219 (21%)
Query: 38 IGQ-GGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKII--- 93
IG+ G VYK E+ + A KV++ K +E + E + L + H N++K++
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 94 ----TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
+ I+F G A++ E LE+ L +S Q+ Q ++ A+
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLE------LERPLTESQIQV-VCKQTLD-------ALN 122
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK-- 206
Y H + I+H DLK NIL D GD+ LA F G +A+ I+ +
Sbjct: 123 YLHDN---KIIHRDLKAGNILFTLD-----GDIKLADF------GVSAKNTRTXIQRRDS 168
Query: 207 --GIVGYVAPEYGMGSKA-----SVSGDVYNFGILLLEM 238
G ++APE M + DV++ GI L+EM
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 13/118 (11%)
Query: 128 GQLRFLTQR-VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
GQ F R V A ++ +E H IV+ DLKP NILLD + DLGLA
Sbjct: 279 GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVH 335
Query: 187 LFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ +T + G VGY+APE + + S D + G LL EM + P
Sbjct: 336 V------PEGQTIKGRV---GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 32/200 (16%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + ++ EY
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYAS 117
Query: 116 NRNLEQWL--RQSNGQLRF-----------LTQR--VNIAIDVSFAIEYFHHHCQPSIVH 160
NL ++L R+ G L F L+ + V+ A V+ +EY +H
Sbjct: 118 KGNLREYLQARRPPG-LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIH 173
Query: 161 GDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS 220
DL N+L+ +D V + D GLA+ + + +T + + +K ++APE
Sbjct: 174 RDLAARNVLVTEDNVMKIADFGLARDIHHID--XXKKTTNGRLPVK----WMAPEALFDR 227
Query: 221 KASVSGDVYNFGILLLEMFT 240
+ DV++FG+LL E+FT
Sbjct: 228 IYTHQSDVWSFGVLLWEIFT 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 102/245 (41%), Gaps = 26/245 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNIRH 86
+F +G+G VY +S+ I+A+KV+ L++ E ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSF 145
N++++ + F V+ ++ L R+ RF QR I +++
Sbjct: 72 PNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
A+ Y H ++H D+KP N+LL + G+L +A FG+ + +S +
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSN-----GELKIAD--FGW---SVHAPSSRRTTL 170
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMALP 264
G + Y+ PE G D+++ G+L E P +A + E V+ P
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP 230
Query: 265 DKVME 269
D V E
Sbjct: 231 DFVTE 235
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK+++ Q +S + E ++ + H N++K+ + I+ E + +V EY
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV---IETEKTLY--LVMEYAS 96
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F FG + T G Y APE G K DV++ G+
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 202 ILYTLVSGSLPFDG 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK+++ Q +S + E ++ + H N++K+ + I+ E + +V EY
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV---IETEKTLY--LVMEYAS 96
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F FG + T G Y APE G K DV++ G+
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 202 ILYTLVSGSLPFDG 215
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 104
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 105 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 161
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 215
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 216 HQSDVWSFGVLLWEIFT 232
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 26/247 (10%)
Query: 28 ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNI 84
A +F +G+G VY + + I+A+KV+ L++ E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DV 143
RH N++++ + F V+ ++ L R+ +F QR I ++
Sbjct: 63 RHPNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL G+L +A FG+ + +S
Sbjct: 115 ANALSYCH---SKRVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAPSSRRT 161
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMA 262
+ G + Y+ PE G D+++ G+L E + P +A + E V+
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT 221
Query: 263 LPDKVME 269
PD V E
Sbjct: 222 FPDFVTE 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 119
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 120 NLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 230
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 28/246 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNIRH 86
+F +G+G VY +S+ I+A+KV+ L++ E ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSF 145
N++++ + F V+ ++ L R+ RF QR I +++
Sbjct: 72 PNILRL--------YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG-YEPGTAAETASNSIE 204
A+ Y H ++H D+KP N+LL + G+L +A F + + P + +T
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRDT------ 169
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHEFVKMAL 263
+ G + Y+ PE G D+++ G+L E P +A + E V+
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 264 PDKVME 269
PD V E
Sbjct: 230 PDFVTE 235
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
+ ++S A+ Y H I++ DLK N+LLD + + D G+ K G PG T
Sbjct: 159 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSTF 213
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
G Y+APE G S D + G+L+ EM R P D
Sbjct: 214 C------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 119
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 120 NLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 230
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 111
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 112 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 168
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 169 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 222
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 223 HQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 119
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 120 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 230
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 231 HQSDVWSFGVLLWEIFT 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 133 LTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEP 192
L++ A ++ +++ H IV+ DLK NILLD+D + D G+ K
Sbjct: 117 LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK------E 167
Query: 193 GTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ +N G Y+APE +G K + S D ++FG+LL EM + P
Sbjct: 168 NMLGDAKTNXF--CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 108
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 109 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 165
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 166 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 219
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 220 HQSDVWSFGVLLWEIFT 236
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 40 QGGVSIVYKG-ILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI--- 95
+G V+K +L+E VAVK+ ++ K++ ++ E +L ++H N+++ I
Sbjct: 34 RGRFGCVWKAQLLNE---YVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKR 89
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+S+D + + ++ + + +L +L+ + + +IA ++ + Y H
Sbjct: 90 GTSVDVDLW----LITAFHEKGSLSDFLK---ANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 155 ------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
+P+I H D+K N+LL ++ A + D GLA +E G +A + G
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA---LKFEAGKSAGDTHGQV---GT 196
Query: 209 VGYVAPEYGMGS-----KASVSGDVYNFGILLLEMFTRRRPTDAMFNE 251
Y+APE G+ A + D+Y G++L E+ +R D +E
Sbjct: 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 26/252 (10%)
Query: 23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECN 79
A+ A +F +G+G VY S+ I+A+KV+ L++ E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
++RH N++++ + F V+ ++ L R+ +F QR
Sbjct: 61 IQSHLRHPNILRL--------YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 140 AI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
I +++ A+ Y H ++H D+KP N+LL G+L +A FG+ +
Sbjct: 113 YITELANALSYCH---SKKVIHRDIKPENLLL-----GSAGELKIAD--FGW---SVHAP 159
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA-MFNEGLTLHE 257
+S + G + Y+ PE G D+++ G+L E + P +A + +
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
Query: 258 FVKMALPDKVME 269
V+ PD V E
Sbjct: 220 RVEFTFPDFVTE 231
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 58 VAVKVVNLKQKEASRS-FAAECNALRNI-RHRNLIKIITICSSIDFEG-------FDFKA 108
VAVK++ E S +E ++ I +H+N+I ++ C+ +G + K
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYVIVEYASKG 112
Query: 109 IVFEYMQNRN---LEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQPSIVHGDL 163
+ EY+Q R LE S+ L+ + V+ A V+ +EY +H DL
Sbjct: 113 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 169
Query: 164 KPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS 223
N+L+ +D V + D GLA+ + + +T + + +K ++APE +
Sbjct: 170 AARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPEALFDRIYT 223
Query: 224 VSGDVYNFGILLLEMFT 240
DV++FG+LL E+FT
Sbjct: 224 HQSDVWSFGVLLWEIFT 240
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGIL-DESRSIVAVKVVNLKQKEASRS----FAAECNALRNI 84
F+ +G+G V + L E S V V V LK + S F E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 85 RHRNLIKIITICSSIDFEG-FDFKAIVFEYMQNRNLEQWLRQSN-GQLRF---LTQRVNI 139
H ++ K++ + +G ++ +M++ +L +L S G+ F L V
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG---YEPGTAA 196
+D++ +EY + +H DL N +L +D+ V D GL++ ++ Y G A+
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 197 ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTR 241
+ V ++A E + +V DV+ FG+ + E+ TR
Sbjct: 200 KLP---------VKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR----SFAAECNALRNIRHRNLIKI 92
K+G G V+ L E RS +V+ K+ S+ AE L+++ H N+IKI
Sbjct: 29 KLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYF 150
+ FE + IV E + L + + + + + L++ + + A+ YF
Sbjct: 86 FEV-----FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAH----VGDLGLAKFLFGYEPGTAAETASNSIEIK 206
H +VH DLKP NIL QD H + D GLA+ E T A
Sbjct: 141 HSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNA---------A 187
Query: 207 GIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
G Y+APE + D+++ G+++ + T
Sbjct: 188 GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLT 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 28/205 (13%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEG---- 103
D+ + V V LK + + +E ++ I +H+N+I ++ C+ +G
Sbjct: 96 DKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ---DGPLYV 152
Query: 104 ---FDFKAIVFEYMQNR---NLEQWLRQSNGQLRFLTQR--VNIAIDVSFAIEYFHHHCQ 155
+ K + EY+Q R LE S+ L+ + V+ A V+ +EY
Sbjct: 153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---AS 209
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+H DL N+L+ +D V + D GLA+ + + +T + + +K ++APE
Sbjct: 210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID--YYKKTTNGRLPVK----WMAPE 263
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
+ DV++FG+LL E+FT
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 24/221 (10%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRHRN 88
N+ IG+G + V + VAVK+++ Q +S + E ++ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
++K+ + I+ E + +V EY + +L ++G ++ R VS A++
Sbjct: 68 IVKLFEV---IETEKTLY--LVMEYASGGEVFDYL-VAHGWMKEKEARAKFRQIVS-AVQ 120
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASNSIEIKG 207
Y H Q IVH DLK N+LLD D+ + D G + +F FG + T G
Sbjct: 121 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC----------G 167
Query: 208 IVGYVAPEYGMGSKAS-VSGDVYNFGILLLEMFTRRRPTDA 247
Y APE G K DV++ G++L + + P D
Sbjct: 168 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 29/238 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + VAVK ++L++++ E +R+ H N++ + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS-- 109
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ Y H+
Sbjct: 110 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIATVCLSVLRALSYLHNQ--- 160
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + + K +VG ++A
Sbjct: 161 GVIHRDIKSDSILLTSD-----GRIKLSDF------GFCAQVSKEVPKRKXLVGTPYWMA 209
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI 270
PE D+++ GI+++EM P FNE L ++ +LP +V ++
Sbjct: 210 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPP---YFNEPPLQAMRRIRDSLPPRVKDL 264
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
++ V D G+A+ + + + + + + G Y++PE G DV
Sbjct: 148 MISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 74 FAAECNALRNIRHRNLIK----IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ 129
+E N LR ++H N+++ II ++ + IV EY + +L + + +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 130 LRFLTQR--VNIAIDVSFAIEYFHHHCQP--SIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
++L + + + ++ A++ H +++H DLKP+N+ LD +GD GLA+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
L + E G Y++PE + D+++ G LL E+
Sbjct: 165 IL--------NHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
++ V D G+A+ + + + + + + G Y++PE G DV
Sbjct: 148 MISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
++ V D G+A+ + + + + + + G Y++PE G DV
Sbjct: 148 MISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRHRN 88
N+ IG+G + V + VAVK+++ Q +S + E ++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
++K+ + I+ E + +V EY + +L ++G+++ R VS A++
Sbjct: 75 IVKLFEV---IETEKTLY--LVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQ 127
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASNSIE-IK 206
Y H Q IVH DLK N+LLD D+ + D G + +F FG N ++
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFG-----------NKLDAFC 173
Query: 207 GIVGYVAPEYGMGSKAS-VSGDVYNFGILLLEMFTRRRPTDA 247
G Y APE G K DV++ G++L + + P D
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
L+ V D G+A+ + + + + + G Y++PE G DV
Sbjct: 148 LISATNAVKVVDFGIARAI-----ADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 93 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
++ V D G+A+ + + + + + + G Y++PE G DV
Sbjct: 148 MISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAV++++ Q +S + E ++ + H N++K+ + I+ E + +V EY
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV---IETEKTLY--LVMEYAS 96
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F FG + T G Y APE G K DV++ G+
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 202 ILYTLVSGSLPFDG 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 35/229 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGIL--DESRSIVAVK-VVNLKQKEASRSFAAECNALRNI-R 85
N+ + IG+G V K + D R A+K + K+ R FA E L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS------------NGQLRFL 133
H N+I ++ C + G+ + AI EY + NL +LR+S N L
Sbjct: 82 HPNIINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 134 T--QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
+ Q ++ A DV+ ++Y Q +H +L NIL+ ++ VA + D GL++ Y
Sbjct: 137 SSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
T V ++A E S + + DV+++G+LL E+ +
Sbjct: 194 KKTMGRLP---------VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ ++IG+G VYKGI + ++ +VA+K+++L++ E + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-----------IT 69
Query: 92 IITICSS---IDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K+ I+ EY+ + L+ + ++ I ++
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI---ATILREIL 126
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + GD+ LA F G A + I+
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQ-----GDVKLADF------GVAGQLTDTQIK 172
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEM 238
VG ++APE S D+++ GI +E+
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
IV EY+ L + + G + + + + D A+ + H Q I+H D+KP+NI
Sbjct: 110 IVMEYVDGVTLRDIV-HTEGPM-TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 164
Query: 169 LLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDV 228
++ V D G+A+ + + + + + + G Y++PE G DV
Sbjct: 165 MISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 229 YNFGILLLEMFTRRRP 244
Y+ G +L E+ T P
Sbjct: 220 YSLGCVLYEVLTGEPP 235
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAV++++ Q +S + E ++ + H N++K+ + I+ E + +V EY
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV---IETEKTLY--LVMEYAS 96
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F FG + E G Y APE G K DV++ G+
Sbjct: 152 IKIADFGFSNEFTFG----------NKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 202 ILYTLVSGSLPFDG 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 48/242 (19%)
Query: 30 NNFSPANKIGQGGVSIVYK----GILD-ESRSIVAVKVVNLKQKEASRS----FAAECNA 80
NN IG+G V++ G+L E ++VAVK++ ++EAS F E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKML---KEEASADMQADFQREAAL 103
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ--------------- 125
+ + N++K++ +C+ ++FEYM +L ++LR
Sbjct: 104 MAEFDNPNIVKLLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLS 158
Query: 126 ------SNGQLRF-LTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV 178
S G +++ IA V+ + Y VH DL N L+ +++V +
Sbjct: 159 TRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKI 215
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
D GL++ ++ + A +++I I+ ++ PE ++ + DV+ +G++L E+
Sbjct: 216 ADFGLSRNIYSADYYKA--DGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEI 269
Query: 239 FT 240
F+
Sbjct: 270 FS 271
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL---------KQKEASRSFAAECNA 80
N+ P +G+G S+V + I + AVK++++ + +E + E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 81 LRNIR-HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
LR + H N+I++ +E F +VF+ M+ L +L + T+++
Sbjct: 77 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 140 AI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+ +V A+ +IVH DLKP NILLD D+ + D G + L +PG
Sbjct: 132 ALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLR- 181
Query: 199 ASNSIEIKGIVGYVAPE 215
E+ G Y+APE
Sbjct: 182 -----EVCGTPSYLAPE 193
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--XXKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--XXKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
+++G+G V Y + D + ++VAVK + + R F E L+ + ++K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+ G +V EY+ +G LR QR +D S + Y
Sbjct: 76 YRGVSYG---PGRQSLRLVMEYL-----------PSGCLRDFLQRHRARLDASRLLLYSS 121
Query: 152 HHCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL-------FGYEPGTAAE 197
C+ VH DL NIL++ + + D GLAK L EPG +
Sbjct: 122 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP- 180
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE + S DV++FG++L E+FT
Sbjct: 181 -----------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
+++G+G V Y + D + ++VAVK + + R F E L+ + ++K
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+ G +V EY+ +G LR QR +D S + Y
Sbjct: 73 YRGVSYG---PGRPELRLVMEYL-----------PSGCLRDFLQRHRARLDASRLLLYSS 118
Query: 152 HHCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL-------FGYEPGTAAE 197
C+ VH DL NIL++ + + D GLAK L EPG +
Sbjct: 119 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP- 177
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE + S DV++FG++L E+FT
Sbjct: 178 -----------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 74 FAAECNALRNIRHRNLIK----IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ 129
+E N LR ++H N+++ II ++ + IV EY + +L + + +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 130 LRFLTQR--VNIAIDVSFAIEYFHHHCQP--SIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
++L + + + ++ A++ H +++H DLKP+N+ LD +GD GLA+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
L S + G Y++PE + D+++ G LL E+
Sbjct: 165 IL--------NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 116/243 (47%), Gaps = 25/243 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
++ P ++G+G G++++ R + + +++ +K+ A+ + + L ++
Sbjct: 51 DDLEPIMELGRGAY-----GVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-- 103
Query: 90 IKIITICSSIDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
++ + ++ F G F+ I E M + +L+++ +Q + + + + + I VS
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
H H + S++H D+KPSN+L++ + D G++ +L ++ + +I+
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--------VDSVAKTID- 213
Query: 206 KGIVGYVAPEY---GMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM 261
G Y+APE + K SV D+++ GI ++E+ R P D+ L + V+
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
Query: 262 ALP 264
P
Sbjct: 274 PSP 276
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
+++G+G V Y + D + ++VAVK + + R F E L+ + ++K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+ G +V EY+ +G LR QR +D S + Y
Sbjct: 77 YRGVSYG---PGRQSLRLVMEYL-----------PSGCLRDFLQRHRARLDASRLLLYSS 122
Query: 152 HHCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL-------FGYEPGTAAE 197
C+ VH DL NIL++ + + D GLAK L EPG +
Sbjct: 123 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP- 181
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE + S DV++FG++L E+FT
Sbjct: 182 -----------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 36 NKIGQGGVSIV----YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
+++G+G V Y + D + ++VAVK + + R F E L+ + ++K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
+ G +V EY+ +G LR QR +D S + Y
Sbjct: 89 YRGVSYG---PGRQSLRLVMEYL-----------PSGCLRDFLQRHRARLDASRLLLYSS 134
Query: 152 HHCQ-------PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL-------FGYEPGTAAE 197
C+ VH DL NIL++ + + D GLAK L EPG +
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP- 193
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ + APE + S DV++FG++L E+FT
Sbjct: 194 -----------IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 74 FAAECNALRNIRHRNLIK----IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQ 129
+E N LR ++H N+++ II ++ + IV EY + +L + + +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 130 LRFLTQR--VNIAIDVSFAIEYFHHHCQP--SIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
++L + + + ++ A++ H +++H DLKP+N+ LD +GD GLA+
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
L S + G Y++PE + D+++ G LL E+
Sbjct: 165 IL--------NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL---------KQKEASRSFAAECNA 80
N+ P +G+G S+V + I + AVK++++ + +E + E +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 81 LRNIR-HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
LR + H N+I++ +E F +VF+ M+ L +L + T+++
Sbjct: 64 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 140 AI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+ +V A+ +IVH DLKP NILLD D+ + D G + L +PG
Sbjct: 119 ALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLR- 168
Query: 199 ASNSIEIKGIVGYVAPE 215
E+ G Y+APE
Sbjct: 169 -----EVCGTPSYLAPE 180
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 116 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+Y + +H D+ N LL VA +GD G+A+ + Y G + +
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAML 225
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+K ++ PE M + D ++FG+LL E+F+
Sbjct: 226 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 84
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 85 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIAAVCLAVLQALSVLHAQ--- 135
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 136 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 241
Query: 271 VDPSL 275
V PSL
Sbjct: 242 VSPSL 246
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN 88
T+ + IG G S+ + I + AVK+++ +++ + LR +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQHPN 77
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNL-EQWLRQSNGQLRFLTQRVNIAI--DVSF 145
+I + + ++ + +V E M+ L ++ LRQ +F ++R A+ ++
Sbjct: 78 IITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQ-----KFFSEREASAVLFTITK 127
Query: 146 AIEYFHHHCQPSIVHGDLKPSNIL-LDQD---IVAHVGDLGLAKFLFGYEPG---TAAET 198
+EY H +VH DLKPSNIL +D+ + D G AK L E G T T
Sbjct: 128 TVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLMTPCYT 183
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A+ +VAPE + D+++ G+LL M T P
Sbjct: 184 AN----------FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + N+ + V ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDI------NNIDYYKNTTNGRLPVKWM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 88
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 89 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIAAVCLAVLQALSVLHAQ--- 139
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 140 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 245
Query: 271 VDPSL 275
V PSL
Sbjct: 246 VSPSL 250
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 7 DSNMLSMKQQFPMISYAELSKATNNFSPANKIGQG--GVSIVYKGI---LDESRSIVAVK 61
D+ ML+ ++ + + + + +G+G G ++ + + D+ + V V
Sbjct: 58 DTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 117
Query: 62 VVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNR 117
V LK + + +E ++ I +H+N+I ++ C+ +G + ++ EY
Sbjct: 118 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 172
Query: 118 NLEQWLRQSNG---------------QLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD 162
NL ++LR Q+ F V+ ++ +EY +H D
Sbjct: 173 NLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLASQ---KCIHRD 228
Query: 163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA 222
L N+L+ ++ V + D GLA+ + + +T + + +K ++APE
Sbjct: 229 LAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WMAPEALFDRVY 282
Query: 223 SVSGDVYNFGILLLEMFT 240
+ DV++FG+L+ E+FT
Sbjct: 283 THQSDVWSFGVLMWEIFT 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 139 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+Y + +H D+ N LL VA +GD G+A+ + Y G + +
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI--YRAGYYRKGGCAML 248
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+K ++ PE M + D ++FG+LL E+F+
Sbjct: 249 PVK----WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIGQG VY + + VA++ +NL+Q+ E +R ++ N++ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 84
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ D +V EY+ +L + ++ GQ+ + + + A+E+ H +
Sbjct: 85 ---SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN 135
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
++H D+K NILL D + D FG+ E + S E+ G ++A
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTD-------FGFCAQITPEQSKRS-EMVGTPYWMA 184
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE D+++ GI+ +EM P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 40/240 (16%)
Query: 56 SIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYM 114
+ VAVK++ + R +E N L+ + H ++IK+ CS +G ++ EY
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYA 108
Query: 115 QNRNLEQWLRQSN----GQLRFLTQRVNIAID------------VSFAIEY---FHHHCQ 155
+ +L +LR+S G L R + ++D +SFA + + +
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
S+VH DL NIL+ + + D GL++ + YE + + + I +K ++A E
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSRDV--YEEDSXVKRSQGRIPVK----WMAIE 222
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR------PTDAMFNEGLTLHEFVKMALPDKVME 269
+ DV++FG+LL E+ T P + +FN T H +M PD E
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH---RMERPDNCSE 279
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 93
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 94 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIAAVCLAVLQALSVLHAQ--- 144
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 145 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 250
Query: 271 VDPSL 275
V PSL
Sbjct: 251 VSPSL 255
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 39/258 (15%)
Query: 7 DSNMLSMKQQFPMISYAELSKATNNFSPANKIGQG--GVSIVYKGI---LDESRSIVAVK 61
D+ ML+ ++ + + + + +G+G G ++ + + D+ + V V
Sbjct: 4 DTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVA 63
Query: 62 VVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNR 117
V LK + + +E ++ I +H+N+I ++ C+ +G + ++ EY
Sbjct: 64 VKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKG 118
Query: 118 NLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD 162
NL ++LR Q+ F V+ ++ +EY +H D
Sbjct: 119 NLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLASQ---KCIHRD 174
Query: 163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA 222
L N+L+ ++ V + D GLA+ + + +T + + +K ++APE
Sbjct: 175 LAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WMAPEALFDRVY 228
Query: 223 SVSGDVYNFGILLLEMFT 240
+ DV++FG+L+ E+FT
Sbjct: 229 THQSDVWSFGVLMWEIFT 246
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
+IG+G V+ G + VAVKV +EAS E +RH N++ I
Sbjct: 43 KQIGKGRYGEVWMGKWRGEK--VAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFI-- 97
Query: 96 CSSIDFEG---FDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID--VSFAIEYF 150
+ D +G + ++ +Y +N +L +L+ + + + + ++ E F
Sbjct: 98 --AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASNSIEIK--- 206
+P+I H DLK NIL+ ++ + DLGLA KF+ + +N ++I
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI----------SDTNEVDIPPNT 205
Query: 207 --GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+ PE S ++ + D+Y+FG++L E+ R
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMRIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 95
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 96 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIAAVCLAVLQALSVLHAQ--- 146
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 147 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 252
Query: 271 VDPSL 275
V PSL
Sbjct: 253 VSPSL 257
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
+ ++S A+ Y H I++ DLK N+LLD + + D G+ K G PG
Sbjct: 127 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXF 181
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
G Y+APE G S D + G+L+ EM R P D
Sbjct: 182 C------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR----------H 86
K+G+G IV+K I + +VAVK + +F +A R R H
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKI-------FDAFQNSTDAQRTFREIMILTELSGH 68
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA 146
N++ ++ + + + +VF+YM+ +L +R + + + +
Sbjct: 69 ENIVNLLNVLRADNDRDV---YLVFDYMET-DLHAVIR---ANILEPVHKQYVVYQLIKV 121
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE------PGTAAETAS 200
I+Y H ++H D+KPSNILL+ + V D GL++ P + E
Sbjct: 122 IKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 201 NSIEIKGIVG-------YVAPEYGMGSKASVSG-DVYNFGILLLEMF 239
N + + I+ Y APE +GS G D+++ G +L E+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 49 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 104
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 105 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 162
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 163 Q---KCIHRDLTARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 213
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 214 APEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 51 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 106
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 107 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 164
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 165 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 215
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 216 APEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA----ECNALRNIRHRNLI 90
+ +G G V G + + VAVK++N +QK S E L+ RH ++I
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-----RFLTQRVNIAIDVSF 145
K+ + S+ + F +V EY+ L ++ + NG+L R L Q++ +D
Sbjct: 80 KLYQVISTPS-DIF----MVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVD--- 130
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
Y H H +VH DLKP N+LLD + A + D GL+ + + E S
Sbjct: 131 ---YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDGEFLRXSC-- 176
Query: 206 KGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEMFTRRRPTD 246
G Y APE G A D+++ G++L + P D
Sbjct: 177 -GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 92/226 (40%), Gaps = 32/226 (14%)
Query: 31 NFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALR---NIRHR 87
+F N +G+G + VY+ + VA+K+++ K + N ++ ++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ------SNGQLRFLTQRVNIAI 141
+++++ FE ++ +V E N + ++L+ N F+ Q +
Sbjct: 72 SILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT--- 123
Query: 142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASN 201
+ Y H H I+H DL SN+LL +++ + D GLA L
Sbjct: 124 ----GMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL--------KMPHEK 168
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
+ G Y++PE S + DV++ G + + R P D
Sbjct: 169 HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 209
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 210 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV--NLKQKEASRSFAAECNALRNIRHR 87
++ P ++G+G +V K S I+AVK + + +E R ++R +
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD-- 64
Query: 88 NLIKIITICS-SIDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID 142
C ++ F G F+ I E M + +L+++ +Q + + + + + I
Sbjct: 65 --------CPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIA 115
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
VS H H + S++H D+KPSN+L++ + D G++ +L + +
Sbjct: 116 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--------VDDVAKD 167
Query: 203 IEIKGIVGYVAPEY---GMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEF 258
I+ G Y+APE + K SV D+++ GI ++E+ R P D+ L +
Sbjct: 168 ID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226
Query: 259 VKMALP 264
V+ P
Sbjct: 227 VEEPSP 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 143
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 196
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 194
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 38 IGQGGVSIVYKGI-LDESRSI---VAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKI 92
+G G VYKGI + E ++ VA+K++N +A+ F E + ++ H +L+++
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSFAIEYF 150
+ +C S + +V + M + L +++ + + + L +N + ++ + Y
Sbjct: 106 LGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL---LNWCVQIAKGMMYL 156
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
+VH DL N+L+ + D GLA+ L G E A+ I+
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------ 207
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++A E K + DV+++G+ + E+ T
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL---------KQKEASRSFAAECNA 80
N+ P +G+G S+V + I + AVK++++ + +E + E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 81 LRNIR-HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
LR + H N+I++ +E F +VF+ M+ L +L + T+++
Sbjct: 77 LRKVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 140 AI-DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
A+ +V A+ +IVH DLKP NILLD D+ + D G + L +PG +
Sbjct: 132 ALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLRS 182
Query: 199 ASNSIEIKGIVGYVAPE 215
+ G Y+APE
Sbjct: 183 ------VCGTPSYLAPE 193
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 89 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 139
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 192
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 85 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 133
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE-TASNSIEIKGIV 209
H + ++H DLK N+ L++D+ +GD GLA T E + G
Sbjct: 134 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGTP 181
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 89 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 139
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 140 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 192
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 223
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 224 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 111 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 161
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 162 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 214
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
+ ++S A+ Y H I++ DLK N+LLD + + D G+ K G PG
Sbjct: 112 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXF 166
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
G Y+APE G S D + G+L+ EM R P D
Sbjct: 167 C------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 96 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 146
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 199
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 85 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 133
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE-TASNSIEIKGIV 209
H + ++H DLK N+ L++D+ +GD GLA T E + G
Sbjct: 134 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGTP 181
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
IG G ++V + VA+K +NL++ + S E A+ H N++ T
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-- 75
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ--SNGQLR--FLTQRV--NIAIDVSFAIEYF 150
F D +V + + ++ ++ + G+ + L + I +V +EY
Sbjct: 76 ---SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
H + Q +H D+K NILL +D + D G++ FL T + N + K VG
Sbjct: 133 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL-----ATGGDITRNKVR-KTFVG 183
Query: 211 ---YVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRP 244
++APE + D+++FGI +E+ T P
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 97 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 147
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 148 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 200
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 88 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 138
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 139 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 191
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 194
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 48/254 (18%)
Query: 8 SNMLSMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
S+ML M Q+ P EL+K N SP G V + ++++ + V
Sbjct: 1 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRV 55
Query: 61 KVVNLKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM 114
V L + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 56 AVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 114
Query: 115 --QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQ 172
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNE 165
Query: 173 DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDV 228
D + D GLA+ E+ G V Y APE + + + D+
Sbjct: 166 DCELKILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDI 211
Query: 229 YNFGILLLEMFTRR 242
++ G ++ E+ T R
Sbjct: 212 WSVGCIMAELLTGR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 99 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 149
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 150 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 202
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 142 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 194
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 111 RASTLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDHICYFLYQ-------ILRGLKYIH- 161
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+L++ + D GLA+ T T E Y
Sbjct: 162 --SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT-----EXVATRWYR 214
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 94/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 89 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 137
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE-TASNSIEIKGIV 209
H + ++H DLK N+ L++D+ +GD GLA T E + G
Sbjct: 138 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGTP 185
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK +E +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ EY NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 194
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 109 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 157
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK-GIV 209
H + ++H DLK N+ L++D+ +GD GLA T E ++ G
Sbjct: 158 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTP 205
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 91 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 141
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT-----EYVATRWYR 194
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR-SFAAECNALRNIRHRNLIKIITIC 96
IG G ++V + VA+K +NL++ + S E A+ H N++ T
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-- 80
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ--SNGQLR--FLTQRV--NIAIDVSFAIEYF 150
F D +V + + ++ ++ + G+ + L + I +V +EY
Sbjct: 81 ---SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
H + Q +H D+K NILL +D + D G++ FL T + N + K VG
Sbjct: 138 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFL-----ATGGDITRNKVR-KTFVG 188
Query: 211 ---YVAPEYGMGSKA-SVSGDVYNFGILLLEMFTRRRP 244
++APE + D+++FGI +E+ T P
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 38 IGQGGVSIVYKGI-LDESRSI---VAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKI 92
+G G VYKGI + E ++ VA+K++N +A+ F E + ++ H +L+++
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSFAIEYF 150
+ +C S + +V + M + L +++ + + + L +N + ++ + Y
Sbjct: 83 LGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL---LNWCVQIAKGMMYL 133
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
+VH DL N+L+ + D GLA+ L G E A+ I+
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------ 184
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++A E K + DV+++G+ + E+ T
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 138
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 139 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQ--- 189
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 190 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 295
Query: 271 VDPSL 275
V PSL
Sbjct: 296 VSPSL 300
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 107 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 155
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK-GIV 209
H + ++H DLK N+ L++D+ +GD GLA T E ++ G
Sbjct: 156 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTP 203
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 110/256 (42%), Gaps = 48/256 (18%)
Query: 6 KDSNMLSMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIV 58
+ S+ML M Q+ P EL+K N SP G V + ++++ +
Sbjct: 17 RGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGL 71
Query: 59 AVKVVNLKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFE 112
V V L + A R++ E L++++H N+I ++ + + E F+ +V
Sbjct: 72 RVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 130
Query: 113 YM--QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL 170
M N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +
Sbjct: 131 LMGADLNNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAV 181
Query: 171 DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSG 226
++D + D GLA+ E+ G V Y APE + + +
Sbjct: 182 NEDCELKILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 227
Query: 227 DVYNFGILLLEMFTRR 242
D+++ G ++ E+ T R
Sbjct: 228 DIWSVGCIMAELLTGR 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 44/252 (17%)
Query: 8 SNMLSMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
S+ML M Q+ P EL+K N SP +G G V ++ VAV
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAV 58
Query: 61 KVVNLKQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM-- 114
K ++ + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 59 KKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 117
Query: 115 QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI 174
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 118 DLNNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDC 168
Query: 175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYN 230
+ D GLA+ E+ G V Y APE + + + D+++
Sbjct: 169 ELKILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 231 FGILLLEMFTRR 242
G ++ E+ T R
Sbjct: 215 VGCIMAELLTGR 226
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
+ ++S A+ Y H I++ DLK N+LLD + + D G+ K G PG
Sbjct: 116 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE--GLRPGDTTSXF 170
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
G Y+APE G S D + G+L+ EM R P D
Sbjct: 171 C------GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 38 IGQGGVSIVYKGI-LDESRSI---VAVKVVNLKQKEASRSFAAECN---ALRNIRHRNLI 90
+G G V+KG+ + E SI V +KV+ + K +SF A + A+ ++ H +++
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSFAIE 148
+++ +C + +V +Y+ +L +RQ G L + L +N + ++ +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL---LNWGVQIAKGMY 147
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
Y H +VH +L N+LL V D G+A L P + + E K
Sbjct: 148 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL----PPDDKQLLYS--EAKTP 198
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ ++A E K + DV+++G+ + E+ T
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 30 NNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVVNLK---QKEASRSFAAECNALRN 83
++F IG+G V IV K ++++ + A+K +N + ++ R+ E ++
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQK---NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-D 142
+ H L+ + F+ + +V + + +L L+Q+ + F + V + I +
Sbjct: 72 LEHPFLVNLW-----YSFQDEEDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICE 123
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+ A++Y + I+H D+KP NILLD+ H+ D +A L ET +
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-------PRETQITT 173
Query: 203 IEIKGIVGYVAPEY---GMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ G Y+APE G+ S + D ++ G+ E+ RRP
Sbjct: 174 --MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 115 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 225
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 226 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + ++ +++ + A K+V L + + E + R++ H++++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYF 150
FE DF +V E + R+L + ++ + + R+ +++ + +Y
Sbjct: 83 F-----FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC------QYL 131
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK-GIV 209
H + ++H DLK N+ L++D+ +GD GLA T E ++ G
Sbjct: 132 HRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGTP 179
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S DV++ G ++ + + P
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNA 80
A ++ T+++ ++G+G S+V + + A K++N K+ A + E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVN 138
R ++H N++++ SI EGF + +VF+ + + G+L + +
Sbjct: 84 CRLLKHPNIVRLH---DSISEEGFHY--LVFDLV-----------TGGELFEDIVAREYY 127
Query: 139 IAIDVSFAI----EYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYE 191
D S I E +H Q IVH DLKP N+LL + + D GLA + G +
Sbjct: 128 SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 188 QAWFG--------FAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 98 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 208
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 209 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 143
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 144 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 196
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 105 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 160 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 215
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 216 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 40/221 (18%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVN----LKQKEASRSFAAECNALRNIRHRNLIKI 92
K G G V V K + I A+KV+ ++ + + AE N L ++H ++ +
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID---------V 143
I F+ ++ EY+ S G+L +R I ++ +
Sbjct: 87 IYA-----FQTGGKLYLILEYL-----------SGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
S A+ + H Q I++ DLKP NI+L+ + D GL K GT T +I
Sbjct: 131 SMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTI 185
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E Y+APE M S + + D ++ G L+ +M T P
Sbjct: 186 E------YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 209
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 210 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 38 IGQGGVSIVYKGI-LDESRSI---VAVKVVNLKQKEASRSFAAECN---ALRNIRHRNLI 90
+G G V+KG+ + E SI V +KV+ + K +SF A + A+ ++ H +++
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSFAIE 148
+++ +C + +V +Y+ +L +RQ G L + L +N + ++ +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL---LNWGVQIAKGMY 129
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
Y H +VH +L N+LL V D G+A L P + + E K
Sbjct: 130 YLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL----PPDDKQLLYS--EAKTP 180
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ ++A E K + DV+++G+ + E+ T
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLR---QSNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKCQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 98 ----CIGVSLQSLP-RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 208
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 209 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 90 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 145 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 200
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 201 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAV-KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+ K+ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 125 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 235
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 236 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 223
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 224 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV + S +VAVK ++L++++ E +R+ +H N++++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN-- 215
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
+ D +V E+++ L + + Q + + V A+ H
Sbjct: 216 ---SYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQ--- 266
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
++H D+K +ILL D G + L+ F G A+ + K +VG ++A
Sbjct: 267 GVIHRDIKSDSILLTHD-----GRVKLSDF------GFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNE-GLTLHEFVKMALPDKVMEI-- 270
PE D+++ GI+++EM P FNE L + ++ LP ++ +
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPP---YFNEPPLKAMKMIRDNLPPRLKNLHK 372
Query: 271 VDPSL 275
V PSL
Sbjct: 373 VSPSL 377
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 25/211 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIGQG VY + + VA++ +NL+Q+ E +R ++ N++ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 84
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ D +V EY+ +L + ++ GQ+ + + A+E+ H +
Sbjct: 85 ---SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI------AAVCRECLQALEFLHSN 135
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
++H D+K NILL D + D FG+ E + S + G ++A
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTD-------FGFCAQITPEQSKRSTMV-GTPYWMA 184
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE D+++ GI+ +EM P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIG+G IV S VAVK+++L++++ E +R+ +H N++++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK-- 109
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
S + E ++ E++Q L + Q+R +++ + A+ Y H
Sbjct: 110 SYLVGEEL---WVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQ-- 160
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YV 212
++H D+K +ILL D G + L+ F G A+ + + + K +VG ++
Sbjct: 161 -GVIHRDIKSDSILLTLD-----GRVKLSDF------GFCAQISKDVPKRKXLVGTPYWM 208
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
APE S + D+++ GI+++EM P
Sbjct: 209 APEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLP- 209
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 210 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 56 SIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYM 114
+ VAVK++ + R +E N L+ + H ++IK+ CS +G ++ EY
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYA 108
Query: 115 QNRNLEQWLRQSN----GQLRFLTQRVNIAID------------VSFAIEY---FHHHCQ 155
+ +L +LR+S G L R + ++D +SFA + + +
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+VH DL NIL+ + + D GL++ + YE + + + I +K ++A E
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDV--YEEDSXVKRSQGRIPVK----WMAIE 222
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR------PTDAMFNEGLTLHEFVKMALPDKVME 269
+ DV++FG+LL E+ T P + +FN T H +M PD E
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH---RMERPDNCSE 279
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 114/274 (41%), Gaps = 56/274 (20%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ +IG+G V+KGI + ++ +VA+K+++L++ E + I
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-----------DIQQEIT 73
Query: 92 IITICSS---IDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K I+ EY+ + LR G Q + ++
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA--GPFDEF-QIATMLKEIL 130
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + GD+ LA F G A + I+
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQ-----GDVKLADF------GVAGQLTDTQIK 176
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM 261
VG ++APE S D+++ GI +E+ P M
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH------------ 224
Query: 262 ALPDKVMEIV----DPSLLLEVTANNYSWIEDCL 291
P +V+ ++ P+L+ + T + +I+ CL
Sbjct: 225 --PMRVLFLIPKNNPPTLVGDFTKSFKEFIDACL 256
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 44/252 (17%)
Query: 8 SNMLSMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
S+ML M Q+ P EL+K N SP +G G V ++ VAV
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAV 58
Query: 61 KVVNLKQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM-- 114
K ++ + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 59 KKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 117
Query: 115 QNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI 174
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 118 DLNNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDS 168
Query: 175 VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYN 230
+ D GLA+ E+ G V Y APE + + + D+++
Sbjct: 169 ELKILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWS 214
Query: 231 FGILLLEMFTRR 242
G ++ E+ T R
Sbjct: 215 VGCIMAELLTGR 226
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 34/220 (15%)
Query: 38 IGQGGVSIVYKGIL-----DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIK 91
+G G VY+G + D S VAVK + + ++ F E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 92 IITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFA 146
C + + + I+ E M +L+ +LR++ + + +++A D++
Sbjct: 113 ----CIGVSLQSLP-RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFG---YEPGTAAETAS 200
+Y + +H D+ N LL VA +GD G+A+ ++ Y G A
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP- 223
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
V ++ PE M + D ++FG+LL E+F+
Sbjct: 224 --------VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIGQG VY + + VA++ +NL+Q+ E +R ++ N++ +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ D +V EY+ +L + ++ GQ+ + + + A+E+ H +
Sbjct: 86 ---SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN 136
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
++H D+K NILL D + D FG+ E + S + G ++A
Sbjct: 137 ---QVIHRDIKSDNILLGMDGSVKLTD-------FGFCAQITPEQSKRSXMV-GTPYWMA 185
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE D+++ GI+ +EM P
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIGQG VY + + VA++ +NL+Q+ E +R ++ N++ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 84
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ D +V EY+ +L + ++ GQ+ + + + A+E+ H +
Sbjct: 85 ---SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN 135
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
++H D+K NILL D + D FG+ E + S + G ++A
Sbjct: 136 ---QVIHRDIKSDNILLGMDGSVKLTD-------FGFCAQITPEQSKRSXMV-GTPYWMA 184
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE D+++ GI+ +EM P
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 33/213 (15%)
Query: 38 IGQGGVSIVYKGILDES---RSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIIT 94
I GG+ +Y LD + R +V +V+ EA AE L + H ++++I
Sbjct: 88 IAHGGLGWIYLA-LDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
D G IV EY+ Q L++S GQ + + + +++ A+ Y H
Sbjct: 147 FVEHTDRHGDPVGYIVMEYVGG----QSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI- 201
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL--FGYEPGTAAETASNSIEIKGIVGYV 212
+V+ DLKP NI+L ++ + + DLG + FGY + G G+
Sbjct: 202 --GLVYNDLKPENIMLTEEQLKLI-DLGAVSRINSFGY--------------LYGTPGFQ 244
Query: 213 APEYGMGSKASVSGDVYNFG----ILLLEMFTR 241
APE + + +V+ D+Y G L L++ TR
Sbjct: 245 APEI-VRTGPTVATDIYTVGRTLAALTLDLPTR 276
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 20/211 (9%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+ + ++KG + +V V V SR F EC LR H N++ ++ C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
S ++ + +L L + + +Q V A+D + + H +P
Sbjct: 77 QS---PPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL-HTLEP 132
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
I L ++ +D+D A + + KF F PG A +VAPE
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADV-KFSF-QSPGRXYAPA-----------WVAPEA 179
Query: 217 GMGSKASV---SGDVYNFGILLLEMFTRRRP 244
S D ++F +LL E+ TR P
Sbjct: 180 LQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 102
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 160
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 161 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 210
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 95
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 153
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 154 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 203
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 84
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 142
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 143 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 192
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 91
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 149
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 150 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 199
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
Y+ H Q +IVH DLKP NILL + +GD+ + F + G A E EI G
Sbjct: 145 YYLH--QNNIVHLDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELR----EIMGT 196
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE + + D++N GI+ + T P
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 95
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 153
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 154 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 203
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 87
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 145
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 146 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 195
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G GG +V+ + ++ VA+K + L ++ + E +R + H N++K+ I
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 98 SIDFEGFDFKA---------IVFEYMQN---RNLEQW-LRQSNGQLRFLTQRVNIAIDVS 144
+ D IV EYM+ LEQ L + + +L F+ Q +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLR------ 131
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLD-QDIVAHVGDLGLAKFL 187
++Y H +++H DLKP+N+ ++ +D+V +GD GLA+ +
Sbjct: 132 -GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 56 SIVAVKVVNLKQKEAS-RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYM 114
+ VAVK++ + R +E N L+ + H ++IK+ CS +G ++ EY
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYA 108
Query: 115 QNRNLEQWLRQSN----GQLRFLTQRVNIAID------------VSFAIEY---FHHHCQ 155
+ +L +LR+S G L R + ++D +SFA + + +
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
+VH DL NIL+ + + D GL++ + YE + + + I +K ++A E
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDV--YEEDSYVKRSQGRIPVK----WMAIE 222
Query: 216 YGMGSKASVSGDVYNFGILLLEMFTRRR------PTDAMFNEGLTLHEFVKMALPDKVME 269
+ DV++FG+LL E+ T P + +FN T H +M PD E
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH---RMERPDNCSE 279
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 95 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 145
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ + E Y
Sbjct: 146 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----DPDHDHTGFLXEXVATRWYR 198
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 96 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 146
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ + E Y
Sbjct: 147 --SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-----DPDHDHTGFLXEXVATRWYR 199
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E IV + M+ +L + L+ SN + FL Q + ++Y H
Sbjct: 93 RAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 143
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 144 --SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 196
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
I+ E M+ L +++ Q + I D+ AI++ H H +I H D+KP N+
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENL 140
Query: 169 LL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG-YVAPEYGMGSKASV 224
L ++D V + D G AK ET N+++ YVAPE K
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK-----------ETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 225 SGDVYNFGILL 235
S D+++ G+++
Sbjct: 190 SCDMWSLGVIM 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 117
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 175
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 176 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 225
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 18/131 (13%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI 168
I+ E M+ L +++ Q + I D+ AI++ H H +I H D+KP N+
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENL 159
Query: 169 LL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG-YVAPEYGMGSKASV 224
L ++D V + D G AK ET N+++ YVAPE K
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK-----------ETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 225 SGDVYNFGILL 235
S D+++ G+++
Sbjct: 209 SCDMWSLGVIM 219
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 24/212 (11%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN----LKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V AVKV+ LK+KE + L+N++H L+ +
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL- 104
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHH 152
F+ D V +Y+ L L++ FL R A +++ A+ Y H
Sbjct: 105 ----HFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLH- 156
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+IV+ DLKP NILLD + D GL K E S + G Y+
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--------ENIEHNSTTSTFCGTPEYL 206
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
APE + D + G +L EM P
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 101/250 (40%), Gaps = 34/250 (13%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN 88
++ F +++G+G SIVY+ ++ A+KV LK+ + E L + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKV--LKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR--VNIAIDVSFA 146
+IK+ I FE ++V E + L + + + ++R + + A
Sbjct: 110 IIKLKEI-----FETPTEISLVLELVTGGELFDRIVEKG----YYSERDAADAVKQILEA 160
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQ---DIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ Y H + IVH DLKP N+L D + D GL+K + E +T
Sbjct: 161 VAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKT----- 209
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILL------LEMFTRRRPTDAMFNEGLTLHE 257
+ G GY APE G D+++ GI+ E F R MF L
Sbjct: 210 -VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY 268
Query: 258 FVKMALPDKV 267
+ D+V
Sbjct: 269 YFISPWWDEV 278
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTALAYLESK 130
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIK----WMA 180
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 34/242 (14%)
Query: 23 AELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALR 82
E K N++ + QG + + + ++ A+K E R F N
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 83 NIRHR-----NLIKIIT--------ICSSIDFEGFDFKAIVFEYMQNRNL----EQWLRQ 125
+I+ + N ++IIT C I +D I++EYM+N ++ E +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 126 SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
F+ +V I S + + H + +I H D+KPSNIL+D++ + D G ++
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200
Query: 186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSG---DVYNFGILLLEMFTRR 242
++ + + +G ++ PE+ +++S +G D+++ GI L MF
Sbjct: 201 YMVDKKIKGS----------RGTYEFMPPEF-FSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 243 RP 244
P
Sbjct: 250 VP 251
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 96
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 154
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 155 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 204
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 47/223 (21%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+GG + Y+ +++ + A KVV + L+ + + I I
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV------------PKSMLLKPHQKEKMSTEIAIHK 97
Query: 98 SID------FEGF----DFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAID 142
S+D F GF DF +V E + R+L + ++ F+ Q +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---- 153
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASN 201
++Y H++ ++H DLK N+ L+ D+ +GD GLA K F E
Sbjct: 154 ---GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---------R 198
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
++ G Y+APE S D+++ G +L + + P
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 77 ECNALRNIRHRNLIKIITIC-SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG----QLR 131
E L++ +H N+I I I ++ + F +V + M++ +L Q + S +R
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVR 162
Query: 132 -FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGY 190
FL Q + ++Y H ++H DLKPSN+L++++ +GD G+A+ L
Sbjct: 163 YFLYQLLR-------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-- 210
Query: 191 EPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRR 243
+ AE E Y APE + + + + D+++ G + EM RR+
Sbjct: 211 --TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 77 ECNALRNIRHRNLIKIITIC-SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG----QLR 131
E L++ +H N+I I I ++ + F +V + M++ +L Q + S +R
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVR 161
Query: 132 -FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGY 190
FL Q + ++Y H ++H DLKPSN+L++++ +GD G+A+ L
Sbjct: 162 YFLYQLLR-------GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-- 209
Query: 191 EPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRR 243
+ AE E Y APE + + + + D+++ G + EM RR+
Sbjct: 210 --TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 111
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 169
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 170 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 219
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 220 ELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 51 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 107
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL--------RFLT--QRVNIAIDVSFAIEYFHHHCQP 156
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 108 MVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASR 163
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDI--YKDPDYVRKGDARLPLK----WMAPET 217
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 218 IFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 88
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 146
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 147 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 196
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 117
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 175
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 176 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 225
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 226 ELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+GG + Y+ +++ + A KVV L + + E +++ + +++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAIDVSFAIEY 149
FE DF +V E + R+L + ++ F+ Q + ++Y
Sbjct: 94 F-----FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ-------GVQY 141
Query: 150 FHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGI 208
H++ ++H DLK N+ L+ D+ +GD GLA K F E ++ G
Sbjct: 142 LHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---------RKKDLCGT 189
Query: 209 VGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE S D+++ G +L + + P
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 119
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 177
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 178 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 227
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 228 ELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ KIG+G V+KGI + ++ +VA+K+++L++ E + I
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 72
Query: 92 IITICSS---IDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K I+ EY+ + L G L TQ I ++
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLD-ETQIATILREIL 129
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + G++ LA F G A + I+
Sbjct: 130 KGLDYLHSEKK---IHRDIKAANVLLSEH-----GEVKLADF------GVAGQLTDTQIK 175
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
VG ++APE S D+++ GI +E+ P
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ Y NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK+++ Q + + E ++ + H N++K+ + I+ E + +V EY
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV---IETEKTLY--LVMEYAS 97
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 98 GGEVFDYL-VAHGRMKEKEARAKFRQIVS-AVQYCH---QKYIVHRDLKAENLLLDGDMN 152
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F G + T G Y APE G K DV++ G+
Sbjct: 153 IKIADFGFSNEFTVGNKLDTFC----------GSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 203 ILYTLVSGSLPFDG 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ KIG+G V+KGI + ++ +VA+K+++L++ E + I
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 77
Query: 92 IITICSS---IDFEGFDFKA----IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K I+ EY+ + L G L TQ I ++
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLD-ETQIATILREIL 134
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + G++ LA F G A + I+
Sbjct: 135 KGLDYLHSEKK---IHRDIKAANVLLSEH-----GEVKLADF------GVAGQLTDTQIK 180
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
VG ++APE S D+++ GI +E+ P
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ KIG+G V+KGI + ++ +VA+K+++L++ E + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 92 IITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K I+ EY+ + L G L TQ I ++
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLD-ETQIATILREIL 114
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + G++ LA F G A + I+
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEH-----GEVKLADF------GVAGQLTDTQIK 160
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
VG ++APE S D+++ GI +E+ P
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 38/223 (17%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIK 91
F+ KIG+G V+KGI + ++ +VA+K+++L++ E + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 92 IITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVS 144
+++ C S + G K I+ EY+ + L G L TQ I ++
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP--GPLD-ETQIATILREIL 114
Query: 145 FAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
++Y H + +H D+K +N+LL + G++ LA F G A + I+
Sbjct: 115 KGLDYLHSEKK---IHRDIKAANVLLSEH-----GEVKLADF------GVAGQLTDTQIK 160
Query: 205 IKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
VG ++APE S D+++ GI +E+ P
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 162
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 220
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 221 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 270
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 271 ELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 16/226 (7%)
Query: 36 NKIGQGGVSIV--YKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKII 93
K+G+GG S V +G+ D A+K + +++ E + R H N+++++
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGH--FYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 94 TICSSIDFEGFDFKA-IVFEYMQNRNLEQWLRQSNGQLRFLT--QRVNIAIDVSFAIEYF 150
C + G +A ++ + + L + + + FLT Q + + + + +E
Sbjct: 93 AYC--LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLG-LAKFLFGYEPGTAAETASNSIEIKGIV 209
H H DLKP+NILL + + DLG + + E A T + + +
Sbjct: 151 H---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 210 GYVAPE-YGMGSKASVS--GDVYNFGILLLEMFTRRRPTDAMFNEG 252
Y APE + + S + DV++ G +L M P D +F +G
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V ++ +R E +R + H N++++
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFY 121
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 179
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 180 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 229
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 230 ELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 27/143 (18%)
Query: 108 AIVFEYMQNRNLEQWLRQS--NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKP 165
A+VFE++ N + +Q LRQ+ + +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQ-LRQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKP 159
Query: 166 SNILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSK 221
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 160 HNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL--- 213
Query: 222 ASVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 -----DMWSLGCMLASMIFRKEP 231
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 130
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 180
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 34/239 (14%)
Query: 14 KQQFPMISYAELSKATNN-FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR 72
++Q + L+K F K+G+G VYK I E+ IVA+K V
Sbjct: 12 RRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV--------- 62
Query: 73 SFAAECNALRNIRHRNLIKIITICSS---IDFEGFDFK----AIVFEYMQNRNLEQWLRQ 125
E + I+ I I+ C S + + G FK IV EY ++ +R
Sbjct: 63 --PVESDLQEIIKE---ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117
Query: 126 SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
N L + I +EY H + +H D+K NILL+ + A + D G+A
Sbjct: 118 RNKTLT-EDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA- 172
Query: 186 FLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G + + + G ++APE + D+++ GI +EM + P
Sbjct: 173 -------GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 26/196 (13%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK+++ Q +S + E + + H N++K+ + I+ E + +V EY
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV---IETEKTLY--LVXEYAS 96
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+ + R VS A++Y H Q IVH DLK N+LLD D
Sbjct: 97 GGEVFDYL-VAHGRXKEKEARAKFRQIVS-AVQYCH---QKFIVHRDLKAENLLLDADXN 151
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIE-IKGIVGYVAPEYGMGSKAS-VSGDVYNFG 232
+ D G + +F FG N ++ G Y APE G K DV++ G
Sbjct: 152 IKIADFGFSNEFTFG-----------NKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLG 200
Query: 233 ILLLEMFTRRRPTDAM 248
++L + + P D
Sbjct: 201 VILYTLVSGSLPFDGQ 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 34/208 (16%)
Query: 52 DESRSIVAVKVVNLKQKEASRSFA---AECNALRNI-RHRNLIKIITICSSIDFEGFDFK 107
D+ + V V V LK + + +E ++ I +H+N+I ++ C+ +G +
Sbjct: 62 DKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY- 117
Query: 108 AIVFEYMQNRNLEQWLRQ---------------SNGQLRFLTQRVNIAIDVSFAIEYFHH 152
++ Y NL ++LR Q+ F V+ ++ +EY
Sbjct: 118 -VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF-KDLVSCTYQLARGMEYLAS 175
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL N+L+ ++ V + D GLA+ + + +T + + +K ++
Sbjct: 176 Q---KCIHRDLAARNVLVTENNVMKIADFGLARDINNID--YYKKTTNGRLPVK----WM 226
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE + DV++FG+L+ E+FT
Sbjct: 227 APEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVN----LKQKEASRSFAAECNALRNIRHRNLIKI 92
K G G V V K + I A+KV+ ++ + + AE N L ++H ++ +
Sbjct: 27 KGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL 86
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAID---------V 143
I F+ ++ EY+ S G+L +R I ++ +
Sbjct: 87 IYA-----FQTGGKLYLILEYL-----------SGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
S A+ + H Q I++ DLKP NI+L+ + D GL K GT +I
Sbjct: 131 SMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTI 185
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E Y+APE M S + + D ++ G L+ +M T P
Sbjct: 186 E------YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
KIGQG VY + + VA++ +NL+Q+ E +R ++ N++ +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 85
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQS---NGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ D +V EY+ +L + ++ GQ+ + + + A+E+ H +
Sbjct: 86 ---SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN 136
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
++H ++K NILL D + D FG+ E + S + G ++A
Sbjct: 137 ---QVIHRNIKSDNILLGMDGSVKLTD-------FGFCAQITPEQSKRSTMV-GTPYWMA 185
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE D+++ GI+ +EM P
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 47/223 (21%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+GG + Y+ +++ + A KVV + L+ + + I I
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV------------PKSMLLKPHQKEKMSTEIAIHK 97
Query: 98 SID------FEGF----DFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAID 142
S+D F GF DF +V E + R+L + ++ F+ Q +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---- 153
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASN 201
++Y H++ ++H DLK N+ L+ D+ +GD GLA K F G +T
Sbjct: 154 ---GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKT--- 201
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ G Y+APE S D+++ G +L + + P
Sbjct: 202 ---LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 51 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 107
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL--------RFLT--QRVNIAIDVSFAIEYFHHHCQP 156
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 108 MVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASR 163
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 164 KXIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPET 217
Query: 217 GMGSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 218 IFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 47/223 (21%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G+GG + Y+ +++ + A KVV + L+ + + I I
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVV------------PKSMLLKPHQKEKMSTEIAIHK 97
Query: 98 SID------FEGF----DFKAIVFEYMQNRNLEQWLRQSNGQLR-----FLTQRVNIAID 142
S+D F GF DF +V E + R+L + ++ F+ Q +
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ---- 153
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLA-KFLFGYEPGTAAETASN 201
++Y H++ ++H DLK N+ L+ D+ +GD GLA K F E
Sbjct: 154 ---GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---------R 198
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ G Y+APE S D+++ G +L + + P
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 75 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 127
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 177
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 178 PESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 106 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 158
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 159 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 208
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 209 PESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN-LKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
IG+G +V + ++ VA+K ++ + + + E L RH N+I I I
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQ---SNGQL-RFLTQRVNIAIDVSFAIEYFHH 152
+ E +V ++ +L + L+ SN + FL Q + ++Y H
Sbjct: 111 RAPTIEQMKDVYLV-THLMGADLYKLLKTQHLSNDHICYFLYQ-------ILRGLKYIH- 161
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+++H DLKPSN+LL+ + D GLA+ T T E Y
Sbjct: 162 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT-----EYVATRWYR 214
Query: 213 APEYGMGSKA-SVSGDVYNFGILLLEMFTRR 242
APE + SK + S D+++ G +L EM + R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 130
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 180
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 83 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 135
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 136 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 185
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 186 PESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 80 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 132
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 133 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 182
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 183 PESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VA+K+++ Q + + E ++ + H N++K+ + I+ E + ++ EY
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV---IETEKTLY--LIMEYAS 94
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 95 GGEVFDYL-VAHGRMKEKEARSKFRQIVS-AVQYCH---QKRIVHRDLKAENLLLDADMN 149
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGDVYNFGI 233
+ D G + +F G + T G Y APE G K DV++ G+
Sbjct: 150 IKIADFGFSNEFTVGGKLDTFC----------GSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 200 ILYTLVSGSLPFDG 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 51 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 107
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 108 MVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 167 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDXVRKGDARLPLK----WM 217
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 13 MKQQFPMISYAELS----KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK 68
M QF + A+ + K P QG V + +L + ++ + Q
Sbjct: 4 MDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT 63
Query: 69 EASRSFAAECNALRNIRHRNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSN 127
A R++ E L+ + H+N+I ++ + + E F +V E M + NL Q +
Sbjct: 64 HAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMEL 121
Query: 128 GQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFL 187
R + + I++ H I+H DLKPSNI++ D + D GLA+
Sbjct: 122 DHERM----SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-- 172
Query: 188 FGYEPGTAAETASNSIEIKGIV---GYVAPE--YGMGSKASVSGDVYNFGILLLEM 238
TAS + + V Y APE GMG K +V D+++ G ++ E+
Sbjct: 173 ----------TASTNFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEL 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 81 GVITE------NPVWIIMELCTLGELRSFLQVRKYSLD-LASLILYAYQLSTALAYLESK 133
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 134 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 183
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 184 PESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V + +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V + +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKI-ITIC 96
IG G +VY+ L +S +VA+K V + +R E +R + H N++++
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFY 83
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF-AIEYFHHHCQ 155
SS + + + +V +Y+ S + V + + F ++ Y H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-- 141
Query: 156 PSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I H D+KP N+LLD D V + D G AK L EP + + Y AP
Sbjct: 142 -GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY---------YRAP 191
Query: 215 EYGMGSKASVSG-DVYNFGILLLEMF 239
E G+ S DV++ G +L E+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 23 AELSK---ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAA 76
AE+ K ++F +G+G VY +++ I+A+KV+ L+++
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR 136
E ++RH N++++ F ++ E+ L + L Q +G RF QR
Sbjct: 64 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL-QKHG--RFDEQR 115
Query: 137 -VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
+++ A+ Y H + ++H D+KP N+L+ + G+L +A F G +
Sbjct: 116 SATFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF------GWS 161
Query: 196 AETAS-NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
S + G + Y+ PE G D++ G+L E P D+
Sbjct: 162 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTALAYLESK 130
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ +GD GL++++ E T + + + IK ++A
Sbjct: 131 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 180
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTALAYLESK 510
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ + +GD GL++++ E T + + + IK ++A
Sbjct: 511 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 560
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 23 AELSK---ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAA 76
AE+ K ++F +G+G VY +++ I+A+KV+ L+++
Sbjct: 5 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR 136
E ++RH N++++ F ++ E+ L + L Q +G RF QR
Sbjct: 65 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL-QKHG--RFDEQR 116
Query: 137 -VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
+++ A+ Y H + ++H D+KP N+L+ + G+L +A F G +
Sbjct: 117 SATFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF------GWS 162
Query: 196 AETAS-NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
S + G + Y+ PE G D++ G+L E P D+
Sbjct: 163 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQN---RNLEQWLRQSNGQLRFL 133
E L+ + H N++K++ + +D D +VFE + + S Q RF
Sbjct: 86 EIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFY 142
Query: 134 TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
Q D+ IEY H+ I+H D+KPSN+L+ +D + D G++ G
Sbjct: 143 FQ------DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG---- 189
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSG---DVYNFGILL 235
+ SN++ G ++APE ++ SG DV+ G+ L
Sbjct: 190 -SDALLSNTV---GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 51 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 107
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 108 MVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 167 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WM 217
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 30/220 (13%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
+++ K+G+G S V++ I + VAVK++ +K+ + LR
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGG----- 91
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIE 148
IIT+ + A+VFE++ N + +Q + ++ +RF + A+D ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM- 150
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
I+H D+KP N+L+D + + D GLA+F Y PG S KG
Sbjct: 151 --------GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKG 199
Query: 208 ---IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+V Y +Y + D+++ G +L M R+ P
Sbjct: 200 PELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP 231
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 23 AELSK---ATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAA 76
AE+ K ++F +G+G VY +++ I+A+KV+ L+++
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR 136
E ++RH N++++ F ++ E+ L + L Q +G RF QR
Sbjct: 64 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL-QKHG--RFDEQR 115
Query: 137 -VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
+++ A+ Y H + ++H D+KP N+L+ + G+L +A F G +
Sbjct: 116 SATFMEELADALHYCH---ERKVIHRDIKPENLLM-----GYKGELKIADF------GWS 161
Query: 196 AETAS-NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
S + G + Y+ PE G D++ G+L E P D+
Sbjct: 162 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 88 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 144
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 145 MVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 204 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WM 254
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 255 APETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V K + VA+K+V +K R A E L ++R ++ + +
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 98 SIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ E F F+ + FE + + NL + ++++ Q L A + ++ H +
Sbjct: 164 ML--ENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN- 219
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I+H DLKP NILL Q G G+ FG + E I+ Y AP
Sbjct: 220 --RIIHCDLKPENILLKQQ-----GRSGIKVIDFG---SSCYEHQRVYTXIQSRF-YRAP 268
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +G++ + D+++ G +L E+ T
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 53 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 109
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 110 MVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 169 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WM 219
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 220 APETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V K + VA+K+V +K R A E L ++R ++ + +
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 98 SIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ E F F+ + FE + + NL + ++++ Q L A + ++ H +
Sbjct: 164 ML--ENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN- 219
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I+H DLKP NILL Q G G+ FG + E I+ Y AP
Sbjct: 220 --RIIHCDLKPENILLKQQ-----GRSGIKVIDFG---SSCYEHQRVYTXIQSRF-YRAP 268
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +G++ + D+++ G +L E+ T
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLT 294
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 37/226 (16%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRN 88
T+ + IG G S+ + I + AVK+++ +++ + LR +H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQHPN 77
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNL-EQWLRQSNGQLRFLTQRVNIAI--DVSF 145
+I + + ++ + +V E + L ++ LRQ +F ++R A+ ++
Sbjct: 78 IITLKDV-----YDDGKYVYVVTELXKGGELLDKILRQ-----KFFSEREASAVLFTITK 127
Query: 146 AIEYFHHHCQPSIVHGDLKPSNIL-LDQD---IVAHVGDLGLAKFLFGYEPG---TAAET 198
+EY H +VH DLKPSNIL +D+ + D G AK L E G T T
Sbjct: 128 TVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA-ENGLLXTPCYT 183
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A+ +VAPE + D+++ G+LL T P
Sbjct: 184 AN----------FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV--NLKQKEASRSFAAECNALRNIRHR 87
++ P ++G+G +V K S I AVK + + +E R + R +
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTV--- 90
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRV--NIAIDVSF 145
+ +T ++ EG + + + +L+++ +Q + + + + + IA+ +
Sbjct: 91 DCPFTVTFYGALFREG---DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
A+E H H + S++H D+KPSN+L++ D G++ +L + + I+
Sbjct: 148 ALE--HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL--------VDDVAKDID- 196
Query: 206 KGIVGYVAPEY---GMGSKA-SVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVKM 261
G Y APE + K SV D+++ GI +E+ R P D+ L + V+
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEE 256
Query: 262 ALP 264
P
Sbjct: 257 PSP 259
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
SM Q+ P EL+K N SP G V + ++++ + V V
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKK 66
Query: 65 LKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QN 116
L + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 67 LSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 176
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFG 232
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 177 KILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 233 ILLLEMFTRR 242
++ E+ T R
Sbjct: 223 CIMAELLTGR 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 35/258 (13%)
Query: 5 HKDSNMLSMKQQFPMISY--AELSKATNNFSPANKIGQGGVSIVYKGI---LDESRSIVA 59
H D + L + + + Y ++ + + +G+G V + +D++ +
Sbjct: 1 HMDPDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRT 60
Query: 60 VKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
V V LK+ R+ +E L +I H N++ ++ C+ G IV E+ +
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCK 116
Query: 116 NRNLEQWLRQSNGQL-----------RFLT--QRVNIAIDVSFAIEYFHHHCQPSIVHGD 162
NL +LR + FLT + + V+ +E+ +H D
Sbjct: 117 FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173
Query: 163 LKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKA 222
L NILL + V + D GLA+ + + + +K ++APE
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDI--XKDPDXVRKGDARLPLK----WMAPETIFDRVY 227
Query: 223 SVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 228 TIQSDVWSFGVLLWEIFS 245
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 36 NKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNL 89
++G+ VYKG L E VA+K + K + R F E ++H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWL---------------RQSNGQLRFLT 134
+ ++ + + +++F Y + +L ++L R L
Sbjct: 92 VCLLGVVTKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE-PP 145
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
V++ ++ +EY H +VH DL N+L+ + + DLGL + ++
Sbjct: 146 DFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA---AD 199
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ NS+ + ++APE M K S+ D++++G++L E+F+
Sbjct: 200 YYKLLGNSLLP---IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
SM Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLS 58
Query: 65 LKQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRN 118
+ A R++ E L++++H N+I ++ + + E F+ +V M N
Sbjct: 59 RPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 119 LEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV 178
+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 118 IVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGIL 234
D GLA+ E+ G V Y APE + + + D+++ G +
Sbjct: 169 LDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 235 LLEMFTRR 242
+ E+ T R
Sbjct: 215 MAELLTGR 222
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA--SRSFAAECNALRNI 84
K +N+ + IG+G VY + VA+K VN ++ + E L +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLT-QRVNIAIDV 143
+ +I++ + D FD IV E + + +L++ + FLT Q V +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTP----IFLTEQHVKTILYN 139
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
E F H + I+H DLKP+N LL+QD + D GLA+
Sbjct: 140 LLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EYM ++
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYMPGGDMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 KVADFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 36 NKIGQGGVSIVYKGIL-----DESRSIVAVKVVNLKQKEASRS-FAAECNALRNIRHRNL 89
++G+ VYKG L E VA+K + K + R F E ++H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWL---------------RQSNGQLRFLT 134
+ ++ + + +++F Y + +L ++L R L
Sbjct: 75 VCLLGVVTKDQP-----LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE-PP 128
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
V++ ++ +EY H +VH DL N+L+ + + DLGL + ++
Sbjct: 129 DFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA---AD 182
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ NS+ + ++APE M K S+ D++++G++L E+F+
Sbjct: 183 YYKLLGNSLLP---IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
SM Q+ P EL+K N SP G V + ++++ + V V
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKK 66
Query: 65 LKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QN 116
L + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 67 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 176
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFG 232
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 177 KILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 233 ILLLEMFTRR 242
++ E+ T R
Sbjct: 223 CIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 48/250 (19%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
SM Q+ P EL+K N SP G V + ++++ + V V
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKK 66
Query: 65 LKQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QN 116
L + A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 67 LSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 125
Query: 117 RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 126 NNIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 176
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFG 232
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 177 KILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 222
Query: 233 ILLLEMFTRR 242
++ E+ T R
Sbjct: 223 CIMAELLTGR 232
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EYM ++
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYMPGGDMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 KVADFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 29/144 (20%)
Query: 108 AIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS-IVHGDLK 164
A+VFEY+ N + +Q L Q ++ +RF + A+D +C I+H D+K
Sbjct: 111 ALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLKALD----------YCHSKGIMHRDVK 159
Query: 165 PSNILLD-QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGS 220
P N+++D Q + D GLA+F Y P S KG +V Y +Y +
Sbjct: 160 PHNVMIDHQQKKLRLIDWGLAEF---YHPAQEYNVRVASRYFKGPELLVDYQMYDYSL-- 214
Query: 221 KASVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M RR P
Sbjct: 215 ------DMWSLGCMLASMIFRREP 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 58 VAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VA+K+++ Q + + E ++ + H N++K+ + I+ E + ++ EY
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV---IETEKTLY--LIMEYAS 97
Query: 116 NRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
+ +L ++G+++ R VS A++Y H Q IVH DLK N+LLD D+
Sbjct: 98 GGEVFDYL-VAHGRMKEKEARSKFRQIVS-AVQYCH---QKRIVHRDLKAENLLLDADMN 152
Query: 176 AHVGDLGLA-KFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKAS-VSGDVYNFGI 233
+ D G + +F G + G Y APE G K DV++ G+
Sbjct: 153 IKIADFGFSNEFTVGGKLDAFC----------GAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 234 LLLEMFTRRRPTDA 247
+L + + P D
Sbjct: 203 ILYTLVSGSLPFDG 216
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG+G V K + VA+K+V +K R A E L ++R ++ + +
Sbjct: 105 IGKGXFGQVVKAYDHKVHQHVALKMVR-NEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 98 SIDFEGFDFK---AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
+ E F F+ + FE + + NL + ++++ Q L A + ++ H +
Sbjct: 164 ML--ENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN- 219
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
I+H DLKP NILL Q G G+ FG + E I+ Y AP
Sbjct: 220 --RIIHCDLKPENILLKQQ-----GRSGIKVIDFG---SSCYEHQRVYXXIQSRF-YRAP 268
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +G++ + D+++ G +L E+ T
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLT 294
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 38 IGQGGVSIVYKGILDESRSI---VAVKVV----NLKQKEASRSFAAECNALRNIRHRNLI 90
+G+G VY+G+ + VAVK L KE F +E ++N+ H +++
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIV 72
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
K+I I + I+ E L +L ++ L+ LT V ++ + A+ Y
Sbjct: 73 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYL 125
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
+ VH D+ NIL+ +GD GL++++ E + + + IK
Sbjct: 126 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPIK---- 175
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++PE + + + DV+ F + + E+ +
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 38 IGQGGVSIVYKGILDESRSI---VAVKVV----NLKQKEASRSFAAECNALRNIRHRNLI 90
+G+G VY+G+ + VAVK L KE F +E ++N+ H +++
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIV 88
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
K+I I + I+ E L +L ++ L+ LT V ++ + A+ Y
Sbjct: 89 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYL 141
Query: 151 HH-HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
+C VH D+ NIL+ +GD GL++++ E + + + IK
Sbjct: 142 ESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPIK--- 191
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++PE + + + DV+ F + + E+ +
Sbjct: 192 -WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRH 86
T+ + IG+G S+V + + + A K++N K+ A + E R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVS 144
N++++ SI EGF + +VF+ + + G+L + + D S
Sbjct: 63 SNIVRLH---DSISEEGFHY--LVFDLV-----------TGGELFEDIVAREYYSEADAS 106
Query: 145 FAIEYFHH---HC-QPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAE 197
I+ HC Q +VH DLKP N+LL + + D GLA + G +
Sbjct: 107 HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG- 165
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 166 -------FAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 29/144 (20%)
Query: 108 AIVFEYMQNRNLEQWLRQ--SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS-IVHGDLK 164
A+VFEY+ N + +Q L Q ++ +RF + A+D +C I+H D+K
Sbjct: 116 ALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLKALD----------YCHSKGIMHRDVK 164
Query: 165 PSNILLD-QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGS 220
P N+++D Q + D GLA+F Y P S KG +V Y +Y +
Sbjct: 165 PHNVMIDHQQKKLRLIDWGLAEF---YHPAQEYNVRVASRYFKGPELLVDYQMYDYSL-- 219
Query: 221 KASVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M RR P
Sbjct: 220 ------DMWSLGCMLASMIFRREP 237
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 21/206 (10%)
Query: 38 IGQGGVSIVYKGIL---DESRSIVAVKVV-NLKQKEASRSFAAECNALRNIRHRNLIKII 93
IG+G V++GI + VA+K N F E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+ + + I+ E L +L+ L L + A +S A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFLQVRKFSLD-LASLILYAYQLSTALAYLESK 510
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
VH D+ N+L+ +GD GL++++ E T + + + IK ++A
Sbjct: 511 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMA 560
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMF 239
PE + + + DV+ FG+ + E+
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 160
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 213
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 214 ----DMWSLGCMLASMIFRKEP 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 38 IGQGGVSIVYKGILDESRSI---VAVKVV----NLKQKEASRSFAAECNALRNIRHRNLI 90
+G+G VY+G+ + VAVK L KE F +E ++N+ H +++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIV 76
Query: 91 KIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
K+I I + I+ E L +L ++ L+ LT V ++ + A+ Y
Sbjct: 77 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYL 129
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG 210
+ VH D+ NIL+ +GD GL++++ E + + + IK
Sbjct: 130 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPIK---- 179
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+++PE + + + DV+ F + + E+ +
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 159
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 212
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 213 ----DMWSLGCMLASMIFRKEP 230
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 158
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 159 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 211
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 212 ----DMWSLGCMLASMIFRKEP 229
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 159
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 212
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 213 ----DMWSLGCMLASMIFRKEP 230
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGS-KASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 109 IVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD 162
I EY +NR L E +Q + R Q + A+ Y H I+H D
Sbjct: 92 IQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILE-------ALSYIHSQ---GIIHRD 141
Query: 163 LKPSNILLDQDIVAHVGDLGLAKF------LFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
LKP NI +D+ +GD GLAK + + ++ N G YVA E
Sbjct: 142 LKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201
Query: 217 GMGS-KASVSGDVYNFGILLLEM 238
G+ + D+Y+ GI+ EM
Sbjct: 202 LDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 108 AIVFEYMQNRNLEQWLRQ-SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPS 166
A+VFE++ N + +Q + ++ +RF + A+D ++ I+H D+KP
Sbjct: 115 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---------GIMHRDVKPH 165
Query: 167 NILLDQDIVA-HVGDLGLAKFLFGYEPGTAAETASNSIEIKG---IVGYVAPEYGMGSKA 222
N+++D + + D GLA+F Y PG S KG +V Y +Y +
Sbjct: 166 NVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVASRYFKGPELLVDYQMYDYSL---- 218
Query: 223 SVSGDVYNFGILLLEMFTRRRP 244
D+++ G +L M R+ P
Sbjct: 219 ----DMWSLGCMLASMIFRKEP 236
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
SM Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLS 58
Query: 65 LKQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRN 118
+ A R++ E L++++H N+I ++ + + E F+ +V M N
Sbjct: 59 RPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 119 LEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV 178
+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 118 IVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKI 168
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGIL 234
D GLA+ E+ G V Y APE + + + D+++ G +
Sbjct: 169 LDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 235 LLEMFTRR 242
+ E+ T R
Sbjct: 215 MAELLTGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 77
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 137 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 188 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 234 AELLTGR 240
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 40/275 (14%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N F K+G G V +++ AVKVV K+ +RS E + L+ I++ ++
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR-NIKKYTRSAKIEADILKKIQNDDI 93
Query: 90 IKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQS-NGQLRFLTQRVNI-AIDVSFAI 147
+ F +D ++FE + E R + NG F + + + I++ A+
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNG---FHIEDIKLYCIEILKAL 150
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQD-------IVAHVGD-----------LGLAKFLFG 189
Y + S+ H DLKP NILLD V V D G+ F
Sbjct: 151 NYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDF- 206
Query: 190 YEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMF 249
G A + I Y APE + VS D+++FG +L E++T +F
Sbjct: 207 ---GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT----GSLLF 259
Query: 250 NEGLTLHEFVK-MALPDKVMEIVDPSLLLEVTANN 283
HE ++ +A+ + +++ + ++L E T N
Sbjct: 260 RT----HEHMEHLAMMESIIQPIPKNMLYEATKTN 290
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 76
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 77 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 135
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 136 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 186
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 187 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 233 AELLTGR 239
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 77
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 137 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 188 DFGLAR--------------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 234 AELLTGR 240
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 42 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 98
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
I E+ + NL +LR + FLT + + V+ +E+
Sbjct: 99 MVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 158 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WM 208
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 209 APETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 42 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 98
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
I E+ + NL +LR + FLT + + V+ +E+
Sbjct: 99 MVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + Y+ + +K ++
Sbjct: 158 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WM 208
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 209 APETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 27/217 (12%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRH 86
K P QG V + +L + ++ + Q A R++ E L+ + H
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNH 82
Query: 87 RNLIKIITICSSID-FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSF 145
+N+I ++ + + E F +V E M + NL Q + R + +
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERM----SYLLYQMLC 137
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
I++ H I+H DLKPSNI++ D + D GLA+ +N +
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------TACTNFMMT 183
Query: 206 KGIVG--YVAPE--YGMGSKASVSGDVYNFGILLLEM 238
+V Y APE GMG A+V D+++ G ++ E+
Sbjct: 184 PYVVTRYYRAPEVILGMGYAANV--DIWSVGCIMGEL 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-----ECNALRNIRHRNLIKI 92
IG+G S+V + I E+ AVK+V++ + +S + E + ++H +++++
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
+ SS +G + +VFE+M +L E R G + + + A+ Y
Sbjct: 92 LETYSS---DGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 151 HHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
H + +I+H D+KP N+LL + +GD G+A L G + A + G
Sbjct: 147 HDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-----GESGLVAGGRV---G 195
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++APE DV+ G++L + +
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 54/256 (21%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKII--- 93
++G G VYK E+ ++ A KV+ K +E + E L H ++K++
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 94 ----TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
+ I+F G AI+ E +R L + Q++ + +++ A++
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLEL--DRGL------TEPQIQVVCRQMLEALN------ 123
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
+ H I+H DLK N+L+ + GD+ LA F G +A+ +
Sbjct: 124 FLHSK---RIIHRDLKAGNVLMTLE-----GDIRLADF------GVSAKNLKTLQKRDSF 169
Query: 209 VG---YVAPEYGM-----GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+G ++APE M + D+++ GI L+EM P HE
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH----------HELNP 219
Query: 261 MALPDKVMEIVDPSLL 276
M + K+ + P+LL
Sbjct: 220 MRVLLKIAKSDPPTLL 235
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 101 FEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVH 160
F+ D V EY+ +L ++Q G+ + Q V A ++S + + H I++
Sbjct: 89 FQTVDRLYFVMEYVNGGDLMYHIQQV-GKFK-EPQAVFYAAEISIGLFFLHKR---GIIY 143
Query: 161 GDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGS 220
DLK N++LD + + D G+ K + E G Y+APE
Sbjct: 144 RDLKLDNVMLDSEGHIKIADFGMCK--------EHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 221 KASVSGDVYNFGILLLEMFTRRRPTDA 247
S D + +G+LL EM + P D
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLXGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLAGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 59
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 60 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 119 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 169
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 170 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 216 AELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 48/249 (19%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP G V + ++++ + V V L
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKKL 66
Query: 66 KQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNR 117
+ A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 67 SRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 125
Query: 118 NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH 177
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 126 NIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 176
Query: 178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGI 233
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 177 ILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 234 LLLEMFTRR 242
++ E+ T R
Sbjct: 223 IMAELLTGR 231
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 54/256 (21%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKII--- 93
++G G VYK E+ ++ A KV+ K +E + E L H ++K++
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 94 ----TICSSIDF-EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
+ I+F G AI+ E +R L + Q++ + +++ A++
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLEL--DRGL------TEPQIQVVCRQMLEALN------ 131
Query: 149 YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGI 208
+ H I+H DLK N+L+ + GD+ LA F G +A+ +
Sbjct: 132 FLHSK---RIIHRDLKAGNVLMTLE-----GDIRLADF------GVSAKNLKTLQKRDSF 177
Query: 209 VG---YVAPEYGM-----GSKASVSGDVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK 260
+G ++APE M + D+++ GI L+EM P HE
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH----------HELNP 227
Query: 261 MALPDKVMEIVDPSLL 276
M + K+ + P+LL
Sbjct: 228 MRVLLKIAKSDPPTLL 243
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 48/249 (19%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP G V + ++++ + V V L
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKKL 55
Query: 66 KQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNR 117
+ A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 56 SRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 114
Query: 118 NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH 177
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 115 NIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 165
Query: 178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGI 233
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 166 ILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 234 LLLEMFTRR 242
++ E+ T R
Sbjct: 212 IMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 48/249 (19%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP G V + ++++ + V V L
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAF-----DTKTGLRVAVKKL 74
Query: 66 KQK-----EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNR 117
+ A R++ E L++++H N+I ++ + + E F+ +V M
Sbjct: 75 SRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 133
Query: 118 NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAH 177
N+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D
Sbjct: 134 NIVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELK 184
Query: 178 VGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGI 233
+ D GLA+ E+ G V Y APE + + + D+++ G
Sbjct: 185 ILDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 234 LLLEMFTRR 242
++ E+ T R
Sbjct: 231 IMAELLTGR 239
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRH 86
T+ + ++G+G S+V + + + A K++N K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVS 144
N++++ SI EGF + +VF+ + + G+L + + D S
Sbjct: 63 PNIVRLH---DSISEEGFHY--LVFDLV-----------TGGELFEDIVAREYYSEADAS 106
Query: 145 FAIEYFH---HHCQ-PSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
I+ +HC IVH DLKP N+LL + + D GLA + G +
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG- 165
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 166 -------FAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 77
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 78 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 136
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 137 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 188 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 234 AELLTGR 240
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 91/218 (41%), Gaps = 35/218 (16%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRH 86
T+ + ++G+G S+V + + + A K++N K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVS 144
N++++ SI EGF + +VF+ + + G+L + + D S
Sbjct: 63 PNIVRLH---DSISEEGFHY--LVFDLV-----------TGGELFEDIVAREYYSEADAS 106
Query: 145 FAIEYFH---HHCQ-PSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
I+ +HC IVH DLKP N+LL + + D GLA + G +
Sbjct: 107 HCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG- 165
Query: 198 TASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 166 -------FAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H D+ N+LL VA +GD GLA+ + SN I +KG V ++AP
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWMAP 235
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +V DV+++GILL E+F+
Sbjct: 236 ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 68
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 69 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 127
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 128 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 178
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 179 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 224
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 225 AELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKXQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 103
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 160
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 211
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 29/206 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 53 IDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 109
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL----------RFLT--QRVNIAIDVSFAIEYFHHHC 154
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 110 MVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR- 167
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAP 214
+H DL NILL + V + D GLA+ + + + +K ++AP
Sbjct: 168 --KXIHRDLAARNILLSEKNVVKICDFGLARDI--XKDPDXVRKGDARLPLK----WMAP 219
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E ++ DV++FG+LL E+F+
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYV 212
+ +H D+ N+LL VA +GD GLA+ + SN I +KG V ++
Sbjct: 186 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWM 235
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE +V DV+++GILL E+F+
Sbjct: 236 APESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKXQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H D+ N+LL VA +GD GLA+ + SN I +KG V ++AP
Sbjct: 186 IHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWMAP 235
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E +V DV+++GILL E+F+
Sbjct: 236 ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 65
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 122
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 173
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA--SRSFAAECNALRNIRHR 87
+N+ + IG+G VY + VA+K VN ++ + E L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
+I++ + D FD IV E + + +L++ + FLT+ I + +
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTP----IFLTEEHIKTILYNLLL 140
Query: 148 -EYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
E F H + I+H DLKP+N LL+QD V D GLA+
Sbjct: 141 GENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYV 212
+ +H D+ N+LL VA +GD GLA+ + SN I +KG V ++
Sbjct: 180 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWM 229
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE +V DV+++GILL E+F+
Sbjct: 230 APESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLR 131
E L+N RH L + F+ D V EY L L + S + R
Sbjct: 197 TENRVLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 251
Query: 132 FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
F + A+D + H + ++V+ DLK N++LD+D + D GL K G +
Sbjct: 252 FYGAEIVSALD--------YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIK 301
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G +T + E Y+APE + + D + G+++ EM R P
Sbjct: 302 DGATMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 28/225 (12%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRH 86
+NF +G+G V + E+ + AVKV+ + Q + E L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSF 145
+ + C F+ D V E++ +L +++S RF R A ++
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIIS 135
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
A+ + H I++ DLK N+LLD H G LA F G E N +
Sbjct: 136 ALMFLH---DKGIIYRDLKLDNVLLD-----HEGHCKLADF------GMCKEGICNGVTT 181
Query: 206 KGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
G Y+APE + D + G+LL EM P +A
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 90
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 147
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 198
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 64
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 121
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 172
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 70
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 127
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 178
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI--RHRNLIKIITI 95
IG+G V++G VAVK+ + +++ RS+ E + + RH N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIA- 67
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC- 154
+ D + +V +Y ++ +L +L + + + + +A+ + + + H
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM---IKLALSTASGLAHLHMEIV 124
Query: 155 ----QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---- 206
+P+I H DLK NIL+ ++ + DLGLA ++A+++I+I
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHR 175
Query: 207 -GIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE S ++ D+Y G++ E+ R
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYV 212
+ +H D+ N+LL VA +GD GLA+ + SN I +KG V ++
Sbjct: 172 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWM 221
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE +V DV+++GILL E+F+
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 16/139 (11%)
Query: 109 IVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAI-DVSFAIEYFHHHCQPSIVHGDLKPSN 167
++ +Y+ L L Q RF V I + ++ A+E+ H + I++ D+K N
Sbjct: 136 LILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLEN 189
Query: 168 ILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE--YGMGSKASVS 225
ILLD + + D GL+K A+ + + G + Y+AP+ G S +
Sbjct: 190 ILLDSNGHVVLTDFGLSKEF-------VADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 226 GDVYNFGILLLEMFTRRRP 244
D ++ G+L+ E+ T P
Sbjct: 243 VDWWSLGVLMYELLTGASP 261
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DYGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLR 131
E L+N RH L + F+ D V EY L L + S + R
Sbjct: 200 TENRVLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 254
Query: 132 FLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYE 191
F + A+D + H + ++V+ DLK N++LD+D + D GL K G +
Sbjct: 255 FYGAEIVSALD--------YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIK 304
Query: 192 PGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
G +T + E Y+APE + + D + G+++ EM R P
Sbjct: 305 DGATMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRL 70
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQI 130
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 169
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEA---SRSFAAECNALRNIRHRNLIKIIT 94
IG G V + + +VA+K + L+ E + E L + H +++K++
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKI-LRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSN--GQLRFLTQRVNIAIDVSFAIEYFHH 152
I D E FD +V E + + + ++ R +L T N+ + ++Y H
Sbjct: 120 IVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLV----GVKYVH- 173
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
I+H DLKP+N L++QD V D GLA+ + E G +
Sbjct: 174 --SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNS 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 27/209 (12%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNIRHRN 88
F +G G S V + + AVK + LK KE+S E LR I+H N
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESS--IENEIAVLRKIKHEN 81
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
++ + I S + + + + +R +E+ + Q ++ A+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD-------AVY 134
Query: 149 YFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
Y H + IVH DLKP N+L D++ + D GL+K G TA
Sbjct: 135 YLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTAC----- 183
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
G GYVAPE S + D ++ G++
Sbjct: 184 -GTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 30/215 (13%)
Query: 29 TNNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR 85
++ + K+G G V + + R+I +K ++ S + E L+ +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVNIAIDV 143
H N++K+ FE +V E + L E LRQ ++ I V
Sbjct: 80 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEV----DAAVIMKQV 130
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETAS 200
Y H H +IVH DLKP N+LL+ +D + + D GL+ E
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---------EVGG 178
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
E G Y+APE + K DV++ G++L
Sbjct: 179 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVIL 212
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 51 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 107
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 108 MVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + + + +K ++
Sbjct: 167 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--XKDPDXVRKGDARLPLK----WM 217
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 218 APETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRL 70
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 169
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 170 --HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DAGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 42 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 98
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
IV E+ + NL +LR + FLT + + V+ +E+
Sbjct: 99 MVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + + + +K ++
Sbjct: 158 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--XKDPDXVRKGDARLPLK----WM 208
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 209 APETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRL 80
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 141 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 179
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 57 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 115
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 166
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 215
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYV 212
+ +H D+ N+LL VA +GD GLA+ + SN I +KG V ++
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM---------NDSNYI-VKGNARLPVKWM 227
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE +V DV+++GILL E+F+
Sbjct: 228 APESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D GLAK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRL 70
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 169
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+G V K ++ AVKV+N K K+ S + E L+ + H N++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFE 88
Query: 95 ICSSIDFEGFDFKAIVFE-YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA-IEYFHH 152
I D F IV E Y ++ +++ RF I F+ I Y H
Sbjct: 89 ILE--DSSSF---YIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHK 139
Query: 153 HCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H +IVH DLKP NILL ++D + D GL+ T + + + G
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDRIGTA 187
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE G+ DV++ G++L + + P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DRGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA---ECNALR 82
+K ++N+ ++G+G S+V + + + A K++N K K ++R F E R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 59
Query: 83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIA 140
++H N++++ SI E F + +VF+ + + G+L + +
Sbjct: 60 KLQHPNIVRLH---DSIQEESFHY--LVFDLV-----------TGGELFEDIVAREFYSE 103
Query: 141 IDVSFAIE-------YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
D S I+ Y H + IVH +LKP N+LL A + LA F G
Sbjct: 104 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAAVKLADF------G 152
Query: 194 TAAETASNSIE--IKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
A E + G GY++PE S D++ G++L
Sbjct: 153 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 3 PAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKV 62
P +D+ + + ++ + Y E + + + ++G+G V++ ++ AVK
Sbjct: 48 PETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 106
Query: 63 VNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQW 122
V L+ A C L + R I+ + ++ EG + I E ++ +L Q
Sbjct: 107 VRLEVFRVEELVA--CAGLSSPR------IVPLYGAVR-EG-PWVNIFMELLEGGSLGQL 156
Query: 123 LRQ-----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD-IVA 176
++Q + L +L Q + +EY H I+HGD+K N+LL D A
Sbjct: 157 IKQMGCLPEDRALYYLGQALE-------GLEYLHTR---RILHGDVKADNVLLSSDGSRA 206
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
+ D G A L +P ++ I G ++APE MG D+++ ++L
Sbjct: 207 ALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 263
Query: 237 EMFTRRRPTDAMFNEGLTL 255
M P F L L
Sbjct: 264 HMLNGCHPWTQYFRGPLCL 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 77 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 135
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 186
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G A T + E Y+APE +
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTPE------YLAPEIILSKG 235
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 236 YNKAVDWWALGVLIYEM 252
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA---ECNALR 82
+K ++N+ ++G+G S+V + + + A K++N K K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 60
Query: 83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIA 140
++H N++++ SI E F + +VF+ + + G+L + +
Sbjct: 61 KLQHPNIVRLH---DSIQEESFHY--LVFDLV-----------TGGELFEDIVAREFYSE 104
Query: 141 IDVSFAIE-------YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
D S I+ Y H + IVH +LKP N+LL A + LA F G
Sbjct: 105 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAAVKLADF------G 153
Query: 194 TAAETASNSIE--IKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
A E + G GY++PE S D++ G++L
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+G V K ++ AVKV+N K K+ S + E L+ + H N++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFE 88
Query: 95 ICSSIDFEGFDFKAIVFE-YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA-IEYFHH 152
I D F IV E Y ++ +++ RF I F+ I Y H
Sbjct: 89 ILE--DSSSF---YIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHK 139
Query: 153 HCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H +IVH DLKP NILL ++D + D GL+ T + + + G
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDRIGTA 187
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE G+ DV++ G++L + + P
Sbjct: 188 YYIAPEVLRGTYDE-KCDVWSAGVILYILLSGTPP 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 81
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 142 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------H 181
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
TA E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 182 TAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 KVADFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 77 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 135
Query: 108 --AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLK 164
+V EY+ + LR+ RF A + EY H +++ DLK
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 189
Query: 165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV 224
P N+L+DQ V D G AK + G + + G Y+APE + +
Sbjct: 190 PENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNK 238
Query: 225 SGDVYNFGILLLEM 238
+ D + G+L+ EM
Sbjct: 239 AVDWWALGVLIYEM 252
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 71 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 122
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 123 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 173
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 174 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 222
Query: 237 EM 238
EM
Sbjct: 223 EM 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE +A + L+ I H + +++ + + E F FK
Sbjct: 77 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 135
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 186
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 187 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 235
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 236 YNKAVDWWALGVLIYEM 252
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 81
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 142 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------H 181
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
TA E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 182 TAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF------LFGYEPGTAAETA 199
A+ Y H I+H DLKP NI +D+ +GD GLAK + + ++
Sbjct: 128 ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 200 SNSIEIKGIVGYVAPEYGMGS-KASVSGDVYNFGILLLEM 238
N G YVA E G+ + D+Y+ GI+ EM
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 81
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 142 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------H 181
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
TA E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 182 TAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 64 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 115
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 116 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 166
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 167 QVTDFGFAKRVKG-----------RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 215
Query: 237 EM 238
EM
Sbjct: 216 EM 217
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE +A + L+ I H + +++ + + E F FK
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 115
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 166
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 215
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE +A + L+ I H + +++ + + E F FK
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 115
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 166
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 215
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 44/248 (17%)
Query: 12 SMKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN 64
S Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 2 SHSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLS 58
Query: 65 LKQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRN 118
+ A R++ E L++++H N+I ++ + + E F+ +V M N
Sbjct: 59 RPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 117
Query: 119 LEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHV 178
+ + + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 118 IVKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGIL 234
D GLA+ E+ G V Y APE + + + D+++ G +
Sbjct: 169 LDFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 235 LLEMFTRR 242
+ E+ T R
Sbjct: 215 MAELLTGR 222
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE FA + L+ I H + +++ + + E + FK
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 51 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 109
Query: 108 --AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLK 164
+V EY+ + LR+ RF A + EY H +++ DLK
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 163
Query: 165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV 224
P N+L+DQ V D G AK + G + + G Y+APE + +
Sbjct: 164 PENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNK 212
Query: 225 SGDVYNFGILLLEM 238
+ D + G+L+ EM
Sbjct: 213 AVDWWALGVLIYEM 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 54 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 105
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K G G
Sbjct: 106 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGA 160
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+T + E Y+APE + + D + G+++ EM R P
Sbjct: 161 TMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 44/225 (19%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA---ECNALR 82
+K ++N+ ++G+G S+V + + + A K++N K K ++R F E R
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 83
Query: 83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIA 140
++H N+++ + SI E F + +VF+ + + G+L + +
Sbjct: 84 KLQHPNIVR---LHDSIQEESFHY--LVFDLV-----------TGGELFEDIVAREFYSE 127
Query: 141 IDVSFAIE-------YFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGY 190
D S I+ Y H + IVH +LKP N+LL + + D GLA +
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Query: 191 EPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
E G GY++PE S D++ G++L
Sbjct: 185 EAWHG---------FAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLK 164
+V EY+ + LR+ RF A + EY H +++ DLK
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV 224
P N+L+DQ V D G AK + G + + G Y+APE + +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 225 SGDVYNFGILLLEM 238
+ D + G+L+ EM
Sbjct: 218 AVDWWALGVLIYEM 231
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA---ECNALR 82
+K ++N+ ++G+G S+V + + + A K++N K K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 60
Query: 83 NIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIA 140
++H N++++ SI E F + +VF+ + + G+L + +
Sbjct: 61 KLQHPNIVRLH---DSIQEESFHY--LVFDLV-----------TGGELFEDIVAREFYSE 104
Query: 141 IDVSFAIE-------YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPG 193
D S I+ Y H + IVH +LKP N+LL A + LA F G
Sbjct: 105 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASK--AKGAAVKLADF------G 153
Query: 194 TAAETASNSIE--IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
A E + G GY++PE S D++ G++L + P
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 79 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 130
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 131 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 182 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 237 EM 238
EM
Sbjct: 231 EM 232
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 30/215 (13%)
Query: 29 TNNFSPANKIGQGG---VSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR 85
++ + K+G G V + + R+I +K ++ S + E L+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVNIAIDV 143
H N++K+ FE +V E + L E LRQ ++ I V
Sbjct: 63 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEV----DAAVIMKQV 113
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLD---QDIVAHVGDLGLAKFLFGYEPGTAAETAS 200
Y H H +IVH DLKP N+LL+ +D + + D GL+ E
Sbjct: 114 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---------EVGG 161
Query: 201 NSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
E G Y+APE + K DV++ G++L
Sbjct: 162 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVIL 195
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE FA + L+ I H + +++ + + E + FK
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 79 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 130
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 131 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 181
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 182 QVTDFGFAKRVKG-----------RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 230
Query: 237 EM 238
EM
Sbjct: 231 EM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE +A + L+ I H + +++ + + E F FK
Sbjct: 57 RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 115
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 166
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 167 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 215
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 216 YNKAVDWWALGVLIYEM 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE FA + L+ I H + +++ + + E + FK
Sbjct: 56 RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-YSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 3 PAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKV 62
P +D+ + + ++ + Y E + + + ++G+G V++ ++ AVK
Sbjct: 32 PETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKK 90
Query: 63 VNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQW 122
V L+ A C L + R I+ + ++ EG + I E ++ +L Q
Sbjct: 91 VRLEVFRVEELVA--CAGLSSPR------IVPLYGAVR-EG-PWVNIFMELLEGGSLGQL 140
Query: 123 LRQ-----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD-IVA 176
++Q + L +L Q + +EY H I+HGD+K N+LL D A
Sbjct: 141 IKQMGCLPEDRALYYLGQALE-------GLEYLHTR---RILHGDVKADNVLLSSDGSRA 190
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
+ D G A L +P ++ I G ++APE MG D+++ ++L
Sbjct: 191 ALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247
Query: 237 EMFTRRRPTDAMFNEGLTL 255
M P F L L
Sbjct: 248 HMLNGCHPWTQYFRGPLCL 266
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVPGGEMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 186
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 187 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLK 164
+V EY+ + LR+ RF A + EY H +++ DLK
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV 224
P N+L+DQ V D G AK + G + + G Y+APE + +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 225 SGDVYNFGILLLEM 238
+ D + G+L+ EM
Sbjct: 218 AVDWWALGVLIYEM 231
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVV--NLKQKEASRSFAAECNALRNIRHRNLIKIITI 95
IG GG + V + +VA+K++ N + R E AL+N+RH+++ ++ +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHV 76
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWL----RQSNGQLRFLTQRVNIAIDVSFAIEYFH 151
E + +V EY L ++ R S + R + +++ VS A+ Y H
Sbjct: 77 -----LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI-----VS-AVAYVH 125
Query: 152 HHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK---GI 208
H DLKP N+L D+ + D GL A + ++ G
Sbjct: 126 SQ---GYAHRDLKPENLLFDEYHKLKLIDFGLC----------AKPKGNKDYHLQTCCGS 172
Query: 209 VGYVAPEYGMG-SKASVSGDVYNFGILLLEMFTRRRPTD 246
+ Y APE G S DV++ GILL + P D
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D GLAK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 34/194 (17%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI-AIDVSFAIEYFHHHCQPSIVHGDLK 164
+V EY+ + LR+ RF A + EY H +++ DLK
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIG---RFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLK 168
Query: 165 PSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASV 224
P N+L+DQ V D G AK + G + + G Y+APE + +
Sbjct: 169 PENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNK 217
Query: 225 SGDVYNFGILLLEM 238
+ D + G+L+ EM
Sbjct: 218 AVDWWALGVLIYEM 231
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 57 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 108
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K G G
Sbjct: 109 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGA 163
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+T + E Y+APE + + D + G+++ EM R P
Sbjct: 164 TMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 20/170 (11%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 54 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 105
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K G G
Sbjct: 106 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGA 160
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+T + E Y+APE + + D + G+++ EM R P
Sbjct: 161 TMKTFCGTPE------YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
KVV LKQ E + + E L+ + L+K+ F+ +V EY+ +
Sbjct: 78 KVVKLKQIEHTLN---EKRILQAVNFPFLVKL-----EFSFKDNSNLYMVMEYVAGGEMF 129
Query: 121 QWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA 176
LR+ S RF A + EY H +++ DLKP N+L+DQ
Sbjct: 130 SHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI 180
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
V D G AK + G + + G Y+APE + + + D + G+L+
Sbjct: 181 QVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 237 EM 238
EM
Sbjct: 230 EM 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 25 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 80
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 140
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 141 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 179
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 180 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIIT 94
+G+G V K ++ AVKV+N K K+ S + E L+ + H N++K+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFE 88
Query: 95 ICSSIDFEGFDFKAIVFE-YMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA-IEYFHH 152
I D F IV E Y ++ +++ RF I F+ I Y H
Sbjct: 89 ILE--DSSSF---YIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHK 139
Query: 153 HCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
H +IVH DLKP NILL ++D + D GL+ T + + + G
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKDRIGTA 187
Query: 210 GYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
Y+APE G+ DV++ G++L + + P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMXGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP IG G V ++ VAVK ++ + A R++ E
Sbjct: 24 EVPERYQNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 79
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 140 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR------------ 178
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 71
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 132 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 170
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 171 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 54 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 105
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K
Sbjct: 106 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------- 153
Query: 195 AAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E S+ +K G Y+APE + + D + G+++ EM R P
Sbjct: 154 --EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 15 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 70
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 130
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 169
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 170 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DGGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 59 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 110
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K
Sbjct: 111 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------- 158
Query: 195 AAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E S+ +K G Y+APE + + D + G+++ EM R P
Sbjct: 159 --EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 54 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 105
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K
Sbjct: 106 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------- 153
Query: 195 AAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E S+ +K G Y+APE + + D + G+++ EM R P
Sbjct: 154 --EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 16 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 71
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 131
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 132 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 170
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 171 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 76 AECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQ 135
E L+N RH L + F+ D V EY L + S ++ F +
Sbjct: 54 TESRVLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERV-FTEE 105
Query: 136 RVNI-AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGT 194
R ++ A+EY H +V+ D+K N++LD+D + D GL K
Sbjct: 106 RARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------- 153
Query: 195 AAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E S+ +K G Y+APE + + D + G+++ EM R P
Sbjct: 154 --EGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 29/193 (15%)
Query: 31 NFSPANKIGQGGV-SIVYKGILDESRSIVAVKVVNLKQKEASRSFA-AECNALR-NIRHR 87
+F P + +G G +IVY+G+ D +R + +++ SFA E LR + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFD-NRDVAVKRIL-----PECFSFADREVQLLRESDEHP 78
Query: 88 NLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
N+I+ C+ D + F+ I E + L++++ Q + L + + + + +
Sbjct: 79 NVIRYF--CTEKDRQ---FQYIAIE-LCAATLQEYVEQKDFAHLGL-EPITLLQQTTSGL 131
Query: 148 EYFHHHCQPSIVHGDLKPSNILLDQ-----DIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+ H +IVH DLKP NIL+ I A + D GL K L + S
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-----AVGRHSFSRR 183
Query: 203 IEIKGIVGYVAPE 215
+ G G++APE
Sbjct: 184 SGVPGTEGWIAPE 196
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMXGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM 218
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 266
Query: 219 GSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM 218
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 268
Query: 219 GSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 17 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 72
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 132
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 133 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 171
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 172 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 3 PAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKV 62
P +D+ + + ++ + Y E + + + ++G+G V++ ++ AVK
Sbjct: 46 PETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKK 104
Query: 63 VNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQW 122
V L+ A C L + R I+ + ++ EG + I E ++ +L Q
Sbjct: 105 VRLEVFRVEELVA--CAGLSSPR------IVPLYGAVR-EG-PWVNIFMELLEGGSLGQL 154
Query: 123 LRQ-----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD-IVA 176
++Q + L +L Q + +EY H I+HGD+K N+LL D A
Sbjct: 155 IKQMGCLPEDRALYYLGQALE-------GLEYLHTR---RILHGDVKADNVLLSSDGSRA 204
Query: 177 HVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
+ D G A L +P ++ I G ++APE MG D+++ ++L
Sbjct: 205 ALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 261
Query: 237 EMFTRRRPTDAMFNEGLTL 255
M P F L L
Sbjct: 262 HMLNGCHPWTQYFRGPLCL 280
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 26 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 81
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 141
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 142 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 180
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 181 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR-----NLIK 91
K+G G S V+ + + VA+KVV + + + E L+++R+ N
Sbjct: 28 KLGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 92 IITICSSIDFEGFDFKAI--VFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
++ + G + I VFE + +L +W+ +SN Q L I V ++Y
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 145
Query: 150 FHHHCQPSIVHGDLKPSNILL 170
H C+ I+H D+KP NILL
Sbjct: 146 LHTKCR--IIHTDIKPENILL 164
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS-----RSFAAECNALRNI 84
F +G G VYKG+ V + V ++ +EA+ + E + ++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 109 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 159
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
I+ ++A E + + DV+++G+ + E+ T
Sbjct: 217 IK------WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 50/225 (22%)
Query: 33 SPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA---------LRN 83
SP + +G G V I S VA+K + SR F +E A L++
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIK-------KLSRPFQSEIFAKRAYRELLLLKH 79
Query: 84 IRHRN---LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVN-I 139
++H N L+ + T SS+ +DF +V +MQ L++ G L+F +++ +
Sbjct: 80 MQHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQTD-----LQKIMG-LKFSEEKIQYL 131
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
+ ++Y H +VH DLKP N+ +++D + D GLA+
Sbjct: 132 VYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------------- 174
Query: 200 SNSIEIKGIV---GYVAPEYGMG-SKASVSGDVYNFGILLLEMFT 240
E+ G V Y APE + + + D+++ G ++ EM T
Sbjct: 175 HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 24 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 79
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 140 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 178
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 18 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 73
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 133
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 134 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 172
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 173 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM 218
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 273
Query: 219 GSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 274 DRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF-LTQ 135
E LR +RH+N+I+++ + + + + +V EY E + S + RF + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCGMQE--MLDSVPEKRFPVCQ 110
Query: 136 RVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
+ +EY H IVH D+KP N+LL + LG+A+ L P A
Sbjct: 111 AHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL---HPFAA 164
Query: 196 AETASNSIEIKGIVGYVAPEY--GMGSKASVSGDVYNFGILLLEMFTRRRP 244
+T S +G + PE G+ + + D+++ G+ L + T P
Sbjct: 165 DDTCRTS---QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 74
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 134
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 135 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 173
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 58 VAVKVVNLKQKEASR-SFAAECNALRNI-RHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
VAVK++ K + R + +E + + H N++ ++ C+ G + ++FEY
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT---LSGPIY--LIFEYCC 132
Query: 116 NRNLEQWLRQ-----SNGQLRFLTQR----------------VNIAIDVSFAIEYFHHHC 154
+L +LR S ++ + Q+ + A V+ +E+
Sbjct: 133 YGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK- 191
Query: 155 QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVG 210
S VH DL N+L+ V + D GLA+ + + SN + ++G V
Sbjct: 192 --SCVHRDLAARNVLVTHGKVVKICDFGLARDIM---------SDSNYV-VRGNARLPVK 239
Query: 211 YVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++APE ++ DV+++GILL E+F+
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM 218
+H DL NILL + V + D GLA+ + Y+ + +K ++APE
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 275
Query: 219 GSKASVSGDVYNFGILLLEMFT 240
++ DV++FG+LL E+F+
Sbjct: 276 DRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA---AECNALRNIRHRN 88
FS +IG G VY + +VA+K ++ K+++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
I+ C + + +V EY + L L Q V IA A++
Sbjct: 116 TIQYRG-CYLREHTAW----LVMEYCLG-SASDLLEVHKKPL----QEVEIAAVTHGALQ 165
Query: 149 ---YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
Y H H +++H D+K NILL + + +GD G A + + +
Sbjct: 166 GLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------------APANXF 210
Query: 206 KGIVGYVAPEYGMG-SKASVSG--DVYNFGILLLEMFTRRRPTDAMFN 250
G ++APE + + G DV++ GI +E+ R+ P +FN
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMXGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR-----NLIK 91
K+G G S V+ + + VA+KVV + + + E L+++R+ N
Sbjct: 44 KLGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 92 IITICSSIDFEGFDFKAI--VFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
++ + G + I VFE + +L +W+ +SN Q L I V ++Y
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 161
Query: 150 FHHHCQPSIVHGDLKPSNILL 170
H C+ I+H D+KP NILL
Sbjct: 162 LHTKCR--IIHTDIKPENILL 180
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 42 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 97
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 158 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 196
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 197 --HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 24 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 79
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 139
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 140 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR------------ 178
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 179 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 50/210 (23%)
Query: 61 KVVNLKQKEASRSFA-------------------AECNALRNIRHRNLIKIITICSSIDF 101
KV+ +K+K R +A E L+N RH L + F
Sbjct: 24 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-----KYSF 78
Query: 102 EGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+ D V EY L L + S + RF + A+D + H + +
Sbjct: 79 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD--------YLHSEKN 130
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAP 214
+V+ DLK N++LD+D + D GL K E + +K G Y+AP
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCK-----------EGIKDGATMKXFCGTPEYLAP 179
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E + + D + G+++ EM R P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
+G G S V+ + + A+K + S E L+ I+H N++ + I
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI-- 74
Query: 98 SIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSF-------AIE 148
+E +V + + S G+L R L + V D S A++
Sbjct: 75 ---YESTTHYYLVMQLV-----------SGGELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 149 YFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
Y H + IVH DLKP N+L +++ + D GL+K E TA
Sbjct: 121 YLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTAC----- 168
Query: 206 KGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
G GYVAPE S + D ++ G++
Sbjct: 169 -GTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 53/231 (22%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECN 79
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-RFLTQRVN 138
LR + H N+I + + +E ++ E + S G+L FL Q+ +
Sbjct: 68 ILRQVLHHNVITLHDV-----YENRTDVVLILELV-----------SGGELFDFLAQKES 111
Query: 139 IAID--VSF------AIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKF 186
++ + SF + Y H I H DLKP NI LLD++I + H+ D GL
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL--- 165
Query: 187 LFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
A + +E K I G +VAPE + D+++ G++
Sbjct: 166 ---------AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 50/210 (23%)
Query: 61 KVVNLKQKEASRSFA-------------------AECNALRNIRHRNLIKIITICSSIDF 101
KV+ +K+K R +A E L+N RH L + F
Sbjct: 25 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-----KYSF 79
Query: 102 EGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+ D V EY L L + S + RF + A+D + H + +
Sbjct: 80 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD--------YLHSEKN 131
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAP 214
+V+ DLK N++LD+D + D GL K E + +K G Y+AP
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCK-----------EGIKDGATMKXFCGTPEYLAP 180
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E + + D + G+++ EM R P
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMXGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 97/242 (40%), Gaps = 38/242 (15%)
Query: 19 MISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVN----LKQKEASRSF 74
++ E+ ++F IG+G S V + ++ + A+K++N LK+ E S F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVS-CF 108
Query: 75 AAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL---- 130
E + L N R + ++ F+ ++ +V EY +L L + ++
Sbjct: 109 REERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEM 163
Query: 131 -RFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFG 189
RF + +AID + Y VH D+KP NILLD+ G + LA FG
Sbjct: 164 ARFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILLDR-----CGHIRLAD--FG 207
Query: 190 YEPGTAAETASNSIEIKGIVGYVAPE-------YGMGSKASVSGDVYNFGILLLEMFTRR 242
A+ S+ G Y++PE D + G+ EMF +
Sbjct: 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
Query: 243 RP 244
P
Sbjct: 268 TP 269
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 53/230 (23%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNA 80
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-RFLTQRVNI 139
LR + H N+I + + +E ++ E + S G+L FL Q+ ++
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELV-----------SGGELFDFLAQKESL 112
Query: 140 AID--VSF------AIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKFL 187
+ + SF + Y H I H DLKP NI LLD++I + H+ D GL
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL---- 165
Query: 188 FGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
A + +E K I G +VAPE + D+++ G++
Sbjct: 166 --------AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 44/207 (21%)
Query: 61 KVVNLKQKEASRSFA-------------------AECNALRNIRHRNLIKIITICSSIDF 101
KV+ +K+K R +A E L+N RH L + F
Sbjct: 23 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-----KYSF 77
Query: 102 EGFDFKAIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPS 157
+ D V EY L L + S + RF + A+D + H + +
Sbjct: 78 QTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD--------YLHSEKN 129
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
+V+ DLK N++LD+D + D GL K G + G + + E Y+APE
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPE------YLAPEVL 181
Query: 218 MGSKASVSGDVYNFGILLLEMFTRRRP 244
+ + D + G+++ EM R P
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKII 93
++G G V +G+ + + V + LKQ K + E + + + ++++I
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+C + + +V E L ++L ++ ++ + VS ++Y
Sbjct: 77 GVCQA------EALMLVMEMAGGGPLHKFLVGKREEIP-VSNVAELLHQVSMGMKYLE-- 127
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
+ + VH DL N+LL A + D GL+K L + A +A K + + A
Sbjct: 128 -EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-----KWPLKWYA 181
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEGLTLHEFVKMALPDKVMEIVD 272
PE K S DV+++G+ + E + ++P M +G + F++ K ME
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQG---KRMECPP 236
Query: 273 PSLLLEVTANNYSWIEDCLV 292
E Y+ + DC +
Sbjct: 237 -----ECPPELYALMSDCWI 251
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N +P +G G V ++ VAVK ++ + A R++ E
Sbjct: 29 EVPERYQNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRL 84
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 145 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR------------ 183
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 184 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
++ + V+ +E+ +H DL NILL ++ V + D GLA+ + Y+
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDI--YKNPDYV 256
Query: 197 ETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
+ +K ++APE S DV+++G+LL E+F+
Sbjct: 257 RKGDTRLPLK----WMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 53/230 (23%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNA 80
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-RFLTQRVNI 139
LR + H N+I + + +E ++ E + S G+L FL Q+ ++
Sbjct: 69 LRQVLHPNIITLHDV-----YENRTDVVLILELV-----------SGGELFDFLAQKESL 112
Query: 140 AID--VSF------AIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKFL 187
+ + SF + Y H I H DLKP NI LLD++I + H+ D GLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 188 FGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
+ +E K I G +VAPE + D+++ G++
Sbjct: 170 ------------EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ +M
Sbjct: 215 YNKAVDWWALGVLIYQM 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+K+++ ++ +EA + E L+ + H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 81 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 128 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 175
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 176 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+K+++ ++ +EA + E L+ + H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 75 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 121
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 122 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 169
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+K+++ ++ +EA + E L+ + H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 75 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 121
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 122 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 169
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 43 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 101
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 152
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+D+ V D G AK + G + + G Y+APE +
Sbjct: 153 DLKPENLLIDEQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIILSKG 201
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 202 YNKAVDWWALGVLIYEM 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMXGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 38 IGQGGVSIVYKGILDESR--SIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLI-KI 92
+G+G V + LD +R S VA+K++ K +EA+R E N L+ I+ ++ K
Sbjct: 27 LGEGTFGKVVE-CLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKEKDKENKF 82
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ + S F I FE + +N ++L+++N Q L ++A + A+ + H
Sbjct: 83 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH- 140
Query: 153 HCQPSIVHGDLKPSNILL-------------------DQDIVAHVGDLGLAKFLFGYEPG 193
+ + H DLKP NIL ++ V D G A F +
Sbjct: 141 --ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT 198
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
A E+ +G+ P DV++ G +L E +
Sbjct: 199 IVATRHYRPPEVILELGWAQP-----------CDVWSIGCILFEYY 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 31/208 (14%)
Query: 51 LDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI-RHRNLIKIITICSSIDFEGFDF 106
+D++ + V V LK+ R+ +E L +I H N++ ++ C+ G
Sbjct: 42 IDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPL 98
Query: 107 KAIVFEYMQNRNLEQWLRQSNGQL------------RFLT--QRVNIAIDVSFAIEYFHH 152
I E+ + NL +LR + FLT + + V+ +E+
Sbjct: 99 MVIT-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+H DL NILL + V + D GLA+ + + + +K ++
Sbjct: 158 R---KCIHRDLAARNILLSEKNVVKICDFGLARDI--XKDPDXVRKGDARLPLK----WM 208
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
APE ++ DV++FG+LL E+F+
Sbjct: 209 APETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 38 IGQGGVSIVYKGILDESR--SIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLI-KI 92
+G+G V + LD +R S VA+K++ K +EA+R E N L+ I+ ++ K
Sbjct: 36 LGEGTFGKVVE-CLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKEKDKENKF 91
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ + S F I FE + +N ++L+++N Q L ++A + A+ + H
Sbjct: 92 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH- 149
Query: 153 HCQPSIVHGDLKPSNILL-------------------DQDIVAHVGDLGLAKFLFGYEPG 193
+ + H DLKP NIL ++ V D G A F +
Sbjct: 150 --ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT 207
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
A E+ +G+ P DV++ G +L E +
Sbjct: 208 IVATRHYRPPEVILELGWAQP-----------CDVWSIGCILFEYY 242
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECN 79
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLT 134
LR + H N+I + + +E ++ E + L +L Q F+
Sbjct: 68 ILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK 122
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKFLFGY 190
Q ++ + Y H I H DLKP NI LLD++I + H+ D GL
Sbjct: 123 QILD-------GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL------- 165
Query: 191 EPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
A + +E K I G +VAPE + D+++ G++
Sbjct: 166 -----AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK-----EASRSFAAEC 78
E+ + SP G V Y + +S + + V L + A R++ E
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSY-----DVKSGLKIAVKKLSRPFQSIIHAKRTYR-EL 101
Query: 79 NALRNIRHRNLIKIITI-CSSIDFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQ 135
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL
Sbjct: 102 RLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 161
Query: 136 RVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTA 195
++ ++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 162 QI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 202
Query: 196 AETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + +++ D+++ G ++ E+ T R
Sbjct: 203 ----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYG 217
I+H D+KPSNILLD+ + D G++ G ++ + + + G Y+APE
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGIS--------GQLVDSIAKTRD-AGCRPYMAPERI 197
Query: 218 MGSKA----SVSGDVYNFGILLLEMFTRRRP 244
S + V DV++ GI L E+ T R P
Sbjct: 198 DPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFA---AECNALRNIRHRN 88
FS +IG G VY + +VA+K ++ K+++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 89 LIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIE 148
I+ C + + +V EY + L L Q V IA A++
Sbjct: 77 TIQYRG-CYLREHTAW----LVMEYCLG-SASDLLEVHKKPL----QEVEIAAVTHGALQ 126
Query: 149 ---YFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
Y H H +++H D+K NILL + + +GD G +A + +
Sbjct: 127 GLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG------------SASIMAPANXF 171
Query: 206 KGIVGYVAPEYGMG-SKASVSG--DVYNFGILLLEMFTRRRPTDAMFN 250
G ++APE + + G DV++ GI +E+ R+ P +FN
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP---LFN 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+K+++ ++ +EA + E L+ + H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 74 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 120
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 121 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 168
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 169 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+++DQ V D G AK + G + + G Y+APE +
Sbjct: 166 DLKPENLIIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPEIIISKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 53/231 (22%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECN 79
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-RFLTQRVN 138
LR + H N+I + + +E ++ E + S G+L FL Q+ +
Sbjct: 68 ILRQVLHHNVITLHDV-----YENRTDVVLILELV-----------SGGELFDFLAQKES 111
Query: 139 IAID--VSF------AIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKF 186
++ + SF + Y H I H DLKP NI LLD++I + H+ D GL
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL--- 165
Query: 187 LFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
A + +E K I G +VAPE + D+++ G++
Sbjct: 166 ---------AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 53/230 (23%)
Query: 27 KATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNA 80
K + + ++G G +IV K + A K + +Q ASR E +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 81 LRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-RFLTQRVNI 139
LR + H N+I + + +E ++ E + S G+L FL Q+ ++
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELV-----------SGGELFDFLAQKESL 112
Query: 140 AID--VSF------AIEYFHHHCQPSIVHGDLKPSNI-LLDQDI-VAHVG--DLGLAKFL 187
+ + SF + Y H I H DLKP NI LLD++I + H+ D GL
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL---- 165
Query: 188 FGYEPGTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
A + +E K I G +VAPE + D+++ G++
Sbjct: 166 --------AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+K+++ ++ +EA + E L+ + H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 75 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 121
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 122 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 169
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 170 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 59 AVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
AVKV++ +KQK S E L+ + H N++K+ +E F+ K + +
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--------YEFFEDKGYFYLVGE 112
Query: 116 NRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--- 171
+ + + RF I V I Y H + IVH DLKP N+LL+
Sbjct: 113 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 169
Query: 172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNF 231
+D + D GL+ T E + + G Y+APE G+ DV++
Sbjct: 170 KDANIRIIDFGLS---------THFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWST 219
Query: 232 GILL 235
G++L
Sbjct: 220 GVIL 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL---LNWCVQ 126
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 184 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG G S + + + AVKV++ +++ S LR +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDV-- 89
Query: 98 SIDFEGFDFKAIVFEYMQNRNL-EQWLRQSNGQLRFLTQRVN--IAIDVSFAIEYFHHHC 154
++ +V E M+ L ++ LRQ +F ++R + + +EY H
Sbjct: 90 ---YDDGKHVYLVTELMRGGELLDKILRQ-----KFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 155 QPSIVHGDLKPSNIL-LDQD---IVAHVGDLGLAKFLFGYEPG---TAAETASNSIEIKG 207
+VH DLKPSNIL +D+ + D G AK L E G T TA+
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENGLLMTPCYTAN------- 190
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+VAPE D+++ GILL M P
Sbjct: 191 ---FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 43/226 (19%)
Query: 38 IGQGGVSIVYKGILDESR--SIVAVKVVNL--KQKEASRSFAAECNALRNIRHRNLI-KI 92
+G+G V + LD +R S VA+K++ K +EA+R E N L+ I+ ++ K
Sbjct: 59 LGEGTFGKVVE-CLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKEKDKENKF 114
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ + S F I FE + +N ++L+++N Q L ++A + A+ + H
Sbjct: 115 LCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH- 172
Query: 153 HCQPSIVHGDLKPSNILL-------------------DQDIVAHVGDLGLAKFLFGYEPG 193
+ + H DLKP NIL ++ V D G A F +
Sbjct: 173 --ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT 230
Query: 194 TAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMF 239
A E+ +G+ P DV++ G +L E +
Sbjct: 231 IVATRHYRPPEVILELGWAQP-----------CDVWSIGCILFEYY 265
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 194
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 195 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 69
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 70 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 115
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 169
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 140 AIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETA 199
A + EY H +++ DLKP N+++DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 193
Query: 200 SNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
+ + G Y+APE + + + D + G+L+ EM
Sbjct: 194 -RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
D LA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 DFYLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 128
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 186 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 127
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 185 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQ--KEASRSFAAECNALRNIRHRNLIKIITI 95
IG+G VY G VA++++++++ ++ ++F E A R RH N++ +
Sbjct: 41 IGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
C S AI+ + R L +R + L R IA ++ + Y H
Sbjct: 98 CMSP-----PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-QIAQEIVKGMGYLH---A 148
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK-GIVGYVAP 214
I+H DLK N+ D V + D G LF A + + I+ G + ++AP
Sbjct: 149 KGILHKDLKSKNVFYDNGKVV-ITDFG----LFSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 215 EYGMGSKA---------SVSGDVYNFGILLLEMFTRRRP 244
E S DV+ G + E+ R P
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 59 AVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
AVKV++ +KQK S E L+ + H N++K+ +E F+ K + +
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--------YEFFEDKGYFYLVGE 106
Query: 116 NRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--- 171
+ + + RF I V I Y H + IVH DLKP N+LL+
Sbjct: 107 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 163
Query: 172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNF 231
+D + D GL+ T E + + G Y+APE G+ DV++
Sbjct: 164 KDANIRIIDFGLS---------THFEASKKMKDKIGTAYYIAPEVLHGTYDE-KCDVWST 213
Query: 232 GILL 235
G++L
Sbjct: 214 GVIL 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 76 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 126
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 127 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 184 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 36/262 (13%)
Query: 3 PAHKDSNMLSMKQQFPMISYA---ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVA 59
P +D+ + + ++ + Y E+ AT+ ++G+G V++ ++ A
Sbjct: 67 PKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCA 122
Query: 60 VKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL 119
VK V L+ A A C L + R I+ + ++ EG + I E ++ +L
Sbjct: 123 VKKVRLEVFRAEELMA--CAGLTSPR------IVPLYGAVR-EG-PWVNIFMELLEGGSL 172
Query: 120 EQWLRQS-----NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI 174
Q +++ + L +L Q + +EY H I+HGD+K N+LL D
Sbjct: 173 GQLVKEQGCLPEDRALYYLGQALE-------GLEYLHSR---RILHGDVKADNVLLSSDG 222
Query: 175 V-AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGI 233
A + D G A L +P ++ I G ++APE +G DV++
Sbjct: 223 SHAALCDFGHAVCL---QPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 234 LLLEMFTRRRPTDAMFNEGLTL 255
++L M P F L L
Sbjct: 280 MMLHMLNGCHPWTQFFRGPLCL 301
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 129
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 187 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICS 97
IG G S + + + AVKV++ +++ S LR +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKDV-- 89
Query: 98 SIDFEGFDFKAIVFEYMQNRNL-EQWLRQSNGQLRFLTQRVN--IAIDVSFAIEYFHHHC 154
++ +V E M+ L ++ LRQ +F ++R + + +EY H
Sbjct: 90 ---YDDGKHVYLVTELMRGGELLDKILRQ-----KFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 155 QPSIVHGDLKPSNIL-LDQD---IVAHVGDLGLAKFLFGYEPG---TAAETASNSIEIKG 207
+VH DLKPSNIL +D+ + D G AK L E G T TA+
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA-ENGLLMTPCYTAN------- 190
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
+VAPE D+++ GILL M P
Sbjct: 191 ---FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 171
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 107/260 (41%), Gaps = 29/260 (11%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNIRHRNLIKII 93
++G G V +G+ + + V + LKQ K + E + + + ++++I
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
+C + + +V E L ++L ++ ++ + VS ++Y
Sbjct: 403 GVCQA------EALMLVMEMAGGGPLHKFLVGKREEIP-VSNVAELLHQVSMGMKYLE-- 453
Query: 154 CQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
+ + VH +L N+LL A + D GL+K L + A +A K + + A
Sbjct: 454 -EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-----KWPLKWYA 507
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTR-RRPTDAMFNEGLTLHEFVKMALPDKVMEIVD 272
PE K S DV+++G+ + E + ++P M +G + F++ K ME
Sbjct: 508 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIEQG---KRMECPP 562
Query: 273 PSLLLEVTANNYSWIEDCLV 292
E Y+ + DC +
Sbjct: 563 -----ECPPELYALMSDCWI 577
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAECNALRNIRHRNLIKIITIC 96
+G+G V + + VAVK+V++K+ + + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY--- 70
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQP 156
EG + + + EY S G+L F +I + A +FH
Sbjct: 71 -GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 157 -------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV 209
I H D+KP N+LLD+ + D GLA +F Y E N ++ G +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCGTL 170
Query: 210 GYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
YVAPE + DV++ GI+L M P D
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 13 MKQQFPMISYAELSKAT-------NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNL 65
M Q+ P EL+K N SP +G G V ++ VAVK ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSR 57
Query: 66 KQK---EASRSFAAECNALRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNL 119
+ A R++ E L++++H N+I ++ + + E F+ +V M N+
Sbjct: 58 PFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 116
Query: 120 EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVG 179
+ + ++ ++FL ++ ++Y H I+H DLKPSN+ +++D +
Sbjct: 117 VKCQKLTDDHVQFLIYQI------LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 167
Query: 180 DLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILL 235
GLA+ E+ G V Y APE + + + D+++ G ++
Sbjct: 168 GFGLAR--------------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
Query: 236 LEMFTRR 242
E+ T R
Sbjct: 214 AELLTGR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 36/262 (13%)
Query: 3 PAHKDSNMLSMKQQFPMISYA---ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVA 59
P +D+ + + ++ + Y E+ AT+ ++G+G V++ ++ A
Sbjct: 48 PKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCA 103
Query: 60 VKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL 119
VK V L+ A A C L + R I+ + ++ EG + I E ++ +L
Sbjct: 104 VKKVRLEVFRAEELMA--CAGLTSPR------IVPLYGAVR-EG-PWVNIFMELLEGGSL 153
Query: 120 EQWLRQS-----NGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDI 174
Q +++ + L +L Q + +EY H I+HGD+K N+LL D
Sbjct: 154 GQLVKEQGCLPEDRALYYLGQALE-------GLEYLHSR---RILHGDVKADNVLLSSDG 203
Query: 175 V-AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGI 233
A + D G A L +P + I G ++APE +G DV++
Sbjct: 204 SHAALCDFGHAVCL---QPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 260
Query: 234 LLLEMFTRRRPTDAMFNEGLTL 255
++L M P F L L
Sbjct: 261 MMLHMLNGCHPWTQFFRGPLCL 282
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 146 AIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
+ Y H H +IVH DLKP N+LL ++D + + D GL+ E
Sbjct: 148 GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---------ENQKKM 195
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLL 236
E G Y+APE + K DV++ G++L
Sbjct: 196 KERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILF 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 59 AVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
AVKV++ +KQK S E L+ + H N++K+ +E F+ K + +
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--------YEFFEDKGYFYLVGE 130
Query: 116 NRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--- 171
+ + + RF I V I Y H + IVH DLKP N+LL+
Sbjct: 131 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 187
Query: 172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNF 231
+D + D GL+ T E + + G Y+APE G+ DV++
Sbjct: 188 KDANIRIIDFGLS---------THFEASKKMKDKIGTAYYIAPEVLHGTYDEKC-DVWST 237
Query: 232 GILL 235
G++L
Sbjct: 238 GVIL 241
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 69 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 119
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 120 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 177 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 72 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 122
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 123 IAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 180 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 59 AVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
AVKV++ +KQK S E L+ + H N++K+ +E F+ K + +
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL--------YEFFEDKGYFYLVGE 129
Query: 116 NRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--- 171
+ + + RF I V I Y H + IVH DLKP N+LL+
Sbjct: 130 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS 186
Query: 172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNF 231
+D + D GL+ T E + + G Y+APE G+ DV++
Sbjct: 187 KDANIRIIDFGLS---------THFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWST 236
Query: 232 GILL 235
G++L
Sbjct: 237 GVIL 240
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 128
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 186 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G Y+AP +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEYLAPAIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 128
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 186 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 128
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 129 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 186 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 132
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 190 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 81 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 131
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 132 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 189 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 127
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 185 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 52/226 (23%)
Query: 33 SPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNA---------LRN 83
SP + +G G V I S VA+K + SR F +E A L++
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIK-------KLSRPFQSEIFAKRAYRELLLLKH 97
Query: 84 IRHRN---LIKIITICSSI-DFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVN- 138
++H N L+ + T SS+ +F +DF +V +MQ L++ G + F +++
Sbjct: 98 MQHENVIGLLDVFTPASSLRNF--YDF-YLVMPFMQTD-----LQKIMG-MEFSEEKIQY 148
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+ + ++Y H +VH DLKP N+ +++D + D GLA+
Sbjct: 149 LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR------------- 192
Query: 199 ASNSIEIKGIV---GYVAPEYGMG-SKASVSGDVYNFGILLLEMFT 240
E+ G V Y APE + + + D+++ G ++ EM T
Sbjct: 193 -HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+++++ ++ +EA + E L+ + H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 200 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 246
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 247 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 294
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 295 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 85 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 135
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
I+ ++A E + + DV+++G+ + E+ T
Sbjct: 193 IK------WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 25/208 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITI-C 96
IG G +V++ L ES + KV+ K R E +R ++H N++ +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDK-----RFKNRELQIMRIVKHPNVVDLKAFFY 102
Query: 97 SSIDFEGFDFKAIVFEYMQN---RNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHH 153
S+ D + F +V EY+ R + + L + + S A Y H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA--YIHSI 160
Query: 154 CQPSIVHGDLKPSNILLDQDI-VAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
I H D+KP N+LLD V + D G AK L EP + + Y
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY---------YR 208
Query: 213 APEYGMGSKASVSG-DVYNFGILLLEMF 239
APE G+ + D+++ G ++ E+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELM 236
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 100 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 150
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 151 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 208 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 57/142 (40%), Gaps = 23/142 (16%)
Query: 109 IVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGD 162
I EY +NR L E +Q + R Q + A+ Y H I+H +
Sbjct: 92 IQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQ-------ILEALSYIHSQ---GIIHRN 141
Query: 163 LKPSNILLDQDIVAHVGDLGLAKF------LFGYEPGTAAETASNSIEIKGIVGYVAPEY 216
LKP NI +D+ +GD GLAK + + ++ N G YVA E
Sbjct: 142 LKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEV 201
Query: 217 GMGS-KASVSGDVYNFGILLLE 237
G+ + D Y+ GI+ E
Sbjct: 202 LDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 46/222 (20%)
Query: 35 ANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQ------KEASRSF--AAECNALRNIRH 86
+ +G G V ++ VA+++++ ++ +EA + E L+ + H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 87 RNLIKIITICSSIDFEGFDFKAIVFEYMQNRNL------EQWLRQSNGQLRFLTQRVNIA 140
+IKI + D+ IV E M+ L + L+++ +L F
Sbjct: 214 PCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFY------- 260
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAE 197
+ A++Y H + I+H DLKP N+LL ++D + + D G +K L E
Sbjct: 261 -QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--------GE 308
Query: 198 TASNSIEIKGIVGYVAPE--YGMGSKA-SVSGDVYNFGILLL 236
T+ + G Y+APE +G+ + + D ++ G++L
Sbjct: 309 TSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 35/152 (23%)
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL------DQDIVAHVGDLGLAKFLFGYEP 192
I+ + ++Y H C I+H D+KP N+L+ + I + DLG A +
Sbjct: 136 ISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY----- 188
Query: 193 GTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDAMF--N 250
E +NSI+ + Y +PE +G+ D+++ L+ E+ T D +F +
Sbjct: 189 ---DEHYTNSIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELIT----GDFLFEPD 238
Query: 251 EGLTLHEFVKMALPDKVMEIVD-----PSLLL 277
EG H + K D + +I++ PS LL
Sbjct: 239 EG---HSYTKDD--DHIAQIIELLGELPSYLL 265
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 19/108 (17%)
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL------DQDIVAHVGDLGLAKFLFGYEP 192
I+ + ++Y H C I+H D+KP N+L+ + I + DLG A +
Sbjct: 136 ISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY----- 188
Query: 193 GTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
E +NSI+ + Y +PE +G+ D+++ L+ E+ T
Sbjct: 189 ---DEHYTNSIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 32/241 (13%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVV---NLKQKEASRSFAAECNALRNIRH 86
++F +G+G VY +S IVA+KV+ ++++ E ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 87 RNLIKIITICSSIDFEGFDFKAI--VFEYMQNRNLEQWLRQSNGQLRFLTQRV-NIAIDV 143
N++++ +D + I + EY L + L++S F QR I ++
Sbjct: 83 PNILRLYNYF-------YDRRRIYLILEYAPRGELYKELQKS---CTFDEQRTATIMEEL 132
Query: 144 SFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
+ A+ Y H ++H D+KP N+LL + D G + + P +T
Sbjct: 133 ADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMC--- 182
Query: 204 EIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD-AMFNEGLTLHEFVKMA 262
G + Y+ PE G + D++ G+L E+ P + A NE T VK+
Sbjct: 183 ---GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE--TYRRIVKVD 237
Query: 263 L 263
L
Sbjct: 238 L 238
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 77 ECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRF-LTQ 135
E + L+++ H N+IK+ + FE + +V E+ + L Q + +F
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGEL---FEQIINRHKFDECD 147
Query: 136 RVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQD---IVAHVGDLGLAKFLFGYEP 192
NI + I Y H H +IVH D+KP NILL+ + + D GL+ F
Sbjct: 148 AANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF----- 199
Query: 193 GTAAETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGILL 235
S +++ +G Y+APE + K + DV++ G+++
Sbjct: 200 -------SKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWSCGVIM 237
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQK-EASRSFAAE-C-NALRNIRHRNLIKIIT 94
+G+G V + + VAVK+V++K+ + + E C NA+ N H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN--HENVVKFY- 71
Query: 95 ICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHC 154
EG + + + EY S G+L F +I + A +FH
Sbjct: 72 ---GHRREG-NIQYLFLEYC-----------SGGEL-FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 155 QP-------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
I H D+KP N+LLD+ + D GLA +F Y E N ++ G
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT-VFRY---NNRERLLN--KMCG 169
Query: 208 IVGYVAPEYGMGSKASVSG-DVYNFGILLLEMFTRRRPTD 246
+ YVAPE + DV++ GI+L M P D
Sbjct: 170 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 85/229 (37%), Gaps = 32/229 (13%)
Query: 14 KQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS 73
KQ +P + +++ ++G G +V++ + + A K V + +
Sbjct: 35 KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 94
Query: 74 FAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFL 133
E + +RH L+ + FE + +++E+M S G+L
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFM-----------SGGELFEK 138
Query: 134 TQRVNIAIDVSFAIEYFHHHC-------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
+ + A+EY C + + VH DLKP NI+ +L L F
Sbjct: 139 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF---TTKRSNELKLIDF 195
Query: 187 LFGYEPGTAAETASNSIEI-KGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
TA S+++ G + APE G D+++ G+L
Sbjct: 196 GL-----TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 142 DVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASN 201
D A+ + H +VH D+KP+NI L +GD GL E GTA +
Sbjct: 165 DTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLL-----VELGTA---GAG 213
Query: 202 SIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEM 238
++ +G Y+APE GS + + DV++ G+ +LE+
Sbjct: 214 EVQ-EGDPRYMAPELLQGSYGTAA-DVFSLGLTILEV 248
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 35/211 (16%)
Query: 36 NKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRNIRHRNLIKII 93
++G+G S+V + + + A K++N K+ A + E R ++H N++++
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 94 TICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAIDVSFAIEYFH 151
SI EG + ++F+ + + G+L + + D S I+
Sbjct: 88 ---DSISEEGHHY--LIFDLV-----------TGGELFEDIVAREYYSEADASHCIQQIL 131
Query: 152 H---HC-QPSIVHGDLKPSNILLDQDI---VAHVGDLGLAKFLFGYEPGTAAETASNSIE 204
HC Q +VH DLKP N+LL + + D GLA + G +
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-------- 183
Query: 205 IKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 184 FAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 61 KVVNLKQKEASRSFA------AECNALRNIRH----RNLIKIITICSSIDFEGFDFK--- 107
+V+ +K KE+ +A + L+ I H + +++ + + E F FK
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE-FSFKDNS 114
Query: 108 --AIVFEYMQNRNLEQWLRQ----SNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHG 161
+V EY+ + LR+ S RF A + EY H +++
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY------AAQIVLTFEYLH---SLDLIYR 165
Query: 162 DLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSK 221
DLKP N+L+DQ V D G AK + G + + G +APE +
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVKG-----------RTWXLCGTPEALAPEIILSKG 214
Query: 222 ASVSGDVYNFGILLLEM 238
+ + D + G+L+ EM
Sbjct: 215 YNKAVDWWALGVLIYEM 231
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 59 AVKVVN---LKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQ 115
AVKV++ +KQK S E L+ + H N+ K+ +E F+ K + +
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL--------YEFFEDKGYFYLVGE 106
Query: 116 NRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLD--- 171
+ + + RF I V I Y H + IVH DLKP N+LL+
Sbjct: 107 VYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKS 163
Query: 172 QDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNF 231
+D + D GL+ T E + + G Y+APE G+ DV++
Sbjct: 164 KDANIRIIDFGLS---------THFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWST 213
Query: 232 GILL 235
G++L
Sbjct: 214 GVIL 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECN 79
S +++ ++G G +IV K + A K + ++ +SR E N
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLRFLT 134
LR IRH N+I + I FE ++ E + L +L + + +FL
Sbjct: 61 ILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 115
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIV---AHVGDLGLAKFLFGY 190
Q ++ + Y H I H DLKP NI LLD+++ + D G+A +
Sbjct: 116 QILD-------GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--- 162
Query: 191 EPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
E + I G +VAPE + D+++ G++
Sbjct: 163 ------EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 85/229 (37%), Gaps = 32/229 (13%)
Query: 14 KQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRS 73
KQ +P + +++ ++G G +V++ + + A K V + +
Sbjct: 141 KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 200
Query: 74 FAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFL 133
E + +RH L+ + FE + +++E+M S G+L
Sbjct: 201 VRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFM-----------SGGELFEK 244
Query: 134 TQRVNIAIDVSFAIEYFHHHC-------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKF 186
+ + A+EY C + + VH DLKP NI+ +L L F
Sbjct: 245 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF---TTKRSNELKLIDF 301
Query: 187 LFGYEPGTAAETASNSIEI-KGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
TA S+++ G + APE G D+++ G+L
Sbjct: 302 GL-----TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECN 79
S +++ ++G G +IV K + A K + ++ +SR E N
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLRFLT 134
LR IRH N+I + I FE ++ E + L +L + + +FL
Sbjct: 82 ILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 136
Query: 135 QRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIV---AHVGDLGLAKFLFGY 190
Q ++ + Y H I H DLKP NI LLD+++ + D G+A +
Sbjct: 137 QILD-------GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--- 183
Query: 191 EPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
E + I G +VAPE + D+++ G++
Sbjct: 184 ------EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L + N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNL--MGGPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + N SP +G G V ++ VAVK ++ + A R++ E
Sbjct: 19 EVPERYQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRL 74
Query: 81 LRNIRHRNLIKIITICSSI-DFEGFDFKAIVFEYM--QNRNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F+ +V M N+ + + ++ ++FL ++
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQI 134
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GL +
Sbjct: 135 ------LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR------------ 173
Query: 198 TASNSIEIKGIVG---YVAPEYGMG-SKASVSGDVYNFGILLLEMFTRR 242
E+ G V Y APE + + + D+++ G ++ E+ T R
Sbjct: 174 --HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 30/254 (11%)
Query: 3 PAHKDSNMLS-MKQQFPMIS-YAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
P ++ N+L ++ P S ++ +F IG+G V L + + A+
Sbjct: 45 PLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAM 104
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++N K + R+ A R++ K IT F+ + +V +Y +L
Sbjct: 105 KILN-KWEMLKRAETACFREERDVLVNGDSKWITTLHYA-FQDDNNLYLVMDYYVGGDLL 162
Query: 121 QWLRQSNGQL-----RFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIV 175
L + +L RF + IAID + Y VH D+KP NIL+D +
Sbjct: 163 TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGH 213
Query: 176 AHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEY-----GMGSKASVSGDVYN 230
+ D G L E GT + + G Y++PE G + D ++
Sbjct: 214 IRLADFGSCLKLM--EDGTVQSSVA-----VGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 231 FGILLLEMFTRRRP 244
G+ + EM P
Sbjct: 267 LGVCMYEMLYGETP 280
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 39/220 (17%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRN 83
+++ ++G G +IV K + A K + ++ +SR E N LR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQ-----SNGQLRFLTQRVN 138
IRH N+I + I FE ++ E + L +L + + +FL Q ++
Sbjct: 72 IRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIV---AHVGDLGLAKFLFGYEPGT 194
+ Y H I H DLKP NI LLD+++ + D G+A +
Sbjct: 127 -------GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI------- 169
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
E + I G +VAPE + D+++ G++
Sbjct: 170 --EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHR-----NLIK 91
K+G G S V+ + + VA+KVV Q + E L+ +R N
Sbjct: 38 KLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD-EIKLLKCVRESDPSDPNKDM 96
Query: 92 IITICSSIDFEGFD--FKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEY 149
++ + G + +VFE + +L +W+ +SN Q + +I V ++Y
Sbjct: 97 VVQLIDDFKISGMNGIHVCMVFEVL-GHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDY 155
Query: 150 FHHHCQPSIVHGDLKPSNILL 170
H C+ I+H D+KP NIL+
Sbjct: 156 LHSKCK--IIHTDIKPENILM 174
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGM 218
H D+KP NIL+ D A++ D G+A T E + G + Y APE
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS-------ATTDEKLTQLGNTVGTLYYXAPERFS 208
Query: 219 GSKASVSGDVYNFGILLLEMFTRRRP--------TDAMFNEGLTLHEFVKMALP 264
S A+ D+Y +L E T P A N+ + V+ +P
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIP 262
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H DL NILL + + D GLA+ + + SN + +KG V ++AP
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHI---------KNDSNYV-VKGNARLPVKWMAP 239
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + DV+++GI L E+F+
Sbjct: 240 ESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNLXG--GPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNLXG--GPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNLXG--GPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 3 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 62
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 63 KILKPVKKKKIKREIKILQNLXG--GPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 117
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 118 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 168
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 169 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 219
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 220 MIFRKEP 226
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 93/218 (42%), Gaps = 25/218 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 129
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 130 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
I+ ++A E + + DV+++G+ + E+ T
Sbjct: 187 IK------WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/218 (19%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 127
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
I+ ++A E + + DV+++G+ + E+ T
Sbjct: 185 IK------WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
IE F +P+I H DLK NIL+ ++ + DLGLA + T N+ +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRV- 178
Query: 207 GIVGYVAPEYGMGSKASVSG-------DVYNFGILLLEMFTR 241
G Y+APE + V D++ FG++L E+ R
Sbjct: 179 GTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F + G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 132
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 190 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 127
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 185 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNL--CGGPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 133 LTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLF---- 188
+ +R+ + V+ ++ + ++H D+KPSNILLD+ + D G++ L
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 189 -GYEPGTAAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTDA 247
G AA A I+ P+Y + DV++ GI L+E+ T + P
Sbjct: 181 KDRSAGCAAYMAPERIDPPDP---TKPDY------DIRADVWSLGISLVELATGQFP--- 228
Query: 248 MFNEGLTLHEFVKMALPDKVMEIVDPSLL---LEVTANNYSWIEDCLV 292
+ T E + L + +P LL + + + S+++DCL
Sbjct: 229 -YKNCKTDFEVLTKVLQE------EPPLLPGHMGFSGDFQSFVKDCLT 269
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 23 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 82
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 83 KILKPVKKKKIKREIKILQNLXG--GPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 137
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 138 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 188
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 189 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 239
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 240 MIFRKEP 246
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + P G V Y L R VAVK ++ + A R++ E
Sbjct: 17 EVPQRLQGLRPVGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYR-ELRL 72
Query: 81 LRNIRHRNLIKIITI-CSSIDFEGFDFKAIVFEYMQN--RNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F +V M N+ + S+ ++FL ++
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 132
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAE 197
++Y H I+H DLKPSN+ +++D + D GLA+ A E
Sbjct: 133 ------LRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR--------QADE 175
Query: 198 TASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLEMF 239
+ + + Y APE + + + D+++ G ++ E+
Sbjct: 176 EMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 215
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 158 IVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVAP 214
I++ DLK N++LD + + D G+ K E + + K G Y+AP
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCK-----------ENIWDGVTTKXFCGTPDYIAP 511
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
E S D + FG+LL EM + P
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
IE F +P+I H DLK NIL+ ++ + DLGLA + T N+ +
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRV- 178
Query: 207 GIVGYVAPEYGMGSKASVSG-------DVYNFGILLLEMFTR 241
G Y+APE + V D++ FG++L E+ R
Sbjct: 179 GTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 157 SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVG---YVA 213
I++ DLK N++LD + + D G+ K E + + K G Y+A
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCK-----------ENIWDGVTTKXFCGTPDYIA 189
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
PE S D + FG+LL EM + P
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 147 IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIK 206
IE F +P+I H DLK NIL+ ++ + DLGLA + T N+ +
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRV- 207
Query: 207 GIVGYVAPEYGMGSKASVSG-------DVYNFGILLLEMFTR 241
G Y+APE + V D++ FG++L E+ R
Sbjct: 208 GTKRYMAPEV-LDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H DL NILL + + D GLA+ + + SN + +KG V ++AP
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDI---------KNDSNYV-VKGNARLPVKWMAP 232
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + DV+++GI L E+F+
Sbjct: 233 ESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H DL NILL + + D GLA+ + + SN + +KG V ++AP
Sbjct: 185 IHRDLAARNILLTHGRITKICDFGLARDI---------KNDSNYV-VKGNARLPVKWMAP 234
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + DV+++GI L E+F+
Sbjct: 235 ESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 2 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 61
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 62 KILKPVKKKKIKREIKILQNL--CGGPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 116
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 117 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 167
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 168 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 218
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 219 MIFRKEP 225
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 3 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 62
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 63 KILKPVKKKKIKREIKILQNL--CGGPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 117
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 118 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 168
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 169 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 219
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 220 MIFRKEP 226
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 26/247 (10%)
Query: 1 KKPAHKDSNMLSMKQQFPMISYAELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAV 60
K + D N+L K+ + + +++ K+G+G S V++GI + +
Sbjct: 4 KARVYADVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCII 63
Query: 61 KVVNLKQKEASRSFAAECNALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLE 120
K++ +K+ + L N++K++ I + +++FEY+ N + +
Sbjct: 64 KILKPVKKKKIKREIKILQNL--CGGPNIVKLLDIVRD---QHSKTPSLIFEYVNNTDFK 118
Query: 121 -QWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVA-HV 178
+ ++ +R+ + A+D H Q I+H D+KP N+++D ++ +
Sbjct: 119 VLYPTLTDYDIRYYIYELLKALDYC--------HSQ-GIMHRDVKPHNVMIDHELRKLRL 169
Query: 179 GDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPEYGMG-SKASVSGDVYNFGILLLE 237
D GLA+F Y PG S KG PE + S D+++ G +
Sbjct: 170 IDWGLAEF---YHPGKEYNVRVASRYFKG------PELLVDLQDYDYSLDMWSLGCMFAG 220
Query: 238 MFTRRRP 244
M R+ P
Sbjct: 221 MIFRKEP 227
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA----ECNALRNIRHRNLIKII 93
+G G V + + R+ V + L + S FA E L+++RH N+I ++
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 94 TICSSID-FEGFDFKAIVFEYMQNR--NLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
+ + + + F +V +M L + + +++FL ++ + Y
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQM------LKGLRYI 144
Query: 151 HHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIV- 209
H I+H DLKP N+ +++D + D GLA+ E+ G V
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--------------QADSEMXGXVV 187
Query: 210 --GYVAPEYGMG-SKASVSGDVYNFGILLLEMFT 240
Y APE + + + + D+++ G ++ EM T
Sbjct: 188 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 27/212 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIR-HRNLIKIITIC 96
+G+G SI K + +S AVK+++ K+ EA+ E AL+ H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS-KRMEANTQ--KEITALKLCEGHPNIVKL---- 71
Query: 97 SSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFL-TQRVNIAIDVSFAIEYFHHHCQ 155
E F + F M+ N + + + F T+ I + A+ + H
Sbjct: 72 ----HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH---D 124
Query: 156 PSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+VH DLKP N+L + ++ + D G A+ +P + + Y
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL----KPPDNQPLKTPCFTLH----YA 176
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFTRRRP 244
APE + S D+++ G++L M + + P
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H DL NILL + + D GLA+ + + SN + +KG V ++AP
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDI---------KNDSNYV-VKGNARLPVKWMAP 239
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + DV+++GI L E+F+
Sbjct: 240 ESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 38 IGQGGVSIVYKGIL----DESRSIVAVKVVNLK-QKEASRSFAAECNALRNIRHRNLIKI 92
+G G VYKGI + + VA+KV+ +A++ E + + + ++
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHH 152
+ IC + + +V + M L +R++ G+L +N + ++ + Y
Sbjct: 85 LGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGS-QDLLNWCMQIAKGMSYLED 137
Query: 153 HCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYV 212
+VH DL N+L+ + D GLA+ L ET ++ K + ++
Sbjct: 138 V---RLVHRDLAARNVLVKSPNHVKITDFGLARLL------DIDETEYHADGGKVPIKWM 188
Query: 213 APEYGMGSKASVSGDVYNFGILLLEMFT 240
A E + + + DV+++G+ + E+ T
Sbjct: 189 ALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 30/232 (12%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN 83
E+ +F IG+G V + + I A+K++N K + R+ A R+
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 126
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-----RFLTQRVN 138
+ + IT F+ + +V +Y +L L + +L RF +
Sbjct: 127 VLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+AID +I H+ VH D+KP N+LLD + + D G L + GT +
Sbjct: 186 LAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQSS 234
Query: 199 ASNSIEIKGIVGYVAPEY------GMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ G Y++PE GMG K D ++ G+ + EM P
Sbjct: 235 VA-----VGTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 19/208 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI-RHRNLIKIITIC 96
+G G VYKG ++ + A+KV+++ E E N L+ HRN+
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 97 SSIDFEGFDFK-AIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
+ G D + +V E+ ++ ++ + G I ++ + + H H
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 148
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++H D+K N+LL ++ + D G++ L T G ++APE
Sbjct: 149 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--------DRTVGRRNTFIGTPYWMAPE 199
Query: 216 Y-----GMGSKASVSGDVYNFGILLLEM 238
+ D+++ GI +EM
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 159 VHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG----IVGYVAP 214
+H DL NILL + + D GLA+ + + SN + +KG V ++AP
Sbjct: 167 IHRDLAARNILLTHGRITKICDFGLARDI---------KNDSNYV-VKGNARLPVKWMAP 216
Query: 215 EYGMGSKASVSGDVYNFGILLLEMFT 240
E + DV+++GI L E+F+
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + P G V Y L R VAVK ++ + A R++ E
Sbjct: 25 EVPQRLQGLRPVGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYR-ELRL 80
Query: 81 LRNIRHRNLIKIITI-CSSIDFEGFDFKAIVFEYMQN--RNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F +V M N+ + S+ ++FL ++
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL 140
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 141 ------LRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKGI-LDESRSI-VAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG+ + E + + V + L++ +A++ E + ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 132
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 190 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F +G G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 127
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D G AK L E AE
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 185 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-----ECNALRNIRHRNLIKI 92
IG+G S+V + I E+ AVK+V++ + +S + E + ++H +++++
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
+ SS +G + +VFE+M +L E R G + + + A+ Y
Sbjct: 92 LETYSS---DGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 151 HHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
H + +I+H D+KP +LL + +G G+A L G + A + G
Sbjct: 147 HDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-----GESGLVAGGRV---G 195
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++APE DV+ G++L + +
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F + G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 132
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 190 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 30 NNFSPANKIGQGGVSIVYKG--ILDESRSIVAVKVVNLKQ---KEASRSFAAECNALRNI 84
F + G VYKG I + + + V + L++ +A++ E + ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 85 RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAID 142
+ ++ +++ IC + + ++ + M L ++R+ + ++L +N +
Sbjct: 75 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL---LNWCVQ 125
Query: 143 VSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNS 202
++ + Y +VH DL N+L+ + D GLAK L E AE
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 203 IEIKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT-RRRPTDAM 248
I+ ++A E + + DV+++G+ + E+ T +P D +
Sbjct: 183 IK------WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 30/232 (12%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRN 83
E+ +F IG+G V + + I A+K++N K + R+ A R+
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 142
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL-----RFLTQRVN 138
+ + IT F+ + +V +Y +L L + +L RF +
Sbjct: 143 VLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
+AID +I H+ VH D+KP N+LLD + + D G L + GT +
Sbjct: 202 LAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTVQSS 250
Query: 199 ASNSIEIKGIVGYVAPEY------GMGSKASVSGDVYNFGILLLEMFTRRRP 244
+ G Y++PE GMG K D ++ G+ + EM P
Sbjct: 251 VA-----VGTPDYISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 24/233 (10%)
Query: 30 NNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNL 89
N + KIG GG ++Y A VV ++ +E F+ E + + ++
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFS-ELKFYQRVAKKDC 95
Query: 90 IKIITICSSIDFEGF---------DFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR--VN 138
IK +D+ G +FK + +M L L++ +GQ + +
Sbjct: 96 IKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQ 155
Query: 139 IAIDVSFAIEYFHHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEP-GT 194
+ I + +EY H + VHGD+K +N+LL + D V ++ D GL+ + Y P G
Sbjct: 156 LGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV-YLADYGLS---YRYCPNGN 208
Query: 195 AAETASNSIE-IKGIVGYVAPEYGMGSKASVSGDVYNFGILLLEMFTRRRPTD 246
+ N + G + + + + G S DV G +L + P +
Sbjct: 209 HKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWE 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-----ECNALRNIRHRNLIKI 92
IG+G S+V + I E+ AVK+V++ + +S + E + ++H +++++
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 93 ITICSSIDFEGFDFKAIVFEYMQNRNL--EQWLRQSNGQLRFLTQRVNIAIDVSFAIEYF 150
+ SS +G + +VFE+M +L E R G + + + A+ Y
Sbjct: 94 LETYSS---DGMLY--MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 151 HHHCQPSIVHGDLKPSNILL---DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKG 207
H + +I+H D+KP +LL + +G G+A L G + A + G
Sbjct: 149 HDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-----GESGLVAGGRV---G 197
Query: 208 IVGYVAPEYGMGSKASVSGDVYNFGILLLEMFT 240
++APE DV+ G++L + +
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Query: 24 ELSKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQK---EASRSFAAECNA 80
E+ + P G V Y L R VAVK ++ + A R++ E
Sbjct: 25 EVPQRLQGLRPVGSGAYGSVCSAYDARL---RQKVAVKKLSRPFQSLIHARRTYR-ELRL 80
Query: 81 LRNIRHRNLIKIITI-CSSIDFEGFDFKAIVFEYMQN--RNLEQWLRQSNGQLRFLTQRV 137
L++++H N+I ++ + + E F +V M N+ + S+ ++FL ++
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL 140
Query: 138 NIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAK 185
++Y H I+H DLKPSN+ +++D + D GLA+
Sbjct: 141 ------LRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 85/233 (36%), Gaps = 43/233 (18%)
Query: 29 TNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSF---------AAECN 79
+ +S + +G G V+ + E V VK + K+K + E
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKLGKVTLEIA 81
Query: 80 ALRNIRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNI 139
L + H N+IK++ I FE F +V E + +G F +
Sbjct: 82 ILSRVEHANIIKVLDI-----FENQGFFQLVME-----------KHGSGLDLFAFIDRHP 125
Query: 140 AIDVSFAIEYFHHHCQP-------SIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEP 192
+D A F I+H D+K NI++ +D + D G A +L E
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ER 182
Query: 193 GTAAETASNSIEIKGIVGYVAPEYGMGSK-ASVSGDVYNFGILLLEMFTRRRP 244
G T +IE Y APE MG+ ++++ G+ L + P
Sbjct: 183 GKLFYTFCGTIE------YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 36/222 (16%)
Query: 38 IGQGGVSIVYKGILD-ESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKII--- 93
+G+G V++G+ ES VAVK+ + + E S E +RH N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGES---VAVKIFS-SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 94 --TICSSIDF---EGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFA-- 146
+ SS + +++++Q + LE L R+ ++ A
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP----------HLALRLAVSAACGLAHL 121
Query: 147 -IEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEI 205
+E F +P+I H D K N+L+ ++ + DLGLA + G+ N+ +
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM---HSQGSDYLDIGNNPRV 178
Query: 206 KGIVGYVAPEYGMGS------KASVSGDVYNFGILLLEMFTR 241
G Y+APE ++ D++ FG++L E+ R
Sbjct: 179 -GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEAS--RSFAAECNALRN 83
++ T + ++G+G S+V + + + A ++N K+ A + E R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 84 IRHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQL--RFLTQRVNIAI 141
++H N++++ SI EG + ++F+ + + G+L + +
Sbjct: 67 LKHPNIVRLH---DSISEEGHHY--LIFDLV-----------TGGELFEDIVAREYYSEA 110
Query: 142 DVSFAIEYFHH---HC-QPSIVHGDLKPSNILLDQDI---VAHVGDLGLAKFLFGYEPGT 194
D S I+ HC Q +VH +LKP N+LL + + D GLA + G +
Sbjct: 111 DASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 195 AAETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGILL 235
G GY++PE D++ G++L
Sbjct: 171 FG--------FAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 157 SIVHGDLKPSNILLDQ-DIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
++ H D+KP N+L+++ D + D G AK L EP A + Y APE
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY---------YRAPE 201
Query: 216 YGMGSKASVSG-DVYNFGILLLEMFTRRRPTDAMFNEGLTLHEFVK-MALPDK-VMEIVD 272
G++ + D+++ G + EM P N LHE V+ + P + V+ ++
Sbjct: 202 LIFGNQHYTTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN 260
Query: 273 PS 274
PS
Sbjct: 261 PS 262
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 37 KIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNIRHRNLIKIITIC 96
K+G+G VYK + + + ++ S S E LR ++H N+I + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 97 SS---------IDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAI 147
S D+ D I+ + ++ ++ ++ G ++ L ++ +D I
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI---LD---GI 141
Query: 148 EYFHHHCQPSIVHGDLKPSNILL----DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSI 203
Y H + ++H DLKP+NIL+ + + D+G A+ + + ++
Sbjct: 142 HYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF-----NSPLKPLADLD 193
Query: 204 EIKGIVGYVAPEYGMGSKASVSG-DVYNFGILLLEMFT 240
+ Y APE +G++ D++ G + E+ T
Sbjct: 194 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-ECNALRNI-RHRNLIKIITI 95
IG+G V K + VA+K++ K K+A + A E L + +H +K +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
F + +VFE M + NL LR +N + L A + A+ F +
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL-LFLATPE 177
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
SI+H DLKP NILL + + + G++ + + Y +PE
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDF---------GSSCQLGQRIYQXIQSRFYRSPE 228
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
+G ++ D+++ G +L+EM T
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG E
Sbjct: 128 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 196 AETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
I G +VAPE + D+++ G++
Sbjct: 177 ---------IFGTPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-ECNALRNI-RHRNLIKIITI 95
IG+G V K + VA+K++ K K+A + A E L + +H +K +
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 100
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
F + +VFE M + NL LR +N + L A + A+ F +
Sbjct: 101 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL-LFLATPE 158
Query: 156 PSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVAPE 215
SI+H DLKP NILL + + + G++ + + Y +PE
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDF---------GSSCQLGQRIYQXIQSRFYRSPE 209
Query: 216 YGMGSKASVSGDVYNFGILLLEMFT 240
+G ++ D+++ G +L+EM T
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHT 234
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 19/207 (9%)
Query: 38 IGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAA-ECNALRNI-RHRNLIKIITI 95
IG+G V K + VA+K++ K K+A + A E L + +H +K +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKII--KNKKAFLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 96 CSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQRVNIAIDVSFAIEYFHHHCQ 155
F + +VFE M + NL LR +N + L A + A+ F +
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL-LFLATPE 177
Query: 156 PSIVHGDLKPSNILL--DQDIVAHVGDLGLAKFLFGYEPGTAAETASNSIEIKGIVGYVA 213
SI+H DLKP NILL + + D G++ + + Y +
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDF-----------GSSCQLGQRIYQXIQSRFYRS 226
Query: 214 PEYGMGSKASVSGDVYNFGILLLEMFT 240
PE +G ++ D+++ G +L+EM T
Sbjct: 227 PEVLLGMPYDLAIDMWSLGCILVEMHT 253
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 32/197 (16%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI- 84
S+ T F KIG G V+K + I A+K + K+ E NALR +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 85 ------RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR-- 136
+H ++++ + + D I EY +L + ++ + + +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
++ + V + Y H S+VH D+KPSNI + + + + E G
Sbjct: 118 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAAS----------EEGDED 164
Query: 197 ETASNSIEIK-GIVGYV 212
+ ASN + K G +G+V
Sbjct: 165 DWASNKVMFKIGDLGHV 181
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 32/197 (16%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI- 84
S+ T F KIG G V+K + I A+K + K+ E NALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 85 ------RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR-- 136
+H ++++ + + D I EY +L + ++ + + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
++ + V + Y H S+VH D+KPSNI + + + + E G
Sbjct: 116 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAAS----------EEGDED 162
Query: 197 ETASNSIEIK-GIVGYV 212
+ ASN + K G +G+V
Sbjct: 163 DWASNKVMFKIGDLGHV 179
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 32/197 (16%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI- 84
S+ T F KIG G V+K + I A+K + K+ E NALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 85 ------RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR-- 136
+H ++++ + + D I EY +L + ++ + + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
++ + V + Y H S+VH D+KPSNI + + + + E G
Sbjct: 116 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAAS----------EEGDED 162
Query: 197 ETASNSIEIK-GIVGYV 212
+ ASN + K G +G+V
Sbjct: 163 DWASNKVMFKIGDLGHV 179
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 32/197 (16%)
Query: 26 SKATNNFSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASRSFAAECNALRNI- 84
S+ T F KIG G V+K + I A+K + K+ E NALR +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 85 ------RHRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNGQLRFLTQR-- 136
+H ++++ + + D I EY +L + ++ + + +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAEDDH-----MLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 137 VNIAIDVSFAIEYFHHHCQPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAA 196
++ + V + Y H S+VH D+KPSNI + + + + E G
Sbjct: 114 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAAS----------EEGDED 160
Query: 197 ETASNSIEIK-GIVGYV 212
+ ASN + K G +G+V
Sbjct: 161 DWASNKVMFKIGDLGHV 177
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG
Sbjct: 128 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----- 172
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
E K I G +VAPE + D+++ G++
Sbjct: 173 --------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 41/219 (18%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG E
Sbjct: 128 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN- 176
Query: 196 AETASNSIEIKGIVGYVAPEYGMGSKASVSGDVYNFGIL 234
I G +VAPE + D+++ G++
Sbjct: 177 ---------IFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 72 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG
Sbjct: 127 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----- 171
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
E K I G +VAPE + D+++ G++
Sbjct: 172 --------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG
Sbjct: 128 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----- 172
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
E K I G +VAPE + D+++ G++
Sbjct: 173 --------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 147 IEYFHHHC--------QPSIVHGDLKPSNILLDQDIVAHVGDLGLAKFLFGYEPGTAAET 198
I+YF +H + +VH DL P NILL + + D LA+ TA
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR------EDTADAN 189
Query: 199 ASNSIEIKGIVGYVAPEYGMGSKASVS-GDVYNFGILLLEMFTRR 242
++ + + Y APE M K D+++ G ++ EMF R+
Sbjct: 190 KTHYVTHR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 47/222 (21%)
Query: 32 FSPANKIGQGGVSIVYKGILDESRSIVAVKVVNLKQKEASR------SFAAECNALRNIR 85
+ ++G G ++V K + A K + ++ ++SR E + L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 86 HRNLIKIITICSSIDFEGFDFKAIVFEYMQNRNLEQWLRQSNG-----QLRFLTQRVNIA 140
H N+I + + +E ++ E + L +L + FL Q +N
Sbjct: 73 HPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 141 IDVSFAIEYFHHHCQPSIVHGDLKPSNI-LLDQDIVA---HVGDLGLA-KFLFGYEPGTA 195
Y+ H Q I H DLKP NI LLD+++ + D GLA K FG
Sbjct: 128 --------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----- 172
Query: 196 AETASNSIEIKGIVG---YVAPEYGMGSKASVSGDVYNFGIL 234
E K I G +VAPE + D+++ G++
Sbjct: 173 --------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,063,182
Number of Sequences: 62578
Number of extensions: 352327
Number of successful extensions: 2989
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 1250
Number of HSP's gapped (non-prelim): 1098
length of query: 331
length of database: 14,973,337
effective HSP length: 99
effective length of query: 232
effective length of database: 8,778,115
effective search space: 2036522680
effective search space used: 2036522680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)